Citrus Sinensis ID: 047874
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 941 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LY77 | 1033 | Calcium-transporting ATPa | yes | no | 0.976 | 0.889 | 0.660 | 0.0 | |
| Q9LIK7 | 1017 | Putative calcium-transpor | no | no | 0.975 | 0.902 | 0.656 | 0.0 | |
| Q9LF79 | 1074 | Calcium-transporting ATPa | no | no | 0.968 | 0.848 | 0.562 | 0.0 | |
| Q9SZR1 | 1069 | Calcium-transporting ATPa | no | no | 0.968 | 0.852 | 0.564 | 0.0 | |
| Q9LU41 | 1086 | Calcium-transporting ATPa | no | no | 0.974 | 0.844 | 0.559 | 0.0 | |
| Q9M2L4 | 1025 | Putative calcium-transpor | no | no | 0.961 | 0.882 | 0.474 | 0.0 | |
| Q2RAS0 | 1017 | Probable calcium-transpor | no | no | 0.956 | 0.884 | 0.478 | 0.0 | |
| Q2QY12 | 1039 | Probable calcium-transpor | no | no | 0.954 | 0.864 | 0.477 | 0.0 | |
| O22218 | 1030 | Calcium-transporting ATPa | no | no | 0.970 | 0.886 | 0.465 | 0.0 | |
| Q37145 | 1020 | Calcium-transporting ATPa | no | no | 0.959 | 0.885 | 0.471 | 0.0 |
| >sp|Q9LY77|ACA12_ARATH Calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana GN=ACA12 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1202 bits (3111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/928 (66%), Positives = 757/928 (81%), Gaps = 9/928 (0%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L +++K K + LGGV VA+ L + GI G+E ++ R ++FG N Y KPP K
Sbjct: 93 LVEIMKGKDLPGIQALGGVEGVAASLRTNPTKGIHGNEQEVSRRRDLFGSNTYHKPPPKG 152
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNF 121
+ FV+EAFKD TI+ILLVCA+ SLGFGIK+ G+KEGW++GGSI AVFLV+ VSA+SNF
Sbjct: 153 LLFFVYEAFKDLTILILLVCAIFSLGFGIKEHGIKEGWYEGGSIFVAVFLVIVVSALSNF 212
Query: 122 KQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
+Q RQF L+ S++I+VEV+RD RR+ +SIFDVVVG+VV LK GDQIPADGLFL GHSL
Sbjct: 213 RQERQFDKLSKISNNIKVEVLRDSRRQHISIFDVVVGDVVFLKIGDQIPADGLFLEGHSL 272
Query: 182 KVDESSMTGESDRVEVDEK-NPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELN 240
+VDESSMTGESD +EVD K NPFL SGTK+ G+ MLV SVGMST WG+ MSSI+ + +
Sbjct: 273 QVDESSMTGESDHLEVDHKDNPFLFSGTKIVDGFAQMLVVSVGMSTTWGQTMSSINQDSS 332
Query: 241 EETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVM 300
E TPLQ RL+ LTS IGKIGLTVA LVL V+L+RYFTGNT + GKRE+ G KT D V+
Sbjct: 333 ERTPLQVRLDTLTSTIGKIGLTVAALVLVVLLVRYFTGNT-EKEGKREYNGSKTPVDTVV 391
Query: 301 NSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTIC 360
NSV+ I+AAAVTI+VVAIPEGLPLAVTLTLA+SMKRMM D AMVRKLSACETMGSAT IC
Sbjct: 392 NSVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMSDQAMVRKLSACETMGSATVIC 451
Query: 361 TDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLS 420
TDKTGTLTLN+MKVT+FWLG+E++ D+ + ++ ++ +LL + GLNTTG+V S+S S
Sbjct: 452 TDKTGTLTLNEMKVTKFWLGQESIHEDSTKM-ISPDVLDLLYQGTGLNTTGSVCVSDSGS 510
Query: 421 TSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFH 480
T E +GSPTEKA+LSW +++LGM+++ KQ V+ VE F+S KKRSGVL++R ++ H
Sbjct: 511 TPEFSGSPTEKALLSWTVLNLGMDMESVKQKHEVLRVETFSSAKKRSGVLVRRKSDNTVH 570
Query: 481 THWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEA 540
HWKGAAEM+L MCSHYY +G++ ++D +++I+ IIQ MAA SLRCIAFAH K A
Sbjct: 571 VHWKGAAEMVLAMCSHYYTSTGSVDLMDSTAKSRIQAIIQGMAASSLRCIAFAH-KIASN 629
Query: 541 DGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIE 600
D LEE GLTL+G+VGLKDPCRPGV AVE+C+ AGV +KM+TGDNV TA+AIA E
Sbjct: 630 DSV----LEEDGLTLMGIVGLKDPCRPGVSKAVETCKLAGVTIKMITGDNVFTAKAIAFE 685
Query: 601 CGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGH 660
CGIL+ + D ++++AV+EGVQFR+ + EER+ K++ IRVMARSSP DKLLMV+ L+ KGH
Sbjct: 686 CGILDHN-DKDEEDAVVEGVQFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLKGH 744
Query: 661 VVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYN 720
VVAVTGDGTNDAPAL+ ADIGLSMGIQGTEVAKESSDIVI+DDNF+SV TVL+WGRCVYN
Sbjct: 745 VVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYN 804
Query: 721 NIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTND 780
NIQKF+QFQLTVNVAALVINF AA+S+G+VPLTAVQLLWVNLIMDTLGALALATE+PTN+
Sbjct: 805 NIQKFIQFQLTVNVAALVINFIAAISAGEVPLTAVQLLWVNLIMDTLGALALATERPTNE 864
Query: 781 LMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFNTFV 840
L+ + PVGR++ LIT +MWRNL+ Q++YQ+A+LL LQFKG SI V++ VKDT+IFNTFV
Sbjct: 865 LLKRKPVGRTEALITNVMWRNLLVQSLYQIAVLLILQFKGMSIFSVRKEVKDTLIFNTFV 924
Query: 841 LCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERLNWGQW 900
LCQ+FNEFNAR++EKKN+FKG+H+N+LF+ II ITI LQ++MVEFLK FADT RLN QW
Sbjct: 925 LCQVFNEFNAREMEKKNVFKGLHRNRLFIGIIAITIVLQVIMVEFLKKFADTVRLNGWQW 984
Query: 901 AACIGIAAMSWPIGFLIKCIPVSGKQLL 928
CI +A++SWPIGF K IPVS L
Sbjct: 985 GTCIALASLSWPIGFFTKFIPVSETPFL 1012
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|Q9LIK7|ACA13_ARATH Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana GN=ACA13 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1175 bits (3040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/930 (65%), Positives = 750/930 (80%), Gaps = 12/930 (1%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L+ +VK K+ E L +LGG N + S L +T+ GI ++ R + FG N Y + P+K
Sbjct: 88 LNDLVKNKNQEKLESLGGPNGLVSALKSNTRLGINEEGDEIQRRRSTFGSNTYTRQPSKG 147
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNF 121
FV EAFKD TI+ILL CA LSLGFGIK+ GLKEGW+DGGSI AVFLVV+VSAVSNF
Sbjct: 148 LFHFVVEAFKDLTILILLGCATLSLGFGIKEHGLKEGWYDGGSIFVAVFLVVAVSAVSNF 207
Query: 122 KQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
+Q+RQF L+ SS+I+++VVR+GRR+ +SIFD+VVG++VCL GDQ+PADG+F+ GH L
Sbjct: 208 RQNRQFDKLSKVSSNIKIDVVRNGRRQEISIFDIVVGDIVCLNIGDQVPADGVFVEGHLL 267
Query: 182 KVDESSMTGESDRVEVD-EKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELN 240
VDESSMTGESD VEV N FL SGTK+ G+G M VTSVGM+TAWG+MMS IS + N
Sbjct: 268 HVDESSMTGESDHVEVSLTGNTFLFSGTKIADGFGKMAVTSVGMNTAWGQMMSHISRDTN 327
Query: 241 EETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVM 300
E+TPLQ+RL+KLTS IGK+GL VA LVL V+LIRYFTG T+D G RE+ G TK D+++
Sbjct: 328 EQTPLQSRLDKLTSSIGKVGLLVAFLVLLVLLIRYFTGTTKDESGNREYNGKTTKSDEIV 387
Query: 301 NSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTIC 360
N+V+ ++AAAVTIIVVAIPEGLPLAVTLTLA+SMKRMMKD+AMVRKLSACETMGSAT IC
Sbjct: 388 NAVVKMVAAAVTIIVVAIPEGLPLAVTLTLAYSMKRMMKDNAMVRKLSACETMGSATVIC 447
Query: 361 TDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLS 420
TDKTGTLTLNQMKVT+FW G E+ K+ + S Q + EL + V +NTTG+V+ + + +
Sbjct: 448 TDKTGTLTLNQMKVTDFWFGLESGKASSVS----QRVVELFHQGVAMNTTGSVFKAKAGT 503
Query: 421 TSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKR--INEKV 478
E +GSPTEKAILSWA+ +L M +++ + V++VE FNSEKKRSGVLMK+ +N +
Sbjct: 504 EYEFSGSPTEKAILSWAVEELEMGMEKVIEEHDVVHVEGFNSEKKRSGVLMKKKGVNTEN 563
Query: 479 FHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAA 538
HWKGAAE IL MCS + SG +R + +++ Q EKIIQ MAAKSLRCIAFA+++
Sbjct: 564 NVVHWKGAAEKILAMCSTFCDGSGVVREMKEDDKIQFEKIIQSMAAKSLRCIAFAYSE-- 621
Query: 539 EADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIA 598
D + +KL+E L+LLG++G+KDPCRPGV+ AVE C+ AGVN+KM+TGDN+ TARAIA
Sbjct: 622 --DNEDNKKLKEEKLSLLGIIGIKDPCRPGVKKAVEDCQFAGVNIKMITGDNIFTARAIA 679
Query: 599 IECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQK 658
+ECGIL P+ ++N EAV+EG +FR+ + EER+ K+E I+VMARSSP DKLLMV+ LK+
Sbjct: 680 VECGILTPEDEMN-SEAVLEGEKFRNYTQEERLEKVERIKVMARSSPFDKLLMVKCLKEL 738
Query: 659 GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCV 718
GHVVAVTGDGTNDAPAL+ ADIGLSMGIQGTEVAKESSDIVI+DDNF+SV TVL+WGRCV
Sbjct: 739 GHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCV 798
Query: 719 YNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPT 778
YNNIQKF+QFQLTVNVAALVINF AAVS+G VPLTAVQLLWVNLIMDTLGALALATE+PT
Sbjct: 799 YNNIQKFIQFQLTVNVAALVINFVAAVSAGDVPLTAVQLLWVNLIMDTLGALALATEKPT 858
Query: 779 NDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFNT 838
NDLM K P+GR PLIT IMWRNL++QA YQ+++LL LQF+GRSI V E VK+T+IFNT
Sbjct: 859 NDLMKKKPIGRVAPLITNIMWRNLLAQAFYQISVLLVLQFRGRSIFNVTEKVKNTLIFNT 918
Query: 839 FVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERLNWG 898
FVLCQ+FNEFNAR LEKKN+FKG+HKN+LF+ II +T+ LQ+VMVEFLK FADTERLN G
Sbjct: 919 FVLCQVFNEFNARSLEKKNVFKGLHKNRLFIGIIVVTVVLQVVMVEFLKRFADTERLNLG 978
Query: 899 QWAACIGIAAMSWPIGFLIKCIPVSGKQLL 928
QW CI IAA SWPIG+L+K +PV +
Sbjct: 979 QWGVCIAIAAASWPIGWLVKSVPVPERHFF 1008
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1015 bits (2624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/931 (56%), Positives = 679/931 (72%), Gaps = 20/931 (2%)
Query: 5 MVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFIS 64
M K+ + +L GG +A++L + + GI G + DL R ++G N Y + K F+
Sbjct: 124 MSKDHNSGALEQYGGTQGLANLLKTNPEKGISGDDDDLLKRKTIYGSNTYPRKKGKGFLR 183
Query: 65 FVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQS 124
F+++A D T+IIL+V A+ SL GIK G+KEGW+DGGSI FAV LV+ V+AVS++KQS
Sbjct: 184 FLWDACHDLTLIILMVAAVASLALGIKTEGIKEGWYDGGSIAFAVILVIVVTAVSDYKQS 243
Query: 125 RQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVD 184
QFQ L +E +I +EV+R GRR +SI+D+VVG+V+ L G+Q+PADG+ ++GHSL +D
Sbjct: 244 LQFQNLNDEKRNIHLEVLRGGRRVEISIYDIVVGDVIPLNIGNQVPADGVLISGHSLALD 303
Query: 185 ESSMTGESDRVEVD-EKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEET 243
ESSMTGES V D K+PFL+SG KV G G MLVT VG++T WG +M+SIS + EET
Sbjct: 304 ESSMTGESKIVNKDANKDPFLMSGCKVADGNGSMLVTGVGVNTEWGLLMASISEDNGEET 363
Query: 244 PLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSV 303
PLQ RLN + ++IG IGL VA VL ++L RYFTG+T+D G +FV GKTK V++ V
Sbjct: 364 PLQVRLNGVATFIGSIGLAVAAAVLVILLTRYFTGHTKDNNGGPQFVKGKTKVGHVIDDV 423
Query: 304 INIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDK 363
+ ++ AVTI+VVA+PEGLPLAVTLTLA+SM++MM D A+VR+LSACETMGSATTIC+DK
Sbjct: 424 VKVLTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDK 483
Query: 364 TGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSE 423
TGTLTLNQM V E + G + ++ +L + L+ E + NTTG+++ E
Sbjct: 484 TGTLTLNQMTVVESYAGGKKTDTE----QLPATITSLVVEGISQNTTGSIFVPEGGGDLE 539
Query: 424 ITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHW 483
+GSPTEKAIL W + LGMN + + ++++ FNSEKKR GV +K + +V H HW
Sbjct: 540 YSGSPTEKAILGWG-VKLGMNFETARSQSSILHAFPFNSEKKRGGVAVKTADGEV-HVHW 597
Query: 484 KGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFA-HTKAAE--A 540
KGA+E++L C Y + G + + ++ + + I +MA ++LRC+A A T AE
Sbjct: 598 KGASEIVLASCRSYIDEDGNVAPMTDDKASFFKNGINDMAGRTLRCVALAFRTYEAEKVP 657
Query: 541 DGQVQEK--LEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIA 598
G+ K L E L LL +VG+KDPCRPGV+ +V C+NAGV V+MVTGDNV TARAIA
Sbjct: 658 TGEELSKWVLPEDDLILLAIVGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQTARAIA 717
Query: 599 IECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQK 658
+ECGIL+ D DL+ + +IEG FR ++ ER + I VM RSSP DKLL+VQSL+++
Sbjct: 718 LECGILSSDADLS-EPTLIEGKSFREMTDAERDKISDKISVMGRSSPNDKLLLVQSLRRQ 776
Query: 659 GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCV 718
GHVVAVTGDGTNDAPAL ADIGL+MGI GTEVAKESSDI+I+DDNF+SVV V+RWGR V
Sbjct: 777 GHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSV 836
Query: 719 YNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPT 778
Y NIQKF+QFQLTVNVAALVIN AA+SSG VPLTAVQLLWVNLIMDTLGALALATE PT
Sbjct: 837 YANIQKFIQFQLTVNVAALVINVVAAISSGDVPLTAVQLLWVNLIMDTLGALALATEPPT 896
Query: 779 NDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKES-------VK 831
+ LM +PPVGR +PLIT IMWRNL+ QAIYQV++LLTL F+G SILG++ VK
Sbjct: 897 DHLMGRPPVGRKEPLITNIMWRNLLIQAIYQVSVLLTLNFRGISILGLEHEVHEHATRVK 956
Query: 832 DTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFAD 891
+T+IFN FVLCQ FNEFNARK ++KNIFKG+ KN+LF+ II IT+ LQ+++VEFL FA
Sbjct: 957 NTIIFNAFVLCQAFNEFNARKPDEKNIFKGVIKNRLFMGIIVITLVLQVIIVEFLGKFAS 1016
Query: 892 TERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922
T +LNW QW C+GI +SWP+ + K IPV
Sbjct: 1017 TTKLNWKQWLICVGIGVISWPLALVGKFIPV 1047
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9SZR1|ACA10_ARATH Calcium-transporting ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=ACA10 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1013 bits (2618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/929 (56%), Positives = 681/929 (73%), Gaps = 18/929 (1%)
Query: 7 KEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFV 66
++++ +L LGGV ++ +L + + GI G + D+ R + FG N Y + + F FV
Sbjct: 126 RDQNIGALQELGGVRGLSDLLKTNLEKGIHGDDDDILKRKSAFGSNTYPQKKGRSFWRFV 185
Query: 67 FEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQ 126
+EA +D T+IIL+V A+ SL GIK G+++GW+DG SI FAV LV+ V+A S+++QS Q
Sbjct: 186 WEASQDLTLIILIVAAVASLALGIKTEGIEKGWYDGISIAFAVLLVIVVTATSDYRQSLQ 245
Query: 127 FQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDES 186
FQ L E +IR+EV RDGRR +SI+D+VVG+V+ L GDQ+PADG+ + GHSL VDES
Sbjct: 246 FQNLNEEKRNIRLEVTRDGRRVEISIYDIVVGDVIPLNIGDQVPADGVLVAGHSLAVDES 305
Query: 187 SMTGESDRVEVDE-KNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPL 245
SMTGES V+ + K+PFL+SG KV G G MLVT VG++T WG +M+S+S + ETPL
Sbjct: 306 SMTGESKIVQKNSTKHPFLMSGCKVADGNGTMLVTGVGVNTEWGLLMASVSEDNGGETPL 365
Query: 246 QARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVIN 305
Q RLN + ++IG +GLTVA +VL V+++RYFTG+T++ G +F+GGKTKF+ V++ ++
Sbjct: 366 QVRLNGVATFIGIVGLTVAGVVLFVLVVRYFTGHTKNEQGGPQFIGGKTKFEHVLDDLVE 425
Query: 306 IIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTG 365
I AVTI+VVA+PEGLPLAVTLTLA+SM++MM D A+VR+LSACETMGSATTIC+DKTG
Sbjct: 426 IFTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTG 485
Query: 366 TLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEIT 425
TLTLN+M V E + G + M S S +L +L E + NTTG+V+ S S +++
Sbjct: 486 TLTLNEMTVVECYAGLQKMDSPDSSSKLPSAFTSILVEGIAHNTTGSVFRSES-GEIQVS 544
Query: 426 GSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKG 485
GSPTE+AIL+WA I LGM+ D K + + FNSEKKR GV +K + V H HWKG
Sbjct: 545 GSPTERAILNWA-IKLGMDFDALKSESSAVQFFPFNSEKKRGGVAVKSPDSSV-HIHWKG 602
Query: 486 AAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQ 545
AAE++L C+HY +S + + ++ ++ I +MAA+SLRC+A A + EAD
Sbjct: 603 AAEIVLGSCTHYMDESESFVDMSEDKMGGLKDAIDDMAARSLRCVAIAF-RTFEADKIPT 661
Query: 546 EK-------LEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIA 598
++ L E L LL +VG+KDPCRPGV+ +V C+ AGV V+MVTGDN+ TA+AIA
Sbjct: 662 DEEQLSRWELPEDDLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMVTGDNIQTAKAIA 721
Query: 599 IECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQK 658
+ECGIL D D ++ +IEG FRS S EER E I VM RSSP DKLL+VQSLK++
Sbjct: 722 LECGILASDSDASEPN-LIEGKVFRSYSEEERDRICEEISVMGRSSPNDKLLLVQSLKRR 780
Query: 659 GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCV 718
GHVVAVTGDGTNDAPAL ADIGL+MGIQGTEVAKE SDI+I+DDNF SVV V+RWGR V
Sbjct: 781 GHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESVVKVVRWGRSV 840
Query: 719 YNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPT 778
Y NIQKF+QFQLTVNVAALVIN AA+S+G+VPLTAVQLLWVNLIMDTLGALALATE PT
Sbjct: 841 YANIQKFIQFQLTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTLGALALATEPPT 900
Query: 779 NDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVK-----ESVKDT 833
+ LM + PVGR +PLIT IMWRNL QA+YQV +LL L F+G SIL +K E VK+T
Sbjct: 901 DHLMDRAPVGRREPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLKSKPNAERVKNT 960
Query: 834 MIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTE 893
+IFN FV+CQ+FNEFNARK ++ NIF+G+ +N LF+ II ITI LQ+V+VEFL TFA T
Sbjct: 961 VIFNAFVICQVFNEFNARKPDEINIFRGVLRNHLFVGIISITIVLQVVIVEFLGTFASTT 1020
Query: 894 RLNWGQWAACIGIAAMSWPIGFLIKCIPV 922
+L+W W CIGI ++SWP+ + K IPV
Sbjct: 1021 KLDWEMWLVCIGIGSISWPLAVIGKLIPV 1049
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LU41|ACA9_ARATH Calcium-transporting ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=ACA9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/934 (55%), Positives = 664/934 (71%), Gaps = 17/934 (1%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L M + ++ +L GGV VA L + + GI E ++ R N FG N Y K K
Sbjct: 135 LVSMTRNQNMSNLQQYGGVKGVAEKLKSNMEQGINEDEKEVIDRKNAFGSNTYPKKKGKN 194
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNF 121
F F++EA++D T+IIL++ A+ SL GIK GLKEGW DGGSI FAV LV+ V+AVS++
Sbjct: 195 FFMFLWEAWQDLTLIILIIAAVTSLALGIKTEGLKEGWLDGGSIAFAVLLVIVVTAVSDY 254
Query: 122 KQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
+QS QFQ L +E +I++EV+R GR +SI+DVVVG+V+ L+ GDQ+PADG+ ++GHSL
Sbjct: 255 RQSLQFQNLNDEKRNIQLEVMRGGRTVKISIYDVVVGDVIPLRIGDQVPADGVLISGHSL 314
Query: 182 KVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNE 241
+DESSMTGES V D+K+PFL+SG KV G G MLVT VG++T WG +M+SIS + E
Sbjct: 315 AIDESSMTGESKIVHKDQKSPFLMSGCKVADGVGNMLVTGVGINTEWGLLMASISEDTGE 374
Query: 242 ETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMN 301
ETPLQ RLN L ++IG +GL+VA++VL +L+RYFTG T+D G +F+ G T D+++
Sbjct: 375 ETPLQVRLNGLATFIGIVGLSVALVVLVALLVRYFTGTTQDTNGATQFIKGTTSISDIVD 434
Query: 302 SVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICT 361
+ I AVTI+VVA+PEGLPLAVTLTLA+SM++MM D A+VR+LSACETMGSATTIC+
Sbjct: 435 DCVKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICS 494
Query: 362 DKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLST 421
DKTGTLTLNQM V E + G M L L L+ E V NTTGN+++
Sbjct: 495 DKTGTLTLNQMTVVETYAGGSKMDVADNPSGLHPKLVALISEGVAQNTTGNIFHPKDGGE 554
Query: 422 SEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHT 481
EI+GSPTEKAILSWA LGM D + +I+ FNSEKKR GV + R + +VF
Sbjct: 555 VEISGSPTEKAILSWAY-KLGMKFDTIRSESAIIHAFPFNSEKKRGGVAVLRGDSEVF-I 612
Query: 482 HWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFA-HTKAAEA 540
HWKGAAE++L C+ Y +GT++ ++ ++ I MA SLRC+A A T+
Sbjct: 613 HWKGAAEIVLACCTQYMDSNGTLQSIESQKEF-FRVAIDSMAKNSLRCVAIACRTQELNQ 671
Query: 541 DGQVQEKLE-----ETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTAR 595
+ QE L+ E L LL +VG+KDPCRPGVR AV C +AGV V+MVTGDN+ TA+
Sbjct: 672 VPKEQEDLDKWALPEDELILLAIVGIKDPCRPGVREAVRICTSAGVKVRMVTGDNLQTAK 731
Query: 596 AIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSL 655
AIA+ECGIL+ D + + +IEG FR LS +ER + I VM RSSP DKLL+VQ+L
Sbjct: 732 AIALECGILSSDTEA-VEPTIIEGKVFRELSEKEREQVAKKITVMGRSSPNDKLLLVQAL 790
Query: 656 KQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWG 715
++ G VVAVTGDGTNDAPAL ADIGLSMGI GTEVAKESSDI+I+DDNF+SVV V+RWG
Sbjct: 791 RKNGDVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWG 850
Query: 716 RCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATE 775
R VY NIQKF+QFQLTVNVAAL+IN AA+SSG VPL AVQLLWVNLIMDTLGALALATE
Sbjct: 851 RSVYANIQKFIQFQLTVNVAALIINVVAAMSSGDVPLKAVQLLWVNLIMDTLGALALATE 910
Query: 776 QPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKE------- 828
PT+ LM + PVGR +PLIT IMWRNL+ Q+ YQVA+LL L F G SILG+
Sbjct: 911 PPTDHLMHRTPVGRREPLITNIMWRNLLVQSFYQVAVLLVLNFAGLSILGLNHENHAHAV 970
Query: 829 SVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKT 888
VK+TMIFN FV+CQIFNEFNARK ++ N+F+G++KN LF+AI+G+T LQ+++V FL
Sbjct: 971 EVKNTMIFNAFVMCQIFNEFNARKPDEMNVFRGVNKNPLFVAIVGVTFILQIIIVTFLGK 1030
Query: 889 FADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922
FA T RL W W A I I +SWP+ + K IPV
Sbjct: 1031 FAHTVRLGWQLWLASIIIGLVSWPLAIVGKLIPV 1064
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/942 (47%), Positives = 632/942 (67%), Gaps = 37/942 (3%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L+ MV+ +SL+ +GG +A + G+R SE L R ++G NRY + PA+
Sbjct: 100 LASMVRNHDTKSLTKIGGPEGIAQKVSVSLAEGVRSSE--LHIREKIYGENRYTEKPARS 157
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNF 121
F++FV+EA +D T+IIL+VCA++S+G G+ G +G +DG I+ ++ LVV V+A+S++
Sbjct: 158 FLTFVWEALQDITLIILMVCAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAISDY 217
Query: 122 KQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
KQS QF+ L E I ++V RDG R+ +SI D+VVG+VV L GDQ+PADG+F++G++L
Sbjct: 218 KQSLQFRDLDREKKKIIIQVTRDGSRQEVSIHDLVVGDVVHLSIGDQVPADGIFISGYNL 277
Query: 182 KVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNE 241
++DESS++GES+ V+++ PFLLSGTKV G MLVT+VGM T WG++M ++S +
Sbjct: 278 EIDESSLSGESEPSHVNKEKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMDTLSEGGED 337
Query: 242 ETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKF--DDV 299
ETPLQ +LN + + IGKIGL AVL V+ IR+ ++ G T++ +D
Sbjct: 338 ETPLQVKLNGVATIIGKIGLGFAVLTFVVLCIRFVV--------EKATAGSITEWSSEDA 389
Query: 300 MNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTI 359
+ ++++ A AVTIIVVA+PEGLPLAVTL+LAF+MK++M D A+VR L+ACETMGS+T I
Sbjct: 390 L-TLLDYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKQLMSDRALVRHLAACETMGSSTCI 448
Query: 360 CTDKTGTLTLNQMKVTEFWLGK--EAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSN 417
CTDKTGTLT N M V + W+ + + + + L L++ + +L +A+ NT V
Sbjct: 449 CTDKTGTLTTNHMVVNKVWICENIKERQEENFQLNLSEQVKNILIQAIFQNTGSEVVKDK 508
Query: 418 SLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEK 477
T +I GSPTE+AIL + ++ LG +VD ++ ++ +E FNS+KK+ VL K
Sbjct: 509 EGKT-QILGSPTERAILEFGLL-LGGDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGGK 566
Query: 478 VFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKA 537
V KGA+E++L MC +G L E+ I +I+ A+++LR + +T
Sbjct: 567 V-RAFCKGASEIVLKMCEKVVDSNGESVPLSEEKIASISDVIEGFASEALRTLCLVYTDL 625
Query: 538 AEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAI 597
EA + L G TL+ +VG+KDP RPGVR AV++C+ AG+ V+MVTGDN+ TA+AI
Sbjct: 626 DEAP---RGDLPNGGYTLVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAI 682
Query: 598 AIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQ 657
A ECGIL IEG FR+L E A + I+VMARS PLDK +V +L++
Sbjct: 683 AKECGILT------AGGVAIEGSDFRNLPPHEMRAILPKIQVMARSLPLDKHTLVNNLRK 736
Query: 658 KGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRC 717
G VVAVTGDGTNDAPAL ADIGL+MGI GTEVAKE++D++IMDDNF+++V V +WGR
Sbjct: 737 MGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRA 796
Query: 718 VYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQP 777
VY NIQKF+QFQLTVNV AL+INF +A +G PLTAVQLLWVN+IMDTLGALALATE P
Sbjct: 797 VYINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPP 856
Query: 778 TNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKES----VKDT 833
LM + P+GR+ IT+ MWRN+I Q+IYQ+ +L L F G+ IL + V +T
Sbjct: 857 NEGLMKRQPIGRTASFITRAMWRNIIGQSIYQLIVLGILNFAGKQILNLNGPDSTIVLNT 916
Query: 834 MIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTE 893
+IFN+FV CQ+FNE N+R++EK N+F+G+ K+ +F+A++ T+ Q+++VEFL FA T
Sbjct: 917 IIFNSFVFCQVFNEVNSREIEKINVFEGMFKSWVFVAVMTATVGFQVIIVEFLGAFASTV 976
Query: 894 RLNWGQWAACIGIAAMSWPIGFLIKCIPV------SGKQLLP 929
L+W W CI I ++S + +KCIPV G +LLP
Sbjct: 977 PLSWQHWLLCILIGSVSMILAVGLKCIPVESNRHHDGYELLP 1018
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/934 (47%), Positives = 626/934 (67%), Gaps = 34/934 (3%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L+ + + ++L GGV+ ++ + GI S DL R N++G NRY + P++
Sbjct: 83 LALITSKHDSKALKMHGGVDGISKKVRSSFDHGICAS--DLDTRQNIYGVNRYAEKPSRS 140
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNF 121
F FV++AF+D T+IIL+VCALLS+ G+ G +G +DG II ++FLVV V+AVS++
Sbjct: 141 FWMFVWDAFQDMTLIILMVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDY 200
Query: 122 KQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
KQS QF+ L NE I + V RDGRR+ +SI+D+VVG++V L GDQ+PADGL+++G+SL
Sbjct: 201 KQSLQFKELDNEKKKIFIHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSL 260
Query: 182 KVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNE 241
+DESS++GESD V V + PF+L+GTKV G M+VT+VGM T WG++MS++S +
Sbjct: 261 LIDESSLSGESDPVYVSQDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGED 320
Query: 242 ETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMN 301
ETPLQ +LN + + IGKIGL A+L V+L+R+ + K VG +
Sbjct: 321 ETPLQVKLNGVATVIGKIGLVFAILTFLVLLVRFL-------IDKGMTVGLLKWYSTDAL 373
Query: 302 SVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICT 361
+++N A AVTIIVVA+PEGLPLAVTL+LAF+MK++M D A+VR LSACETMGSA TICT
Sbjct: 374 TIVNYFATAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICT 433
Query: 362 DKTGTLTLNQMKVTEFWLGK--EAMKSDACSLEL----AQNLYELLQEAVGLNTTGNVYN 415
DKTGTLT N M V + W+ + +++ S+ S EL + LL + + NT+ V
Sbjct: 434 DKTGTLTTNYMVVDKIWISEVSKSVTSNTISGELNSVVSSRTLSLLLQGIFENTSAEVVK 493
Query: 416 SNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRIN 475
+ G+PTE+AIL + + G++ D CT + VE FNS KK+ VL I+
Sbjct: 494 EKD-GKQTVLGTPTERAILEFGLGLEGVH-DAEYSACTKVKVEPFNSVKKKMAVL---IS 548
Query: 476 EKVFHTHW--KGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFA 533
+ W KGA+E+IL MC G L +R I I A+ +LR + A
Sbjct: 549 LPSGTSRWFCKGASEIILQMCDMMVDGDGNAIPLSEAQRKNILDTINSFASDALRTLCLA 608
Query: 534 HTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHT 593
+ K + D +G TL+ + G+KDP RPGV+ AV++C +AG+ V+MVTGDN++T
Sbjct: 609 Y-KEVDDDIDDNADSPTSGFTLIAIFGIKDPVRPGVKDAVKTCMSAGITVRMVTGDNINT 667
Query: 594 ARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQ 653
A+AIA ECGI L +D IEG +F S S EE I +I+VMARS PLDK +V
Sbjct: 668 AKAIAKECGI------LTEDGVAIEGPEFHSKSPEEMRDLIPNIQVMARSLPLDKHTLVT 721
Query: 654 SLKQK-GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVL 712
+L+ VV+VTGDGTNDAPAL ADIGL+MGI GTEVAKES+D++++DDNF++++ V
Sbjct: 722 NLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIVLDDNFTTIINVA 781
Query: 713 RWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALAL 772
RWGR VY NIQKF+QFQLTVN+ ALVINF +A +G PLTAVQLLWVN+IMDTLGALAL
Sbjct: 782 RWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGSAPLTAVQLLWVNMIMDTLGALAL 841
Query: 773 ATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVK----E 828
ATE P +++M +PPV + + ITK+MWRN++ Q++YQ+ +L L F G S+L +K +
Sbjct: 842 ATEPPNDEMMKRPPVRKGESFITKVMWRNIMGQSLYQLFVLGALMFGGESLLNIKGADSK 901
Query: 829 SVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKT 888
S+ +T+IFN+FV CQ+FNE N+R+++K N+F+GI N +F+A+I T+A Q+V++EFL T
Sbjct: 902 SIINTLIFNSFVFCQVFNEINSREMQKINVFRGIISNWIFIAVIAATVAFQVVIIEFLGT 961
Query: 889 FADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922
FA T LNW W +G+ ++S +G ++KCIPV
Sbjct: 962 FASTVPLNWQHWLLSVGLGSISLIVGVILKCIPV 995
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/936 (47%), Positives = 624/936 (66%), Gaps = 38/936 (4%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L+ + + ++L GGV+ ++ + GI SE D R N++G NRY + P++
Sbjct: 105 LALITSKHDSKALKMHGGVDGISIKVRSSFDHGIYASELD--TRQNIYGVNRYAEKPSRS 162
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNF 121
F FV++A +D T+IIL+VCALLS+ G+ G +G +DG II ++FLVV V+AVS++
Sbjct: 163 FWMFVWDALQDMTLIILMVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDY 222
Query: 122 KQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
KQS QF+ L NE I + V RDGRR+ +SI+D+VVG++V L GDQ+PADGL+++G+SL
Sbjct: 223 KQSLQFKELDNEKKKIFIHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSL 282
Query: 182 KVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNE 241
+DESS++GESD V V + PF+L+GTKV G M+VT+VGM T WG++MS++S +
Sbjct: 283 LIDESSLSGESDPVYVSQDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGED 342
Query: 242 ETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMN 301
ETPLQ +LN + + IGKIGL A+L V+L+R+ + K VG +
Sbjct: 343 ETPLQVKLNGVATIIGKIGLVFAILTFLVLLVRFL-------IDKGMTVGLLKWYSTDAL 395
Query: 302 SVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICT 361
+++N A AVTIIVVA+PEGLPLAVTL+LAF+MK++M D A+VR LSACETMGSA TICT
Sbjct: 396 TIVNYFATAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICT 455
Query: 362 DKTGTLTLNQMKVTEFWLGK--EAMKSDACSLEL----AQNLYELLQEAVGLNTTGNVYN 415
DKTGTLT N M V + W+ + +++ S+ S EL + + LL + + NT+ V
Sbjct: 456 DKTGTLTTNHMVVDKIWISEVSKSVTSNTISGELNSVVSSSTLSLLLQGIFENTSAEVVK 515
Query: 416 SNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQY--CTVINVEAFNSEKKRSGVLMKR 473
+ G+PTE+AIL + LG+ D +Y CT + VE FNS KK+ VL+
Sbjct: 516 EKD-GKQTVLGTPTERAILEFG---LGLKGDHDAEYRACTKVKVEPFNSVKKKMAVLISL 571
Query: 474 INEKVFHTHW--KGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIA 531
N + W KGA+E+IL MC G L +R I I A+ +LR +
Sbjct: 572 PNGT---SRWFCKGASEIILQMCDMMVDGDGNAIPLSEAQRKNILDTINSFASDALRTLC 628
Query: 532 FAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNV 591
A+ K + D +G TL+ + G+KDP RPGV+ AV++C +AG+ V+MVTGDN+
Sbjct: 629 LAY-KEVDDDIDDNADSPTSGFTLIAIFGIKDPVRPGVKDAVKTCMSAGITVRMVTGDNI 687
Query: 592 HTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLM 651
+TA+AIA ECGI L +D IEG +F S S EE I +I+VMARS PLDK +
Sbjct: 688 NTAKAIAKECGI------LTEDGVAIEGPEFHSKSTEEMRDLILNIQVMARSLPLDKHTL 741
Query: 652 VQSLKQK-GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVT 710
V +L+ VV+VTGDGTNDAPAL ADIGL+MGI GTEVAKES+D++++DDNF++++
Sbjct: 742 VTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIVLDDNFTTIIN 801
Query: 711 VLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGAL 770
V RWGR VY NIQKF+QFQLTVN+ ALVINF +A G PLTAVQLLWVN+IMDTLGAL
Sbjct: 802 VARWGRAVYINIQKFVQFQLTVNIVALVINFVSACIIGSAPLTAVQLLWVNMIMDTLGAL 861
Query: 771 ALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVK--- 827
ALATE P +++M +PPV + + ITK MWRN++ Q++YQ+ +L L F G +L +K
Sbjct: 862 ALATEPPNDEMMKRPPVRKGESFITKFMWRNIMGQSLYQLFVLGALMFGGERLLNIKGAD 921
Query: 828 -ESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFL 886
+S+ +T+IFN+FV CQ+FNE N+R+++K N+F+GI N +F+A+I T+A Q+V++EFL
Sbjct: 922 SKSIINTLIFNSFVFCQVFNEINSREMQKINVFRGIISNWIFIAVIAATVAFQVVIIEFL 981
Query: 887 KTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922
TFA T LNW W +G+ ++S +G ++KCIPV
Sbjct: 982 GTFASTVPLNWQHWLLSVGLGSISLIVGVILKCIPV 1017
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/949 (46%), Positives = 625/949 (65%), Gaps = 36/949 (3%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L+ MV++ +SL+ GGV ++A + GIR SE + R +FG NRY + PA+
Sbjct: 100 LASMVRKNDTKSLAQKGGVEELAKKVSVSLSEGIRSSEVPI--REKIFGENRYTEKPARS 157
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNF 121
F+ FV+EA D T+IIL+VCA++S+G G+ G G +DG I+ ++ LVV V+A+S++
Sbjct: 158 FLMFVWEALHDITLIILMVCAVVSIGVGVATEGFPRGMYDGTGILLSILLVVMVTAISDY 217
Query: 122 KQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
KQS QF+ L E I V+V RDG R+ +SI D+VVG+VV L GDQ+PADG+F++G++L
Sbjct: 218 KQSLQFRDLDREKKKIIVQVTRDGSRQEISIHDLVVGDVVHLSIGDQVPADGIFISGYNL 277
Query: 182 KVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNE 241
++DESS++GES+ V+++ PFLLSGTKV G MLVT+VGM T WG++M ++ +
Sbjct: 278 EIDESSLSGESEPSHVNKEKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMETLVDGGED 337
Query: 242 ETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMN 301
ETPLQ +LN + + IGKIGL+ AVL V+ IR+ G F + +D +
Sbjct: 338 ETPLQVKLNGVATIIGKIGLSFAVLTFVVLCIRFVLDKATSG----SFTNWSS--EDAL- 390
Query: 302 SVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICT 361
++++ A +VTIIVVA+PEGLPLAVTL+LAF+MK++M D A+VR L+ACETMGS+T ICT
Sbjct: 391 TLLDYFAISVTIIVVAVPEGLPLAVTLSLAFAMKKLMSDRALVRHLAACETMGSSTCICT 450
Query: 362 DKTGTLTLNQMKVTEFWLGKEAMKSDACS-----LELAQNLYELLQEAVGLNTTGNVYNS 416
DKTGTLT N M V + W+ + + S LEL++ + L + + NT V
Sbjct: 451 DKTGTLTTNHMVVNKVWICDKVQERQEGSKESFELELSEEVQSTLLQGIFQNTGSEVVKD 510
Query: 417 NSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINE 476
+T +I GSPTE+AIL + ++ LG + + ++ ++ +E FNS+KK+ VL+
Sbjct: 511 KDGNT-QILGSPTERAILEFGLL-LGGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGG 568
Query: 477 KVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTK 536
KGA+E++L MC + +G L E T I II+ A+++LR + +
Sbjct: 569 GA-RAFCKGASEIVLKMCENVVDSNGESVPLTEERITSISDIIEGFASEALRTLCLVYKD 627
Query: 537 AAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARA 596
EA +L + G T++ +VG+KDP RPGVR AV++C+ AG+ V+MVTGDN+ TA+A
Sbjct: 628 LDEAPSG---ELPDGGYTMVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKA 684
Query: 597 IAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLK 656
IA ECGI + IEG +FR LS E A I I+VMARS PLDK +V +L+
Sbjct: 685 IAKECGIYT------EGGLAIEGSEFRDLSPHEMRAIIPKIQVMARSLPLDKHTLVSNLR 738
Query: 657 QKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGR 716
+ G VVAVTGDGTNDAPAL ADIGL+MGI GTEVAKE++D++IMDDNF ++V V RWGR
Sbjct: 739 KIGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFKTIVNVARWGR 798
Query: 717 CVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQ 776
VY NIQKF+QFQLTVNV AL+INF +A +G PLTAVQLLWVN+IMDTLGALALATE
Sbjct: 799 AVYINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEP 858
Query: 777 PTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGV----KESVKD 832
P LM + P+ R+ ITK MWRN+ Q++YQ+ +L L F G+S+L + +V +
Sbjct: 859 PNEGLMKRAPIARTASFITKTMWRNIAGQSVYQLIVLGILNFAGKSLLKLDGPDSTAVLN 918
Query: 833 TMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADT 892
T+IFN+FV CQ+FNE N+R++EK N+FKG+ + +F ++ +T+ Q+++VEFL FA T
Sbjct: 919 TVIFNSFVFCQVFNEINSREIEKINVFKGMFNSWVFTWVMTVTVVFQVIIVEFLGAFAST 978
Query: 893 ERLNWGQWAACIGIAAMSWPIGFLIKCIPV------SGKQLLPINQEAS 935
L+W W I I +++ + ++KC+PV G LLP +S
Sbjct: 979 VPLSWQHWLLSILIGSLNMIVAVILKCVPVESRHHHDGYDLLPSGPSSS 1027
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/933 (47%), Positives = 622/933 (66%), Gaps = 30/933 (3%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L +V+ + L GG + L GI SE L R ++G N++ + P++
Sbjct: 103 LGSIVEGHDLKKLKIHGGTEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRG 162
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNF 121
F FV+EA +DTT++IL CA +SL GI G G DG I+ ++ LVV V+A S++
Sbjct: 163 FWLFVWEALQDTTLMILAACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDY 222
Query: 122 KQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
+QS QF+ L E I V+V RD R+ +SI+D++ G+VV L GDQIPADGLF++G S+
Sbjct: 223 RQSLQFKDLDAEKKKIVVQVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSV 282
Query: 182 KVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNE 241
++ESS+TGES+ V V ++PFLLSGTKV G MLVT+VGM T WG++M+++S ++
Sbjct: 283 LINESSLTGESEPVSVSVEHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDD 342
Query: 242 ETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMN 301
ETPLQ +LN + + IGKIGL AV+ AV L++ R + ++ D++M
Sbjct: 343 ETPLQVKLNGVATIIGKIGLFFAVITFAV-LVQGLANQKR--LDNSHWIWTA---DELM- 395
Query: 302 SVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICT 361
+++ A AVTI+VVA+PEGLPLAVTL+LAF+MK+MM D A+VR L+ACETMGSATTIC+
Sbjct: 396 AMLEYFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICS 455
Query: 362 DKTGTLTLNQMKVTEFWL---GKEAMKSDACSLELAQNLYE----LLQEAVGLNTTGNVY 414
DKTGTLT N M V + + KE DA +++ A + E LL +++ NT G +
Sbjct: 456 DKTGTLTTNHMTVVKACICEQAKEVNGPDA-AMKFASGIPESAVKLLLQSIFTNTGGEIV 514
Query: 415 NSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRI 474
+ +EI G+PTE A+L + + LG + E +Q V+ VE FNS KKR GV+++ +
Sbjct: 515 VGKG-NKTEILGTPTETALLEFGL-SLGGDFQEVRQASNVVKVEPFNSTKKRMGVVIE-L 571
Query: 475 NEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAH 534
E+ F H KGA+E++L C Y K G + LD + + ++ II+E A+++LR + A+
Sbjct: 572 PERHFRAHCKGASEIVLDSCDKYINKDGEVVPLDEKSTSHLKNIIEEFASEALRTLCLAY 631
Query: 535 TKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTA 594
+ + + ++ + G T +G+VG+KDP RPGV+ +V C++AG+ V+MVTGDN+ TA
Sbjct: 632 FEIGD-EFSLEAPIPSGGYTCIGIVGIKDPVRPGVKESVAICKSAGITVRMVTGDNLTTA 690
Query: 595 RAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQS 654
+AIA ECGIL D IEG +FR S EE + I ++VMARSSP+DK +V+
Sbjct: 691 KAIARECGILT------DDGIAIEGPEFREKSDEELLKLIPKLQVMARSSPMDKHTLVRL 744
Query: 655 LKQK-GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713
L+ VVAVTGDGTNDAPAL ADIGL+MGI GTEVAKES+D++I+DDNFS++VTV +
Sbjct: 745 LRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGTEVAKESADVIILDDNFSTIVTVAK 804
Query: 714 WGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALA 773
WGR VY NIQKF+QFQLTVNV AL++NF +A +G PLTAVQLLWVN+IMDTLGALALA
Sbjct: 805 WGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGNAPLTAVQLLWVNMIMDTLGALALA 864
Query: 774 TEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKD- 832
TE P +DLM + PVGR I+ +MWRN++ Q++YQ+ I+ LQ KG+++ G+ D
Sbjct: 865 TEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQLVIIWCLQTKGKTMFGLDGPDSDL 924
Query: 833 ---TMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTF 889
T+IFN FV CQ+FNE ++R++EK ++FKGI KN +F+A++ T+ Q++++E L TF
Sbjct: 925 TLNTLIFNIFVFCQVFNEISSREMEKIDVFKGILKNYVFVAVLTCTVVFQVIIIELLGTF 984
Query: 890 ADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922
ADT LN GQW I + + P+ +K IPV
Sbjct: 985 ADTTPLNLGQWLVSIILGFLGMPVAAALKMIPV 1017
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 941 | ||||||
| 225451324 | 1057 | PREDICTED: calcium-transporting ATPase 1 | 0.982 | 0.875 | 0.716 | 0.0 | |
| 224130658 | 966 | autoinhibited calcium ATPase [Populus tr | 0.959 | 0.934 | 0.741 | 0.0 | |
| 255542302 | 1026 | cation-transporting atpase plant, putati | 0.980 | 0.899 | 0.746 | 0.0 | |
| 255542300 | 996 | cation-transporting atpase plant, putati | 0.975 | 0.921 | 0.720 | 0.0 | |
| 147790888 | 1007 | hypothetical protein VITISV_002789 [Viti | 0.971 | 0.907 | 0.700 | 0.0 | |
| 225451326 | 1007 | PREDICTED: calcium-transporting ATPase 1 | 0.971 | 0.907 | 0.697 | 0.0 | |
| 225432828 | 1011 | PREDICTED: putative calcium-transporting | 0.980 | 0.912 | 0.702 | 0.0 | |
| 225432836 | 1011 | PREDICTED: putative calcium-transporting | 0.980 | 0.912 | 0.706 | 0.0 | |
| 225432826 | 1007 | PREDICTED: putative calcium-transporting | 0.982 | 0.918 | 0.700 | 0.0 | |
| 225432838 | 1012 | PREDICTED: putative calcium-transporting | 0.980 | 0.912 | 0.700 | 0.0 |
| >gi|225451324|ref|XP_002273945.1| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1403 bits (3631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 666/929 (71%), Positives = 795/929 (85%), Gaps = 4/929 (0%)
Query: 1 MLSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAK 60
ML++ V++K FE L GG+ Q+ ++L D K GI G EADL HR +VFG N+Y++PP K
Sbjct: 122 MLTETVRDKDFERLHQFGGIKQLVAVLKTDEKDGIDGHEADLKHRRDVFGSNQYRRPPKK 181
Query: 61 RFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSN 120
F SFV EAFKDT IIIL+VCA+LSLGFGIKQ G+KEGW+DGGSI+ A+FLVV VS+VSN
Sbjct: 182 SFFSFVVEAFKDTIIIILMVCAILSLGFGIKQEGIKEGWYDGGSIVIAIFLVVIVSSVSN 241
Query: 121 FKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHS 180
F+QSRQFQ L++E+SDI+V+VVR GRR+ +SIF +VVG++VCL GDQ+PADGLF+ GHS
Sbjct: 242 FRQSRQFQKLSSETSDIKVQVVRQGRRQPVSIFQLVVGDIVCLNIGDQVPADGLFMEGHS 301
Query: 181 LKVDESSMTGESDRVEVDEK-NPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHEL 239
LKVDESSMTGESD VE+++K NPFL SGTKV+ G+G MLVTSVGM+TAWGEMMSSI EL
Sbjct: 302 LKVDESSMTGESDHVEINDKDNPFLFSGTKVSDGFGTMLVTSVGMNTAWGEMMSSIRREL 361
Query: 240 NEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDV 299
+E+TPLQARL+KL S IGK+GL VA++VL V++IRYFTGNT D G +EF G KT +DV
Sbjct: 362 DEQTPLQARLDKLASTIGKLGLAVALIVLVVLIIRYFTGNTEDENGMQEFNGSKTNINDV 421
Query: 300 MNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTI 359
M++V++II+AAVTI+VVAIPEGLPLAVTL+LA+SMKRMM D AMVRKLSACETMGSATTI
Sbjct: 422 MDAVVHIISAAVTIVVVAIPEGLPLAVTLSLAYSMKRMMADQAMVRKLSACETMGSATTI 481
Query: 360 CTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSL 419
CTDKTGTLTLN+MKV EFWLG E ++ D LE+A ++ +LL++ VGLNTTG+V S
Sbjct: 482 CTDKTGTLTLNKMKVVEFWLGNEVIEDDT-YLEIAPSVLQLLKQGVGLNTTGSVCKLPST 540
Query: 420 STSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVF 479
S EI+GSPTE AIL+WA++DLGM++DE KQ C +++VEAFNSEKKRSGVL++ I ++
Sbjct: 541 SVPEISGSPTETAILTWAVVDLGMDIDEQKQSCEILHVEAFNSEKKRSGVLVRTITDQTI 600
Query: 480 HTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAE 539
THWKGAAEMIL CSHY+ K G +++D ++R Q II++MAAKSLRCIAFA+ + +
Sbjct: 601 QTHWKGAAEMILATCSHYFDKGGKTKLMDDDKRMQFGGIIRDMAAKSLRCIAFAYKQVLQ 660
Query: 540 ADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAI 599
+GQ EKLEETG+TLLGLVGLKDPCRPGVR AVE CR+AGV +KM+TGDN+ TA+AIA+
Sbjct: 661 ENGQSHEKLEETGMTLLGLVGLKDPCRPGVRRAVEDCRDAGVKIKMITGDNIFTAKAIAM 720
Query: 600 ECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKG 659
ECGIL PD D+N AV+EGV FR+ S EER+ KI+ IRVMARSSP DKLLMVQSLKQKG
Sbjct: 721 ECGILKPDEDMNN--AVVEGVTFRNFSDEERMEKIDMIRVMARSSPFDKLLMVQSLKQKG 778
Query: 660 HVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVY 719
HVVAVTGDGTNDAPAL+ ADIGLSMGIQGTEVAKESSDIVI+DDNF+SVVTVLRWGRCVY
Sbjct: 779 HVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVLRWGRCVY 838
Query: 720 NNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTN 779
NNIQKF+QFQLTVNVAALVINF AAVSSG VPLTAVQLLWVNLIMDTLGALALATE+PTN
Sbjct: 839 NNIQKFIQFQLTVNVAALVINFVAAVSSGDVPLTAVQLLWVNLIMDTLGALALATERPTN 898
Query: 780 DLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFNTF 839
DL+ K PVGR+KPLI+ +MWRNLI+QA+YQVA+LL LQFKG+ I V E VK+T+IFNTF
Sbjct: 899 DLLKKSPVGRTKPLISNVMWRNLIAQALYQVAVLLILQFKGKDIFNVDEKVKNTLIFNTF 958
Query: 840 VLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERLNWGQ 899
VLCQ+FNEFNAR +EKKN+FKGI KN+LFL IIG TI LQ+VMVEFLK FADT RLNWGQ
Sbjct: 959 VLCQVFNEFNARHMEKKNVFKGILKNRLFLGIIGFTIVLQVVMVEFLKRFADTVRLNWGQ 1018
Query: 900 WAACIGIAAMSWPIGFLIKCIPVSGKQLL 928
W ACI IA++SWPI +L+KC+PVSGK+ L
Sbjct: 1019 WGACIAIASLSWPIAWLVKCLPVSGKRFL 1047
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224130658|ref|XP_002328344.1| autoinhibited calcium ATPase [Populus trichocarpa] gi|222838059|gb|EEE76424.1| autoinhibited calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1395 bits (3610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/929 (74%), Positives = 799/929 (86%), Gaps = 26/929 (2%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVAS-ILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAK 60
L+ MVK K+ ESL LGGV QVA+ IL+ D K G + EA + HR +VFG NR+KKPPAK
Sbjct: 57 LADMVKGKNLESLKQLGGVTQVATTILETDVKNGAK--EAGVAHRRDVFGANRFKKPPAK 114
Query: 61 RFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSN 120
F+SFV EAFKD TIIILLVCA++SLGFGIKQ GLKEG N
Sbjct: 115 SFLSFVVEAFKDMTIIILLVCAIMSLGFGIKQHGLKEG--------------------CN 154
Query: 121 FKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHS 180
FKQS+QF+ L++ES++I V+VVRDGR LSIFDVVVG+VV LK GDQIPADG+FLNG+S
Sbjct: 155 FKQSKQFEKLSDESNNINVQVVRDGRHHHLSIFDVVVGDVVSLKIGDQIPADGMFLNGYS 214
Query: 181 LKVDESSMTGESDRVEVDEKN-PFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHEL 239
LKVDESSMTGESD VEV+ KN PFLLSGTKVT G+GFM+VTSVGM+TAWGEMMS I H+L
Sbjct: 215 LKVDESSMTGESDHVEVNGKNNPFLLSGTKVTDGFGFMVVTSVGMNTAWGEMMSLICHDL 274
Query: 240 NEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDV 299
+E+TPLQARLNKLTS IGK+GLTVAVLVLAV++IRYFTGNTRD G++E++G +TKF DV
Sbjct: 275 DEQTPLQARLNKLTSSIGKVGLTVAVLVLAVLMIRYFTGNTRDDNGRKEYIGSQTKFSDV 334
Query: 300 MNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTI 359
++SV+ IIA AVTI+VVAIPEGLPLAVTLTLA+SMKRMMKD+AMVRKLSACETMGSAT I
Sbjct: 335 LDSVVGIIAVAVTIVVVAIPEGLPLAVTLTLAYSMKRMMKDNAMVRKLSACETMGSATII 394
Query: 360 CTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSL 419
CTDKTGTLTLNQMKVTEFW G E + D + E+ +Y+LLQE V LNTTG V S++
Sbjct: 395 CTDKTGTLTLNQMKVTEFWPGNETIDDDYLT-EIESEVYQLLQEGVALNTTGTVNKSHAT 453
Query: 420 STSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVF 479
EITGSPTEKAILSWA++DLGMN++E K+ C +I+VE FNSEKKRSGVLM++ NEK
Sbjct: 454 LVPEITGSPTEKAILSWALLDLGMNINETKEECEIIHVETFNSEKKRSGVLMRKNNEKTI 513
Query: 480 HTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAE 539
HTHWKGAAEMIL MCS+YYV++G ++ L+ EE+ ++ IIQ MA+KSLRCIAFAH K AE
Sbjct: 514 HTHWKGAAEMILAMCSNYYVRNGELKSLNEEEKVELGAIIQSMASKSLRCIAFAHKKVAE 573
Query: 540 ADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAI 599
+GQ EKL+E+GL+LLG VGLKDPCRPGVR AVESC+NAGVNVKM+TGDNVHTARAIAI
Sbjct: 574 DNGQASEKLQESGLSLLGFVGLKDPCRPGVRTAVESCKNAGVNVKMITGDNVHTARAIAI 633
Query: 600 ECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKG 659
ECGIL+P+ D+ ++ AV+EGVQFR+ S EER+A I++I+VMARSSP DKLLMVQ LK+KG
Sbjct: 634 ECGILSPEQDM-ENGAVVEGVQFRNYSPEERMAMIDNIQVMARSSPFDKLLMVQCLKEKG 692
Query: 660 HVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVY 719
HVVAVTGDGTNDAPAL+ ADIGLSMGIQGTEVAKESSDIVI+DDNFSSVVTVLRWGRCVY
Sbjct: 693 HVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFSSVVTVLRWGRCVY 752
Query: 720 NNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTN 779
NNIQKF+QFQLTVNVAAL INF AA+SSGKVPLTAVQLLWVNLIMDTLGALALATEQPT
Sbjct: 753 NNIQKFIQFQLTVNVAALAINFVAAISSGKVPLTAVQLLWVNLIMDTLGALALATEQPTI 812
Query: 780 DLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFNTF 839
DLM++ PVGRS+PLITKIMWRNL++QA+YQV+ILLTLQFKG++I GV E +K+T++FNTF
Sbjct: 813 DLMARTPVGRSEPLITKIMWRNLVAQALYQVSILLTLQFKGKAIFGVDEKIKNTLVFNTF 872
Query: 840 VLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERLNWGQ 899
VLCQ+FNEFNARKLEKKNIFKGIHKNKLFLAIIG+TI LQ++MVE LK FA TERLNW Q
Sbjct: 873 VLCQVFNEFNARKLEKKNIFKGIHKNKLFLAIIGVTIILQVIMVELLKKFASTERLNWEQ 932
Query: 900 WAACIGIAAMSWPIGFLIKCIPVSGKQLL 928
W ACIGIA +SWPIG L+KCIPVS KQL+
Sbjct: 933 WGACIGIAVLSWPIGCLVKCIPVSSKQLM 961
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255542302|ref|XP_002512214.1| cation-transporting atpase plant, putative [Ricinus communis] gi|223548175|gb|EEF49666.1| cation-transporting atpase plant, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1393 bits (3606), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 691/926 (74%), Positives = 798/926 (86%), Gaps = 3/926 (0%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
LS+MVKEK+++SL+ LGG+ QVA++L CD K GI GSEADL R FG NRY KPPAK
Sbjct: 87 LSQMVKEKTYDSLNQLGGIMQVAALLQCDVKEGINGSEADLARRKEAFGANRYNKPPAKS 146
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNF 121
F+SFV EA KDTTIIILLVCA+LSL FG+KQ G K+GW+DGGSII A+FLVV VSAVSNF
Sbjct: 147 FLSFVLEALKDTTIIILLVCAILSLSFGMKQHGPKDGWYDGGSIIVAIFLVVVVSAVSNF 206
Query: 122 KQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
KQ+RQF L++E+ +I+V+VVRDGR + +SIFDVVVG+VV LK GDQIPADGLFL+G+SL
Sbjct: 207 KQARQFVKLSDETCNIKVQVVRDGRHQNISIFDVVVGDVVSLKIGDQIPADGLFLDGYSL 266
Query: 182 KVDESSMTGESDRVEV-DEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELN 240
K+DESSMTGESD VEV D +NPFLL GTKVT G+G MLVTSVGM+TAWGEMMSSIS L+
Sbjct: 267 KIDESSMTGESDHVEVNDSRNPFLLCGTKVTDGFGSMLVTSVGMNTAWGEMMSSISQNLD 326
Query: 241 EETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVM 300
EETPLQARLNKLTS+IGK GL VA+LVLAVM IRYFTGNT D G RE+ G KTK ++V+
Sbjct: 327 EETPLQARLNKLTSYIGKAGLAVALLVLAVMTIRYFTGNTTDEYGHREYNGSKTKVNNVL 386
Query: 301 NSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTIC 360
NSV+ IIAAAVTI+VVAIPEGLPLAVTLTLA+SMKRMM D+A+VR+LSACETMGSAT IC
Sbjct: 387 NSVVEIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMNDNALVRQLSACETMGSATMIC 446
Query: 361 TDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLS 420
TDKTGTLTLNQMKV EFWLGK+ ++ D S+E+ + LL+E V LNTT + S S S
Sbjct: 447 TDKTGTLTLNQMKVVEFWLGKDLIEDD-ISMEMEPKVSLLLEEGVALNTTAIIDKSQSTS 505
Query: 421 TSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFH 480
EI+GSPTEKAILSWA +DLGMN++E K+ C +INVE FNSE+KRSGV+M++ NEK H
Sbjct: 506 IPEISGSPTEKAILSWAALDLGMNINETKRKCEIINVETFNSERKRSGVMMRKNNEKAIH 565
Query: 481 THWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEA 540
THWKGAAEMI+ MCS YYV+SG + ++ EER Q + II M AKSLRCIAFAH K AE
Sbjct: 566 THWKGAAEMIVAMCSTYYVRSGELVDMNEEERKQFKDIIHSMGAKSLRCIAFAHRKVAEQ 625
Query: 541 DGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIE 600
+GQV L+ET TLLGLVGLKDPCRPGVRAAVESC+ A VNVKM+TGDN TARAIAIE
Sbjct: 626 NGQVSRMLDETECTLLGLVGLKDPCRPGVRAAVESCKKAEVNVKMITGDNPDTARAIAIE 685
Query: 601 CGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGH 660
CGILNP D++ +AV+EGV+FR+ S+EER+A+I+ IRVMARSSP DKLLMVQ LK+KGH
Sbjct: 686 CGILNPAEDVDY-KAVVEGVEFRNYSSEERMARIDDIRVMARSSPFDKLLMVQCLKEKGH 744
Query: 661 VVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYN 720
VVAVTGDGTNDAPALR ADIGLSMGIQGTEVAKESSDI+I+DDNF+SVVTVL+WGRCVYN
Sbjct: 745 VVAVTGDGTNDAPALREADIGLSMGIQGTEVAKESSDIIILDDNFTSVVTVLKWGRCVYN 804
Query: 721 NIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTND 780
NIQKF+QFQLTVN+AAL INF AA+SSGKVPLTAVQLLWVNLIMDT+GALALATEQPTND
Sbjct: 805 NIQKFIQFQLTVNIAALAINFVAAISSGKVPLTAVQLLWVNLIMDTMGALALATEQPTND 864
Query: 781 LMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFNTFV 840
LM+KPP GRS+PLIT IMWRNLI QA+YQVAILL LQF+G++I GV ESV +T+IFNTFV
Sbjct: 865 LMTKPPAGRSEPLITNIMWRNLIPQAMYQVAILLILQFEGKTIFGVNESVNNTIIFNTFV 924
Query: 841 LCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERLNWGQW 900
LCQ+FNEFNARKLEK+N+F+GIH+NKLFL IIGITI LQ+VMVE LK FA TERLNWGQW
Sbjct: 925 LCQVFNEFNARKLEKRNLFEGIHRNKLFLVIIGITIVLQVVMVELLKRFASTERLNWGQW 984
Query: 901 AACIGIAAMSWPIGFLIKCIPVSGKQ 926
ACIGIAA+SWPIG ++KCIPV KQ
Sbjct: 985 GACIGIAAVSWPIGCVVKCIPVYRKQ 1010
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255542300|ref|XP_002512213.1| cation-transporting atpase plant, putative [Ricinus communis] gi|223548174|gb|EEF49665.1| cation-transporting atpase plant, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1385 bits (3585), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 665/923 (72%), Positives = 791/923 (85%), Gaps = 5/923 (0%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L MVK +S ESL LGG QV +IL D K GI +EADL HR VFG NRY+KPP K
Sbjct: 75 LIDMVKNRSLESLHQLGGAKQVVAILLSDAKEGISDNEADLAHRREVFGANRYQKPPTKS 134
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNF 121
F SFVFEA KD+T+IIL VC++LSLGFGIKQ G K+GW+DGGSII A+ LV++VS+VSNF
Sbjct: 135 FFSFVFEALKDSTMIILSVCSVLSLGFGIKQHGPKDGWYDGGSIIVAIVLVIAVSSVSNF 194
Query: 122 KQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
KQS+QF+ L++ S+DI+V VVRDGR +SIFD+VVG+V+ LK GDQIPADGLFL+G+SL
Sbjct: 195 KQSKQFEKLSDVSNDIKVRVVRDGRHHSISIFDIVVGDVISLKIGDQIPADGLFLDGYSL 254
Query: 182 KVDESSMTGESDRVEVD-EKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELN 240
K+DESSMTGES+ VEVD +NPF+LSGTKV G+G M+VTSVGM+TAWGEMMSS++ L
Sbjct: 255 KLDESSMTGESEHVEVDGHRNPFVLSGTKVIDGFGSMIVTSVGMNTAWGEMMSSLTSNLE 314
Query: 241 EETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVM 300
E+TPLQARL++L S+IGK+GL+VA+LVLAV++IRYFTG+TRD G+REF G KTK DV+
Sbjct: 315 EQTPLQARLSELASYIGKVGLSVAILVLAVLMIRYFTGSTRDENGQREFNGSKTKVSDVL 374
Query: 301 NSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTIC 360
NSV+ I+AAAVTI+VVAIPEGLPL+VTLTLA+SMKRMMKD+AMVRKLSACETMGSATTIC
Sbjct: 375 NSVVGIVAAAVTILVVAIPEGLPLSVTLTLAYSMKRMMKDNAMVRKLSACETMGSATTIC 434
Query: 361 TDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLS 420
TDKTGTLTLNQMKV EFWLGKE+++ D S ++ +YELLQE + LNTTG V S++
Sbjct: 435 TDKTGTLTLNQMKVIEFWLGKESIE-DGTSSKIEPAIYELLQEGIALNTTGTVGKSHTSL 493
Query: 421 TSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFH 480
+EI+GSPTEKAILSWA+ DLG+ + E K C +I+VEAFNSEKKRSGV M++ N+K H
Sbjct: 494 DAEISGSPTEKAILSWAVFDLGIKIIETKLNCKIIHVEAFNSEKKRSGVWMRKSNDKTIH 553
Query: 481 THWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTK-AAE 539
THWKGAAEMIL MCS+YY+++G ++ ++ ++R Q E IIQ MAAKSLRCIAFAH K A+
Sbjct: 554 THWKGAAEMILAMCSNYYLRNGAVKAMNRDDRLQFETIIQSMAAKSLRCIAFAHKKLKAD 613
Query: 540 ADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAI 599
++ ++ EET TL+G+VGLKDPCRPGV AA+ESC+ AGV VKM+TGDN+HTAR +AI
Sbjct: 614 DRKELSKEPEETEFTLMGIVGLKDPCRPGVSAAIESCKKAGVIVKMITGDNLHTARTVAI 673
Query: 600 ECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKG 659
ECGIL+P+ D+ D AV+EGVQFR+ S E+R +KI+ IRVMARSSP DKLLMVQ LKQKG
Sbjct: 674 ECGILSPEDDM--DRAVVEGVQFRNFSPEDRTSKIDEIRVMARSSPFDKLLMVQCLKQKG 731
Query: 660 HVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVY 719
HVV VTGDGTNDAPAL+ ADIGL+MGIQGTEVAKES+DI+I+DDNFSSVVTVL+WGRCVY
Sbjct: 732 HVVGVTGDGTNDAPALKEADIGLAMGIQGTEVAKESADIIILDDNFSSVVTVLQWGRCVY 791
Query: 720 NNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTN 779
+NIQKFLQFQLTVNVAALVINF AAVSSG+VPLTAVQLLWVNLIMDTLGAL LATEQPT+
Sbjct: 792 SNIQKFLQFQLTVNVAALVINFAAAVSSGEVPLTAVQLLWVNLIMDTLGALGLATEQPTS 851
Query: 780 DLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFNTF 839
DLM K PVGR +PLITKIMWRNLI+QA+YQVAILL LQFK +SI GV E VK+T+IFNTF
Sbjct: 852 DLMEKKPVGRWEPLITKIMWRNLIAQALYQVAILLALQFKAQSIFGVNEKVKNTIIFNTF 911
Query: 840 VLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERLNWGQ 899
VLCQ+FNEFN+R +EKKNIFKGIH+NKLFL IIGITI LQ++MVE L FA TERLNWGQ
Sbjct: 912 VLCQVFNEFNSRNMEKKNIFKGIHRNKLFLVIIGITILLQVLMVELLTRFASTERLNWGQ 971
Query: 900 WAACIGIAAMSWPIGFLIKCIPV 922
W ACIGIAA++WPIGFL+KCIPV
Sbjct: 972 WGACIGIAALTWPIGFLVKCIPV 994
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147790888|emb|CAN63793.1| hypothetical protein VITISV_002789 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1349 bits (3491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/926 (70%), Positives = 776/926 (83%), Gaps = 12/926 (1%)
Query: 1 MLSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAK 60
ML++MV++K E L GGV Q+A++L + K GI G EADL HR NVFG N Y KPP K
Sbjct: 89 MLTEMVRDKDLERLRQFGGVKQLAALLGTNEKNGIDGHEADLIHRRNVFGSNEYTKPPKK 148
Query: 61 RFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSN 120
F+SFV EA KDTTIIILL+CA LSLGFGIK+ G +EGW+DGGSII A+ L+V+VS++SN
Sbjct: 149 GFLSFVVEASKDTTIIILLICAALSLGFGIKEEGPREGWYDGGSIIVAILLIVAVSSISN 208
Query: 121 FKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHS 180
F+QS QF ++ESSDIRV+VVR GRR+ +SIF +VVG++V L GDQ+PADGLF+ GHS
Sbjct: 209 FRQSGQFHKFSSESSDIRVQVVRQGRRQPVSIFQLVVGDIVFLNIGDQVPADGLFMEGHS 268
Query: 181 LKVDESSMTGESDRVEVDEK-NPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHEL 239
LKVDESSMTGESD VE++EK NPF+ SGTKV+ G+G MLVTSVGM+TAWGEMMSSI EL
Sbjct: 269 LKVDESSMTGESDHVEINEKENPFMFSGTKVSDGFGTMLVTSVGMNTAWGEMMSSIRREL 328
Query: 240 NEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDV 299
+E+TPLQARL+KL S IGK+GL VA++VL V+ IRYFTGN D G REF G KTK DDV
Sbjct: 329 DEQTPLQARLDKLASTIGKLGLAVALIVLVVLFIRYFTGNIEDDSGNREFNGSKTKIDDV 388
Query: 300 MNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTI 359
MNSV+++++AAVTI+V+AIPEGLP+AVTLTLA+SM+RMM D A+VRKLSACETMGS TTI
Sbjct: 389 MNSVVHLVSAAVTILVIAIPEGLPMAVTLTLAYSMRRMMTDQALVRKLSACETMGSVTTI 448
Query: 360 CTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSL 419
CTDKTGTLTLN+MKV EFWL E +K D +A + ELL++ VGLNTTG+V S
Sbjct: 449 CTDKTGTLTLNKMKVVEFWLESEVIK-DETYRGVAPTVLELLKQGVGLNTTGSVCKLPST 507
Query: 420 STSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVF 479
S EI+GSPTE AIL+WA++DLGM++DE K +++VEAFNS+KKRSGVL+ RI +
Sbjct: 508 SVPEISGSPTESAILTWALVDLGMDIDEQKLSFEILHVEAFNSQKKRSGVLVNRIADNTI 567
Query: 480 HTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAE 539
H HWKGAAEMIL MCSHYY KSG ++++D ++R Q +I++MAAKSLRCIAFA+ +A
Sbjct: 568 HIHWKGAAEMILAMCSHYYDKSGIVKVMDDKKRGQFGGLIRDMAAKSLRCIAFAYKQA-- 625
Query: 540 ADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAI 599
+QEKLEETG+ LLGLVGLKDPCRPGVR AVE CR+AGVNVKM+TGDN+ TA+AIA+
Sbjct: 626 ----LQEKLEETGMILLGLVGLKDPCRPGVRRAVEVCRDAGVNVKMITGDNIFTAKAIAM 681
Query: 600 ECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKG 659
ECGIL PD D N AV+EGV FR+ S ER+ KI+ IRVMARSSP DKLLMVQSLK+KG
Sbjct: 682 ECGILKPDEDFNN--AVVEGVTFRNYSHRERMDKIDIIRVMARSSPFDKLLMVQSLKKKG 739
Query: 660 HVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVY 719
HVVAVTGDGTNDAPAL+ ADIGLSMGIQGTEVAKESSDIVI+DDNF+SVVTV++WGRCVY
Sbjct: 740 HVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVMKWGRCVY 799
Query: 720 NNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTN 779
NN+QKF+QFQLT+NVAAL INF AAV+SGKVPLTAVQLLWVNLI DT GALALATEQPTN
Sbjct: 800 NNLQKFIQFQLTINVAALGINFVAAVASGKVPLTAVQLLWVNLIQDTFGALALATEQPTN 859
Query: 780 DLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFNTF 839
DL+ KPPVGRSKPLIT +MWRNLISQA+YQ+++LL LQ+KG SI GV E + +T+IFNTF
Sbjct: 860 DLLMKPPVGRSKPLITNVMWRNLISQALYQISVLLILQYKGSSIFGVDEKINNTLIFNTF 919
Query: 840 VLCQIFNEFNARKLEKKN--IFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERLNW 897
VLCQ+FNEFNAR ++KKN FKGI KN+LF+ IIGITIALQ+VMVEFLK FA+TERL+W
Sbjct: 920 VLCQVFNEFNARNMDKKNKFFFKGILKNRLFVGIIGITIALQVVMVEFLKRFANTERLDW 979
Query: 898 GQWAACIGIAAMSWPIGFLIKCIPVS 923
GQW CIG+AA+SWPI +L+K +PVS
Sbjct: 980 GQWGVCIGLAALSWPIDWLVKYLPVS 1005
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451326|ref|XP_002274001.1| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1343 bits (3476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 646/926 (69%), Positives = 775/926 (83%), Gaps = 12/926 (1%)
Query: 1 MLSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAK 60
ML++MV++K E L GGV Q+ ++L + K GI G EADL HR NVFG N Y KPP K
Sbjct: 89 MLTEMVRDKDLERLRQFGGVKQLPALLGTNEKNGIDGHEADLIHRRNVFGSNEYTKPPKK 148
Query: 61 RFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSN 120
F+SFV EA KDTTIIILL+CA LSLGFGIK+ G +EGW+DGGSII A+ L+V+VS++SN
Sbjct: 149 GFLSFVVEASKDTTIIILLICAALSLGFGIKEEGPREGWYDGGSIIVAILLIVAVSSISN 208
Query: 121 FKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHS 180
F+QS QF ++ESSDIRV+VVR GRR+ +SIF +VVG++V L GDQ+PADGLF+ GHS
Sbjct: 209 FRQSGQFHKFSSESSDIRVQVVRQGRRQPVSIFQLVVGDIVFLNIGDQVPADGLFMEGHS 268
Query: 181 LKVDESSMTGESDRVEVDEK-NPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHEL 239
LKVDESSMTGESD VE++EK NPF+ SGTKV+ G+G MLVTSVGM+TAWGEMMSSI EL
Sbjct: 269 LKVDESSMTGESDHVEINEKENPFMFSGTKVSDGFGTMLVTSVGMNTAWGEMMSSIRREL 328
Query: 240 NEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDV 299
+E+TPLQARL+KL S IGK+GL VA++VL V+ IRYFTGN D G REF G KTK D+V
Sbjct: 329 DEQTPLQARLDKLASTIGKLGLAVALIVLVVLFIRYFTGNIEDDSGNREFNGSKTKIDNV 388
Query: 300 MNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTI 359
MNSV+++++AAVT++V+AIPEGLP+AVTLTLA+SM+RMM D A+VRKLSACETMGS TTI
Sbjct: 389 MNSVVHLVSAAVTVLVIAIPEGLPMAVTLTLAYSMRRMMTDQALVRKLSACETMGSVTTI 448
Query: 360 CTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSL 419
CTDKTGTLTLN+MKV EFWL E +K D +A + ELL++ VGLNTTG+V S
Sbjct: 449 CTDKTGTLTLNKMKVVEFWLESEVIK-DETYRGVAPTVLELLKQGVGLNTTGSVCKLPST 507
Query: 420 STSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVF 479
S EI+GSPTE AIL+WA++DLGM++DE K +++VEAFNS+KKRSGVL+ RI +
Sbjct: 508 SVPEISGSPTESAILTWALVDLGMDIDEQKLSFEILHVEAFNSQKKRSGVLVNRIADNTI 567
Query: 480 HTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAE 539
H HWKGAAEMIL MCSHYY KSG ++++D ++R Q +I++MAAKSLRCIAFA+ +A
Sbjct: 568 HIHWKGAAEMILAMCSHYYDKSGIVKVMDDKKRGQFGGLIRDMAAKSLRCIAFAYKQA-- 625
Query: 540 ADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAI 599
+QEKLEETG+ LLGLVGLKDPCRPGVR AVE CR+AGVNVKM+TGDN+ TA+AIA+
Sbjct: 626 ----LQEKLEETGMILLGLVGLKDPCRPGVRRAVEVCRDAGVNVKMITGDNIFTAKAIAM 681
Query: 600 ECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKG 659
ECGIL PD D N AV+EGV FR+ S ER+ KI+ IRVMARSSP DKLLMVQSLK+KG
Sbjct: 682 ECGILKPDEDFNN--AVVEGVTFRNYSHRERMDKIDIIRVMARSSPFDKLLMVQSLKKKG 739
Query: 660 HVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVY 719
HVVAVTGDGTNDAPAL+ ADIGLSMGIQGTEVAKESSDIVI+DDNF+SVVTV++WGRCVY
Sbjct: 740 HVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVMKWGRCVY 799
Query: 720 NNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTN 779
NN+QKF+QFQLT+NVAAL INF AAV+SGKVPLTAVQLLWVNLI DT GALALATEQPTN
Sbjct: 800 NNLQKFIQFQLTINVAALGINFVAAVASGKVPLTAVQLLWVNLIQDTFGALALATEQPTN 859
Query: 780 DLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFNTF 839
DL+ KPPVGRSKPLIT +MWRNLISQA+YQ+++LL LQ+KG SI GV E + +T+IFNTF
Sbjct: 860 DLLMKPPVGRSKPLITNVMWRNLISQALYQISVLLILQYKGSSIFGVDEKINNTLIFNTF 919
Query: 840 VLCQIFNEFNARKLEKKN--IFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERLNW 897
VLCQ+FNEFNAR ++KKN FKGI KN+LF+ IIGITIALQ+VMVEFLK FA+TERL+W
Sbjct: 920 VLCQVFNEFNARNMDKKNKFFFKGILKNRLFVGIIGITIALQVVMVEFLKRFANTERLDW 979
Query: 898 GQWAACIGIAAMSWPIGFLIKCIPVS 923
GQW CIG+AA+SWPI +L+K +PVS
Sbjct: 980 GQWGVCIGLAALSWPIDWLVKYLPVS 1005
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432828|ref|XP_002279593.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1317 bits (3409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/931 (70%), Positives = 772/931 (82%), Gaps = 8/931 (0%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L+ +VKEK+ + L LGGV VA L DTK GI G+ D+ R FG N Y +PP K
Sbjct: 80 LTAVVKEKNLDQLRELGGVEGVADALKTDTKNGIHGAVEDVAERQETFGSNTYPRPPTKS 139
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNF 121
F FV EAFKD TI+ILL CA LSLGFGIK+ GLKEGW+DGGSI AVFLV+SVSAVSNF
Sbjct: 140 FFYFVLEAFKDLTILILLACATLSLGFGIKEHGLKEGWYDGGSIFVAVFLVISVSAVSNF 199
Query: 122 KQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
+Q+RQF+ L+ S++I VEVVRDG R+ +SIF++VVG+VVCLK GDQ+PADGLFL+GHSL
Sbjct: 200 RQNRQFEKLSKVSNNIEVEVVRDGHRQKISIFEIVVGDVVCLKIGDQVPADGLFLDGHSL 259
Query: 182 KVDESSMTGESDRVEVDE-KNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELN 240
+VDESSMTGESD V+V+ +NPFL SGTKV GY MLVTSVGM+T WGEMMS+IS +N
Sbjct: 260 QVDESSMTGESDHVQVNSTQNPFLFSGTKVADGYAQMLVTSVGMNTIWGEMMSTISRNIN 319
Query: 241 EETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVM 300
E+TPLQARLNKLTS IGK+GL +A LVL V+++RYFT NT D G +EF G KTK DD++
Sbjct: 320 EQTPLQARLNKLTSSIGKVGLAIAFLVLVVLVVRYFTRNTEDENGNQEFYGSKTKADDIV 379
Query: 301 NSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTIC 360
N+++ IIAAAVTI+VVAIPEGLPLAVTLTLA+SMK+MM D AMVRKL ACETMGSATTIC
Sbjct: 380 NAMVRIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLPACETMGSATTIC 439
Query: 361 TDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLS 420
TDKTGTLTLNQMKVTE+WLGKE ++ S +A N+ +L+Q+ V LNTTG++Y + S S
Sbjct: 440 TDKTGTLTLNQMKVTEYWLGKEPVED---SSSIASNVLKLIQQGVALNTTGSIYRATSGS 496
Query: 421 TSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFH 480
E +GSPTEKAILSWA+++L M+++ KQ T+++VEAFNSEKKRSG+LM++ + H
Sbjct: 497 EFEFSGSPTEKAILSWAVLELDMDMERLKQNHTILHVEAFNSEKKRSGILMRKKADNKMH 556
Query: 481 THWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEA 540
HWKGAAEMIL MCS YY SG+++ LD ER E+IIQ MAA SLRCIAFAH + E
Sbjct: 557 VHWKGAAEMILAMCSSYYDASGSMKDLDDAERMTFEQIIQGMAASSLRCIAFAHKQIPEE 616
Query: 541 DGQVQE---KLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAI 597
+ ++ E +L E LTL+GLVG+KDPCRPGVR AVE C+ AGVNVKM+TGDNV TARAI
Sbjct: 617 EQEISEGCQRLTEDSLTLIGLVGIKDPCRPGVRKAVEDCQYAGVNVKMITGDNVFTARAI 676
Query: 598 AIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQ 657
A ECGIL PD D+N EAV+EG FR + EER+ K++ I VMARSSP DKLLMVQ LK
Sbjct: 677 ATECGILRPDRDMN-SEAVVEGEVFRKYTPEERMEKVDKICVMARSSPFDKLLMVQCLKL 735
Query: 658 KGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRC 717
KGHVVAVTGDGTNDAPAL+ ADIGLSMGIQGTEVAKESSDI+I+DDNF+SV TVLRWGRC
Sbjct: 736 KGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFASVATVLRWGRC 795
Query: 718 VYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQP 777
VYNNIQKF+QFQLTVNVAALVINF AAVS+G+VPLTAVQLLWVNLIMDTLGALALATEQP
Sbjct: 796 VYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEQP 855
Query: 778 TNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFN 837
T +LM KPPVGR++PLI+ IMWRN+++QA+YQ+A+LLTLQF+G SI GV E VK+T+IFN
Sbjct: 856 TRELMEKPPVGRTEPLISNIMWRNILAQALYQIAVLLTLQFRGESIFGVSEKVKNTLIFN 915
Query: 838 TFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERLNW 897
TFVLCQ+FNEFNARKLEKKN+FKG+HKNKLFL IIG+TI LQ+VMVEFLK FADTERLNW
Sbjct: 916 TFVLCQVFNEFNARKLEKKNVFKGLHKNKLFLGIIGMTIILQVVMVEFLKKFADTERLNW 975
Query: 898 GQWAACIGIAAMSWPIGFLIKCIPVSGKQLL 928
GQW ACIGIAA SWPIG+++K IPVS K L
Sbjct: 976 GQWGACIGIAAASWPIGWVVKGIPVSDKPFL 1006
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432836|ref|XP_002279818.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1316 bits (3405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 658/931 (70%), Positives = 774/931 (83%), Gaps = 8/931 (0%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L+ +VKEKS + L LGGV VA L TK GI G+ D+ R FG N Y +PP K
Sbjct: 80 LTAVVKEKSLDQLRELGGVEGVADALKTHTKNGIHGAVEDVAERQETFGSNTYPRPPTKS 139
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNF 121
F FV EAFKD TI+ILL CA LSLGFGIK+ GLKEGW+DGGSI AVFLV+SVSAVSNF
Sbjct: 140 FFYFVLEAFKDLTILILLACATLSLGFGIKEHGLKEGWYDGGSIFVAVFLVISVSAVSNF 199
Query: 122 KQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
+Q+RQ + L+ S++I VEVVRDG R+ +SIF +VVG+V CLK GDQ+PADGLFL GHSL
Sbjct: 200 RQNRQLETLSKVSNNIEVEVVRDGHRQKISIFGIVVGDVACLKIGDQVPADGLFLAGHSL 259
Query: 182 KVDESSMTGESDRVEVDE-KNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELN 240
+VDESSMTGESD VE++ +NPFL SGTKV GY MLVTSVGM+T WGEMMS+ISH+ N
Sbjct: 260 QVDESSMTGESDHVEINSSQNPFLFSGTKVADGYAQMLVTSVGMNTTWGEMMSTISHDNN 319
Query: 241 EETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVM 300
E+TPLQARLNKLTS IGK+GL VA LVL ++++RYFTGNT D G +EF G KTK DD++
Sbjct: 320 EQTPLQARLNKLTSSIGKVGLAVAFLVLVMLVVRYFTGNTEDENGNQEFNGSKTKADDIV 379
Query: 301 NSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTIC 360
N+++ IIAAAVTI+VVAIPEGLPLAVTLTLA+SMKRMM D AMVRKLSACETMGSATTIC
Sbjct: 380 NAMVRIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATTIC 439
Query: 361 TDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLS 420
TDKTGTLTLNQMKVT++WLGKE ++ S +A N+ +L+Q+ V LNTTG++Y + S S
Sbjct: 440 TDKTGTLTLNQMKVTKYWLGKEPVED---SSSIATNILKLIQQGVALNTTGSIYRATSKS 496
Query: 421 TSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFH 480
E +GSPTEKA+LSWA+++L M+++ KQ T+++VEAFNSEKKRSG+LM++ + H
Sbjct: 497 EFEFSGSPTEKALLSWAVLELDMDMERLKQNYTILHVEAFNSEKKRSGILMRKKADNKIH 556
Query: 481 THWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEA 540
HWKGAAEMIL MCS YY SG+++ LD ER E+IIQ MAA SLRCIAFAH + E
Sbjct: 557 VHWKGAAEMILAMCSSYYDASGSMKELDDGERMTFEQIIQGMAASSLRCIAFAHEQIPEE 616
Query: 541 DGQVQE---KLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAI 597
+ +++E KL+E LTL+GLVG+KDPCRPGVR AVE C+ AGVNVKM+TGDNV TARAI
Sbjct: 617 EQEIREGRQKLKEDSLTLIGLVGIKDPCRPGVRKAVEDCQYAGVNVKMITGDNVFTARAI 676
Query: 598 AIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQ 657
A ECGIL PD D+N EAV+EG FR ++EER+ K++ I VMARSSP DKLLMVQ LKQ
Sbjct: 677 ATECGILRPDQDMN-SEAVVEGEIFRKYTSEERMEKVDKICVMARSSPFDKLLMVQCLKQ 735
Query: 658 KGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRC 717
KGHVVAVTGDGTNDAPAL+ ADIGLSMGIQGTEVAKE SDI+I+DDNF+SV TVLRWGRC
Sbjct: 736 KGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKEGSDIIILDDNFASVATVLRWGRC 795
Query: 718 VYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQP 777
VY+NIQKF+QFQLTVNVAALVINF AAVS+G+VPLTAVQLLWVNLIMDTLGALALATEQP
Sbjct: 796 VYDNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEQP 855
Query: 778 TNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFN 837
T +LM KPP+GR +PLI+ +MWRNL++QA+YQ+AILLTLQFKGRSI GV E VKDT+IFN
Sbjct: 856 TKELMEKPPMGRKEPLISNVMWRNLLAQALYQIAILLTLQFKGRSIFGVSEKVKDTLIFN 915
Query: 838 TFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERLNW 897
TFVLCQ+FNEFNARKLEKKN+FKG+HKNKLFL IIGITI LQ+VMVEFLK FADTERL+W
Sbjct: 916 TFVLCQVFNEFNARKLEKKNVFKGLHKNKLFLGIIGITIILQVVMVEFLKKFADTERLDW 975
Query: 898 GQWAACIGIAAMSWPIGFLIKCIPVSGKQLL 928
GQW ACIGIAA SWPIG+++KCIPVS K L
Sbjct: 976 GQWGACIGIAAASWPIGWVVKCIPVSDKPFL 1006
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432826|ref|XP_002279567.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1309 bits (3387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 652/931 (70%), Positives = 779/931 (83%), Gaps = 6/931 (0%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L+++VK KS L LGGV VA +L+ D + GI G+ + R FG N Y++PP K
Sbjct: 74 LTQIVKHKSLTQLLELGGVEGVAIVLETDAENGIHGAVEGVTCRRKAFGSNTYQEPPTKS 133
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNF 121
F FV EAFKD TI+IL+ CA LSLGFGIK+ GLKEGW+DGGSI+ AVFLV+SVSAVSNF
Sbjct: 134 FFYFVVEAFKDVTILILVACATLSLGFGIKEEGLKEGWYDGGSILVAVFLVISVSAVSNF 193
Query: 122 KQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
+Q+RQF L+ S++I+V+VVRDGRR+ +SIF+VVVG+VVCLK GDQ+PADGLF +GHSL
Sbjct: 194 RQNRQFDKLSKVSNNIQVDVVRDGRRQQISIFEVVVGDVVCLKIGDQVPADGLFQDGHSL 253
Query: 182 KVDESSMTGESDRVEVDEK-NPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELN 240
+VDESSMTGESD VEVD NPFL SGT+V GY MLVTSVGM+TAWGEMMS+IS + N
Sbjct: 254 QVDESSMTGESDHVEVDTSLNPFLFSGTRVADGYARMLVTSVGMNTAWGEMMSTISRDAN 313
Query: 241 EETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVM 300
E+TPLQARLNKLTS IGK+GL VA LVL V+L+RYFTG+T D G +EF G TK DD++
Sbjct: 314 EQTPLQARLNKLTSSIGKVGLAVAFLVLTVLLVRYFTGSTEDENGNQEFKGSLTKADDIV 373
Query: 301 NSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTIC 360
N+V+ IIAAAVTI+VVAIPEGLPLAVTLTLA+SMKRMM D AMVR+LSACETMGSATTIC
Sbjct: 374 NAVVRIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRRLSACETMGSATTIC 433
Query: 361 TDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLS 420
TDKTGTLTLNQMKVT+FWLG++ ++ +A S +A ++ +L+Q+ V LNTTG++Y + S S
Sbjct: 434 TDKTGTLTLNQMKVTKFWLGQDPIQENASS-SIATDVLKLIQQGVALNTTGSIYRATSGS 492
Query: 421 TSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFH 480
E +GSPTEKAILSWA+++L M+++E KQ CT++ VEAFNSEKK+SGV ++ + H
Sbjct: 493 KYEFSGSPTEKAILSWAVLELNMDMEELKQTCTILRVEAFNSEKKQSGVALRNKADNKVH 552
Query: 481 THWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEA 540
HWKGAAEMIL MCS YY SG++R L ERT E+IIQ MAA SLRCIAFAH + E
Sbjct: 553 VHWKGAAEMILEMCSTYYDASGSMRDLGHVERTTFEQIIQGMAASSLRCIAFAHNQLPEE 612
Query: 541 DGQVQE---KLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAI 597
+ +++E KL+E LTL+GLVG+KDPCRPGVR AVE C++AGVNVKM+TGDN+ TARAI
Sbjct: 613 EHEIREATQKLKEDSLTLIGLVGIKDPCRPGVRKAVEDCQHAGVNVKMITGDNIFTARAI 672
Query: 598 AIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQ 657
A ECGIL PD D+N +EAV+EG F + +ER+ K++ IRVMARSSP DKLLMVQ LKQ
Sbjct: 673 ATECGILRPDQDMN-NEAVVEGEVFWQYTPDERMEKVDKIRVMARSSPFDKLLMVQCLKQ 731
Query: 658 KGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRC 717
KGHVVAVTGDGTNDAPAL+ ADIGLSMGIQGTEVAKESSDI+I+DDNF+SV TVLRWGRC
Sbjct: 732 KGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFASVATVLRWGRC 791
Query: 718 VYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQP 777
VYNNIQKF+QFQLTVNVAALVINF AAVS+G++PLTAVQLLWVNLIMDTLGALALATEQP
Sbjct: 792 VYNNIQKFIQFQLTVNVAALVINFVAAVSAGEIPLTAVQLLWVNLIMDTLGALALATEQP 851
Query: 778 TNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFN 837
T +LM KPP+GR++PLI+ IMWRNL++QA+YQ+A+LLTLQFKG SI GV + VKDT+IFN
Sbjct: 852 TKELMEKPPMGRTEPLISNIMWRNLLAQALYQIAVLLTLQFKGESIFGVSKKVKDTLIFN 911
Query: 838 TFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERLNW 897
TFVLCQ+FNEFNAR+LEKK IFKG+HKNKLFL IIGITI LQ+VMVEFLK FADTERL+W
Sbjct: 912 TFVLCQVFNEFNARELEKKTIFKGLHKNKLFLGIIGITIILQVVMVEFLKKFADTERLDW 971
Query: 898 GQWAACIGIAAMSWPIGFLIKCIPVSGKQLL 928
GQW ACIGIAA SWPIG+++K IPVS K +
Sbjct: 972 GQWGACIGIAAASWPIGWVVKSIPVSDKPFI 1002
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432838|ref|XP_002279864.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1308 bits (3385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 653/932 (70%), Positives = 773/932 (82%), Gaps = 9/932 (0%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L+++VKEK+ + L GGV VA L+ D K GI G+ D+ R FG N YK+PP K
Sbjct: 80 LTEIVKEKNLKLLLESGGVEGVADALETDIKNGISGAVDDVALRQEAFGSNTYKRPPTKS 139
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNF 121
FV EAFKD TI+ILL CA LSLGFGIK+ GLKEGW+DGGSI AV LV+SVSAVSNF
Sbjct: 140 LFHFVVEAFKDLTILILLFCAALSLGFGIKEHGLKEGWYDGGSIFVAVILVISVSAVSNF 199
Query: 122 KQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
+Q+RQF+ L+ S++I+++V R+GRR+ +SIF++VVG+VV LK GDQ+PADGLFL+GHSL
Sbjct: 200 RQNRQFEKLSKVSNNIKIDVFRNGRRQQISIFEIVVGDVVSLKIGDQVPADGLFLDGHSL 259
Query: 182 KVDESSMTGESDRVEVDE-KNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELN 240
+VDESSMTGESD VEV+ NPFL SGTKV GY MLVTSVGM+T WG+MMS+IS + N
Sbjct: 260 QVDESSMTGESDHVEVNSSHNPFLFSGTKVADGYAQMLVTSVGMNTTWGQMMSTISRDTN 319
Query: 241 EETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVM 300
E+TPLQARLNKLTS IGK GL VA LVL V+L+RYFTGNT D G +EF G KTK DD++
Sbjct: 320 EQTPLQARLNKLTSSIGKAGLAVAFLVLLVLLVRYFTGNTEDENGNQEFNGSKTKADDIV 379
Query: 301 NSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTIC 360
N+V+ IIA AVTI+VVAIPEGLPLAVTLTLA+SMKRMM D AMVRKLSACETMGSATTIC
Sbjct: 380 NAVVEIIATAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATTIC 439
Query: 361 TDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLS 420
TDKTGTLT+NQMKVT+ WLG+E ++ S +++NL L+Q+ V LNTTG+VY + S S
Sbjct: 440 TDKTGTLTMNQMKVTKIWLGQEPIE---VSSSISENLLNLIQQGVALNTTGSVYRATSGS 496
Query: 421 TS-EITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVF 479
E GSPTEKAILSWA+++L M+++ KQ CT+++VEAFNSEKKRSGV ++ +
Sbjct: 497 YKFEFFGSPTEKAILSWAVLELDMDMEILKQNCTILHVEAFNSEKKRSGVSIRSKADNTI 556
Query: 480 HTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAE 539
H HWKGAAEMIL MCS YY SG+++ LD ER E+IIQ MAA SLRCIAFAH + E
Sbjct: 557 HVHWKGAAEMILAMCSSYYDASGSMKDLDDCERKTFEQIIQGMAASSLRCIAFAHKQILE 616
Query: 540 ADGQVQE---KLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARA 596
+ +++E KL+E GL +GLVG+KDPCRPGVR AVE C++AGVNVKM+TGDNV TARA
Sbjct: 617 EEHEIREATQKLKEDGLAFVGLVGIKDPCRPGVRKAVEDCQHAGVNVKMITGDNVFTARA 676
Query: 597 IAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLK 656
IA ECGIL PD +N +EAV+EG FR+ + EER+ K++ IRVMARSSP DKLLMVQ LK
Sbjct: 677 IATECGILRPDQGIN-NEAVVEGEVFRNYTPEERMEKVDKIRVMARSSPFDKLLMVQCLK 735
Query: 657 QKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGR 716
Q GHVVAVTGDGTNDAPAL+ ADIGLSMGIQGTEVAKESSDI+I+DDNF+SV TVLRWGR
Sbjct: 736 QNGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFASVATVLRWGR 795
Query: 717 CVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQ 776
CVYNNIQKF+QFQLTVNVAALVINF AAVS+G+VPLTAVQLLWVNLIMDTLGALALATEQ
Sbjct: 796 CVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEQ 855
Query: 777 PTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIF 836
PTN+LM +PPVGR+ PLIT IMWRNL++QA+YQ+A+LLTLQFKG SI GV E VKDT+IF
Sbjct: 856 PTNELMDRPPVGRTGPLITNIMWRNLLAQAMYQIAVLLTLQFKGESIFGVSEKVKDTLIF 915
Query: 837 NTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERLN 896
NTFVLCQ+FNEFNAR+LEKKN+F+GIHKNKLFL IIGITI LQ+VMVEFLK FADTERLN
Sbjct: 916 NTFVLCQVFNEFNARRLEKKNVFEGIHKNKLFLGIIGITIILQVVMVEFLKKFADTERLN 975
Query: 897 WGQWAACIGIAAMSWPIGFLIKCIPVSGKQLL 928
WGQW AC+GIAA+SWP+G+++KCIPVS K L
Sbjct: 976 WGQWGACLGIAAVSWPLGWVVKCIPVSNKPFL 1007
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 941 | ||||||
| TAIR|locus:2087363 | 1033 | AT3G63380 [Arabidopsis thalian | 0.971 | 0.884 | 0.607 | 6.3e-298 | |
| TAIR|locus:2084578 | 1017 | AT3G22910 [Arabidopsis thalian | 0.969 | 0.896 | 0.609 | 3.6e-295 | |
| TAIR|locus:2175579 | 1074 | ACA8 ""autoinhibited Ca2+ -ATP | 0.968 | 0.848 | 0.522 | 5.5e-244 | |
| TAIR|locus:2123924 | 1069 | ACA10 "autoinhibited Ca(2+)-AT | 0.968 | 0.852 | 0.520 | 5.6e-242 | |
| TAIR|locus:2094726 | 1086 | ACA9 "autoinhibited Ca(2+)-ATP | 0.974 | 0.844 | 0.518 | 1.3e-240 | |
| TAIR|locus:2062673 | 1030 | ACA4 ""autoinhibited Ca(2+)-AT | 0.958 | 0.875 | 0.433 | 1.5e-195 | |
| TAIR|locus:2029794 | 1020 | ACA1 "autoinhibited Ca2+-ATPas | 0.959 | 0.885 | 0.438 | 4.1e-191 | |
| TAIR|locus:2059201 | 1015 | ACA7 "auto-regulated Ca2+-ATPa | 0.961 | 0.891 | 0.445 | 2.1e-187 | |
| TAIR|locus:2120096 | 1014 | ACA2 "calcium ATPase 2" [Arabi | 0.961 | 0.892 | 0.436 | 3.9e-186 | |
| DICTYBASE|DDB_G0289473 | 1077 | DDB_G0289473 "Ca2+-ATPase" [Di | 0.558 | 0.488 | 0.406 | 4.6e-163 |
| TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2860 (1011.8 bits), Expect = 6.3e-298, P = 6.3e-298
Identities = 561/923 (60%), Positives = 696/923 (75%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L +++K K + LGGV VA+ L + GI G+E ++ R ++FG N Y KPP K
Sbjct: 93 LVEIMKGKDLPGIQALGGVEGVAASLRTNPTKGIHGNEQEVSRRRDLFGSNTYHKPPPKG 152
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGXXXXXXXXXXXXXXXXNF 121
+ FV+EAFKD TI+ILLVCA+ SLGFGIK+ G+KEGW++GG NF
Sbjct: 153 LLFFVYEAFKDLTILILLVCAIFSLGFGIKEHGIKEGWYEGGSIFVAVFLVIVVSALSNF 212
Query: 122 KQSRQFQALANESSDIXXXXXXXXXXXXLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
+Q RQF L+ S++I +SIFDVVVG+VV LK GDQIPADGLFL GHSL
Sbjct: 213 RQERQFDKLSKISNNIKVEVLRDSRRQHISIFDVVVGDVVFLKIGDQIPADGLFLEGHSL 272
Query: 182 KVDESSMTGESDRVEVDEK-NPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELN 240
+VDESSMTGESD +EVD K NPFL SGTK+ G+ MLV SVGMST WG+ MSSI+ + +
Sbjct: 273 QVDESSMTGESDHLEVDHKDNPFLFSGTKIVDGFAQMLVVSVGMSTTWGQTMSSINQDSS 332
Query: 241 EETPLQARLNKLTSWIGKIGXXXXXXXXXXXXIRYFTGNTRDGMGKREFVGGKTKFDDVM 300
E TPLQ RL+ LTS IGKIG +RYFTGNT + GKRE+ G KT D V+
Sbjct: 333 ERTPLQVRLDTLTSTIGKIGLTVAALVLVVLLVRYFTGNT-EKEGKREYNGSKTPVDTVV 391
Query: 301 NSXXXXXXXXXXXXXXXXPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTIC 360
NS PEGLPLAVTLTLA+SMKRMM D AMVRKLSACETMGSAT IC
Sbjct: 392 NSVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMSDQAMVRKLSACETMGSATVIC 451
Query: 361 TDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLS 420
TDKTGTLTLN+MKVT+FWLG+E++ D+ + ++ ++ +LL + GLNTTG+V S+S S
Sbjct: 452 TDKTGTLTLNEMKVTKFWLGQESIHEDSTKM-ISPDVLDLLYQGTGLNTTGSVCVSDSGS 510
Query: 421 TSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFH 480
T E +GSPTEKA+LSW +++LGM+++ KQ V+ VE F+S KKRSGVL++R ++ H
Sbjct: 511 TPEFSGSPTEKALLSWTVLNLGMDMESVKQKHEVLRVETFSSAKKRSGVLVRRKSDNTVH 570
Query: 481 THWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEA 540
HWKGAAEM+L MCSHYY +G++ ++D +++I+ IIQ MAA SLRCIAFAH K A
Sbjct: 571 VHWKGAAEMVLAMCSHYYTSTGSVDLMDSTAKSRIQAIIQGMAASSLRCIAFAH-KIASN 629
Query: 541 DGQVQXXXXXXXXXXXXXXXXXDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIE 600
D ++ DPCRPGV AVE+C+ AGV +KM+TGDNV TA+AIA E
Sbjct: 630 DSVLEEDGLTLMGIVGLK----DPCRPGVSKAVETCKLAGVTIKMITGDNVFTAKAIAFE 685
Query: 601 CGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGH 660
CGIL+ + D ++++AV+EGVQFR+ + EER+ K++ IRVMARSSP DKLLMV+ L+ KGH
Sbjct: 686 CGILDHN-DKDEEDAVVEGVQFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLKGH 744
Query: 661 VVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYN 720
VVAVTGDGTNDAPAL+ ADIGLSMGIQGTEVAKESSDIVI+DDNF+SV TVL+WGRCVYN
Sbjct: 745 VVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYN 804
Query: 721 NIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTND 780
NIQKF+QFQLTVNVAALVINF AA+S+G+VPLTAVQLLWVNLIMDTLGALALATE+PTN+
Sbjct: 805 NIQKFIQFQLTVNVAALVINFIAAISAGEVPLTAVQLLWVNLIMDTLGALALATERPTNE 864
Query: 781 LMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFNTFV 840
L+ + PVGR++ LIT +MWRNL+ Q++YQ+A+LL LQFKG SI V++ VKDT+IFNTFV
Sbjct: 865 LLKRKPVGRTEALITNVMWRNLLVQSLYQIAVLLILQFKGMSIFSVRKEVKDTLIFNTFV 924
Query: 841 LCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERLNWGQW 900
LCQ+FNEFNAR++EKKN+FKG+H+N+LF+ II ITI LQ++MVEFLK FADT RLN QW
Sbjct: 925 LCQVFNEFNAREMEKKNVFKGLHRNRLFIGIIAITIVLQVIMVEFLKKFADTVRLNGWQW 984
Query: 901 AACIGIAAMSWPIGFLIKCIPVS 923
CI +A++SWPIGF K IPVS
Sbjct: 985 GTCIALASLSWPIGFFTKFIPVS 1007
|
|
| TAIR|locus:2084578 AT3G22910 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2834 (1002.7 bits), Expect = 3.6e-295, P = 3.6e-295
Identities = 563/924 (60%), Positives = 688/924 (74%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L+ +VK K+ E L +LGG N + S L +T+ GI ++ R + FG N Y + P+K
Sbjct: 88 LNDLVKNKNQEKLESLGGPNGLVSALKSNTRLGINEEGDEIQRRRSTFGSNTYTRQPSKG 147
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGXXXXXXXXXXXXXXXXNF 121
FV EAFKD TI+ILL CA LSLGFGIK+ GLKEGW+DGG NF
Sbjct: 148 LFHFVVEAFKDLTILILLGCATLSLGFGIKEHGLKEGWYDGGSIFVAVFLVVAVSAVSNF 207
Query: 122 KQSRQFQALANESSDIXXXXXXXXXXXXLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
+Q+RQF L+ SS+I +SIFD+VVG++VCL GDQ+PADG+F+ GH L
Sbjct: 208 RQNRQFDKLSKVSSNIKIDVVRNGRRQEISIFDIVVGDIVCLNIGDQVPADGVFVEGHLL 267
Query: 182 KVDESSMTGESDRVEVD-EKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELN 240
VDESSMTGESD VEV N FL SGTK+ G+G M VTSVGM+TAWG+MMS IS + N
Sbjct: 268 HVDESSMTGESDHVEVSLTGNTFLFSGTKIADGFGKMAVTSVGMNTAWGQMMSHISRDTN 327
Query: 241 EETPLQARLNKLTSWIGKIGXXXXXXXXXXXXIRYFTGNTRDGMGKREFVGGKTKFDDVM 300
E+TPLQ+RL+KLTS IGK+G IRYFTG T+D G RE+ G TK D+++
Sbjct: 328 EQTPLQSRLDKLTSSIGKVGLLVAFLVLLVLLIRYFTGTTKDESGNREYNGKTTKSDEIV 387
Query: 301 NSXXXXXXXXXXXXXXXXPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTIC 360
N+ PEGLPLAVTLTLA+SMKRMMKD+AMVRKLSACETMGSAT IC
Sbjct: 388 NAVVKMVAAAVTIIVVAIPEGLPLAVTLTLAYSMKRMMKDNAMVRKLSACETMGSATVIC 447
Query: 361 TDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLS 420
TDKTGTLTLNQMKVT+FW G E+ K+ + S Q + EL + V +NTTG+V+ + + +
Sbjct: 448 TDKTGTLTLNQMKVTDFWFGLESGKASSVS----QRVVELFHQGVAMNTTGSVFKAKAGT 503
Query: 421 TSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKR--INEKV 478
E +GSPTEKAILSWA+ +L M +++ + V++VE FNSEKKRSGVLMK+ +N +
Sbjct: 504 EYEFSGSPTEKAILSWAVEELEMGMEKVIEEHDVVHVEGFNSEKKRSGVLMKKKGVNTEN 563
Query: 479 FHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAA 538
HWKGAAE IL MCS + SG +R + +++ Q EKIIQ MAAKSLRCIAFA+++
Sbjct: 564 NVVHWKGAAEKILAMCSTFCDGSGVVREMKEDDKIQFEKIIQSMAAKSLRCIAFAYSEDN 623
Query: 539 EADGQVQXXXXXXXXXXXXXXXXXDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIA 598
E + +++ DPCRPGV+ AVE C+ AGVN+KM+TGDN+ TARAIA
Sbjct: 624 EDNKKLKEEKLSLLGIIGIK----DPCRPGVKKAVEDCQFAGVNIKMITGDNIFTARAIA 679
Query: 599 IECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQK 658
+ECGIL P+ ++N EAV+EG +FR+ + EER+ K+E I+VMARSSP DKLLMV+ LK+
Sbjct: 680 VECGILTPEDEMNS-EAVLEGEKFRNYTQEERLEKVERIKVMARSSPFDKLLMVKCLKEL 738
Query: 659 GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCV 718
GHVVAVTGDGTNDAPAL+ ADIGLSMGIQGTEVAKESSDIVI+DDNF+SV TVL+WGRCV
Sbjct: 739 GHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCV 798
Query: 719 YNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPT 778
YNNIQKF+QFQLTVNVAALVINF AAVS+G VPLTAVQLLWVNLIMDTLGALALATE+PT
Sbjct: 799 YNNIQKFIQFQLTVNVAALVINFVAAVSAGDVPLTAVQLLWVNLIMDTLGALALATEKPT 858
Query: 779 NDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFNT 838
NDLM K P+GR PLIT IMWRNL++QA YQ+++LL LQF+GRSI V E VK+T+IFNT
Sbjct: 859 NDLMKKKPIGRVAPLITNIMWRNLLAQAFYQISVLLVLQFRGRSIFNVTEKVKNTLIFNT 918
Query: 839 FVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERLNWG 898
FVLCQ+FNEFNAR LEKKN+FKG+HKN+LF+ II +T+ LQ+VMVEFLK FADTERLN G
Sbjct: 919 FVLCQVFNEFNARSLEKKNVFKGLHKNRLFIGIIVVTVVLQVVMVEFLKRFADTERLNLG 978
Query: 899 QWAACIGIAAMSWPIGFLIKCIPV 922
QW CI IAA SWPIG+L+K +PV
Sbjct: 979 QWGVCIAIAAASWPIGWLVKSVPV 1002
|
|
| TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2351 (832.7 bits), Expect = 5.5e-244, P = 5.5e-244
Identities = 486/931 (52%), Positives = 629/931 (67%)
Query: 5 MVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFIS 64
M K+ + +L GG +A++L + + GI G + DL R ++G N Y + K F+
Sbjct: 124 MSKDHNSGALEQYGGTQGLANLLKTNPEKGISGDDDDLLKRKTIYGSNTYPRKKGKGFLR 183
Query: 65 FVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGXXXXXXXXXXXXXXXXNFKQS 124
F+++A D T+IIL+V A+ SL GIK G+KEGW+DGG ++KQS
Sbjct: 184 FLWDACHDLTLIILMVAAVASLALGIKTEGIKEGWYDGGSIAFAVILVIVVTAVSDYKQS 243
Query: 125 RQFQALANESSDIXXXXXXXXXXXXLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVD 184
QFQ L +E +I +SI+D+VVG+V+ L G+Q+PADG+ ++GHSL +D
Sbjct: 244 LQFQNLNDEKRNIHLEVLRGGRRVEISIYDIVVGDVIPLNIGNQVPADGVLISGHSLALD 303
Query: 185 ESSMTGESDRVEVD-EKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEET 243
ESSMTGES V D K+PFL+SG KV G G MLVT VG++T WG +M+SIS + EET
Sbjct: 304 ESSMTGESKIVNKDANKDPFLMSGCKVADGNGSMLVTGVGVNTEWGLLMASISEDNGEET 363
Query: 244 PLQARLNKLTSWIGKIGXXXXXXXXXXXXIRYFTGNTRDGMGKREFVGGKTKFDDVMNSX 303
PLQ RLN + ++IG IG RYFTG+T+D G +FV GKTK V++
Sbjct: 364 PLQVRLNGVATFIGSIGLAVAAAVLVILLTRYFTGHTKDNNGGPQFVKGKTKVGHVIDDV 423
Query: 304 XXXXXXXXXXXXXXXPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDK 363
PEGLPLAVTLTLA+SM++MM D A+VR+LSACETMGSATTIC+DK
Sbjct: 424 VKVLTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDK 483
Query: 364 TGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSE 423
TGTLTLNQM V E + G + K+D + +L + L+ E + NTTG+++ E
Sbjct: 484 TGTLTLNQMTVVESYAGGK--KTD--TEQLPATITSLVVEGISQNTTGSIFVPEGGGDLE 539
Query: 424 ITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHW 483
+GSPTEKAIL W + LGMN + + ++++ FNSEKKR GV +K + +V H HW
Sbjct: 540 YSGSPTEKAILGWG-VKLGMNFETARSQSSILHAFPFNSEKKRGGVAVKTADGEV-HVHW 597
Query: 484 KGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFA-HTKAAEA-- 540
KGA+E++L C Y + G + + ++ + + I +MA ++LRC+A A T AE
Sbjct: 598 KGASEIVLASCRSYIDEDGNVAPMTDDKASFFKNGINDMAGRTLRCVALAFRTYEAEKVP 657
Query: 541 DGQV--QXXXXXXXXXXXXXXXXXDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIA 598
G+ + DPCRPGV+ +V C+NAGV V+MVTGDNV TARAIA
Sbjct: 658 TGEELSKWVLPEDDLILLAIVGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQTARAIA 717
Query: 599 IECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQK 658
+ECGIL+ D DL+ + +IEG FR ++ ER + I VM RSSP DKLL+VQSL+++
Sbjct: 718 LECGILSSDADLS-EPTLIEGKSFREMTDAERDKISDKISVMGRSSPNDKLLLVQSLRRQ 776
Query: 659 GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCV 718
GHVVAVTGDGTNDAPAL ADIGL+MGI GTEVAKESSDI+I+DDNF+SVV V+RWGR V
Sbjct: 777 GHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSV 836
Query: 719 YNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPT 778
Y NIQKF+QFQLTVNVAALVIN AA+SSG VPLTAVQLLWVNLIMDTLGALALATE PT
Sbjct: 837 YANIQKFIQFQLTVNVAALVINVVAAISSGDVPLTAVQLLWVNLIMDTLGALALATEPPT 896
Query: 779 NDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESV-------K 831
+ LM +PPVGR +PLIT IMWRNL+ QAIYQV++LLTL F+G SILG++ V K
Sbjct: 897 DHLMGRPPVGRKEPLITNIMWRNLLIQAIYQVSVLLTLNFRGISILGLEHEVHEHATRVK 956
Query: 832 DTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFAD 891
+T+IFN FVLCQ FNEFNARK ++KNIFKG+ KN+LF+ II IT+ LQ+++VEFL FA
Sbjct: 957 NTIIFNAFVLCQAFNEFNARKPDEKNIFKGVIKNRLFMGIIVITLVLQVIIVEFLGKFAS 1016
Query: 892 TERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922
T +LNW QW C+GI +SWP+ + K IPV
Sbjct: 1017 TTKLNWKQWLICVGIGVISWPLALVGKFIPV 1047
|
|
| TAIR|locus:2123924 ACA10 "autoinhibited Ca(2+)-ATPase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2332 (826.0 bits), Expect = 5.6e-242, P = 5.6e-242
Identities = 484/929 (52%), Positives = 628/929 (67%)
Query: 7 KEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFV 66
++++ +L LGGV ++ +L + + GI G + D+ R + FG N Y + + F FV
Sbjct: 126 RDQNIGALQELGGVRGLSDLLKTNLEKGIHGDDDDILKRKSAFGSNTYPQKKGRSFWRFV 185
Query: 67 FEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGXXXXXXXXXXXXXXXXNFKQSRQ 126
+EA +D T+IIL+V A+ SL GIK G+++GW+DG +++QS Q
Sbjct: 186 WEASQDLTLIILIVAAVASLALGIKTEGIEKGWYDGISIAFAVLLVIVVTATSDYRQSLQ 245
Query: 127 FQALANESSDIXXXXXXXXXXXXLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDES 186
FQ L E +I +SI+D+VVG+V+ L GDQ+PADG+ + GHSL VDES
Sbjct: 246 FQNLNEEKRNIRLEVTRDGRRVEISIYDIVVGDVIPLNIGDQVPADGVLVAGHSLAVDES 305
Query: 187 SMTGESDRVEVDE-KNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPL 245
SMTGES V+ + K+PFL+SG KV G G MLVT VG++T WG +M+S+S + ETPL
Sbjct: 306 SMTGESKIVQKNSTKHPFLMSGCKVADGNGTMLVTGVGVNTEWGLLMASVSEDNGGETPL 365
Query: 246 QARLNKLTSWIGKIGXXXXXXXXXXXXIRYFTGNTRDGMGKREFVGGKTKFDDVMNSXXX 305
Q RLN + ++IG +G +RYFTG+T++ G +F+GGKTKF+ V++
Sbjct: 366 QVRLNGVATFIGIVGLTVAGVVLFVLVVRYFTGHTKNEQGGPQFIGGKTKFEHVLDDLVE 425
Query: 306 XXXXXXXXXXXXXPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTG 365
PEGLPLAVTLTLA+SM++MM D A+VR+LSACETMGSATTIC+DKTG
Sbjct: 426 IFTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTG 485
Query: 366 TLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEIT 425
TLTLN+M V E + G + M S S +L +L E + NTTG+V+ S S +++
Sbjct: 486 TLTLNEMTVVECYAGLQKMDSPDSSSKLPSAFTSILVEGIAHNTTGSVFRSES-GEIQVS 544
Query: 426 GSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKG 485
GSPTE+AIL+WA I LGM+ D K + + FNSEKKR GV +K + V H HWKG
Sbjct: 545 GSPTERAILNWA-IKLGMDFDALKSESSAVQFFPFNSEKKRGGVAVKSPDSSV-HIHWKG 602
Query: 486 AAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEAD---- 541
AAE++L C+HY +S + + ++ ++ I +MAA+SLRC+A A + EAD
Sbjct: 603 AAEIVLGSCTHYMDESESFVDMSEDKMGGLKDAIDDMAARSLRCVAIAF-RTFEADKIPT 661
Query: 542 GQVQXXXXXX---XXXXXXXXXXXDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIA 598
+ Q DPCRPGV+ +V C+ AGV V+MVTGDN+ TA+AIA
Sbjct: 662 DEEQLSRWELPEDDLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMVTGDNIQTAKAIA 721
Query: 599 IECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQK 658
+ECGIL D D ++ +IEG FRS S EER E I VM RSSP DKLL+VQSLK++
Sbjct: 722 LECGILASDSDASEPN-LIEGKVFRSYSEEERDRICEEISVMGRSSPNDKLLLVQSLKRR 780
Query: 659 GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCV 718
GHVVAVTGDGTNDAPAL ADIGL+MGIQGTEVAKE SDI+I+DDNF SVV V+RWGR V
Sbjct: 781 GHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESVVKVVRWGRSV 840
Query: 719 YNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPT 778
Y NIQKF+QFQLTVNVAALVIN AA+S+G+VPLTAVQLLWVNLIMDTLGALALATE PT
Sbjct: 841 YANIQKFIQFQLTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTLGALALATEPPT 900
Query: 779 NDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVK-----ESVKDT 833
+ LM + PVGR +PLIT IMWRNL QA+YQV +LL L F+G SIL +K E VK+T
Sbjct: 901 DHLMDRAPVGRREPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLKSKPNAERVKNT 960
Query: 834 MIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTE 893
+IFN FV+CQ+FNEFNARK ++ NIF+G+ +N LF+ II ITI LQ+V+VEFL TFA T
Sbjct: 961 VIFNAFVICQVFNEFNARKPDEINIFRGVLRNHLFVGIISITIVLQVVIVEFLGTFASTT 1020
Query: 894 RLNWGQWAACIGIAAMSWPIGFLIKCIPV 922
+L+W W CIGI ++SWP+ + K IPV
Sbjct: 1021 KLDWEMWLVCIGIGSISWPLAVIGKLIPV 1049
|
|
| TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2319 (821.4 bits), Expect = 1.3e-240, P = 1.3e-240
Identities = 484/934 (51%), Positives = 611/934 (65%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L M + ++ +L GGV VA L + + GI E ++ R N FG N Y K K
Sbjct: 135 LVSMTRNQNMSNLQQYGGVKGVAEKLKSNMEQGINEDEKEVIDRKNAFGSNTYPKKKGKN 194
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGXXXXXXXXXXXXXXXXNF 121
F F++EA++D T+IIL++ A+ SL GIK GLKEGW DGG ++
Sbjct: 195 FFMFLWEAWQDLTLIILIIAAVTSLALGIKTEGLKEGWLDGGSIAFAVLLVIVVTAVSDY 254
Query: 122 KQSRQFQALANESSDIXXXXXXXXXXXXLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
+QS QFQ L +E +I +SI+DVVVG+V+ L+ GDQ+PADG+ ++GHSL
Sbjct: 255 RQSLQFQNLNDEKRNIQLEVMRGGRTVKISIYDVVVGDVIPLRIGDQVPADGVLISGHSL 314
Query: 182 KVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNE 241
+DESSMTGES V D+K+PFL+SG KV G G MLVT VG++T WG +M+SIS + E
Sbjct: 315 AIDESSMTGESKIVHKDQKSPFLMSGCKVADGVGNMLVTGVGINTEWGLLMASISEDTGE 374
Query: 242 ETPLQARLNKLTSWIGKIGXXXXXXXXXXXXIRYFTGNTRDGMGKREFVGGKTKFDDVMN 301
ETPLQ RLN L ++IG +G +RYFTG T+D G +F+ G T D+++
Sbjct: 375 ETPLQVRLNGLATFIGIVGLSVALVVLVALLVRYFTGTTQDTNGATQFIKGTTSISDIVD 434
Query: 302 SXXXXXXXXXXXXXXXXPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICT 361
PEGLPLAVTLTLA+SM++MM D A+VR+LSACETMGSATTIC+
Sbjct: 435 DCVKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICS 494
Query: 362 DKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLST 421
DKTGTLTLNQM V E + G M L L L+ E V NTTGN+++
Sbjct: 495 DKTGTLTLNQMTVVETYAGGSKMDVADNPSGLHPKLVALISEGVAQNTTGNIFHPKDGGE 554
Query: 422 SEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHT 481
EI+GSPTEKAILSWA LGM D + +I+ FNSEKKR GV + R + +VF
Sbjct: 555 VEISGSPTEKAILSWAY-KLGMKFDTIRSESAIIHAFPFNSEKKRGGVAVLRGDSEVF-I 612
Query: 482 HWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFA-HTKAA-- 538
HWKGAAE++L C+ Y +GT++ ++ ++ I MA SLRC+A A T+
Sbjct: 613 HWKGAAEIVLACCTQYMDSNGTLQSIESQKEF-FRVAIDSMAKNSLRCVAIACRTQELNQ 671
Query: 539 ---EADGQVQXXXXXXXXXXXXXXXXXDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTAR 595
E + + DPCRPGVR AV C +AGV V+MVTGDN+ TA+
Sbjct: 672 VPKEQEDLDKWALPEDELILLAIVGIKDPCRPGVREAVRICTSAGVKVRMVTGDNLQTAK 731
Query: 596 AIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSL 655
AIA+ECGIL+ D + + +IEG FR LS +ER + I VM RSSP DKLL+VQ+L
Sbjct: 732 AIALECGILSSDTEA-VEPTIIEGKVFRELSEKEREQVAKKITVMGRSSPNDKLLLVQAL 790
Query: 656 KQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWG 715
++ G VVAVTGDGTNDAPAL ADIGLSMGI GTEVAKESSDI+I+DDNF+SVV V+RWG
Sbjct: 791 RKNGDVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWG 850
Query: 716 RCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATE 775
R VY NIQKF+QFQLTVNVAAL+IN AA+SSG VPL AVQLLWVNLIMDTLGALALATE
Sbjct: 851 RSVYANIQKFIQFQLTVNVAALIINVVAAMSSGDVPLKAVQLLWVNLIMDTLGALALATE 910
Query: 776 QPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKES------ 829
PT+ LM + PVGR +PLIT IMWRNL+ Q+ YQVA+LL L F G SILG+
Sbjct: 911 PPTDHLMHRTPVGRREPLITNIMWRNLLVQSFYQVAVLLVLNFAGLSILGLNHENHAHAV 970
Query: 830 -VKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKT 888
VK+TMIFN FV+CQIFNEFNARK ++ N+F+G++KN LF+AI+G+T LQ+++V FL
Sbjct: 971 EVKNTMIFNAFVMCQIFNEFNARKPDEMNVFRGVNKNPLFVAIVGVTFILQIIIVTFLGK 1030
Query: 889 FADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922
FA T RL W W A I I +SWP+ + K IPV
Sbjct: 1031 FAHTVRLGWQLWLASIIIGLVSWPLAIVGKLIPV 1064
|
|
| TAIR|locus:2062673 ACA4 ""autoinhibited Ca(2+)-ATPase, isoform 4"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1894 (671.8 bits), Expect = 1.5e-195, P = 1.5e-195
Identities = 405/934 (43%), Positives = 572/934 (61%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L+ MV++ +SL+ GGV ++A + GIR SE + R +FG NRY + PA+
Sbjct: 100 LASMVRKNDTKSLAQKGGVEELAKKVSVSLSEGIRSSEVPI--REKIFGENRYTEKPARS 157
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGXXXXXXXXXXXXXXXXNF 121
F+ FV+EA D T+IIL+VCA++S+G G+ G G +DG ++
Sbjct: 158 FLMFVWEALHDITLIILMVCAVVSIGVGVATEGFPRGMYDGTGILLSILLVVMVTAISDY 217
Query: 122 KQSRQFQALANESSDIXXXXXXXXXXXXLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
KQS QF+ L E I +SI D+VVG+VV L GDQ+PADG+F++G++L
Sbjct: 218 KQSLQFRDLDREKKKIIVQVTRDGSRQEISIHDLVVGDVVHLSIGDQVPADGIFISGYNL 277
Query: 182 KVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNE 241
++DESS++GES+ V+++ PFLLSGTKV G MLVT+VGM T WG++M ++ +
Sbjct: 278 EIDESSLSGESEPSHVNKEKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMETLVDGGED 337
Query: 242 ETPLQARLNKLTSWIGKIGXXXXXXXXXXXXIRYFTGNTRDGMGKREFVGGKTKFDDVMN 301
ETPLQ +LN + + IGKIG IR+ G F + +D +
Sbjct: 338 ETPLQVKLNGVATIIGKIGLSFAVLTFVVLCIRFVLDKATSG----SFTNWSS--EDAL- 390
Query: 302 SXXXXXXXXXXXXXXXXPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICT 361
+ PEGLPLAVTL+LAF+MK++M D A+VR L+ACETMGS+T ICT
Sbjct: 391 TLLDYFAISVTIIVVAVPEGLPLAVTLSLAFAMKKLMSDRALVRHLAACETMGSSTCICT 450
Query: 362 DKTGTLTLNQMKVTEFWLGKEAMK-----SDACSLELAQNLYELLQEAVGLNTTGNVYNS 416
DKTGTLT N M V + W+ + + ++ LEL++ + L + + NT V
Sbjct: 451 DKTGTLTTNHMVVNKVWICDKVQERQEGSKESFELELSEEVQSTLLQGIFQNTGSEVVKD 510
Query: 417 NSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINE 476
+T +I GSPTE+AIL + ++ LG + + ++ ++ +E FNS+KK+ VL+
Sbjct: 511 KDGNT-QILGSPTERAILEFGLL-LGGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGG 568
Query: 477 KVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTK 536
KGA+E++L MC + +G L E T I II+ A+++LR + +
Sbjct: 569 GA-RAFCKGASEIVLKMCENVVDSNGESVPLTEERITSISDIIEGFASEALRTLCLVYKD 627
Query: 537 AAEA-DGQVQXXXXXXXXXXXXXXXXXDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTAR 595
EA G++ DP RPGVR AV++C+ AG+ V+MVTGDN+ TA+
Sbjct: 628 LDEAPSGELPDGGYTMVAVVGIK----DPVRPGVREAVQTCQAAGITVRMVTGDNISTAK 683
Query: 596 AIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSL 655
AIA ECGI + IEG +FR LS E A I I+VMARS PLDK +V +L
Sbjct: 684 AIAKECGIYT------EGGLAIEGSEFRDLSPHEMRAIIPKIQVMARSLPLDKHTLVSNL 737
Query: 656 KQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWG 715
++ G VVAVTGDGTNDAPAL ADIGL+MGI GTEVAKE++D++IMDDNF ++V V RWG
Sbjct: 738 RKIGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFKTIVNVARWG 797
Query: 716 RCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATE 775
R VY NIQKF+QFQLTVNV AL+INF +A +G PLTAVQLLWVN+IMDTLGALALATE
Sbjct: 798 RAVYINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATE 857
Query: 776 QPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGV----KESVK 831
P LM + P+ R+ ITK MWRN+ Q++YQ+ +L L F G+S+L + +V
Sbjct: 858 PPNEGLMKRAPIARTASFITKTMWRNIAGQSVYQLIVLGILNFAGKSLLKLDGPDSTAVL 917
Query: 832 DTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFAD 891
+T+IFN+FV CQ+FNE N+R++EK N+FKG+ + +F ++ +T+ Q+++VEFL FA
Sbjct: 918 NTVIFNSFVFCQVFNEINSREIEKINVFKGMFNSWVFTWVMTVTVVFQVIIVEFLGAFAS 977
Query: 892 TERLNWGQWAACIGIAAMSWPIGFLIKCIPVSGK 925
T L+W W I I +++ + ++KC+PV +
Sbjct: 978 TVPLSWQHWLLSILIGSLNMIVAVILKCVPVESR 1011
|
|
| TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1852 (657.0 bits), Expect = 4.1e-191, P = 4.1e-191
Identities = 409/933 (43%), Positives = 574/933 (61%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L +V+ + L GG + L GI SE L R ++G N++ + P++
Sbjct: 103 LGSIVEGHDLKKLKIHGGTEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRG 162
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGXXXXXXXXXXXXXXXXNF 121
F FV+EA +DTT++IL CA +SL GI G G DG ++
Sbjct: 163 FWLFVWEALQDTTLMILAACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDY 222
Query: 122 KQSRQFQALANESSDIXXXXXXXXXXXXLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
+QS QF+ L E I +SI+D++ G+VV L GDQIPADGLF++G S+
Sbjct: 223 RQSLQFKDLDAEKKKIVVQVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSV 282
Query: 182 KVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNE 241
++ESS+TGES+ V V ++PFLLSGTKV G MLVT+VGM T WG++M+++S ++
Sbjct: 283 LINESSLTGESEPVSVSVEHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDD 342
Query: 242 ETPLQARLNKLTSWIGKIGXXXXXXXXXXXXIRYFTGNTRDGMGKREFVGGKTKFDDVMN 301
ETPLQ +LN + + IGKIG ++ R + ++ D++M
Sbjct: 343 ETPLQVKLNGVATIIGKIGLFFAVITFAVL-VQGLANQKR--LDNSHWIWTA---DELM- 395
Query: 302 SXXXXXXXXXXXXXXXXPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICT 361
+ PEGLPLAVTL+LAF+MK+MM D A+VR L+ACETMGSATTIC+
Sbjct: 396 AMLEYFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICS 455
Query: 362 DKTGTLTLNQMKVTEFWL---GKEAMKSDACSLELAQNLYE----LLQEAVGLNTTGNVY 414
DKTGTLT N M V + + KE DA +++ A + E LL +++ NT G +
Sbjct: 456 DKTGTLTTNHMTVVKACICEQAKEVNGPDA-AMKFASGIPESAVKLLLQSIFTNTGGEIV 514
Query: 415 NSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRI 474
T EI G+PTE A+L + + LG + E +Q V+ VE FNS KKR GV+++ +
Sbjct: 515 VGKGNKT-EILGTPTETALLEFGL-SLGGDFQEVRQASNVVKVEPFNSTKKRMGVVIE-L 571
Query: 475 NEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAH 534
E+ F H KGA+E++L C Y K G + LD + + ++ II+E A+++LR + A+
Sbjct: 572 PERHFRAHCKGASEIVLDSCDKYINKDGEVVPLDEKSTSHLKNIIEEFASEALRTLCLAY 631
Query: 535 TKAAEADGQVQXXXXXXXXXXXXXXXXXDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTA 594
+ + + ++ DP RPGV+ +V C++AG+ V+MVTGDN+ TA
Sbjct: 632 FEIGD-EFSLEAPIPSGGYTCIGIVGIKDPVRPGVKESVAICKSAGITVRMVTGDNLTTA 690
Query: 595 RAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQS 654
+AIA ECGIL D IEG +FR S EE + I ++VMARSSP+DK +V+
Sbjct: 691 KAIARECGILTDD------GIAIEGPEFREKSDEELLKLIPKLQVMARSSPMDKHTLVRL 744
Query: 655 LKQK-GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713
L+ VVAVTGDGTNDAPAL ADIGL+MGI GTEVAKES+D++I+DDNFS++VTV +
Sbjct: 745 LRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGTEVAKESADVIILDDNFSTIVTVAK 804
Query: 714 WGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALA 773
WGR VY NIQKF+QFQLTVNV AL++NF +A +G PLTAVQLLWVN+IMDTLGALALA
Sbjct: 805 WGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGNAPLTAVQLLWVNMIMDTLGALALA 864
Query: 774 TEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKD- 832
TE P +DLM + PVGR I+ +MWRN++ Q++YQ+ I+ LQ KG+++ G+ D
Sbjct: 865 TEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQLVIIWCLQTKGKTMFGLDGPDSDL 924
Query: 833 ---TMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTF 889
T+IFN FV CQ+FNE ++R++EK ++FKGI KN +F+A++ T+ Q++++E L TF
Sbjct: 925 TLNTLIFNIFVFCQVFNEISSREMEKIDVFKGILKNYVFVAVLTCTVVFQVIIIELLGTF 984
Query: 890 ADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922
ADT LN GQW I + + P+ +K IPV
Sbjct: 985 ADTTPLNLGQWLVSIILGFLGMPVAAALKMIPV 1017
|
|
| TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1817 (644.7 bits), Expect = 2.1e-187, P = 2.1e-187
Identities = 415/931 (44%), Positives = 551/931 (59%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILD-CDTKGGIRGSEADLGHRINVFGRNRYKKPPAK 60
L +V+ + L GGV+ ++ L C G G L R +FG N++ + +
Sbjct: 101 LGSIVEGHDVKKLKFHGGVDGLSGKLKACPNAGLSTGEPEQLSKRQELFGINKFAESELR 160
Query: 61 RFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGXXXXXXXXXXXXXXXXN 120
F FV+EA +D T++IL VCA +SL GI G +G DG +
Sbjct: 161 SFWVFVWEALQDMTLMILGVCAFVSLIVGIATEGWPQGSHDGLGIVASILLVVFVTATSD 220
Query: 121 FKQSRQFQALANESSDIXXXXXXXXXXXXLSIFDVVVGEVVCLKTGDQIPADGLFLNGHS 180
++QS QF+ L E I +SI+D++ G+VV L GDQ+PADGLFL+G S
Sbjct: 221 YRQSLQFRDLDKEKKKITVQVTRNGFRQKMSIYDLLPGDVVHLAIGDQVPADGLFLSGFS 280
Query: 181 LKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELN 240
+ +DESS+TGES+ V V +NPFLLSGTKV G MLVT+VGM T WG++M+++S +
Sbjct: 281 VVIDESSLTGESEPVMVTAQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGD 340
Query: 241 EETPLQARLNKLTSWIGKIGXXXXXXXXXXXXIRYFTGNTRDGMGKREFVGGKTKFDDVM 300
+ETPLQ +LN + + IGKIG F +G + G DD +
Sbjct: 341 DETPLQVKLNGVATIIGKIGLSFAIVTFAVLVQGMFMRKL--SLGPHWWWSG----DDAL 394
Query: 301 NSXXXXXXXXXXXXXXXXPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTIC 360
PEGLPLAVTL+LAF+MK+MM D A+VR L+ACETMGSATTIC
Sbjct: 395 E-LLEYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTIC 453
Query: 361 TDKTGTLTLNQMKVTEFWLGKE----AMKSDACSLELAQNLYELLQEAVGLNTTGNVYNS 416
+DKTGTLT N M V + + A KS + ++ + +LL + + NT G V
Sbjct: 454 SDKTGTLTTNHMTVVKSCICMNVQDVASKSSSLQSDIPEAALKLLLQLIFNNTGGEVV-V 512
Query: 417 NSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINE 476
N +EI G+PTE AIL + LG E +Q VI VE FNS KKR GV+++
Sbjct: 513 NERGKTEILGTPTETAILELGL-SLGGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEG 571
Query: 477 KVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTK 536
H KGA+E++L C SG + LD E + I E A ++LR + A+
Sbjct: 572 GRIRAHTKGASEIVLAACDKVINSSGEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMD 631
Query: 537 AAEADGQVQXXXXXXXXXXXXXXXXXDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARA 596
E+ DP RPGVR +VE CR AG+ V+MVTGDN++TA+A
Sbjct: 632 I-ESGFSADEGIPEKGFTCIGIVGIKDPVRPGVRESVELCRRAGIMVRMVTGDNINTAKA 690
Query: 597 IAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLK 656
IA ECGIL D IEG FR + EE + I I+VMARSSP+DK +V+ L+
Sbjct: 691 IARECGILTDD------GIAIEGPVFREKNQEEMLELIPKIQVMARSSPMDKHTLVKQLR 744
Query: 657 QK-GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWG 715
VVAVTGDGTNDAPAL ADIGL+MGI GTEVAKE +D++I+DDNFS++VTV +WG
Sbjct: 745 TTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKEIADVIILDDNFSTIVTVAKWG 804
Query: 716 RCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATE 775
R VY NIQKF+QFQLTVNV AL++NF +A +G PLTAVQLLWVN+IMDTLGALALATE
Sbjct: 805 RSVYINIQKFVQFQLTVNVVALIVNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATE 864
Query: 776 QPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKES----VK 831
P N+LM + PVGR IT MWRN++ QA+YQ I+ LQ KG+S+ G+ S V
Sbjct: 865 PPNNELMKRMPVGRRGNFITNAMWRNILGQAVYQFIIIWILQAKGKSMFGLVGSDSTLVL 924
Query: 832 DTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFAD 891
+T+IFN FV CQ+FNE ++R++E+ ++FKGI N +F+ +IG T+ Q++++EFL TFA
Sbjct: 925 NTLIFNCFVFCQVFNEVSSREMEEIDVFKGILDNYVFVVVIGATVFFQIIIIEFLGTFAS 984
Query: 892 TERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922
T L QW I + + PI +K IPV
Sbjct: 985 TTPLTIVQWFFSIFVGFLGMPIAAGLKKIPV 1015
|
|
| TAIR|locus:2120096 ACA2 "calcium ATPase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1805 (640.5 bits), Expect = 3.9e-186, P = 3.9e-186
Identities = 406/930 (43%), Positives = 553/930 (59%)
Query: 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKR 61
L +V+ + L GGV+ +A L G+ A L R +FG N++ + +
Sbjct: 101 LGSIVESHDVKKLKFHGGVDGLAGKLKASPTDGLSTEAAQLSQRQELFGINKFAESEMRG 160
Query: 62 FISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGXXXXXXXXXXXXXXXXNF 121
F FV+EA +D T++IL VCA +SL GI G +G DG ++
Sbjct: 161 FWVFVWEALQDMTLMILGVCAFVSLIVGIATEGWPKGSHDGLGIAASILLVVFVTATSDY 220
Query: 122 KQSRQFQALANESSDIXXXXXXXXXXXXLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSL 181
+QS QF+ L E I LSI+D++ G++V L GDQ+PADGLFL+G S+
Sbjct: 221 RQSLQFRDLDKEKKKITVQVTRNGFRQKLSIYDLLPGDIVHLAIGDQVPADGLFLSGFSV 280
Query: 182 KVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNE 241
+DESS+TGES+ V V+ +NPFL+SGTKV G M++T+VGM T WG++M++++ ++
Sbjct: 281 VIDESSLTGESEPVMVNAQNPFLMSGTKVQDGSCKMMITTVGMRTQWGKLMATLTEGGDD 340
Query: 242 ETPLQARLNKLTSWIGKIGXXXXXXXXXXXXIRYFTGNTRDGMGKREFVGGKTKFDDVMN 301
ETPLQ +LN + + IGKIG F G +V D+ +
Sbjct: 341 ETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGMFMRKLSTGT---HWVWSG---DEALE 394
Query: 302 SXXXXXXXXXXXXXXXXPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICT 361
PEGLPLAVTL+LAF+MK+MM D A+VR L+ACETMGSATTIC+
Sbjct: 395 -LLEYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICS 453
Query: 362 DKTGTLTLNQMKVTEFWLGKE----AMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSN 417
DKTGTLT N M V + + A K + E+ ++ +LL +++ NT G V N
Sbjct: 454 DKTGTLTTNHMTVVKSCICMNVQDVANKGSSLQSEIPESAVKLLIQSIFNNTGGEVV-VN 512
Query: 418 SLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEK 477
+E+ G+PTE AIL + LG E ++ VI VE FNS KKR GV+++
Sbjct: 513 KHGKTELLGTPTETAILELGL-SLGGKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEGG 571
Query: 478 VFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKA 537
H KGA+E++L C SG + LD E + I E A ++LR + A+
Sbjct: 572 RMRAHTKGASEIVLAACDKVVNSSGEVVPLDEESIKYLNVTINEFANEALRTLCLAYMDI 631
Query: 538 AEADGQVQXXXXXXXXXXXXXXXXXDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAI 597
E DP RPGV+ +VE CR AG+ V+MVTGDN++TA+AI
Sbjct: 632 -EGGFSPDDAIPASGFTCVGIVGIKDPVRPGVKESVELCRRAGITVRMVTGDNINTAKAI 690
Query: 598 AIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQ 657
A ECGIL D IEG FR + EE + I I+VMARSSP+DK +V+ L+
Sbjct: 691 ARECGILTDD------GIAIEGPVFREKNQEELLELIPKIQVMARSSPMDKHTLVKQLRT 744
Query: 658 K-GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGR 716
VVAVTGDGTNDAPAL ADIGL+MGI GTEVAKES+D++I+DDNFS++VTV +WGR
Sbjct: 745 TFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGR 804
Query: 717 CVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQ 776
VY NIQKF+QFQLTVNV ALV+NF +A +G PLTAVQLLWVN+IMDTLGALALATE
Sbjct: 805 SVYINIQKFVQFQLTVNVVALVVNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATEP 864
Query: 777 PTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVK--ES--VKD 832
P ++LM + PVGR IT MWRN++ QA+YQ ++ LQ KG+++ G+ +S + +
Sbjct: 865 PNDELMKRLPVGRRGNFITNAMWRNILGQAVYQFIVIWILQAKGKAMFGLDGPDSTLMLN 924
Query: 833 TMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADT 892
T+IFN FV CQ+FNE ++R++E+ ++FKGI N +F+ +IG T+ Q++++EFL TFA T
Sbjct: 925 TLIFNCFVFCQVFNEISSREMEEIDVFKGILDNYVFVVVIGATVFFQIIIIEFLGTFAST 984
Query: 893 ERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922
L QW I I + PI +K IPV
Sbjct: 985 TPLTITQWIFSIFIGFLGMPIAAGLKTIPV 1014
|
|
| DICTYBASE|DDB_G0289473 DDB_G0289473 "Ca2+-ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1013 (361.7 bits), Expect = 4.6e-163, Sum P(2) = 4.6e-163
Identities = 228/561 (40%), Positives = 336/561 (59%)
Query: 389 CSLELAQN--LYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSW--AMIDLGMN 444
C +E+ N + LL E + LN+T + I GS TE A+L W M +
Sbjct: 441 CEMEMLSNSRILTLLAEGISLNSTAYIEKHTDRLNDHI-GSKTECALLEWLETMPNQSYE 499
Query: 445 VDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKV---FHTHWKGAAEMILVMCSHYYVKS 501
+ V+ V F+SEKK S VLM + N+ + + KGAAE++L C++ K+
Sbjct: 500 TVRKENKDRVVKVYPFSSEKKMSAVLMNQ-NQNISGGLIIYVKGAAEIVLNNCTNIVDKN 558
Query: 502 GTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAA-EADGQVQXXXXXXXXXXXXXXX 560
G + +E+ ++K I+ A++ LR + A+ + E + +
Sbjct: 559 GESTQMSRDEKMLLQKDIEIFASEGLRTLVLAYKEINNEPSSEDEAKVIYTGLTFLGLVG 618
Query: 561 XXDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAV-IEG 619
DP R V AV+ C+ AG+ V+M+TGDN+ TA+ IA ECGIL KD V IEG
Sbjct: 619 IKDPVRKEVPRAVKRCQGAGIFVRMLTGDNILTAKNIARECGIL-------KDGGVAIEG 671
Query: 620 VQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAAD 679
QFR L+ ++ I ++V+AR SP DK +V L++ G VVAVTGDG NDAP L+ AD
Sbjct: 672 PQFRLLTDDQLDTIIPHLQVIARCSPTDKFRLVHRLRELGEVVAVTGDGVNDAPQLKEAD 731
Query: 680 IGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVI 739
+G SMGI GTEVAKE+SDIV++DDNF+S+ + WGR VY++I+KF+QFQLTVN+ A++I
Sbjct: 732 VGFSMGIAGTEVAKEASDIVLLDDNFNSIAKAVIWGRNVYDSIRKFIQFQLTVNIVAVLI 791
Query: 740 NFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMW 799
F ++++G+ PL VQLLWVNLIMDTLGALAL+TE P+ +L ++ P GR LIT MW
Sbjct: 792 AFVGSITNGESPLRPVQLLWVNLIMDTLGALALSTEPPSEELFNRRPYGRFDSLITYRMW 851
Query: 800 RNLISQAIYQVAILLTLQFKGRSILGV------------KESVKDTMIFNTFVLCQIFNE 847
RN+I Q+IYQ+A L ++ + S++ + ++V T+IFNTFV CQ FNE
Sbjct: 852 RNIIGQSIYQIAFLFSIMYSAASMVELFDLPRVDQWTTNDKTVYHTIIFNTFVFCQFFNE 911
Query: 848 FNARKLEKK-NIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERLNWGQWAACI-- 904
N R L+ + N+F+ IHK+ +F+ ++ I +Q+++VEF F T L++ QW CI
Sbjct: 912 INCRVLDNQLNVFRNIHKSYVFVGVVSFCIFIQVILVEFGGEFFGTRHLDYKQWFFCIII 971
Query: 905 GIAAMSWPIGFLIKCIPVSGK 925
G ++ W GF ++ +P+ +
Sbjct: 972 GFGSLIW--GFCLRLLPLKDR 990
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P63688 | CTPF_MYCBO | 3, ., 6, ., 3, ., - | 0.3079 | 0.8884 | 0.9237 | yes | no |
| O34431 | ATCL_BACSU | 3, ., 6, ., 3, ., 8 | 0.3135 | 0.8671 | 0.9168 | yes | no |
| P13586 | ATC1_YEAST | 3, ., 6, ., 3, ., 8 | 0.3156 | 0.8682 | 0.86 | yes | no |
| Q8Y8Q5 | LMCA1_LISMO | 3, ., 6, ., 3, ., 8 | 0.3092 | 0.8405 | 0.8988 | yes | no |
| Q9LY77 | ACA12_ARATH | 3, ., 6, ., 3, ., 8 | 0.6605 | 0.9766 | 0.8896 | yes | no |
| P63687 | CTPF_MYCTU | 3, ., 6, ., 3, ., - | 0.3079 | 0.8884 | 0.9237 | yes | no |
| P37278 | ATCL_SYNE7 | 3, ., 6, ., 3, ., 8 | 0.3201 | 0.8682 | 0.8822 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 941 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-140 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-128 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-111 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 2e-93 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 8e-93 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 8e-66 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 5e-62 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 8e-60 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 1e-56 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 2e-49 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-43 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-41 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 4e-35 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 2e-30 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 2e-29 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-28 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 5e-26 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 1e-24 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-22 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 2e-20 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 7e-20 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 3e-19 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 4e-19 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-18 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 1e-17 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 3e-17 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 6e-17 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 6e-14 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 1e-11 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 3e-10 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 1e-09 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 9e-08 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-06 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 3e-05 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 5e-05 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 4e-04 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 4e-04 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 6e-04 | |
| pfam12710 | 122 | pfam12710, HAD, haloacid dehalogenase-like hydrola | 0.002 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 941 bits (2433), Expect = 0.0
Identities = 404/941 (42%), Positives = 590/941 (62%), Gaps = 38/941 (4%)
Query: 1 MLSKMVKEKS--FESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPP 58
+L+ + LGG +A+ L D G+R S + L R V+G+N + P
Sbjct: 24 ILTDLTDIFKRAMPLYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKP 83
Query: 59 AKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGL-----KEGWFDGGSIIFAVFLVV 113
K F+ V+ A D T+I+L V A++SL G+ + G + GW +G +I+ +V LVV
Sbjct: 84 PKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVV 143
Query: 114 SVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADG 173
V+AV+++K+ QF+ L E S ++ V+R G+ + +SI D+VVG++V L TGD +PADG
Sbjct: 144 LVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 203
Query: 174 LFLNGHSLKVDESSMTGESDRVEVD-EKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMM 232
+F++G SL++DESS+TGESD ++ ++PFLLSGT V G G MLVT+VG+++ G++M
Sbjct: 204 VFISGLSLEIDESSITGESDPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLM 263
Query: 233 SSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGG 292
+ + TPLQ +L++L IGK G+ AVL+ V+ +RY R G
Sbjct: 264 MELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVF---------RIIRGD 314
Query: 293 KTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACET 352
++ + ++ AVTI+VVA+PEGLPLAVT+ LA+SMK+MMKD+ +VR L+ACET
Sbjct: 315 GRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACET 374
Query: 353 MGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGN 412
MGSAT IC+DKTGTLT N M V + ++G++ + +++ +L E + LN++
Sbjct: 375 MGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSE 434
Query: 413 VYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMK 472
+ GS TE A+L + + L + E + V+ + FNSE+K V++K
Sbjct: 435 E-VVDRGGKRAFIGSKTECALLDFGL-LLLRDYQEVRAEEKVVKIYPFNSERKFMSVVVK 492
Query: 473 RINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAF 532
+ + KGA+E++L C +G + +++ + +I+ +A+ +LR I
Sbjct: 493 H-SGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTICL 551
Query: 533 AHTKAAEADGQVQEK-LEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNV 591
A+ A + K GLTL+G+VG+KDP RPGVR AV+ C+ AG+ V+MVTGDN+
Sbjct: 552 AYRDFAP--EEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNI 609
Query: 592 HTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLM 651
TA+AIA CGIL +EG +FRSL EE + +RV+ARSSPLDK L+
Sbjct: 610 DTAKAIARNCGILTFG------GLAMEGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLL 663
Query: 652 VQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTV 711
V LK G VVAVTGDGTNDAPAL+ AD+G SMGI GTEVAKE+SDI+++DDNF+S+V
Sbjct: 664 VLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRA 723
Query: 712 LRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALA 771
++WGR VY+NI+KFLQFQLTVNV A+++ F + S PLTAVQLLWVNLIMDTL ALA
Sbjct: 724 VKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALA 783
Query: 772 LATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVK---- 827
LATE PT L+ + P+GR+ PLI++ MW+N++ QA YQ+ + L F G SI V
Sbjct: 784 LATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDE 843
Query: 828 -----ESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVM 882
+ +T++FNTFVL Q+FNE NARKL ++N+F+G+ KN++F+ I+G T Q+++
Sbjct: 844 ITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVII 903
Query: 883 VEFLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPVS 923
VEF +F T L+ QW C+ + +S G L++ IPV
Sbjct: 904 VEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPVE 944
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 645 bits (1665), Expect = 0.0
Identities = 296/934 (31%), Positives = 460/934 (49%), Gaps = 75/934 (8%)
Query: 21 NQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLV 80
N++ L G+ E R+ +G N + + + FKD II+LLV
Sbjct: 31 NELLLELFTSPTTGLSEEEVK--RRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLV 88
Query: 81 CALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVE 140
ALLS G + I+ V + + V ++ + +AL SS +
Sbjct: 89 AALLSAFVGDWVDAGVDAI----VILLVVVINALLGFVQEYRAEKALEALKKMSSPK-AK 143
Query: 141 VVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVE---- 196
V+RDG+ + ++V G++V L+ GD +PAD L L+VDES++TGES VE
Sbjct: 144 VLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQAL 203
Query: 197 ----------VDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQ 246
+D N L SGT V +G +V + G T +G++ + + +TPLQ
Sbjct: 204 PLTKSDAPLGLDRDN-MLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQ 262
Query: 247 ARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINI 306
+LNKL ++ + L VL V ++ F G N ++
Sbjct: 263 RKLNKLGKFLLVLAL---VLGALVFVVGLFRGG---------------------NGLLES 298
Query: 307 IAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGT 366
A+ + V A+PEGLP VT+ LA +RM KD+A+VR L+A ET+GS IC+DKTGT
Sbjct: 299 FLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGT 358
Query: 367 LTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITG 426
LT N+M V + ++ D L+ + L L A L + + G
Sbjct: 359 LTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLL-AAALCNSVTPEKNGW----YQAG 413
Query: 427 SPTEKAILSWAM-IDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKG 485
PTE A++ +A + +++ + ++ F+SE+KR V++K +E + KG
Sbjct: 414 DPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKT-DEGKYILFVKG 472
Query: 486 AAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQ 545
A E+IL C G + L E +E+ ++E+A++ LR +A A+ K A+ +
Sbjct: 473 APEVILERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDE 528
Query: 546 EKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILN 605
E+ L LGL G++DP R V+ A+E R AG+ V M+TGD+V TA AIA ECGI
Sbjct: 529 VDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEA 588
Query: 606 PDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVT 665
+ VI+G + +LS EE +E + V AR SP K +V++L++ GHVVA+T
Sbjct: 589 ---EAESAL-VIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMT 644
Query: 666 GDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKF 725
GDG NDAPAL+AAD+G++MG +GT+ AKE++DIV++DDNF+++V + GR VY NI+KF
Sbjct: 645 GDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKF 704
Query: 726 LQFQLTVNVAA-LVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSK 784
+ + L+ NV L + + + +PLT +QLLW+NL+ D+L ALAL E P +D+M +
Sbjct: 705 ILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKR 764
Query: 785 PPVGRSKPLITKIMWRNLISQAIYQVAILLTLQF--------KGRSILGVKESVKDTMIF 836
PP G + L + ++ I AIL L F L + +++ T F
Sbjct: 765 PPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAF 824
Query: 837 NTFVLCQIFNEFNARKLEKKNIFK-GIHKNKLFLAIIGITIALQLVMVEFLKTFAD---T 892
VL Q+ R + + NK + + I LQL+++
Sbjct: 825 TVLVLIQLLLTLAVR-SRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQP 883
Query: 893 ERLNWGQWAACIGIAAMSWPIGFLIKCIPVSGKQ 926
L+ +W I +A + I S K
Sbjct: 884 TPLSLFEWLIAIAVALLLLYIVVSELYKLKSRKL 917
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 441 bits (1135), Expect = e-140
Identities = 278/906 (30%), Positives = 450/906 (49%), Gaps = 90/906 (9%)
Query: 20 VNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAF-KDTTIIIL 78
V + S L D + G+ S+ + HR G N + + F K+ I++L
Sbjct: 9 VEETCSKLQTDLQNGLNSSQ-EASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLL 67
Query: 79 LVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIR 138
+ A++S+ G D SI A+ +VV+V V ++ + +AL N+
Sbjct: 68 IASAVISVFMG--------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEAL-NKLVPPE 118
Query: 139 VEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVD 198
++R+G+ + +V G++VCL GD++PAD + L +DES++TGE+ V
Sbjct: 119 CHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKV 178
Query: 199 ----EKNPFL---------LSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPL 245
GT V G+G +V G +T +G + + +TPL
Sbjct: 179 TAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPL 238
Query: 246 QARLNKLTSWIGKIGLTVAVLVLAV-MLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVI 304
Q ++ L GK V+ V+ V L+ +F G +
Sbjct: 239 QKSMDLL----GKQLSLVSFGVIGVICLVGWFQGK----------------------DWL 272
Query: 305 NIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKT 364
+ +V++ V AIPEGLP+ VT+TLA + RM K A+VRKL + ET+GS IC+DKT
Sbjct: 273 EMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKT 332
Query: 365 GTLTLNQMKVTEFW-LGKEAMKSDACSLE-------LAQNLYELLQEAVG-LNTTGNVYN 415
GTLT N M VT+ W +A SL L+ AV + GN+ N
Sbjct: 333 GTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCN 392
Query: 416 SNSLSTSE--ITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKR 473
+ + G+PT+ A++ M +D+ ++ + F+SE+K V
Sbjct: 393 NAKFRNEADTLLGNPTDVALIELLM---KFGLDDLRETYIRVAEVPFSSERKWMAVKCVH 449
Query: 474 INEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFA 533
++ KGA E +L C++Y K G L ++R I++ EMA+ LR IAFA
Sbjct: 450 RQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFA 509
Query: 534 HTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHT 593
E+ LT LGLVG+ DP RPGV+ AV + GV + M+TGD+ T
Sbjct: 510 S------------GPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQET 557
Query: 594 ARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQ 653
A +IA G+ + ++ G + ++ ++ + + V AR+SP K+ +V+
Sbjct: 558 AVSIARRLGMPSKT---SQSV---SGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVK 611
Query: 654 SLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713
+L+++G VVA+TGDG NDAPAL+ ADIG++MG GT+VAKE++D+++ DD+F+++++ +
Sbjct: 612 ALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIE 671
Query: 714 WGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALA 773
G+ ++NNI+ F+ FQL+ +VAAL + A + PL A+Q+LW+N++MD A +L
Sbjct: 672 EGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLG 731
Query: 774 TEQPTNDLMSKPPVGRSKPLITK-IMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKD 832
E D+M KPP R+ ++TK ++ + L+S I V L + + GV +
Sbjct: 732 VEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD--GVITARDT 789
Query: 833 TMIFNTFVLCQIFNEFNARKLEKKNIFK-GIHKNKLFLAIIGITIALQL--VMVEFLKTF 889
TM F FV +FN R + K++F+ G N++F +G +I QL + L++
Sbjct: 790 TMTFTCFVFFDMFNALACRS-QTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSV 848
Query: 890 ADTERL 895
TE L
Sbjct: 849 FQTEAL 854
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 410 bits (1055), Expect = e-128
Identities = 281/939 (29%), Positives = 423/939 (45%), Gaps = 132/939 (14%)
Query: 66 VFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSII-------FAVFLVVSVSAV 118
V E F+D + ILL+ A +S F + WF+ G F + L++ +A+
Sbjct: 1 VLEQFEDLLVRILLLAACVS--FVL-------AWFEEGEETVTAFVEPFVILLILVANAI 51
Query: 119 SNFKQSRQ----FQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGL 174
Q R +AL S+ +V+RDGR + D+V G++V L GD++PAD
Sbjct: 52 VGVWQERNAEKAIEALKEYESE-HAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIR 110
Query: 175 FLNGHSLKVDESSMTGES------------DRVEVDEKNPFLLSGTKVTAGYGFMLVTSV 222
L+ +L+VD+S +TGES +R +K L SGT V AG +V
Sbjct: 111 VLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRT 170
Query: 223 GMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRD 282
GMST G++ + E+TPLQ +L++ + K+ + +LV + + +
Sbjct: 171 GMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPAL-- 228
Query: 283 GMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHA 342
G G I AV + V AIPEGLP +T LA ++M K +A
Sbjct: 229 --GGGWIQG-----------AIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNA 275
Query: 343 MVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLE---------- 392
+VRKL + ET+G T IC+DKTGTLT NQM V + A+ + SL
Sbjct: 276 IVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVV----ALDPSSSSLNEFCVTGTTYA 331
Query: 393 ---------------LAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAI---- 433
L EL A N + ++ + E G TE A+
Sbjct: 332 PEGGVIKDDGPVAGGQDAGLEELATIAALCNDS-SLDFNERKGVYEKVGEATEAALKVLV 390
Query: 434 ----LSWAMIDLGMNVDEPKQYCTVINVEA-------FNSEKKRSGVLMKRINEKVFHTH 482
L + +V N + F+ ++K VL K +
Sbjct: 391 EKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCK---PSTGNKL 447
Query: 483 W-KGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMA-AKSLRCIAFAH----TK 536
+ KGA E +L C+H G L + + I +I+EM K+LRC+A A
Sbjct: 448 FVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDP 507
Query: 537 AAEADGQVQEKLE--ETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTA 594
E E E+ LT +G+VG+ DP RP V A+E CR AG+ V M+TGDN TA
Sbjct: 508 REEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETA 567
Query: 595 RAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQS 654
AI GI +PD D+ G +F + ++ A S + +R P K +V+
Sbjct: 568 EAICRRIGIFSPDEDVTFKS--FTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVEL 625
Query: 655 LKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714
L+++G +VA+TGDG NDAPAL+ ADIG++MG GTEVAKE+SD+V+ DDNF+++V +
Sbjct: 626 LQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEE 684
Query: 715 GRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALAT 774
GR +YNN+++F+++ ++ N+ +V F A L VQLLWVNL+ D L A AL
Sbjct: 685 GRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGF 744
Query: 775 EQPTNDLMSKPPVGRSKPLITK---------------------IMWRNLISQAIYQVAIL 813
P D+M KPP +PLIT + W L
Sbjct: 745 NPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSF 804
Query: 814 LTLQFKGRSILGVKESVK--DTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAI 871
T V E + T+ + V+ ++FN NA ++ + NK +
Sbjct: 805 TTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGA 864
Query: 872 IGITIALQLVM--VEFLKTFADTERLNWGQWAACIGIAA 908
I +++AL ++ V FL L+ W + ++
Sbjct: 865 ICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSL 903
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 352 bits (905), Expect = e-111
Identities = 198/679 (29%), Positives = 317/679 (46%), Gaps = 146/679 (21%)
Query: 104 SIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIR-VEVVRDGRRRGLSIFDVVVGEVVC 162
I+F V + V + K ++L++ + R V+R+G + + D+V G+VV
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGWKE-IPAKDLVPGDVVL 59
Query: 163 LKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEV---------DEKNPFLLSGTKVTAG 213
+K+G+ +PADG+ L+G S VDES++TGES+ V + +GT V G
Sbjct: 60 VKSGETVPADGVLLSG-SCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGG 118
Query: 214 YGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLI 273
++VT G+ T G + + TPLQ++ ++L ++I L + +L LAV L
Sbjct: 119 TLIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFI--LFLLLLALAVFLY 176
Query: 274 RYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFS 333
+ G + + K + A+ ++V+ +P LP AVT+ LA
Sbjct: 177 LFIRGWDPNSIFK-------------------ALLRALIVLVIVVPPALPAAVTVALAVG 217
Query: 334 MKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLEL 393
R+ K +VR L+A E +G +C+DKTGTLT N+M + ++ K D S +
Sbjct: 218 DARLAKKGILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDG--GKEDNSSSLV 275
Query: 394 AQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCT 453
A + L +G P EKA+L A +L D+ +
Sbjct: 276 ACDNNYL------------------------SGDPMEKALLKSA--ELVGKADKGNKEYK 309
Query: 454 VINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERT 513
+++V F+S KR V++ + KGA E IL C++Y
Sbjct: 310 ILDVFPFSSVLKRMSVIV-ETPDGSDLLFVKGAPEFILERCNNY---------------- 352
Query: 514 QIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAV 573
E+ E+A + LR +AFA K E L LGL+ +DP RP + +
Sbjct: 353 --EEKYLELARQGLRVLAFAS------------KELEDDLEFLGLITFEDPLRPDAKETI 398
Query: 574 ESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAK 633
E + AG+ V M+TGDNV TA+AIA E GI
Sbjct: 399 EELKAAGIKVVMITGDNVLTAKAIAKELGID----------------------------- 429
Query: 634 IESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAK 693
V AR SP KL +V++L++KGH+VA+TGDG NDAPAL+ AD+G++MG AK
Sbjct: 430 -----VFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMG------AK 478
Query: 694 ESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLT 753
++DIV++DD+ S++V ++ GR +++NI+ + + + N+ + + V
Sbjct: 479 AAADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIV-------- 530
Query: 754 AVQLLWVNLIMDTLGALAL 772
+ L++ L ALAL
Sbjct: 531 ------IILLLPMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 317 bits (814), Expect = 2e-93
Identities = 236/829 (28%), Positives = 395/829 (47%), Gaps = 103/829 (12%)
Query: 50 GRNRYKKPPAK-RFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDG---GSI 105
G N PP ++ F + F ++++ + L L +GI+ +E D G +
Sbjct: 50 GPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVV 109
Query: 106 IFAVFLVV----------SVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDV 155
+ AV ++ S + +FK QAL V+RDG + ++ V
Sbjct: 110 LSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQAL----------VIRDGEKMSINAEQV 159
Query: 156 VVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESD----RVEVDEKNPF-----LLS 206
VVG++V +K GD+IPAD ++ KVD SS+TGES+ E +NP
Sbjct: 160 VVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFF 219
Query: 207 GTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVL 266
T G +V + G T G + S S N +TP+ + I + + + V
Sbjct: 220 STNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVS 279
Query: 267 VLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAV 326
+ LI +T + +VI +I IIV +PEGL V
Sbjct: 280 FFILSLILGYT---------------------WLEAVIFLIG----IIVANVPEGLLATV 314
Query: 327 TLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKS 386
T+ L + KRM + + +V+ L A ET+GS +TIC+DKTGTLT N+M V W + ++
Sbjct: 315 TVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEA 374
Query: 387 DAC------SLELAQNLYELLQEAVGLNTTGNVYNSN----SLSTSEITGSPTEKAILSW 436
D S + + + L GL V+ + + + G +E A+L
Sbjct: 375 DTTEDQSGVSFDKSSATWLALSRIAGLCNRA-VFKAGQENVPILKRAVAGDASESALLKC 433
Query: 437 AMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRIN--EKVFHTHWKGAAEMILVMC 494
+ LG ++ ++ V+ + FNS K + + + + KGA E IL C
Sbjct: 434 IELCLGSVMEMRERNPKVVEI-PFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERC 492
Query: 495 SHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEAD--GQVQEKLEE-- 550
S + G + LD E + + E+ R + F H + Q ++
Sbjct: 493 SSILIH-GKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVN 551
Query: 551 ---TGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILN-- 605
L +GL+ + DP R V AV CR+AG+ V MVTGD+ TA+AIA GI++
Sbjct: 552 FPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEG 611
Query: 606 -------------PDVDLNKDEA---VIEGVQFRSLSAEE--RIAKIESIRVMARSSPLD 647
P +N +A V+ G + +++E+ I K + V AR+SP
Sbjct: 612 NETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQ 671
Query: 648 KLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSS 707
KL++V+ +++G +VAVTGDG ND+PAL+ ADIG++MGI G++V+K+++D++++DDNF+S
Sbjct: 672 KLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFAS 731
Query: 708 VVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTL 767
+VT + GR +++N++K + + LT N+ + +++ +PL + +L ++L D +
Sbjct: 732 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMV 791
Query: 768 GALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTL 816
A++LA E+ +D+M + P P K++ LIS A Q+ ++ L
Sbjct: 792 PAISLAYEKAESDIMKRQP---RNPKTDKLVNERLISMAYGQIGMIQAL 837
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 316 bits (812), Expect = 8e-93
Identities = 235/884 (26%), Positives = 384/884 (43%), Gaps = 181/884 (20%)
Query: 44 HRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGG 103
HR+ G NR + + + + ++L++ A +S W +GG
Sbjct: 34 HRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAM--------HDWIEGG 85
Query: 104 SIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCL 163
I + L + + + +K + +L N +S + V+R+G+ + D+V G++ L
Sbjct: 86 VISAIIALNILIGFIQEYKAEKTMDSLKNLASPM-AHVIRNGKSDAIDSHDLVPGDICLL 144
Query: 164 KTGDQIPADGLFLNGHSLKVDESSMTGES--------------DRVEVDEKNPFLLSGTK 209
KTGD IPAD + + DE+ +TGES + + ++ S +
Sbjct: 145 KTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSA 204
Query: 210 VTAGYGFMLVTSVGMSTAWGEMMSSISHE------------------------------- 238
VT G + + +++ G + + + +
Sbjct: 205 VTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTG 264
Query: 239 ----LNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKT 294
LN TPL +L+KL + I + A++V+A
Sbjct: 265 AFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMA-----------------------AH 301
Query: 295 KFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMG 354
KFD I I A++II PE L +++T+A M K + +VRKL A E +G
Sbjct: 302 KFDVDKEVAIYAICLAISII----PESLIAVLSITMAMGAANMSKRNVIVRKLDALEALG 357
Query: 355 SATTICTDKTGTLTLNQMKVTEFWLG---------------------------------- 380
+ IC+DKTGT+T +M + W+
Sbjct: 358 AVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSH 417
Query: 381 ------------KEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSP 428
K+ +K ++ +L+ L E L V+ ++ + G P
Sbjct: 418 NEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDP 477
Query: 429 TEKAILSWAM-IDLGMNVDEPKQYCTVINVEA-----------------------FNSEK 464
TE AI +A DL N ++ N F+SE
Sbjct: 478 TEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEI 537
Query: 465 KRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGT-IRILDGEERTQIEKIIQEMA 523
KR + + + + ++ + KGA E I+ CS K G I L+ +R I ++ +A
Sbjct: 538 KRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLA 597
Query: 524 AKSLRCIAFAH---TKAAEADGQVQEK-----LEETGLTLLGLVGLKDPCRPGVRAAVES 575
A+ LR +AFA KA D Q++ + E+ L LGL+G+ DP R AVE
Sbjct: 598 AEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEK 657
Query: 576 CRNAGVNVKMVTGDNVHTARAIAIECGILNP----DVDLNKDEAVIEGVQFRSLSAEERI 631
C AG+NV M+TGD TA+AIA E GI+ P D D D V+ G QF +LS EE
Sbjct: 658 CHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEE-- 715
Query: 632 AKIESIR----VMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQ 687
++ ++ V+AR +P K+ M+++L ++ A+TGDG ND+P+L+ A++G++MGI
Sbjct: 716 --VDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGIN 773
Query: 688 GTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAA---LVIN--FG 742
G++VAK++SDIV+ DDNF+S++ + GR +++NI KF+ L NVA L+I F
Sbjct: 774 GSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFR 833
Query: 743 AAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPP 786
PL+ V++LW +I A+ L E+ DLM + P
Sbjct: 834 DENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLP 877
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 237 bits (606), Expect = 8e-66
Identities = 206/815 (25%), Positives = 353/815 (43%), Gaps = 129/815 (15%)
Query: 40 ADLGHRINVFGRNRY---KKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLK 96
++ R+ FG N+ KK P R + AF + I IL + +S L
Sbjct: 37 VEVTERLAEFGPNQTVEEKKVPNLRLL---IRAFNNPFIYILAMLMGVSY--------LT 85
Query: 97 EGWFDGGSIIFAVFLVVSVSAVSNFKQ----SRQFQALANESSDIRVEVVRDGRRRG--- 149
+ ++I A L+V S + F Q R AL N + V+R G
Sbjct: 86 DDLE--ATVIIA--LMVLASGLLGFIQESRAERAAYALKNMVKN-TATVLRVINENGNGS 140
Query: 150 ---LSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVE-------VDE 199
+ I +V G+++ L GD IPAD ++ L +++S++TGES VE +
Sbjct: 141 MDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARD 200
Query: 200 KNPF-----LLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTS 254
GT V +G+ +V + G ST +G + + + E +T + ++
Sbjct: 201 PEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAAT-ERRGQTAFDKGVKSVSK 259
Query: 255 WIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTII 314
+ + L + +VL + G K D + + A+ +
Sbjct: 260 LLIRFMLVMVPVVL--------------------MINGLMKGDWLEAFLF-----ALAVA 294
Query: 315 VVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKV 374
V PE LP+ V+ LA M K +V++LSA + G+ +CTDKTGTLT +++
Sbjct: 295 VGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKI-E 353
Query: 375 TEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNT---TG--NVYNSNSLSTSEITGSPT 429
E + S+ L++A LN+ TG NV + L+ + + +
Sbjct: 354 LEKHIDSSGETSERV-LKMAW-----------LNSYFQTGWKNVLDHAVLAKLDESAARQ 401
Query: 430 EKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHW---KGA 486
+ W +D + P F+ +++R V++ E KGA
Sbjct: 402 TAS--RWKKVD-----EIP-----------FDFDRRRLSVVV----ENRAEVTRLICKGA 439
Query: 487 AEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQE 546
E +L +C+H G + L E+++++ + EM + +R IA A TK +
Sbjct: 440 VEEMLTVCTHKR-FGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVA-TKTLKVGEADFT 497
Query: 547 KLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNP 606
K +E L + G +G DP + + A+ + G+NVK++TGDN I E GI
Sbjct: 498 KTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN 557
Query: 607 DVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTG 666
D + G LS EE ++ + AR +P+ K ++ LK+ GH V G
Sbjct: 558 DF--------LLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLG 609
Query: 667 DGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFL 726
DG NDAPALR AD+G+S+ ++AKE+SDI++++ + + + GR + NI K+L
Sbjct: 610 DGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYL 668
Query: 727 QFQLTVNVAALVINFGAAVSSGKV---PLTAVQLLWVNLIMDTLGALALATEQPTNDLMS 783
+ + N + F V+S + P+ ++ LL NL+ D L L ++ + +
Sbjct: 669 KMTASSNFGNV---FSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLK 724
Query: 784 KPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQF 818
KP K + ++ +S +I+ +A L + F
Sbjct: 725 KPHQWEQKGMGRFMLCIGPVS-SIFDIATFLLMWF 758
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 224 bits (573), Expect = 5e-62
Identities = 186/763 (24%), Positives = 327/763 (42%), Gaps = 128/763 (16%)
Query: 34 GIRGSEADLGHRINVFGRNRY---KKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGI 90
G+ +EA R+ +G N K P +F+ F F + ++ A++++
Sbjct: 1 GLTSAEAK--KRLAKYGPNELPEKKVSPLLKFLGF----FWNPLSWVMEAAAIIAIAL-- 52
Query: 91 KQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGL 150
E W D I+ + L ++ + K +AL S + V+RDG+ + +
Sbjct: 53 ------ENWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQ-SLAPKARVLRDGKWQEI 105
Query: 151 SIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEK---NPFLLSG 207
++V G+VV LK GD +PAD G ++VD++++TGES + V +K + SG
Sbjct: 106 PASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGES--LPVTKKTGDIAY--SG 161
Query: 208 TKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNK----LTSWIGKIGLTV 263
+ V G +VT+ GM+T +G+ + + LQ L+K L IG + V
Sbjct: 162 STVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIG---VLV 218
Query: 264 AVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLP 323
+ ++ + R S + A+ ++V IP +P
Sbjct: 219 LIELVVLFFGRG-------------------------ESFREGLQFALVLLVGGIPIAMP 253
Query: 324 LAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEA 383
+++T+A + K A+V +L+A E + +C+DKTGTLTLN++ + E
Sbjct: 254 AVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG 313
Query: 384 MKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGM 443
D L A L++ E + A+L A DL
Sbjct: 314 FDKDDVLLYAA------------------------LASREEDQDAIDTAVLGSA-KDLKE 348
Query: 444 NVDEPKQYCTVINVEAFNSEKKRSGV-LMKRINEKVFHTHWKGAAEMILVMCSHYYVKSG 502
D K + F+ KR+ + K F KGA ++IL +C +
Sbjct: 349 ARDGYKV----LEFVPFDPVDKRTEATVEDPETGKRFKVT-KGAPQVILDLCDNKK---- 399
Query: 503 TIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLK 562
E ++E+ + E+A++ R + A T EE LGL+ L
Sbjct: 400 -------EIEEKVEEKVDELASRGYRALGVARTD------------EEGRWHFLGLLPLF 440
Query: 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNV----HTARAIAIECGILNPDVDLNKDEAVIE 618
DP R + +E R+ GV VKMVTGD++ TAR + + I DV L D
Sbjct: 441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDN---- 496
Query: 619 GVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAA 678
R +E A P K +V+ L+++GH+V +TGDG NDAPAL+ A
Sbjct: 497 ----RDDLPSGLGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKA 552
Query: 679 DIGLSMGIQG-TEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAAL 737
D+G++ + G T+ A+ ++DIV+ + S +V + R ++ ++ ++ +++ + +
Sbjct: 553 DVGIA--VAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETI-RI 609
Query: 738 VINFGAAVSSGKVPLTAVQLLWVNLIMD-TLGALALATEQPTN 779
V FG + + ++ + ++ D T+ +A +P+
Sbjct: 610 VFFFGLLILILNFYFPPIMVVIIAILNDGTIMTIAYDNVKPSK 652
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 203 bits (518), Expect = 8e-60
Identities = 77/248 (31%), Positives = 122/248 (49%), Gaps = 27/248 (10%)
Query: 105 IIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLK 164
I+ V + + A ++ + +AL V+RDG+ + ++VVG++V LK
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 165 TGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGM 224
GD++PADG + G SL+VDES++TGES VE + + +GT V +G ++VT+ G
Sbjct: 62 PGDRVPADGRIIEG-SLEVDESALTGESLPVEKSRGD-TVFAGTVVLSGELKVIVTATGE 119
Query: 225 STAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGM 284
T G++ + + +TPLQ L+KL + I L +A+LV + R
Sbjct: 120 DTELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIWFFRG--------- 170
Query: 285 GKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMV 344
+ + A+ ++V A PE LPLAV L LA R+ K +V
Sbjct: 171 ----------------GDFLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILV 214
Query: 345 RKLSACET 352
+ LSA ET
Sbjct: 215 KNLSALET 222
|
Length = 222 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 210 bits (537), Expect = 1e-56
Identities = 196/698 (28%), Positives = 327/698 (46%), Gaps = 124/698 (17%)
Query: 109 VFLVVSVSAVSNFKQ-SRQFQA-------LANESSDIRVEVVR-DGRRRGLSIFDVVVGE 159
+ L+V++S + NF Q +R +A ++N ++ +RV + + + I +V G+
Sbjct: 128 IALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGD 187
Query: 160 VVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVE-------VDEKNPF-----LLSG 207
++ L GD IPAD L L V ++S+TGES VE + NP G
Sbjct: 188 IIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMG 247
Query: 208 TKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLV 267
T V +G +V + G +T +G++ +S + +E Q ++++ SW+ L +LV
Sbjct: 248 TNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRV-SWL----LIRFMLV 302
Query: 268 LAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAI---PEGLPL 324
+A +++ + G TK D AA+ + VA+ PE LP+
Sbjct: 303 MAPVVL---------------LINGYTKGD--------WWEAALFALSVAVGLTPEMLPM 339
Query: 325 AVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKV-----TEFWL 379
VT TLA ++ K +V++L A + G+ +CTDKTGTLT Q K+ T+
Sbjct: 340 IVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLT--QDKIVLENHTDIS- 396
Query: 380 GKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMI 439
GK S+ +L A LN+ N L T+ + G E A
Sbjct: 397 GK---TSE-----------RVLHSAW-LNSHYQTGLKNLLDTAVLEGVDEESAR------ 435
Query: 440 DLGMN---VDE-PKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCS 495
L +DE P F+ E++R V++ N + KGA E IL +CS
Sbjct: 436 SLASRWQKIDEIP-----------FDFERRRMSVVVAE-NTEHHQLICKGALEEILNVCS 483
Query: 496 HYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTL 555
+G I LD +I+++ + + LR +A A TK A ++ +E+ L L
Sbjct: 484 QVRH-NGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVA-TKYLPAREGDYQRADESDLIL 541
Query: 556 LGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEA 615
G + DP + A+++ + +GV VK++TGD+ A + C +V L+ E
Sbjct: 542 EGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKV---CH----EVGLDAGEV 594
Query: 616 VIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPAL 675
+I G +LS +E E + AR +P+ K +V LK++GHVV GDG NDAPAL
Sbjct: 595 LI-GSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPAL 653
Query: 676 RAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVN-- 733
RAADIG+S+ ++A+E++DI++++ + + + GR + N+ K+++ + N
Sbjct: 654 RAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFG 712
Query: 734 ------VAALVINFGAAVSSGKVPLTAVQLLWVNLIMD 765
VA+ + F +P+ + LL NL+ D
Sbjct: 713 NVFSVLVASAFLPF--------LPMLPLHLLIQNLLYD 742
|
Length = 902 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 172 bits (438), Expect = 2e-49
Identities = 62/172 (36%), Positives = 94/172 (54%), Gaps = 3/172 (1%)
Query: 750 VPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQ 809
+PLT +Q+LW+NL+ D L ALAL E P DLM +PP +PL ++ + R ++ Q +
Sbjct: 2 LPLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLLI 61
Query: 810 VAILLTLQFKGRSILGVKESVKD-TMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLF 868
+ L + F G G+ ES TM FNT VL Q+FN NAR L + G+ NKL
Sbjct: 62 AIVTLLVFFLGLLGFGISESGLAQTMAFNTLVLSQLFNALNARSLRRSLFKIGLFSNKLL 121
Query: 869 LAIIGITIALQLVMVE--FLKTFADTERLNWGQWAACIGIAAMSWPIGFLIK 918
L + +++ LQL+++ L+ T L+ QW +G+A + + L K
Sbjct: 122 LLAVLLSLLLQLLIIYVPGLQAVFGTTPLSLEQWLIVLGLALVVLLVVELRK 173
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 170 bits (432), Expect = 2e-43
Identities = 201/799 (25%), Positives = 343/799 (42%), Gaps = 135/799 (16%)
Query: 38 SEADLGHRINVFGRN---RYKKPPAKRFISFVFEAFKDTTIIILLVCALLSL--GFGIKQ 92
+E D R+ +G N K P A + +AF + I +L+V A +S + +
Sbjct: 47 TEEDAAERLQRYGPNEVAHEKPPHA--LVQL-LQAFNNPFIYVLMVLAAISFFTDYWLPL 103
Query: 93 VGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQ----SRQFQALANESSDI-----RVEVVR 143
+E G II + V +S + F Q ++ +AL R
Sbjct: 104 RRGEETDLTGVIIILTM---VLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGA 160
Query: 144 DGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVE------- 196
+ RR + + ++V G++V L GD IPAD + L + ++ +TGE+ VE
Sbjct: 161 EPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGA 220
Query: 197 ----------VDEKNPFLLS-----GTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNE 241
DE + L GT V +G +V + G T +G + SI
Sbjct: 221 VAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVGT-RA 279
Query: 242 ETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMN 301
+T +N ++ + + L V+V V+LI FT D +
Sbjct: 280 QTAFDRGVNSVSWLLIRFML---VMVPVVLLINGFTKG------------------DWLE 318
Query: 302 SVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICT 361
+++ +A AV + PE LP+ V+ LA M + +V++L+A + G+ +CT
Sbjct: 319 ALLFALAVAVGLT----PEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCT 374
Query: 362 DKTGTLTLNQMK-VTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLS 420
DKTGT L Q + + E L K + L+LA NS S
Sbjct: 375 DKTGT--LTQDRIILEHHLDVSGRKDERV-LQLAW------------------LNSFHQS 413
Query: 421 TSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFH 480
+ + ++A++++A + + +P Y V + F+ ++R V+++ + H
Sbjct: 414 GMK---NLMDQAVVAFA--EGNPEIVKPAGYRKVDEL-PFDFVRRRLSVVVEDAQGQ--H 465
Query: 481 TH-WKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAE 539
KGA E +L + +H T+R LD R ++ + + A R + A +
Sbjct: 466 LLICKGAVEEMLAVATHVR-DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPG 524
Query: 540 ADGQVQ-EKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIA 598
+ + Q +E L + G + DP + A+ + R GV VK++TGDN I
Sbjct: 525 GESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKIC 584
Query: 599 IECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQK 658
E G L P L G + ++ ++E V A+ +PL K ++++L+
Sbjct: 585 REVG-LEPGEPLL-------GTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQAN 636
Query: 659 GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNF----SSVVTVLRW 714
GH V GDG NDAPALR AD+G+S+ G ++AKES+DI++++ + V+
Sbjct: 637 GHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIK---- 691
Query: 715 GRCVYNNIQKFLQFQLTVN--------VAALVINFGAAVSSGKVPLTAVQLLWVNLIMDT 766
GR + NI K+L + N VA+ I F +P+ A+ LL NL+ D
Sbjct: 692 GRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPF--------LPMLAIHLLLQNLMYD- 742
Query: 767 LGALALATEQPTNDLMSKP 785
+ L+L ++ + + KP
Sbjct: 743 ISQLSLPWDKMDKEFLRKP 761
|
Length = 903 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 165 bits (419), Expect = 1e-41
Identities = 192/973 (19%), Positives = 358/973 (36%), Gaps = 204/973 (20%)
Query: 37 GSEADLGHRINVFGRNR--YKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVG 94
+ D+ R +G+N P F+ + E + + +L
Sbjct: 140 LTTGDIAQRKAKYGKNEIEIPVPS---FLELLKEEVLHPFYVFQVFSVILW--------L 188
Query: 95 LKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFD 154
L E ++ I+F +S+S KQ ++ + + ++ V V+R+G+ ++ +
Sbjct: 189 LDEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQ--SVIVIRNGKWVTIASDE 246
Query: 155 VVVGEVVCLKTGDQ--IPADGLFLNGHSLKVDESSMTGES---------------DRVEV 197
+V G++V + ++ +P D + L+G S V+ES +TGES + + +
Sbjct: 247 LVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVPVLKFPIPDNGDDDEDLFL 305
Query: 198 DE--KNPFLLSGTKV-----TAGYGFML--VTSVGMSTAWGEMMSSISHELNEETPLQAR 248
E K L GTK+ G L V G ST+ G+++ SI + P +
Sbjct: 306 YETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYP----KPRVFK 361
Query: 249 LNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIA 308
K + +A++ +I +DG + II
Sbjct: 362 FYKDSFKFILFLAVLALIGFIYTIIEL----IKDGRPLGK-----------------IIL 400
Query: 309 AAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLT 368
++ II + +P LP +++ + S+ R+ K G C DKTGTLT
Sbjct: 401 RSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLT 460
Query: 369 LNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLS--TSEITG 426
+ + + G + + + E + + E T + +SL+ ++ G
Sbjct: 461 EDGLDL----RGVQGLSGNQ---EFLKIVTEDSSLKPS-ITHKALATCHSLTKLEGKLVG 512
Query: 427 SPTEKAILS---WAM-----------IDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMK 472
P +K + W + I + D+P Q ++I F+S +R V++
Sbjct: 513 DPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVS 572
Query: 473 RINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAF 532
+E+ KGA E I +CS V S +++++ + R +A
Sbjct: 573 TNDERSPDAFVKGAPETIQSLCSPETVPS------------DYQEVLKSYTREGYRVLAL 620
Query: 533 AHTKAAEADGQVQEKLE----ETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTG 588
A+ + + Q + L E+ LT LG + ++P +P + ++ + A + M+TG
Sbjct: 621 AYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITG 680
Query: 589 DNVHTARAIAIECGILNPDVDLNKDEAVI----EGVQFRSLSAEERIAKIESI------- 637
DN TA +A ECGI+NP L EA + Q + + +
Sbjct: 681 DNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLG 740
Query: 638 ---------------------------------------RVMARSSPLDKLLMVQSLKQK 658
V AR +P K +V+ L++
Sbjct: 741 QDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL 800
Query: 659 GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRC- 717
+ V + GDG ND AL+ AD+G+S+ VA + + S V V+R GRC
Sbjct: 801 DYTVGMCGDGANDCGALKQADVGISLSEAEASVA---APFTSKLASISCVPNVIREGRCA 857
Query: 718 VYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQP 777
+ + Q F L + ++ + S L Q L ++L++ AL ++ +P
Sbjct: 858 LVTSFQMFKYMALYSLIQFYSVSILYLIGSN---LGDGQFLTIDLLLIFPVALLMSRNKP 914
Query: 778 TNDLMSKPPVGR--SKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMI 835
L + P S ++T ++ Q + + Q + +
Sbjct: 915 LKKLSKERPPSNLFSVYILTSVL---------IQFVLHILSQV------YLVFELHAQPW 959
Query: 836 FNTFVLCQIFNEFNARKLEKKNIF---------------KG------IHKNKLFL-AIIG 873
+ + N L +F KG I+KNK F+ +I
Sbjct: 960 Y-KPENPVDLEKENFPNLLNTVLFFVSSFQYLITAIVNSKGPPFREPIYKNKPFVYLLIT 1018
Query: 874 ITIALQLVMVEFL 886
L +++++
Sbjct: 1019 GLGLLLVLLLDPH 1031
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 4e-35
Identities = 73/219 (33%), Positives = 105/219 (47%), Gaps = 47/219 (21%)
Query: 546 EKLEETGLT---------LLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARA 596
E LE G T L+G++ L D RP + A+ + + G+ V M+TGDN TA A
Sbjct: 510 EALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEA 569
Query: 597 IAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLK 656
IA E GI DE V A P DK +V+ L+
Sbjct: 570 IAKELGI---------DE------------------------VRAELLPEDKAEIVRELQ 596
Query: 657 QKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGR 716
+G VA+ GDG NDAPAL AAD+G++MG GT+VA E++D+V+M D+ S+V + R
Sbjct: 597 AEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSR 655
Query: 717 CVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAV 755
I++ L + N A+ + G ++ P A
Sbjct: 656 ATRRIIKQNLFWAFGYNAIAIPLAAGGLLT----PWIAA 690
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 126 bits (320), Expect = 2e-30
Identities = 66/191 (34%), Positives = 101/191 (52%), Gaps = 35/191 (18%)
Query: 554 TLLGLVGLKDPCRPGVRAAVESCRNAGV-NVKMVTGDNVHTARAIAIECGILNPDVDLNK 612
LLG++ L+D RP + A+ + + AG + M+TGDN A A+A E GI
Sbjct: 374 ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE------- 426
Query: 613 DEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDA 672
V A P DKL +V+ L+++G VVA+ GDG NDA
Sbjct: 427 --------------------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDA 460
Query: 673 PALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTV 732
PAL AAD+G++MG G++VA E++DIV+++D+ SS+ T + R I++ L + L
Sbjct: 461 PALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGY 519
Query: 733 NVAALVINFGA 743
N+ A+ + G
Sbjct: 520 NLVAIPLAAGG 530
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 2e-29
Identities = 137/569 (24%), Positives = 233/569 (40%), Gaps = 137/569 (24%)
Query: 157 VGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGES---------DRVEVDEKNPFLLSG 207
G++V ++ G+ IP+DG + G VDES++TGES D V G
Sbjct: 125 KGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSV-------TGG 176
Query: 208 TKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLV 267
T+V + + + +T+ T M++ + ++TP + L L S GLT+ + +
Sbjct: 177 TRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLS-----GLTL-IFL 230
Query: 268 LAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVT 327
LAV + F + GG SV ++A V +I I GL A+
Sbjct: 231 LAVATLYPFA----------IYSGGGAA------SVTVLVALLVCLIPTTI-GGLLSAIG 273
Query: 328 LTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSD 387
+ M R+ + + + A E G T+ DKTGT+TL + +EF + +
Sbjct: 274 IA---GMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVSEEE 330
Query: 388 ACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDE 447
+L + +P ++I+ A LG+ + E
Sbjct: 331 LADAAQLASLAD--------------------------ETPEGRSIVELAK-KLGIELRE 363
Query: 448 PKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRIL 507
V F ++ + SG ++ KGA + I +R
Sbjct: 364 DDLQSHAEFVP-FTAQTRMSG-----VDLPGGREIRKGAVDAIR----------RYVRER 407
Query: 508 DGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRP 567
G ++ + E++ + +G++ LG++ LKD +P
Sbjct: 408 GGHIPEDLDAAVDEVSRLGGTPLVVVE------NGRI-----------LGVIYLKDIVKP 450
Query: 568 GVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSA 627
G++ R G+ M+TGDN TA AIA E G VD
Sbjct: 451 GIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG-----VD------------------ 487
Query: 628 EERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQ 687
+A ++P DKL +++ + +G +VA+TGDGTNDAPAL AD+G++M
Sbjct: 488 ----------DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-S 536
Query: 688 GTEVAKESSDIVIMDDNFSSVVTVLRWGR 716
GT+ AKE++++V +D N + ++ V+ G+
Sbjct: 537 GTQAAKEAANMVDLDSNPTKLIEVVEIGK 565
|
Length = 681 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 2e-28
Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 34/195 (17%)
Query: 554 TLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKD 613
L G++ L D +P + +++ + G+ M+TGDN TA+A+A E GI N
Sbjct: 404 ELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIEN-------- 455
Query: 614 EAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAP 673
V A P DK +++ L++KG VVA+ GDG NDAP
Sbjct: 456 -------------------------VRAEVLPDDKAALIKKLQEKGKVVAMVGDGINDAP 490
Query: 674 ALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVN 733
AL AD+G+++G GT+VA E++D+V++ ++ + V T + R I++ L + N
Sbjct: 491 ALAQADVGIAIG-AGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYN 549
Query: 734 VAALVINFGAAVSSG 748
V A+ I G +G
Sbjct: 550 VIAIPIAAGVLYPAG 564
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 5e-26
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 39/206 (18%)
Query: 554 TLLGLVGLKDPCRPGVRAAVESCRNAGV-NVKMVTGDNVHTARAIAIECGILNPDVDLNK 612
T LG + L D RP A+ + G+ V M+TGD A +A E GI
Sbjct: 352 TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGI--------- 402
Query: 613 DEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDA 672
DE V A P DKL +V+ L++K VA+ GDG NDA
Sbjct: 403 DE------------------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDA 438
Query: 673 PALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTV 732
PAL AAD+G++MG G++VA E++D+V+++D+ S + +R R +++ + L +
Sbjct: 439 PALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGI 498
Query: 733 NVAALVINFGAAVSSGKVPLTAVQLL 758
+ +++ G +PL L
Sbjct: 499 ILLLILLALF-----GVLPLWLAVLG 519
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 1e-24
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 33/284 (11%)
Query: 99 WFDGGSIIFAVFLVVS--VSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVV 156
+F+ +++ ++ + A + + R +AL + + V DG + + +V
Sbjct: 173 YFEEAAML-IFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQ 231
Query: 157 VGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGF 216
VG++V ++ G++IP DG+ ++G S VDES +TGES VE + + +GT G
Sbjct: 232 VGDIVLVRPGERIPVDGVVVSGSSS-VDESMLTGESLPVEKKPGDE-VFAGTVNLDGSLT 289
Query: 217 MLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAV--MLIR 274
+ VT VG T ++ + + + P+Q +++ S+ VLV+A +
Sbjct: 290 IRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASY-----FVPVVLVIAALTFALW 344
Query: 275 YFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSM 334
G + A+ ++V+A P L LA + +
Sbjct: 345 PLFGG---------------------GDWETALYRALAVLVIACPCALGLATPTAILVGI 383
Query: 335 KRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFW 378
R + +++ A E + T+ DKTGTLT + +VT+
Sbjct: 384 GRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVV 427
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 1e-22
Identities = 70/319 (21%), Positives = 136/319 (42%), Gaps = 39/319 (12%)
Query: 78 LLVC--ALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESS 135
LL+ + + G+ +G ++F L ++ + + S AL +
Sbjct: 3 LLMALATIAAYAMGL--------VLEGALLLFLFLLGETLEERAKGRASDALSALLALAP 54
Query: 136 DIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRV 195
+ DG + + ++ VG++V ++ G++IP DG+ ++G S VDES++TGES V
Sbjct: 55 STARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESE-VDESALTGESMPV 113
Query: 196 EVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSW 255
E E + + +GT G + VT +G + +++ + + + P+Q +++ S+
Sbjct: 114 EKKEGDE-VFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADRIASY 172
Query: 256 IGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIV 315
AVL +A++ V + A+ ++V
Sbjct: 173 -----YVPAVLAIALLTF---------------VVWLALGALGA-------LYRALAVLV 205
Query: 316 VAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVT 375
VA P L LA + + ++ + +++ A E + T+ DKTGTLT + V
Sbjct: 206 VACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVV 265
Query: 376 EFWLGKEAMKSDACSLELA 394
+ +A S+ L LA
Sbjct: 266 DIEPLDDASISEEELLALA 284
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 96.4 bits (241), Expect = 2e-20
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 34/150 (22%)
Query: 555 LLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDE 614
+LG++ LKD +PG++ R G+ M+TGDN TA AIA E G VD
Sbjct: 436 VLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG-----VD----- 485
Query: 615 AVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPA 674
+A ++P DKL +++ + +G +VA+TGDGTNDAPA
Sbjct: 486 -----------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPA 522
Query: 675 LRAADIGLSMGIQGTEVAKESSDIVIMDDN 704
L AD+G++M GT+ AKE+ ++V +D N
Sbjct: 523 LAQADVGVAMN-SGTQAAKEAGNMVDLDSN 551
|
Length = 679 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 94.3 bits (235), Expect = 7e-20
Identities = 63/302 (20%), Positives = 133/302 (44%), Gaps = 37/302 (12%)
Query: 76 IILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESS 135
+++ + AL ++ G + +G ++ + ++ ++ + R +AL +
Sbjct: 3 LLMALAALGAVAIGE--------YLEGALLLLLFSIGETLEEYASGRARRALKALMELAP 54
Query: 136 DIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRV 195
D V+R G +++ ++ VG+VV +K G+++P DG+ L+G S VDES++TGES V
Sbjct: 55 D-TARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTST-VDESALTGESVPV 112
Query: 196 EVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSW 255
E + +G G ++VT + + ++++ + + + Q +++ +
Sbjct: 113 EK-APGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARY 171
Query: 256 IGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIV 315
T VL +A+ + V G K + A+ ++V
Sbjct: 172 -----YTPVVLAIALAIW---------------LVPGLLKRWPFW------VYRALVLLV 205
Query: 316 VAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVT 375
VA P L ++ ++ + +++ +A E + T+ DKTGTLT + KV
Sbjct: 206 VASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVV 265
Query: 376 EF 377
+
Sbjct: 266 DV 267
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 92.0 bits (229), Expect = 3e-19
Identities = 62/282 (21%), Positives = 124/282 (43%), Gaps = 32/282 (11%)
Query: 99 WFDGGSIIFAVFLVV--SVSAVSNFKQSRQFQALA-NESSDIRVEVVRDGRRRGLSIFDV 155
+FD +++ F+++ + ++ + S LA + S + + DG + + +
Sbjct: 53 FFDASAMLI-TFILLGRWLEMLAKGRASDALSKLAKLQPSTATL-LTDDGEIEEVPVELL 110
Query: 156 VVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYG 215
G++V + G++IP DG + G S +VDES +TGES V +P +++GT G
Sbjct: 111 QPGDIVRVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVGDP-VIAGTVNGTGSL 168
Query: 216 FMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRY 275
+ T+ G T +++ + + P+Q +K+ + + + +A++ + LI
Sbjct: 169 VVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLI-- 226
Query: 276 FTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMK 335
+ + AVT++++A P L LA +A +
Sbjct: 227 LGADFVFA-----------------------LEVAVTVLIIACPCALGLATPTVIAVATG 263
Query: 336 RMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEF 377
K+ +++ A E + T+ DKTGTLT + VT+
Sbjct: 264 LAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDV 305
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 92.8 bits (231), Expect = 4e-19
Identities = 117/523 (22%), Positives = 181/523 (34%), Gaps = 141/523 (26%)
Query: 342 AMVRKLSACETMGSATTICTDKTGTLTLNQMKV-----------TEFWLGKEAMKSDACS 390
A VR + E +G I +DKTGTLT N M+ F K+ ++ S
Sbjct: 345 ASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGS 404
Query: 391 LELAQNLYELLQEAVGL-------NTTGNVYNS--------------------NSLSTSE 423
+N + + N N+ N E
Sbjct: 405 YVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEE 464
Query: 424 IT---GSPTEKAILSWA-------------MIDLGMNVDEPKQYCTVINVEAFNSEKKRS 467
IT SP E A++ A I L + + + ++NV FNS++KR
Sbjct: 465 ITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRM 524
Query: 468 GVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKI---IQEMAA 524
V++ R + KGA +I + L E+ ++ A+
Sbjct: 525 SVIV-RNPDGRIKLLCKGADTVIF-------------KRLSSGGNQVNEETKEHLENYAS 570
Query: 525 KSLR--CIA---------------FAHTKAA----EADGQVQEKLEETGLTLLGLVGLKD 563
+ LR CIA + A E V + E L LLG ++D
Sbjct: 571 EGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIED 630
Query: 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPD-----------VDLNK 612
+ GV +E R AG+ + ++TGD V TA I C +L+ +
Sbjct: 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSLDATRS 690
Query: 613 DEAVIE------GVQFRSLSAEERIAKI-----------ESIRVM-------------AR 642
EA I+ +F +L +A + E + R
Sbjct: 691 VEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCR 750
Query: 643 SSPLDKLLMVQSLKQK-GHVVAVTGDGTNDAPALRAADIGLSMGIQGTE--VAKESSDIV 699
SP K +V+ +K+ G GDG ND ++ AD+G+ GI G E A +SD
Sbjct: 751 VSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV--GISGKEGMQAVMASDFA 808
Query: 700 IMDDNFSSVVTVLRW-GRCVYNNIQKFLQFQLTVNVAALVINF 741
I F + +L GR Y I K + + N+ +I F
Sbjct: 809 I--GQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQF 849
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 90.7 bits (225), Expect = 1e-18
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 34/162 (20%)
Query: 555 LLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDE 614
+ G++ LKD + G++ R G+ M+TGDN TA AIA E G+ +
Sbjct: 437 IYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD--------- 487
Query: 615 AVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPA 674
+A ++P DK+ +++ + +G +VA+TGDGTNDAPA
Sbjct: 488 ------------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPA 523
Query: 675 LRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGR 716
L AD+G++M GT+ AKE++++V +D + + ++ V+ G+
Sbjct: 524 LAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGK 564
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 88.1 bits (219), Expect = 1e-17
Identities = 76/256 (29%), Positives = 108/256 (42%), Gaps = 76/256 (29%)
Query: 537 AAEADGQVQEKLEETGLT---------LLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVT 587
A GQ+ E LE G T +LGL+ L+D R R A+ + G+ M+T
Sbjct: 533 ADAFAGQINE-LESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLT 591
Query: 588 GDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLD 647
GDN A AIA E GI FR A P D
Sbjct: 592 GDNPRAAAAIAGELGI-----------------DFR-----------------AGLLPED 617
Query: 648 KLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSS 707
K+ V L Q +A+ GDG NDAPA++AA IG++MG GT+VA E++D + +
Sbjct: 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRG 675
Query: 708 VVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQL---------L 758
+ ++ R + NI++ N+ I G L A+ L L
Sbjct: 676 LAQMIELSRATHANIRQ--------NIT---IALG---------LKAIFLVTTLLGITGL 715
Query: 759 WVNLIMDTLGALALAT 774
W+ ++ D+ GA AL T
Sbjct: 716 WLAVLADS-GATALVT 730
|
Length = 741 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 86.3 bits (213), Expect = 3e-17
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 34/181 (18%)
Query: 555 LLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDE 614
+LG++ LKD + G+ R G+ M TGDN TA IA E G+
Sbjct: 432 ILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV----------- 480
Query: 615 AVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPA 674
R +A P DK+ +++ + KGH+VA+TGDGTNDAPA
Sbjct: 481 ----------------------DRFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPA 518
Query: 675 LRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNV 734
L A++GL+M GT AKE+++++ +D N + ++ V+ G+ + F + ++
Sbjct: 519 LAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDI 577
Query: 735 A 735
A
Sbjct: 578 A 578
|
Length = 673 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 85.6 bits (212), Expect = 6e-17
Identities = 56/169 (33%), Positives = 81/169 (47%), Gaps = 34/169 (20%)
Query: 558 LVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVI 617
L+ ++DP R AA++ AG + M+TGDN TA AIA E GI + VI
Sbjct: 644 LLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI----------DEVI 693
Query: 618 EGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRA 677
GV P K ++ L+ +G VA+ GDG NDAPAL
Sbjct: 694 AGVL-----------------------PDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQ 730
Query: 678 ADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFL 726
AD+G++MG G++VA E++ I +M + V L R N+++ L
Sbjct: 731 ADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNL 778
|
Length = 834 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 68.0 bits (167), Expect = 6e-14
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 408 NTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRS 467
N N + EI G PTE A+L +A LG++V+E + + FNSE+KR
Sbjct: 4 NDAKFGEN-EEKNGGEIIGDPTESALLVFAE-KLGIDVEELRARYPRVAEIPFNSERKRM 61
Query: 468 GVLMKRINEKVFHTHWKGAAEMILVMCSHY 497
+ K ++ + KGA E IL CS
Sbjct: 62 STVHKLEDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 1e-11
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 22/161 (13%)
Query: 519 IQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRN 578
+E+ + L E + L +LGL+ L DP PG R A++ +
Sbjct: 49 REELVRRLLLRALAGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKE 108
Query: 579 AGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIR 638
AG+ + ++TGDN TA AIA G+ +A++ A + +
Sbjct: 109 AGIKLAILTGDNRLTANAIARLLGL---------FDALV-------------SADLYGLV 146
Query: 639 VMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAAD 679
+ + P L ++ L K V + GDG ND PA +AA
Sbjct: 147 GVGKPDPKIFELALEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 56.8 bits (138), Expect = 3e-10
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 18 GGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIII 77
V +V + L D + G+ +EA+ R+ +G N + K FKD +II
Sbjct: 4 LSVEEVLARLGTDLEKGLTEAEAE--ERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVII 61
Query: 78 LLVCALLS 85
LL+ A++S
Sbjct: 62 LLIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 62.0 bits (150), Expect = 1e-09
Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 39/285 (13%)
Query: 104 SIIFAVFLVVSVSAV-SNFKQS-------RQFQALANESSDIRVEVVR-DGRRRGLSIFD 154
+F++F+++ ++ V +NF ++ Q AL ++++ ++ DG + D
Sbjct: 63 LYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASD 122
Query: 155 VVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKNPF--LLSGTKVTA 212
+ G +V + TG+QIP DG + G + VDES++TGES V + F ++ GT V +
Sbjct: 123 LKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVAS 181
Query: 213 GYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVML 272
+ + +TS + +M+ + ++TP + L L +T+ ++ L V+L
Sbjct: 182 DWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLL-------MTLTIIFLVVIL 234
Query: 273 IRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAF 332
Y F + S+ +IA AV +I I GL A+ +
Sbjct: 235 TMYPLAK----------------FLNFNLSIAMLIALAVCLIPTTI-GGLLSAIGIA--- 274
Query: 333 SMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEF 377
M R+ + + + + + ET G + DKTGT+T F
Sbjct: 275 GMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAF 319
|
Length = 673 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 9e-08
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 624 SLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS 683
SL I RV A + P K +++ LK++ V + G+G ND ALR AD+G+
Sbjct: 58 SLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGI- 116
Query: 684 MGIQGTEV---AKESSDIVIMD 702
IQ V ++D+V+ +
Sbjct: 117 CTIQQEGVPERLLLTADVVLKE 138
|
Length = 152 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 1e-06
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 34/224 (15%)
Query: 158 GEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKNPF--LLSGTKVTAGYG 215
G++V ++ GD IP DG + G + VDES++TGES V + F + GT++ + +
Sbjct: 127 GDIVLVEAGDVIPCDGEVIEGVA-SVDESAITGESAPVIKESGGDFASVTGGTRILSDWL 185
Query: 216 FMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVML--I 273
+ T+ T M++ + +TP + L L I LT+ L++ L
Sbjct: 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILL-----IALTLVFLLVTATLWPF 240
Query: 274 RYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFS 333
+ GN SV ++A V +I I GL A+ +
Sbjct: 241 AAYGGNAI--------------------SVTVLVALLVCLIPTTI-GGLLSAIGIA---G 276
Query: 334 MKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEF 377
M R++ + + A E G T+ DKTGT+TL +EF
Sbjct: 277 MDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEF 320
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 3e-05
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 20 VNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILL 79
+ +V L D + G+ EA R+ +G N P + F + I ILL
Sbjct: 9 LEEVLERLQTDLEKGLSSEEAA--RRLERYGPNELPPPKKTSPLLRFLRQFHNPLIYILL 66
Query: 80 VCALLSL 86
A+LS
Sbjct: 67 AAAVLSA 73
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 5e-05
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 33/240 (13%)
Query: 141 VVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGE---SDRVEV 197
VV D + + + DV G ++ L TGD++P DG G + +DE+ +TGE + E
Sbjct: 327 VVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEAW-LDEAMLTGEPIPQQKGEG 385
Query: 198 DEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIG 257
D + +GT V G ++VG T ++ + QA+ +K IG
Sbjct: 386 DS----VHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVR---------QAQSSK--PEIG 430
Query: 258 KIGLTV-AVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVV 316
++ + AV V V++I + F G + V VI A T++++
Sbjct: 431 QLADKISAVFVPVVVVIALVSA------AIWYFFGPAPQI--VYTLVI-----ATTVLII 477
Query: 317 AIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTE 376
A P L LA +++ + R + +VR A + + T+ DKTGTLT + +V
Sbjct: 478 ACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVA 537
|
Length = 834 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 44.0 bits (105), Expect = 4e-04
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 48/232 (20%)
Query: 157 VGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGES---------DRVEVDEKNPFLLSG 207
G++V ++ G+ IPADG + G VDES++TGES D V G
Sbjct: 125 KGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSV-------TGG 176
Query: 208 TKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLV 267
T+V + + + +T+ + M++ + ++TP + L L + GLT+ + +
Sbjct: 177 TRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLA-----GLTI-IFL 230
Query: 268 LAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVT 327
L V + F + GG S+ ++A V +I I GL A+
Sbjct: 231 LVVATLPPFAA----------YSGGAL-------SITVLVALLVCLIPTTI-GGLLSAIG 272
Query: 328 LTLAFSMKRMMKDHAMVRKLS--ACETMGSATTICTDKTGTLTLNQMKVTEF 377
+ M R+++ A V S A E G T+ DKTGT+TL + +EF
Sbjct: 273 IA---GMDRVLQ--ANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEF 319
|
Length = 679 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 4e-04
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 141 VVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEK 200
+RDG R ++I D+ G+V+ + G ++PADG L+ DES++TGES VE
Sbjct: 247 RLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP-FASFDESALTGESIPVE---- 301
Query: 201 NPFLLSGTKVTAG 213
+G KV AG
Sbjct: 302 ---RATGEKVPAG 311
|
Length = 741 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 6e-04
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 550 ETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGIL 604
E LT+LG ++D + GV A+ES R AG+ V ++TGD TA +I +L
Sbjct: 712 ENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLL 766
|
Length = 1178 |
| >gnl|CDD|221729 pfam12710, HAD, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.002
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 15/94 (15%)
Query: 583 VKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642
V +V+G R +A GI + +V + E V+ V R + K +++ +A+
Sbjct: 44 VVIVSGSPEPLVRPVAKALGIDDVNVVGTELENVL--VDGRLTGKLDGEGKAAALKRLAQ 101
Query: 643 SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALR 676
++ V GD +D PAL+
Sbjct: 102 KIGRYPVVAV-------------GDSISDLPALK 122
|
Length = 122 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 941 | |||
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.96 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.89 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.87 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.56 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.44 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.35 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.33 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.27 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.26 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.26 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.25 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.22 | |
| PLN02887 | 580 | hydrolase family protein | 99.19 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.15 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.14 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.13 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.12 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.07 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.06 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.03 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.01 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.0 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.94 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.93 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.84 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.79 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.78 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.75 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.72 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.64 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.53 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.52 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.51 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.51 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.41 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.37 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.3 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.24 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.23 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.19 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.12 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.05 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.04 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.04 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.03 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.99 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.97 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.96 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.96 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.94 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.88 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.85 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.85 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.64 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.53 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.53 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.51 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.5 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.5 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.46 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.34 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.32 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.32 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.3 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.28 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.26 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.23 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.22 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.2 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.15 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.07 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.02 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.02 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.0 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.95 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.93 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.78 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.75 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.63 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.57 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.55 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.53 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.46 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.45 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.44 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.36 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.36 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.33 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.28 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.24 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.21 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.16 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.09 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.96 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.9 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.86 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 95.85 | |
| PLN02940 | 382 | riboflavin kinase | 95.84 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 95.76 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.76 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.73 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 95.69 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.67 | |
| PLN02423 | 245 | phosphomannomutase | 95.66 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 95.59 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.57 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 95.4 | |
| PLN03017 | 366 | trehalose-phosphatase | 95.33 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.3 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 95.19 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 95.18 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.11 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 94.85 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 94.82 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 94.78 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 94.46 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 94.31 | |
| PLN02811 | 220 | hydrolase | 94.25 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 94.15 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 94.0 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 94.0 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 93.89 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 93.6 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 93.16 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 92.92 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 92.86 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 92.65 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 92.48 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 92.44 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 92.12 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 91.64 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 91.51 | |
| PLN02151 | 354 | trehalose-phosphatase | 91.18 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 91.15 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 90.26 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 90.2 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 90.06 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 89.93 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 89.7 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 89.42 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 89.27 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 86.23 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 84.81 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 83.57 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 82.73 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 82.66 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 80.13 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 80.06 |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-165 Score=1362.52 Aligned_cols=923 Identities=52% Similarity=0.855 Sum_probs=862.8
Q ss_pred cchhcccCChhHHhhhCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHH
Q 047874 2 LSKMVKEKSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVC 81 (941)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~ 81 (941)
|.++.+.+|.+.|+++|++|+++++|+||+..||+.+++|..+|++.||+|.+|++++++||.++|+.|++...+++.++
T Consensus 85 l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~va 164 (1034)
T KOG0204|consen 85 LVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVA 164 (1034)
T ss_pred HHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHH
Confidence 66788999999999999999999999999999999988899999999999999999999999999999999999999999
Q ss_pred HHHHhhhcccccCCcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEE
Q 047874 82 ALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVV 161 (941)
Q Consensus 82 ~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI 161 (941)
|++|+.+++.+.+...+|+++..|+++++++++++++.+|++++++++|++.....++.|+|||+.++|+..||+||||+
T Consensus 165 AvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv 244 (1034)
T KOG0204|consen 165 AVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIV 244 (1034)
T ss_pred HHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEE
Confidence 99999999999888889999999999999999999999999999999999888888999999999999999999999999
Q ss_pred EEcCCCeeecceEEEecceEEEeeccCCCCCCceecCC-CCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCC
Q 047874 162 CLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDE-KNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELN 240 (941)
Q Consensus 162 ~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~-~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~ 240 (941)
.++.||.+||||++++|++|.+|||++||||++++|.. .++++++||++.+|.++++|+++|.+|+.|+++..+.....
T Consensus 245 ~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~ 324 (1034)
T KOG0204|consen 245 QLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGE 324 (1034)
T ss_pred EeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCC
Confidence 99999999999999999999999999999999999996 78999999999999999999999999999999999998888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCC
Q 047874 241 EETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPE 320 (941)
Q Consensus 241 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~ 320 (941)
+++|+|-++++++..+..+++.+|.+++++++++|+.+....+.+. .........+.+.+.|..++.++++++|+
T Consensus 325 e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~-----~~~~~~~~~~~~v~~f~i~VTilVVAVPE 399 (1034)
T KOG0204|consen 325 EETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGT-----GTTWSDEYIQEFVKFFIIAVTILVVAVPE 399 (1034)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCC-----CccccHHHHHHHHHHhhheeEEEEEECCC
Confidence 9999999999999999999999999999999999988765443221 11222344567888899999999999999
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccch-hhhhHHHHH
Q 047874 321 GLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACS-LELAQNLYE 399 (941)
Q Consensus 321 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~ 399 (941)
|||+++++++++++++|.+++.++|.++++|++|+.++||+|||||||.|+|+|.+.|++++.++.+... ..+++...+
T Consensus 400 GLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ 479 (1034)
T KOG0204|consen 400 GLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLD 479 (1034)
T ss_pred CccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998887743322 357788889
Q ss_pred HHHHHHhccCccccccCCCCC-CccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCce
Q 047874 400 LLQEAVGLNTTGNVYNSNSLS-TSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKV 478 (941)
Q Consensus 400 ~l~~~~~~~~~~~~~~~~~~~-~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~ 478 (941)
++.++++.|++..+..++..+ ..++.|+|+|+|++.|.. ++|.+++..+.+..+.+++||+|.||+|+++++..+++.
T Consensus 480 ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~-~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~ 558 (1034)
T KOG0204|consen 480 LLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGL-KLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGH 558 (1034)
T ss_pred HHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHH-HhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCe
Confidence 999999999988888766654 678899999999999999 799999999999999999999999999999999887776
Q ss_pred EEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccc--c--ccchhhhhccCcE
Q 047874 479 FHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEA--D--GQVQEKLEETGLT 554 (941)
Q Consensus 479 ~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~--~--~~~~~~~~e~~l~ 554 (941)
| +++|||+|.|+.+|+++.+.+|+..+++++.+..+++.++.|+.+|+||+|+||++..+. + ....++..+.|++
T Consensus 559 y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt 637 (1034)
T KOG0204|consen 559 Y-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLT 637 (1034)
T ss_pred E-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeE
Confidence 6 999999999999999999999999999999999999999999999999999999985443 1 1122356789999
Q ss_pred EEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhh
Q 047874 555 LLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKI 634 (941)
Q Consensus 555 ~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 634 (941)
++|+++++||.|||++++|+.||+|||.|.|+||||..||++||.+|||..++. +..+++|.+|+++++++.++..
T Consensus 638 ~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~----d~~~lEG~eFr~~s~ee~~~i~ 713 (1034)
T KOG0204|consen 638 LLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGG----DFLALEGKEFRELSQEERDKIW 713 (1034)
T ss_pred EEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCC----ccceecchhhhhcCHHHHHhhh
Confidence 999999999999999999999999999999999999999999999999998753 4689999999999999999999
Q ss_pred cCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 635 ESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 635 ~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
++.+|+||++|.+|.-+|+.++++|++|+++|||+||+|||+.||||.|||..|+++|||+||++++||+|++|++++++
T Consensus 714 pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~W 793 (1034)
T KOG0204|consen 714 PKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKW 793 (1034)
T ss_pred hhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCc
Q 047874 715 GRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLI 794 (941)
Q Consensus 715 gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~ 794 (941)
||+.|.||+|+++|+++.|+.++++.|.+....+.+||++.|+||+|++||.+.+++||.|||.+++|+|+|..|+++++
T Consensus 794 GR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LI 873 (1034)
T KOG0204|consen 794 GRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLI 873 (1034)
T ss_pred hhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCc------cccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccHHH
Q 047874 795 TKIMWRNLISQAIYQVAILLTLQFKGRSILGVK------ESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLF 868 (941)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~ 868 (941)
++.||++++.+++||..+++.+.|.+...|+.. +..+.|++|++||+||+||.+|.|..++.++|+++++|++|
T Consensus 874 t~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F 953 (1034)
T KOG0204|consen 874 TRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLF 953 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceE
Confidence 999999999999999999999999998887542 45678999999999999999999999889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhccccCcccccchHHhh
Q 047874 869 LAIIGITIALQLVMVEFLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPVSGKQLLPINQEAS 935 (941)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 935 (941)
+..+.+.+++|++++.+++.+|++++++|.+|++|+.++++.+++..++|.+|.+..|+.......+
T Consensus 954 ~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~~~~~~~~~~~~ 1020 (1034)
T KOG0204|consen 954 CVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSSLPKLKYAGLGG 1020 (1034)
T ss_pred EEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheeccccccccceeeccCc
Confidence 9999999999999999999999999999999999999999999999999999987777765554443
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-150 Score=1251.68 Aligned_cols=875 Identities=33% Similarity=0.485 Sum_probs=761.7
Q ss_pred CCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcC
Q 047874 18 GGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKE 97 (941)
Q Consensus 18 ~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~ 97 (941)
.+++|+++.|++|+++|||++| +.+|+++||+|+++.++.+++|+.+++||.+++..+|+++|++|+.+.
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~-------- 76 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA-------- 76 (972)
T ss_pred CcHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH--------
Confidence 6899999999999999999988 999999999999999999999999999999999999999999999997
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEe
Q 047874 98 GWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLN 177 (941)
Q Consensus 98 ~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~ 177 (941)
.|.++++|.+++++++.++.+|||+++|++++|++. .+..++|+|+|+.+.++++||||||||.++-||+||||.|+++
T Consensus 77 ~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l-~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKEL-VPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhc-CCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 466788889999999999999999999999999976 4678999999999999999999999999999999999999999
Q ss_pred cceEEEeeccCCCCCCceecCC-------------CCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCCh
Q 047874 178 GHSLKVDESSMTGESDRVEVDE-------------KNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETP 244 (941)
Q Consensus 178 g~~l~Vdes~LTGEs~pv~k~~-------------~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 244 (941)
..++.||||.|||||.|+.|.. +.|++|+||.|..|.++++|+.||.+|++|++...++..+.++||
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9999999999999999999852 457899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhH
Q 047874 245 LQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPL 324 (941)
Q Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~ 324 (941)
+|++++.+...+..+...+++.+.++-+ .++... . ....++.....+|..++++.++++|+|||+
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~ni-g~f~~p-~-------------~~g~~fk~~~~~f~IaVsLAVAAIPEGLPa 300 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNI-GHFLDP-V-------------HGGSWFKGALYYFKIAVSLAVAAIPEGLPA 300 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhh-hhhccc-c-------------ccccchhchhhhhhHHHHHHHHhccCCCcc
Confidence 9999999999987555444443333321 222210 0 001112256788899999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccc------cc---------
Q 047874 325 AVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSD------AC--------- 389 (941)
Q Consensus 325 ~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~------~~--------- 389 (941)
.++++++.|.+||+|++++||++.++|+||.+++||+|||||||+|+|+++++|+.+...... ..
T Consensus 301 VvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~ 380 (972)
T KOG0202|consen 301 VVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVF 380 (972)
T ss_pred hhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceE
Confidence 999999999999999999999999999999999999999999999999999999865432211 00
Q ss_pred -------hhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcC---------------
Q 047874 390 -------SLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDE--------------- 447 (941)
Q Consensus 390 -------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~--------------- 447 (941)
......+....+....++|+.+.+..... +..+-.|.|+|.||..+++ +.++.-..
T Consensus 381 ~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~~G~pTE~AL~vlae-Km~l~~~~~~~~s~~~~~~c~~~ 458 (972)
T KOG0202|consen 381 KDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDA-DCYEKVGEPTEGALIVLAE-KMGLPGTRSTNLSNEEASACNRV 458 (972)
T ss_pred ecCccccccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHhcCCchHHHHHHHHH-HcCCCcchhhcccccccccchhH
Confidence 01112233444556667788777765444 5666789999999999998 77765422
Q ss_pred cccccceeEEeCCCCCCCcEEEEEEecCC-ceEEEEecCcHHHHHhhcccccccCC-eEeeCCHHHHHHHHHHHHHHHhc
Q 047874 448 PKQYCTVINVEAFNSEKKRSGVLMKRINE-KVFHTHWKGAAEMILVMCSHYYVKSG-TIRILDGEERTQIEKIIQEMAAK 525 (941)
Q Consensus 448 ~~~~~~~l~~~~F~s~~k~~sviv~~~~~-~~~~~~~KGa~e~i~~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~ 525 (941)
..+.++...++||+|+||+|+|.+....+ ..+.+|+|||+|.|+++|++++..+| ...++++..++.+.+...+++++
T Consensus 459 ~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~ 538 (972)
T KOG0202|consen 459 YSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSE 538 (972)
T ss_pred HHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhc
Confidence 11234566999999999999999986655 45789999999999999999988777 55999999999999999999999
Q ss_pred ccceeeeeeecccc-ccc------cchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHH
Q 047874 526 SLRCIAFAHTKAAE-ADG------QVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIA 598 (941)
Q Consensus 526 g~r~l~~a~~~~~~-~~~------~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia 598 (941)
|+||+++|+++.+. ... ...+...|+||+|+|++++.||||++++++|+.|+++||||+|+|||+..||.+||
T Consensus 539 gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~ 618 (972)
T KOG0202|consen 539 GLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIA 618 (972)
T ss_pred cceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH
Confidence 99999999997763 111 12245579999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhC
Q 047874 599 IECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAA 678 (941)
Q Consensus 599 ~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A 678 (941)
+++|+...+.. ....+++|.+++++++++..+...++.+|+|++|.+|.+||+.||++|+.|+|+|||.||+|+||.|
T Consensus 619 r~iGi~~~~ed--~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~A 696 (972)
T KOG0202|consen 619 REIGIFSEDED--VSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKA 696 (972)
T ss_pred HHhCCCcCCcc--ccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhc
Confidence 99999875432 4568999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHH
Q 047874 679 DIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLL 758 (941)
Q Consensus 679 ~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l 758 (941)
|||||||.+|+++||++||+|+.||||++|+.+++|||.+|+|+++++.|.++.|+..+...++...++.|.|++|+|+|
T Consensus 697 dIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiL 776 (972)
T KOG0202|consen 697 DIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQIL 776 (972)
T ss_pred ccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC------------
Q 047874 759 WVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGV------------ 826 (941)
Q Consensus 759 ~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 826 (941)
|+|+++|.+|+.+|+++||+.|+|++||++++++++++.++.+++..++|....+...+++.....+.
T Consensus 777 WiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~ 856 (972)
T KOG0202|consen 777 WINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNS 856 (972)
T ss_pred eeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhh
Confidence 99999999999999999999999999999999999999998888888877654433322211110011
Q ss_pred -------------ccccchhHHHHHHHHHHHHHHhhhccCCcccccc-cCcccHHHHHHHHHHHHHHHHH--HHHhhhcc
Q 047874 827 -------------KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFK-GIHKNKLFLAIIGITIALQLVM--VEFLKTFA 890 (941)
Q Consensus 827 -------------~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~~~~~~--~~~~~~~f 890 (941)
......|++|.++++..+||.+++++.+ .++|. ++|+|+||++++++++++|+++ +++++.+|
T Consensus 857 c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~-~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iF 935 (972)
T KOG0202|consen 857 CCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSEN-KSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIF 935 (972)
T ss_pred hcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCC-cceEEecccccHHHHHHHHHHHHhhheEEEechhhhhh
Confidence 0123458999999999999999999965 45555 9999999999999999998765 56899999
Q ss_pred cccCCChHHHHHHHHHHHHHHHHHHHHHhcccc
Q 047874 891 DTERLNWGQWAACIGIAAMSWPIGFLIKCIPVS 923 (941)
Q Consensus 891 ~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 923 (941)
+++++++.+|++++.++..+++++|++|++.|+
T Consensus 936 q~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~ 968 (972)
T KOG0202|consen 936 QTEPLSLAEWLLVLAISSPVIIVDEILKFIARN 968 (972)
T ss_pred eecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHh
Confidence 999999999999999999999999999999983
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-139 Score=1286.54 Aligned_cols=899 Identities=45% Similarity=0.739 Sum_probs=778.7
Q ss_pred chhccc-CChhHHhhhCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHH
Q 047874 3 SKMVKE-KSFESLSNLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVC 81 (941)
Q Consensus 3 ~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~ 81 (941)
.+..++ ++.+.|+++|+++++++.|++|.++|||.+++||++|+++||+|++++++++++|++++++|+++++++|+++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ 105 (941)
T TIGR01517 26 TDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVA 105 (941)
T ss_pred HHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHH
Confidence 344445 4678899999999999999999999999333449999999999999999889999999999999999999999
Q ss_pred HHHHhhhccc-----ccCCcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcc
Q 047874 82 ALLSLGFGIK-----QVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVV 156 (941)
Q Consensus 82 ~~ls~~~~~~-----~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv 156 (941)
++++++.+.. +.++...|++++.++++++++++++++++|+++++.+++++..++.+++|+|||++++|+++||+
T Consensus 106 ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv 185 (941)
T TIGR01517 106 AVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIV 185 (941)
T ss_pred HHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCC
Confidence 9999987632 23444579999998988999999999999999999999987666789999999999999999999
Q ss_pred cCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCC-CCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhh
Q 047874 157 VGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEK-NPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSI 235 (941)
Q Consensus 157 ~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~-~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 235 (941)
|||+|.+++||+|||||++++|+.+.||||+|||||.|+.|.++ +|++|+||.+.+|.+.++|++||.+|++||+.+.+
T Consensus 186 ~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~ 265 (941)
T TIGR01517 186 VGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMEL 265 (941)
T ss_pred CCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhh
Confidence 99999999999999999999997779999999999999999854 46899999999999999999999999999999988
Q ss_pred cccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHH
Q 047874 236 SHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIV 315 (941)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~ 315 (941)
.+++ +++|+++.++++.+++..+++.++++.++++++.+.......+.... ......+...+..++++++
T Consensus 266 ~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~al~llv 335 (941)
T TIGR01517 266 RAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDT---------EEDAQTFLDHFIIAVTIVV 335 (941)
T ss_pred ccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc---------chhhHHHHHHHHHHHHHHH
Confidence 7654 56899999999999999988888877777665433222100000000 0001256778889999999
Q ss_pred HHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhH
Q 047874 316 VAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQ 395 (941)
Q Consensus 316 ~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~ 395 (941)
++|||+||++++++++.++.+|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+++..+..++.+.......+
T Consensus 336 ~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~ 415 (941)
T TIGR01517 336 VAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPK 415 (941)
T ss_pred hhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999876543332211111123
Q ss_pred HHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecC
Q 047874 396 NLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRIN 475 (941)
Q Consensus 396 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~ 475 (941)
...+.+..++.+|+...... ++.+..+..|||+|.|+++++. +.+.+....+..+++++.+||+|++|+|+++++..+
T Consensus 416 ~~~~~l~~~~~~~s~~~~~~-~~~~~~~~~g~p~e~All~~~~-~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~ 493 (941)
T TIGR01517 416 HVRNILVEGISLNSSSEEVV-DRGGKRAFIGSKTECALLGFLL-LLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSG 493 (941)
T ss_pred HHHHHHHHHHHhCCCCcccc-CCCCccccCCCccHHHHHHHHH-HcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCC
Confidence 34455666666666543321 1122345679999999999987 666555444455677889999999999999998643
Q ss_pred CceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEE
Q 047874 476 EKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTL 555 (941)
Q Consensus 476 ~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~ 555 (941)
+++++++|||||.++++|+.+...+|...++++ .++.+++..++++++|+|++++||++++.++... .+..|+|++|
T Consensus 494 -~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~-~~~~e~~l~~ 570 (941)
T TIGR01517 494 -GKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFPR-KDYPNGGLTL 570 (941)
T ss_pred -CcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCcccccc-ccccccCcEE
Confidence 458899999999999999987666777777776 6788999999999999999999999886543322 2234789999
Q ss_pred EEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhc
Q 047874 556 LGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIE 635 (941)
Q Consensus 556 lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 635 (941)
+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||..+ ...+++|.+++++.++++.+.+.
T Consensus 571 lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~------~~~vi~G~~~~~l~~~el~~~i~ 644 (941)
T TIGR01517 571 IGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF------GGLAMEGKEFRRLVYEEMDPILP 644 (941)
T ss_pred EEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCC------CceEeeHHHhhhCCHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999864 34799999999999999999999
Q ss_pred CceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHH
Q 047874 636 SIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWG 715 (941)
Q Consensus 636 ~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 715 (941)
+..||||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||.+|+|.|+++||+++.+++|..+++++++|
T Consensus 645 ~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~g 724 (941)
T TIGR01517 645 KLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWG 724 (941)
T ss_pred cCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCcc
Q 047874 716 RCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLIT 795 (941)
Q Consensus 716 R~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~ 795 (941)
|++|+|+++++.|.+++|+..+++.+++.++++++|++++|++|+|+++|.+|+++++.|+|++++|++||+++++++++
T Consensus 725 R~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~ 804 (941)
T TIGR01517 725 RNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLIS 804 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCC
Confidence 99999999999999999999999999988888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCC---------ccccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccH
Q 047874 796 KIMWRNLISQAIYQVAILLTLQFKGRSILGV---------KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNK 866 (941)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~ 866 (941)
+.+|..++.++++++++.+++++.+..+++. .....+|++|.+++++|++|.+++|+.+..++|+++++|+
T Consensus 805 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~ 884 (941)
T TIGR01517 805 RSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNR 884 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccH
Confidence 9999999999999988877776655544422 1256789999999999999999999865557888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhccc
Q 047874 867 LFLAIIGITIALQLVMVEFLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922 (941)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~ 922 (941)
+++.++++++++|++++++++.+|++.|+++.+|+++++++++.+++.|+.|.+++
T Consensus 885 ~~~~~~~~~~~l~~~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~ 940 (941)
T TIGR01517 885 IFVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPV 940 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999874
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-135 Score=1252.77 Aligned_cols=865 Identities=27% Similarity=0.436 Sum_probs=735.8
Q ss_pred hCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCc
Q 047874 17 LGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLK 96 (941)
Q Consensus 17 ~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~ 96 (941)
-.+++++++.|+++..+|||++| +++|+++||+|++++++.+++|+.+++||++|++++++++++++++.+
T Consensus 9 ~~~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~------- 79 (1053)
T TIGR01523 9 SDIADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH------- 79 (1053)
T ss_pred hCCHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh-------
Confidence 45889999999999989999988 999999999999999988899999999999999999999999999876
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEE
Q 047874 97 EGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFL 176 (941)
Q Consensus 97 ~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll 176 (941)
.|.+++.++++++++.++++++++++++..+++.++ .+.+++|+|||++++|+++||||||||.|++||+|||||+|+
T Consensus 80 -~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l-~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi 157 (1053)
T TIGR01523 80 -DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNL-ASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLI 157 (1053)
T ss_pred -hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEE
Confidence 689999999999999999999999999999999976 456899999999999999999999999999999999999999
Q ss_pred ecceEEEeeccCCCCCCceecCC--------------CCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCC--
Q 047874 177 NGHSLKVDESSMTGESDRVEVDE--------------KNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELN-- 240 (941)
Q Consensus 177 ~g~~l~Vdes~LTGEs~pv~k~~--------------~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~-- 240 (941)
++++|.||||+|||||.|+.|.+ ..|++|+||.|.+|.+.++|++||.+|++||+.+.+.+...
T Consensus 158 ~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~ 237 (1053)
T TIGR01523 158 ETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLF 237 (1053)
T ss_pred EeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhcc
Confidence 99999999999999999999963 23689999999999999999999999999999998754321
Q ss_pred ---------------------------------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcc
Q 047874 241 ---------------------------------EETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKR 287 (941)
Q Consensus 241 ---------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (941)
.+||+|+++++++.++..+++.++++++++... .
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~----~--------- 304 (1053)
T TIGR01523 238 QRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF----D--------- 304 (1053)
T ss_pred ccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh----h---------
Confidence 249999999999998887777776665543211 0
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCccccc
Q 047874 288 EFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTL 367 (941)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTL 367 (941)
.....+.++++++++++|++||+.++++++++++||+++++++|+++++|+||++++||+||||||
T Consensus 305 --------------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTL 370 (1053)
T TIGR01523 305 --------------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTI 370 (1053)
T ss_pred --------------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCcc
Confidence 113456678999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceEEEEEEeCCc-c---------cccc-cc---------------h--------------h--h----hhHHHHHHH
Q 047874 368 TLNQMKVTEFWLGKE-A---------MKSD-AC---------------S--------------L--E----LAQNLYELL 401 (941)
Q Consensus 368 T~~~~~v~~~~~~~~-~---------~~~~-~~---------------~--------------~--~----~~~~~~~~l 401 (941)
|+|+|+|+++|..+. . +... .. . . + ..+...+.+
T Consensus 371 T~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 450 (1053)
T TIGR01523 371 TQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKL 450 (1053)
T ss_pred ccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHH
Confidence 999999999987531 1 1000 00 0 0 0 000112234
Q ss_pred HHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCc------C-------------------cccccceeE
Q 047874 402 QEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVD------E-------------------PKQYCTVIN 456 (941)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~------~-------------------~~~~~~~l~ 456 (941)
..+..+|+.+.....++.......|||+|.|+++++. +.|.+.. . ....++++.
T Consensus 451 l~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (1053)
T TIGR01523 451 LETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAK-KFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIA 529 (1053)
T ss_pred HHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHH-HcCCCcccccchhhhhhhccccccccccccccccccccceEE
Confidence 4455667766554322222234579999999999997 6776421 0 123478899
Q ss_pred EeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCC-eEeeCCHHHHHHHHHHHHHHHhcccceeeeeee
Q 047874 457 VEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSG-TIRILDGEERTQIEKIIQEMAAKSLRCIAFAHT 535 (941)
Q Consensus 457 ~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~ 535 (941)
++||+|+||||++++++.+++.+++|+|||||.|+++|+++...+| ...+++++.++.+.+..++++++|+||+++|||
T Consensus 530 ~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r 609 (1053)
T TIGR01523 530 EFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASK 609 (1053)
T ss_pred EeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEE
Confidence 9999999999999998765556889999999999999997765444 567899999999999999999999999999999
Q ss_pred cccccccc--------chhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCC
Q 047874 536 KAAEADGQ--------VQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPD 607 (941)
Q Consensus 536 ~~~~~~~~--------~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~ 607 (941)
+++..+.. ..++..|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||..++
T Consensus 610 ~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~ 689 (1053)
T TIGR01523 610 SFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPN 689 (1053)
T ss_pred ECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcc
Confidence 88653211 0123468999999999999999999999999999999999999999999999999999997542
Q ss_pred CCC----CcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEE
Q 047874 608 VDL----NKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS 683 (941)
Q Consensus 608 ~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 683 (941)
... .....+++|.+++.++++++.+...+..||||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||
T Consensus 690 ~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIA 769 (1053)
T TIGR01523 690 FIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIA 769 (1053)
T ss_pred ccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEe
Confidence 111 0134799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----C-CCchhHHHHH
Q 047874 684 MGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSS----G-KVPLTAVQLL 758 (941)
Q Consensus 684 m~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~----~-~~~l~~~~~l 758 (941)
||.+|++.++++||+++.+++|..+.+++++||++|+|+++++.|.+++|+..+++.+++.++. . +.|++|+|++
T Consensus 770 mg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL 849 (1053)
T TIGR01523 770 MGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEIL 849 (1053)
T ss_pred cCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHH
Confidence 9988999999999999999999999999999999999999999999999999998888877773 2 5799999999
Q ss_pred HHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH---hhc--c--------cC
Q 047874 759 WVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFK---GRS--I--------LG 825 (941)
Q Consensus 759 ~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~--------~~ 825 (941)
|+|+++|.+|+++|++|+|++++|++||+.++++++++.++..++..+++.++..+..+++ +.. . ++
T Consensus 850 ~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1053)
T TIGR01523 850 WCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYH 929 (1053)
T ss_pred HHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccccccc
Confidence 9999999999999999999999999999999999999999988888888877665544432 100 0 00
Q ss_pred C---ccccchhHHHHHHHHHHHHHHhhhccCCcccccc----------------cCcccHHHHHHHHHHHHHHHHH--HH
Q 047874 826 V---KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFK----------------GIHKNKLFLAIIGITIALQLVM--VE 884 (941)
Q Consensus 826 ~---~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~----------------~~~~n~~~~~~~~~~~~~~~~~--~~ 884 (941)
. +..+++|++|.+++++|+++.+++|+. +.++|+ +.|+|+++++++++++++++++ +|
T Consensus 930 ~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p 1008 (1053)
T TIGR01523 930 AGCNDVFKARSAAFATMTFCALILAVEVKDF-DNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIP 1008 (1053)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHhcC-chhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhh
Confidence 0 134578999999999999999999985 344443 3689999999999888888665 45
Q ss_pred Hhhh-cccccCCChHHHHHHHHHHHHHHHHHHHHHhccc
Q 047874 885 FLKT-FADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922 (941)
Q Consensus 885 ~~~~-~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~ 922 (941)
+++. +|++.|+++ .|+++++++++.+++.|++|++.|
T Consensus 1009 ~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r 1046 (1053)
T TIGR01523 1009 VINDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKR 1046 (1053)
T ss_pred hhhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6775 999999997 899999999999999999999875
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-131 Score=1209.67 Aligned_cols=841 Identities=32% Similarity=0.507 Sum_probs=739.4
Q ss_pred CCHHHHHHHhCCCCCCCCC-ccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHh-hHHHHHHHHHHHHHHhhhcccccCC
Q 047874 18 GGVNQVASILDCDTKGGIR-GSEADLGHRINVFGRNRYKKPPAKRFISFVFEAF-KDTTIIILLVCALLSLGFGIKQVGL 95 (941)
Q Consensus 18 ~~~~~~~~~l~~~~~~GLs-~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f-~~~~~~~lli~~~ls~~~~~~~~~~ 95 (941)
-+.+++++.|++|..+||| ++| +++|+++||+|+++.++++++|+.++++| ++|++++++++++++++.+
T Consensus 7 ~~~~~v~~~l~t~~~~GLs~~~e--v~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g------ 78 (884)
T TIGR01522 7 LSVEETCSKLQTDLQNGLNSSQE--ASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG------ 78 (884)
T ss_pred CCHHHHHHHhCcCcccCCCcHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc------
Confidence 3899999999999999999 655 99999999999999988889999999999 9999999999999999886
Q ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEE
Q 047874 96 KEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLF 175 (941)
Q Consensus 96 ~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~l 175 (941)
.|.++..+++++++++.+++++++++++..+++.+. .+.+++|+|||++++|+++||||||+|.+++||+|||||++
T Consensus 79 --~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 79 --NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred --chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 688888888888888999999999999999999865 45689999999999999999999999999999999999999
Q ss_pred EecceEEEeeccCCCCCCceecCCC-------------CCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCC
Q 047874 176 LNGHSLKVDESSMTGESDRVEVDEK-------------NPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEE 242 (941)
Q Consensus 176 l~g~~l~Vdes~LTGEs~pv~k~~~-------------~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 242 (941)
++|+++.||||+|||||.|+.|.++ +|++|+||.+.+|.+.++|++||.+|++|++.+.+.+...++
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 9998789999999999999999864 258999999999999999999999999999999998888889
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCch
Q 047874 243 TPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGL 322 (941)
Q Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L 322 (941)
+|+++.+++++.++..++++++++++++ .|+.+. ++...+..++++++++|||+|
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~---~~~~~~----------------------~~~~~~~~~v~llv~aiP~~L 290 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLV---GWFQGK----------------------DWLEMFTISVSLAVAAIPEGL 290 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhcC----------------------CHHHHHHHHHHHHHHHccchH
Confidence 9999999999999887665554433333 222221 456778889999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCccccc--------ccc-----
Q 047874 323 PLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKS--------DAC----- 389 (941)
Q Consensus 323 ~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~--------~~~----- 389 (941)
|++++++++.++++|+++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+..... +..
T Consensus 291 p~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (884)
T TIGR01522 291 PIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDG 370 (884)
T ss_pred HHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccc
Confidence 9999999999999999999999999999999999999999999999999999999875532110 000
Q ss_pred ---hhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCc
Q 047874 390 ---SLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKR 466 (941)
Q Consensus 390 ---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~ 466 (941)
....++...+.+ ...++|++...... ..+..|||+|.|+++++. +.|.+ ..+..++.++++||+|++||
T Consensus 371 ~~~~~~~~~~~~~~l-~~~~l~~~~~~~~~----~~~~~g~p~e~All~~~~-~~~~~--~~~~~~~~~~~~pF~s~~k~ 442 (884)
T TIGR01522 371 DVLHGFYTVAVSRIL-EAGNLCNNAKFRNE----ADTLLGNPTDVALIELLM-KFGLD--DLRETYIRVAEVPFSSERKW 442 (884)
T ss_pred cccccccCHHHHHHH-HHHhhhCCCeecCC----CCCcCCChHHHHHHHHHH-HcCcH--hHHhhCcEEeEeCCCCCCCe
Confidence 000111223334 34445655443211 123468999999999987 55543 23345778899999999999
Q ss_pred EEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchh
Q 047874 467 SGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQE 546 (941)
Q Consensus 467 ~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~ 546 (941)
|+++++...++++++++||+||.|+++|+++...+|...+++++.++.+++..++++++|+|++++||+++
T Consensus 443 m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------- 513 (884)
T TIGR01522 443 MAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------- 513 (884)
T ss_pred EEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC---------
Confidence 99999875556688999999999999999887777888889988899999999999999999999999875
Q ss_pred hhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCC
Q 047874 547 KLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLS 626 (941)
Q Consensus 547 ~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~ 626 (941)
+++++|+|+++++||+|++++++|++|+++|++++|+|||+..+|.++|+++|+... ...+++|.+++.++
T Consensus 514 ---~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~------~~~~v~g~~l~~~~ 584 (884)
T TIGR01522 514 ---KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSK------TSQSVSGEKLDAMD 584 (884)
T ss_pred ---CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC------CCceeEhHHhHhCC
Confidence 357999999999999999999999999999999999999999999999999999864 34578999999999
Q ss_pred HHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCch
Q 047874 627 AEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFS 706 (941)
Q Consensus 627 ~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~ 706 (941)
++++.+.+.+..+|||++|+||.++|+.+|++|++|+|+|||.||+||+++||||||||.++++.++++||+++.+|++.
T Consensus 585 ~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~ 664 (884)
T TIGR01522 585 DQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFA 664 (884)
T ss_pred HHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999998679999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCC
Q 047874 707 SVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPP 786 (941)
Q Consensus 707 ~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p 786 (941)
.+.+++++||++++|+++++.|.++.|+..+++.+++.++..+.|++++|++|+|+++|.+|+++|++|+|++++|++||
T Consensus 665 ~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P 744 (884)
T TIGR01522 665 TILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPP 744 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCC
Confidence 99999999999999999999999999999998888888888899999999999999999999999999999999999999
Q ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccccchhHHHHHHHHHHHHHHhhhccCCcccccc-cCccc
Q 047874 787 VGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFK-GIHKN 865 (941)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~-~~~~n 865 (941)
++++++++++.+|..+++++++++++.++++++... .+.....++|++|.+++++|++|.+++|+. +.++|+ ++++|
T Consensus 745 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~n 822 (884)
T TIGR01522 745 RPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQ-DGVITARDTTMTFTCFVFFDMFNALACRSQ-TKSVFEIGFFSN 822 (884)
T ss_pred CCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcchhhHHHHHHHHHHHHHHHHHHHHccC-CccccccCcccC
Confidence 999999999999999999999988776665554321 122234578999999999999999999994 567776 78999
Q ss_pred HHHHHHHHHHHHHHHHHH--HHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhccc
Q 047874 866 KLFLAIIGITIALQLVMV--EFLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922 (941)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~ 922 (941)
++++++++++++++++++ |+++.+|++.|+++.+|+++++++++.+++.|++|++.|
T Consensus 823 ~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~ 881 (884)
T TIGR01522 823 RMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVER 881 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999887765 478999999999999999999999999999999999875
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-131 Score=1219.35 Aligned_cols=877 Identities=26% Similarity=0.367 Sum_probs=740.9
Q ss_pred hhCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhccccc--
Q 047874 16 NLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQV-- 93 (941)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~-- 93 (941)
+-.+.+++++.|++|.++|||++| +++|+++||+|++++++++++|+.++++|++|++++++++++++++......
T Consensus 18 ~~~~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~ 95 (997)
T TIGR01106 18 HKLSLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAST 95 (997)
T ss_pred hhCCHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc
Confidence 455999999999999999999987 9999999999999988888999999999999999999999999776532110
Q ss_pred ---CCcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeee
Q 047874 94 ---GLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIP 170 (941)
Q Consensus 94 ---~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iP 170 (941)
.....|++++.++++++++.+++.++++++++..+++.+. .+.+++|+|||++++|+++||||||+|.+++||+||
T Consensus 96 ~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~-~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IP 174 (997)
T TIGR01106 96 EEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNM-VPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIP 174 (997)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEe
Confidence 1123678888888888888888999999999999988865 467899999999999999999999999999999999
Q ss_pred cceEEEecceEEEeeccCCCCCCceecCCCC---------CeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCC
Q 047874 171 ADGLFLNGHSLKVDESSMTGESDRVEVDEKN---------PFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNE 241 (941)
Q Consensus 171 aD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~---------~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 241 (941)
|||++++|+++.||||+|||||.|+.|.+++ |++|+||.+.+|.+.++|++||.+|.+|++.+.+.+...+
T Consensus 175 aD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 254 (997)
T TIGR01106 175 ADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENG 254 (997)
T ss_pred eeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccC
Confidence 9999999988899999999999999997543 5799999999999999999999999999999988877778
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCc
Q 047874 242 ETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEG 321 (941)
Q Consensus 242 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~ 321 (941)
++|+++.++++..++..+++++++++++++++ .+. .+...+..++++++++|||+
T Consensus 255 ~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----------------------~~~~~~~~~i~v~v~~iP~~ 309 (997)
T TIGR01106 255 KTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---LGY----------------------TWLEAVIFLIGIIVANVPEG 309 (997)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcC----------------------CHHHHHHHHHHHHhhcCCcc
Confidence 89999999999999888877777665554322 221 34567778899999999999
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccc------hhhhhH
Q 047874 322 LPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDAC------SLELAQ 395 (941)
Q Consensus 322 L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~------~~~~~~ 395 (941)
||++++++++.++++|+++|+++|+++++|+||++|++|||||||||+|+|+|.+++.++..+..+.. ......
T Consensus 310 L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (997)
T TIGR01106 310 LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSS 389 (997)
T ss_pred chHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999987654432210 000111
Q ss_pred HHHHHHHHHHhccCccccccCCCC---CCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEE
Q 047874 396 NLYELLQEAVGLNTTGNVYNSNSL---STSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMK 472 (941)
Q Consensus 396 ~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~ 472 (941)
...+.+...+++|+++......+. ......|||+|.|+++++. +.+.+....+..++++..+||+|+||||+++++
T Consensus 390 ~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~-~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~ 468 (997)
T TIGR01106 390 ATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIE-LCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHE 468 (997)
T ss_pred HHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHH-HhCCCHHHHHhhCceeEEeccCCCCceEEEEEe
Confidence 223344456677776554321111 1235679999999999987 444444445567888999999999999999886
Q ss_pred ec--CCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccc----h-
Q 047874 473 RI--NEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQV----Q- 545 (941)
Q Consensus 473 ~~--~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~----~- 545 (941)
.. +++.+++|+|||||.|+++|+++. .+|...+++++.++.+++..++++++|+||+++|||.++.++... .
T Consensus 469 ~~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~ 547 (997)
T TIGR01106 469 NEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDT 547 (997)
T ss_pred ccCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccc
Confidence 43 234688999999999999999776 578888899999999999999999999999999999886543221 1
Q ss_pred --hhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC--------------
Q 047874 546 --EKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVD-------------- 609 (941)
Q Consensus 546 --~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~-------------- 609 (941)
.+..|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.+|.++|+++|+..++..
T Consensus 548 ~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~ 627 (997)
T TIGR01106 548 DDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVS 627 (997)
T ss_pred hhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhcccccc
Confidence 1123889999999999999999999999999999999999999999999999999999754321
Q ss_pred ----CCcccceecchhcccCCHHHHHHhhcCce--EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEE
Q 047874 610 ----LNKDEAVIEGVQFRSLSAEERIAKIESIR--VMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS 683 (941)
Q Consensus 610 ----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 683 (941)
.+....+++|.+++.++++++.+.+.+.. ||||++|+||.++|+.+|+.|++|+|+|||.||+|||++||||||
T Consensus 628 ~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGia 707 (997)
T TIGR01106 628 QVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 707 (997)
T ss_pred ccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCccee
Confidence 01123699999999999999999888764 999999999999999999999999999999999999999999999
Q ss_pred ecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhh
Q 047874 684 MGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLI 763 (941)
Q Consensus 684 m~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 763 (941)
||.+|++.++++||+++.+|+|+.+++++++||++|.|+++++.|.++.|+..+++.+++.++..++|++++|++|+|++
T Consensus 708 mg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli 787 (997)
T TIGR01106 708 MGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLG 787 (997)
T ss_pred cCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHH
Confidence 99779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhcccCCCCCccCCCCCCC-CCCCccHHHHHHH-HHHHHHHHHHHHHHHHHhhc--------ccCC-------
Q 047874 764 MDTLGALALATEQPTNDLMSKPPVGR-SKPLITKIMWRNL-ISQAIYQVAILLTLQFKGRS--------ILGV------- 826 (941)
Q Consensus 764 ~~~~~~~~l~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~------- 826 (941)
+|.+|++++++|+|++++|++||+++ ..+++++.++..+ +..+++++++.++.++.... .++.
T Consensus 788 ~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 867 (997)
T TIGR01106 788 TDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDR 867 (997)
T ss_pred HHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccc
Confidence 99999999999999999999999985 6789988776554 34466665544443322110 0110
Q ss_pred -------c-------------cccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccHHHHHHHHHHHHHHHHH--HH
Q 047874 827 -------K-------------ESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVM--VE 884 (941)
Q Consensus 827 -------~-------------~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~ 884 (941)
. ....+|++|.+++++|++|.++||+. +.++|+..++|++++.++++.+++++++ +|
T Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~-~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p 946 (997)
T TIGR01106 868 WINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTR-RNSVFQQGMKNKILIFGLFEETALAAFLSYCP 946 (997)
T ss_pred cccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccC-cccccccCCcCHHHHHHHHHHHHHHHHHHHhh
Confidence 0 01468999999999999999999994 5677764489999998888888777654 45
Q ss_pred HhhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhcccc
Q 047874 885 FLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPVS 923 (941)
Q Consensus 885 ~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 923 (941)
+++.+|++.++++.+|+++++++++.+++.++.|++.|+
T Consensus 947 ~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~ 985 (997)
T TIGR01106 947 GMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRR 985 (997)
T ss_pred hhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 679999999999999999999999999999999998864
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-130 Score=1196.41 Aligned_cols=855 Identities=34% Similarity=0.509 Sum_probs=732.0
Q ss_pred CCHH--HHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCC
Q 047874 18 GGVN--QVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGL 95 (941)
Q Consensus 18 ~~~~--~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~ 95 (941)
.+++ ++...+.++..+||+++| +.+|+++||+|+++..+..++|..++.||+++++++++++++++++.+......
T Consensus 26 ~~~~~~~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~ 103 (917)
T COG0474 26 LSVERNELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG 103 (917)
T ss_pred cccchhhHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC
Confidence 3566 999999999999999977 999999999999999888899999999999999999999999998876211000
Q ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEE
Q 047874 96 KEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLF 175 (941)
Q Consensus 96 ~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~l 175 (941)
.+...++..++++.+++.++++++++..++++++. +.+++|+|||++++|+++||||||||.+++||+||||++|
T Consensus 104 ----~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rL 178 (917)
T COG0474 104 ----VDAIVILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRL 178 (917)
T ss_pred ----cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEE
Confidence 34456777788889999999999999999998764 6799999999999999999999999999999999999999
Q ss_pred EecceEEEeeccCCCCCCceecC-------------CCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCC
Q 047874 176 LNGHSLKVDESSMTGESDRVEVD-------------EKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEE 242 (941)
Q Consensus 176 l~g~~l~Vdes~LTGEs~pv~k~-------------~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 242 (941)
++++++.||||+|||||.|+.|. ..+|++|+||.+.+|.+.++|++||.+|++|++...+.......
T Consensus 179 l~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~ 258 (917)
T COG0474 179 LESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVK 258 (917)
T ss_pred EEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccC
Confidence 99999999999999999999996 34789999999999999999999999999999999998776789
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCch
Q 047874 243 TPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGL 322 (941)
Q Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L 322 (941)
+|+++.++++..++..+++.++++.+++. ++.+.. .+...+..++++++.++|++|
T Consensus 259 t~l~~~l~~~~~~l~~~~l~~~~~~~~~~---~~~~~~---------------------~~~~~~~~~v~l~va~IPegL 314 (917)
T COG0474 259 TPLQRKLNKLGKFLLVLALVLGALVFVVG---LFRGGN---------------------GLLESFLTALALAVAAVPEGL 314 (917)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcCc---------------------cHHHHHHHHHHHHHhccccch
Confidence 99999999999999998888877777664 222210 256889999999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHH
Q 047874 323 PLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQ 402 (941)
Q Consensus 323 ~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 402 (941)
|+.++++++.++.+|+++++++|+++++|+||++|+||+|||||||+|+|+|++++..+...+.+.......+... .+.
T Consensus 315 p~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~-~~l 393 (917)
T COG0474 315 PAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALL-RFL 393 (917)
T ss_pred HHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHH-HHH
Confidence 9999999999999999999999999999999999999999999999999999999998411111100011111222 334
Q ss_pred HHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCC--CCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEE
Q 047874 403 EAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGM--NVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFH 480 (941)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~--~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~ 480 (941)
..+++||+...... + ++..|||+|.|+++++. +.|. +....+..+++++++||+|+|||||++++..+++ +.
T Consensus 394 ~~~~lc~~~~~~~~---~-~~~~gdptE~Al~~~a~-~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~-~~ 467 (917)
T COG0474 394 LAAALCNSVTPEKN---G-WYQAGDPTEGALVEFAE-KLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGK-YI 467 (917)
T ss_pred HHHHhcCccccccc---C-ceecCCccHHHHHHHHH-hcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCc-EE
Confidence 55667877655432 2 67789999999999998 7776 5555666678899999999999999999854444 89
Q ss_pred EEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEe
Q 047874 481 THWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVG 560 (941)
Q Consensus 481 ~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~ 560 (941)
+++|||||.|+++|++. +...+++++.++.+.+..++++++|+||+++|||..+..+.....+..|+|++|+|+++
T Consensus 468 ~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g 543 (917)
T COG0474 468 LFVKGAPEVILERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTG 543 (917)
T ss_pred EEEcCChHHHHHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhh
Confidence 99999999999999976 66778899999999999999999999999999997765554433367899999999999
Q ss_pred ccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEE
Q 047874 561 LKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 561 ~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 640 (941)
++||||++++++|+.|++|||++||+|||+..||.+||++||+..+... ..+++|.+++.+.++++.+.++++.||
T Consensus 544 ~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~----~~vi~G~el~~l~~~el~~~~~~~~Vf 619 (917)
T COG0474 544 IEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAES----ALVIDGAELDALSDEELAELVEELSVF 619 (917)
T ss_pred ccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCc----eeEeehHHhhhcCHHHHHHHhhhCcEE
Confidence 9999999999999999999999999999999999999999998864210 569999999999999999999999999
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHH
Q 047874 641 ARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYN 720 (941)
Q Consensus 641 ~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~ 720 (941)
||++|+||.++|+.+|++|++|+|+|||.||+||||+||||||||++|+|++|++||+++.++++..+..+++|||++|.
T Consensus 620 ARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ 699 (917)
T COG0474 620 ARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYV 699 (917)
T ss_pred EEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHH
Q 047874 721 NIQKFLQFQLTVNVAALVINFGAAVSSGK-VPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMW 799 (941)
Q Consensus 721 ~i~~~i~~~l~~n~~~~~~~~~~~~~~~~-~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~ 799 (941)
|+++++.|.+++|+..+++.+++.+++.+ .|++++|++|+|++++.+|+++++.++|+.+.|++||+++.++++++..+
T Consensus 700 ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~ 779 (917)
T COG0474 700 NIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIF 779 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHH
Confidence 99999999999999999999988888776 99999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHH-HHHHHhhcccCC-------ccccchhHHHHHHHHHHHHHHhhhccCCcccccc-cCcccHHHHH
Q 047874 800 RNLISQAIYQVAILL-TLQFKGRSILGV-------KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFK-GIHKNKLFLA 870 (941)
Q Consensus 800 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~-------~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~ 870 (941)
..++....++..+++ +.+.+....+.. .....+|++|..++++|.++.+++|+. ..+++. .++.|+.+++
T Consensus 780 ~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~ 858 (917)
T COG0474 780 WRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSR-GRPFLSSLLFSNKYLWL 858 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhcccccCHHHHH
Confidence 885555444433333 222221111111 145578999999999999999999984 456666 5789999999
Q ss_pred HHHHHHHHHHHHH--HHhh-hcccccCCChHHHHHHHHHHHHHH--HHHHHHHh
Q 047874 871 IIGITIALQLVMV--EFLK-TFADTERLNWGQWAACIGIAAMSW--PIGFLIKC 919 (941)
Q Consensus 871 ~~~~~~~~~~~~~--~~~~-~~f~~~~l~~~~~~~~~~~~~~~~--~~~~~~k~ 919 (941)
+++++.+++++.+ +... ..|+..+++...|+.++++..... ...+..+.
T Consensus 859 ~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (917)
T COG0474 859 ALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVALLLLYIVVSELYKL 912 (917)
T ss_pred HHHHHHHHHHHHHHhHHhHhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888777664 3455 689999999888988877774443 33344443
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-126 Score=1158.14 Aligned_cols=828 Identities=23% Similarity=0.320 Sum_probs=696.4
Q ss_pred CCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccc---cC
Q 047874 18 GGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQ---VG 94 (941)
Q Consensus 18 ~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~---~~ 94 (941)
.+.+++++.|+++ .+|||++| +++|+++||+|+++.++++++|+.+++||++|+.++++++++++++.+... .+
T Consensus 30 ~~~~~v~~~l~~~-~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~ 106 (903)
T PRK15122 30 NSLEETLANLNTH-RQGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRG 106 (903)
T ss_pred CCHHHHHHHhCCC-CCCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 4899999999999 58999988 999999999999999888899999999999999999999999999875321 12
Q ss_pred CcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEC------CEEeeeecCCcccCcEEEEcCCCe
Q 047874 95 LKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRD------GRRRGLSIFDVVVGEVVCLKTGDQ 168 (941)
Q Consensus 95 ~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~------g~~~~i~~~~Lv~GDiI~l~~G~~ 168 (941)
....|.+++.++++++++.+++++++++.++..+++.+.. +.+++|+|| |++++|+++||+|||+|.+++||+
T Consensus 107 ~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~ 185 (903)
T PRK15122 107 EETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-RTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDM 185 (903)
T ss_pred ccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCE
Confidence 2236888888888899999999999999999999998664 568999999 488999999999999999999999
Q ss_pred eecceEEEecceEEEeeccCCCCCCceecCC----------------------CCCeEeeccEEeeeeEEEEEEEEcccC
Q 047874 169 IPADGLFLNGHSLKVDESSMTGESDRVEVDE----------------------KNPFLLSGTKVTAGYGFMLVTSVGMST 226 (941)
Q Consensus 169 iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~----------------------~~~~l~aGt~v~~g~~~~~V~~tG~~T 226 (941)
|||||++++|+++.||||+|||||.|+.|.+ .+|++|+||.+.+|.++++|++||.+|
T Consensus 186 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T 265 (903)
T PRK15122 186 IPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265 (903)
T ss_pred EeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEecccc
Confidence 9999999999988999999999999999974 136899999999999999999999999
Q ss_pred hhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHH
Q 047874 227 AWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINI 306 (941)
Q Consensus 227 ~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (941)
++||+.+.+.+ ...++|+++.++++..++..+++.++.+++++.. .... ++...
T Consensus 266 ~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~---~~~~----------------------~~~~~ 319 (903)
T PRK15122 266 YFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLING---FTKG----------------------DWLEA 319 (903)
T ss_pred HhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh---hccC----------------------CHHHH
Confidence 99999998876 5667999999999998887766655544433321 1110 45677
Q ss_pred HHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCccccc
Q 047874 307 IAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKS 386 (941)
Q Consensus 307 ~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~ 386 (941)
+.+++++++.+|||+||++++++++.++.+|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+++..+.. .
T Consensus 320 l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~-~- 397 (903)
T PRK15122 320 LLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR-K- 397 (903)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-C-
Confidence 88899999999999999999999999999999999999999999999999999999999999999999998743221 0
Q ss_pred ccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCc
Q 047874 387 DACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKR 466 (941)
Q Consensus 387 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~ 466 (941)
.+ +.+..+. +|+.. ....+||+|.|+++++. +.+.+ .....++.+.++||++.+|+
T Consensus 398 -------~~---~~l~~a~-l~s~~----------~~~~~~p~e~All~~a~-~~~~~--~~~~~~~~~~~~pF~s~~k~ 453 (903)
T PRK15122 398 -------DE---RVLQLAW-LNSFH----------QSGMKNLMDQAVVAFAE-GNPEI--VKPAGYRKVDELPFDFVRRR 453 (903)
T ss_pred -------hH---HHHHHHH-HhCCC----------CCCCCChHHHHHHHHHH-HcCch--hhhhcCceEEEeeeCCCcCE
Confidence 01 2232222 22211 01268999999999987 44432 12345678899999999999
Q ss_pred EEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeecccccccc-ch
Q 047874 467 SGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQ-VQ 545 (941)
Q Consensus 467 ~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~-~~ 545 (941)
|+++++..++ ++++++||+||.++++|++... +|...+++++.++++.+..++++.+|+|++++||++++..+.. ..
T Consensus 454 ms~v~~~~~~-~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~ 531 (903)
T PRK15122 454 LSVVVEDAQG-QHLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQY 531 (903)
T ss_pred EEEEEEcCCC-cEEEEECCcHHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccccccc
Confidence 9999876444 4779999999999999997653 6677788998899999999999999999999999987553221 11
Q ss_pred hhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccC
Q 047874 546 EKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSL 625 (941)
Q Consensus 546 ~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~ 625 (941)
.+..|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||.. ..+++|.+++.+
T Consensus 532 ~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--------~~vi~G~el~~~ 603 (903)
T PRK15122 532 STADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--------GEPLLGTEIEAM 603 (903)
T ss_pred ccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--------CCccchHhhhhC
Confidence 223578999999999999999999999999999999999999999999999999999963 358999999999
Q ss_pred CHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCc
Q 047874 626 SAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNF 705 (941)
Q Consensus 626 ~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~ 705 (941)
+++++.+..++..+|||++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||| +|+|+||++||+++.+|+|
T Consensus 604 ~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f 682 (903)
T PRK15122 604 DDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSL 682 (903)
T ss_pred CHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCCh
Confidence 999999999999999999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCC
Q 047874 706 SSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKP 785 (941)
Q Consensus 706 ~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 785 (941)
+.+++++++||++|+|+++++.|.++.|+..++..++..++..+.|++|.|++|+|+++|. |+++++.|+|++++| +|
T Consensus 683 ~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~ 760 (903)
T PRK15122 683 MVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RK 760 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CC
Confidence 9999999999999999999999999999988887777777766789999999999999995 899999999999999 99
Q ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcc--ccchhHHHHHHHHHHHHHHhhhccCCcccccccCc
Q 047874 786 PVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKE--SVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIH 863 (941)
Q Consensus 786 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~ 863 (941)
|++++.+++++.++...+..+++....+++ +++... .+... ...+|..|.+++++|+++.+++|+. +.++|
T Consensus 761 P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~t~~f~~l~~~q~~~~~~~R~~-~~~~~---- 833 (903)
T PRK15122 761 PRKWDAKNIGRFMLWIGPTSSIFDITTFAL-MWFVFA-ANSVEMQALFQSGWFIEGLLSQTLVVHMLRTQ-KIPFI---- 833 (903)
T ss_pred CCCCChhhhHHHHHHHHHHHHHHHHHHHHH-HHHHhc-cCcHhhhhhhHHHHHHHHHHHHHHHHHhhCcC-CCCcC----
Confidence 999999999997775444433333332222 222111 11111 1345788999999999999999984 33444
Q ss_pred ccHHHHHHHHHHHHHHHHH--HHH--hhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhcc
Q 047874 864 KNKLFLAIIGITIALQLVM--VEF--LKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIP 921 (941)
Q Consensus 864 ~n~~~~~~~~~~~~~~~~~--~~~--~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~ 921 (941)
+|++.+.+++++++++++. +++ ++.+|++.|+++.+|++++++++..+++.|+.|.+.
T Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~ 895 (903)
T PRK15122 834 QSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKRFY 895 (903)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555443 454 789999999999999999999999999999888543
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-125 Score=1150.64 Aligned_cols=824 Identities=23% Similarity=0.316 Sum_probs=685.1
Q ss_pred hhHHhhhC--CHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhh
Q 047874 11 FESLSNLG--GVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGF 88 (941)
Q Consensus 11 ~~~~~~~~--~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~ 88 (941)
-+.+.++. +.+++++.|+++. +|||++| +++|+++||+|+++.++++++|+.++++|++|++++++++++++++.
T Consensus 43 ~~~~~~~~~~~~~~v~~~l~~~~-~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~ 119 (902)
T PRK10517 43 SARCLKAAVMPEEELWKTFDTHP-EGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYAT 119 (902)
T ss_pred HHHHHHHHcCCHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 33444444 8999999999986 6999987 99999999999999998889999999999999999999999999887
Q ss_pred cccccCCcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEC------CEEeeeecCCcccCcEEE
Q 047874 89 GIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRD------GRRRGLSIFDVVVGEVVC 162 (941)
Q Consensus 89 ~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~------g~~~~i~~~~Lv~GDiI~ 162 (941)
+ .|.++..++++++++.+++.++++++++..++|.+.. +.+++|+|| |++++|+++||||||+|.
T Consensus 120 ~--------~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~-~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~ 190 (902)
T PRK10517 120 E--------DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMV-SNTATVLRVINDKGENGWLEIPIDQLVPGDIIK 190 (902)
T ss_pred c--------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCccCCCCeEEEEEHHhCCCCCEEE
Confidence 5 6888888888888999999999999999999998764 568999999 789999999999999999
Q ss_pred EcCCCeeecceEEEecceEEEeeccCCCCCCceecCCCC------------CeEeeccEEeeeeEEEEEEEEcccChhhH
Q 047874 163 LKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKN------------PFLLSGTKVTAGYGFMLVTSVGMSTAWGE 230 (941)
Q Consensus 163 l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~------------~~l~aGt~v~~g~~~~~V~~tG~~T~~g~ 230 (941)
+++||+|||||+|++|+++.||||+|||||.|+.|.+++ |++|+||.+.+|.+.++|++||.+|++|+
T Consensus 191 l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~Gk 270 (902)
T PRK10517 191 LAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQ 270 (902)
T ss_pred ECCCCEEeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHH
Confidence 999999999999999998899999999999999997543 57999999999999999999999999999
Q ss_pred HHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHH
Q 047874 231 MMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAA 310 (941)
Q Consensus 231 i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (941)
+.+.+.++..+++|+++.++++++++..+++.++.++++++. +.+. ++...+..+
T Consensus 271 I~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~---~~~~----------------------~~~~~l~~a 325 (902)
T PRK10517 271 LAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLING---YTKG----------------------DWWEAALFA 325 (902)
T ss_pred HHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH---HhcC----------------------CHHHHHHHH
Confidence 999998888889999999999999988877776665554422 1110 355678889
Q ss_pred HHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccch
Q 047874 311 VTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACS 390 (941)
Q Consensus 311 i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~ 390 (941)
+++++.+|||+||++++++++.++.+|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+++.... .+
T Consensus 326 lsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~---~~--- 399 (902)
T PRK10517 326 LSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISG---KT--- 399 (902)
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCC---CC---
Confidence 999999999999999999999999999999999999999999999999999999999999999998742111 00
Q ss_pred hhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEE
Q 047874 391 LELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVL 470 (941)
Q Consensus 391 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~svi 470 (941)
. .+.+..+. +|+... ...+||+|.|+++++. ..+ .....+.++.+.++||+|++|+|+++
T Consensus 400 ---~---~~ll~~a~-l~~~~~----------~~~~~p~d~All~~a~-~~~--~~~~~~~~~~~~~~pFds~~k~msvv 459 (902)
T PRK10517 400 ---S---ERVLHSAW-LNSHYQ----------TGLKNLLDTAVLEGVD-EES--ARSLASRWQKIDEIPFDFERRRMSVV 459 (902)
T ss_pred ---H---HHHHHHHH-hcCCcC----------CCCCCHHHHHHHHHHH-hcc--hhhhhhcCceEEEeeeCCCcceEEEE
Confidence 0 12233222 232210 1258999999999886 322 11223456778899999999999999
Q ss_pred EEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhc
Q 047874 471 MKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEE 550 (941)
Q Consensus 471 v~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e 550 (941)
++..++ .+.+++||+||.++++|++... +|...+++++.++.+.+..++++++|+|++++||++++..+.. .....|
T Consensus 460 v~~~~~-~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~-~~~~~e 536 (902)
T PRK10517 460 VAENTE-HHQLICKGALEEILNVCSQVRH-NGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGD-YQRADE 536 (902)
T ss_pred EEECCC-eEEEEEeCchHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccc-cccccc
Confidence 876444 4678999999999999997754 5667788988888999999999999999999999987553321 112237
Q ss_pred cCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHH
Q 047874 551 TGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEER 630 (941)
Q Consensus 551 ~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~ 630 (941)
+|++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++||.. ..+++|.+++.++++++
T Consensus 537 ~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--------~~v~~G~el~~l~~~el 608 (902)
T PRK10517 537 SDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--------GEVLIGSDIETLSDDEL 608 (902)
T ss_pred cCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--------cCceeHHHHHhCCHHHH
Confidence 8999999999999999999999999999999999999999999999999999953 36899999999999999
Q ss_pred HHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHH
Q 047874 631 IAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVT 710 (941)
Q Consensus 631 ~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~ 710 (941)
.+.+++..+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||| +|+|+||++||+++.++++..+++
T Consensus 609 ~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ 687 (902)
T PRK10517 609 ANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEE 687 (902)
T ss_pred HHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCC
Q 047874 711 VLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRS 790 (941)
Q Consensus 711 ~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~ 790 (941)
++++||++|+|++|++.|.++.|+..++..+++.++..+.|++|.|++|+|+++| +|++++++|+|++++|++||+. +
T Consensus 688 ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r~-~ 765 (902)
T PRK10517 688 GVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQRW-N 765 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCCC-C
Confidence 9999999999999999999999999888888777776568999999999999999 6899999999999999999872 3
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCc-c---ccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccH
Q 047874 791 KPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVK-E---SVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNK 866 (941)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~ 866 (941)
...+ .+.+...+.+.+++.+..++.....++.. . ...++..|..++++|+++.+++|+. +.+ +|+|+
T Consensus 766 ~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~~-~~~----~~~~~ 836 (902)
T PRK10517 766 PADL----GRFMVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTR-RIP----FIQSR 836 (902)
T ss_pred HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHHhhccC-CCC----cccch
Confidence 2223 33333334433322222121111111211 1 1244566999999999999999984 233 44677
Q ss_pred HHHHHHHHHHHHHHHH--HH--HhhhcccccCCC--hHHHHHHHHHHHHHHHHHHHHHhccc
Q 047874 867 LFLAIIGITIALQLVM--VE--FLKTFADTERLN--WGQWAACIGIAAMSWPIGFLIKCIPV 922 (941)
Q Consensus 867 ~~~~~~~~~~~~~~~~--~~--~~~~~f~~~~l~--~~~~~~~~~~~~~~~~~~~~~k~~~~ 922 (941)
+.+.+++.+++++++. +| +++.+|++.+++ +..|++++++++. ++.|+.|.+..
T Consensus 837 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~ 896 (902)
T PRK10517 837 AAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYS 896 (902)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 7776666666655443 44 578899999999 5667666666655 56777776543
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-125 Score=1146.83 Aligned_cols=827 Identities=24% Similarity=0.325 Sum_probs=688.5
Q ss_pred ccCChhHHhhh--CCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHH
Q 047874 7 KEKSFESLSNL--GGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALL 84 (941)
Q Consensus 7 ~~~~~~~~~~~--~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~l 84 (941)
+.|+++.+.+. .++|++++.|+++. +|||++| +++|+++||+|+++.++++++|+.++++|++|+++++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~l 81 (867)
T TIGR01524 5 VKKQGNNLLKESQMGKETLLRKLGVHE-TGLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGV 81 (867)
T ss_pred CchHHHHHHHHHhCCHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34444455443 38999999999985 7999987 9999999999999998888999999999999999999999999
Q ss_pred HhhhcccccCCcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEE------CCEEeeeecCCcccC
Q 047874 85 SLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVR------DGRRRGLSIFDVVVG 158 (941)
Q Consensus 85 s~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R------~g~~~~i~~~~Lv~G 158 (941)
+++.+ .|++++.++++++++.+++.+++++.++..+++.+.. +.+++|+| ||++++|+++||+||
T Consensus 82 s~~~~--------~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~-~~~~~V~R~~~~~~dg~~~~I~~~eLv~G 152 (867)
T TIGR01524 82 SYLTD--------DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMV-KNTATVLRVINENGNGSMDEVPIDALVPG 152 (867)
T ss_pred HHHHh--------hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCeeEEEEecccCCCCeEEEEEhhcCCCC
Confidence 98775 6888888888888999999999999999999998654 46899999 999999999999999
Q ss_pred cEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCCC------------CeEeeccEEeeeeEEEEEEEEcccC
Q 047874 159 EVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKN------------PFLLSGTKVTAGYGFMLVTSVGMST 226 (941)
Q Consensus 159 DiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~------------~~l~aGt~v~~g~~~~~V~~tG~~T 226 (941)
|+|.+++||+|||||++++|+++.||||+|||||.|+.|.+++ |++|+||.+.+|.++++|++||.+|
T Consensus 153 DiV~l~~Gd~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T 232 (867)
T TIGR01524 153 DLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSST 232 (867)
T ss_pred CEEEECCCCEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCcc
Confidence 9999999999999999999998899999999999999998643 5799999999999999999999999
Q ss_pred hhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHH
Q 047874 227 AWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINI 306 (941)
Q Consensus 227 ~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (941)
++||+.+.+.+ ..+++|+++.++++++++..+++.++.++++++. +.+. ++...
T Consensus 233 ~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~---~~~~----------------------~~~~~ 286 (867)
T TIGR01524 233 WFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMING---LMKG----------------------DWLEA 286 (867)
T ss_pred HHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHH---HhcC----------------------CHHHH
Confidence 99999999877 6678999999999999998887777666554432 1110 35567
Q ss_pred HHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCccccc
Q 047874 307 IAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKS 386 (941)
Q Consensus 307 ~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~ 386 (941)
+..++++++.+|||+||++++++++.++++|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+++..... .
T Consensus 287 ~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~-~- 364 (867)
T TIGR01524 287 FLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE-T- 364 (867)
T ss_pred HHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC-C-
Confidence 88899999999999999999999999999999999999999999999999999999999999999999997632210 0
Q ss_pred ccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCc
Q 047874 387 DACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKR 466 (941)
Q Consensus 387 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~ 466 (941)
..+.+..+ ++|+.. + ..++||+|.|+++++. +.. ....+..++..+.+||+|++|+
T Consensus 365 ----------~~~~l~~a-~l~~~~-----~-----~~~~~p~~~Al~~~~~-~~~--~~~~~~~~~~~~~~pF~s~~k~ 420 (867)
T TIGR01524 365 ----------SERVLKMA-WLNSYF-----Q-----TGWKNVLDHAVLAKLD-ESA--ARQTASRWKKVDEIPFDFDRRR 420 (867)
T ss_pred ----------HHHHHHHH-HHhCCC-----C-----CCCCChHHHHHHHHHH-hhc--hhhHhhcCceEEEeccCCCcCE
Confidence 11223222 223211 0 1256999999999887 321 1222345678889999999999
Q ss_pred EEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchh
Q 047874 467 SGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQE 546 (941)
Q Consensus 467 ~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~ 546 (941)
|++++++.++ .+++++||+||.++++|+++.. +|...+++++.++++++..++++++|+|++++|||+++..+.+ ..
T Consensus 421 ms~~v~~~~~-~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~-~~ 497 (867)
T TIGR01524 421 LSVVVENRAE-VTRLICKGAVEEMLTVCTHKRF-GGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD-FT 497 (867)
T ss_pred EEEEEEcCCc-eEEEEEeCcHHHHHHhchhhhc-CCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc-cc
Confidence 9999876443 4678999999999999987654 6677788888888999999999999999999999987654322 11
Q ss_pred hhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCC
Q 047874 547 KLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLS 626 (941)
Q Consensus 547 ~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~ 626 (941)
...|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.+|.++|+++||.. ..+++|.+++.++
T Consensus 498 ~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--------~~v~~g~~l~~~~ 569 (867)
T TIGR01524 498 KTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--------NDFLLGADIEELS 569 (867)
T ss_pred ccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--------CCeeecHhhhhCC
Confidence 12378999999999999999999999999999999999999999999999999999964 3589999999999
Q ss_pred HHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCch
Q 047874 627 AEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFS 706 (941)
Q Consensus 627 ~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~ 706 (941)
++++.+..++..+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||| +|+|+||++||+++.+++|+
T Consensus 570 ~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~ 648 (867)
T TIGR01524 570 DEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLM 648 (867)
T ss_pred HHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChH
Confidence 99999999999999999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCC
Q 047874 707 SVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPP 786 (941)
Q Consensus 707 ~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p 786 (941)
.+++++++||++|+|+++++.|.++.|+..++..+++.++..+.|++|+|++|+|+++| +|++++++|+|++++|++||
T Consensus 649 ~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~ 727 (867)
T TIGR01524 649 VLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPH 727 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCC
Confidence 99999999999999999999999999999888877777776678999999999999999 79999999999999998666
Q ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHH---HHHHHHhhcccCC-ccccchhHHHHHHHHHHHHHHhhhccCCcccccccC
Q 047874 787 VGRSKPLITKIMWRNLISQAIYQVAIL---LTLQFKGRSILGV-KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGI 862 (941)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~ 862 (941)
+ ++++.+.+. +...+++.+++. +.+++......+. .....+|..|.+++++|+++.+++|+. +.+ +
T Consensus 728 ~-~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~-~~~----~ 797 (867)
T TIGR01524 728 Q-WEQKGMGRF----MLCIGPVSSIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMIRTE-KIP----F 797 (867)
T ss_pred C-CChhhHHHH----HHHHHHHHHHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhhCcC-CCC----c
Confidence 5 666444333 333444332222 2121111100000 122347889999999999999999984 233 4
Q ss_pred cccHHHHHHHHHHHHHHHHHH--HH--hhhcccccCCCh--HHHHHHHHHHHHHHHHHHHHHhccc
Q 047874 863 HKNKLFLAIIGITIALQLVMV--EF--LKTFADTERLNW--GQWAACIGIAAMSWPIGFLIKCIPV 922 (941)
Q Consensus 863 ~~n~~~~~~~~~~~~~~~~~~--~~--~~~~f~~~~l~~--~~~~~~~~~~~~~~~~~~~~k~~~~ 922 (941)
|+|++.+.+++++++++++.+ ++ ++.+|++.++|+ ..|++++++++. ++.|+.|++..
T Consensus 798 ~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~~ 861 (867)
T TIGR01524 798 IQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFYI 861 (867)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 568888888887777776554 33 378999998854 566666665554 66788886543
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-125 Score=1156.30 Aligned_cols=834 Identities=31% Similarity=0.458 Sum_probs=711.7
Q ss_pred HHHHhhHHHHHHHHHHHHHHhhhcccccCC--cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEE
Q 047874 66 VFEAFKDTTIIILLVCALLSLGFGIKQVGL--KEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVR 143 (941)
Q Consensus 66 l~~~f~~~~~~~lli~~~ls~~~~~~~~~~--~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R 143 (941)
+++||++|++++|++++++|+++++.+.+. ...|+++..++++++++.+++.++++++++..+++.+. .+.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~-~~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEY-ESEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEE
Confidence 478999999999999999999987654222 24799999999999999999999999999999999865 567899999
Q ss_pred CCEEeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCC------------CCeEeeccEEe
Q 047874 144 DGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEK------------NPFLLSGTKVT 211 (941)
Q Consensus 144 ~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~------------~~~l~aGt~v~ 211 (941)
||++++|+++||||||+|.+++||+|||||++++|+++.||||+|||||.|+.|.++ ++++|+||.+.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998789999999999999999753 37899999999
Q ss_pred eeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccC
Q 047874 212 AGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVG 291 (941)
Q Consensus 212 ~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (941)
+|++.++|++||.+|++||+.+++...+.+++|+++++++++.++..+.++++++++++++.++. .... ..
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~-~~~~----~~---- 230 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFN-DPAL----GG---- 230 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccc----cc----
Confidence 99999999999999999999999988888899999999999999888777766665554332221 1000 00
Q ss_pred CccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCc
Q 047874 292 GKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQ 371 (941)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~ 371 (941)
++...+...+..++++++++||++||++++++++.++++|+++++++|+++++|+||++|++|||||||||+|+
T Consensus 231 ------~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~ 304 (917)
T TIGR01116 231 ------GWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQ 304 (917)
T ss_pred ------hhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCe
Confidence 11124556677788999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCcc-------------cccccch-h------hhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHH
Q 047874 372 MKVTEFWLGKEA-------------MKSDACS-L------ELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEK 431 (941)
Q Consensus 372 ~~v~~~~~~~~~-------------~~~~~~~-~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~ 431 (941)
|+|.+++..+.. +.+.... . ...+...+.+..+.++|+++.....+........|||+|.
T Consensus 305 m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ 384 (917)
T TIGR01116 305 MSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEA 384 (917)
T ss_pred EEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHH
Confidence 999999876521 1110000 0 0011223445556678887665432222223346899999
Q ss_pred HHHHHHHHhcCCCCcCc----------------ccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcc
Q 047874 432 AILSWAMIDLGMNVDEP----------------KQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCS 495 (941)
Q Consensus 432 al~~~~~~~~~~~~~~~----------------~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~ 495 (941)
|+++++. +.|.+.... ++.+++++++||+|+||||+++++.. +++.+|+|||||.|+++|+
T Consensus 385 ALl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~--~~~~~~~KGApe~il~~c~ 461 (917)
T TIGR01116 385 ALKVLVE-KMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS--TGNKLFVKGAPEGVLERCT 461 (917)
T ss_pred HHHHHHH-HcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC--CcEEEEEcCChHHHHHhcc
Confidence 9999998 777654321 34567899999999999999999864 3478999999999999999
Q ss_pred cccccCCeEeeCCHHHHHHHHHHHHHHHh-cccceeeeeeeccccccc------cchhhhhccCcEEEEEEeccCCCCcc
Q 047874 496 HYYVKSGTIRILDGEERTQIEKIIQEMAA-KSLRCIAFAHTKAAEADG------QVQEKLEETGLTLLGLVGLKDPCRPG 568 (941)
Q Consensus 496 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~-~g~r~l~~a~~~~~~~~~------~~~~~~~e~~l~~lG~i~~~d~~~~~ 568 (941)
+++.++|...+++++.++++++..+++++ +|+||+++|||.++.+.. ....+..|+|++|+|+++++||+|++
T Consensus 462 ~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~ 541 (917)
T TIGR01116 462 HILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPE 541 (917)
T ss_pred ceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchh
Confidence 88877788889999999999999999999 999999999998764321 11124468999999999999999999
Q ss_pred hHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHH
Q 047874 569 VRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDK 648 (941)
Q Consensus 569 ~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 648 (941)
++++|++|+++||+++|+|||+..+|.++|+++|+..++.. .....++|.+++.+.+++......+..||||++|+||
T Consensus 542 v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~--v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K 619 (917)
T TIGR01116 542 VADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDED--VTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHK 619 (917)
T ss_pred HHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcc--ccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHH
Confidence 99999999999999999999999999999999999764321 1235789999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHH
Q 047874 649 LLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQF 728 (941)
Q Consensus 649 ~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 728 (941)
.++|+.+|+.|++|+|+|||.||+|||++|||||||| +|++.++++||+++.+|+|..+.+++++||++|+|+++++.|
T Consensus 620 ~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~ 698 (917)
T TIGR01116 620 SELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRY 698 (917)
T ss_pred HHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHH
Q 047874 729 QLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIY 808 (941)
Q Consensus 729 ~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 808 (941)
.+++|+..+++.+++.+++.+.|++++|++|+|++++.+|+++++.++|++++|++||+.++++++++.++..+++.+++
T Consensus 699 ~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~ 778 (917)
T TIGR01116 699 MISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVY 778 (917)
T ss_pred HHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHH
Confidence 99999999999999888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCC-----------------------ccccchhHHHHHHHHHHHHHHhhhccCCcccccc-cCcc
Q 047874 809 QVAILLTLQFKGRSILGV-----------------------KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFK-GIHK 864 (941)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~-----------------------~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~-~~~~ 864 (941)
++++.++.+++.....+. ....++|++|.+++++|++|.+++|+. +.++|+ ++|+
T Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~ 857 (917)
T TIGR01116 779 VGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSE-DQSLLRMPPWV 857 (917)
T ss_pred HHHHHHHHHHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCC-cccccccCCcc
Confidence 887654433321110010 134578999999999999999999995 567776 7899
Q ss_pred cHHHHHHHHHHHHHHHHH--HHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhccc
Q 047874 865 NKLFLAIIGITIALQLVM--VEFLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922 (941)
Q Consensus 865 n~~~~~~~~~~~~~~~~~--~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~ 922 (941)
|+++++++++++++++++ +++++.+|++.|+++.+|+++++++++.+++.|++|++.|
T Consensus 858 n~~~~~~~~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 858 NKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred CHHHHHHHHHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999988877 6778999999999999999999999999999999998763
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-120 Score=1003.08 Aligned_cols=876 Identities=26% Similarity=0.391 Sum_probs=744.2
Q ss_pred hhCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhccccc--
Q 047874 16 NLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQV-- 93 (941)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~-- 93 (941)
|.-+++|+++++++|..+|||..+ +.+++++-|+|.+++++..+-|..+.+|+.+.+.++++++++++++.+....
T Consensus 40 H~~~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~ 117 (1019)
T KOG0203|consen 40 HKLSVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQAST 117 (1019)
T ss_pred ccCCHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccc
Confidence 456999999999999999999977 9999999999999999888889989999999999999999999976543211
Q ss_pred ---CCcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeee
Q 047874 94 ---GLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIP 170 (941)
Q Consensus 94 ---~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iP 170 (941)
....+.+-+..+...+++..+.+.+++.+..+-.+..+++ .+..++|+|||+.+.+..+|||+||++.++-||+||
T Consensus 118 ~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l-~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVP 196 (1019)
T KOG0203|consen 118 EDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNL-VPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVP 196 (1019)
T ss_pred CCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhcc-chhhheeeecceeEEechhhcccccceeeccCCccc
Confidence 1112233333222233333344455555555555666654 467899999999999999999999999999999999
Q ss_pred cceEEEecceEEEeeccCCCCCCceecCC---------CCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCC
Q 047874 171 ADGLFLNGHSLKVDESSMTGESDRVEVDE---------KNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNE 241 (941)
Q Consensus 171 aD~~ll~g~~l~Vdes~LTGEs~pv~k~~---------~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 241 (941)
||.|++++.++++|+|+|||||+|.++.+ ..|+-|.+|.+.+|.++++|++||.+|.+|++..........
T Consensus 197 ADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~ 276 (1019)
T KOG0203|consen 197 ADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDG 276 (1019)
T ss_pred ceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCC
Confidence 99999999999999999999999998763 457899999999999999999999999999999988887889
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCc
Q 047874 242 ETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEG 321 (941)
Q Consensus 242 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~ 321 (941)
++|.++.++++..++...+++..+.+|++.+. .+. .+..++.+.++++++.+|++
T Consensus 277 ~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~---~gy----------------------~~l~avv~~i~iivAnvPeG 331 (1019)
T KOG0203|consen 277 KTPIAKEIEHFIHIITGVAIFLGISFFILALI---LGY----------------------EWLRAVVFLIGIIVANVPEG 331 (1019)
T ss_pred CCcchhhhhchHHHHHHHHHHHHHHHHHHHHh---hcc----------------------hhHHHhhhhheeEEecCcCC
Confidence 99999999999999988888888877766432 121 46677777899999999999
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccc------hhhhhH
Q 047874 322 LPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDAC------SLELAQ 395 (941)
Q Consensus 322 L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~------~~~~~~ 395 (941)
|+..++.++....+||+++++++||+++.|+||+.++||+|||||||+|+|+|.++|.++.....+.. .....+
T Consensus 332 L~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~ 411 (1019)
T KOG0203|consen 332 LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSS 411 (1019)
T ss_pred ccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccC
Confidence 99999999999999999999999999999999999999999999999999999999998765443321 111223
Q ss_pred HHHHHHHHHHhccCccccccCCCCC---CccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEE
Q 047874 396 NLYELLQEAVGLNTTGNVYNSNSLS---TSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMK 472 (941)
Q Consensus 396 ~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~ 472 (941)
..+..+..+..+|+.+.....+..- .....|++.|.||++++..-++ +....++.++.+.++||+|.+|+.-.+.+
T Consensus 412 ~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~-~~~~~R~~~~kv~eipfNSt~Kyqlsih~ 490 (1019)
T KOG0203|consen 412 ATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILG-SVMELRERNPKVAEIPFNSTNKYQLSIHE 490 (1019)
T ss_pred chHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcc-hHHHHHHhhHHhhcCCcccccceEEEEEe
Confidence 4556677788889888776433322 3456899999999999974333 33556777888999999999999988876
Q ss_pred ecC--CceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccch-----
Q 047874 473 RIN--EKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQ----- 545 (941)
Q Consensus 473 ~~~--~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~----- 545 (941)
..+ +.++.+.+|||||.++++|+.+.. +|+..+++++.++.+++...++...|.||++|+++.++++.....
T Consensus 491 ~~d~~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~ 569 (1019)
T KOG0203|consen 491 TEDPSDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDT 569 (1019)
T ss_pred cCCCCCccceeeecCChHHHHhhccceee-cCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeec
Confidence 543 346788899999999999998776 888899999999999999999999999999999998876544332
Q ss_pred --hhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC-------------
Q 047874 546 --EKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL------------- 610 (941)
Q Consensus 546 --~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~------------- 610 (941)
.+..-.|+.|+|++++-||+|..+++++.+||.||||++|+|||++.||+++|++.||.......
T Consensus 570 d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~ 649 (1019)
T KOG0203|consen 570 DDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVE 649 (1019)
T ss_pred CCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCccc
Confidence 22335689999999999999999999999999999999999999999999999999987643311
Q ss_pred -----CcccceecchhcccCCHHHHHHhhcCce--EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEE
Q 047874 611 -----NKDEAVIEGVQFRSLSAEERIAKIESIR--VMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS 683 (941)
Q Consensus 611 -----~~~~~~~~g~~~~~~~~~~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 683 (941)
.....|++|.++.+++++++++.+.+.. ||||.||+||..||+..|++|..|+++|||.||+||||.||||||
T Consensus 650 ~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVA 729 (1019)
T KOG0203|consen 650 QVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 729 (1019)
T ss_pred ccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhccccccee
Confidence 2356789999999999999999988764 999999999999999999999999999999999999999999999
Q ss_pred ecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhh
Q 047874 684 MGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLI 763 (941)
Q Consensus 684 m~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 763 (941)
||..|+|++|++||++++||+|++|+..++|||.+|+|+||.+.|.++.|+..+...+++.+++.|.|+.++++|.+++.
T Consensus 730 MGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLg 809 (1019)
T KOG0203|consen 730 MGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLG 809 (1019)
T ss_pred eccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhcccCCCCCccCCCCCC-CCCCCccHHHHH-HHHHHHHHHHHHHHHHHHHhhcccCC---------------
Q 047874 764 MDTLGALALATEQPTNDLMSKPPVG-RSKPLITKIMWR-NLISQAIYQVAILLTLQFKGRSILGV--------------- 826 (941)
Q Consensus 764 ~~~~~~~~l~~~~~~~~~~~~~p~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 826 (941)
+|+.|+++|++|+|+.|+|+|+|++ +++++++.+++. .+...+.++++..|+.||..+..-|.
T Consensus 810 TDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~ 889 (1019)
T KOG0203|consen 810 TDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDD 889 (1019)
T ss_pred cccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhh
Confidence 9999999999999999999999998 678888876544 44455777777766655443321111
Q ss_pred -----------c---------cccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccHHHHHHHHHHHHHHHHH--HH
Q 047874 827 -----------K---------ESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVM--VE 884 (941)
Q Consensus 827 -----------~---------~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~ 884 (941)
. +.+.+|..|.+++++|+.+++.|++ ++.++|..-++||.+++++++..++..++ +|
T Consensus 890 ~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KT-RRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~p 968 (1019)
T KOG0203|consen 890 GVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKT-RRNSIFQQGMRNKVLIFAVIFETCLACFLCYCP 968 (1019)
T ss_pred hhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhc-chhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCc
Confidence 0 4567899999999999999999998 57888886699999999998766665554 45
Q ss_pred HhhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhccc
Q 047874 885 FLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922 (941)
Q Consensus 885 ~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~ 922 (941)
.....|++.|++|.+|+..++.++.+++.+|++|++.|
T Consensus 969 g~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR 1006 (1019)
T KOG0203|consen 969 GVLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIR 1006 (1019)
T ss_pred cHHHHhccCCCCcEEEEecccceeeeeeHHHHHhHhhh
Confidence 66788999999999999999999999999999999887
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-114 Score=1038.03 Aligned_cols=744 Identities=24% Similarity=0.370 Sum_probs=626.2
Q ss_pred CCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcCccchhHHHHHHHHHHH
Q 047874 34 GIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVV 113 (941)
Q Consensus 34 GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 113 (941)
|||++| +++|+++||+|++++++ +++|+.++++|++|++++++++++++++.+ .|.++..+++.++++.
T Consensus 1 GLs~~e--a~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~ 69 (755)
T TIGR01647 1 GLTSAE--AKKRLAKYGPNELPEKK-VSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNA 69 (755)
T ss_pred CcCHHH--HHHHHHhcCCCCCCCCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHH
Confidence 899888 99999999999999854 567899999999999999999999999886 6888888888888889
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCC
Q 047874 114 SVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESD 193 (941)
Q Consensus 114 ~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~ 193 (941)
.+++++++++++..+++.+. .+.+++|+|||++++|+++||+|||+|.+++||+|||||++++|+++.||||+|||||.
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~-~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQS-LAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCcc
Confidence 99999999999999999765 46789999999999999999999999999999999999999999877999999999999
Q ss_pred ceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 194 RVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLI 273 (941)
Q Consensus 194 pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (941)
|+.|..+ +.+|+||.+.+|.+.++|++||.+|++|++.+.+.+++.+++|+++.+++++.++.++++.++++.+++++.
T Consensus 149 PV~K~~~-~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~ 227 (755)
T TIGR01647 149 PVTKKTG-DIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFF 227 (755)
T ss_pred ceEeccC-CeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999875 569999999999999999999999999999999988887889999999999999988877777666555322
Q ss_pred HHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhc
Q 047874 274 RYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETM 353 (941)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~L 353 (941)
. .+. ++...+.+++++++++|||+||++++++++.++++|+|+|+++|+++++|+|
T Consensus 228 ~--~~~----------------------~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~l 283 (755)
T TIGR01647 228 G--RGE----------------------SFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEEL 283 (755)
T ss_pred H--cCC----------------------CHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhc
Confidence 0 111 4567788999999999999999999999999999999999999999999999
Q ss_pred cCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHH
Q 047874 354 GSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAI 433 (941)
Q Consensus 354 g~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al 433 (941)
|++|++|||||||||+|+|+|.+++..+..++. .+.+..+. +|+. ..++||+|.|+
T Consensus 284 g~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~-----------~~~l~~a~-~~~~------------~~~~~pi~~Ai 339 (755)
T TIGR01647 284 AGMDILCSDKTGTLTLNKLSIDEILPFFNGFDK-----------DDVLLYAA-LASR------------EEDQDAIDTAV 339 (755)
T ss_pred cCCcEEEecCCCccccCceEEEEEEecCCCCCH-----------HHHHHHHH-HhCC------------CCCCChHHHHH
Confidence 999999999999999999999999865421111 12233333 2221 12579999999
Q ss_pred HHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHH
Q 047874 434 LSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERT 513 (941)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~ 513 (941)
++++. +.+ ..+..+++.+..||++.+|+|+++++..++++.+.++||+||.++++|++. .+.++
T Consensus 340 ~~~~~-~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~ 403 (755)
T TIGR01647 340 LGSAK-DLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEE 403 (755)
T ss_pred HHHHH-HhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHH
Confidence 99886 322 123346778899999999999999886554556788999999999999742 34566
Q ss_pred HHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHH
Q 047874 514 QIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHT 593 (941)
Q Consensus 514 ~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~ 593 (941)
++++..++++++|+|++++|+++ .|++++|+|+++++||+|++++++|++||++||+++|+|||++.+
T Consensus 404 ~~~~~~~~~~~~G~rvl~vA~~~------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~t 471 (755)
T TIGR01647 404 KVEEKVDELASRGYRALGVARTD------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAI 471 (755)
T ss_pred HHHHHHHHHHhCCCEEEEEEEEc------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 78888899999999999999973 156899999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHH
Q 047874 594 ARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAP 673 (941)
Q Consensus 594 a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~ 673 (941)
|.++|+++||.... .....+.+|.+.+.++++++.+.+++..+|+|++|+||.++|+.+|++|++|+|+|||.||+|
T Consensus 472 A~~IA~~lGI~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDap 548 (755)
T TIGR01647 472 AKETARRLGLGTNI---YTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAP 548 (755)
T ss_pred HHHHHHHcCCCCCC---cCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHH
Confidence 99999999997521 112344566667788899999999999999999999999999999999999999999999999
Q ss_pred HHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q 047874 674 ALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLT 753 (941)
Q Consensus 674 ~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~ 753 (941)
||++|||||||| +|+|+|+++||+++.++++..+++++++||++++|+++++.|.++.|+..++..++..++.+ .|++
T Consensus 549 AL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~ 626 (755)
T TIGR01647 549 ALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFP 626 (755)
T ss_pred HHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchh
Confidence 999999999999 89999999999999999999999999999999999999999999999988776666665444 4599
Q ss_pred HHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhc---c---cC--
Q 047874 754 AVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRS---I---LG-- 825 (941)
Q Consensus 754 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~-- 825 (941)
|+|++|+|+++|. |++++++|++++. ++| +...+ ..++..+...+.+.++..+.++++... + ++
T Consensus 627 ~~~il~~~l~~d~-~~~~l~~~~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (755)
T TIGR01647 627 PIMVVIIAILNDG-TIMTIAYDNVKPS---KLP---QRWNL-REVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQ 698 (755)
T ss_pred HHHHHHHHHHHhH-hHhhccCCCCCCC---CCC---Cccch-HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhccccc
Confidence 9999999999996 6999999998742 233 33333 366666677777776665555544331 1 11
Q ss_pred CccccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccHHHHHHHHHHHHHHHHH
Q 047874 826 VKESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVM 882 (941)
Q Consensus 826 ~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 882 (941)
.+..+.+|++|..+++.|.++.+++|+. ..+|.. ..+++++.+.++..++..++
T Consensus 699 ~~~~~~~t~~f~~~~~~~~~~~~~~r~~--~~~~~~-~p~~~l~~~~~~~~~~~~~~ 752 (755)
T TIGR01647 699 LLHGNLQSLIYLQVSISGQATIFVTRTH--GFFWSE-RPGKLLFIAFVIAQIIATFI 752 (755)
T ss_pred ccHhhhHHHHHHHHHHHHHHHHheeccC--CCCccc-CCcHHHHHHHHHHHHHHHHH
Confidence 1244689999999999999999999983 334432 35777777776666554443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-114 Score=1080.03 Aligned_cols=802 Identities=21% Similarity=0.294 Sum_probs=647.3
Q ss_pred CCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcCccchhHHHHHHHHH
Q 047874 32 KGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFL 111 (941)
Q Consensus 32 ~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~ 111 (941)
.+|||++| +++|+++||+|+++.++ +++++++++++.+|+++++++++++++... +|+++..+++++++
T Consensus 137 ~~GLs~~e--~~~r~~~yG~N~i~~~~-~s~~~ll~~~~~~p~~i~~i~~~~l~~~~~--------~~~~~~~i~~i~~~ 205 (1054)
T TIGR01657 137 SNGLTTGD--IAQRKAKYGKNEIEIPV-PSFLELLKEEVLHPFYVFQVFSVILWLLDE--------YYYYSLCIVFMSST 205 (1054)
T ss_pred ccCCCHHH--HHHHHHhcCCCeeecCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhhh--------hHHHHHHHHHHHHH
Confidence 47999877 99999999999999864 799999999999999999988877766432 57788888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEc--CCCeeecceEEEecceEEEeeccCC
Q 047874 112 VVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLK--TGDQIPADGLFLNGHSLKVDESSMT 189 (941)
Q Consensus 112 ~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~--~G~~iPaD~~ll~g~~l~Vdes~LT 189 (941)
+.+++.++++++.++.+++.. ++..++|+|||++++|+++||||||+|.++ +||+|||||+|++|+ +.||||+||
T Consensus 206 ~~~~~~~~~~k~~~~L~~~~~--~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LT 282 (1054)
T TIGR01657 206 SISLSVYQIRKQMQRLRDMVH--KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhhc--CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEeccccc
Confidence 777777777777666666543 356899999999999999999999999999 999999999999996 599999999
Q ss_pred CCCCceecCC-----------------CCCeEeeccEEee-------eeEEEEEEEEcccChhhHHHHhhcccCCCCChh
Q 047874 190 GESDRVEVDE-----------------KNPFLLSGTKVTA-------GYGFMLVTSVGMSTAWGEMMSSISHELNEETPL 245 (941)
Q Consensus 190 GEs~pv~k~~-----------------~~~~l~aGt~v~~-------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l 245 (941)
|||.|+.|.+ +++++|+||.+.+ |.+.++|++||.+|..|++.+++...+...+++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 9999999974 1357999999985 789999999999999999999998877788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHH
Q 047874 246 QARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLA 325 (941)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~ 325 (941)
++...++...+..++++ .+++++....... .++...+..+++++++++|++||++
T Consensus 363 ~~~~~~~~~~l~~~a~i----~~i~~~~~~~~~~---------------------~~~~~~~l~~l~iiv~~vP~~LP~~ 417 (1054)
T TIGR01657 363 YKDSFKFILFLAVLALI----GFIYTIIELIKDG---------------------RPLGKIILRSLDIITIVVPPALPAE 417 (1054)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHcC---------------------CcHHHHHHHHHHHHHhhcCchHHHH
Confidence 88877776655433322 2222211111110 0466788899999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHH
Q 047874 326 VTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAV 405 (941)
Q Consensus 326 ~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 405 (941)
++++++.++.||+|++++||++.++|.+|++|++|||||||||+|+|+|.+++..+...................+..++
T Consensus 418 ~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (1054)
T TIGR01657 418 LSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKAL 497 (1054)
T ss_pred HHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998754321100000000001122344566
Q ss_pred hccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCC----CcC----------cccccceeEEeCCCCCCCcEEEEE
Q 047874 406 GLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMN----VDE----------PKQYCTVINVEAFNSEKKRSGVLM 471 (941)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~----~~~----------~~~~~~~l~~~~F~s~~k~~sviv 471 (941)
+.||+....+ ....|||+|.|+++++.+....+ ... ....+++++.+||+|++|||||++
T Consensus 498 a~C~~~~~~~------~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv 571 (1054)
T TIGR01657 498 ATCHSLTKLE------GKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIV 571 (1054)
T ss_pred HhCCeeEEEC------CEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEE
Confidence 7787754331 14689999999999864322210 000 024678899999999999999999
Q ss_pred EecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccc----cchhh
Q 047874 472 KRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADG----QVQEK 547 (941)
Q Consensus 472 ~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~----~~~~~ 547 (941)
+..+++++++++|||||.|+++|++. ..++.+++..++++++|+||+++|||++++.+. ...++
T Consensus 572 ~~~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~ 639 (1054)
T TIGR01657 572 STNDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRD 639 (1054)
T ss_pred EEcCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHH
Confidence 98766678899999999999999842 124567888999999999999999999863221 12345
Q ss_pred hhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC------------------
Q 047874 548 LEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVD------------------ 609 (941)
Q Consensus 548 ~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~------------------ 609 (941)
..|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||..++..
T Consensus 640 ~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~ 719 (1054)
T TIGR01657 640 AVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIK 719 (1054)
T ss_pred HHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEE
Confidence 67999999999999999999999999999999999999999999999999999999754310
Q ss_pred -----------------------------CCcccceecchhccc---CCHHHHHHhhcCceEEEecCHHHHHHHHHHHHh
Q 047874 610 -----------------------------LNKDEAVIEGVQFRS---LSAEERIAKIESIRVMARSSPLDKLLMVQSLKQ 657 (941)
Q Consensus 610 -----------------------------~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~ 657 (941)
......+++|++++. +.++++.+.+.+..||||++|+||.++|+.+|+
T Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~ 799 (1054)
T TIGR01657 720 FEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQK 799 (1054)
T ss_pred EEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHh
Confidence 001136888988765 455778888999999999999999999999999
Q ss_pred CCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 658 KGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAAL 737 (941)
Q Consensus 658 ~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~ 737 (941)
.|+.|+|+|||+||+||||+|||||||| ++ | |..+||+++.++++++++++|++||+++.|+++.+.|.+.++++..
T Consensus 800 ~g~~V~m~GDG~ND~~ALK~AdVGIam~-~~-d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~ 876 (1054)
T TIGR01657 800 LDYTVGMCGDGANDCGALKQADVGISLS-EA-E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQF 876 (1054)
T ss_pred CCCeEEEEeCChHHHHHHHhcCcceeec-cc-c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 33 3 4588999999999999999999999999999999999999998875
Q ss_pred HHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Q 047874 738 VINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQ 817 (941)
Q Consensus 738 ~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (941)
+..++ ++..+.|++++|++|+|++++.+++++|+.++|++++|++|| ..+++++.++..++.+++++.++.+..+
T Consensus 877 ~~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P---~~~l~~~~~~~si~~q~~i~~~~~~~~~ 951 (1054)
T TIGR01657 877 YSVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERP---PSNLFSVYILTSVLIQFVLHILSQVYLV 951 (1054)
T ss_pred HHHHH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCC---CccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 54433 233458999999999999999999999999999999999999 4689999999999999998887776665
Q ss_pred HHhh--cccC------C----ccccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccHHHHHHHHHHHHHHHH----
Q 047874 818 FKGR--SILG------V----KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLV---- 881 (941)
Q Consensus 818 ~~~~--~~~~------~----~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---- 881 (941)
+... .|+. . .....+|++| .++.+|.++.+.+++. ..||.+++++|+++++++++++++++.
T Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~-g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~ 1029 (1054)
T TIGR01657 952 FELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSK-GPPFREPIYKNKPFVYLLITGLGLLLVLLLD 1029 (1054)
T ss_pred HHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcC-CcchhhhHHHhHHHHHHHHHHHHHHHHhhhC
Confidence 4433 2331 0 1233468888 5666677777777763 567777999999998888877665542
Q ss_pred HHHHhhhcccccCCChHHHH
Q 047874 882 MVEFLKTFADTERLNWGQWA 901 (941)
Q Consensus 882 ~~~~~~~~f~~~~l~~~~~~ 901 (941)
.++.++.+|++.++|. .|.
T Consensus 1030 ~~~~l~~~~~~~~~~~-~~~ 1048 (1054)
T TIGR01657 1030 PHPLLGKILQIVPLPQ-EFR 1048 (1054)
T ss_pred CCHHHHhhheeeeCCH-HHH
Confidence 2467899999999985 443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-105 Score=995.30 Aligned_cols=839 Identities=21% Similarity=0.258 Sum_probs=640.1
Q ss_pred cCCCcCCCCCCccH---HHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcCccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 49 FGRNRYKKPPAKRF---ISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSR 125 (941)
Q Consensus 49 ~G~N~~~~~~~~~~---~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~ 125 (941)
|.+|.+...|...+ ++.+++||++++|+||++++++++++.+++.++ ...++++++++++++++++.++.
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~-------~t~~~pL~~v~~~~~~~~~~ed~ 73 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYR-------GTSIVPLAFVLIVTAIKEAIEDI 73 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCc-------cHhHHhHHHHHHHHHHHHHHHHH
Confidence 56899988887655 788999999999999999999999988765432 23456777777788888888888
Q ss_pred HHHHHhcccCCCeEEEEEC-CEEeeeecCCcccCcEEEEcCCCeeecceEEEecce----EEEeeccCCCCCCceecCC-
Q 047874 126 QFQALANESSDIRVEVVRD-GRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHS----LKVDESSMTGESDRVEVDE- 199 (941)
Q Consensus 126 ~~~~l~~~~~~~~~~V~R~-g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~----l~Vdes~LTGEs~pv~k~~- 199 (941)
++++.++..|+++++|+|+ |++++++|+||+|||+|.|++||+||||+++++++. +.||||+|||||.|+.|.+
T Consensus 74 ~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 74 RRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 8888887788899999997 899999999999999999999999999999998654 7999999999999998852
Q ss_pred ----------------------------------------------CCCeEeeccEEee-eeEEEEEEEEcccChhhHHH
Q 047874 200 ----------------------------------------------KNPFLLSGTKVTA-GYGFMLVTSVGMSTAWGEMM 232 (941)
Q Consensus 200 ----------------------------------------------~~~~l~aGt~v~~-g~~~~~V~~tG~~T~~g~i~ 232 (941)
.+|++++||.+.. |+++|+|++||.+|. +.
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk---~~ 230 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTK---LM 230 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhh---hh
Confidence 1257889999977 999999999999994 55
Q ss_pred HhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCC-ccccccchhhHHHHHHHHH
Q 047874 233 SSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGG-KTKFDDVMNSVINIIAAAV 311 (941)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i 311 (941)
++....+.+++++++.++++..++..+.++++++++++...+ ..... ...|... .....+....+...+..++
T Consensus 231 ~n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~--~~~~~----~~~~yl~~~~~~~~~~~~~~~~~~~~~ 304 (1057)
T TIGR01652 231 RNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIW--NDAHG----KDLWYIRLDVSERNAAANGFFSFLTFL 304 (1057)
T ss_pred hcCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhe--ecccC----CCccceecCcccccchhHHHHHHHHHH
Confidence 566666778899999999999888777776666655543221 11000 0012110 0000111123455677889
Q ss_pred HHHHHHcCCchhHHHHHHHHHHH------HHHhhh----hhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCC
Q 047874 312 TIIVVAIPEGLPLAVTLTLAFSM------KRMMKD----HAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGK 381 (941)
Q Consensus 312 ~ll~~~~P~~L~~~~~~~~~~~~------~~l~~~----~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~ 381 (941)
.++..++|.+|++.+++++..++ .+|.++ ++.+|+.+.+|+||+|++||+|||||||+|+|+++++++++
T Consensus 305 ~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g 384 (1057)
T TIGR01652 305 ILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAG 384 (1057)
T ss_pred HHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECC
Confidence 99999999999999999999998 778764 49999999999999999999999999999999999999887
Q ss_pred cccccccch------------------------------hhh---------hHHHHHHHHHHHhccCccccccCCCC-C-
Q 047874 382 EAMKSDACS------------------------------LEL---------AQNLYELLQEAVGLNTTGNVYNSNSL-S- 420 (941)
Q Consensus 382 ~~~~~~~~~------------------------------~~~---------~~~~~~~l~~~~~~~~~~~~~~~~~~-~- 420 (941)
..|..+... ..+ .......+..++++||++.....++. .
T Consensus 385 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~ 464 (1057)
T TIGR01652 385 VSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEE 464 (1057)
T ss_pred EEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCc
Confidence 665421100 000 00112334456778888765431111 1
Q ss_pred CccccCCccHHHHHHHHHHhcCCCCcC--------------cccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCc
Q 047874 421 TSEITGSPTEKAILSWAMIDLGMNVDE--------------PKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGA 486 (941)
Q Consensus 421 ~~~~~~~p~e~al~~~~~~~~~~~~~~--------------~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa 486 (941)
..+..+||+|.|++++|+ ..|+.+.. ....+++++++||+|+||||||+++++++ ++.+++|||
T Consensus 465 ~~y~~~sp~E~ALl~~a~-~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~-~~~l~~KGA 542 (1057)
T TIGR01652 465 ITYQAASPDEAALVKAAR-DVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDG-RIKLLCKGA 542 (1057)
T ss_pred eEEEccCCcHHHHHHHHH-HCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCC-eEEEEEeCc
Confidence 224468999999999998 78875532 22458899999999999999999987654 588999999
Q ss_pred HHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccch---------------------
Q 047874 487 AEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQ--------------------- 545 (941)
Q Consensus 487 ~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~--------------------- 545 (941)
||.|+++|+.. +++.++.+++..++++++|+||+++|+|.+++++...+
T Consensus 543 ~e~il~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~ 612 (1057)
T TIGR01652 543 DTVIFKRLSSG----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVV 612 (1057)
T ss_pred HHHHHHHhhcc----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 99999999741 23456778899999999999999999999876532211
Q ss_pred hhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC---------------
Q 047874 546 EKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL--------------- 610 (941)
Q Consensus 546 ~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~--------------- 610 (941)
.+..|+|++|+|+++++|++|++++++|+.|++|||++||+|||+.+||.++|+++|+.+++...
T Consensus 613 ~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~ 692 (1057)
T TIGR01652 613 AESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVE 692 (1057)
T ss_pred HHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHH
Confidence 13468999999999999999999999999999999999999999999999999999998754310
Q ss_pred --------------------CcccceecchhcccCCHHH----HHHhhcCc--eEEEecCHHHHHHHHHHHHhC-CCEEE
Q 047874 611 --------------------NKDEAVIEGVQFRSLSAEE----RIAKIESI--RVMARSSPLDKLLMVQSLKQK-GHVVA 663 (941)
Q Consensus 611 --------------------~~~~~~~~g~~~~~~~~~~----~~~~~~~~--~v~~~~~p~~K~~iv~~l~~~-g~~v~ 663 (941)
.....+++|+.++.+.+++ +.+.+..+ .||||++|+||.++|+.+|+. |++|+
T Consensus 693 ~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl 772 (1057)
T TIGR01652 693 AAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTL 772 (1057)
T ss_pred HHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEE
Confidence 1123588998887655433 34444444 599999999999999999998 99999
Q ss_pred EEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 664 VTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVL-RWGRCVYNNIQKFLQFQLTVNVAALVINFG 742 (941)
Q Consensus 664 ~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~ 742 (941)
|+|||+||++||++|||||++.+....+|+++||+++. +|..+.+++ .|||++|+|+++.+.|.+++|+..++++++
T Consensus 773 ~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~ 850 (1057)
T TIGR01652 773 AIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFW 850 (1057)
T ss_pred EEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999853444479999999998 599999987 889999999999999999999999999998
Q ss_pred HHHhcC---CCchhHHHHHHHHhhhhHHHHHHhcc--cCCCCCccCCCCC----CCCCCCccHHHHHHHHHHHHHHHHHH
Q 047874 743 AAVSSG---KVPLTAVQLLWVNLIMDTLGALALAT--EQPTNDLMSKPPV----GRSKPLITKIMWRNLISQAIYQVAIL 813 (941)
Q Consensus 743 ~~~~~~---~~~l~~~~~l~~~~~~~~~~~~~l~~--~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (941)
+.++.+ .+++++++++|+|++++.+|+++++. +++++++|.++|+ .++.++++.+.+..|++.++++++++
T Consensus 851 ~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii 930 (1057)
T TIGR01652 851 YSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVI 930 (1057)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 887654 46789999999999999999999975 4556788888887 45678888888888889999999887
Q ss_pred HHHHHHhhccc-----CC--ccccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccHHHHHHHHHHHHHHHHHHHHh
Q 047874 814 LTLQFKGRSIL-----GV--KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFL 886 (941)
Q Consensus 814 ~~~~~~~~~~~-----~~--~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 886 (941)
+++.+...... |. +.....+++|.++++...+..+..-. .| +++.++++.+++++.+++....
T Consensus 931 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~w-t~~~~~~~~~S~~~~~~~~~~~ 1000 (1057)
T TIGR01652 931 FFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEIN---------RW-NWISLITIWGSILVWLIFVIVY 1000 (1057)
T ss_pred HHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHh---------Hh-HHHHHHHHHHHHHHHHHHHHHH
Confidence 66544332211 11 12234455555555544444322110 11 2222334444444433332222
Q ss_pred hhcc---------cccCCChHHHHHHHHHHHHHHHHHHHHHhccccCccc
Q 047874 887 KTFA---------DTERLNWGQWAACIGIAAMSWPIGFLIKCIPVSGKQL 927 (941)
Q Consensus 887 ~~~f---------~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 927 (941)
..++ ....-++.+|+.+++..+++++++.+.|.+.+...|.
T Consensus 1001 ~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~ 1050 (1057)
T TIGR01652 1001 SSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPP 1050 (1057)
T ss_pred HhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 2111 1111357789988888888999999999988755553
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-100 Score=939.27 Aligned_cols=850 Identities=18% Similarity=0.226 Sum_probs=630.0
Q ss_pred hcCCCcCCCCCCc---cHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcCccchhHHHHHHHHHHHHHHHHHHHHHH
Q 047874 48 VFGRNRYKKPPAK---RFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQS 124 (941)
Q Consensus 48 ~~G~N~~~~~~~~---~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~ 124 (941)
+|..|.+...|.. -+.+.+++||+++.|+||++++++++++.+++.++ .+.+++++++++++++++..++
T Consensus 86 ~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~-------~t~~~PL~~vl~v~~ike~~Ed 158 (1178)
T PLN03190 86 EFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGR-------GASILPLAFVLLVTAVKDAYED 158 (1178)
T ss_pred cCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCc-------chHHHHHHHHHHHHHHHHHHHH
Confidence 5888999887764 34456899999999999999999999998766542 2456788888889999999999
Q ss_pred HHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEecce----EEEeeccCCCCCCceecCC-
Q 047874 125 RQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHS----LKVDESSMTGESDRVEVDE- 199 (941)
Q Consensus 125 ~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~----l~Vdes~LTGEs~pv~k~~- 199 (941)
.++++.++..|++.++|+|+|.+++++|++|+|||+|+|++||++|||+++++++. ++|||++|||||.|+.|.+
T Consensus 159 ~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~ 238 (1178)
T PLN03190 159 WRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAK 238 (1178)
T ss_pred HHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEeccc
Confidence 99999988889999999999999999999999999999999999999999998432 6999999999999998852
Q ss_pred -------------------------------------------CCCeEeeccEE-eeeeEEEEEEEEcccChhhHHHHhh
Q 047874 200 -------------------------------------------KNPFLLSGTKV-TAGYGFMLVTSVGMSTAWGEMMSSI 235 (941)
Q Consensus 200 -------------------------------------------~~~~l~aGt~v-~~g~~~~~V~~tG~~T~~g~i~~~~ 235 (941)
.+|++++|+.+ .+.+++|+|++||.+| |++.+.
T Consensus 239 ~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~N~ 315 (1178)
T PLN03190 239 QETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAMLNN 315 (1178)
T ss_pred chhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhhcC
Confidence 13456677776 3458999999999999 788777
Q ss_pred cccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCc---------cccccchhhHHHH
Q 047874 236 SHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGK---------TKFDDVMNSVINI 306 (941)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 306 (941)
..++.+.+++++.+|++..++..+.+++|+++.++...+...+. +......|.... ..+..........
T Consensus 316 ~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~--~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (1178)
T PLN03190 316 SGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHR--DELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFT 393 (1178)
T ss_pred CCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccc--ccccccccccccccccccccccccchhhHHHHHH
Confidence 77778999999999999998888777777666555322211111 000001111000 0000000011233
Q ss_pred HHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhh----------hhccCchhhhhccCeeEEEeCcccccccCceEEEE
Q 047874 307 IAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDH----------AMVRKLSACETMGSATTICTDKTGTLTLNQMKVTE 376 (941)
Q Consensus 307 ~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~----------ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~ 376 (941)
+..++.++..++|.+|++.+++++...+.++.++. +.+|+.+.+|+||+|++||+|||||||+|+|++++
T Consensus 394 f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~ 473 (1178)
T PLN03190 394 FLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 473 (1178)
T ss_pred HHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEE
Confidence 45556777899999999999999988888888766 67999999999999999999999999999999999
Q ss_pred EEeCCcccccccc--------------------------hhhh--------h---HHHHHHHHHHHhccCccccccCCC-
Q 047874 377 FWLGKEAMKSDAC--------------------------SLEL--------A---QNLYELLQEAVGLNTTGNVYNSNS- 418 (941)
Q Consensus 377 ~~~~~~~~~~~~~--------------------------~~~~--------~---~~~~~~l~~~~~~~~~~~~~~~~~- 418 (941)
+++++..|+.... ...+ . ....+.+..++++||++.....++
T Consensus 474 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~ 553 (1178)
T PLN03190 474 ASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDT 553 (1178)
T ss_pred EEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCC
Confidence 9997765532100 0000 0 011233445778899876532111
Q ss_pred -CC----CccccCCccHHHHHHHHHHhcCC------------CCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEE
Q 047874 419 -LS----TSEITGSPTEKAILSWAMIDLGM------------NVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHT 481 (941)
Q Consensus 419 -~~----~~~~~~~p~e~al~~~~~~~~~~------------~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~ 481 (941)
.. ..+..+||+|.||+++|+ ++|+ +....+..++++.++||+|+||||||++++++ +++.+
T Consensus 554 ~~~~~~~~~Y~a~SPdE~ALv~~a~-~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~-~~~~l 631 (1178)
T PLN03190 554 SDPTVKLMDYQGESPDEQALVYAAA-AYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPD-KTVKV 631 (1178)
T ss_pred CCccccceEEecCCCcHHHHHHHHH-HCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCC-CcEEE
Confidence 11 124556999999999998 8887 33344567899999999999999999998754 45889
Q ss_pred EecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccch----------------
Q 047874 482 HWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQ---------------- 545 (941)
Q Consensus 482 ~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~---------------- 545 (941)
|+|||||.|+++|++.. +++.++.+++..++++++|+||+++|||.+++++...+
T Consensus 632 ~~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~ 702 (1178)
T PLN03190 632 FVKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAA 702 (1178)
T ss_pred EEecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHH
Confidence 99999999999997532 23456778889999999999999999999876433211
Q ss_pred -----hhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC----------
Q 047874 546 -----EKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL---------- 610 (941)
Q Consensus 546 -----~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~---------- 610 (941)
.+.+|+|++++|+++++|++|++++++|++|+++||++||+|||+..||.++|++||+.+++...
T Consensus 703 ~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~ 782 (1178)
T PLN03190 703 LLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKES 782 (1178)
T ss_pred HHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhh
Confidence 13468999999999999999999999999999999999999999999999999999998664210
Q ss_pred ---------------------------------CcccceecchhcccCCH----HHHHHhhcCc--eEEEecCHHHHHHH
Q 047874 611 ---------------------------------NKDEAVIEGVQFRSLSA----EERIAKIESI--RVMARSSPLDKLLM 651 (941)
Q Consensus 611 ---------------------------------~~~~~~~~g~~~~~~~~----~~~~~~~~~~--~v~~~~~p~~K~~i 651 (941)
.....+++|..+..+.+ +++.+...++ .||||++|.||+++
T Consensus 783 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~I 862 (1178)
T PLN03190 783 CRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGI 862 (1178)
T ss_pred HHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHH
Confidence 01236888988887764 3455555444 48999999999999
Q ss_pred HHHHHhC-CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHH-HHHHHHHHHHHHHHHHH
Q 047874 652 VQSLKQK-GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVL-RWGRCVYNNIQKFLQFQ 729 (941)
Q Consensus 652 v~~l~~~-g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~ 729 (941)
|+.+|+. +++|+|+|||+||++||++|||||++.+.+..+|+.+||+++. .|..+.+++ .|||+.|.|+.+.+.|.
T Consensus 863 V~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~--~Fr~L~rLLlvHGr~~y~R~s~~i~y~ 940 (1178)
T PLN03190 863 VALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMG--QFRFLVPLLLVHGHWNYQRMGYMILYN 940 (1178)
T ss_pred HHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchh--hhHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 9999997 5899999999999999999999998765666699999999999 555566665 79999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC---CchhHHHHHHHHhhhhHHHHHHhcc-c--CCCCCccCCCCCC---CCCCCccHHHHH
Q 047874 730 LTVNVAALVINFGAAVSSGK---VPLTAVQLLWVNLIMDTLGALALAT-E--QPTNDLMSKPPVG---RSKPLITKIMWR 800 (941)
Q Consensus 730 l~~n~~~~~~~~~~~~~~~~---~~l~~~~~l~~~~~~~~~~~~~l~~-~--~~~~~~~~~~p~~---~~~~~~~~~~~~ 800 (941)
||+|++.+++++++.++.++ +.++.+.+.++|++++.+|.++++. | -|++.+++.|..+ ++...++...+.
T Consensus 941 fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~ 1020 (1178)
T PLN03190 941 FYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFW 1020 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHH
Confidence 99999999999999887664 4568899999999999999999964 4 4556667776554 345678888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCccccchhHHHHHHHHHHHHHHh-hhccCCcccccccCcccHHHHHHHHHHHHHH
Q 047874 801 NLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFNTFVLCQIFNEF-NARKLEKKNIFKGIHKNKLFLAIIGITIALQ 879 (941)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~-~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 879 (941)
.|++.++++++++|++.+....-...+.....++.+...++...+... ..++ | +++-++++.+++++.
T Consensus 1021 ~w~~~~i~qs~iiff~~~~~~~~~~~~~~~~~~~~~~~~v~~vnl~i~~~~~~----------w-t~~~~~~i~~Si~~~ 1089 (1178)
T PLN03190 1021 LTMIDTLWQSAVVFFVPLFAYWASTIDGSSIGDLWTLAVVILVNLHLAMDIIR----------W-NWITHAAIWGSIVAT 1089 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcCceeEhHhhhhHHHHHHHHHHHHHHhh----------h-hHHHHHHHHHHHHHH
Confidence 899999999988876554322111111112233333333333322221 1111 1 221122233333322
Q ss_pred HHHHHHh------hhc--ccccCCChHHHHHHHHHHHHHHHHHHHHHhccccCccc-ccchHH
Q 047874 880 LVMVEFL------KTF--ADTERLNWGQWAACIGIAAMSWPIGFLIKCIPVSGKQL-LPINQE 933 (941)
Q Consensus 880 ~~~~~~~------~~~--f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~ 933 (941)
+++..+. ..+ +....-++.+|+.+++..+++++++.+.|.+.+...|. ++..|+
T Consensus 1090 ~i~~~~~~~~~~~~~~~~~~~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~ 1152 (1178)
T PLN03190 1090 FICVIVIDAIPTLPGYWAIFHIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIARE 1152 (1178)
T ss_pred HHHHHHHHhcccchhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 2221111 111 10111257789888888888899999999888755554 343333
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-94 Score=809.03 Aligned_cols=802 Identities=21% Similarity=0.283 Sum_probs=608.2
Q ss_pred CCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcCccchhHHHHHHHHH
Q 047874 32 KGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFL 111 (941)
Q Consensus 32 ~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~ 111 (941)
.+||+..+ +.+|+..||+|.+..+. ++.+.++.++.-+|+.+++.+..+++..-. +++++..|++.-+.
T Consensus 158 ~~gL~~~~--~~~r~~iyG~N~i~l~i-k~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~--------Y~~YA~cI~iisv~ 226 (1140)
T KOG0208|consen 158 SNGLERQE--IIDRRIIYGRNVISLPI-KSISQILVKEVLNPFYLFQAFSVALWLADS--------YYYYAFCIVIISVY 226 (1140)
T ss_pred cCCccHHH--HHhHHhhcCCceeeeec-ccHHHHHHHhccchHHHHHhHHhhhhhccc--------chhhhhHHHHHHHH
Confidence 57997765 99999999999999874 699999999999999999998888776543 34445555544444
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcC-CCeeecceEEEecceEEEeeccCCC
Q 047874 112 VVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKT-GDQIPADGLFLNGHSLKVDESSMTG 190 (941)
Q Consensus 112 ~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~-G~~iPaD~~ll~g~~l~Vdes~LTG 190 (941)
.++.+.++..+++++++++-+. ...|+|+|||.+++|.++|||||||+.+.+ |-..|||++|++|++ .||||+|||
T Consensus 227 Si~~sv~e~r~qs~rlr~mv~~--~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEsmLTG 303 (1140)
T KOG0208|consen 227 SIVLSVYETRKQSIRLRSMVKF--TCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNESMLTG 303 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--CceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-EeecccccC
Confidence 5556666666666666666543 358999999999999999999999999988 999999999999987 899999999
Q ss_pred CCCceecCC------------------CCCeEeeccEEee------eeEEEEEEEEcccChhhHHHHhhcccCCCCChhH
Q 047874 191 ESDRVEVDE------------------KNPFLLSGTKVTA------GYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQ 246 (941)
Q Consensus 191 Es~pv~k~~------------------~~~~l~aGt~v~~------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~ 246 (941)
||.|+.|.+ ..+.+|+||++.+ +.+.++|++||.+|..|++.+++..++.....+-
T Consensus 304 ESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfy 383 (1140)
T KOG0208|consen 304 ESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFY 383 (1140)
T ss_pred CcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHH
Confidence 999999974 3457999999964 5789999999999999999999987654443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHH
Q 047874 247 ARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAV 326 (941)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~ 326 (941)
+..-+ ++....++|++.++...+.+..... +....+..++.++.+.+|+|||.++
T Consensus 384 rds~~----fi~~l~~ia~~gfiy~~i~l~~~g~---------------------~~~~iiirsLDliTi~VPPALPAal 438 (1140)
T KOG0208|consen 384 RDSFK----FILFLVIIALIGFIYTAIVLNLLGV---------------------PLKTIIIRSLDLITIVVPPALPAAL 438 (1140)
T ss_pred HHHHH----HHHHHHHHHHHHHHHHhHhHHHcCC---------------------CHHHHhhhhhcEEEEecCCCchhhh
Confidence 33322 2223333444444443333222110 4567888999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCccccccc----c-----------hh
Q 047874 327 TLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDA----C-----------SL 391 (941)
Q Consensus 327 ~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~----~-----------~~ 391 (941)
+++..++.+||.|+||.|-++..+...|++|++|||||||||++.+.+-.+......-+... . ..
T Consensus 439 tvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 518 (1140)
T KOG0208|consen 439 TVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSL 518 (1140)
T ss_pred hHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccc
Confidence 99999999999999999999999999999999999999999999999988876432211000 0 00
Q ss_pred hhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCC------C------------------CcC
Q 047874 392 ELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGM------N------------------VDE 447 (941)
Q Consensus 392 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~------~------------------~~~ 447 (941)
..+......+..+++.||..... .....|||.|..+.+...|.+.. . ++.
T Consensus 519 ~~~~~~~~~~~~a~atCHSL~~v------~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~ 592 (1140)
T KOG0208|consen 519 RSSSLPMGNLVAAMATCHSLTLV------DGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQ 592 (1140)
T ss_pred cccCCchHHHHHHHhhhceeEEe------CCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccC
Confidence 00000123455667777754332 23467889888877755432210 0 000
Q ss_pred ----cccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHH
Q 047874 448 ----PKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMA 523 (941)
Q Consensus 448 ----~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~ 523 (941)
..+.+.+++.+||+|..+|||||+...++++..+|+|||||.|.+.|++.. .+..+++..++|+
T Consensus 593 ~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~t------------vP~dy~evl~~Yt 660 (1140)
T KOG0208|consen 593 STECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPET------------VPADYQEVLKEYT 660 (1140)
T ss_pred CCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCccc------------CCccHHHHHHHHH
Confidence 011477899999999999999999998888899999999999999998643 3456889999999
Q ss_pred hcccceeeeeeecccccc----ccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHH
Q 047874 524 AKSLRCIAFAHTKAAEAD----GQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAI 599 (941)
Q Consensus 524 ~~g~r~l~~a~~~~~~~~----~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~ 599 (941)
.+|+|++|+|+|+++... ....++..|+|++|+|++.||+++|++++.+|++|++|+||++|+||||..||..+||
T Consensus 661 ~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVak 740 (1140)
T KOG0208|consen 661 HQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAK 740 (1140)
T ss_pred hCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhh
Confidence 999999999999987651 1234778899999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCCC-------------------------------------------------CcccceecchhcccC---CH
Q 047874 600 ECGILNPDVDL-------------------------------------------------NKDEAVIEGVQFRSL---SA 627 (941)
Q Consensus 600 ~~gi~~~~~~~-------------------------------------------------~~~~~~~~g~~~~~~---~~ 627 (941)
+||+..+.... ......++|+.+.-+ ..
T Consensus 741 eCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~ 820 (1140)
T KOG0208|consen 741 ECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFP 820 (1140)
T ss_pred cccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcH
Confidence 99998764311 112345566665543 34
Q ss_pred HHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchH
Q 047874 628 EERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSS 707 (941)
Q Consensus 628 ~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~ 707 (941)
+.+...+.+..|||||+|.||.++|..+|+.|+.|+|||||+||+.|||+||+||+++.+ .|.-+|.+.-...+...
T Consensus 821 ~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSea---EASvAApFTSk~~~I~c 897 (1140)
T KOG0208|consen 821 ELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEA---EASVAAPFTSKTPSISC 897 (1140)
T ss_pred HHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhh---hHhhcCccccCCCchhh
Confidence 667788889999999999999999999999999999999999999999999999999843 45566999988899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCC
Q 047874 708 VVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPV 787 (941)
Q Consensus 708 i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~ 787 (941)
+.+.|+|||+.+..--..++|...|.++..+..+ .++.....++..|.++++++...+.+++++..+|..++-..||
T Consensus 898 Vp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP- 974 (1140)
T KOG0208|consen 898 VPDVIREGRAALVTSFACFKYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP- 974 (1140)
T ss_pred HhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh--eeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC-
Confidence 9999999999999999999999888876543332 3455677889999999999999999999999999999887777
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHh--hcccCC--------ccccchhHHHHHHHHHHHHHHhhhccCCccc
Q 047874 788 GRSKPLITKIMWRNLISQAIYQVAILLTLQFKG--RSILGV--------KESVKDTMIFNTFVLCQIFNEFNARKLEKKN 857 (941)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--------~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~ 857 (941)
+..++++..+..++++.++..++-+..++.. ++|+.. ..+...|.+|++-.+..+++.+.... ..|
T Consensus 975 --~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~v~S~--g~p 1050 (1140)
T KOG0208|consen 975 --PTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIALVLSK--GSP 1050 (1140)
T ss_pred --CccccccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhheeecc--CCc
Confidence 4567888777777777766655554444322 244432 12234456665544444555443322 456
Q ss_pred ccccCcccHHHHHHHHHHHHHHHHH--HHH---hhhcccccCCChHHH
Q 047874 858 IFKGIHKNKLFLAIIGITIALQLVM--VEF---LKTFADTERLNWGQW 900 (941)
Q Consensus 858 ~~~~~~~n~~~~~~~~~~~~~~~~~--~~~---~~~~f~~~~l~~~~~ 900 (941)
+.+++|+|+.|...+....+..+.+ +.. ....++.++.+-...
T Consensus 1051 fr~pl~~n~~f~~~i~~i~~~~i~l~~~~~~~~~~~l~~~t~~~~~~~ 1098 (1140)
T KOG0208|consen 1051 FRRPLWKNVLFKVFITVIILSTIYLLFVNYLFIEWKLLQLTYIPTTFD 1098 (1140)
T ss_pred ccCchhcCceeeeehhhHHhhhhhhhhccccchhhhhhceeccCcchh
Confidence 6679999987765443333222222 211 124577777765333
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-89 Score=742.69 Aligned_cols=815 Identities=22% Similarity=0.267 Sum_probs=631.2
Q ss_pred HHHhhcCCCcCCCCCCc---cHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcCccchhHHHHHHHHHHHHHHHHHH
Q 047874 44 HRINVFGRNRYKKPPAK---RFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSN 120 (941)
Q Consensus 44 ~r~~~~G~N~~~~~~~~---~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~ 120 (941)
.++++|-+|.+.+.|.+ -+...+++||+.+.|++|++.++.++++.+......++| .++.++..++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~-------~pl~fvl~itl~ke 146 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYW-------GPLGFVLTITLIKE 146 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhh-------HHHHHHHHHHHHHH
Confidence 56677888888877654 355678999999999999999999998865443222233 23333333333444
Q ss_pred HHHHHHHHHHhcccCCCeEEEE-ECCEEeeeecCCcccCcEEEEcCCCeeecceEEEecc----eEEEeeccCCCCCCce
Q 047874 121 FKQSRQFQALANESSDIRVEVV-RDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGH----SLKVDESSMTGESDRV 195 (941)
Q Consensus 121 ~~~~~~~~~l~~~~~~~~~~V~-R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~----~l~Vdes~LTGEs~pv 195 (941)
..++-++++-++..|+...+++ |+|.... +++++++||+|.++.+++||||.++++.+ .+.+.+-.|+||++.+
T Consensus 147 avdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWK 225 (1051)
T KOG0210|consen 147 AVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWK 225 (1051)
T ss_pred HHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccce
Confidence 4333333333444455555555 6765544 99999999999999999999999999644 3689999999999755
Q ss_pred ecCC----------------------------------------------CCCeEeeccEEeeeeEEEEEEEEcccChhh
Q 047874 196 EVDE----------------------------------------------KNPFLLSGTKVTAGYGFMLVTSVGMSTAWG 229 (941)
Q Consensus 196 ~k~~----------------------------------------------~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g 229 (941)
-|-+ -+|.++++|.+.+|.+.|+|++||.+|
T Consensus 226 Lrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dt--- 302 (1051)
T KOG0210|consen 226 LRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDT--- 302 (1051)
T ss_pred eeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccH---
Confidence 4321 246799999999999999999999999
Q ss_pred HHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHH
Q 047874 230 EMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAA 309 (941)
Q Consensus 230 ~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (941)
|-.++...++.+-.-++..+|.+.+.+....+.++++.... .|.. +.|...+..
T Consensus 303 RsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~------~g~~--------------------~~wyi~~~R 356 (1051)
T KOG0210|consen 303 RSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAM------KGFG--------------------SDWYIYIIR 356 (1051)
T ss_pred HHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHh------hcCC--------------------CchHHHHHH
Confidence 66666667777778889999999988876666655543322 2211 145667888
Q ss_pred HHHHHHHHcCCchhHHHHHHHHHHHHHHhhh----hhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccc
Q 047874 310 AVTIIVVAIPEGLPLAVTLTLAFSMKRMMKD----HAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMK 385 (941)
Q Consensus 310 ~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~----~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~ 385 (941)
++.++...+|.+|-+.+.++...-...+.++ |.++|+....|+||+++++.+|||||||+|+|++++++.+...|+
T Consensus 357 fllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s 436 (1051)
T KOG0210|consen 357 FLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYS 436 (1051)
T ss_pred HHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeecc
Confidence 8999999999999999999999988888876 577999999999999999999999999999999999998876665
Q ss_pred cccch-------------------------hhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHh
Q 047874 386 SDACS-------------------------LELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMID 440 (941)
Q Consensus 386 ~~~~~-------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~ 440 (941)
.+... .+.+... +.+..++++||+.....++++...++..+|+|.|+++|.+ .
T Consensus 437 ~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv-~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe-~ 514 (1051)
T KOG0210|consen 437 AETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARV-RNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTE-T 514 (1051)
T ss_pred HhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHH-HHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeee-e
Confidence 43210 0111122 2344577899988877666667788999999999999987 6
Q ss_pred cCCCCcCc-------------ccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeC
Q 047874 441 LGMNVDEP-------------KQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRIL 507 (941)
Q Consensus 441 ~~~~~~~~-------------~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l 507 (941)
.|.....+ ...|++++.+||+|+.|||+++++++..+++..|.|||+..|.....
T Consensus 515 VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq------------ 582 (1051)
T KOG0210|consen 515 VGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ------------ 582 (1051)
T ss_pred cceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc------------
Confidence 66543322 23689999999999999999999999888899999999999865443
Q ss_pred CHHHHHHHHHHHHHHHhcccceeeeeeeccccccccch----------------------hhhhccCcEEEEEEeccCCC
Q 047874 508 DGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQ----------------------EKLEETGLTLLGLVGLKDPC 565 (941)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~----------------------~~~~e~~l~~lG~i~~~d~~ 565 (941)
..+++++...+++++|+|++++|+|.+++++.+.. +..+|+|+.++|+++.||++
T Consensus 583 ---~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkL 659 (1051)
T KOG0210|consen 583 ---YNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKL 659 (1051)
T ss_pred ---cchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHH
Confidence 23577888899999999999999999987655422 23569999999999999999
Q ss_pred CcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC----------------------Ccccceecchhcc
Q 047874 566 RPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL----------------------NKDEAVIEGVQFR 623 (941)
Q Consensus 566 ~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~----------------------~~~~~~~~g~~~~ 623 (941)
+++++.+++.||+||||+||+|||+.+||..+|+..++...+.+. ...+.+++|+.++
T Consensus 660 Q~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~ 739 (1051)
T KOG0210|consen 660 QDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLE 739 (1051)
T ss_pred hhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHH
Confidence 999999999999999999999999999999999999998765532 3456788887765
Q ss_pred c---CCHHHHHHhhcC--ceEEEecCHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccC
Q 047874 624 S---LSAEERIAKIES--IRVMARSSPLDKLLMVQSLKQK-GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSD 697 (941)
Q Consensus 624 ~---~~~~~~~~~~~~--~~v~~~~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad 697 (941)
- ..++|+.+..+. ..++|||+|+||+++++.+|++ |..|+++|||.||+.|+++||+||++-+++..+|.-+||
T Consensus 740 ~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAAD 819 (1051)
T KOG0210|consen 740 FCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAAD 819 (1051)
T ss_pred HHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhcc
Confidence 3 334556555443 4699999999999999999986 899999999999999999999999987789999999999
Q ss_pred EEeccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhH---HHHHHHHhhhhHHHHHHhc
Q 047874 698 IVIMDDNFSSVVTVL-RWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTA---VQLLWVNLIMDTLGALALA 773 (941)
Q Consensus 698 ~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~---~~~l~~~~~~~~~~~~~l~ 773 (941)
+.+. .|..+.+++ -|||..|+|..+.-+|.+-..++...++.+++..+.+.|..- +.+.-+..+++.+|.+++.
T Consensus 820 fSIt--qF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv 897 (1051)
T KOG0210|consen 820 FSIT--QFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLV 897 (1051)
T ss_pred ccHH--HHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheee
Confidence 9998 677787776 679999999999999999999998888888876655555544 4456678899999999999
Q ss_pred ccCC--CCCccCCCCCCC---CCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccccchhHHHHHHHHHHHHHHh
Q 047874 774 TEQP--TNDLMSKPPVGR---SKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFNTFVLCQIFNEF 848 (941)
Q Consensus 774 ~~~~--~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~ 848 (941)
.++. +...+..|..++ ++..++.+.+..|...++||..++.+..+ ..+..+.....++.|.++++..+....
T Consensus 898 ~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~---~l~~~ef~~ivaisFtaLi~tELiMVa 974 (1051)
T KOG0210|consen 898 LDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGAL---LLFDTEFIHIVAISFTALILTELIMVA 974 (1051)
T ss_pred ecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHH---HHhhhhheEeeeeeeHHHHHHHHHHHh
Confidence 8764 222344443322 34556666677777889998877644222 123444566778889999888877654
Q ss_pred hhccCCcccccccCcccHHHHHHHHHHHHHHHHHHHHhhhcccccCC-ChHHHHHHHHHHHHHHHHHHHHHhccccCccc
Q 047874 849 NARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERL-NWGQWAACIGIAAMSWPIGFLIKCIPVSGKQL 927 (941)
Q Consensus 849 ~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l-~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 927 (941)
..-+ ..+|.+.++-++++.++++.++++.++|+...+ ++.+++...++.++.+++.+..|.+.|+-+|-
T Consensus 975 Ltv~----------tw~~~m~vae~lsL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPp 1044 (1051)
T KOG0210|consen 975 LTVR----------TWHWLMVVAELLSLALYIVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPP 1044 (1051)
T ss_pred hhhh----------hhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 3321 126667777788888888888889998887665 45556667778888899999999999988864
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-86 Score=773.33 Aligned_cols=550 Identities=25% Similarity=0.353 Sum_probs=441.5
Q ss_pred HHhhHHHHHHHHHHHHHHhhhccccc--CCcC-ccchhHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhcccCCCeEE
Q 047874 68 EAFKDTTIIILLVCALLSLGFGIKQV--GLKE-GWFDGGSIIFAVFLVVSVSAVS----NFKQSRQFQALANESSDIRVE 140 (941)
Q Consensus 68 ~~f~~~~~~~lli~~~ls~~~~~~~~--~~~~-~~~~~~~i~~~l~~~~~i~~~~----~~~~~~~~~~l~~~~~~~~~~ 140 (941)
.+|++|..++++++++++++.+..+. +... .++++..+++.++++++++.++ +++.+++.++|.+...+.+++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 47888999999999999988764321 1100 1244566667777777777776 556666677777655444565
Q ss_pred -EEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCC---CCeEeeccEEeeeeEE
Q 047874 141 -VVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEK---NPFLLSGTKVTAGYGF 216 (941)
Q Consensus 141 -V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~---~~~l~aGt~v~~g~~~ 216 (941)
|.|||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|+++ ++ +|+||.+.+|++.
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~-V~aGT~v~~G~~~ 185 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDN-VIGGTSVASDWLE 185 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCe-eecCceeecceEE
Confidence 7799999999999999999999999999999999999987 9999999999999999876 55 9999999999999
Q ss_pred EEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCcccc
Q 047874 217 MLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKF 296 (941)
Q Consensus 217 ~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (941)
++|+++|.+|++||+.+.+..++.+++|+|.....+...+. +.++.+++++..+....
T Consensus 186 i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~-----ii~l~~~~~~~~~~~~~----------------- 243 (673)
T PRK14010 186 VEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLT-----IIFLVVILTMYPLAKFL----------------- 243 (673)
T ss_pred EEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHhhc-----------------
Confidence 99999999999999999999888899999976554433221 11222222111110000
Q ss_pred ccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEE
Q 047874 297 DDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTE 376 (941)
Q Consensus 297 ~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~ 376 (941)
.+...+...++++++++||+|+..++++...++.+|+|+|+++|+.+++|+||++|++|||||||||+|++.+.+
T Consensus 244 -----~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~ 318 (673)
T PRK14010 244 -----NFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADA 318 (673)
T ss_pred -----cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEE
Confidence 122345667788888899999999999999999999999999999999999999999999999999998877777
Q ss_pred EEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeE
Q 047874 377 FWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVIN 456 (941)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~ 456 (941)
+...+.. ...+.+..+. .|+. .+.||+++|++++++ +.+.+.... ..+
T Consensus 319 ~~~~~~~------------~~~~ll~~a~-~~~~-------------~s~~P~~~AIv~~a~-~~~~~~~~~-----~~~ 366 (673)
T PRK14010 319 FIPVKSS------------SFERLVKAAY-ESSI-------------ADDTPEGRSIVKLAY-KQHIDLPQE-----VGE 366 (673)
T ss_pred EEeCCCc------------cHHHHHHHHH-HhcC-------------CCCChHHHHHHHHHH-HcCCCchhh-----hcc
Confidence 5432110 1112233222 3331 124999999999987 555443211 123
Q ss_pred EeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeec
Q 047874 457 VEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTK 536 (941)
Q Consensus 457 ~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~ 536 (941)
..||++++|+|++.++ +. .+.||+++.++++|+. .|... ...+++..++++++|+|+++++.
T Consensus 367 ~~pF~~~~k~~gv~~~---g~---~i~kGa~~~il~~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~v~~-- 428 (673)
T PRK14010 367 YIPFTAETRMSGVKFT---TR---EVYKGAPNSMVKRVKE----AGGHI------PVDLDALVKGVSKKGGTPLVVLE-- 428 (673)
T ss_pred eeccccccceeEEEEC---CE---EEEECCHHHHHHHhhh----cCCCC------chHHHHHHHHHHhCCCeEEEEEE--
Confidence 5799999999998753 22 3459999999999974 12111 11255566788999999998652
Q ss_pred cccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccce
Q 047874 537 AAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAV 616 (941)
Q Consensus 537 ~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~ 616 (941)
|++++|+++++|++|++++++|++||++||+++|+|||++.||.++|+++|++.
T Consensus 429 ---------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~----------- 482 (673)
T PRK14010 429 ---------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR----------- 482 (673)
T ss_pred ---------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-----------
Confidence 568999999999999999999999999999999999999999999999999974
Q ss_pred ecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhcc
Q 047874 617 IEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESS 696 (941)
Q Consensus 617 ~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~a 696 (941)
+++|++|+||.++|+.+|++|+.|+|+|||.||+|+|++|||||||| +|+|.||++|
T Consensus 483 ----------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAA 539 (673)
T PRK14010 483 ----------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAA 539 (673)
T ss_pred ----------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhC
Confidence 89999999999999999999999999999999999999999999999 9999999999
Q ss_pred CEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 697 DIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAV 745 (941)
Q Consensus 697 d~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~ 745 (941)
|+++.++++..+.+++++||++|.|+++++.|.++.|+...+..+...+
T Consensus 540 DiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 540 NLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987665554333
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-89 Score=814.70 Aligned_cols=856 Identities=20% Similarity=0.245 Sum_probs=649.1
Q ss_pred HHhhcCCCcCCCCCCc---cHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcCccchhHHHHHHHHHHHHHHHHHHH
Q 047874 45 RINVFGRNRYKKPPAK---RFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNF 121 (941)
Q Consensus 45 r~~~~G~N~~~~~~~~---~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~ 121 (941)
+..+|-.|.+...|.. -+.+.+++||++..|++|++.+++++++ +++.++. +.++++++++.++++++.
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~~~~-------~~~~pl~~vl~~t~iKd~ 99 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPFNPY-------TTLVPLLFVLGITAIKDA 99 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccccCcc-------ceeeceeeeehHHHHHHH
Confidence 5568999999987764 3556799999999999999999999998 6554432 456788888899999999
Q ss_pred HHHHHHHHHhcccCCCeEEEEECCE-EeeeecCCcccCcEEEEcCCCeeecceEEEecce----EEEeeccCCCCCCcee
Q 047874 122 KQSRQFQALANESSDIRVEVVRDGR-RRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHS----LKVDESSMTGESDRVE 196 (941)
Q Consensus 122 ~~~~~~~~l~~~~~~~~~~V~R~g~-~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~----l~Vdes~LTGEs~pv~ 196 (941)
.++.++++.|+..|..+++|.|++. ++...|+++++||+|++..+|.+|||.++++++. |+|++++|+||++.+.
T Consensus 100 ~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 100 IEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred HhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 9999999999999999999999644 8999999999999999999999999999998763 7999999999998776
Q ss_pred cCC----------------------------------------------CCCeEeeccEE-eeeeEEEEEEEEcccChhh
Q 047874 197 VDE----------------------------------------------KNPFLLSGTKV-TAGYGFMLVTSVGMSTAWG 229 (941)
Q Consensus 197 k~~----------------------------------------------~~~~l~aGt~v-~~g~~~~~V~~tG~~T~~g 229 (941)
|.. .++++++|+++ .+.++.++|+.||.+|
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt--- 256 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT--- 256 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc---
Confidence 531 12357788888 4568999999999999
Q ss_pred HHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHH
Q 047874 230 EMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAA 309 (941)
Q Consensus 230 ~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (941)
|++++...++.+++++++.+++....+..+.+.++++..+...++. ...... .. ..|.... .+........+..
T Consensus 257 K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~-~~~~~~-~~-~~~~~~~---~~~~~~~~~~f~t 330 (1151)
T KOG0206|consen 257 KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWT-RQDGRH-NG-EWWYLSP---SEAAYAGFVHFLT 330 (1151)
T ss_pred hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheee-eecccc-cC-chhhhcC---chHHHHHHHHHHH
Confidence 7888888889999999999999888777777666666555433221 111000 00 0111110 0112234455777
Q ss_pred HHHHHHHHcCCchhHHHHHHHHHHHHHHhhh----------hhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEe
Q 047874 310 AVTIIVVAIPEGLPLAVTLTLAFSMKRMMKD----------HAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWL 379 (941)
Q Consensus 310 ~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~----------~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~ 379 (941)
++.++...+|.+|++.+.+.....+..+.++ .+.+|+.+..|+||+|++|++|||||||+|.|++.+|.+
T Consensus 331 ~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi 410 (1151)
T KOG0206|consen 331 FIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSI 410 (1151)
T ss_pred HHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccc
Confidence 8889999999999999999998887554433 466899999999999999999999999999999999999
Q ss_pred CCcccccccch----------------------------------hhhhHHHHHHHHHHHhccCccccccCCCC-CCccc
Q 047874 380 GKEAMKSDACS----------------------------------LELAQNLYELLQEAVGLNTTGNVYNSNSL-STSEI 424 (941)
Q Consensus 380 ~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~ 424 (941)
++..|...... ........+.+..++++||+...+..++. ...+.
T Consensus 411 ~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~ 490 (1151)
T KOG0206|consen 411 NGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYE 490 (1151)
T ss_pred cCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeee
Confidence 98776543210 00112233456678889998877763333 45778
Q ss_pred cCCccHHHHHHHHHHhcCCCCcCc------------ccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHh
Q 047874 425 TGSPTEKAILSWAMIDLGMNVDEP------------KQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILV 492 (941)
Q Consensus 425 ~~~p~e~al~~~~~~~~~~~~~~~------------~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~ 492 (941)
..+|+|.|+++.|+ ++|+.+..+ ...|+++.+.||+|.|||||||++.+++ ++.+|||||+..|.+
T Consensus 491 A~SPDE~AlV~aAr-~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g-~i~LycKGADsvI~e 568 (1151)
T KOG0206|consen 491 AESPDEAALVEAAR-ELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDG-RILLYCKGADSVIFE 568 (1151)
T ss_pred cCCCcHHHHHHHHH-hcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCC-cEEEEEcCcchhhHh
Confidence 89999999999998 888765432 3468999999999999999999998776 699999999999999
Q ss_pred hcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccch---------------------hhhhcc
Q 047874 493 MCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQ---------------------EKLEET 551 (941)
Q Consensus 493 ~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~---------------------~~~~e~ 551 (941)
++.+. .....++..+++++|+.+|+|++++|||.+++++...+ .+.+|+
T Consensus 569 rL~~~----------~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk 638 (1151)
T KOG0206|consen 569 RLSKN----------GEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEK 638 (1151)
T ss_pred hhhhc----------chHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHh
Confidence 99751 24566778889999999999999999999988776544 234699
Q ss_pred CcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC---------------------
Q 047874 552 GLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL--------------------- 610 (941)
Q Consensus 552 ~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~--------------------- 610 (941)
||+++|.+++||+++++++++|+.|++||||+|++|||+.+||.+||.+|++..++...
T Consensus 639 ~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~ 718 (1151)
T KOG0206|consen 639 DLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALK 718 (1151)
T ss_pred cchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999998764320
Q ss_pred --------------------CcccceecchhcccCCHHHH----HH--hhcCceEEEecCHHHHHHHHHHHHhC-CCEEE
Q 047874 611 --------------------NKDEAVIEGVQFRSLSAEER----IA--KIESIRVMARSSPLDKLLMVQSLKQK-GHVVA 663 (941)
Q Consensus 611 --------------------~~~~~~~~g~~~~~~~~~~~----~~--~~~~~~v~~~~~p~~K~~iv~~l~~~-g~~v~ 663 (941)
+..+.+++|+.+....+.+. .. .-++..+|||++|.||+.+|+..++. +..++
T Consensus 719 ~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TL 798 (1151)
T KOG0206|consen 719 ETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTL 798 (1151)
T ss_pred HHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEE
Confidence 13567888887765544322 22 23566799999999999999999754 88999
Q ss_pred EEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 664 VTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGA 743 (941)
Q Consensus 664 ~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 743 (941)
+||||+||++|++.|||||++++.+..+|..+||+.+.+.++..-. ++.|||+.|.|+.+++.|.||+|+.+.+++|++
T Consensus 799 AIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rL-LLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy 877 (1151)
T KOG0206|consen 799 AIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERL-LLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWY 877 (1151)
T ss_pred EeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhh-heeecceeHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999899999999999999977777766 679999999999999999999999999999999
Q ss_pred HHhcC---CCchhHHHHHHHHhhhhHHHHHHhcc---cCCCCCccCCCCCCC---CCCCccHHHHHHHHHHHHHHHHHHH
Q 047874 744 AVSSG---KVPLTAVQLLWVNLIMDTLGALALAT---EQPTNDLMSKPPVGR---SKPLITKIMWRNLISQAIYQVAILL 814 (941)
Q Consensus 744 ~~~~~---~~~l~~~~~l~~~~~~~~~~~~~l~~---~~~~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (941)
.++.+ ...+.++++.++|++++.+|.+++|. |.+.+.+|+.|-.++ +...+++..++.+...++++++++|
T Consensus 878 ~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~F 957 (1151)
T KOG0206|consen 878 QFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIF 957 (1151)
T ss_pred hhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeee
Confidence 98755 66789999999999999999999985 556666777765543 3457788888889999999998887
Q ss_pred HHHHHhhcc--cCCccccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccHHHHHHHHHHHHHHHHHHHHhhh----
Q 047874 815 TLQFKGRSI--LGVKESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKT---- 888 (941)
Q Consensus 815 ~~~~~~~~~--~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~---- 888 (941)
++.+..... ...+.....-..|.+.+...+....+.+..-..+.|. |-|+ +++.+++++.+++..+.+.
T Consensus 958 f~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT--~i~~---i~i~gSi~~~f~f~~iy~~~~~~ 1032 (1151)
T KOG0206|consen 958 FLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWT--WINH---IVIWGSILLWFVFLFIYSELTPA 1032 (1151)
T ss_pred eeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehhee--HHHH---HHHHHHHHHHHHHHHHHhccccc
Confidence 655443311 0001111111111111111111111111100111221 1122 2223333332222211111
Q ss_pred c---------ccccCCChHHHHHHHHHHHHHHHHHHHHHhccccCccc-ccchHHhh
Q 047874 889 F---------ADTERLNWGQWAACIGIAAMSWPIGFLIKCIPVSGKQL-LPINQEAS 935 (941)
Q Consensus 889 ~---------f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~ 935 (941)
+ +....-++.+|+.+++..+.+++++.+.|.+.+.-.|. ....|+.+
T Consensus 1033 ~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~ 1089 (1151)
T KOG0206|consen 1033 ISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIE 1089 (1151)
T ss_pred cCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHH
Confidence 1 11112356789999999999999999999999877777 44455444
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-84 Score=756.82 Aligned_cols=542 Identities=25% Similarity=0.361 Sum_probs=440.2
Q ss_pred HHHhhHHHHHHHHHHHHHHhhhccccc---CC---cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEE
Q 047874 67 FEAFKDTTIIILLVCALLSLGFGIKQV---GL---KEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVE 140 (941)
Q Consensus 67 ~~~f~~~~~~~lli~~~ls~~~~~~~~---~~---~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~ 140 (941)
..||++|+.++++++++++++.++.+. +. ...|.....+++.+++...++++++++.+++.+++.+...+.+++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 358899999999999999998875321 11 112333333344444445566678888888888888765555799
Q ss_pred EEECCE-EeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCCCC--eEeeccEEeeeeEEE
Q 047874 141 VVRDGR-RRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKNP--FLLSGTKVTAGYGFM 217 (941)
Q Consensus 141 V~R~g~-~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~--~l~aGt~v~~g~~~~ 217 (941)
|+|||+ +++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|++++. .+|+||.+.+|++.+
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999987 8999999999999999999999999999999976 999999999999999987532 399999999999999
Q ss_pred EEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccc
Q 047874 218 LVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFD 297 (941)
Q Consensus 218 ~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (941)
+|+++|.+|.+||+.+.+.+++.+++|++...+.+...+..+.+.++..++. +.++.+.
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~---~~~~~g~------------------ 245 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPP---FAAYSGG------------------ 245 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHH---HHHHhCc------------------
Confidence 9999999999999999999888889999988877666554433322222111 1111110
Q ss_pred cchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEE
Q 047874 298 DVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEF 377 (941)
Q Consensus 298 ~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~ 377 (941)
. ..+..++++++++|||+++...+.+...++.+++|+|+++|+.+++|+||++|++|||||||||+|+|++.++
T Consensus 246 ----~--~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~ 319 (679)
T PRK01122 246 ----A--LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEF 319 (679)
T ss_pred ----h--HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEE
Confidence 1 1567788999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEE
Q 047874 378 WLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINV 457 (941)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~ 457 (941)
+..+.. +. .+++ ..+..|+.. +.||..+|++++++.+.+.+. .+..++..+.
T Consensus 320 ~~~~~~----------~~--~~ll-~~a~~~s~~-------------s~hP~~~AIv~~a~~~~~~~~--~~~~~~~~~~ 371 (679)
T PRK01122 320 LPVPGV----------TE--EELA-DAAQLSSLA-------------DETPEGRSIVVLAKQRFNLRE--RDLQSLHATF 371 (679)
T ss_pred EeCCCC----------CH--HHHH-HHHHHhcCC-------------CCCchHHHHHHHHHhhcCCCc--hhhcccccee
Confidence 753321 01 1122 223333321 247999999999873233321 1222456678
Q ss_pred eCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeecc
Q 047874 458 EAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKA 537 (941)
Q Consensus 458 ~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~ 537 (941)
.||++.+++|++.++ + ..+.||++|.+++.|.. +|. +.++++++..++++++|.|++++|+
T Consensus 372 ~pF~s~~~~~gv~~~---g---~~~~kGa~e~il~~~~~----~g~------~~~~~~~~~~~~~a~~G~~~l~va~--- 432 (679)
T PRK01122 372 VPFSAQTRMSGVDLD---G---REIRKGAVDAIRRYVES----NGG------HFPAELDAAVDEVARKGGTPLVVAE--- 432 (679)
T ss_pred EeecCcCceEEEEEC---C---EEEEECCHHHHHHHHHh----cCC------cChHHHHHHHHHHHhCCCcEEEEEE---
Confidence 899999988887542 2 46789999999999963 121 1124567778889999999999985
Q ss_pred ccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccccee
Q 047874 538 AEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVI 617 (941)
Q Consensus 538 ~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~ 617 (941)
|++++|+++++|++|+|++++|++||++||+++|+|||++.||.++|+++|++.
T Consensus 433 --------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~------------ 486 (679)
T PRK01122 433 --------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------ 486 (679)
T ss_pred --------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE------------
Confidence 568999999999999999999999999999999999999999999999999974
Q ss_pred cchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccC
Q 047874 618 EGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSD 697 (941)
Q Consensus 618 ~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad 697 (941)
+++|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||| +|++.||++||
T Consensus 487 ---------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAAD 544 (679)
T PRK01122 487 ---------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGN 544 (679)
T ss_pred ---------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCC
Confidence 89999999999999999999999999999999999999999999999 99999999999
Q ss_pred EEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 698 IVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLT 731 (941)
Q Consensus 698 ~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~ 731 (941)
+++.++++..+.+++++||++.-.--....|++.
T Consensus 545 iVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~ 578 (679)
T PRK01122 545 MVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA 578 (679)
T ss_pred EEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH
Confidence 9999999999999999999999555555677765
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-85 Score=707.17 Aligned_cols=664 Identities=23% Similarity=0.382 Sum_probs=526.5
Q ss_pred hhCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCC
Q 047874 16 NLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGL 95 (941)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~ 95 (941)
+-+.+|++.+.|.+.. .|||++| +++|+++||+|++.++|...+.++ +.-|.+|..|..-.++++...+.- -.|.
T Consensus 19 ~~~p~eeVfeeL~~t~-~GLt~~E--~~eRlk~fG~NkleEkken~~lKF-l~Fm~~PlswVMEaAAimA~~Lan-g~~~ 93 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTR-EGLTSDE--VEERLKIFGPNKLEEKKESKFLKF-LGFMWNPLSWVMEAAAIMAIGLAN-GGGR 93 (942)
T ss_pred ccCchhhhHHHHhcCC-CCCchHH--HHHHHHhhCchhhhhhhhhHHHHH-HHHHhchHHHHHHHHHHHHHHHhc-CCCC
Confidence 5789999999999764 4999988 999999999999998776555554 455667888887777777654431 1234
Q ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEE
Q 047874 96 KEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLF 175 (941)
Q Consensus 96 ~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~l 175 (941)
.+.|.|.+.|...++++..+++++++.+......+.+-. ..+..|+|||+|.++.+++||||||+.++.||+||||++|
T Consensus 94 ~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~L-A~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRL 172 (942)
T KOG0205|consen 94 PPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGL-APKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARL 172 (942)
T ss_pred CcchhhhhhhheeeeecceeeeeeccccchHHHHHHhcc-CcccEEeecCeeeeeeccccccCceeeeccCCEecCccce
Confidence 468999999999999999999999999998888887543 3578999999999999999999999999999999999999
Q ss_pred EecceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHH
Q 047874 176 LNGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSW 255 (941)
Q Consensus 176 l~g~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~ 255 (941)
++|+-|.||+|+|||||.|+.|.+++. +|+||.|.+|++.++|++||.+|..||-+..+.. ......+++.++.+..+
T Consensus 173 l~gD~LkiDQSAlTGESLpvtKh~gd~-vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ 250 (942)
T KOG0205|consen 173 LEGDPLKIDQSALTGESLPVTKHPGDE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNF 250 (942)
T ss_pred ecCCccccchhhhcCCccccccCCCCc-eecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhH
Confidence 999999999999999999999999876 9999999999999999999999999999988876 56678899988888776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHH-HHHcCCchhHHHHHHHHHHH
Q 047874 256 IGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTII-VVAIPEGLPLAVTLTLAFSM 334 (941)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll-~~~~P~~L~~~~~~~~~~~~ 334 (941)
+...+.+-.++.. ...|.... +. .......+.++ +-.+|.++|..+++.++.++
T Consensus 251 ci~si~~g~lie~---~vmy~~q~-------R~---------------~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs 305 (942)
T KOG0205|consen 251 CICSIALGMLIEI---TVMYPIQH-------RL---------------YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (942)
T ss_pred HHHHHHHHHHHHH---Hhhhhhhh-------hh---------------hhhhhhheheeeecccccccceeeeehhhHHH
Confidence 6443322222211 12222211 11 11122233344 44599999999999999999
Q ss_pred HHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEE----EEeCCcccccccchhhhhHHHHHHHHHHHhccCc
Q 047874 335 KRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTE----FWLGKEAMKSDACSLELAQNLYELLQEAVGLNTT 410 (941)
Q Consensus 335 ~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 410 (941)
.+++++|.++|+.+++|+|+.+|++|+|||||||.|+++|.+ ++..+. +++. .+. .++..+
T Consensus 306 ~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv-----------~~D~--~~L-~A~rAs- 370 (942)
T KOG0205|consen 306 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGV-----------DKDD--VLL-TAARAS- 370 (942)
T ss_pred HHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCC-----------ChHH--HHH-HHHHHh-
Confidence 999999999999999999999999999999999999999987 333222 1111 111 111221
Q ss_pred cccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHH
Q 047874 411 GNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMI 490 (941)
Q Consensus 411 ~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i 490 (941)
..+ ..|.+|.|++...+ +..+.+..++.++..||++..||-+..+.+.+|+ .+.++||||+.|
T Consensus 371 -r~e----------n~DAID~A~v~~L~-----dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~-~~r~sKGAPeqi 433 (942)
T KOG0205|consen 371 -RKE----------NQDAIDAAIVGMLA-----DPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGN-WHRVSKGAPEQI 433 (942)
T ss_pred -hhc----------ChhhHHHHHHHhhc-----CHHHHhhCceEEeeccCCccccceEEEEECCCCC-EEEecCCChHHH
Confidence 111 24788999988654 2355667789999999999999999999887766 778899999999
Q ss_pred HhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchH
Q 047874 491 LVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVR 570 (941)
Q Consensus 491 ~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~ 570 (941)
++.|.. +.+.+++..+.+++++++|+|-+++|++..++... +....-..|+|+.-+-||+|.++.
T Consensus 434 l~l~~~-----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~----~~~g~pw~~~gllp~fdpprhdsa 498 (942)
T KOG0205|consen 434 LKLCNE-----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK----ESPGGPWEFVGLLPLFDPPRHDSA 498 (942)
T ss_pred HHHhhc-----------cCcchHHHHHHHHHHHHhcchhhhhhhhccccccc----cCCCCCcccccccccCCCCccchH
Confidence 999974 34567888999999999999999999987765432 223445679999999999999999
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchh-cccCCHHHHHHhhcCceEEEecCHHHHH
Q 047874 571 AAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQ-FRSLSAEERIAKIESIRVMARSSPLDKL 649 (941)
Q Consensus 571 ~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 649 (941)
++|++....|++|.|+|||...-++..++++|+-.+-.. +..+-|.. -+.+...+..+.+++..=|+.+.|++|.
T Consensus 499 ~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyp----ss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy 574 (942)
T KOG0205|consen 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----SSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKY 574 (942)
T ss_pred HHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCC----chhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHH
Confidence 999999999999999999999999999999998764221 11111111 1122233455566666789999999999
Q ss_pred HHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 650 LMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQ 729 (941)
Q Consensus 650 ~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 729 (941)
++|+.||++|+.|+|+|||.||+|+|+.||+|||+. .++|.|+.+||+|+..+.++.+..++..+|.+|+|++.+..|.
T Consensus 575 ~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiya 653 (942)
T KOG0205|consen 575 EIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653 (942)
T ss_pred HHHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeee
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhh
Q 047874 730 LTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMD 765 (941)
Q Consensus 730 l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~ 765 (941)
++-.+-.+ +.|+........-++|..++++.++-|
T Consensus 654 vsitiriv-~gfml~alIw~~df~pfmvliiailnd 688 (942)
T KOG0205|consen 654 VSITIRIV-FGFMLIALIWEFDFSPFMVLIIAILND 688 (942)
T ss_pred ehhHHHHH-HHHHHHHHHHHhcCCHHHHHHHHHhcC
Confidence 88776544 233322233344556666665555444
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-81 Score=724.42 Aligned_cols=546 Identities=25% Similarity=0.370 Sum_probs=444.1
Q ss_pred HHHhhHHHHHHHHHHHHHHhhhcccc--cC---CcCccchh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCe
Q 047874 67 FEAFKDTTIIILLVCALLSLGFGIKQ--VG---LKEGWFDG---GSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIR 138 (941)
Q Consensus 67 ~~~f~~~~~~~lli~~~ls~~~~~~~--~~---~~~~~~~~---~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~ 138 (941)
..||++|..++++++++++++.++.+ .+ ....|++. ..+++.+++...++++++++.+++.++|.+...+..
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 34899999999999999999876532 11 11247764 233344455566777888899999999987655556
Q ss_pred EEEEE-CCEEeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCCCC--eEeeccEEeeeeE
Q 047874 139 VEVVR-DGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKNP--FLLSGTKVTAGYG 215 (941)
Q Consensus 139 ~~V~R-~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~--~l~aGt~v~~g~~ 215 (941)
++|+| ||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|++++. .+|+||.+.+|++
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~ 185 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA-SVDESAITGESAPVIKESGGDFASVTGGTRILSDWL 185 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccE-EEEcccccCCCCceeecCCCCcceeecCcEEEeeEE
Confidence 88886 8999999999999999999999999999999999975 999999999999999998753 3999999999999
Q ss_pred EEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccc
Q 047874 216 FMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTK 295 (941)
Q Consensus 216 ~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (941)
.++|+++|.+|.+||+.+.+..++.+++|+|...+.+..++..+.+.+ ++.++.... +.
T Consensus 186 ~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~---~~~~~~~~~-~~----------------- 244 (675)
T TIGR01497 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLV---TATLWPFAA-YG----------------- 244 (675)
T ss_pred EEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH---HHHHHHHHH-hc-----------------
Confidence 999999999999999999999888889999988777655443322211 122211111 11
Q ss_pred cccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEE
Q 047874 296 FDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVT 375 (941)
Q Consensus 296 ~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~ 375 (941)
.....+..++++++++|||+++...+.....++.+++|+|+++|+.+++|++|++|++|||||||||+|+|++.
T Consensus 245 ------~~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~ 318 (675)
T TIGR01497 245 ------GNAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLAS 318 (675)
T ss_pred ------ChhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEE
Confidence 00123566788999999999888777777789999999999999999999999999999999999999999999
Q ss_pred EEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCccccccee
Q 047874 376 EFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVI 455 (941)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l 455 (941)
+++..+.. + ..+++. .++.|+. .+.||.++|++++++ +.+.+... ..++..
T Consensus 319 ~~~~~~~~----------~--~~~ll~-~aa~~~~-------------~s~hP~a~Aiv~~a~-~~~~~~~~--~~~~~~ 369 (675)
T TIGR01497 319 EFIPAQGV----------D--EKTLAD-AAQLASL-------------ADDTPEGKSIVILAK-QLGIREDD--VQSLHA 369 (675)
T ss_pred EEEecCCC----------c--HHHHHH-HHHHhcC-------------CCCCcHHHHHHHHHH-HcCCCccc--cccccc
Confidence 98753211 0 012222 2223321 135899999999988 55554322 123456
Q ss_pred EEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeee
Q 047874 456 NVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHT 535 (941)
Q Consensus 456 ~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~ 535 (941)
+..||++.++++++.+. ++ ..+.||++|.+++.|.. +|.. .+..+++..++++++|.|++++|+
T Consensus 370 ~~~pf~~~~~~sg~~~~--~g---~~~~kGa~e~i~~~~~~----~g~~------~~~~~~~~~~~~a~~G~r~l~va~- 433 (675)
T TIGR01497 370 TFVEFTAQTRMSGINLD--NG---RMIRKGAVDAIKRHVEA----NGGH------IPTDLDQAVDQVARQGGTPLVVCE- 433 (675)
T ss_pred eEEEEcCCCcEEEEEEe--CC---eEEEECCHHHHHHHHHh----cCCC------CcHHHHHHHHHHHhCCCeEEEEEE-
Confidence 78899999887776543 22 46789999999988852 1211 123466777889999999999996
Q ss_pred ccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccc
Q 047874 536 KAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEA 615 (941)
Q Consensus 536 ~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~ 615 (941)
|.+++|+++++|++||+++++|++|+++|++++|+|||+..+|.++|+++|++.
T Consensus 434 ----------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---------- 487 (675)
T TIGR01497 434 ----------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---------- 487 (675)
T ss_pred ----------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----------
Confidence 347999999999999999999999999999999999999999999999999974
Q ss_pred eecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhc
Q 047874 616 VIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKES 695 (941)
Q Consensus 616 ~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ 695 (941)
++++++|++|.++|+.+|++|+.|+|+|||.||+|||++||+||||+ ++++.++++
T Consensus 488 -----------------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akea 543 (675)
T TIGR01497 488 -----------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEA 543 (675)
T ss_pred -----------------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHh
Confidence 89999999999999999999999999999999999999999999999 899999999
Q ss_pred cCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 696 SDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVA 735 (941)
Q Consensus 696 ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~ 735 (941)
||+++.++++..+.+++++||+++-+-.....|++..++.
T Consensus 544 adivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 544 ANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred CCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 9999999999999999999999999999999999876654
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-80 Score=681.46 Aligned_cols=832 Identities=19% Similarity=0.231 Sum_probs=597.7
Q ss_pred HHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCcCccc
Q 047874 21 NQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLKEGWF 100 (941)
Q Consensus 21 ~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~~~~~ 100 (941)
++-...++.+ +|+. ++.++++-..+||+|+.+.+. +.|..++.+.-..|++.++.++..+++.-. +||
T Consensus 151 ~~~~g~~~k~--~G~~-~~~~i~~a~~~~G~N~fdi~v-PtF~eLFkE~A~aPfFVFQVFcvgLWCLDe--------yWY 218 (1160)
T KOG0209|consen 151 DEPFGYFQKS--TGHE-EESEIKLAKHKYGKNKFDIVV-PTFSELFKEHAVAPFFVFQVFCVGLWCLDE--------YWY 218 (1160)
T ss_pred CCcchhhhhc--cCcc-hHHHHHHHHHHhcCCccccCC-ccHHHHHHHhccCceeeHhHHhHHHHHhHH--------HHH
Confidence 3334444443 5777 445677777889999999874 489999999999999999999998887653 687
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-CCeEEEEECCEEeeeecCCcccCcEEEEcC---CCeeecceEEE
Q 047874 101 DGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESS-DIRVEVVRDGRRRGLSIFDVVVGEVVCLKT---GDQIPADGLFL 176 (941)
Q Consensus 101 ~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~-~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~---G~~iPaD~~ll 176 (941)
.+... ++..+.+++.--+++.+....+.++.+ +..+.|+|+++|+.+.++||.|||+|.+.. ...||||.+|+
T Consensus 219 ySlFt---LfMli~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL 295 (1160)
T KOG0209|consen 219 YSLFT---LFMLIAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLL 295 (1160)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEE
Confidence 66443 344455566666667777777766654 457999999999999999999999999976 77899999999
Q ss_pred ecceEEEeeccCCCCCCceecCC----------------CCCeEeeccEEee-------------eeEEEEEEEEcccCh
Q 047874 177 NGHSLKVDESSMTGESDRVEVDE----------------KNPFLLSGTKVTA-------------GYGFMLVTSVGMSTA 227 (941)
Q Consensus 177 ~g~~l~Vdes~LTGEs~pv~k~~----------------~~~~l~aGt~v~~-------------g~~~~~V~~tG~~T~ 227 (941)
.|++ .|||++|||||.|.-|++ +..++|.||++++ |-+.+.|++||.+|.
T Consensus 296 ~Gsc-iVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTS 374 (1160)
T KOG0209|consen 296 RGSC-IVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETS 374 (1160)
T ss_pred ecce-eechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEecccccc
Confidence 9987 899999999999998873 3458999999964 668999999999999
Q ss_pred hhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCC-cccccCCccccccchhhHHHH
Q 047874 228 WGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMG-KREFVGGKTKFDDVMNSVINI 306 (941)
Q Consensus 228 ~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 306 (941)
.|++.+.+....++-|.-.+.. ..++.+.+ +|++...+|.+.. ...+. + +=.+.
T Consensus 375 QGkLvRtilf~aervTaNn~Et----f~FILFLl-----VFAiaAa~Yvwv~-Gskd~~R---------------srYKL 429 (1160)
T KOG0209|consen 375 QGKLVRTILFSAERVTANNRET----FIFILFLL-----VFAIAAAGYVWVE-GSKDPTR---------------SRYKL 429 (1160)
T ss_pred CCceeeeEEecceeeeeccHHH----HHHHHHHH-----HHHHHhhheEEEe-cccCcch---------------hhhhe
Confidence 9999998877665555433321 12222222 2222222221111 11111 1 22345
Q ss_pred HHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCccccc
Q 047874 307 IAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKS 386 (941)
Q Consensus 307 ~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~ 386 (941)
+.-++.++...+|+-||+-++++...+...++|.+++|..+-++.-.|++|+.|||||||||+..|.|.++.-.......
T Consensus 430 ~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~ 509 (1160)
T KOG0209|consen 430 FLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGA 509 (1160)
T ss_pred eeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCccc
Confidence 66677788899999999999999999999999999999999999999999999999999999999999987642221111
Q ss_pred ccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCC-c----CcccccceeEEeCCC
Q 047874 387 DACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNV-D----EPKQYCTVINVEAFN 461 (941)
Q Consensus 387 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~-~----~~~~~~~~l~~~~F~ 461 (941)
-........+..+ .++.||+-...+ ....|||.|+|.+++..|.....- . ...+..++++.+.|+
T Consensus 510 ~~~~s~~p~~t~~----vlAscHsLv~le------~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFs 579 (1160)
T KOG0209|consen 510 LTPASKAPNETVL----VLASCHSLVLLE------DKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFS 579 (1160)
T ss_pred ccchhhCCchHHH----HHHHHHHHHHhc------CcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHH
Confidence 1111122222222 233444422221 137899999999997643322111 1 112246778999999
Q ss_pred CCCCcEEEEEEecCC---ceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccc
Q 047874 462 SEKKRSGVLMKRINE---KVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAA 538 (941)
Q Consensus 462 s~~k~~sviv~~~~~---~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~ 538 (941)
|..|||||++..... .++++.+|||||.|.++-.+ .+..+++...+++++|.||+|++||++.
T Consensus 580 SaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d--------------vP~dY~~iYk~ytR~GsRVLALg~K~l~ 645 (1160)
T KOG0209|consen 580 SALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD--------------VPKDYDEIYKRYTRQGSRVLALGYKPLG 645 (1160)
T ss_pred HHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh--------------CchhHHHHHHHHhhccceEEEEeccccc
Confidence 999999999875432 36889999999999876643 3466788899999999999999999987
Q ss_pred c----ccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCC------
Q 047874 539 E----ADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDV------ 608 (941)
Q Consensus 539 ~----~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~------ 608 (941)
. ...+..++..|+||+|.|++.|.-|+|+|++++|+.|++++++++|+||||+.||.++|+++||.....
T Consensus 646 ~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~ 725 (1160)
T KOG0209|consen 646 DMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLP 725 (1160)
T ss_pred ccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccC
Confidence 3 233355778899999999999999999999999999999999999999999999999999999975411
Q ss_pred ------C-----------------------CCcccceecchhcccCCH-HHHHHhhcCceEEEecCHHHHHHHHHHHHhC
Q 047874 609 ------D-----------------------LNKDEAVIEGVQFRSLSA-EERIAKIESIRVMARSSPLDKLLMVQSLKQK 658 (941)
Q Consensus 609 ------~-----------------------~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~ 658 (941)
+ .+.++.+++|..++.+.. +.+.+.+..+.||||+.|.||..++..+++.
T Consensus 726 ~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~ 805 (1160)
T KOG0209|consen 726 EEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL 805 (1160)
T ss_pred ccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc
Confidence 0 023567788888887654 3567778889999999999999999999999
Q ss_pred CCEEEEEcCCccCHHHHHhCCccEEecCCCcH------------------------------------------------
Q 047874 659 GHVVAVTGDGTNDAPALRAADIGLSMGIQGTE------------------------------------------------ 690 (941)
Q Consensus 659 g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~------------------------------------------------ 690 (941)
|+.++|||||+||+.|||+||||||+-.+..+
T Consensus 806 Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 885 (1160)
T KOG0209|consen 806 GYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTR 885 (1160)
T ss_pred CeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHH
Confidence 99999999999999999999999998623221
Q ss_pred ----------------------HHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 047874 691 ----------------------VAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSG 748 (941)
Q Consensus 691 ----------------------~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~ 748 (941)
.|.-+|.+.-...+.+++-++|++||++.-+.-|.+... +-|..... .-.+.++.-
T Consensus 886 e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKIL-ALN~LisA-YslSvlyld 963 (1160)
T KOG0209|consen 886 ERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKIL-ALNCLISA-YSLSVLYLD 963 (1160)
T ss_pred HHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHHH-HHHHHHHH-HHHHHhhhc
Confidence 112234444444568889999999999998777766543 33432211 112223333
Q ss_pred CCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhccc----
Q 047874 749 KVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSIL---- 824 (941)
Q Consensus 749 ~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 824 (941)
..-++..|...--+++. .-.+.++..+|-+.+-++.|. .++++...+..++.|-.+....++++.-......
T Consensus 964 GVKfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~ 1039 (1160)
T KOG0209|consen 964 GVKFGDTQATISGLLLA-ACFLFISRSKPLETLSKERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEE 1039 (1160)
T ss_pred CceecchhHhHHHHHHH-HHHhheecCCchhhHhhcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCccc
Confidence 44555566554444332 224555678888888888774 4678776666666555554444433322111111
Q ss_pred ------CCccccchhHHHHHHHHHHHHH-HhhhccCCcccccccCcccHHHHHHHHHHHHHHHHHH----HHhhhccccc
Q 047874 825 ------GVKESVKDTMIFNTFVLCQIFN-EFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMV----EFLKTFADTE 893 (941)
Q Consensus 825 ------~~~~~~~~t~~f~~lv~~~~~~-~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~~f~~~ 893 (941)
.++++..+|.+|..-...|+.. ++|++ ..||..++..|+.++++++.+..+.+... +=++.-|...
T Consensus 1040 ~vdl~~~F~PsllNt~vyiisl~~QvsTFAVNY~---G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV 1116 (1160)
T KOG0209|consen 1040 KVDLEEKFSPSLLNTTVYIISLAQQVSTFAVNYQ---GRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFELV 1116 (1160)
T ss_pred ccChhcccChhhhhhHHHHHHHHHHHHHhhhhcc---CcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhheeee
Confidence 1235667788887777777765 56655 46888899999988888877665544443 2357778888
Q ss_pred CCCh----HHHHHHHHHHHHHHHHHHHHHhccccCcc
Q 047874 894 RLNW----GQWAACIGIAAMSWPIGFLIKCIPVSGKQ 926 (941)
Q Consensus 894 ~l~~----~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 926 (941)
+++- ....+.++--+++++++.+.|++-...+|
T Consensus 1117 ~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f~~~k~ 1153 (1160)
T KOG0209|consen 1117 DMPQDFKIKLLAVLVLDFVLCYLVERVLKFFFGDHKP 1153 (1160)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCc
Confidence 8763 22345566667788899999987764443
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-77 Score=696.01 Aligned_cols=485 Identities=30% Similarity=0.433 Sum_probs=409.9
Q ss_pred HHHHHHHHHhcccCCCeEEEEE-CCEEeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCC
Q 047874 122 KQSRQFQALANESSDIRVEVVR-DGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEK 200 (941)
Q Consensus 122 ~~~~~~~~l~~~~~~~~~~V~R-~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~ 200 (941)
+..+..++|.+. .++++++++ ||++++||.+||++||+|+|+|||+||+||++++|++ .||||++||||.|+.|.++
T Consensus 197 ra~~ai~~L~~l-~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~~G 274 (713)
T COG2217 197 RARRAIRALLDL-APKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKKPG 274 (713)
T ss_pred HHHHHHHHHHcc-CCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecCCC
Confidence 333444445433 467887776 5558999999999999999999999999999999999 9999999999999999998
Q ss_pred CCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 047874 201 NPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNT 280 (941)
Q Consensus 201 ~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (941)
+. +++||.+.+|.....|+++|.+|.+++|.+.+.+++..++|.|+..|+++.++++.++.+++++|++|.+ .+..
T Consensus 275 d~-V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~---~~~~ 350 (713)
T COG2217 275 DE-VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPL---FGGG 350 (713)
T ss_pred CE-EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHH---hcCC
Confidence 66 9999999999999999999999999999999999999999999999999999999999999888886432 2210
Q ss_pred CCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEE
Q 047874 281 RDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTIC 360 (941)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~ 360 (941)
++...+..++++++++|||+|.+++|++...+..+.+++|+++|+.+++|.++++|+++
T Consensus 351 ---------------------~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvv 409 (713)
T COG2217 351 ---------------------DWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVV 409 (713)
T ss_pred ---------------------cHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEE
Confidence 45668899999999999999999999999999999999999999999999999999999
Q ss_pred eCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHh
Q 047874 361 TDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMID 440 (941)
Q Consensus 361 ~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~ 440 (941)
||||||||+|+|+|.++...+. ++ .+.|..+.++. ..+.||..+|+++++. +
T Consensus 410 FDKTGTLT~G~p~v~~v~~~~~--~e-----------~~~L~laAalE--------------~~S~HPiA~AIv~~a~-~ 461 (713)
T COG2217 410 FDKTGTLTEGKPEVTDVVALDG--DE-----------DELLALAAALE--------------QHSEHPLAKAIVKAAA-E 461 (713)
T ss_pred EeCCCCCcCCceEEEEEecCCC--CH-----------HHHHHHHHHHH--------------hcCCChHHHHHHHHHH-h
Confidence 9999999999999999886543 11 23343343322 2367999999999887 4
Q ss_pred cCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHH
Q 047874 441 LGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQ 520 (941)
Q Consensus 441 ~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~ 520 (941)
.+.. .. +....+| .++-.+. .++..+ .-|++..+.+.-.. .+ . ..+..+
T Consensus 462 ~~~~--~~----~~~~~i~---G~Gv~~~----v~g~~v---~vG~~~~~~~~~~~----------~~----~-~~~~~~ 510 (713)
T COG2217 462 RGLP--DV----EDFEEIP---GRGVEAE----VDGERV---LVGNARLLGEEGID----------LP----L-LSERIE 510 (713)
T ss_pred cCCC--Cc----cceeeec---cCcEEEE----ECCEEE---EEcCHHHHhhcCCC----------cc----c-hhhhHH
Confidence 4311 11 1112222 2232222 244334 44998887542211 01 0 345566
Q ss_pred HHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH
Q 047874 521 EMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIE 600 (941)
Q Consensus 521 ~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~ 600 (941)
.+..+|..++.++. |..++|+++++|++|++++++|++||+.|++++|+|||+..+|+++|++
T Consensus 511 ~~~~~G~t~v~va~-----------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~ 573 (713)
T COG2217 511 ALESEGKTVVFVAV-----------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE 573 (713)
T ss_pred HHHhcCCeEEEEEE-----------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH
Confidence 77788887777765 4579999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc
Q 047874 601 CGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI 680 (941)
Q Consensus 601 ~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v 680 (941)
+||+. +++.+.|++|.++|+.+|++|++|+|+|||.||+|+|.+|||
T Consensus 574 lGId~---------------------------------v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdV 620 (713)
T COG2217 574 LGIDE---------------------------------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADV 620 (713)
T ss_pred cChHh---------------------------------heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCe
Confidence 99975 899999999999999999999999999999999999999999
Q ss_pred cEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 681 GLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGA 743 (941)
Q Consensus 681 gIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 743 (941)
||||| +|+|+|+++||++++++++..++++++.+|+++++|++|+.|+|.||++++++..+.
T Consensus 621 GiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 621 GIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred eEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999 799999999999999999999999999999999999999999999999998887765
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-74 Score=688.13 Aligned_cols=503 Identities=25% Similarity=0.335 Sum_probs=418.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEec
Q 047874 99 WFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNG 178 (941)
Q Consensus 99 ~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g 178 (941)
|.++..+++.+++.-.++.+.+.+.++..+++.+. .+.+++|+|||++++|++++|+|||+|++++||+|||||+|++|
T Consensus 206 ~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l-~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 206 TAEAAMVLLLFLIGERLEGYAASRARRGVSALMAL-VPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 44444444444444455555666666666777654 56789999999999999999999999999999999999999999
Q ss_pred ceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHH
Q 047874 179 HSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGK 258 (941)
Q Consensus 179 ~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~ 258 (941)
+. .||||+|||||.|+.|..++ .+|+||.+.+|.++++|+++|.+|.+||+.+.+.+++.+++|+++.+++++.++++
T Consensus 285 ~~-~vdes~lTGEs~Pv~k~~Gd-~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~ 362 (741)
T PRK11033 285 FA-SFDESALTGESIPVERATGE-KVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTP 362 (741)
T ss_pred cE-EeecccccCCCCCEecCCCC-eeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHH
Confidence 86 99999999999999999875 49999999999999999999999999999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHh
Q 047874 259 IGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMM 338 (941)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~ 338 (941)
+++.+++++++++.+. .+. ++...+..++++++++|||+|.+++|++...+..+++
T Consensus 363 ~v~~~a~~~~~~~~~~--~~~----------------------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aa 418 (741)
T PRK11033 363 AIMLVALLVILVPPLL--FAA----------------------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAA 418 (741)
T ss_pred HHHHHHHHHHHHHHHH--ccC----------------------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHH
Confidence 9999999888775321 111 3445678899999999999999999999999999999
Q ss_pred hhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCC
Q 047874 339 KDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNS 418 (941)
Q Consensus 339 ~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 418 (941)
|+|+++|+.+++|+|+++|++|||||||||+|+|+|.+++..+.. + .+ +++..+....
T Consensus 419 r~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-~--------~~---~~l~~aa~~e---------- 476 (741)
T PRK11033 419 RRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI-S--------ES---ELLALAAAVE---------- 476 (741)
T ss_pred HCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC-C--------HH---HHHHHHHHHh----------
Confidence 999999999999999999999999999999999999998754321 1 11 2222222111
Q ss_pred CCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEE-EEEE-ecCCceEEEEecCcHHHHHhhccc
Q 047874 419 LSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSG-VLMK-RINEKVFHTHWKGAAEMILVMCSH 496 (941)
Q Consensus 419 ~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~s-viv~-~~~~~~~~~~~KGa~e~i~~~c~~ 496 (941)
..+.||.++|+++++. +.+.+ +||.++++.+. .-++ ..++..+. .|+++.+.+
T Consensus 477 ----~~s~hPia~Ai~~~a~-~~~~~-------------~~~~~~~~~~~g~Gv~~~~~g~~~~---ig~~~~~~~---- 531 (741)
T PRK11033 477 ----QGSTHPLAQAIVREAQ-VRGLA-------------IPEAESQRALAGSGIEGQVNGERVL---ICAPGKLPP---- 531 (741)
T ss_pred ----cCCCCHHHHHHHHHHH-hcCCC-------------CCCCcceEEEeeEEEEEEECCEEEE---Eecchhhhh----
Confidence 1256999999999987 44432 34555555442 2222 22443333 478777633
Q ss_pred ccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHH
Q 047874 497 YYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESC 576 (941)
Q Consensus 497 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l 576 (941)
++ +.+.+..+++..+|++++++++ |.+++|+++++|++|++++++|++|
T Consensus 532 ----------~~----~~~~~~~~~~~~~g~~~v~va~-----------------~~~~~g~i~l~d~~r~~a~~~i~~L 580 (741)
T PRK11033 532 ----------LA----DAFAGQINELESAGKTVVLVLR-----------------NDDVLGLIALQDTLRADARQAISEL 580 (741)
T ss_pred ----------cc----HHHHHHHHHHHhCCCEEEEEEE-----------------CCEEEEEEEEecCCchhHHHHHHHH
Confidence 11 2234445678899999999986 4589999999999999999999999
Q ss_pred HhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHH
Q 047874 577 RNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLK 656 (941)
Q Consensus 577 ~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~ 656 (941)
+++|++++|+|||+..++.++|+++||. .+++..|++|.++|+.++
T Consensus 581 ~~~gi~~~llTGd~~~~a~~ia~~lgi~----------------------------------~~~~~~p~~K~~~v~~l~ 626 (741)
T PRK11033 581 KALGIKGVMLTGDNPRAAAAIAGELGID----------------------------------FRAGLLPEDKVKAVTELN 626 (741)
T ss_pred HHCCCEEEEEcCCCHHHHHHHHHHcCCC----------------------------------eecCCCHHHHHHHHHHHh
Confidence 9999999999999999999999999995 467789999999999999
Q ss_pred hCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 657 QKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAA 736 (941)
Q Consensus 657 ~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~ 736 (941)
+. +.|+|+|||.||+|||++|||||||| ++++.++++||+++.++++.++.++++.||++++||++|+.|++.||+++
T Consensus 627 ~~-~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~ 704 (741)
T PRK11033 627 QH-APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIF 704 (741)
T ss_pred cC-CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65 58999999999999999999999999 89999999999999999999999999999999999999999999999988
Q ss_pred HHHHHH
Q 047874 737 LVINFG 742 (941)
Q Consensus 737 ~~~~~~ 742 (941)
+.+.++
T Consensus 705 i~~a~~ 710 (741)
T PRK11033 705 LVTTLL 710 (741)
T ss_pred HHHHHH
Confidence 776654
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-72 Score=658.07 Aligned_cols=477 Identities=37% Similarity=0.567 Sum_probs=418.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-ccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeecc
Q 047874 109 VFLVVSVSAVSNFKQSRQFQALAN-ESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESS 187 (941)
Q Consensus 109 l~~~~~i~~~~~~~~~~~~~~l~~-~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~ 187 (941)
+++...++.+.+++.++..+++.+ ..++.+++|+|+| ++.|++++|+|||+|.+++||+|||||++++|++ .||||+
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vdes~ 83 (499)
T TIGR01494 6 VLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVDESN 83 (499)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEEccc
Confidence 445667778888888888888865 3577899999999 9999999999999999999999999999999975 999999
Q ss_pred CCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHH-HHHHHHHHHHHHH
Q 047874 188 MTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLT-SWIGKIGLTVAVL 266 (941)
Q Consensus 188 LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~ 266 (941)
|||||.|+.|.+++. +++||.+.+|...+.|+.+|.+|..+++...+......++++++..+++. .++.++.+.++++
T Consensus 84 LTGEs~pv~k~~g~~-v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~ 162 (499)
T TIGR01494 84 LTGESVPVLKTAGDA-VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALA 162 (499)
T ss_pred ccCCCCCeeeccCCc-cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998655 99999999999999999999999999999988877777899999999999 7887777777777
Q ss_pred HHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccC
Q 047874 267 VLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRK 346 (941)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~ 346 (941)
+++.++..+. .. . ++...+..++++++++|||+|++++++++..+..+++++|+++|+
T Consensus 163 ~~~~~~~~~~-~~--~-------------------~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~ 220 (499)
T TIGR01494 163 VFLFWAIGLW-DP--N-------------------SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRS 220 (499)
T ss_pred HHHHHHHHHc-cc--c-------------------cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEec
Confidence 6666543210 00 0 255778899999999999999999999999999999999999999
Q ss_pred chhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccC
Q 047874 347 LSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITG 426 (941)
Q Consensus 347 ~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (941)
++++|+||++|++|||||||||+|+|++.+++..+. ++.++
T Consensus 221 ~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~---------------------------------------~~~s~ 261 (499)
T TIGR01494 221 LNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG---------------------------------------EYLSG 261 (499)
T ss_pred hhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC---------------------------------------CcCCC
Confidence 999999999999999999999999999999875321 12367
Q ss_pred CccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEee
Q 047874 427 SPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRI 506 (941)
Q Consensus 427 ~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~ 506 (941)
||.|.|+++++. .. .+...||++.+++|+++++..++ .++||+++.+.+.|.+
T Consensus 262 hp~~~ai~~~~~-~~------------~~~~~~f~~~~~~~~~~~~~~~~----~~~~G~~~~i~~~~~~---------- 314 (499)
T TIGR01494 262 HPDERALVKSAK-WK------------ILNVFEFSSVRKRMSVIVRGPDG----TYVKGAPEFVLSRVKD---------- 314 (499)
T ss_pred ChHHHHHHHHhh-hc------------CcceeccCCCCceEEEEEecCCc----EEEeCCHHHHHHhhHH----------
Confidence 999999999886 21 12467999999999999875322 3689999999988852
Q ss_pred CCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEE
Q 047874 507 LDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMV 586 (941)
Q Consensus 507 l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~ 586 (941)
+.+..++++.+|+|++++|++. +++|++.++|++|++++++|+.|+++|++++|+
T Consensus 315 --------~~~~~~~~~~~g~~~~~~a~~~-----------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~l 369 (499)
T TIGR01494 315 --------LEEKVKELAQSGLRVLAVASKE-----------------TLLGLLGLEDPLRDDAKETISELREAGIRVIML 369 (499)
T ss_pred --------HHHHHHHHHhCCCEEEEEEECC-----------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEE
Confidence 1223345778999999999743 699999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEc
Q 047874 587 TGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTG 666 (941)
Q Consensus 587 TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iG 666 (941)
|||+..+|..+|+++|+ +++++|++|.++|+.+|+.|+.|+|+|
T Consensus 370 tGD~~~~a~~ia~~lgi------------------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vG 413 (499)
T TIGR01494 370 TGDNVLTAKAIAKELGI------------------------------------FARVTPEEKAALVEALQKKGRVVAMTG 413 (499)
T ss_pred cCCCHHHHHHHHHHcCc------------------------------------eeccCHHHHHHHHHHHHHCCCEEEEEC
Confidence 99999999999999985 578999999999999999999999999
Q ss_pred CCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 667 DGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGA 743 (941)
Q Consensus 667 Dg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 743 (941)
||.||+||+++|||||||+ ++++||+++.++++..+..++++||++++++++++.|.+++|++.+++++++
T Consensus 414 Dg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~ 484 (499)
T TIGR01494 414 DGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALL 484 (499)
T ss_pred CChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999997 6889999999999999999999999999999999999999999987777653
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-72 Score=637.34 Aligned_cols=563 Identities=25% Similarity=0.354 Sum_probs=439.6
Q ss_pred ccchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCE-EeeeecCCcccCcEEEEcCCCeeecceEE
Q 047874 98 GWFDGGSIIFAVFLV-VSVSAVSNFKQSRQFQALANESSDIRVEVVRDGR-RRGLSIFDVVVGEVVCLKTGDQIPADGLF 175 (941)
Q Consensus 98 ~~~~~~~i~~~l~~~-~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~-~~~i~~~~Lv~GDiI~l~~G~~iPaD~~l 175 (941)
.+||...+++.++.. -.++....++....+.+|... .+.++.++.+|+ +++|+.+.+++||+|.|.||++||+||++
T Consensus 339 tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl-~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~V 417 (951)
T KOG0207|consen 339 TFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSL-APSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVV 417 (951)
T ss_pred hhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhc-CcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEE
Confidence 455555555444332 122222222333334444433 456888999886 88999999999999999999999999999
Q ss_pred EecceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHH
Q 047874 176 LNGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSW 255 (941)
Q Consensus 176 l~g~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~ 255 (941)
++|++ +||||.+|||+.|+.|+.++ .+.+||.+..|.....++++|.+|.+++|.+.+.+++..++|.|+.+|+++.+
T Consensus 418 v~Gss-~VDEs~iTGEs~PV~Kk~gs-~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~y 495 (951)
T KOG0207|consen 418 VDGSS-EVDESLITGESMPVPKKKGS-TVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGY 495 (951)
T ss_pred EeCce-eechhhccCCceecccCCCC-eeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhc
Confidence 99998 99999999999999999865 49999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHH
Q 047874 256 IGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMK 335 (941)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~ 335 (941)
+.+.+++++++++++|++..... ..+ ... +...+..+|..++++++++|||+|.++.|++...+..
T Consensus 496 FvP~Vi~lS~~t~~~w~~~g~~~---~~~-~~~----------~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatg 561 (951)
T KOG0207|consen 496 FVPVVIVLSLATFVVWILIGKIV---FKY-PRS----------FFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATG 561 (951)
T ss_pred CCchhhHHHHHHHHHHHHHcccc---ccC-cch----------hhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEec
Confidence 99999999999999876532211 000 011 1136778899999999999999999999999999999
Q ss_pred HHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCcccccc
Q 047874 336 RMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYN 415 (941)
Q Consensus 336 ~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 415 (941)
..+++|+++|..+.+|.+.++++|+||||||||+|++.|.++....+... ..+.+....+..
T Consensus 562 vgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~-----------~~e~l~~v~a~E------- 623 (951)
T KOG0207|consen 562 VGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPIS-----------LKEALALVAAME------- 623 (951)
T ss_pred hhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCccc-----------HHHHHHHHHHHh-------
Confidence 99999999999999999999999999999999999999999877654311 112222222111
Q ss_pred CCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcc
Q 047874 416 SNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCS 495 (941)
Q Consensus 416 ~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~ 495 (941)
..+.||..+|+++|++ +..... ..-..+....|..+.....+.+ ++.+ .+-|.-+.+...-.
T Consensus 624 -------s~SeHPig~AIv~yak-~~~~~~----~~~~~~~~~~~pg~g~~~~~~~---~~~~---i~iGN~~~~~r~~~ 685 (951)
T KOG0207|consen 624 -------SGSEHPIGKAIVDYAK-EKLVEP----NPEGVLSFEYFPGEGIYVTVTV---DGNE---VLIGNKEWMSRNGC 685 (951)
T ss_pred -------cCCcCchHHHHHHHHH-hccccc----CccccceeecccCCCcccceEE---eeeE---EeechHHHHHhcCC
Confidence 1256999999999998 443111 1111222222322222211221 2222 34588777754221
Q ss_pred cccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHH
Q 047874 496 HYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVES 575 (941)
Q Consensus 496 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~ 575 (941)
. ..+.+++..++..+.|..+..++. |-++.|++.++|++|+|+..+|+.
T Consensus 686 ~--------------~~~~i~~~~~~~e~~g~tvv~v~v-----------------n~~l~gv~~l~D~vr~~a~~av~~ 734 (951)
T KOG0207|consen 686 S--------------IPDDILDALTESERKGQTVVYVAV-----------------NGQLVGVFALEDQVRPDAALAVAE 734 (951)
T ss_pred C--------------CchhHHHhhhhHhhcCceEEEEEE-----------------CCEEEEEEEeccccchhHHHHHHH
Confidence 1 123467777788889998888876 568999999999999999999999
Q ss_pred HHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHH
Q 047874 576 CRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSL 655 (941)
Q Consensus 576 l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l 655 (941)
||+.|++++|+||||..+|+++|+++|++. |+++..|+||.+.|+.+
T Consensus 735 Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~---------------------------------V~aev~P~~K~~~Ik~l 781 (951)
T KOG0207|consen 735 LKSMGIKVVMLTGDNDAAARSVAQQVGIDN---------------------------------VYAEVLPEQKAEKIKEI 781 (951)
T ss_pred HHhcCceEEEEcCCCHHHHHHHHHhhCcce---------------------------------EEeccCchhhHHHHHHH
Confidence 999999999999999999999999999764 99999999999999999
Q ss_pred HhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 656 KQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVA 735 (941)
Q Consensus 656 ~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~ 735 (941)
|+++..|+|+|||.||+|+|.+|||||+|| .+++.|.++||+++++|++.+++.+|..+|++.+|+|.|+.|++.||+.
T Consensus 782 q~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~ 860 (951)
T KOG0207|consen 782 QKNGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLV 860 (951)
T ss_pred HhcCCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC--CCchhHHHHHHHHhhhhHHHHHHhcc-cCCC
Q 047874 736 ALVINFGAAVSSG--KVPLTAVQLLWVNLIMDTLGALALAT-EQPT 778 (941)
Q Consensus 736 ~~~~~~~~~~~~~--~~~l~~~~~l~~~~~~~~~~~~~l~~-~~~~ 778 (941)
.++++.+.++..+ -+|.-+.-.+..+.+...+.++.|-. .+|.
T Consensus 861 ~IpIAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~ 906 (951)
T KOG0207|consen 861 GIPIAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKRYKKPT 906 (951)
T ss_pred hhhhheecccCCccccCchHHHHHHHhhhHHHhhhHHHHhhccccc
Confidence 9988877665555 12222223333344444444444433 4443
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-71 Score=649.38 Aligned_cols=525 Identities=28% Similarity=0.427 Sum_probs=427.0
Q ss_pred HHHHHHHHhhhcccccCCcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECC-EEeeeecCCcc
Q 047874 78 LLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDG-RRRGLSIFDVV 156 (941)
Q Consensus 78 lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g-~~~~i~~~~Lv 156 (941)
..++++++++.+ .|.++..+++.+++.-.++..++++.++..+++.+. ++.+++|+||| +++++++++|+
T Consensus 5 ~~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~-~~~~~~v~r~~g~~~~i~~~~l~ 75 (556)
T TIGR01525 5 MALATIAAYAMG--------LVLEGALLLFLFLLGETLEERAKGRASDALSALLAL-APSTARVLQGDGSEEEVPVEELQ 75 (556)
T ss_pred HHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEECCCeEEEEEHHHCC
Confidence 344445555554 466666666666667677777777777777777643 56789999996 99999999999
Q ss_pred cCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhc
Q 047874 157 VGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSIS 236 (941)
Q Consensus 157 ~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~ 236 (941)
|||+|.+++||+|||||++++|+. .||||+|||||.|+.|.+++ .+|+||.+.+|.++++|+++|.+|++|++.+.+.
T Consensus 76 ~GDiv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~ 153 (556)
T TIGR01525 76 VGDIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGD-EVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVE 153 (556)
T ss_pred CCCEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcC-EEeeceEECCceEEEEEEEecccCHHHHHHHHHH
Confidence 999999999999999999999986 99999999999999999864 5999999999999999999999999999999998
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHH
Q 047874 237 HELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVV 316 (941)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~ 316 (941)
+...+++|+++.+++++.++.++++.++++++++++. .+. . ..+..+++++++
T Consensus 154 ~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~---~~~----------------------~--~~~~~~~~vlv~ 206 (556)
T TIGR01525 154 EAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLA---LGA----------------------L--GALYRALAVLVV 206 (556)
T ss_pred HHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcc----------------------c--hHHHHHHHHHhh
Confidence 8888899999999999999999988888888776532 111 1 457789999999
Q ss_pred HcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHH
Q 047874 317 AIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQN 396 (941)
Q Consensus 317 ~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 396 (941)
+|||+|++++++++..+..++.++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+.... ..+
T Consensus 207 ~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~-------~~~- 278 (556)
T TIGR01525 207 ACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASI-------SEE- 278 (556)
T ss_pred ccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCc-------cHH-
Confidence 999999999999999999999999999999999999999999999999999999999999876543210 011
Q ss_pred HHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCC
Q 047874 397 LYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINE 476 (941)
Q Consensus 397 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~ 476 (941)
+.+..+..+. ..+.||.+.|+++++. +.+.+... . + ....+ +.+ .....+ ++
T Consensus 279 --~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~-~~~~~~~~--~-~-~~~~~---~~~-gi~~~~---~g 330 (556)
T TIGR01525 279 --ELLALAAALE--------------QSSSHPLARAIVRYAK-KRGLELPK--Q-E-DVEEV---PGK-GVEATV---DG 330 (556)
T ss_pred --HHHHHHHHHh--------------ccCCChHHHHHHHHHH-hcCCCccc--c-c-CeeEe---cCC-eEEEEE---CC
Confidence 2222221111 1256999999999998 55543221 0 0 11111 111 111111 22
Q ss_pred ceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEE
Q 047874 477 KVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLL 556 (941)
Q Consensus 477 ~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~l 556 (941)
. ..+..|+++.+ + .. +. + ....++..+++.++|++++.++. |.+++
T Consensus 331 ~--~~~~lg~~~~~-~-~~------~~----~---~~~~~~~~~~~~~~g~~~~~v~~-----------------~~~~~ 376 (556)
T TIGR01525 331 Q--EEVRIGNPRLL-E-LA------AE----P---ISASPDLLNEGESQGKTVVFVAV-----------------DGELL 376 (556)
T ss_pred e--eEEEEecHHHH-h-hc------CC----C---chhhHHHHHHHhhCCcEEEEEEE-----------------CCEEE
Confidence 1 12234777655 1 11 00 0 11123445667889999998885 45899
Q ss_pred EEEeccCCCCcchHHHHHHHHhcC-CeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhc
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAG-VNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIE 635 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aG-i~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 635 (941)
|.+.++|+++|+++++|+.|+++| ++++|+|||+..++..+++++|+..
T Consensus 377 g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~------------------------------ 426 (556)
T TIGR01525 377 GVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE------------------------------ 426 (556)
T ss_pred EEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe------------------------------
Confidence 999999999999999999999999 9999999999999999999999964
Q ss_pred CceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHH
Q 047874 636 SIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWG 715 (941)
Q Consensus 636 ~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 715 (941)
+|+++.|++|.++++.+++.++.|+|+|||.||++|+++||+||++| ++.+.+++.||+++.+++++.+.++++.|
T Consensus 427 ---~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~ 502 (556)
T TIGR01525 427 ---VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLS 502 (556)
T ss_pred ---eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 716 RCVYNNIQKFLQFQLTVNVAALVINFGAA 744 (941)
Q Consensus 716 R~~~~~i~~~i~~~l~~n~~~~~~~~~~~ 744 (941)
|++++|+++++.|++.+|++.+++++++.
T Consensus 503 r~~~~~i~~nl~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 503 RKTRRIIKQNLAWALGYNLVAIPLAAGGL 531 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999887766543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-70 Score=641.11 Aligned_cols=505 Identities=25% Similarity=0.379 Sum_probs=419.1
Q ss_pred HHHHHHHHHhhhcccccCCcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcc
Q 047874 77 ILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVV 156 (941)
Q Consensus 77 ~lli~~~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv 156 (941)
+++++++++++.+ .|+++..+++.+++...++.+++++.++..+++.+. ++.+++|+|||+++++++++|+
T Consensus 4 l~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~-~~~~~~v~r~g~~~~i~~~~l~ 74 (536)
T TIGR01512 4 LMALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALMEL-APDTARVLRGGSLEEVAVEELK 74 (536)
T ss_pred HHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEECCEEEEEEHHHCC
Confidence 4455666666664 588887777777677778888888888888888754 5678999999999999999999
Q ss_pred cCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhc
Q 047874 157 VGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSIS 236 (941)
Q Consensus 157 ~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~ 236 (941)
|||+|.+++||+|||||++++|+. .||||+|||||.|+.|.+++ .+|+||.+.+|.++++|++||.+|.+|++.+.+.
T Consensus 75 ~GDiv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~ 152 (536)
T TIGR01512 75 VGDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGD-EVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVE 152 (536)
T ss_pred CCCEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCC-EEEeeeEECCceEEEEEEEeccccHHHHHHHHHH
Confidence 999999999999999999999987 99999999999999999865 5999999999999999999999999999999998
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHH
Q 047874 237 HELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVV 316 (941)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~ 316 (941)
+...+++|+++.+++++.++.++++.++++.++++. +.+. +...+..+++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----------------------~~~~~~~~~svlv~ 206 (536)
T TIGR01512 153 EAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPG---LLKR-----------------------WPFWVYRALVLLVV 206 (536)
T ss_pred HHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hhcc-----------------------cHHHHHHHHHHHhh
Confidence 888889999999999999999988887776665532 2211 11267788999999
Q ss_pred HcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHH
Q 047874 317 AIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQN 396 (941)
Q Consensus 317 ~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 396 (941)
+|||+|++++++++..+..++.++|+++|+++++|++|++|++|||||||||+|+|+|.+++..
T Consensus 207 ~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------- 270 (536)
T TIGR01512 207 ASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------- 270 (536)
T ss_pred cCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH----------------
Confidence 9999999999999999999999999999999999999999999999999999999999987531
Q ss_pred HHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCC
Q 047874 397 LYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINE 476 (941)
Q Consensus 397 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~ 476 (941)
+.+..+.++. ..+.||.+.|++++++ +.+ ++ ......| .+ ++... .++
T Consensus 271 --~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~-~~~-~~-------~~~~~~~---g~---gi~~~-~~g 318 (536)
T TIGR01512 271 --EVLRLAAAAE--------------QASSHPLARAIVDYAR-KRE-NV-------ESVEEVP---GE---GVRAV-VDG 318 (536)
T ss_pred --HHHHHHHHHh--------------ccCCCcHHHHHHHHHH-hcC-CC-------cceEEec---CC---eEEEE-ECC
Confidence 2232222111 1256999999999987 332 11 1111111 11 22111 233
Q ss_pred ceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEE
Q 047874 477 KVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLL 556 (941)
Q Consensus 477 ~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~l 556 (941)
.++ ..|+++.+.+... ..+..+|.+++.++. |..+.
T Consensus 319 ~~~---~ig~~~~~~~~~~------------------------~~~~~~~~~~~~v~~-----------------~~~~~ 354 (536)
T TIGR01512 319 GEV---RIGNPRSLEAAVG------------------------ARPESAGKTIVHVAR-----------------DGTYL 354 (536)
T ss_pred eEE---EEcCHHHHhhcCC------------------------cchhhCCCeEEEEEE-----------------CCEEE
Confidence 333 3477765532110 034456766655543 56899
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCC-eEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhc
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGV-NVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIE 635 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi-~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 635 (941)
|.+.++|+++|+++++|++|+++|+ +++|+|||+..++..+++++|+..
T Consensus 355 g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~------------------------------ 404 (536)
T TIGR01512 355 GYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE------------------------------ 404 (536)
T ss_pred EEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh------------------------------
Confidence 9999999999999999999999999 999999999999999999999964
Q ss_pred CceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHH
Q 047874 636 SIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWG 715 (941)
Q Consensus 636 ~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 715 (941)
+|++..|++|.++++.++++++.|+|+|||.||++|+++||+||++|.++++.+++.||+++.++++..+.++++.|
T Consensus 405 ---~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~ 481 (536)
T TIGR01512 405 ---VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLA 481 (536)
T ss_pred ---hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHH
Confidence 68888999999999999999999999999999999999999999999668899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 716 RCVYNNIQKFLQFQLTVNVAALVINFGA 743 (941)
Q Consensus 716 R~~~~~i~~~i~~~l~~n~~~~~~~~~~ 743 (941)
|++++++++++.|++.+|++.+++.+++
T Consensus 482 r~~~~~i~~nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 482 RRTRRIVKQNVVIALGIILLLILLALFG 509 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999888776643
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-70 Score=637.35 Aligned_cols=500 Identities=28% Similarity=0.406 Sum_probs=408.3
Q ss_pred ccchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcccCCCeEEEEEC-CEEeeeecCCcccCcEEEEcCCCeeecceEE
Q 047874 98 GWFDGGSIIFAVFLV-VSVSAVSNFKQSRQFQALANESSDIRVEVVRD-GRRRGLSIFDVVVGEVVCLKTGDQIPADGLF 175 (941)
Q Consensus 98 ~~~~~~~i~~~l~~~-~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~-g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~l 175 (941)
.||+...+++.+++. -.++...+.+.++..+++.+. .+.+++++|+ |++++|++++|+|||+|+|++||+|||||++
T Consensus 52 ~~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~-~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v 130 (562)
T TIGR01511 52 TFFDASAMLITFILLGRWLEMLAKGRASDALSKLAKL-QPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTV 130 (562)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEE
Confidence 466766555444332 244555555566666666643 4678889885 6779999999999999999999999999999
Q ss_pred EecceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHH
Q 047874 176 LNGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSW 255 (941)
Q Consensus 176 l~g~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~ 255 (941)
++|++ .||||+|||||.|+.|.+++ .+|+||.+.+|.++++|+++|.+|.+||+.+.+.+++.+++|+++..++++.+
T Consensus 131 ~~g~~-~vdes~lTGEs~pv~k~~gd-~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~ 208 (562)
T TIGR01511 131 IEGES-EVDESLVTGESLPVPKKVGD-PVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGY 208 (562)
T ss_pred EECce-EEehHhhcCCCCcEEcCCCC-EEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHH
Confidence 99987 89999999999999999875 59999999999999999999999999999999999888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHH
Q 047874 256 IGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMK 335 (941)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~ 335 (941)
++++++.++++++++|. ..+..++++++++|||+|++++|+++..+..
T Consensus 209 ~~~~v~~~a~~~~~~~~--------------------------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~ 256 (562)
T TIGR01511 209 FVPVVIAIALITFVIWL--------------------------------FALEFAVTVLIIACPCALGLATPTVIAVATG 256 (562)
T ss_pred HHHHHHHHHHHHHHHHH--------------------------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHH
Confidence 99988888777665532 2466789999999999999999999999999
Q ss_pred HHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCcccccc
Q 047874 336 RMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYN 415 (941)
Q Consensus 336 ~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 415 (941)
+++++|+++|+.+++|+|+++|++|||||||||+|+|++.++...+.. + .+ +.+..+.+++.
T Consensus 257 ~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~-~--------~~---~~l~~aa~~e~------ 318 (562)
T TIGR01511 257 LAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR-D--------RT---ELLALAAALEA------ 318 (562)
T ss_pred HHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC-C--------HH---HHHHHHHHHhc------
Confidence 999999999999999999999999999999999999999998754321 0 11 22333322221
Q ss_pred CCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcc
Q 047874 416 SNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCS 495 (941)
Q Consensus 416 ~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~ 495 (941)
.+.||.++|++++++ +.+.+.... ......| ..++.... ++.++ ..|+++.+.+...
T Consensus 319 --------~s~HPia~Ai~~~~~-~~~~~~~~~----~~~~~~~------g~Gi~~~~-~g~~~---~iG~~~~~~~~~~ 375 (562)
T TIGR01511 319 --------GSEHPLAKAIVSYAK-EKGITLVEV----SDFKAIP------GIGVEGTV-EGTKI---QLGNEKLLGENAI 375 (562)
T ss_pred --------cCCChHHHHHHHHHH-hcCCCcCCC----CCeEEEC------CceEEEEE-CCEEE---EEECHHHHHhCCC
Confidence 246999999999987 554432111 1111111 12222222 33333 4588887643211
Q ss_pred cccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHH
Q 047874 496 HYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVES 575 (941)
Q Consensus 496 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~ 575 (941)
.++ ++.++|.+++.++. |.+++|++.++|++||+++++|++
T Consensus 376 ----------~~~------------~~~~~g~~~~~~~~-----------------~~~~~g~~~~~d~l~~~a~e~i~~ 416 (562)
T TIGR01511 376 ----------KID------------GKAEQGSTSVLVAV-----------------NGELAGVFALEDQLRPEAKEVIQA 416 (562)
T ss_pred ----------CCC------------hhhhCCCEEEEEEE-----------------CCEEEEEEEecccccHHHHHHHHH
Confidence 011 12357888776654 568999999999999999999999
Q ss_pred HHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHH
Q 047874 576 CRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSL 655 (941)
Q Consensus 576 l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l 655 (941)
|++.|++++|+|||+..++..+++++|++ ++++..|++|.++++.+
T Consensus 417 Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~----------------------------------~~~~~~p~~K~~~v~~l 462 (562)
T TIGR01511 417 LKRRGIEPVMLTGDNRKTAKAVAKELGIN----------------------------------VRAEVLPDDKAALIKEL 462 (562)
T ss_pred HHHcCCeEEEEcCCCHHHHHHHHHHcCCc----------------------------------EEccCChHHHHHHHHHH
Confidence 99999999999999999999999999994 57888999999999999
Q ss_pred HhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 656 KQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVA 735 (941)
Q Consensus 656 ~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~ 735 (941)
+++++.|+|+|||.||++|+++||+||+|| ++++.+++.||+++.++++..+.++++.||++++++++++.|++.+|++
T Consensus 463 ~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~ 541 (562)
T TIGR01511 463 QEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVI 541 (562)
T ss_pred HHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhc
Q 047874 736 ALVINFGAAVSS 747 (941)
Q Consensus 736 ~~~~~~~~~~~~ 747 (941)
.+++++++.+..
T Consensus 542 ~i~la~~~~~~~ 553 (562)
T TIGR01511 542 AIPIAAGVLYPI 553 (562)
T ss_pred HHHHHHhhhhcc
Confidence 887776554433
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-69 Score=661.49 Aligned_cols=510 Identities=26% Similarity=0.367 Sum_probs=417.1
Q ss_pred ccchhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEE
Q 047874 98 GWFDGGSIIFAV-FLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFL 176 (941)
Q Consensus 98 ~~~~~~~i~~~l-~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll 176 (941)
.||+...+++.+ .+.-.++...+.+..+..+++.+. .+.+++|+|+|++++|+.++|+|||+|+|++||+|||||+|+
T Consensus 284 ~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l-~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~ 362 (834)
T PRK10671 284 LYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDL-TPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEIT 362 (834)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEE
Confidence 366654444332 223344444444555555566543 467899999999999999999999999999999999999999
Q ss_pred ecceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHH
Q 047874 177 NGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWI 256 (941)
Q Consensus 177 ~g~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~ 256 (941)
+|+. .||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|+++|.+|.+|++.+.+.+++..++|+++..++++.++
T Consensus 363 ~g~~-~vdeS~lTGEs~pv~k~~gd-~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~ 440 (834)
T PRK10671 363 QGEA-WLDEAMLTGEPIPQQKGEGD-SVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVF 440 (834)
T ss_pred EceE-EEeehhhcCCCCCEecCCCC-EEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHH
Confidence 9976 99999999999999999875 599999999999999999999999999999999988888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHH
Q 047874 257 GKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKR 336 (941)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~ 336 (941)
+++++.++++++++|++ .+.. ..+...+..++++++++|||+|++++|+++..+..+
T Consensus 441 v~~v~~~a~~~~~~~~~---~~~~--------------------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~ 497 (834)
T PRK10671 441 VPVVVVIALVSAAIWYF---FGPA--------------------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGR 497 (834)
T ss_pred HHHHHHHHHHHHHHHHH---hCCc--------------------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHH
Confidence 99998888877776532 2210 024456778999999999999999999999999999
Q ss_pred HhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccC
Q 047874 337 MMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNS 416 (941)
Q Consensus 337 l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 416 (941)
++|+|+++|+.+++|+++++|++|||||||||+|+|+|.++...+.. + + .+.+..+.++++
T Consensus 498 ~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-~---------~--~~~l~~a~~~e~------- 558 (834)
T PRK10671 498 AAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV-D---------E--AQALRLAAALEQ------- 558 (834)
T ss_pred HHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC-C---------H--HHHHHHHHHHhC-------
Confidence 99999999999999999999999999999999999999988653321 0 0 123333333322
Q ss_pred CCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhccc
Q 047874 417 NSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSH 496 (941)
Q Consensus 417 ~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~ 496 (941)
.+.||.++|+++++. .... .. ..+|+...+ .++... .++. .+.+|+++.+.+..
T Consensus 559 -------~s~hp~a~Ai~~~~~-~~~~--~~---------~~~~~~~~g-~Gv~~~-~~g~---~~~~G~~~~~~~~~-- 612 (834)
T PRK10671 559 -------GSSHPLARAILDKAG-DMTL--PQ---------VNGFRTLRG-LGVSGE-AEGH---ALLLGNQALLNEQQ-- 612 (834)
T ss_pred -------CCCCHHHHHHHHHHh-hCCC--CC---------cccceEecc-eEEEEE-ECCE---EEEEeCHHHHHHcC--
Confidence 256999999999876 3211 10 112222221 222221 2343 23569999774321
Q ss_pred ccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHH
Q 047874 497 YYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESC 576 (941)
Q Consensus 497 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l 576 (941)
++ .+.+.+..+++.++|.+++.+++ |..++|++.++|++||+++++|++|
T Consensus 613 ----------~~---~~~~~~~~~~~~~~g~~~v~va~-----------------~~~~~g~~~l~d~~r~~a~~~i~~L 662 (834)
T PRK10671 613 ----------VD---TKALEAEITAQASQGATPVLLAV-----------------DGKAAALLAIRDPLRSDSVAALQRL 662 (834)
T ss_pred ----------CC---hHHHHHHHHHHHhCCCeEEEEEE-----------------CCEEEEEEEccCcchhhHHHHHHHH
Confidence 11 12345556677889999998886 3468999999999999999999999
Q ss_pred HhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHH
Q 047874 577 RNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLK 656 (941)
Q Consensus 577 ~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~ 656 (941)
++.|++++|+|||+..++..+++++|+.. ++++..|++|.++++.++
T Consensus 663 ~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~---------------------------------~~~~~~p~~K~~~i~~l~ 709 (834)
T PRK10671 663 HKAGYRLVMLTGDNPTTANAIAKEAGIDE---------------------------------VIAGVLPDGKAEAIKRLQ 709 (834)
T ss_pred HHCCCeEEEEcCCCHHHHHHHHHHcCCCE---------------------------------EEeCCCHHHHHHHHHHHh
Confidence 99999999999999999999999999964 789999999999999999
Q ss_pred hCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 657 QKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAA 736 (941)
Q Consensus 657 ~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~ 736 (941)
++++.|+|+|||.||++|+++||+||+|| ++++.++++||+++.++++.++.++++.||+++.++++|+.|++.||++.
T Consensus 710 ~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~ 788 (834)
T PRK10671 710 SQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLG 788 (834)
T ss_pred hcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 89999999999999999999999999999999999999999999999998
Q ss_pred HHHHHH
Q 047874 737 LVINFG 742 (941)
Q Consensus 737 ~~~~~~ 742 (941)
+.++++
T Consensus 789 i~~a~g 794 (834)
T PRK10671 789 IPIAAG 794 (834)
T ss_pred HHHHHh
Confidence 887763
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-57 Score=478.59 Aligned_cols=499 Identities=27% Similarity=0.395 Sum_probs=388.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEC-CEEeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCC
Q 047874 111 LVVSVSAVSNFKQSRQFQALANESSDIRVEVVRD-GRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMT 189 (941)
Q Consensus 111 ~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~-g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LT 189 (941)
+..+.+++.|.+-+.+-..|++......++++++ |.++.+++.+|+.||+|+++.||.||+||.+++|.+ +||||++|
T Consensus 78 FANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAIT 156 (681)
T COG2216 78 FANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAIT 156 (681)
T ss_pred HHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhcc
Confidence 3334456666665555556655444456777775 899999999999999999999999999999999998 99999999
Q ss_pred CCCCceecCCCCC--eEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 047874 190 GESDRVEVDEKNP--FLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLV 267 (941)
Q Consensus 190 GEs~pv~k~~~~~--~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 267 (941)
|||.|+-|+.+++ -+-.||.+.+.+.+.++++...+|.+.|+...+..+..++||.+-.++-+..-+..+.+ +++
T Consensus 157 GESaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL---~~~ 233 (681)
T COG2216 157 GESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFL---LAV 233 (681)
T ss_pred CCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHH---HHH
Confidence 9999999997643 28899999999999999999999999999999999999999988766544332222111 111
Q ss_pred HHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCc
Q 047874 268 LAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKL 347 (941)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~ 347 (941)
...+.+..+.+. . . -.+...++++++.+|..+.-.++-.=..++.|+.+.+++.++.
T Consensus 234 ~Tl~p~a~y~~g------------~---------~--~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SG 290 (681)
T COG2216 234 ATLYPFAIYSGG------------G---------A--ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSG 290 (681)
T ss_pred HhhhhHHHHcCC------------C---------C--cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCc
Confidence 111111111110 0 0 1234567889999999988888877778999999999999999
Q ss_pred hhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCC
Q 047874 348 SACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGS 427 (941)
Q Consensus 348 ~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (941)
.++|..|.+|++..|||||+|-|+-.-.+++..+.... +.+..++.+++- .+ .-
T Consensus 291 RAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~~-------------~~la~aa~lsSl---~D----------eT 344 (681)
T COG2216 291 RAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVSE-------------EELADAAQLASL---AD----------ET 344 (681)
T ss_pred chhhhcCCccEEEecccCceeecchhhhheecCCCCCH-------------HHHHHHHHHhhh---cc----------CC
Confidence 99999999999999999999999887777776554221 112223223321 11 13
Q ss_pred ccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeC
Q 047874 428 PTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRIL 507 (941)
Q Consensus 428 p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l 507 (941)
|.-+++++.++ +.+.+.+.....- .....||+.+.+.+++-.. ++ +-.-|||.+.+....+.. +|
T Consensus 345 pEGrSIV~LA~-~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~~---~~--~~irKGA~dai~~~v~~~---~g----- 409 (681)
T COG2216 345 PEGRSIVELAK-KLGIELREDDLQS-HAEFVPFTAQTRMSGVDLP---GG--REIRKGAVDAIRRYVRER---GG----- 409 (681)
T ss_pred CCcccHHHHHH-HhccCCCcccccc-cceeeecceecccccccCC---CC--ceeecccHHHHHHHHHhc---CC-----
Confidence 56678899888 6665544332211 3456799888777666543 22 345799999998876521 11
Q ss_pred CHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEc
Q 047874 508 DGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVT 587 (941)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~T 587 (941)
..++.++...++-++.|-..++++. |-.++|++.++|-++++.+|-+.+||+.|||.+|+|
T Consensus 410 --~~p~~l~~~~~~vs~~GGTPL~V~~-----------------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~T 470 (681)
T COG2216 410 --HIPEDLDAAVDEVSRLGGTPLVVVE-----------------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMIT 470 (681)
T ss_pred --CCCHHHHHHHHHHHhcCCCceEEEE-----------------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEe
Confidence 1245677778888899988888874 558999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcC
Q 047874 588 GDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGD 667 (941)
Q Consensus 588 Gd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGD 667 (941)
|||+.||..+|++.|++. ..++++|++|.+.++.-|.+|+-|+|+||
T Consensus 471 GDN~~TAa~IA~EAGVDd---------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGD 517 (681)
T COG2216 471 GDNPLTAAAIAAEAGVDD---------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGD 517 (681)
T ss_pred CCCHHHHHHHHHHhCchh---------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCC
Confidence 999999999999999986 68999999999999999999999999999
Q ss_pred CccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 668 GTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQL 730 (941)
Q Consensus 668 g~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l 730 (941)
|.||+|+|.+||||+||. +|+..|||++.++=.|.+...+.+.++.|++..-.=-....|++
T Consensus 518 GTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSI 579 (681)
T COG2216 518 GTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSI 579 (681)
T ss_pred CCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhheeecccceeeeh
Confidence 999999999999999999 99999999999999999999999999999987643333333443
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=295.43 Aligned_cols=224 Identities=32% Similarity=0.574 Sum_probs=189.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEe-cceEEE
Q 047874 105 IIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLN-GHSLKV 183 (941)
Q Consensus 105 i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~-g~~l~V 183 (941)
+++.+++..+++.+++++.++..+++.+...+..++|+|||+++.++++||+|||+|.+++||++||||++++ |+ +.|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~-~~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGS-AYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSE-EEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccc-ccc
Confidence 3455566677888888888888888876555545999999999999999999999999999999999999999 65 599
Q ss_pred eeccCCCCCCceecCC----CCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHH
Q 047874 184 DESSMTGESDRVEVDE----KNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKI 259 (941)
Q Consensus 184 des~LTGEs~pv~k~~----~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 259 (941)
|||.+|||+.|+.|.+ .++++|+||.+.+|++.++|++||.+|..|++.+.....+.+++++++.++++..++.++
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 9999999999999982 357899999999999999999999999999999999887778899999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhh
Q 047874 260 GLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMK 339 (941)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~ 339 (941)
.++++++++++++.. ... .++...+..++++++.++|++||+++++++..+++++.+
T Consensus 161 ~~~~~~~~~~~~~~~---~~~--------------------~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~ 217 (230)
T PF00122_consen 161 ILAIAILVFIIWFFN---DSG--------------------ISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAK 217 (230)
T ss_dssp HHHHHHHHHHHCHTG---STT--------------------CHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccceec---ccc--------------------cccccccccccceeeeecccceeehHHHHHHHHHHHHHH
Confidence 877777666443221 100 045577888999999999999999999999999999999
Q ss_pred hhhhccCchhhhh
Q 047874 340 DHAMVRKLSACET 352 (941)
Q Consensus 340 ~~ilvk~~~~~e~ 352 (941)
+|+++|+.+++|+
T Consensus 218 ~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 218 NGIIVKNLSALEA 230 (230)
T ss_dssp TTEEESSTTHHHH
T ss_pred CCEEEeCcccccC
Confidence 9999999999985
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-27 Score=253.47 Aligned_cols=450 Identities=13% Similarity=0.128 Sum_probs=291.7
Q ss_pred CcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeecccccccc---------------ch----
Q 047874 485 GAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQ---------------VQ---- 545 (941)
Q Consensus 485 Ga~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~---------------~~---- 545 (941)
|-.+.+.+.|+++|+ +..+.|++...+.+..+.+..-...| .|++||||+....-.. ..
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 778888999999997 44677999999999998888877777 6999999864311000 00
Q ss_pred --------------------------------hhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHH
Q 047874 546 --------------------------------EKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHT 593 (941)
Q Consensus 546 --------------------------------~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~ 593 (941)
-...-++.+|.|++..+.+.+.+....|+.|.++.||++.+|-++...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 001236789999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCC---------Cccc---------------------ceecchh---------------cccCCH-
Q 047874 594 ARAIAIECGILNPDVDL---------NKDE---------------------AVIEGVQ---------------FRSLSA- 627 (941)
Q Consensus 594 a~~ia~~~gi~~~~~~~---------~~~~---------------------~~~~g~~---------------~~~~~~- 627 (941)
.+-+|+++||...|+.. +... ...+..+ +..++.
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 99999999999877632 0000 0000000 001100
Q ss_pred ------------------------HHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccC--HHHHHhCCcc
Q 047874 628 ------------------------EERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTND--APALRAADIG 681 (941)
Q Consensus 628 ------------------------~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND--~~~l~~A~vg 681 (941)
+++++...-+.+|..++|+.-.++++.+|++|++|+++|...|- .-.+-+||++
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadIS 1015 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADIS 1015 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcccee
Confidence 11222222344899999999999999999999999999999984 4457889999
Q ss_pred EEecCC------------CcH------------------HHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 682 LSMGIQ------------GTE------------------VAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLT 731 (941)
Q Consensus 682 Iam~~~------------~~~------------------~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~ 731 (941)
||+..- ++. ...-++|+.......-.+..+|+.+|.....+|+++.|.++
T Consensus 1016 ialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq 1095 (1354)
T KOG4383|consen 1016 IALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQ 1095 (1354)
T ss_pred EEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 998511 010 11123344444444557888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHH-hcccCCCCCccCCC--------CCCCCCCCccHHHHHHH
Q 047874 732 VNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALA-LATEQPTNDLMSKP--------PVGRSKPLITKIMWRNL 802 (941)
Q Consensus 732 ~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~-l~~~~~~~~~~~~~--------p~~~~~~~~~~~~~~~~ 802 (941)
..+....+++++.++..|..++..+++|.+++..++..+. +...+|.+.+|.+. |.+.+..++...+|...
T Consensus 1096 ~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~maagKNlqeIPKk~kh~fllcFilkFs 1175 (1354)
T KOG4383|consen 1096 AQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIMAAGKNLQEIPKKEKHKFLLCFILKFS 1175 (1354)
T ss_pred HHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEeeccCChhhcccHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999876555555 32344444454432 22222222233333333
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCc----------------------------cccchhHHHHHHHHHHHHHHhhhccCC
Q 047874 803 ISQAIYQVAILLTLQFKGRSILGVK----------------------------ESVKDTMIFNTFVLCQIFNEFNARKLE 854 (941)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~t~~f~~lv~~~~~~~~~~r~~~ 854 (941)
...+...+.+.+.++-......+.+ .++..+.+- ++.-.++..+.... .
T Consensus 1176 ls~ssclIcFgf~L~afcd~~~d~n~~nC~~~m~~S~ddqa~a~FedfangL~saQkl~aa~--iilH~ifiqIThih-~ 1252 (1354)
T KOG4383|consen 1176 LSASSCLICFGFLLMAFCDLMCDFNDINCLFNMDGSADDQALAEFEDFANGLGSAQKLLAAE--IILHIIFIQITHIH-C 1252 (1354)
T ss_pred hhHHHHHHHHHHHHHHhhhhhccccccceeeccCCCcCcccchhHHHHHhhhhhHHHHHHHH--HHHHhheeEEEEEE-E
Confidence 2222222222233332221111110 111111111 11111111111111 1
Q ss_pred cccc-cccCcccHHHHHHHHHHHHHHHHHH----HHh-----hhcccccCCChHHHHHHHHHHHHHHHHHHHHHhccccC
Q 047874 855 KKNI-FKGIHKNKLFLAIIGITIALQLVMV----EFL-----KTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPVSG 924 (941)
Q Consensus 855 ~~~~-~~~~~~n~~~~~~~~~~~~~~~~~~----~~~-----~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 924 (941)
..+. |+...+|.||-+.+-+.+.-+++.+ +.. +--|+....|+..|++..++..++++.+|++|....|.
T Consensus 1253 tkpl~~ks~LsnLWwa~~i~~lLl~a~V~taldlQi~thrd~~VHfgldd~pLL~~~igcisi~iiVitNEiiKiheIR~ 1332 (1354)
T KOG4383|consen 1253 TKPLSFKSGLSNLWWAFPIKCLLLDAAVITALDLQIGTHRDRGVHFGLDDFPLLPLGIGCISICIIVITNEIIKIHEIRQ 1332 (1354)
T ss_pred ecchhhhcccchheeecccceeehhhHHHHHHhhhhhhccccceeeccccchhHHHHHHHHheeeeeehhhHHHHHHHHH
Confidence 2344 4577788776554433322222222 222 12266677788889988888888889999999988877
Q ss_pred cccccchHHhhhhhc
Q 047874 925 KQLLPINQEASRIHK 939 (941)
Q Consensus 925 ~~~~~~~~~~~~~~~ 939 (941)
....|++|+.+...|
T Consensus 1333 ~~R~QkRqK~eFdTK 1347 (1354)
T KOG4383|consen 1333 FTREQKRQKFEFDTK 1347 (1354)
T ss_pred HHHHHHhhhheeccc
Confidence 778899998887654
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=204.85 Aligned_cols=171 Identities=39% Similarity=0.637 Sum_probs=143.6
Q ss_pred CCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcc
Q 047874 749 KVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKGRSILGVKE 828 (941)
Q Consensus 749 ~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (941)
|.|+++.|+||+|+++|.+|+++++.|+|++++|++||++++++++++.++..++.++++++++++..++.....++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 68999999999999999999999999999999999999999999999999999999999999988888877666566554
Q ss_pred c-------cchhHHHHHHHHHHHHHHhhhccCCcccccc--cCcccHHHHHHHHHHHHHHHHHHHH--hhhcccccCCCh
Q 047874 829 S-------VKDTMIFNTFVLCQIFNEFNARKLEKKNIFK--GIHKNKLFLAIIGITIALQLVMVEF--LKTFADTERLNW 897 (941)
Q Consensus 829 ~-------~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~--~~~~n~~~~~~~~~~~~~~~~~~~~--~~~~f~~~~l~~ 897 (941)
. .++|++|.+++++|+++.+++|+.+ .+.|+ +.++|+++++++++++++++++++. ++.+|++.++++
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~-~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~ 159 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRR-RSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPL 159 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSS-STCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----TH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhccccccc-ccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCH
Confidence 4 4899999999999999999999854 45554 8889999999999999988887654 899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Q 047874 898 GQWAACIGIAAMSWPIGFLIKCI 920 (941)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~k~~ 920 (941)
.+|+++++.+++.++++|++|++
T Consensus 160 ~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 160 WQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999985
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.3e-22 Score=208.21 Aligned_cols=97 Identities=48% Similarity=0.764 Sum_probs=91.5
Q ss_pred CcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHH
Q 047874 552 GLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERI 631 (941)
Q Consensus 552 ~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 631 (941)
+..++|.+.+.|++|++++++|+.|+++|++++|+|||+..++.++++++||...
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~------------------------- 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS------------------------- 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE-------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc-------------------------
Confidence 6789999999999999999999999999999999999999999999999999542
Q ss_pred HhhcCceEEEec--CHHHH--HHHHHHHHhCCCEEEEEcCCccCHHHHHhCC
Q 047874 632 AKIESIRVMARS--SPLDK--LLMVQSLKQKGHVVAVTGDGTNDAPALRAAD 679 (941)
Q Consensus 632 ~~~~~~~v~~~~--~p~~K--~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~ 679 (941)
.+++++ +|++| .++++.++.+++.|+|+|||.||++|+++||
T Consensus 170 ------~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 ------IVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ------EEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ------cccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 389999 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.4e-14 Score=126.15 Aligned_cols=125 Identities=24% Similarity=0.336 Sum_probs=108.7
Q ss_pred EEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHh
Q 047874 554 TLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAK 633 (941)
Q Consensus 554 ~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 633 (941)
...+.++---++=++++++|++|++. +++++.|||...+....|+-.|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 45677777788889999999999999 99999999999999999999998764
Q ss_pred hcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecC--CCcHHHHhccCEEeccCCchHHHHH
Q 047874 634 IESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGI--QGTEVAKESSDIVIMDDNFSSVVTV 711 (941)
Q Consensus 634 ~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~--~~~~~a~~~ad~vl~~~~~~~i~~~ 711 (941)
++++...|+.|.++++.|++.++.|.|+|||.||.+||+.||+||..-+ +..+.+.++||+++. +...++++
T Consensus 72 ----rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl 145 (152)
T COG4087 72 ----RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDL 145 (152)
T ss_pred ----eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHH
Confidence 3899999999999999999999999999999999999999999998542 345567799999987 55555544
Q ss_pred H
Q 047874 712 L 712 (941)
Q Consensus 712 i 712 (941)
.
T Consensus 146 ~ 146 (152)
T COG4087 146 L 146 (152)
T ss_pred h
Confidence 3
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.3e-13 Score=119.04 Aligned_cols=87 Identities=34% Similarity=0.569 Sum_probs=70.0
Q ss_pred ccCccccccCCCCCCccccCCccHHHHHHHHHHhcC--CCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEec
Q 047874 407 LNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLG--MNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWK 484 (941)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~--~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~K 484 (941)
+||.+.+....+.......|+|+|.||+.++. +.| .+....+..++++.++||+|+||||+++++ +++.+.+++|
T Consensus 2 LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~-~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~--~~~~~~~~~K 78 (91)
T PF13246_consen 2 LCNDAEIEYDDESKTEEIIGDPTEKALLRFAK-KLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR--NDGKYILYVK 78 (91)
T ss_pred CccccEeecCCCCccccccCCcCHHHHHHHHH-HcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe--CCCEEEEEcC
Confidence 67776665433333334899999999999999 774 455667788999999999999999999998 3335778999
Q ss_pred CcHHHHHhhccc
Q 047874 485 GAAEMILVMCSH 496 (941)
Q Consensus 485 Ga~e~i~~~c~~ 496 (941)
||||.|+++|++
T Consensus 79 GA~e~il~~Ct~ 90 (91)
T PF13246_consen 79 GAPEVILDRCTH 90 (91)
T ss_pred CChHHHHHhcCC
Confidence 999999999985
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.7e-12 Score=107.49 Aligned_cols=68 Identities=28% Similarity=0.481 Sum_probs=64.0
Q ss_pred hhCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHH
Q 047874 16 NLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLS 85 (941)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls 85 (941)
+..++|++++.|++|..+|||++| |++|+++||+|++++++.+++|+.++++|++|+++++++++++|
T Consensus 2 ~~~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 2 HQLSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TTSSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 357899999999999999999977 99999999999999988999999999999999999999999886
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=7.7e-12 Score=134.99 Aligned_cols=68 Identities=25% Similarity=0.305 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 646 LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 646 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.+|+..++.+.+. .+.|+++|||.||.+||+.|++|+||+ |+.+.+|+.||+++.+++.+++.++|++
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 3677777777664 357999999999999999999999999 9999999999999999999999998864
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.9e-11 Score=131.99 Aligned_cols=150 Identities=15% Similarity=0.119 Sum_probs=104.2
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC------------------------------Cc
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL------------------------------NK 612 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~------------------------------~~ 612 (941)
..+.+.++++|++++++|++++++|||+...+..+.+++|+..+-... ..
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~ 97 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWD 97 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhh
Confidence 358899999999999999999999999999999999999986421100 00
Q ss_pred c--cc-eecch---------h----------------cccC------------CHHH---HHHhh----c-CceE-----
Q 047874 613 D--EA-VIEGV---------Q----------------FRSL------------SAEE---RIAKI----E-SIRV----- 639 (941)
Q Consensus 613 ~--~~-~~~g~---------~----------------~~~~------------~~~~---~~~~~----~-~~~v----- 639 (941)
. .. +..+. . +..+ ..++ +...+ . ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ 177 (272)
T PRK15126 98 TRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSAT 177 (272)
T ss_pred cCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 0 00 00000 0 0000 0011 11111 1 1111
Q ss_pred -EEecCH--HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCE--EeccCCchHHHH
Q 047874 640 -MARSSP--LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDI--VIMDDNFSSVVT 710 (941)
Q Consensus 640 -~~~~~p--~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~--vl~~~~~~~i~~ 710 (941)
+...+| .+|+..++.+.+. .+.|+++|||.||.+||+.|+.||||+ |+.+.+|+.||+ ++.+++.+++.+
T Consensus 178 ~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~ 256 (272)
T PRK15126 178 DCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSH 256 (272)
T ss_pred cEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHH
Confidence 112223 2688888888765 358999999999999999999999999 999999999996 778999999998
Q ss_pred HHH
Q 047874 711 VLR 713 (941)
Q Consensus 711 ~i~ 713 (941)
+|+
T Consensus 257 ~l~ 259 (272)
T PRK15126 257 YLT 259 (272)
T ss_pred HHH
Confidence 885
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=2e-11 Score=131.24 Aligned_cols=156 Identities=25% Similarity=0.298 Sum_probs=109.5
Q ss_pred EEeccCC-CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC--------------------------
Q 047874 558 LVGLKDP-CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL-------------------------- 610 (941)
Q Consensus 558 ~i~~~d~-~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~-------------------------- 610 (941)
.+.-.+. +.+.++++|+++++.|++++++|||+...+..+.+++++..+-...
T Consensus 13 TLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~ 92 (264)
T COG0561 13 TLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELL 92 (264)
T ss_pred CccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHH
Confidence 3333343 8899999999999999999999999999999999999998521100
Q ss_pred ------Ccccceecch---------------------------hcc----------cCCH---HHHHHhh----c-CceE
Q 047874 611 ------NKDEAVIEGV---------------------------QFR----------SLSA---EERIAKI----E-SIRV 639 (941)
Q Consensus 611 ------~~~~~~~~g~---------------------------~~~----------~~~~---~~~~~~~----~-~~~v 639 (941)
.......... ... .... ++....+ . ....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 172 (264)
T COG0561 93 ELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLT 172 (264)
T ss_pred HHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceE
Confidence 0000000000 000 0001 1111111 1 1122
Q ss_pred EEecC-------H--HHHHHHHHHHHhC-C---CEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCch
Q 047874 640 MARSS-------P--LDKLLMVQSLKQK-G---HVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFS 706 (941)
Q Consensus 640 ~~~~~-------p--~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~ 706 (941)
+.+.. | .+|+..++.+.+. | +.|+++||+.||.+||+.|+.||||+ |+.+.+|+.||+++.+++.+
T Consensus 173 ~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 173 VSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccch
Confidence 22222 2 4799988888774 3 35999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHH
Q 047874 707 SVVTVLRW 714 (941)
Q Consensus 707 ~i~~~i~~ 714 (941)
+|.++|++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99999875
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.1e-11 Score=128.97 Aligned_cols=67 Identities=28% Similarity=0.246 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccC--EEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSD--IVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad--~vl~~~~~~~i~~~i~~ 714 (941)
+|...++.+.+. .+.|+++|||.||.+||+.|+.||||+ |+.+.+|+.|| +++.+++.+++.++|++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~~ 262 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLRK 262 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHHH
Confidence 577777777654 357999999999999999999999999 99999999988 78889999999998863
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.8e-11 Score=126.32 Aligned_cols=148 Identities=22% Similarity=0.256 Sum_probs=104.8
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceec---c-----hhc--------------
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIE---G-----VQF-------------- 622 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~---g-----~~~-------------- 622 (941)
+.+.+.++|++++++|++++++|||+...+..+++.+|+..+-... +...+.. + ..+
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~-nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAE-NGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEe-cCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 7889999999999999999999999999999999999986421100 0000000 0 000
Q ss_pred ----------------------ccCCHHHHHHhhcC----ceE-----EEecCHH--HHHHHHHHHHhC----CCEEEEE
Q 047874 623 ----------------------RSLSAEERIAKIES----IRV-----MARSSPL--DKLLMVQSLKQK----GHVVAVT 665 (941)
Q Consensus 623 ----------------------~~~~~~~~~~~~~~----~~v-----~~~~~p~--~K~~iv~~l~~~----g~~v~~i 665 (941)
.....++..+.+.+ ..+ +....|. +|...++.+.+. .+.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 00001111111111 111 1222332 488888887664 3579999
Q ss_pred cCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 666 GDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 666 GDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
||+.||.+|++.|++|+||+ |+.+.+|+.||+++.+++.+++.++|++
T Consensus 180 GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred CCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHHH
Confidence 99999999999999999999 9999999999999999999999998863
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.2e-11 Score=123.72 Aligned_cols=147 Identities=25% Similarity=0.296 Sum_probs=103.3
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecc-h----------hcc---------
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEG-V----------QFR--------- 623 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g-~----------~~~--------- 623 (941)
++.+.+.++|++|+++|++++++|||+...+..+++.+++..+-... +...+... . .+.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~-NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAE-NGGVIFYNKEDIFLANMEEEWFLDEEKKKRFP 96 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEc-cCcEEEeCCCcEEEecccchhhHHHhhhhhhh
Confidence 48899999999999999999999999999999999999987431110 00000000 0 000
Q ss_pred ------------------cCCHHHHHHhhcC--ceE-----EEec--CHHHHHHHHHHHHhC----CCEEEEEcCCccCH
Q 047874 624 ------------------SLSAEERIAKIES--IRV-----MARS--SPLDKLLMVQSLKQK----GHVVAVTGDGTNDA 672 (941)
Q Consensus 624 ------------------~~~~~~~~~~~~~--~~v-----~~~~--~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~ 672 (941)
....+.+...+.. ..+ +... ...+|...++.+.+. .+.++++||+.||.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~ 176 (215)
T TIGR01487 97 RDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDI 176 (215)
T ss_pred hhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 0000111111111 111 1122 235788888888764 34699999999999
Q ss_pred HHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHH
Q 047874 673 PALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 673 ~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
+|++.|++|+||+ |+.+.+|+.||+++.+++.+++.++|
T Consensus 177 ~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 177 DLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhhC
Confidence 9999999999999 99999999999999999999988653
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.5e-11 Score=136.53 Aligned_cols=67 Identities=24% Similarity=0.359 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
+|+..++.+.+. .+.|+++|||.||.+||+.|+.||||| ||.+.+|+.||+|+.+++.++|.++|++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 566666666654 247999999999999999999999999 9999999999999999999999998863
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.15 E-value=2e-10 Score=120.36 Aligned_cols=148 Identities=21% Similarity=0.272 Sum_probs=102.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecch--------hcc------------
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGV--------QFR------------ 623 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~--------~~~------------ 623 (941)
.+.+.+.++|++++++|++++++|||+...+..+++++|+..+.... +...+.... .+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~-nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAE-NGGEISYNEGMDDIFLAYLEEEWFLDIVIAKT 93 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEe-cCcEEEeCCCCceEEecccCHHHHHHHHHhcc
Confidence 47788999999999999999999999999999999999965321100 000000000 000
Q ss_pred ---------------------cCCHHHHHHhhcC----ceE-----EEecCH--HHHHHHHHHHHhC----CCEEEEEcC
Q 047874 624 ---------------------SLSAEERIAKIES----IRV-----MARSSP--LDKLLMVQSLKQK----GHVVAVTGD 667 (941)
Q Consensus 624 ---------------------~~~~~~~~~~~~~----~~v-----~~~~~p--~~K~~iv~~l~~~----g~~v~~iGD 667 (941)
....+........ ..+ +....| .+|...++.+.++ .+.|+++||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD 173 (225)
T TIGR01482 94 FPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGD 173 (225)
T ss_pred cchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECC
Confidence 0001111111111 001 112222 4788888887664 357999999
Q ss_pred CccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchH----HHHHHH
Q 047874 668 GTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSS----VVTVLR 713 (941)
Q Consensus 668 g~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~----i~~~i~ 713 (941)
+.||.+|++.|++|+||+ |+.+.+|+.||+++.+++.++ +.++|+
T Consensus 174 ~~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 174 SENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred CHhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 999999999999999999 999999999999999999999 766664
|
catalyze the same reaction as SPP. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.7e-10 Score=120.45 Aligned_cols=150 Identities=18% Similarity=0.192 Sum_probs=104.3
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCC------------------------------
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLN------------------------------ 611 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~------------------------------ 611 (941)
...+.+.+.++|++++++|++++++|||+...+..+.+++++..+-....
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 34577999999999999999999999999999999999999873211000
Q ss_pred --cccc-eecchhcc-c--------------------------------------CCH-------HHHHHhhcCceEEE-
Q 047874 612 --KDEA-VIEGVQFR-S--------------------------------------LSA-------EERIAKIESIRVMA- 641 (941)
Q Consensus 612 --~~~~-~~~g~~~~-~--------------------------------------~~~-------~~~~~~~~~~~v~~- 641 (941)
.... +.++.... . ... +++.+.......+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 0000 00000000 0 000 11122222211111
Q ss_pred ------ec--CHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHH
Q 047874 642 ------RS--SPLDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVV 709 (941)
Q Consensus 642 ------~~--~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~ 709 (941)
.. ...+|...++.+.+. .+.++++||+.||.+||+.||.|+||+ |+.+..++.||+++.+++.++++
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~ 251 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVA 251 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHH
Confidence 12 235799888888763 468999999999999999999999999 99999999999999988889998
Q ss_pred HHH
Q 047874 710 TVL 712 (941)
Q Consensus 710 ~~i 712 (941)
++|
T Consensus 252 ~~i 254 (254)
T PF08282_consen 252 KAI 254 (254)
T ss_dssp HHH
T ss_pred HhC
Confidence 875
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.13 E-value=9.9e-11 Score=95.50 Aligned_cols=62 Identities=26% Similarity=0.427 Sum_probs=57.0
Q ss_pred HhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhc
Q 047874 26 ILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFG 89 (941)
Q Consensus 26 ~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~ 89 (941)
.|++|.++|||+++ +++|+++||+|++++++.+++|+.++++|++|++++++++++++++.+
T Consensus 2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 47888888999877 999999999999999888899999999999999999999999998653
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.2e-10 Score=122.56 Aligned_cols=67 Identities=27% Similarity=0.352 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
+|...++.+.++ .+.|+++||+.||.+|++.|++|+||| |+.+..|+.||+++.+++.+++.++|++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~~ 269 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIYS 269 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHHH
Confidence 577777766544 357999999999999999999999999 8999999999999999999999998863
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.2e-10 Score=121.05 Aligned_cols=131 Identities=20% Similarity=0.276 Sum_probs=100.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDV-DLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
++.|++.+.++.|+++|+++.++||.....+..+.+++|+..... .+......++|.... .-
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g-----------------~i 243 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLG-----------------DI 243 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecC-----------------cc
Confidence 478999999999999999999999999888899999999864100 000000111111100 01
Q ss_pred cCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 643 SSPLDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
+....|.+.++.+.++ .+.|+++|||.||.+|++.||+|||| |+.+..++.||+++..++++++..++-
T Consensus 244 v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 244 VDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred CCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 2346788888888654 36899999999999999999999999 789999999999999999999987664
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.06 E-value=8.9e-10 Score=112.21 Aligned_cols=129 Identities=16% Similarity=0.098 Sum_probs=100.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCccc-ceecchhcccCCHHHHHHhhcCceEEE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDV-DLNKDE-AVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
++.|++.+.|+.+++.| +++++||-....+..+++++|+..--. .+.... ..++|.. +
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~-----------------~-- 127 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQ-----------------L-- 127 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECee-----------------e--
Confidence 57899999999999985 999999999999999999999974210 000000 1111210 1
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHH
Q 047874 642 RSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWG 715 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 715 (941)
..++.|...++.+++.+..+.++|||.||.+|++.||+||++. +.+..++.||-.-.-.+.+.+..++.++
T Consensus 128 -~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 128 -RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred -cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 3567899999999988889999999999999999999999995 7777777777666666788888888765
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.9e-09 Score=114.64 Aligned_cols=68 Identities=19% Similarity=0.074 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHh-------CCCEEEEEcCCccCHHHHHhCCccEEecCCCc-HH-----HHhccCEEeccCCchHHHHHH
Q 047874 646 LDKLLMVQSLKQ-------KGHVVAVTGDGTNDAPALRAADIGLSMGIQGT-EV-----AKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 646 ~~K~~iv~~l~~-------~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~-~~-----a~~~ad~vl~~~~~~~i~~~i 712 (941)
.+|...++.+.+ ..+.|+++|||.||.+||+.|++||||| ++. +. .+..+|+++...+-+++.+++
T Consensus 186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 367777777765 3468999999999999999999999999 444 32 345799999999999999888
Q ss_pred HH
Q 047874 713 RW 714 (941)
Q Consensus 713 ~~ 714 (941)
++
T Consensus 265 ~~ 266 (271)
T PRK03669 265 DH 266 (271)
T ss_pred HH
Confidence 64
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.4e-09 Score=113.22 Aligned_cols=67 Identities=22% Similarity=0.167 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhC------CCEEEEEcCCccCHHHHHhCCccEEecCCCc---HHHHhc--c-CEEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK------GHVVAVTGDGTNDAPALRAADIGLSMGIQGT---EVAKES--S-DIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~------g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~---~~a~~~--a-d~vl~~~~~~~i~~~i~~ 714 (941)
+|...++.+.+. .+.|+++||+.||.+|++.||.||||+ |+. +..|+. | ++++.+++.+|+.+++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 677776666543 467999999999999999999999999 887 467876 4 599999999999998864
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.7e-09 Score=106.02 Aligned_cols=104 Identities=16% Similarity=0.183 Sum_probs=85.8
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec--CHHHH
Q 047874 571 AAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS--SPLDK 648 (941)
Q Consensus 571 ~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K 648 (941)
.+|+.|+++|+++.++|+.+...+....+.+|+.. .|... .|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---------------------------------~f~~~kpkp~~~ 87 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---------------------------------FHEGIKKKTEPY 87 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------EEecCCCCHHHH
Confidence 78999999999999999999999999999999974 22222 34444
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHH
Q 047874 649 LLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSV 708 (941)
Q Consensus 649 ~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i 708 (941)
..+++.++-..+.|+++||+.||.+|++.|++++||+ |+.+.+++.|++++.+++-++.
T Consensus 88 ~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 88 AQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCH
Confidence 4555555444568999999999999999999999999 9999999999999976665554
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.2e-09 Score=113.56 Aligned_cols=66 Identities=35% Similarity=0.374 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHH
Q 047874 646 LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 646 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
.+|...++.+.+. .+.++++||+.||.+|++.|+.|+||+ ++.+.+++.||+++.+++.+++.++|
T Consensus 187 ~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 187 VSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred CChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhhC
Confidence 3688888888765 358999999999999999999999999 89999999999999999999998653
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.93 E-value=6.1e-09 Score=101.56 Aligned_cols=105 Identities=17% Similarity=0.248 Sum_probs=84.2
Q ss_pred HHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHH
Q 047874 572 AVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLM 651 (941)
Q Consensus 572 ~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 651 (941)
+|++|+++|+++.++||++...+..+++++|+.. .+... ..|.+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------------~~~~~--~~k~~~ 80 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------------LYQGQ--SNKLIA 80 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE---------------------------------EEecc--cchHHH
Confidence 8999999999999999999999999999999864 12211 234444
Q ss_pred HHHHHh----CCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchH-HHHHH
Q 047874 652 VQSLKQ----KGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSS-VVTVL 712 (941)
Q Consensus 652 v~~l~~----~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~-i~~~i 712 (941)
++.+.+ ..+.++++||+.||.+|++.|+++++|. ++.+..+..||+++.++.-++ +.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 81 FSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 444432 3568999999999999999999999998 888999999999998776444 55444
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=9.6e-09 Score=105.13 Aligned_cols=120 Identities=23% Similarity=0.293 Sum_probs=90.7
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC-CCcccceecchhcccCCHHHHHHhhcCceEEE
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVD-LNKDEAVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
.+++|++.+.++.++++|.+++++||-...-+..+|+++|++..-.. +...+-+++|.. +--
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v-----------------~g~ 138 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRV-----------------VGP 138 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEecee-----------------eee
Confidence 57899999999999999999999999999999999999999863210 000001333332 223
Q ss_pred ecCHHHHHHHHHHHHhC-CC---EEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEec
Q 047874 642 RSSPLDKLLMVQSLKQK-GH---VVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIM 701 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~-g~---~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~ 701 (941)
.+..+.|...++.+.+. |. .+.++|||.||.|||+.||.+|+++ +.+..+..|+....
T Consensus 139 ~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 139 ICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred ecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 44557899888776653 43 6999999999999999999999995 66666666665544
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.8e-08 Score=92.93 Aligned_cols=116 Identities=19% Similarity=0.294 Sum_probs=95.2
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHH
Q 047874 571 AAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLL 650 (941)
Q Consensus 571 ~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 650 (941)
-.|+.|+++||++.++|||+...+..-|+++||.. +|- --.+|..
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~---------------------------------~~q--G~~dK~~ 86 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH---------------------------------LYQ--GISDKLA 86 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------eee--chHhHHH
Confidence 57899999999999999999999999999999974 232 2367877
Q ss_pred HHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCC----chHHHHHHHHHHHHHHHH
Q 047874 651 MVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDN----FSSVVTVLRWGRCVYNNI 722 (941)
Q Consensus 651 iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~----~~~i~~~i~~gR~~~~~i 722 (941)
..+.+.++ -+.|+++||..||.|+|++.++++|+. ++.+..++.||+|+.... ...+.++|..++..++-.
T Consensus 87 a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~ 165 (170)
T COG1778 87 AFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEA 165 (170)
T ss_pred HHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHH
Confidence 77666654 568999999999999999999999998 899999999999997654 445666666666555443
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.4e-08 Score=104.12 Aligned_cols=128 Identities=20% Similarity=0.326 Sum_probs=93.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC-CCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVD-LNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
++.+++.+.++.|+++|+++.++||.....+..+.+.+|+..-... .......++|. +...
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~------------------~~~~ 146 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGL------------------VEGP 146 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEE------------------ecCc
Confidence 5789999999999999999999999999999999999998641100 00000011110 0001
Q ss_pred -cCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHH
Q 047874 643 -SSPLDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTV 711 (941)
Q Consensus 643 -~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~ 711 (941)
..+..|..+++.+.++ .+.++++||+.||.+|.+.||++++++ +.+..+++||+++.++++..+..+
T Consensus 147 ~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 147 IVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 1123366666655443 246899999999999999999999985 678888999999999998887754
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.2e-08 Score=105.06 Aligned_cols=67 Identities=24% Similarity=0.173 Sum_probs=56.6
Q ss_pred HHHHHHHHHHhC----C-CEEEEEcCCccCHHHHHhCCccEEecCCCcHHHH----hcc-CEEe--ccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----G-HVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAK----ESS-DIVI--MDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g-~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~----~~a-d~vl--~~~~~~~i~~~i~~ 714 (941)
+|...++.+.+. . +.|+++||+.||.+|++.|++|+||+ ||.+.+| +.| +.+. .+++-+++.++|++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAINK 268 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHHH
Confidence 677777777643 5 89999999999999999999999999 9999988 666 6777 67778999988863
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.9e-08 Score=98.17 Aligned_cols=98 Identities=17% Similarity=0.257 Sum_probs=79.8
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHH
Q 047874 571 AAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLL 650 (941)
Q Consensus 571 ~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 650 (941)
.+|+.|+++|+++.++||++...+..+++++|+.. +|. ..+.|..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~---------------------------------~f~--g~~~k~~ 99 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH---------------------------------LYQ--GQSNKLI 99 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------eec--CCCcHHH
Confidence 68999999999999999999999999999999864 222 1234555
Q ss_pred HHHHHHh-C---CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCC
Q 047874 651 MVQSLKQ-K---GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDN 704 (941)
Q Consensus 651 iv~~l~~-~---g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~ 704 (941)
.++.+.+ . .+.|+++||+.||.+|++.|+++++++ ++.+..+..||+++..+.
T Consensus 100 ~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~ 156 (183)
T PRK09484 100 AFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAG 156 (183)
T ss_pred HHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCC
Confidence 5544433 2 458999999999999999999999998 788888999999997544
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.5e-07 Score=99.31 Aligned_cols=67 Identities=18% Similarity=0.232 Sum_probs=59.2
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccC----EEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSD----IVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad----~vl~~~~~~~i~~~i~~ 714 (941)
.|...++.+.++ ...|+++||+.||.+|++.|+.||+|+ |+.+..|+.|| +++.+++-+++.++|++
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 788888888664 236899999999999999999999999 99999999999 88888889999998864
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=5.4e-07 Score=92.87 Aligned_cols=127 Identities=18% Similarity=0.207 Sum_probs=90.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEE--
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMA-- 641 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~-- 641 (941)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+...-. .....++.. .+..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~----~~~~~~~~~----------------~i~~~~ 126 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFC----HSLEVDEDG----------------MITGYD 126 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhc----ceEEECCCC----------------eEECcc
Confidence 3579999999999999 9999999999999999999999863100 000010000 0000
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCE-EeccCCchHHHHHHHH
Q 047874 642 RSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDI-VIMDDNFSSVVTVLRW 714 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~-vl~~~~~~~i~~~i~~ 714 (941)
...|..|...++.++..+..++|+|||.||.+|.++|++|+..+ ...+.....+++ ++. ++..+...+.+
T Consensus 127 ~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l~~ 197 (205)
T PRK13582 127 LRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAIDK 197 (205)
T ss_pred ccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHHHH
Confidence 12467888888988888899999999999999999999999987 443334445565 433 56666655543
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.52 E-value=6.1e-07 Score=95.41 Aligned_cols=152 Identities=16% Similarity=0.196 Sum_probs=102.2
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC-CCcccceecch-hc-----------------
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVD-LNKDEAVIEGV-QF----------------- 622 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~-~~~~~~~~~g~-~~----------------- 622 (941)
..+..|...+++++++++|+.++++|||+...++.+.+++++..+... ..+...+..+. ..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 345678999999999999999999999999999999999998765210 01111111100 00
Q ss_pred --------cc-----------------CCH-------HHHHHhhc----CceE-EE-----ecCH--HHHHHHHHHHHhC
Q 047874 623 --------RS-----------------LSA-------EERIAKIE----SIRV-MA-----RSSP--LDKLLMVQSLKQK 658 (941)
Q Consensus 623 --------~~-----------------~~~-------~~~~~~~~----~~~v-~~-----~~~p--~~K~~iv~~l~~~ 658 (941)
.. ... +++...+. .+.+ .+ ...| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 00 000 00111111 1111 11 2233 4788888888764
Q ss_pred ----CCEEEEEcCCccCHHHHHh-CCccEEecCCCcHHHHhccC-------EEeccCCchHHHHHHHH
Q 047874 659 ----GHVVAVTGDGTNDAPALRA-ADIGLSMGIQGTEVAKESSD-------IVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 659 ----g~~v~~iGDg~ND~~~l~~-A~vgIam~~~~~~~a~~~ad-------~vl~~~~~~~i~~~i~~ 714 (941)
.+.|+++||+.||.+|++. ++.||+|+ |+.+..++.++ ++.....-+|+.+++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 4689999999999999998 67999999 99998887554 77777778899888764
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.6e-05 Score=87.63 Aligned_cols=98 Identities=18% Similarity=0.233 Sum_probs=73.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++++++.+.+++++++|++++++|+.+...+..+++.+|+.+ .++.++. ..++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---------~Vigsd~------------------~~~~ 124 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---------GVFASDG------------------TTNL 124 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---------EEEeCCC------------------cccc
Confidence 467999999999999999999999999999999999999832 1221111 1134
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTE 690 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~ 690 (941)
.|+.|.+.++..... +.+.++||+.||.+|++.|+-.++++ .+..
T Consensus 125 kg~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~ 169 (479)
T PRK08238 125 KGAAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVG-ASPG 169 (479)
T ss_pred CCchHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEEC-CCHH
Confidence 566676655432222 22678999999999999999999997 4433
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.5e-07 Score=89.89 Aligned_cols=111 Identities=21% Similarity=0.287 Sum_probs=80.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
.+.|++++.++.|++.|.++.++||.-..-+..+|.++||+..+.+.+.-..--+|+-.. .. . --.-+
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g-fd---------~--~~pts 155 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG-FD---------T--NEPTS 155 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc-cc---------c--CCccc
Confidence 367999999999999999999999999999999999999987543211000000111000 00 0 00112
Q ss_pred CHHHHHHHHHHHHhC--CCEEEEEcCCccCHHHHHhCCccEEecC
Q 047874 644 SPLDKLLMVQSLKQK--GHVVAVTGDGTNDAPALRAADIGLSMGI 686 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~--g~~v~~iGDg~ND~~~l~~A~vgIam~~ 686 (941)
....|.++++.+++. -+.++|||||+||.+|+..||.=|+.++
T Consensus 156 dsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~g 200 (227)
T KOG1615|consen 156 DSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFGG 200 (227)
T ss_pred cCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccCC
Confidence 335799999999885 4589999999999999999888887764
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.2e-06 Score=89.91 Aligned_cols=117 Identities=20% Similarity=0.165 Sum_probs=80.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++++++.+.++.|+++|+++.++|+.....+..+++.+|+.... ...+...+-.... ...+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~------~~~~~~~~~g~~~----------p~~~~~~ 143 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVY------SNELVFDEKGFIQ----------PDGIVRV 143 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEE------EEEEEEcCCCeEe----------cceeeEE
Confidence 57899999999999999999999999999999999999975310 0001000000000 0011223
Q ss_pred CHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccC
Q 047874 644 SPLDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSD 697 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad 697 (941)
.|..|.++++.+.+. .+.++++||+.||.+|++.||++++++ ......+.++|
T Consensus 144 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 144 TFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred ccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 455677776666543 346999999999999999999999997 44444444444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.7e-06 Score=96.38 Aligned_cols=149 Identities=17% Similarity=0.203 Sum_probs=95.2
Q ss_pred CCcchHHHH-HHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC-Ccccceecchh---------------------
Q 047874 565 CRPGVRAAV-ESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL-NKDEAVIEGVQ--------------------- 621 (941)
Q Consensus 565 ~~~~~~~~I-~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~-~~~~~~~~g~~--------------------- 621 (941)
+.+...+++ +++++.|+.++++|||.+.....+.++.++..+.... .+...+..+..
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333344555 8899999999999999999999999999988764200 00000000000
Q ss_pred -----ccc-----------------CCH-------HHHHHhhc----CceE------EEecCH--HHHHHHHHHHHhC--
Q 047874 622 -----FRS-----------------LSA-------EERIAKIE----SIRV------MARSSP--LDKLLMVQSLKQK-- 658 (941)
Q Consensus 622 -----~~~-----------------~~~-------~~~~~~~~----~~~v------~~~~~p--~~K~~iv~~l~~~-- 658 (941)
+.. ... +++.+.+. .+.+ +....| .+|...++.+.+.
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 000 000 11111121 1111 223333 3698888888765
Q ss_pred -----CCEEEEEcCCccCHHHHHhCC-ccEEecCCCcHHHHhcc--------CEEec-cCCchHHHHHHHH
Q 047874 659 -----GHVVAVTGDGTNDAPALRAAD-IGLSMGIQGTEVAKESS--------DIVIM-DDNFSSVVTVLRW 714 (941)
Q Consensus 659 -----g~~v~~iGDg~ND~~~l~~A~-vgIam~~~~~~~a~~~a--------d~vl~-~~~~~~i~~~i~~ 714 (941)
.+.|+++||+.||.+||+.|+ .||+|+ |+.+..|+.+ +++.. ++.-+|+.++|++
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 348999999999999999999 699999 9999888743 44433 5567888877753
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.30 E-value=5.1e-06 Score=86.66 Aligned_cols=39 Identities=13% Similarity=0.164 Sum_probs=36.3
Q ss_pred CcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCC
Q 047874 566 RPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGIL 604 (941)
Q Consensus 566 ~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~ 604 (941)
.+.++++|++|+++|++++++|||+...+..+.+.+|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.24 E-value=7e-06 Score=85.06 Aligned_cols=136 Identities=15% Similarity=0.093 Sum_probs=87.2
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEE--
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVM-- 640 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~-- 640 (941)
.+++|++.+.++.|++.|+++.++||.....+..+.+.++.... . .......+|..+.... +....+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~-i--~~n~~~~~~~~~~~~~--------p~~~~~~~ 137 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR-I--YCNEADFSNEYIHIDW--------PHPCDGTC 137 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc-E--EeceeEeeCCeeEEeC--------CCCCcccc
Confidence 36899999999999999999999999999999999888754321 0 0001122222211000 000000
Q ss_pred -EecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHh--ccCEEeccCCchHHHHHHH
Q 047874 641 -ARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKE--SSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 641 -~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~--~ad~vl~~~~~~~i~~~i~ 713 (941)
..+ ...|..+++.++...+.++|+|||.||.+|++.||+++|-+ .-.+..++ .+.+.. ++|..+...++
T Consensus 138 ~~~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 138 QNQC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred ccCC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 011 34689999998888888999999999999999999987754 21121121 122222 46777776654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.23 E-value=5.6e-06 Score=86.20 Aligned_cols=44 Identities=16% Similarity=0.143 Sum_probs=39.7
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILN 605 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~ 605 (941)
.+..-++++++|++|+++|++++++|||+...+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45566789999999999999999999999999999999999854
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.3e-05 Score=83.91 Aligned_cols=129 Identities=23% Similarity=0.301 Sum_probs=83.3
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC---C-cccceecchhcccCCHHHHHHhhcCceE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL---N-KDEAVIEGVQFRSLSAEERIAKIESIRV 639 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~---~-~~~~~~~g~~~~~~~~~~~~~~~~~~~v 639 (941)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+...+... . .....+.|..... .
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~--------------~ 149 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENE--------------P 149 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCC--------------c
Confidence 36799999999999999999999999999999999999996311100 0 0000011110000 0
Q ss_pred EEecCHHHHHHHHHHHHhC--CCEEEEEcCCccCHHHHHh--CCccEEecCCC-cHHHHhccCEEeccCCchHHHH
Q 047874 640 MARSSPLDKLLMVQSLKQK--GHVVAVTGDGTNDAPALRA--ADIGLSMGIQG-TEVAKESSDIVIMDDNFSSVVT 710 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~~~--g~~v~~iGDg~ND~~~l~~--A~vgIam~~~~-~~~a~~~ad~vl~~~~~~~i~~ 710 (941)
.+....|.+.++.+.++ .+.++++||+.||..|.++ ++++++.+... .+.....+|+++. ++..+.+
T Consensus 150 --~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 150 --TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred --ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 01123477777766654 3579999999999999888 45555555221 2334556899886 5555554
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.12 E-value=4.8e-06 Score=84.69 Aligned_cols=92 Identities=25% Similarity=0.314 Sum_probs=68.9
Q ss_pred cchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHH
Q 047874 567 PGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPL 646 (941)
Q Consensus 567 ~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 646 (941)
+++.+.|+.++++|++++++||.....+..+++.+|+...+ ++......+- ......+.++.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--------v~~~~~~~~~----------~~~~~~~~~~~ 153 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--------VIGNELFDNG----------GGIFTGRITGS 153 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--------EEEEEEECTT----------CCEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--------EEEEeeeecc----------cceeeeeECCC
Confidence 77889999999999999999999999999999999997521 1111110000 11233444433
Q ss_pred ---HHHHHHHHH------HhCCCEEEEEcCCccCHHHHH
Q 047874 647 ---DKLLMVQSL------KQKGHVVAVTGDGTNDAPALR 676 (941)
Q Consensus 647 ---~K~~iv~~l------~~~g~~v~~iGDg~ND~~~l~ 676 (941)
.|.+.++.+ +.....++++|||.||.+|||
T Consensus 154 ~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 154 NCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp EESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 499999999 445789999999999999996
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.7e-05 Score=81.41 Aligned_cols=107 Identities=16% Similarity=0.146 Sum_probs=77.3
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCc-ccceecchhcccCCHHHHHHhhcCceE
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDV-DLNK-DEAVIEGVQFRSLSAEERIAKIESIRV 639 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~-~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~v 639 (941)
..++++++.+.++.++++|++++++||.....+..+++.+|+..--. .... .....+|...
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~----------------- 147 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNID----------------- 147 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCcc-----------------
Confidence 34578999999999999999999999999999999999999864200 0000 0111222110
Q ss_pred EEecCHHHHHHHHHHHHh-CC---CEEEEEcCCccCHHHHHhCCccEEec
Q 047874 640 MARSSPLDKLLMVQSLKQ-KG---HVVAVTGDGTNDAPALRAADIGLSMG 685 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~~-~g---~~v~~iGDg~ND~~~l~~A~vgIam~ 685 (941)
--.+..+.|...++.+.+ .+ +.+.++||+.+|.+|++.||.++++.
T Consensus 148 ~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 148 GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 012345778877776654 33 37899999999999999999999986
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.04 E-value=2e-05 Score=81.98 Aligned_cols=110 Identities=15% Similarity=0.124 Sum_probs=74.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceE-E-E
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRV-M-A 641 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v-~-~ 641 (941)
+++|++.+.++.|++.|+++.++||-....+..+.+.+ +..... .......+|..+...... .... + .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i--~~n~~~~~~~~~~~~kp~-------p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQI--YCNGSDFSGEYITITWPH-------PCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcE--EEeEEEecCCeeEEeccC-------Cccccccc
Confidence 57899999999999999999999999999999999988 643110 000111222211100000 0000 0 0
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEe
Q 047874 642 RSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSM 684 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam 684 (941)
++ ...|..+++.++...+.|+++|||.||.+|.+.||+.++-
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 01 1248888888887778899999999999999999997763
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.04 E-value=1e-05 Score=81.09 Aligned_cols=98 Identities=22% Similarity=0.287 Sum_probs=70.2
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCc-ccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDV-DLNK-DEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~-~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
+++++.+.++.+++.|++++++||.....+..+++.+|+..--. .... ....++|.... -..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~----------------~~~ 137 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEG----------------QVN 137 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCC----------------ccc
Confidence 57999999999999999999999999999999999999863100 0000 00011121100 012
Q ss_pred cCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhC
Q 047874 643 SSPLDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAA 678 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A 678 (941)
..+..|...++.+++. .+.++++|||.||.+|++.|
T Consensus 138 ~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 138 PEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred CCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 4467899988887654 45799999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=2.8e-05 Score=83.12 Aligned_cols=142 Identities=11% Similarity=0.150 Sum_probs=88.4
Q ss_pred CCCcchHHHHHHHHh-cCCeEEEEcCCCHHHHHHHHHHcCCC--CCCC-CC--Ccc------------------------
Q 047874 564 PCRPGVRAAVESCRN-AGVNVKMVTGDNVHTARAIAIECGIL--NPDV-DL--NKD------------------------ 613 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~-aGi~v~i~TGd~~~~a~~ia~~~gi~--~~~~-~~--~~~------------------------ 613 (941)
.+.++++++|++|++ .|++++++|||+...+..+.+.+++. ..+- .. ...
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 456899999999998 79999999999999999888777642 1110 00 000
Q ss_pred ------------cceecchhcccCCHHH---HHHh----hcCce-----EEEecCH--HHHHHHHHHHHhC----CCEEE
Q 047874 614 ------------EAVIEGVQFRSLSAEE---RIAK----IESIR-----VMARSSP--LDKLLMVQSLKQK----GHVVA 663 (941)
Q Consensus 614 ------------~~~~~g~~~~~~~~~~---~~~~----~~~~~-----v~~~~~p--~~K~~iv~~l~~~----g~~v~ 663 (941)
..+....... ...+. +.+. ..... -+....| .+|...++.+.+. ...++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~-~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~ 194 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAP-QHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPV 194 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCC-ccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEE
Confidence 0000000000 00111 1111 11111 1222233 4888888877654 46799
Q ss_pred EEcCCccCHHHHHhC----CccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 664 VTGDGTNDAPALRAA----DIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 664 ~iGDg~ND~~~l~~A----~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
++||+.||.+||+.+ +.||+|| ++. ..|++.+. +...+.+.+.
T Consensus 195 ~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 195 FVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSWLE 241 (266)
T ss_pred EEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHHHH
Confidence 999999999999999 9999999 664 34778776 5666665553
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=2.8e-05 Score=82.44 Aligned_cols=54 Identities=22% Similarity=0.307 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHhCCCEEEEEcC----CccCHHHHHhC-CccEEecCCCcHHHHhccCEEe
Q 047874 646 LDKLLMVQSLKQKGHVVAVTGD----GTNDAPALRAA-DIGLSMGIQGTEVAKESSDIVI 700 (941)
Q Consensus 646 ~~K~~iv~~l~~~g~~v~~iGD----g~ND~~~l~~A-~vgIam~~~~~~~a~~~ad~vl 700 (941)
.+|+..++.+.++.+.|+++|| |.||.+||+.| -.|++++ |+.+..|..+.++.
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 4799999999888889999999 99999999977 5778888 89998888776543
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.97 E-value=4.5e-05 Score=79.35 Aligned_cols=127 Identities=22% Similarity=0.376 Sum_probs=92.9
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEE
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
...+-++++++++.|+++|++..++|+++...+..+.+..|+...- ..++.+... -..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F------~~i~g~~~~----------------~~~ 144 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF------DVIVGGDDV----------------PPP 144 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc------ceEEcCCCC----------------CCC
Confidence 4457799999999999999999999999999999999999997631 111111111 011
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCC---ccEEecCC-CcHHHHhccCEEeccCCchHHHHHH
Q 047874 642 RSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAAD---IGLSMGIQ-GTEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~---vgIam~~~-~~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
+-.|.......+.+....+.++||||..+|..|=++|+ +|+..|.+ ........+|+++. ++..+...+
T Consensus 145 KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l 217 (220)
T COG0546 145 KPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALL 217 (220)
T ss_pred CcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHH
Confidence 22456666666666655458999999999999999998 66777743 34556667999987 666666544
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=5.1e-05 Score=79.41 Aligned_cols=129 Identities=24% Similarity=0.341 Sum_probs=89.9
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
.++.|++.+.++.|+++|+++.++||........+.+.+|+...- ..++.+.... ...
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f------~~~~~~~~~~----------------~~k 149 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF------SVVIGGDSLP----------------NKK 149 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc------cEEEcCCCCC----------------CCC
Confidence 357899999999999999999999999999999999999986421 1122221110 011
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEec--CC-CcHHHHhccCEEeccCCchHHHHHHHHH
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMG--IQ-GTEVAKESSDIVIMDDNFSSVVTVLRWG 715 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~--~~-~~~~a~~~ad~vl~~~~~~~i~~~i~~g 715 (941)
-.|+--..+++.++...+.++++||+.||+.+.+.||+ +|.+. .+ ..+.....+|+++. ++..+...+.++
T Consensus 150 p~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~l~~~ 224 (226)
T PRK13222 150 PDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPLLGLA 224 (226)
T ss_pred cChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHHHHHh
Confidence 12333344555555556789999999999999999999 55554 11 22344557888884 788888776543
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.96 E-value=3.4e-05 Score=80.94 Aligned_cols=43 Identities=5% Similarity=-0.006 Sum_probs=39.4
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILN 605 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~ 605 (941)
+...+.++++|++|+++||.|+++||+.......+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 4466779999999999999999999999999999999999975
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.94 E-value=2.7e-05 Score=78.87 Aligned_cols=114 Identities=12% Similarity=0.126 Sum_probs=76.5
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
-++.+++.+.++.|++.|+++.++|+.+......+.+..|+... ...++++....+- .........++..+..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~------f~~i~~~~~~~~~-~g~~~~~~~~~~~~~~ 143 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDV------FIEIYSNPASFDN-DGRHIVWPHHCHGCCS 143 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhh------eeEEeccCceECC-CCcEEEecCCCCccCc
Confidence 36889999999999999999999999999999999999998642 1112221111000 0000000000001111
Q ss_pred -cCHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHHHhCCccEE
Q 047874 643 -SSPLDKLLMVQSLKQK-GHVVAVTGDGTNDAPALRAADIGLS 683 (941)
Q Consensus 643 -~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~vgIa 683 (941)
.....|.++++.++++ .+.++++|||.||..|.++||+-.|
T Consensus 144 ~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 1123589999999887 8899999999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.88 E-value=3.7e-05 Score=72.93 Aligned_cols=118 Identities=19% Similarity=0.201 Sum_probs=76.7
Q ss_pred eccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceE
Q 047874 560 GLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRV 639 (941)
Q Consensus 560 ~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 639 (941)
.-..++.+++.+.+++|+++|++++++||+....+....+.+|+.... ..++.......-..............
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~~~~~~~~~~~~~ 93 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF------DPVITSNGAAIYYPKEGLFLGGGPFD 93 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh------hheeccchhhhhcccccccccccccc
Confidence 345588999999999999999999999999999999999999984321 11111110000000000000011113
Q ss_pred EEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCC-ccEE
Q 047874 640 MARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAAD-IGLS 683 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~-vgIa 683 (941)
+.+-.++.+..+.+.+....+.++++||+.+|.+|.+.++ -+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 94 IGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred cCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 3345566666777776666678999999999999999843 3443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=8.9e-05 Score=86.50 Aligned_cols=40 Identities=10% Similarity=0.089 Sum_probs=37.0
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGIL 604 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~ 604 (941)
.-+.+.++|++++++|+.++++|||....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4567899999999999999999999999999999999975
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.85 E-value=7.8e-05 Score=76.72 Aligned_cols=125 Identities=21% Similarity=0.252 Sum_probs=84.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.++++.|+++|+++.++|+.....+....+.+|+...- ..++...+. ...+-
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f------~~i~~~~~~----------------~~~KP 132 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF------DHVIGSDEV----------------PRPKP 132 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe------eeEEecCcC----------------CCCCC
Confidence 57899999999999999999999999999999999999986410 111111110 01122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccE-Ee--cC-CCcHHHHhccCEEeccCCchHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGL-SM--GI-QGTEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI-am--~~-~~~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
.|+--..+++.++-..+.+++|||+.+|..+-++||+.. ++ |. +..+..+..+|+++. ++..+..++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~~ 203 (205)
T TIGR01454 133 APDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLALC 203 (205)
T ss_pred ChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHHh
Confidence 333334444555444678999999999999999999853 23 21 222345677999875 566665544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00013 Score=77.08 Aligned_cols=68 Identities=19% Similarity=0.231 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHH-----HHhcc---C-EEeccCCchHHHHHH
Q 047874 646 LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEV-----AKESS---D-IVIMDDNFSSVVTVL 712 (941)
Q Consensus 646 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~-----a~~~a---d-~vl~~~~~~~i~~~i 712 (941)
.+|...++.++++ .+.|+++||+.||.+||..++-||.++ |+.+. ..... . |....+.-.||.+.+
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 5799999999876 347888999999999999999999999 88777 22222 2 344455566777766
Q ss_pred HH
Q 047874 713 RW 714 (941)
Q Consensus 713 ~~ 714 (941)
++
T Consensus 243 ~~ 244 (247)
T PF05116_consen 243 QH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00028 Score=72.50 Aligned_cols=39 Identities=28% Similarity=0.391 Sum_probs=36.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcC
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECG 602 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~g 602 (941)
++.+.+.++|++|++.|++++++|||....+..+.++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999999998854
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00049 Score=71.34 Aligned_cols=124 Identities=19% Similarity=0.197 Sum_probs=83.8
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.+++.++++.|+++|+++.++|+.....+..+.+..|+... ...++.+.... ..+-.
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~------f~~i~~~~~~~----------------~~Kp~ 140 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEF------FDVVITLDDVE----------------HAKPD 140 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhc------eeEEEecCcCC----------------CCCCC
Confidence 679999999999999999999999999999999999998642 11122111110 01223
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEe--cCCCcH-HHHhccCEEeccCCchHHHHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSM--GIQGTE-VAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam--~~~~~~-~a~~~ad~vl~~~~~~~i~~~i 712 (941)
|+--.++.+.+.-....+++|||+.+|..+-++||+- |++ |....+ .....+|+++. ++..+..++
T Consensus 141 p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 141 PEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred cHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 4444455555544456899999999999999999984 233 311122 23446888876 677766554
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00068 Score=71.54 Aligned_cols=132 Identities=16% Similarity=0.262 Sum_probs=84.0
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC------CcccceecchhcccCCHHHHHHhhcC
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL------NKDEAVIEGVQFRSLSAEERIAKIES 636 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~ 636 (941)
-+++||+.+.++.|+++|+++.++||-....+..+.+++|+..++... -...-++.|.. ..
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~-~P------------ 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK-GP------------ 186 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC-CC------------
Confidence 357999999999999999999999999999999999999986543211 00112222211 00
Q ss_pred ceEEEecCHHHHHHHHHH-----HH--hCCCEEEEEcCCccCHHHHHhC---CccEEecC-CCc-----HHHHhccCEEe
Q 047874 637 IRVMARSSPLDKLLMVQS-----LK--QKGHVVAVTGDGTNDAPALRAA---DIGLSMGI-QGT-----EVAKESSDIVI 700 (941)
Q Consensus 637 ~~v~~~~~p~~K~~iv~~-----l~--~~g~~v~~iGDg~ND~~~l~~A---~vgIam~~-~~~-----~~a~~~ad~vl 700 (941)
.+ ....|.+.+.. +. .....|+++|||.||++|..-. .--+.+|- |.. +.-+++-|+|+
T Consensus 187 -~i----~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl 261 (277)
T TIGR01544 187 -LI----HTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVL 261 (277)
T ss_pred -cc----cccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEE
Confidence 01 11345544432 22 2246799999999999995433 11233331 222 23567889999
Q ss_pred ccCCchHHHHHH
Q 047874 701 MDDNFSSVVTVL 712 (941)
Q Consensus 701 ~~~~~~~i~~~i 712 (941)
.+|.--.++..|
T Consensus 262 ~~D~t~~v~~~i 273 (277)
T TIGR01544 262 VQDETLEVANSI 273 (277)
T ss_pred ECCCCchHHHHH
Confidence 988766666554
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00037 Score=72.13 Aligned_cols=122 Identities=21% Similarity=0.264 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.++++.|+++|+++.++|+.+...+..+.+..|+...- ..++.+.... ..+-
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f------~~~~~~~~~~----------------~~Kp 142 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF------SVLIGGDSLA----------------QRKP 142 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC------cEEEecCCCC----------------CCCC
Confidence 47899999999999999999999999999999999999986421 1111111110 0111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEE-e--cCCC-cHHHHhccCEEeccCCchHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS-M--GIQG-TEVAKESSDIVIMDDNFSSVV 709 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa-m--~~~~-~~~a~~~ad~vl~~~~~~~i~ 709 (941)
.|+-=....+.+.-..+.++++||+.+|..+.++||+-.. + |... .+.....+|+++. ++..+.
T Consensus 143 ~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~ 210 (213)
T TIGR01449 143 HPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELP 210 (213)
T ss_pred ChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHH
Confidence 2232233444444445679999999999999999998643 4 2111 1233356888875 555544
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00053 Score=73.72 Aligned_cols=126 Identities=19% Similarity=0.270 Sum_probs=82.6
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
.++.+++.++++.|+++|+++.++|+.+...+..+.++.|+... ...+..+.... ..+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~------f~~i~~~d~~~----------------~~K 157 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRY------FRWIIGGDTLP----------------QKK 157 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhh------CeEEEecCCCC----------------CCC
Confidence 35789999999999999999999999999999989988888531 01121111100 001
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEec--CC-CcHHHHhccCEEeccCCchHHHHHH
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMG--IQ-GTEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~--~~-~~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
-.|+--..+.+.+.-..+.+++|||+.||..+.+.||+ .+++. .+ ..+.....+|+++. ++..+.+++
T Consensus 158 p~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 158 PDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred CCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 12222233334443345689999999999999999998 34443 11 22234457898885 666666543
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00074 Score=83.09 Aligned_cols=61 Identities=26% Similarity=0.349 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHhC--CCEEEEEcCCccCHHHHHhC---CccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 646 LDKLLMVQSLKQK--GHVVAVTGDGTNDAPALRAA---DIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 646 ~~K~~iv~~l~~~--g~~v~~iGDg~ND~~~l~~A---~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
.+|+..++.+.+. .+.|+++||+.||.+||+.+ +.+|+|| ++ +.+|++.+.+. +.+...++
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCCH--HHHHHHHH
Confidence 5899999888874 35899999999999999996 6899998 53 56789999854 55665554
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00075 Score=70.37 Aligned_cols=122 Identities=16% Similarity=0.221 Sum_probs=78.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.++++.|+++|+++.++|+........+.+++|+..-- ..++.+.... ..+-
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f------~~~~~~~~~~----------------~~Kp 149 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF------DALASAEKLP----------------YSKP 149 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc------cEEEEcccCC----------------CCCC
Confidence 57799999999999999999999999999999999999986521 1122221110 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCc---HHHHhccCEEeccCCchHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGT---EVAKESSDIVIMDDNFSSVV 709 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~---~~a~~~ad~vl~~~~~~~i~ 709 (941)
.|+-=..+.+.+.-..+.++++||+.||+.+-+.||+....-..+. +.-...+|+++. ++..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 150 HPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 2332222333333234679999999999999999998643321221 122335677664 444443
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0019 Score=66.71 Aligned_cols=106 Identities=13% Similarity=0.105 Sum_probs=74.9
Q ss_pred CCCcchHHHH-HHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAV-ESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I-~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
.+.|++.+.| +.+++.|++++++|+....-+..+++.+|+.... .++ |.+++.. ......-..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-------~~i-~t~l~~~--------~tg~~~g~~ 158 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-------NLI-ASQMQRR--------YGGWVLTLR 158 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-------ceE-EEEEEEE--------EccEECCcc
Confidence 3479999999 5788899999999999999999999999962210 111 2222110 000001123
Q ss_pred cCHHHHHHHHHHH-HhCCCEEEEEcCCccCHHHHHhCCccEEec
Q 047874 643 SSPLDKLLMVQSL-KQKGHVVAVTGDGTNDAPALRAADIGLSMG 685 (941)
Q Consensus 643 ~~p~~K~~iv~~l-~~~g~~v~~iGDg~ND~~~l~~A~vgIam~ 685 (941)
|..++|..-++.. ........+-||+.||.|||+.|+-.++++
T Consensus 159 c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 159 CLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred CCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 5668898877755 333455678999999999999999999996
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00097 Score=68.56 Aligned_cols=106 Identities=12% Similarity=0.132 Sum_probs=74.8
Q ss_pred CCCcchHHHHH-HHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVE-SCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~-~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
.+.|++.+.|+ .++++|++++++|+-....+..+|+..++.... .++ |.+++.... ....-..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-------~~i-~t~le~~~g--------g~~~g~~ 157 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-------NLI-ASQIERGNG--------GWVLPLR 157 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-------cEE-EEEeEEeCC--------ceEcCcc
Confidence 46899999996 788899999999999999999999997664311 111 222211000 0001223
Q ss_pred cCHHHHHHHHHHHH-hCCCEEEEEcCCccCHHHHHhCCccEEec
Q 047874 643 SSPLDKLLMVQSLK-QKGHVVAVTGDGTNDAPALRAADIGLSMG 685 (941)
Q Consensus 643 ~~p~~K~~iv~~l~-~~g~~v~~iGDg~ND~~~l~~A~vgIam~ 685 (941)
|..++|..-++..- ...+...+-||+.||.|||+.||-.++++
T Consensus 158 c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 158 CLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred CCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 56688988776553 23345678999999999999999999996
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00092 Score=65.79 Aligned_cols=147 Identities=22% Similarity=0.315 Sum_probs=93.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC---Cccc-ceecchh---------cccCCHHHH
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL---NKDE-AVIEGVQ---------FRSLSAEER 630 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~---~~~~-~~~~g~~---------~~~~~~~~~ 630 (941)
++-|++.++++.|++. ...+++|-.-.+-+.++|.-+|++..+.+. +-++ .+.++.- ...++.+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 3569999999999876 445555656667789999999997644321 1010 0111100 111122222
Q ss_pred HHhhcCceEEEecCHHH---------------HHHHHHHHHhC---CCEEEEEcCCccCHHHHHhCC-cc-EEecCCCcH
Q 047874 631 IAKIESIRVMARSSPLD---------------KLLMVQSLKQK---GHVVAVTGDGTNDAPALRAAD-IG-LSMGIQGTE 690 (941)
Q Consensus 631 ~~~~~~~~v~~~~~p~~---------------K~~iv~~l~~~---g~~v~~iGDg~ND~~~l~~A~-vg-Iam~~~~~~ 690 (941)
...+.. +|.|..|.+ |.++++.+.+. ....+++||++.|+.||+.+. -| +|+.-||.+
T Consensus 162 fe~lDe--~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 162 FEKLDE--LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHH--HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 222221 566666654 44555555443 335789999999999999873 33 666668999
Q ss_pred HHHhccCEEeccCCchHHHHHHH
Q 047874 691 VAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 691 ~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
-+...||+.+.+.+..+...+|+
T Consensus 240 Yal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccccceEEeccchhhhhHHHH
Confidence 99999999999888888777664
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0022 Score=68.78 Aligned_cols=122 Identities=16% Similarity=0.175 Sum_probs=81.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+... ...++.+.... .
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~------F~~vi~~~~~~-------------------~ 196 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSL------FSVVQAGTPIL-------------------S 196 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhh------eEEEEecCCCC-------------------C
Confidence 4679999999999999999999999999999999999998642 11222221100 0
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccE-Eec--CCCcH-HHHhccCEEeccCCchHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGL-SMG--IQGTE-VAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI-am~--~~~~~-~a~~~ad~vl~~~~~~~i~~~i 712 (941)
.|+--..+++.+.-..+.+++|||+.+|+.+-++|++-. ++. .+..+ .....+|+++. ++..+..++
T Consensus 197 k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 197 KRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 122112222333323567999999999999999999853 332 11111 23446899885 677776654
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0016 Score=69.16 Aligned_cols=119 Identities=18% Similarity=0.140 Sum_probs=82.2
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.++++.|+++|+++.++|+.....+....+.+|+... ...++.+.+.. ..+-
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~------Fd~iv~~~~~~----------------~~KP 165 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF------FQAVIIGSECE----------------HAKP 165 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh------CcEEEecCcCC----------------CCCC
Confidence 4678999999999999999999999999999999999998742 12233333211 1122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecC-CCcH-HHHhccCEEeccCC
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGI-QGTE-VAKESSDIVIMDDN 704 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~-~~~~-~a~~~ad~vl~~~~ 704 (941)
.|+--..+.+.+.-..+.+++|||+.+|..+-++|++- |++.. ...+ .....+|+++.+..
T Consensus 166 ~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~ 229 (248)
T PLN02770 166 HPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYE 229 (248)
T ss_pred ChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccch
Confidence 34444455555555567899999999999999999984 33421 1112 22346888887443
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0019 Score=68.82 Aligned_cols=122 Identities=11% Similarity=0.135 Sum_probs=82.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|+++|+++.++|+.+...+..+.+.+|+... ...++.+.+.. ..+-
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~------Fd~ii~~~d~~----------------~~KP 166 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF------FSVVLAAEDVY----------------RGKP 166 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh------CcEEEecccCC----------------CCCC
Confidence 4679999999999999999999999999999999999998642 12333333211 1122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCcHHHHhccCEEeccCCchHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGTEVAKESSDIVIMDDNFSSVV 709 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~~a~~~ad~vl~~~~~~~i~ 709 (941)
.|+-=...++.+.-....+++|||+.+|+.+-++||+- |++...........+|+++. ++..+.
T Consensus 167 ~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el~ 231 (260)
T PLN03243 167 DPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDLS 231 (260)
T ss_pred CHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHHH
Confidence 33333444555554566799999999999999999984 34432232333345788765 444443
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0019 Score=67.59 Aligned_cols=124 Identities=19% Similarity=0.146 Sum_probs=83.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+... ...++.+.... ..+-
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~------f~~i~~~~~~~----------------~~KP 152 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQR------CAVLIGGDTLA----------------ERKP 152 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhc------ccEEEecCcCC----------------CCCC
Confidence 4679999999999999999999999999888888888888642 11222221110 1122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecC-C--C-cHHHHhccCEEeccCCchHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGI-Q--G-TEVAKESSDIVIMDDNFSSVVTV 711 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~-~--~-~~~a~~~ad~vl~~~~~~~i~~~ 711 (941)
.|+-=..+++.+.-..+.+++|||+.||..+-+.||+. |++.. . . .......+|+++. ++..+.+.
T Consensus 153 ~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~ 223 (229)
T PRK13226 153 HPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNP 223 (229)
T ss_pred CHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHH
Confidence 34444455566655567899999999999999999986 33321 1 1 1123456888885 55555543
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.002 Score=62.88 Aligned_cols=103 Identities=19% Similarity=0.274 Sum_probs=68.4
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHH---HHHHHc---C--CCCCCCCCCcccceec-chhcccCCHHHHHH
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTAR---AIAIEC---G--ILNPDVDLNKDEAVIE-GVQFRSLSAEERIA 632 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~---~ia~~~---g--i~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~ 632 (941)
+|...+++++++++++++|++++++|||+...+. ...+++ | ++.. ..+.. |..+.....
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g-------~li~~~g~~~~~~~~----- 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHG-------PVLLSPDRLFAALHR----- 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCc-------eEEEcCCcchhhhhc-----
Confidence 4678999999999999999999999999998874 555552 2 3321 11211 111110000
Q ss_pred hhcCceEEEecCHHHHHHHHHHHHh-----CCCEEEEEcCCccCHHHHHhCCcc
Q 047874 633 KIESIRVMARSSPLDKLLMVQSLKQ-----KGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 633 ~~~~~~v~~~~~p~~K~~iv~~l~~-----~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
.+..+..-+.|.+.++.+.+ ....++.+||+.+|+.+-+++++-
T Consensus 93 -----e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -----EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -----ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 12222222348888888876 356778899999999999987664
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0025 Score=67.98 Aligned_cols=100 Identities=18% Similarity=0.172 Sum_probs=69.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.+.++.|+++|+++.++|+.....+..+.+++|+.... ...++.+.+.. ..+-
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f-----~d~ii~~~~~~----------------~~KP 157 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR-----PDYNVTTDDVP----------------AGRP 157 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC-----CceEEccccCC----------------CCCC
Confidence 35789999999999999999999999999999999999886421 01222222210 1112
Q ss_pred CHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHHHhCCcc-EEe
Q 047874 644 SPLDKLLMVQSLKQK-GHVVAVTGDGTNDAPALRAADIG-LSM 684 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~vg-Iam 684 (941)
.|+-=....+.+.-. .+.+++|||+.+|..+-+.||+- |++
T Consensus 158 ~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v 200 (253)
T TIGR01422 158 APWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGL 200 (253)
T ss_pred CHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEE
Confidence 333333444444432 45699999999999999999974 444
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0028 Score=65.96 Aligned_cols=123 Identities=24% Similarity=0.279 Sum_probs=80.6
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCC--CCCCCCCcccceecchhcccCCHHHHHHhhcCceEE
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGIL--NPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 640 (941)
.++.+|+.+.++.|+++|+++.++|+.....+..+.+.+|+. .. ...++.+.+.. .
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~------f~~i~~~~~~~----------------~ 143 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDD------VDAVVCPSDVA----------------A 143 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhcc------CCEEEcCCcCC----------------C
Confidence 368899999999999999999999999999999999999986 21 11222222110 0
Q ss_pred EecCHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHHHhCCccE--EecCCCc---H-HHHhccCEEeccCCchHHHH
Q 047874 641 ARSSPLDKLLMVQSLKQK-GHVVAVTGDGTNDAPALRAADIGL--SMGIQGT---E-VAKESSDIVIMDDNFSSVVT 710 (941)
Q Consensus 641 ~~~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~vgI--am~~~~~---~-~a~~~ad~vl~~~~~~~i~~ 710 (941)
.+-.|+-=....+.+.-. .+.+++|||+.+|..+-+.||+.. ++. .+. + .....+|+++. ++..+..
T Consensus 144 ~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i~--~~~~l~~ 217 (220)
T TIGR03351 144 GRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVLD--SVADLPA 217 (220)
T ss_pred CCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceeec--CHHHHHH
Confidence 112233223333333322 367999999999999999999986 332 221 1 22345777764 4555543
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0017 Score=67.48 Aligned_cols=92 Identities=20% Similarity=0.265 Sum_probs=64.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCC----HHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDN----VHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRV 639 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 639 (941)
.+.+++++.++.+++.|+++.++|||. ..++..+.+..|+...+. ...++.|...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~----f~vil~gd~~----------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM----NPVIFAGDKP----------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc----eeEEEcCCCC-----------------
Confidence 367889999999999999999999975 568899999999953211 1122222110
Q ss_pred EEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEe
Q 047874 640 MARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSM 684 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam 684 (941)
...+|.. .+++.+ .++++||..+|..+-+.||+- |.+
T Consensus 173 ----~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 173 ----GQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred ----CCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 0133444 334444 488999999999999999984 444
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0038 Score=64.83 Aligned_cols=114 Identities=20% Similarity=0.230 Sum_probs=76.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.+.++.|+++|+++.++|+.+...+...-+..|+... ..++.+.... ...-
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-------~~i~~~~~~~----------------~~KP 139 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-------EVFVTAERVK----------------RGKP 139 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-------cEEEEHHHhc----------------CCCC
Confidence 4679999999999999999999999988777777777777321 1222222110 1112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCc-HHHHhccCEEec
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGT-EVAKESSDIVIM 701 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~-~~a~~~ad~vl~ 701 (941)
.|+-=....+.+.-..+.+++|||+.+|+.+-+.||+- |++. .+. ......+|+++.
T Consensus 140 ~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLH 198 (218)
T ss_pred CcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEec
Confidence 33333444444544467899999999999999999984 6665 332 223345777765
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0015 Score=68.03 Aligned_cols=88 Identities=19% Similarity=0.211 Sum_probs=62.1
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCC----CHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEE
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGD----NVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 640 (941)
+.+++++.++.++++|+++.++|++ ...++..+.+.+|+... ...++.+.....
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~------f~~i~~~d~~~~---------------- 172 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM------NPVIFAGDKPGQ---------------- 172 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh------eeEEECCCCCCC----------------
Confidence 4455999999999999999999999 77799999999999642 112222221100
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc
Q 047874 641 ARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 641 ~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
..| +|. ..+++.+ .++++||..||..+-+.|++-
T Consensus 173 --~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 --YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred --CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 012 232 2344444 479999999999999999874
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0025 Score=65.03 Aligned_cols=94 Identities=18% Similarity=0.131 Sum_probs=68.2
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEE
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
.+++.+++.++++.|+++|+++.++||.+...+..+.+.+|+... ...++.+.. +..
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~------f~~~~~~~~-----------------~~~ 160 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEIL------FPVQIWMED-----------------CPP 160 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhh------CCEEEeecC-----------------CCC
Confidence 344667789999999999999999999999999999999998642 112222211 111
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhC
Q 047874 642 RSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAA 678 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A 678 (941)
+-.|+--..+++.+.-..+.+++|||+.+|+.+-++|
T Consensus 161 KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 161 KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 3345554556666665667899999999999887654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0048 Score=66.31 Aligned_cols=96 Identities=15% Similarity=0.094 Sum_probs=65.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++-|++.++++.|+++|+++.++||.....+..+-+..|+.... ...++.+.... ..+-
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~-----~d~i~~~~~~~----------------~~KP 159 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR-----PDHVVTTDDVP----------------AGRP 159 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC-----ceEEEcCCcCC----------------CCCC
Confidence 46789999999999999999999999999888888887765420 01122221110 0112
Q ss_pred CHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHHHhCCc
Q 047874 644 SPLDKLLMVQSLKQK-GHVVAVTGDGTNDAPALRAADI 680 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~v 680 (941)
.|+-=....+.+.-. .+.+++|||+.+|..+-+.||+
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 233323333333322 3579999999999999999997
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0066 Score=67.34 Aligned_cols=120 Identities=14% Similarity=0.150 Sum_probs=82.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+|+.+.++.|+++|+++.++|+.....+..+-+.+|+..- ...++.+.+.. ...-
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y------Fd~Iv~sddv~----------------~~KP 273 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF------FSVIVAAEDVY----------------RGKP 273 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH------ceEEEecCcCC----------------CCCC
Confidence 3679999999999999999999999999999999999998642 11222222211 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCcHH-HHhccCEEeccCCchHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGTEV-AKESSDIVIMDDNFSSV 708 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~~-a~~~ad~vl~~~~~~~i 708 (941)
.|+-=...++.+.-..+.+++|||+.+|+.+-+.|++- |++. .+... ....+|+++. ++..+
T Consensus 274 ~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~--s~~EL 337 (381)
T PLN02575 274 DPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVR--RLDEL 337 (381)
T ss_pred CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEEC--CHHHH
Confidence 33333445555555577899999999999999999984 4444 32222 2234788765 44444
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.012 Score=65.15 Aligned_cols=63 Identities=19% Similarity=0.230 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHhC-C---C---EEEEEcCCccCHHHHHh-----CCccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 646 LDKLLMVQSLKQK-G---H---VVAVTGDGTNDAPALRA-----ADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 646 ~~K~~iv~~l~~~-g---~---~v~~iGDg~ND~~~l~~-----A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
.+|...++.+.+. | . .++++||+.||.+||+. +++||+|+ ++... -.|++.+. +...+...++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~--dp~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLR--DPSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcC--CHHHHHHHHH
Confidence 3899988888764 2 1 25899999999999996 69999998 65432 25788876 5666766664
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.013 Score=58.81 Aligned_cols=127 Identities=17% Similarity=0.135 Sum_probs=72.2
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHH
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNV---------------HTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEE 629 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~ 629 (941)
+.+|+.+++++|+++|+++.++|+.+. .....+.+..|+... .++.......
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~--------~i~~~~~~~~----- 96 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD--------GIYYCPHHPE----- 96 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc--------eEEECCCCCC-----
Confidence 579999999999999999999998763 112223344554211 0100000000
Q ss_pred HHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCcH---HHHhcc--CEEeccC
Q 047874 630 RIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGTE---VAKESS--DIVIMDD 703 (941)
Q Consensus 630 ~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~---~a~~~a--d~vl~~~ 703 (941)
...-..+-.|+--..+.+.+.-..+.+++|||+.+|+.+-+.||+. |++. .+.. .....+ |+++.
T Consensus 97 ------~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii~-- 167 (181)
T PRK08942 97 ------DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVLD-- 167 (181)
T ss_pred ------CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceeec--
Confidence 0000112234434455555554567899999999999999999984 3332 2221 122234 77764
Q ss_pred CchHHHHHHH
Q 047874 704 NFSSVVTVLR 713 (941)
Q Consensus 704 ~~~~i~~~i~ 713 (941)
++..+.+++.
T Consensus 168 ~l~el~~~l~ 177 (181)
T PRK08942 168 SLADLPQALK 177 (181)
T ss_pred CHHHHHHHHH
Confidence 5666665543
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0044 Score=59.33 Aligned_cols=105 Identities=19% Similarity=0.205 Sum_probs=73.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcC----CCCCCCCCCcccceecchhcccCCHHHHHHhhcCceE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECG----ILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRV 639 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~g----i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 639 (941)
.++|+.++.++.+++.+++++++|+....-...+-+..+ |...+...+......+|.- .+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h----------------~i 136 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQH----------------SI 136 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCce----------------ee
Confidence 478999999999999999999999998888888777766 3221110001111111110 01
Q ss_pred EEec-C--HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEe
Q 047874 640 MARS-S--PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSM 684 (941)
Q Consensus 640 ~~~~-~--p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam 684 (941)
.... + -.+|...|+.+++..+.+.++|||+.|+++-+.+|+-.|-
T Consensus 137 ~~~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 137 KYTDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred ecCCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 1111 1 2479999999999999999999999999998888887753
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.011 Score=55.84 Aligned_cols=92 Identities=18% Similarity=0.146 Sum_probs=65.3
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCC--------HHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhc
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDN--------VHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIE 635 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 635 (941)
++.+++.++++.|+++|+++.++|+.. ...+..+.+.+|+... .....+ .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~-~-------------- 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID-------VLYACP-H-------------- 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE-------EEEECC-C--------------
Confidence 577999999999999999999999998 7778888899888521 011111 0
Q ss_pred CceEEEecCHHHHHHHHHHHH-hCCCEEEEEcC-CccCHHHHHhCCcc
Q 047874 636 SIRVMARSSPLDKLLMVQSLK-QKGHVVAVTGD-GTNDAPALRAADIG 681 (941)
Q Consensus 636 ~~~v~~~~~p~~K~~iv~~l~-~~g~~v~~iGD-g~ND~~~l~~A~vg 681 (941)
..+-.|+-=..+++.++ -..+.+++||| ..+|+.+-+.|++-
T Consensus 83 ----~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 ----CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred ----CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 01112333334455552 44578999999 69999999999873
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.013 Score=68.29 Aligned_cols=124 Identities=15% Similarity=0.108 Sum_probs=83.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+.. ...
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~------f~~i~~~d~v~-----------------~~~ 386 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQW------VTETFSIEQIN-----------------SLN 386 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhh------cceeEecCCCC-----------------CCC
Confidence 5789999999999999999999999999999999999998642 11223222211 012
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEecC-CCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMGI-QGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.|+--....+.+ ..+.++++||+.+|..+-+.|++ .|++.. ...+.....+|+++. ++..+.+++..
T Consensus 387 kP~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~~ 455 (459)
T PRK06698 387 KSDLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILST 455 (459)
T ss_pred CcHHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHHH
Confidence 233222222222 24679999999999999999998 455531 122222345888875 66777666543
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.01 Score=60.62 Aligned_cols=96 Identities=16% Similarity=0.247 Sum_probs=67.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.++++.|+++|+++.++|+-+........+.+|+... ...++.+.+.. ...-
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~------fd~i~~s~~~~----------------~~KP 149 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP------FDAVLSADAVR----------------AYKP 149 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh------hheeEehhhcC----------------CCCC
Confidence 4679999999999999999999999999999999999998532 11122221110 0111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
.|+-=..+.+.+.-..+.+++|||+.+|+.+-++||+-
T Consensus 150 ~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 150 APQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred CHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 22222344444444457899999999999999999885
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0072 Score=66.19 Aligned_cols=109 Identities=14% Similarity=-0.021 Sum_probs=76.5
Q ss_pred eccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceE
Q 047874 560 GLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRV 639 (941)
Q Consensus 560 ~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 639 (941)
...+++.+++.++++.|++.|++++++||++...+..+.+.+|+..... ..+.|.+.. . ..+... -
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f------~~i~~~~~~----~---~~~~~~-~ 248 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF------DDLIGRPPD----M---HFQREQ-G 248 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch------hhhhCCcch----h---hhcccC-C
Confidence 3577899999999999999999999999999999999999998864110 011111100 0 000000 0
Q ss_pred EEecCHHHHHHHHHHHHh-CCCEEEEEcCCccCHHHHHhCCccE
Q 047874 640 MARSSPLDKLLMVQSLKQ-KGHVVAVTGDGTNDAPALRAADIGL 682 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~~-~g~~v~~iGDg~ND~~~l~~A~vgI 682 (941)
-.+-.|+-+...++.+.. ....++|+||..+|+.+-+.|++-.
T Consensus 249 ~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 249 DKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 124456677777776544 3478999999999999999999863
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0084 Score=62.48 Aligned_cols=100 Identities=12% Similarity=0.050 Sum_probs=68.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|+++|+++.++|+.+...+...-+..|+... ...++.+.+... ..-
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~------fd~iv~s~~~~~----------------~KP 150 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH------LDLLLSTHTFGY----------------PKE 150 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH------CCEEEEeeeCCC----------------CCC
Confidence 5679999999999999999999999998888888888887531 111222111100 011
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc--EEec
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG--LSMG 685 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg--Iam~ 685 (941)
.|+-=..+.+.+.-..+.+++|||+.+|+.+-+.||+. +++.
T Consensus 151 ~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~ 194 (224)
T PRK14988 151 DQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVT 194 (224)
T ss_pred CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEe
Confidence 22222333344433456799999999999999999995 4454
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.018 Score=56.92 Aligned_cols=112 Identities=12% Similarity=0.080 Sum_probs=72.0
Q ss_pred EEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCC-CHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHH
Q 047874 554 TLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGD-NVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIA 632 (941)
Q Consensus 554 ~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 632 (941)
.......-+-++.+++.+.++.|+++|+++.++|+. ....+..+.+.+|+........ +..
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~------------------~~~ 96 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVP------------------MHS 96 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCccc------------------HHH
Confidence 344445555677899999999999999999999987 8888999999999852110000 000
Q ss_pred hhcCceEEEecCHHHH--HHHHHHHHhC------CCEEEEEcCCccCHHHHHhCCccEEe
Q 047874 633 KIESIRVMARSSPLDK--LLMVQSLKQK------GHVVAVTGDGTNDAPALRAADIGLSM 684 (941)
Q Consensus 633 ~~~~~~v~~~~~p~~K--~~iv~~l~~~------g~~v~~iGDg~ND~~~l~~A~vgIam 684 (941)
.+ ...+.++..+..| ..+.+.+.+. .+.+++|||+..|+.+-++|++-...
T Consensus 97 ~F-d~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 97 LF-DDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred hc-eeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 00 0011111111112 2334444432 46899999999999999999986543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.016 Score=71.54 Aligned_cols=38 Identities=11% Similarity=-0.008 Sum_probs=32.6
Q ss_pred CCCCcchHHHHHHH-HhcCCeEEEEcCCCHHHHHHHHHH
Q 047874 563 DPCRPGVRAAVESC-RNAGVNVKMVTGDNVHTARAIAIE 600 (941)
Q Consensus 563 d~~~~~~~~~I~~l-~~aGi~v~i~TGd~~~~a~~ia~~ 600 (941)
-.+.+++.+++++| ++.|+.|+++|||...+.......
T Consensus 615 ~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 615 KSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 35678999999997 778999999999999998887754
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0099 Score=61.82 Aligned_cols=100 Identities=17% Similarity=0.193 Sum_probs=69.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.++++.|+++|++++++|+-+...+....+.+|+... ...++.+.+.. ..+-
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~------f~~i~~~~~~~----------------~~KP 151 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDF------FDAVITSEEEG----------------VEKP 151 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHh------ccEEEEeccCC----------------CCCC
Confidence 4689999999999999999999999998888888899998642 11122222110 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhCCc-cEEec
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAADI-GLSMG 685 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~v-gIam~ 685 (941)
.|+-=..+.+.+.-..+.+++|||.. +|+.+-++||+ +|.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred CHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 23322333444433456899999998 99999999998 45554
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.015 Score=57.89 Aligned_cols=100 Identities=13% Similarity=-0.016 Sum_probs=60.9
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHH--------HHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVH--------TARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIES 636 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 636 (941)
+-|++.+++++|++.|+++.++|+.... ......+..|+..-.. .....+.+.
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~-----~~~~~~~~~-------------- 89 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL-----CPHKHGDGC-------------- 89 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE-----CcCCCCCCC--------------
Confidence 5799999999999999999999987631 2233344555542000 000000000
Q ss_pred ceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEec
Q 047874 637 IRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMG 685 (941)
Q Consensus 637 ~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~ 685 (941)
-..+-.|+-=..+++.+.-..+.+++|||+.+|..+-++|++- |++.
T Consensus 90 --~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~ 137 (173)
T PRK06769 90 --ECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVR 137 (173)
T ss_pred --CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 0112233333445555544456899999999999999999985 4443
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.041 Score=54.51 Aligned_cols=38 Identities=13% Similarity=0.170 Sum_probs=35.1
Q ss_pred chHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 047874 568 GVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILN 605 (941)
Q Consensus 568 ~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~ 605 (941)
.+...+.+|+++|++|+.+|.........+-+++|+..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 47789999999999999999999999999999999973
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.0088 Score=60.21 Aligned_cols=94 Identities=13% Similarity=0.249 Sum_probs=61.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.++++.|+++|+++.++|+... +....+.+|+... ...++.+.+.. ..+-
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~------f~~~~~~~~~~----------------~~kp 142 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDY------FDAIVDPAEIK----------------KGKP 142 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhh------CcEEEehhhcC----------------CCCC
Confidence 5679999999999999999999997543 4567788887532 11222222110 1112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
.|+-=....+.+.-..+.+++|||+.+|+.+-+.||+-
T Consensus 143 ~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 143 DPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 23322333333333345799999999999999999884
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.016 Score=58.00 Aligned_cols=94 Identities=21% Similarity=0.240 Sum_probs=64.3
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.+.++.|+++|++++++|+..... ..+..++|+... ...++.+.+.. ...-
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~------f~~i~~~~~~~----------------~~KP 141 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL------FDVVIFSGDVG----------------RGKP 141 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH------CCEEEEcCCCC----------------CCCC
Confidence 567999999999999999999999988887 666666887531 11222221110 1112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI 680 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v 680 (941)
+|+--..+.+.+.-....++++||...|+.+-++||+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 142 DPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred CHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 2333344445554456789999999999999999887
|
HAD subfamilies caused by an overly broad single model. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.024 Score=59.02 Aligned_cols=124 Identities=15% Similarity=0.135 Sum_probs=76.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.++++.|+ +|+++.++|+.....+...-+.+|+... ...++.+.+.. ...-
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~------fd~v~~~~~~~----------------~~KP 151 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDY------FDLLVISEQVG----------------VAKP 151 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHH------cCEEEEECccC----------------CCCC
Confidence 36799999999999 6899999999998888888888888531 11122111110 0111
Q ss_pred CHHHHHHHHHHHHhC-CCEEEEEcCCc-cCHHHHHhCCcc-EEecCCCcH-HHHhccCEEeccCCchHHHHHH
Q 047874 644 SPLDKLLMVQSLKQK-GHVVAVTGDGT-NDAPALRAADIG-LSMGIQGTE-VAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~-g~~v~~iGDg~-ND~~~l~~A~vg-Iam~~~~~~-~a~~~ad~vl~~~~~~~i~~~i 712 (941)
+|+-=..+++.+.-. .+.+++|||+. +|+.+-+.||+- |.+...+.. .....+|+++. ++..+.+++
T Consensus 152 ~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 222 (224)
T PRK09449 152 DVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLL 222 (224)
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHH
Confidence 222223333444322 35799999998 799999999985 444311211 11124677775 566666544
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.013 Score=58.92 Aligned_cols=94 Identities=19% Similarity=0.267 Sum_probs=61.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.++++.|+++|+++.++|+. ..+..+.+.+|+..- ...++.+.... ..+-
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~------f~~v~~~~~~~----------------~~kp 143 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDY------FDAIVDADEVK----------------EGKP 143 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHH------CCEeeehhhCC----------------CCCC
Confidence 57899999999999999999999997 567778888888531 01111111100 0111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
.|+-=....+.+.-..+.+++|||+.+|+.+-+.||+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 12211223333333346799999999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.033 Score=60.36 Aligned_cols=118 Identities=19% Similarity=0.160 Sum_probs=74.3
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.+.++.|++.|+++.++|+.+......+-+..+...-. ..-.++.+.+.. ..+-
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~----~~~~~v~~~~~~----------------~~KP 203 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERA----QGLDVFAGDDVP----------------KKKP 203 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccccc----CceEEEeccccC----------------CCCC
Confidence 46799999999999999999999999888887776665322100 000111221110 1122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCc--HHHHhccCEEec
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGT--EVAKESSDIVIM 701 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~--~~a~~~ad~vl~ 701 (941)
.|+-=..+.+.+.-..+.+++|||+.+|+.+-+.||+.......+. ......+|+++.
T Consensus 204 ~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 204 DPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred CHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 3333344555555456789999999999999999998644321222 111245788875
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.011 Score=58.51 Aligned_cols=96 Identities=19% Similarity=0.254 Sum_probs=69.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|+++|++++++|+.+........+.+|+... ...++.+.+... .+-
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~------f~~i~~~~~~~~----------------~Kp 134 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY------FDEIISSDDVGS----------------RKP 134 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG------CSEEEEGGGSSS----------------STT
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc------cccccccchhhh----------------hhh
Confidence 4679999999999999999999999999999999999998731 112222221110 011
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
.|+-=..+++.+.-..+.+++|||+..|+.+-+.||+-
T Consensus 135 ~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 135 DPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp SHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 22333445555554567899999999999999999874
|
... |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.035 Score=55.39 Aligned_cols=122 Identities=20% Similarity=0.116 Sum_probs=65.0
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHH---------------HHHHHHHHcCCCCCCCCCCcccceecc-hhcccCCHH
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVH---------------TARAIAIECGILNPDVDLNKDEAVIEG-VQFRSLSAE 628 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~---------------~a~~ia~~~gi~~~~~~~~~~~~~~~g-~~~~~~~~~ 628 (941)
+.|++.++|+.|+++|+++.++|.-+.. ....+..+.|+....... ......| ..+..
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~--~~~~~~~~~~~~~---- 100 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYY--CPHHPEGVEEFRQ---- 100 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEE--CCCCCcccccccC----
Confidence 5689999999999999999999987631 112333344443110000 0000000 00000
Q ss_pred HHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc--EEecCCCcH---HHHhccCEEec
Q 047874 629 ERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG--LSMGIQGTE---VAKESSDIVIM 701 (941)
Q Consensus 629 ~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg--Iam~~~~~~---~a~~~ad~vl~ 701 (941)
. .-..+-.|+-=....+.+.-..+.++||||..+|+.+-++|++. |.+. .+.. .....+|+++.
T Consensus 101 -------~-~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~~~ad~~i~ 169 (176)
T TIGR00213 101 -------V-CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAENIADWVLN 169 (176)
T ss_pred -------C-CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccccccCCEEec
Confidence 0 00011122222333333333457899999999999999999985 3443 2321 12234788875
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.029 Score=63.41 Aligned_cols=115 Identities=17% Similarity=0.152 Sum_probs=74.2
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHH-HcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAI-ECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
++.+++.+.++.|++.|+++.++|+.....+....+ ..|+... .+.++.+.+.. ...
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~------Fd~ii~~d~v~----------------~~K 150 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES------FSVIVGGDEVE----------------KGK 150 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh------CCEEEehhhcC----------------CCC
Confidence 357999999999999999999999999888877665 5777431 11222222110 111
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCc--HHHHhccCEEec
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGT--EVAKESSDIVIM 701 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~--~~a~~~ad~vl~ 701 (941)
-.|+-=..+++.+.-..+.+++|||+.+|+.+-+.||+. |++. .+. ......+|.++.
T Consensus 151 P~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~-~g~~~~~~~~~ad~~i~ 211 (382)
T PLN02940 151 PSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVP-SIPKQTHLYSSADEVIN 211 (382)
T ss_pred CCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEEC-CCCcchhhccCccEEeC
Confidence 223333444444444467899999999999999999986 4444 222 222234566554
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.046 Score=57.89 Aligned_cols=87 Identities=14% Similarity=0.138 Sum_probs=60.3
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHH---HHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCce
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVH---TARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIR 638 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 638 (941)
..++-|++.+.++.+++.|+++.++|++... .+....++.|+..... + .
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~----d------------------------~ 167 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE----E------------------------H 167 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc----c------------------------e
Confidence 3456799999999999999999999998844 3446667788864210 0 1
Q ss_pred EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHH
Q 047874 639 VMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALR 676 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~ 676 (941)
++.|-....|..-.+.+.+.-..++++||..+|.....
T Consensus 168 lllr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 168 LLLKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred EEeCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 33333333455555566555567999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.026 Score=54.47 Aligned_cols=99 Identities=21% Similarity=0.203 Sum_probs=60.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHH
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNV---------------HTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAE 628 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~ 628 (941)
++.+++.++++.|+++|+++.++|+.+. ..+..+.+.+|+.... ..........
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~---- 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG-------VLFCPHHPAD---- 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE-------EEECCCCCCC----
Confidence 3679999999999999999999998763 4556677788875210 0000000000
Q ss_pred HHHHhhcCceE-EEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccE
Q 047874 629 ERIAKIESIRV-MARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGL 682 (941)
Q Consensus 629 ~~~~~~~~~~v-~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 682 (941)
.. ...-.|+-=..+++.+.-..+.+++|||...|+.+-+.|++-.
T Consensus 96 ---------~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 96 ---------NCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 00 0011122222333333333467999999999999999998853
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.029 Score=58.37 Aligned_cols=121 Identities=12% Similarity=0.071 Sum_probs=75.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|++. +++.++|+-....+..+.+++|+...- +.++.+.+.. ..+-
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f------d~i~~~~~~~----------------~~KP 153 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF------DDIFVSEDAG----------------IQKP 153 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc------CEEEEcCccC----------------CCCC
Confidence 4679999999999999 999999999999999999999986421 1121111100 0112
Q ss_pred CHHHHHHHHHHH-HhCCCEEEEEcCCc-cCHHHHHhCCcc-EEecC-CCcHHHHhccCEEeccCCchHHH
Q 047874 644 SPLDKLLMVQSL-KQKGHVVAVTGDGT-NDAPALRAADIG-LSMGI-QGTEVAKESSDIVIMDDNFSSVV 709 (941)
Q Consensus 644 ~p~~K~~iv~~l-~~~g~~v~~iGDg~-ND~~~l~~A~vg-Iam~~-~~~~~a~~~ad~vl~~~~~~~i~ 709 (941)
.|+-=...++.+ .-..+.+++|||+. +|..+-+.+|+- |.+.. ...+.....+|+++. ++..+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~ 221 (224)
T TIGR02254 154 DKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELY 221 (224)
T ss_pred CHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHH
Confidence 222223444444 33346799999998 899999999973 44431 111122234566654 444444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.047 Score=56.13 Aligned_cols=86 Identities=16% Similarity=0.173 Sum_probs=57.1
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHH---HHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceE
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHT---ARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRV 639 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 639 (941)
-+.-+++.++++.+++.|++|+++|||.... +..--++.|+..- ..+++.+..-
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~------~~LiLR~~~d----------------- 175 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW------KHLILRGLED----------------- 175 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc------CeeeecCCCC-----------------
Confidence 3677999999999999999999999999766 4444556777641 1122211100
Q ss_pred EEecC-HHHHHHHHHHHHhCCCE-EEEEcCCccCH
Q 047874 640 MARSS-PLDKLLMVQSLKQKGHV-VAVTGDGTNDA 672 (941)
Q Consensus 640 ~~~~~-p~~K~~iv~~l~~~g~~-v~~iGDg~ND~ 672 (941)
.+.+ .+-|.+.-+.+.+.|++ ++.+||-.+|.
T Consensus 176 -~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 176 -SNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred -CCchHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 0001 12277777777777764 56699999986
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.033 Score=55.27 Aligned_cols=90 Identities=18% Similarity=0.164 Sum_probs=63.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCC-HHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDN-VHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
.+-+++.++++.|++.|++++++|+.+ ...+..+.+.+|+... .+ ...
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~-----------~~--------------------~~K 91 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL-----------PH--------------------AVK 91 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE-----------cC--------------------CCC
Confidence 567999999999999999999999988 6777788888876420 00 011
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhCCcc-EEe
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAADIG-LSM 684 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~vg-Iam 684 (941)
-.|+-=..+.+.+.-..+.+++|||.. .|..+-+.||+- |.+
T Consensus 92 P~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v 135 (170)
T TIGR01668 92 PPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILV 135 (170)
T ss_pred CChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEE
Confidence 122222233333333356799999998 799999999983 444
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.065 Score=56.62 Aligned_cols=39 Identities=28% Similarity=0.366 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhCCCEEEEEcC----CccCHHHHHh-CCccEEec
Q 047874 646 LDKLLMVQSLKQKGHVVAVTGD----GTNDAPALRA-ADIGLSMG 685 (941)
Q Consensus 646 ~~K~~iv~~l~~~g~~v~~iGD----g~ND~~~l~~-A~vgIam~ 685 (941)
.+|+..++.++ ..+.|+++|| |.||.+||+. --.|+++.
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 48999999999 7889999999 8999999997 55688886
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.026 Score=55.32 Aligned_cols=96 Identities=18% Similarity=0.079 Sum_probs=59.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCC---------------HHHHHHHHHHcCCCCCCCCCCcccceec----chhccc
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDN---------------VHTARAIAIECGILNPDVDLNKDEAVIE----GVQFRS 624 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~----g~~~~~ 624 (941)
++-+++.++++.|+++|+++.++|.-. ...+..+.+.+|+.-. ..++. ..+..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd-------~ii~~~~~~~~~~~- 100 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD-------DVLICPHFPDDNCD- 100 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee-------EEEECCCCCCCCCC-
Confidence 356899999999999999999999852 3456667777787521 01110 00000
Q ss_pred CCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccE
Q 047874 625 LSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGL 682 (941)
Q Consensus 625 ~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 682 (941)
+..-.|+-=..+++.+.-..+.+++|||+.+|..+-++|++-.
T Consensus 101 ---------------~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~ 143 (161)
T TIGR01261 101 ---------------CRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRG 143 (161)
T ss_pred ---------------CCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeE
Confidence 0001111112222332223457999999999999999999854
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.016 Score=59.93 Aligned_cols=106 Identities=21% Similarity=0.281 Sum_probs=68.0
Q ss_pred CCCcchHHHHHHH--HhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEE
Q 047874 564 PCRPGVRAAVESC--RNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 564 ~~~~~~~~~I~~l--~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
|+.|+.+++++.+ ++.|+.+.++|.-+..-...+-+.-|+... ...+.+....-+-... +.-..-...-+.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~------f~~I~TNpa~~~~~G~-l~v~pyh~h~C~ 143 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDC------FSEIFTNPACFDADGR-LRVRPYHSHGCS 143 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccc------cceEEeCCceecCCce-EEEeCccCCCCC
Confidence 5678999999999 568999999999999999999999998642 1122222111000000 000000001133
Q ss_pred ecCH-HHHHHHHHHHHhC----C---CEEEEEcCCccCH-HHHH
Q 047874 642 RSSP-LDKLLMVQSLKQK----G---HVVAVTGDGTNDA-PALR 676 (941)
Q Consensus 642 ~~~p-~~K~~iv~~l~~~----g---~~v~~iGDg~ND~-~~l~ 676 (941)
++.| .=|..+++.+.+. | ..|++||||.||. |+++
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 4443 4689988888765 4 6999999999995 5543
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.15 Score=54.26 Aligned_cols=49 Identities=27% Similarity=0.343 Sum_probs=38.7
Q ss_pred EEEeccCC----CCcchHHHHHHHHhcCCeEEEEcCCCHHH---HHHHHHHcCCCC
Q 047874 557 GLVGLKDP----CRPGVRAAVESCRNAGVNVKMVTGDNVHT---ARAIAIECGILN 605 (941)
Q Consensus 557 G~i~~~d~----~~~~~~~~I~~l~~aGi~v~i~TGd~~~~---a~~ia~~~gi~~ 605 (941)
|.+.-.+. +-|++.++|++|+++|++++++||++..+ .....+++|+..
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 55555566 88999999999999999999999977665 455556678753
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.2 Score=55.22 Aligned_cols=46 Identities=20% Similarity=0.148 Sum_probs=36.2
Q ss_pred CcEEEEEEeccC--CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHH
Q 047874 552 GLTLLGLVGLKD--PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIA 598 (941)
Q Consensus 552 ~l~~lG~i~~~d--~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia 598 (941)
|.|++-++.-.| .+.+++.++|++|. .|++++++|||.......+.
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 445554444333 47899999999999 78999999999999998874
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.051 Score=51.79 Aligned_cols=110 Identities=16% Similarity=0.232 Sum_probs=76.8
Q ss_pred HHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHH
Q 047874 519 IQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIA 598 (941)
Q Consensus 519 ~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia 598 (941)
.+.+..+|++.+.+-.. -|++..= ..+..|++++=+++++++|+++.++|..+...+...+
T Consensus 20 ~~~L~~~Gikgvi~DlD-----------------NTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~ 80 (175)
T COG2179 20 PDILKAHGIKGVILDLD-----------------NTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAA 80 (175)
T ss_pred HHHHHHcCCcEEEEecc-----------------Cceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhh
Confidence 35677889988876431 1222211 2345788999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHH--HHHHHHHHhCCCEEEEEcCCc-cCHHHH
Q 047874 599 IECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDK--LLMVQSLKQKGHVVAVTGDGT-NDAPAL 675 (941)
Q Consensus 599 ~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K--~~iv~~l~~~g~~v~~iGDg~-ND~~~l 675 (941)
+.+|++. ++--..|-.+ .+.++.++-..+.|+||||.. .|+-+=
T Consensus 81 ~~l~v~f---------------------------------i~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlgg 127 (175)
T COG2179 81 EKLGVPF---------------------------------IYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGG 127 (175)
T ss_pred hhcCCce---------------------------------eecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcc
Confidence 9999975 3333344433 234444444577999999974 477665
Q ss_pred HhCCc
Q 047874 676 RAADI 680 (941)
Q Consensus 676 ~~A~v 680 (941)
+.||+
T Consensus 128 nr~G~ 132 (175)
T COG2179 128 NRAGM 132 (175)
T ss_pred cccCc
Confidence 55555
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.05 Score=55.70 Aligned_cols=95 Identities=16% Similarity=0.161 Sum_probs=61.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++-|++.++++.|+++|+++.++|+-... .....+.+|+... ...++.+.+.. ..+-
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~------fd~i~~s~~~~----------------~~KP 161 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY------FDFVVTSYEVG----------------AEKP 161 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh------cceEEeecccC----------------CCCC
Confidence 46799999999999999999999986654 4677788887431 01111111100 0111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhCCcc
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAADIG 681 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~vg 681 (941)
+|+-=..+++.+.-....+++|||+. +|+.+-++||+-
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 162 DPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred CHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 22222333344433457899999997 899999988764
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.051 Score=52.82 Aligned_cols=90 Identities=17% Similarity=0.220 Sum_probs=58.4
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
..+++.+.++.|++.|+++.++|+.....+....+.. +.... ..++.... +..+-.
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f------~~i~~~~~-----------------~~~Kp~ 120 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYF------DLILGSDE-----------------FGAKPE 120 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcC------cEEEecCC-----------------CCCCcC
Confidence 3478999999999999999999999999988888775 33210 11111100 111122
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCC
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAAD 679 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~ 679 (941)
|+-=..+.+.+.-.. .+++|||+.+|..+-+.|+
T Consensus 121 ~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 121 PEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 222233333333334 7999999999999888775
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.19 Score=53.05 Aligned_cols=94 Identities=16% Similarity=0.182 Sum_probs=61.5
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHH--HHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhh
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTAR--AIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKI 634 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~--~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 634 (941)
|.+.-.+.+-|++.+++++|+++|+++.++|......+. ...+++|+..+. ...
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~-----~~~------------------- 72 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL-----PEM------------------- 72 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc-----cce-------------------
Confidence 556667788999999999999999999999996655444 566888886411 011
Q ss_pred cCceEEEecCHHHHHHHHHHHHh---CCCEEEEEcCCccCHHHHHhCC
Q 047874 635 ESIRVMARSSPLDKLLMVQSLKQ---KGHVVAVTGDGTNDAPALRAAD 679 (941)
Q Consensus 635 ~~~~v~~~~~p~~K~~iv~~l~~---~g~~v~~iGDg~ND~~~l~~A~ 679 (941)
+++.. ......+.+.+++ .+..+.++||+.+|...+..++
T Consensus 73 ----Ii~s~-~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 73 ----IISSG-EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ----EEccH-HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 12111 1111222222232 2467999999999998886443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.078 Score=54.74 Aligned_cols=98 Identities=14% Similarity=0.156 Sum_probs=67.0
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcC---CCCCCCCCCcccceecchhcccCCHHHHHHhhcCce
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECG---ILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIR 638 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 638 (941)
+-++.+++.+++++|+++|+++.++|..+....+.+.+..+ +..- +++ .+ ...
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~----------f~~-------------~f-d~~ 148 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY----------FSG-------------YF-DTT 148 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh----------cce-------------EE-EeC
Confidence 34688999999999999999999999998887777666542 2110 000 00 001
Q ss_pred EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEE
Q 047874 639 VMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS 683 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 683 (941)
+...-.|+-=..+.+.+.-..+.++++||...|+.+-++||+-..
T Consensus 149 ~g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 149 VGLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred cccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 122234444455555555456789999999999999999999543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.025 Score=54.62 Aligned_cols=95 Identities=12% Similarity=-0.053 Sum_probs=64.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
+++|++.+.++.|+ .++++.++|+-+...+..+.+.+|+...- ...++.+.+.. +.
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~-----f~~i~~~~d~~------------------~~ 100 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF-----GYRRLFRDECV------------------FV 100 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE-----eeeEEECcccc------------------cc
Confidence 46999999999999 57999999999999999999999874310 01222222211 11
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEE
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS 683 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 683 (941)
.|. =.+.++.+....+.+++|||..+|..+-+.|++-|.
T Consensus 101 KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 101 KGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred CCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 121 111233333446789999999999998877766553
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.077 Score=49.82 Aligned_cols=39 Identities=10% Similarity=0.152 Sum_probs=34.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCC-CHHHHHHHHHHcC
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGD-NVHTARAIAIECG 602 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd-~~~~a~~ia~~~g 602 (941)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 7777777777776
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.059 Score=56.97 Aligned_cols=68 Identities=21% Similarity=0.236 Sum_probs=50.2
Q ss_pred EEecCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhC--------CccEEecCCCcHHHHhccCEEeccCCchH
Q 047874 640 MARSSPLDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAA--------DIGLSMGIQGTEVAKESSDIVIMDDNFSS 707 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A--------~vgIam~~~~~~~a~~~ad~vl~~~~~~~ 707 (941)
-.+..+.+|...++.+.+. ...++++||+.||.+|++.+ +.||+|+ .+ ..+..|++++. +...
T Consensus 160 e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~~ 234 (244)
T TIGR00685 160 ELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQQ 234 (244)
T ss_pred EEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHHH
Confidence 3344567899888887654 35799999999999999999 5788885 23 23566899887 5566
Q ss_pred HHHHH
Q 047874 708 VVTVL 712 (941)
Q Consensus 708 i~~~i 712 (941)
+.+.+
T Consensus 235 v~~~L 239 (244)
T TIGR00685 235 VLEFL 239 (244)
T ss_pred HHHHH
Confidence 66555
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.13 Score=56.84 Aligned_cols=98 Identities=20% Similarity=0.081 Sum_probs=58.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHH
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGD---------------NVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAE 628 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~ 628 (941)
++.|++.++++.|+++|+++.++|+- ....+..+.+..|+... ...+......+
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd-------~i~i~~~~~sd---- 98 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD-------EVLICPHFPED---- 98 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee-------eEEEeCCcCcc----
Confidence 56899999999999999999999983 23345566777776421 01110000000
Q ss_pred HHHHhhcCceEEEe-cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc
Q 047874 629 ERIAKIESIRVMAR-SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 629 ~~~~~~~~~~v~~~-~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
...++ ..|+-=..+.+.+.-....+.||||+.+|..+-+.|++-
T Consensus 99 ---------~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 99 ---------NCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred ---------cCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 00011 111111122222222347899999999999999999985
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.11 Score=53.97 Aligned_cols=96 Identities=16% Similarity=0.205 Sum_probs=59.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHH-HHHHcCCCCCCCCCCcccceecch--hcccCCHHHHHHhhcCceEE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARA-IAIECGILNPDVDLNKDEAVIEGV--QFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~v~ 640 (941)
++.|++.+.|+.|+++|+++.++||-....... ..+..++... ...++.+. +.. .
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~------f~~i~~~~~~~~~----------------~ 135 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL------MHHVVTGDDPEVK----------------Q 135 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh------CCEEEECChhhcc----------------C
Confidence 467999999999999999999999987654432 2222233210 01112111 100 0
Q ss_pred EecCHHHHHHHHHHHH---hCCCEEEEEcCCccCHHHHHhCCcc
Q 047874 641 ARSSPLDKLLMVQSLK---QKGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 641 ~~~~p~~K~~iv~~l~---~~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
..-.|+-=...++.+. -..+.+++|||+..|+.+-++||+-
T Consensus 136 ~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 136 GKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred CCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCe
Confidence 1112333334444443 2346899999999999999999985
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.15 Score=50.32 Aligned_cols=93 Identities=10% Similarity=0.048 Sum_probs=57.8
Q ss_pred CcchHHHHHHHHhcCCeEEEEcCCCHH------------HHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHh
Q 047874 566 RPGVRAAVESCRNAGVNVKMVTGDNVH------------TARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAK 633 (941)
Q Consensus 566 ~~~~~~~I~~l~~aGi~v~i~TGd~~~------------~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 633 (941)
-+++.++++.|+++|+++.++|..+.. .+..+.+.+|+.. ..++.+...
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--------~~ii~~~~~----------- 104 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--------QVLAATHAG----------- 104 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--------EEEEecCCC-----------
Confidence 489999999999999999999976542 4566778888742 111111100
Q ss_pred hcCceEEEecCHHHHHHHHHHHH--hCCCEEEEEcCCc--------cCHHHHHhCCccE
Q 047874 634 IESIRVMARSSPLDKLLMVQSLK--QKGHVVAVTGDGT--------NDAPALRAADIGL 682 (941)
Q Consensus 634 ~~~~~v~~~~~p~~K~~iv~~l~--~~g~~v~~iGDg~--------ND~~~l~~A~vgI 682 (941)
....-.|+-=..+.+.+. -..+.++||||.. +|..+-++||+-.
T Consensus 105 -----~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 -----LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred -----CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000111222223333333 2236799999986 6999988887653
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.22 Score=63.76 Aligned_cols=132 Identities=17% Similarity=0.194 Sum_probs=86.4
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+-+++.+.++.|+++|+++.++|+.....+....++.|+.... ...++.+.+.. ...-.
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~-----Fd~iv~~~~~~----------------~~KP~ 220 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM-----FDAIVSADAFE----------------NLKPA 220 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH-----CCEEEECcccc----------------cCCCC
Confidence 5689999999999999999999999999999999999985210 11222222111 01122
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEecCC--CcHHHHhccCEEeccCCchHHHHHHHHHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMGIQ--GTEVAKESSDIVIMDDNFSSVVTVLRWGRC 717 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~~~--~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~ 717 (941)
|+-=....+.+.-..+.+++|||..+|+.+-+.|++ .|++... ..+.....+|+++.+-..-.+..++..|-.
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~ 296 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGSD 296 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCC
Confidence 333334455555456789999999999999999998 4555421 122334567888875544445555544433
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.11 Score=46.32 Aligned_cols=49 Identities=22% Similarity=0.297 Sum_probs=36.4
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHH---HHcCCCC
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIA---IECGILN 605 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia---~~~gi~~ 605 (941)
|++...+++=|++.++|+.|+++|++++++|..+..+...++ +++|+..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 455567788899999999999999999999998766655554 5667764
|
... |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.31 Score=46.84 Aligned_cols=102 Identities=18% Similarity=0.241 Sum_probs=70.1
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHH---HHHHc-----CCCCCCCCCCcccceecchh-cccCCHHHHHHh
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARA---IAIEC-----GILNPDVDLNKDEAVIEGVQ-FRSLSAEERIAK 633 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~---ia~~~-----gi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~ 633 (941)
|..++++.+..+++++.|.+++.+|+|+...+.. ..++. +++. .....+... +..+..|
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~-------Gpv~~sP~~l~~al~rE----- 93 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD-------GPVLLSPDSLFSALHRE----- 93 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC-------CCEEECCcchhhhhhcc-----
Confidence 6889999999999999999999999999765543 33333 3332 222222111 1111111
Q ss_pred hcCceEEEecCHHHHHHHHHHHHhC-----CCEEEEEcCCccCHHHHHhCCcc
Q 047874 634 IESIRVMARSSPLDKLLMVQSLKQK-----GHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 634 ~~~~~v~~~~~p~~K~~iv~~l~~~-----g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
+..+-..+.|...++.++.. ....++.|+..+|+.+.++++|-
T Consensus 94 -----vi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 94 -----VISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred -----ccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 44555557899999999864 45778899999999999988764
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.4 Score=50.68 Aligned_cols=48 Identities=17% Similarity=0.277 Sum_probs=41.8
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc---CCC
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIEC---GIL 604 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~---gi~ 604 (941)
|++.-.+.+-|++.++++.|+++|++++++|++...+...+++++ |+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 666667788999999999999999999999999998888877774 664
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.6 Score=49.48 Aligned_cols=50 Identities=12% Similarity=0.090 Sum_probs=42.4
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCCeEEEEcC---CCHHHHHHHHHHcCCCCC
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGVNVKMVTG---DNVHTARAIAIECGILNP 606 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TG---d~~~~a~~ia~~~gi~~~ 606 (941)
|.+.-.+.+-+++.++|++|+++|++++++|| +.........+++|+...
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 55555677778999999999999999999996 888888888899998754
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.13 Score=52.99 Aligned_cols=100 Identities=19% Similarity=0.205 Sum_probs=59.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHH--HHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHT--ARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
++.|++.+.++.|+++|+++.++|+..... ........++... .+.++.+.+. -..
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~------fd~v~~s~~~----------------~~~ 151 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL------FDAVVESCLE----------------GLR 151 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh------CCEEEEeeec----------------CCC
Confidence 568999999999999999999999875432 2222223333211 0011111000 001
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEec
Q 047874 642 RSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMG 685 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~ 685 (941)
+-.|+-=..+.+.+.-..+.+++|||...|+.+-++||+- |.+.
T Consensus 152 KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~ 196 (211)
T TIGR02247 152 KPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVS 196 (211)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 1223332334444443456799999999999999999984 4443
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=92.86 E-value=0.29 Score=47.78 Aligned_cols=86 Identities=17% Similarity=0.097 Sum_probs=65.3
Q ss_pred cCCCCcchHHHHHHHHhcCC--eEEEEcCC-------CHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHH
Q 047874 562 KDPCRPGVRAAVESCRNAGV--NVKMVTGD-------NVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIA 632 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi--~v~i~TGd-------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 632 (941)
++++.++..+.+++|++.+. +|+++|.. +...|..+++.+|+..-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-------------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-------------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE--------------------------
Confidence 46678999999999999987 49999987 48899999999998620
Q ss_pred hhcCceEEEecCHHHHHHHHHHHHhC-----CCEEEEEcCCc-cCHHHHHhCC
Q 047874 633 KIESIRVMARSSPLDKLLMVQSLKQK-----GHVVAVTGDGT-NDAPALRAAD 679 (941)
Q Consensus 633 ~~~~~~v~~~~~p~~K~~iv~~l~~~-----g~~v~~iGDg~-ND~~~l~~A~ 679 (941)
.+..-.|.-..++.+.++.+ .+.+++|||-. .|+-|=...|
T Consensus 111 ------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 111 ------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred ------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 12334786667888888765 67899999963 4665544443
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.65 E-value=0.16 Score=52.72 Aligned_cols=96 Identities=16% Similarity=0.150 Sum_probs=64.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.++++.| ++++.++|+.....+...-+..|+...- ...++++.+... .+-
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-----~~~v~~~~~~~~----------------~KP 143 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-----PDKLFSGYDIQR----------------WKP 143 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-----cceEeeHHhcCC----------------CCC
Confidence 4568999999998 4899999999988888888888886420 012233322110 111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEE
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS 683 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 683 (941)
.|+-=....+.+.-..+.+++|||+.+|..+=++||+.+.
T Consensus 144 ~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 144 DPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 2333334444444345679999999999999999998764
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.48 E-value=0.8 Score=45.26 Aligned_cols=52 Identities=27% Similarity=0.382 Sum_probs=43.0
Q ss_pred EEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHH---HcCCCC
Q 047874 554 TLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAI---ECGILN 605 (941)
Q Consensus 554 ~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~---~~gi~~ 605 (941)
.+-|.+.++|..-|++.++++.|++++.+|..+|....+.-..+.+ ++|+.-
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 3569999999999999999999999999999999877766655554 456653
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.38 Score=52.84 Aligned_cols=49 Identities=18% Similarity=0.258 Sum_probs=40.7
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHH---HHcCCCC
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIA---IECGILN 605 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia---~~~gi~~ 605 (941)
|++.-.+.+-+++.++|+.|+++|++++++|++...+...++ +++|+..
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 666666778899999999999999999999999977776666 5677753
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=92.12 E-value=0.36 Score=53.25 Aligned_cols=95 Identities=5% Similarity=0.034 Sum_probs=67.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH----cCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIE----CGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRV 639 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 639 (941)
++.+++.++++.|+++|++..++|.-+...+..+.+. +|+...- ..+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f---------------------------~~~~~ 83 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF---------------------------DARSI 83 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe---------------------------eEEEE
Confidence 3568999999999999999999999999999999888 7665310 00001
Q ss_pred EEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEec
Q 047874 640 MARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMG 685 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~ 685 (941)
.....|+.=.++.+.+.-..+.++++||...|..+.+.+...+.+-
T Consensus 84 ~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 84 NWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred ecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 1112233333344444333578999999999999999988876554
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.64 E-value=0.32 Score=49.58 Aligned_cols=97 Identities=15% Similarity=0.108 Sum_probs=59.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH-cCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIE-CGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
++.|++.++++.|+++|+++.++|.-+.......... .++... ...++...+.. ...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~------fd~v~~s~~~~----------------~~K 141 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA------ADHIYLSQDLG----------------MRK 141 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh------cCEEEEecccC----------------CCC
Confidence 3689999999999999999999999876654433222 233210 01111111100 001
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccE
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGL 682 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 682 (941)
-+|+-=..+++.+.-..+.++++||...|+.+-++||+-.
T Consensus 142 P~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 142 PEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 1233223444444444678999999999999999999853
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.51 E-value=0.2 Score=49.94 Aligned_cols=108 Identities=20% Similarity=0.298 Sum_probs=68.0
Q ss_pred CCCcchHHHHHHHHhcCC-eEEEEcCCCHHHHHHHHHHcCCCCC-------CCCCC-cccceecchhcccCCHHHHHHhh
Q 047874 564 PCRPGVRAAVESCRNAGV-NVKMVTGDNVHTARAIAIECGILNP-------DVDLN-KDEAVIEGVQFRSLSAEERIAKI 634 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi-~v~i~TGd~~~~a~~ia~~~gi~~~-------~~~~~-~~~~~~~g~~~~~~~~~~~~~~~ 634 (941)
|+-|+..++|+.+++.|- .++++|--|..-...+-+..|+..- ....+ .....+....
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH------------- 150 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYH------------- 150 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCC-------------
Confidence 567999999999999997 9999999999888888888887531 00000 0000000000
Q ss_pred cCceEEEecCH-HHHHHHHHHHHhC-------CCEEEEEcCCccC-HHHHHhCCccEEec
Q 047874 635 ESIRVMARSSP-LDKLLMVQSLKQK-------GHVVAVTGDGTND-APALRAADIGLSMG 685 (941)
Q Consensus 635 ~~~~v~~~~~p-~~K~~iv~~l~~~-------g~~v~~iGDg~ND-~~~l~~A~vgIam~ 685 (941)
.-.-+.+|-+ .=|..++..++.. -+.+.++|||.|| +|+++...--+||-
T Consensus 151 -~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 151 -TQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred -CCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 0001222222 2366666655533 2389999999999 57877766666765
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.18 E-value=2.1 Score=47.24 Aligned_cols=62 Identities=18% Similarity=0.264 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhC-C------CEEEEEcCCccCHHHHHhC-----CccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 647 DKLLMVQSLKQK-G------HVVAVTGDGTNDAPALRAA-----DIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 647 ~K~~iv~~l~~~-g------~~v~~iGDg~ND~~~l~~A-----~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
+|...++.+.+. + ..++++||...|-.||+.. |+||-+| .+.. .-.|++.+. +.+.+.+.++
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~~k--~T~A~y~L~--dp~eV~~~L~ 342 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KYAK--ETNASYSLQ--EPDEVMEFLE 342 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cCCC--CCcceEeCC--CHHHHHHHHH
Confidence 888888887654 1 2489999999999998853 6777776 2211 125888887 5666666654
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=91.15 E-value=0.24 Score=51.52 Aligned_cols=88 Identities=22% Similarity=0.261 Sum_probs=56.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHH---HHHHHHHHcCCCCCCCCCCcccceecchhc-ccCCHHHHHHhhcCceE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVH---TARAIAIECGILNPDVDLNKDEAVIEGVQF-RSLSAEERIAKIESIRV 639 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~v 639 (941)
+.-|++.+.++.+++.|++|+++|||+.. .+..-.++.|.... +..++.+..- ..
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~------~~l~lr~~~~~~~--------------- 173 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW------DHLILRPDKDPSK--------------- 173 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB------SCGEEEEESSTSS---------------
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc------chhcccccccccc---------------
Confidence 34578999999999999999999999765 33444566676541 1222222110 00
Q ss_pred EEecCHHHHHHHHHHHHhCCC-EEEEEcCCccCHHH
Q 047874 640 MARSSPLDKLLMVQSLKQKGH-VVAVTGDGTNDAPA 674 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~~~g~-~v~~iGDg~ND~~~ 674 (941)
....+-|..--+.+.+.|+ .++.+||..+|..-
T Consensus 174 --~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 174 --KSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp --------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred --ccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 0012347777888888865 56779999999764
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=90.26 E-value=0.7 Score=46.93 Aligned_cols=95 Identities=13% Similarity=0.077 Sum_probs=55.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.+++++|++.+ +.+++|..+.......-+.+|+...... ..+.+ +.++.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~--~f~~i----------------------~~~~~ 128 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPG--AFSEV----------------------LMCGH 128 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCC--cccEE----------------------EEecc
Confidence 35789999999999985 5677777655554445566666421000 00111 11222
Q ss_pred CHHHHHHHHH-HHHhCC-CEEEEEcCCccCHHHHHhC--Ccc-EEe
Q 047874 644 SPLDKLLMVQ-SLKQKG-HVVAVTGDGTNDAPALRAA--DIG-LSM 684 (941)
Q Consensus 644 ~p~~K~~iv~-~l~~~g-~~v~~iGDg~ND~~~l~~A--~vg-Iam 684 (941)
.. .|-+++. .+++.| +.+++|||..+|+.+-++| |+- |.+
T Consensus 129 ~~-~kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 129 DE-SKEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred Cc-ccHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEe
Confidence 11 1223322 233333 4688999999999999999 995 344
|
2 hypothetical protein; Provisional |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=90.20 E-value=0.7 Score=46.34 Aligned_cols=98 Identities=12% Similarity=0.034 Sum_probs=64.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+++++|+ .+++++|+.+...+....+.+|+... ...++.+.+...- ...+.-
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~------fd~i~~~~~~~~~------------~~~~KP 142 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC------FDGIFCFDTANPD------------YLLPKP 142 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh------hCeEEEeecccCc------------cCCCCC
Confidence 36789999999998 47999999999999999999998542 1112221111000 000122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccE
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGL 682 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 682 (941)
.|+-=..+++.+....+.+++|||...|+.+=+.||+..
T Consensus 143 ~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 143 SPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred CHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 333334455555555678999999999999999888753
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=90.06 E-value=1.8 Score=50.36 Aligned_cols=100 Identities=12% Similarity=0.011 Sum_probs=63.4
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH-cCCCCC-CCCCCc-ccceecchhcccCCHHHHHHhhcCceEEE
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIE-CGILNP-DVDLNK-DEAVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~-~gi~~~-~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
+++++.+ .++++|.+ +++|+-...-++.+|++ +|++.- ...++. ..-..+|. +-.
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~------------------i~g 168 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGF------------------MKK 168 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeee------------------ecC
Confidence 4555444 44567754 99999999999999987 898731 000110 01122221 111
Q ss_pred --ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecC
Q 047874 642 --RSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGI 686 (941)
Q Consensus 642 --~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~ 686 (941)
.+.-++|.+-++..........+.||+.||.|||+.|+-+.+++.
T Consensus 169 ~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 169 PGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 134467887776433211223789999999999999999999983
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=89.93 E-value=1.6 Score=45.96 Aligned_cols=89 Identities=18% Similarity=0.201 Sum_probs=53.3
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHH---HHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCce
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAI---AIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIR 638 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~i---a~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 638 (941)
+.|.-|++.+..+.+++.|++|+++|||....-... -++.|.... ..+++.+..-.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~------~~LiLR~~~D~--------------- 201 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW------EKLILKDPQDN--------------- 201 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc------ceeeecCCCCC---------------
Confidence 346678999999999999999999999986432222 234576531 11222111000
Q ss_pred EEEecCHHHHHHHHHHHHhCCC-EEEEEcCCccCH
Q 047874 639 VMARSSPLDKLLMVQSLKQKGH-VVAVTGDGTNDA 672 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~~g~-~v~~iGDg~ND~ 672 (941)
-.....+-|...-+.+.+.|+ +++.+||-.+|.
T Consensus 202 -~~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 202 -SAENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred -ccchhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 000011345555555556666 557799999996
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.70 E-value=0.75 Score=46.21 Aligned_cols=90 Identities=19% Similarity=0.162 Sum_probs=61.3
Q ss_pred hHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHH
Q 047874 569 VRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDK 648 (941)
Q Consensus 569 ~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 648 (941)
..+.++.|++. ++..++||.....+....+..|+... ...++.+.+.. ..+-.|+-=
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~------fd~i~~~~~~~----------------~~KP~p~~~ 148 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRY------FDAVVAADDVQ----------------HHKPAPDTF 148 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhH------ceEEEehhhcc----------------CCCCChHHH
Confidence 36889999865 89999999999999999999998642 11222222110 111223333
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc
Q 047874 649 LLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 649 ~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
....+.++-....+++|||..+|+.+-+.||+-
T Consensus 149 ~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 444444544456789999999999999999884
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=89.42 E-value=0.75 Score=42.75 Aligned_cols=31 Identities=13% Similarity=0.153 Sum_probs=28.0
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHH
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHT 593 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~ 593 (941)
+++.+++.+++++++++|++++++|||+...
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 5688899999999999999999999998764
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.27 E-value=0.99 Score=46.83 Aligned_cols=98 Identities=17% Similarity=0.235 Sum_probs=75.6
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
.++.+++.+.++.|++.|+.+.+.|+.....+..+.+.+|+... ...++++.+... .+
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~------f~~~v~~~dv~~----------------~K 142 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDY------FDVIVTADDVAR----------------GK 142 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhh------cchhccHHHHhc----------------CC
Confidence 36789999999999999999999999999999999999999753 223333332211 13
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccE
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGL 682 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 682 (941)
-.|+-=....+.|.-....|+++.|+.|.+.+-++||.-+
T Consensus 143 P~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 143 PAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred CCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 3455556666666556778999999999999999999864
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=86.23 E-value=1.2 Score=46.73 Aligned_cols=62 Identities=23% Similarity=0.288 Sum_probs=31.2
Q ss_pred EecCHHHHHHHHHHHHhCC-------CEEEEEcCCccCHHHHHhC------CccEEecCCCc-HHHHhccCEEeccC
Q 047874 641 ARSSPLDKLLMVQSLKQKG-------HVVAVTGDGTNDAPALRAA------DIGLSMGIQGT-EVAKESSDIVIMDD 703 (941)
Q Consensus 641 ~~~~p~~K~~iv~~l~~~g-------~~v~~iGDg~ND~~~l~~A------~vgIam~~~~~-~~a~~~ad~vl~~~ 703 (941)
.|..-..|...++.+-+.. ..++++||...|-.|++.. +++|-++ ... ....-+|+|-+.+.
T Consensus 159 vrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~-~~~~~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 159 VRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVG-SVSVGEKPTAASYRLDDP 234 (235)
T ss_dssp EE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-------------------
T ss_pred EEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEE-eecccccccccccccccC
Confidence 3444456999998877653 3699999999999998873 5677787 332 23334566666543
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.81 E-value=6.8 Score=41.62 Aligned_cols=45 Identities=20% Similarity=0.336 Sum_probs=38.9
Q ss_pred EEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc
Q 047874 557 GLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIEC 601 (941)
Q Consensus 557 G~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~ 601 (941)
|.+.-.+++=|++.++|+.|+++|++++++|..+..+...+++++
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 788888999999999999999999999999998877777555444
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.57 E-value=2.2 Score=41.12 Aligned_cols=91 Identities=21% Similarity=0.279 Sum_probs=63.0
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHH----HHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEE
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVH----TARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~----~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 640 (941)
+++-+++.|..-++.|=.++.+|||.+. +++.+|+...|.+.+- .+|
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~p-----------------------------v~f 165 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNP-----------------------------VIF 165 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcc-----------------------------eee
Confidence 4566888999999999999999999865 4566777777754321 245
Q ss_pred EecCHH-HHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEec
Q 047874 641 ARSSPL-DKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMG 685 (941)
Q Consensus 641 ~~~~p~-~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~ 685 (941)
+...|. .+..-...+|+++ .-..-||+.||..+-+.|++ ||-+-
T Consensus 166 ~Gdk~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgIRil 211 (237)
T COG3700 166 AGDKPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred ccCCCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCccceeEE
Confidence 544441 2223345566665 44677999999999999987 66543
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=82.73 E-value=2.1 Score=45.62 Aligned_cols=41 Identities=7% Similarity=0.084 Sum_probs=38.5
Q ss_pred CC-cchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 047874 565 CR-PGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILN 605 (941)
Q Consensus 565 ~~-~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~ 605 (941)
+| |++.+++++|+++|+++.++|+.....+...-+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 55 999999999999999999999999999999999999975
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.66 E-value=2.6 Score=44.30 Aligned_cols=92 Identities=12% Similarity=0.044 Sum_probs=54.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++-|++.++++.|++. +++.++|..+.. .+..|+... ...++...+.. ...-
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~------fd~i~~~~~~~----------------~~KP 164 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDY------FEFVLRAGPHG----------------RSKP 164 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHh------hceeEecccCC----------------cCCC
Confidence 4568999999999975 899999986654 255666421 01111111100 0011
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCC-ccCHHHHHhCCccEE
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDG-TNDAPALRAADIGLS 683 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg-~ND~~~l~~A~vgIa 683 (941)
.|+-=....+.+.-..+.+++|||+ ..|+.+=++||+-..
T Consensus 165 ~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 165 FSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred cHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEE
Confidence 1222223333333345679999999 599999999998644
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.13 E-value=7.4 Score=38.59 Aligned_cols=97 Identities=23% Similarity=0.225 Sum_probs=56.6
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCH---HHHHHhh--cCceE
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSA---EERIAKI--ESIRV 639 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~--~~~~v 639 (941)
+.+++.+++..++++|.+++|+|.-+ |+.... .++..+...+. +.+...- -....
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~rgy---------f~~~~f~~~~~~m~~~l~~~gv~id~i~ 91 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGRGY---------FTEADFDKLHNKMLKILASQGVKIDGIL 91 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC-----------CccccC---------ccHHHHHHHHHHHHHHHHHcCCccceEE
Confidence 46899999999999999999999743 222110 01111111110 0000000 00113
Q ss_pred EEecCHH--------HHHHHHHHHHhCC---CEEEEEcCCccCHHHHHhCCcc
Q 047874 640 MARSSPL--------DKLLMVQSLKQKG---HVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 640 ~~~~~p~--------~K~~iv~~l~~~g---~~v~~iGDg~ND~~~l~~A~vg 681 (941)
+|...|+ ....+.+.+++.+ ....+|||...|..+-..|++.
T Consensus 92 ~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 92 YCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 3433343 3455566666654 6789999999999998888886
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=80.06 E-value=1 Score=44.17 Aligned_cols=44 Identities=14% Similarity=-0.045 Sum_probs=38.8
Q ss_pred ccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 047874 561 LKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILN 605 (941)
Q Consensus 561 ~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~ 605 (941)
+.=..||++.+.++.|.+. .++++.|......|..+.+.++...
T Consensus 39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~ 82 (162)
T TIGR02251 39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGG 82 (162)
T ss_pred EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCC
Confidence 3345799999999999988 9999999999999999999998653
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 941 | ||||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 4e-69 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 4e-69 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-68 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 3e-68 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 1e-66 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 1e-65 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 3e-64 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 5e-59 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 2e-32 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 2e-15 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 3e-14 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 2e-13 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 2e-13 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 1e-12 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 1e-12 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 4e-12 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 6e-12 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 2e-11 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 3e-07 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 3e-05 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 3e-05 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 4e-05 |
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 941 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 0.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 0.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-180 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 7e-34 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 4e-33 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 9e-32 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-30 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 3e-11 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-29 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-11 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-29 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 6e-12 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 3e-23 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-10 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 1e-07 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 7e-05 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 671 bits (1734), Expect = 0.0
Identities = 251/1004 (25%), Positives = 417/1004 (41%), Gaps = 128/1004 (12%)
Query: 20 VNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILL 79
+ + G+ + + +G N K V E F+D + ILL
Sbjct: 10 TEECLAYFGVSETTGLTPDQVK--RHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILL 67
Query: 80 VCALLS--LGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDI 137
+ A +S L + + + + I+ + V +AL +
Sbjct: 68 LAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPE- 126
Query: 138 RVEVVRDGRRRGLSI--FDVVVGEVVCLKTGDQIPADG--LFLNGHSLKVDESSMTGESD 193
+V R R+ I D+V G++V + GD++PAD L + +L+VD+S +TGES
Sbjct: 127 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESV 186
Query: 194 RVE------VDEKNPF------LLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNE 241
V D + L SGT + AG +V + G+ST G++ ++ +
Sbjct: 187 SVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQD 246
Query: 242 ETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMN 301
+TPLQ +L++ + K+ + V V + + + +
Sbjct: 247 KTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIR--------------- 291
Query: 302 SVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICT 361
I AV + V AIPEGLP +T LA +RM K +A+VR L + ET+G + IC+
Sbjct: 292 GAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICS 351
Query: 362 DKTGTLTLNQMKVTEFWLGKEAMKSDACSLELA------------------------QNL 397
DKTGTLT NQM V + ++ + E + L
Sbjct: 352 DKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGL 411
Query: 398 YELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINV 457
EL L ++ + + E G TE A+ + + + E + V
Sbjct: 412 VELATICA-LCNDSSLDFNETKGVYEKVGEATETALTTLVE-KMNVFNTEVRNLSKVERA 469
Query: 458 EA----------------FNSEKKRSGVLMKRINEKVFHTHW----KGAAEMILVMCSHY 497
A F+ ++K V KGA E ++ C++
Sbjct: 470 NACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYV 529
Query: 498 YVKSGTIRILDGEERTQIEKIIQE--MAAKSLRCIAFA------HTKAAEADGQVQEKLE 549
V T + G + +I +I+E +LRC+A A + D +
Sbjct: 530 RV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEY 588
Query: 550 ETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVD 609
ET LT +G+VG+ DP R V +++ CR+AG+ V M+TGDN TA AI GI + +
Sbjct: 589 ETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEE 648
Query: 610 LNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGT 669
+ + G +F L E+ AR P K +V+ L+ + A+TGDG
Sbjct: 649 V--ADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGV 706
Query: 670 NDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQ 729
NDAPAL+ A+IG++MG GT VAK +S++V+ DDNFS++V + GR +YNN+++F+++
Sbjct: 707 NDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYL 765
Query: 730 LTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGR 789
++ NV +V F A L VQLLWVNL+ D L A AL P D+M +PP
Sbjct: 766 ISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSP 825
Query: 790 SKPLITKIMWRNLISQAIYQVAILLTL-------------------------QFKGRSIL 824
+PLI+ ++ ++ Y A +
Sbjct: 826 KEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFE 885
Query: 825 GVKESVKD-----TMIFNTFVLCQIFNEFNARKLEKKNIFK-GIHKNKLFLAIIGITIAL 878
G+ + + TM + V ++ N N+ E +++ + N L I ++++L
Sbjct: 886 GLDCEIFEAPEPMTMALSVLVTIEMCNALNSLS-ENQSLMRMPPWVNIWLLGSICLSMSL 944
Query: 879 QL--VMVEFLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCI 920
+ V+ L + L+ QW + I+ + ++K I
Sbjct: 945 HFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFI 988
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 661 bits (1707), Expect = 0.0
Identities = 243/997 (24%), Positives = 405/997 (40%), Gaps = 132/997 (13%)
Query: 20 VNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILL 79
++++ + D G+ + A + G N PP I+L
Sbjct: 53 LDELHNKYGTDLTRGLTNARAK--EILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLW 110
Query: 80 VCALLSLGFGIKQVGLKEG-----WFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANES 134
+ A+L Q ++ + G + V + S K SR + N
Sbjct: 111 IGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMV 170
Query: 135 SDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESD- 193
+ V+RDG + ++ VV G++V +K GD+IPAD ++ H KVD SS+TGES+
Sbjct: 171 PQ-QALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLTGESEP 229
Query: 194 ---RVEVDEKNPF-----LLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPL 245
E +NP T G +V G T G + + S TP+
Sbjct: 230 QTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTPI 289
Query: 246 QARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVIN 305
+ I + + + V + LI G S +
Sbjct: 290 AIEIEHFIHIITGVAVFLGVSFFILSLIL--------GY-----------------SWLE 324
Query: 306 IIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTG 365
+ + IIV +PEGL VT+ L + KRM + + +V+ L A ET+GS +TIC+DKTG
Sbjct: 325 AVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTG 384
Query: 366 TLTLNQMKVTEFWLGKEAMKSDAC------SLELAQNLYELLQEAVGL-NTTGNVYNSNS 418
TLT N+M V W + ++D + + + L L N ++
Sbjct: 385 TLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDN 444
Query: 419 LSTSE--ITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRIN- 475
+ + + G +E A+L +V + I FNS K + +
Sbjct: 445 VPILKRSVAGDASESALLKCIE-LCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKS 503
Query: 476 ---EKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAF 532
+ KGA E IL CS + +G L + + + E+ R + F
Sbjct: 504 SESRYLLVM--KGAPERILDRCSTILL-NGAEEPLKEDMKEAFQNAYLELGGLGERVLGF 560
Query: 533 AH---TKAAEADGQVQEKLE----ETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKM 585
H + +G + E T L +GL+ + DP R V AV CR+AG+ V M
Sbjct: 561 CHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIM 620
Query: 586 VTGDNVHTARAIAIECGILNPDVDLNKDEA------------------VIEGVQFRSLSA 627
VTGD+ TA+AIA GI++ + +D A V+ G + LS
Sbjct: 621 VTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLST 680
Query: 628 EE--RIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMG 685
E I + V AR+SP KL++V+ +++G +VAVTGDG ND+PAL+ ADIG++MG
Sbjct: 681 EVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMG 740
Query: 686 IQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAV 745
I G++V+K+++D++++DDNF+S+VT + GR +++N++K + + LT N+ + +
Sbjct: 741 ISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFII 800
Query: 746 SSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQ 805
+ +PL V +L ++L D + A++LA EQ +D+M + P + LIS
Sbjct: 801 GNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVN---ERLISM 857
Query: 806 AIYQVAILLTL----------------------------------------QFKGRSILG 825
A Q+ ++ L Q
Sbjct: 858 AYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRK 917
Query: 826 VKESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQL--VMV 883
+ E T F + V+ Q + + + +IF+ KNK+ + + AL
Sbjct: 918 IVEFTCHTSFFISIVVVQWADLIICK-TRRNSIFQQGMKNKILIFGLFEETALAAFLSYC 976
Query: 884 EFLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCI 920
L W + + + + + I
Sbjct: 977 PGTDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFI 1013
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 660 bits (1706), Expect = 0.0
Identities = 229/994 (23%), Positives = 399/994 (40%), Gaps = 125/994 (12%)
Query: 20 VNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILL 79
V ++ G+ S A + G N + P ++
Sbjct: 58 VAELEQKYQTSATKGLSASLAA--ELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMW 115
Query: 80 VCALLSLGFGIKQVGLKEG-----WFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANES 134
V A + L Q + + ++I V + FK + + N
Sbjct: 116 VAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLV 175
Query: 135 SDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESD- 193
+ V+RDG + ++ +VVG++V +K GD++PAD L KVD SS+TGES+
Sbjct: 176 PQ-QATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEP 234
Query: 194 ---RVEVDEKNPF-----LLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPL 245
E ++P T G LV + G T G + S S NE+TP+
Sbjct: 235 QTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPI 294
Query: 246 QARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVIN 305
+ I + + V + G + +
Sbjct: 295 AIEIEHFVDIIAGLAILFGATFFIVAMCI--------GY-----------------TFLR 329
Query: 306 IIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTG 365
+ + I+V +PEGL VT+ L+ + KR+ + +V+ L A ET+GS + IC+DKTG
Sbjct: 330 AMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTG 389
Query: 366 TLTLNQMKVTEFWLGKEAMKSDAC------SLELAQNLYELLQEAVGL-NTTGNVYNSNS 418
TLT N+M V+ W +D + + + + L + L N ++
Sbjct: 390 TLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDA 449
Query: 419 LSTSE--ITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINE 476
+ + + G +E A+L ++ N ++ + FNS K + + +
Sbjct: 450 VPVPKRIVIGDASETALLKFSE-LTLGNAMGYRERFPKVCEIPFNSTNKFQLSIH-TLED 507
Query: 477 KVFHTHW---KGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFA 533
H KGA E +L CS + G LD + R + + R + F
Sbjct: 508 PRDPRHVLVMKGAPERVLERCSSILI-KGQELPLDEQWREAFQTAYLSLGGLGERVLGFC 566
Query: 534 HTKAAEADGQVQEKLE-------ETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMV 586
+E D + +GL+ GLV + DP R V AV CR AG+ V MV
Sbjct: 567 QLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMV 626
Query: 587 TGDNVHTARAIAIECGILNPDVDLNKDEA------------------VIEGVQFRSLSAE 628
TGD+ TA+AIA GI++ + +D A VI G+Q + +
Sbjct: 627 TGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPS 686
Query: 629 ERIAKIESIR--VMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGI 686
E + + + V AR+SP KL++V+S ++ G +VAVTGDG ND+PAL+ ADIG++MGI
Sbjct: 687 ELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGI 746
Query: 687 QGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVS 746
G++ AK ++D++++DDNF+S+VT + GR +++N++K + + LT N+ L
Sbjct: 747 AGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITV 806
Query: 747 SGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPP--VGRSKPLITKIMWRNLIS 804
S +PL + +L++ L D +++LA E+ +D+M P R + + + +
Sbjct: 807 SVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQ 866
Query: 805 QAIYQVAILLTLQFKGRSILGVKESVKD-------------------------------- 832
Q T F + G +
Sbjct: 867 IGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQY 926
Query: 833 ---TMIFNTFVLCQIFNEFNARKLEKKNIFK-GIHKNKLFLAIIGITIALQL--VMVEFL 886
T+ F + +CQI + + + + F+ G +N++ + I + + +
Sbjct: 927 TCYTVFFISIEMCQIADVLIRK-TRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGM 985
Query: 887 KTFADTERLNWGQWAACIGIAAMSWPIGFLIKCI 920
+ + + W + + + + K
Sbjct: 986 PNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLG 1019
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 560 bits (1444), Expect = 0.0
Identities = 175/910 (19%), Positives = 356/910 (39%), Gaps = 97/910 (10%)
Query: 20 VNQVASILDCDTKGGIRGSEADLGHRINVFGRNR---YKKPPAKRFISFVFEAFKDTTII 76
+ +V L C +G + E + RI +FG N+ K+ +F+ F +
Sbjct: 19 IEEVFQQLKCSREG-LTTQEGE--DRIQIFGPNKLEEKKESKLLKFLGF----MWNPLSW 71
Query: 77 ILLVCALLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSD 136
++ + A++++ + W D II + + ++S + AL +
Sbjct: 72 VMEMAAIMAIALANGDGRPPD-WQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLA- 129
Query: 137 IRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVE 196
+ +V+RDG+ +V G++V +K GD IPAD L G LKVD+S++TGES V
Sbjct: 130 PKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVT 189
Query: 197 VDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWI 256
+ SG+ G +V + G+ T +G+ + N+ Q L + ++
Sbjct: 190 KHPGQ-EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD-STNQVGHFQKVLTAIGNFC 247
Query: 257 GKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVV 316
I +V+ ++++ + I + +++
Sbjct: 248 --ICSIAIGMVIEIIVMYPIQRR----------------------KYRDGIDNLLVLLIG 283
Query: 317 AIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTE 376
IP +P +++T+A R+ + A+ ++++A E M +C+DKTGTLTLN++ V +
Sbjct: 284 GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK 343
Query: 377 FWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSW 436
+ + ++L A +++ + A++
Sbjct: 344 NLVEVFCKGVEKD---------QVLLFAA-------------MASRVENQDAIDAAMVGM 381
Query: 437 AMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSH 496
+ E + ++ FN KR+ + + KGA E IL +
Sbjct: 382 L-----ADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWH-RVSKGAPEQILELAK- 434
Query: 497 YYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLL 556
+ ++ II + A + LR +A A E ++ +
Sbjct: 435 ----------ASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT----KESPGAPWEFV 480
Query: 557 GLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAV 616
GL+ L DP R + N GVNVKM+TGD + + G+ ++ A+
Sbjct: 481 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT---NMYPSSAL 537
Query: 617 IEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALR 676
+ + +L++ IE A P K +V+ L+++ H+V +TGDG NDAPAL+
Sbjct: 538 LGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALK 597
Query: 677 AADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAA 736
ADIG+++ T+ A+ +SDIV+ + S +++ + R ++ ++ + + +++ +
Sbjct: 598 KADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI-R 655
Query: 737 LVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITK 796
+V F + +A +L + ++ D + ++ ++ P + K +
Sbjct: 656 IVFGFMLIALIWEFDFSAFMVLIIAILND-GTIMTISKDRV--KPSPTPDSWKLKEIFAT 712
Query: 797 IMWRNLISQAIYQVAILLTLQFKGRSILGVKESVKD------TMIFNTFVLCQIFNEFNA 850
+ + + + S S++D ++ + F
Sbjct: 713 GVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVT 772
Query: 851 RKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTFADTERLNWGQWAACIGIAAMS 910
R + F L +A + + L+ V FA + WG + ++
Sbjct: 773 R--SRSWSFVERPGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVT 830
Query: 911 WPIGFLIKCI 920
+ + K
Sbjct: 831 YFPLDVFKFA 840
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 544 bits (1405), Expect = e-180
Identities = 175/900 (19%), Positives = 350/900 (38%), Gaps = 106/900 (11%)
Query: 26 ILDCDTKGGIRGSEADLGHRINVFGRNRY---KKPPAKRFISFVFEAFKDTTIIILLVCA 82
+L DT+ G+ E R +G N+ K+ +F+ F F ++ A
Sbjct: 79 MLQTDTRVGLTSEEVV--QRRRKYGLNQMKEEKENHFLKFLGF----FVGPIQFVMEGAA 132
Query: 83 LLSLGFGIKQVGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVV 142
+L+ G W D G I + L V V F+ L + ++ V+
Sbjct: 133 VLAAGLE--------DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLA-LKAVVL 183
Query: 143 RDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHS-LKVDESSMTGESDRVEVDEKN 201
RDG + + +VV G+++ ++ G IPADG + + L+VD+S++TGES V+ + +
Sbjct: 184 RDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGD 243
Query: 202 PFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGL 261
+ + + V G F+++T+ G +T G + ++ LN + + + + +
Sbjct: 244 Q-VFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVI 302
Query: 262 TVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEG 321
++V R N ++ I+ + I ++ +P G
Sbjct: 303 FTLLIVWVSSFYRS-------------------------NPIVQILEFTLAITIIGVPVG 337
Query: 322 LPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGK 381
LP VT T+A + K A+V+KLSA E++ +C+DKTGTLT N++ + + +
Sbjct: 338 LPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVA 397
Query: 382 EAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDL 441
D + A + S + +KA L +
Sbjct: 398 GVDPEDL--MLTA------------------CLAA---SRKKKGIDAIDKAFL--KSLKY 432
Query: 442 GMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKS 501
V+ F+ K+ +++ + KGA +L
Sbjct: 433 YPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCV-KGAPLFVLKTVEE----- 486
Query: 502 GTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGL 561
+ E + + E A + R + A + E +LG++
Sbjct: 487 --DHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR------------GEGSWEILGIMPC 532
Query: 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQ 621
DP R V + G+++KM+TGD V AR + + G+ + +
Sbjct: 533 MDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIY----NAERLGLGG 588
Query: 622 FRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG 681
+ E +E+ A P K +V+ L+Q+G++VA+TGDG NDAP+L+ AD G
Sbjct: 589 GGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTG 648
Query: 682 LSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINF 741
+++ ++ A+ ++DIV + +++ L+ R +++ + ++ +++ +++ L I
Sbjct: 649 IAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSI-HLEIFL 706
Query: 742 GAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIM-WR 800
G ++ L ++++ + D + LA+A + N S+ PV + P + +
Sbjct: 707 GLWIAILNRSLNIELVVFIAIFAD-VATLAIAYD---NAPYSQTPVKWNLPKLWGMSVLL 762
Query: 801 NLISQAIYQVAILLTLQFKGRSILGVKESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFK 860
++ + + + D ++F L + + F R +
Sbjct: 763 GVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITR--ANGPFWS 820
Query: 861 GIHKNKLFLAIIGITIALQLVMVEFLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCI 920
I +L AI + I L + + + + + + I + I
Sbjct: 821 SIPSWQLSGAIFLVDI---LATCFTIWGWFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYI 877
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 7e-34
Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 34/168 (20%)
Query: 555 LLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDE 614
+ + D RP ++ +E +N G+ + +++GD + ++ E I E
Sbjct: 127 PIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI---------QE 177
Query: 615 AVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPA 674
+ SP DK+ +++ LKQ G+ V + GDG NDA A
Sbjct: 178 ------------------------YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAA 213
Query: 675 LRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNI 722
L AD+ ++MG G +++K +DI+++ ++ +++ +++ + + N I
Sbjct: 214 LALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAI 260
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 4e-33
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 44/186 (23%)
Query: 546 EKLEETGLT---------LLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARA 596
EKL++ G T + G++ L D RP R A+ + G+ M+TGDN A+
Sbjct: 117 EKLKQQGKTVVFILKNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKW 176
Query: 597 IAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLK 656
+A E G+ D+ A P +K V+ +
Sbjct: 177 VAEELGL---------DD------------------------YFAEVLPHEKAEKVKEV- 202
Query: 657 QKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGR 716
Q+ +V A+ GDG NDAPAL AD+G+++G GT+VA E++DIV++ ++ V ++ R
Sbjct: 203 QQKYVTAMVGDGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSR 261
Query: 717 CVYNNI 722
Y+
Sbjct: 262 KTYSKF 267
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 124 bits (315), Expect = 9e-32
Identities = 57/186 (30%), Positives = 84/186 (45%), Gaps = 44/186 (23%)
Query: 546 EKLEETGLT---------LLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARA 596
EKLE T + G++ + D + + AV+ + G+ V M+TGDN +A A
Sbjct: 136 EKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEA 195
Query: 597 IAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLK 656
I+ E + D V+A P K V+ L
Sbjct: 196 ISRELNL---------DL------------------------VIAEVLPHQKSEEVKKL- 221
Query: 657 QKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGR 716
Q VVA GDG NDAPAL AD+G+++G G++VA ES DIV++ D+ VV ++ R
Sbjct: 222 QAKEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSR 280
Query: 717 CVYNNI 722
+ I
Sbjct: 281 KTMSKI 286
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 1e-30
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 43/186 (23%)
Query: 546 EKLEETGLT---------LLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARA 596
++L G + + L+ ++DP + + + +G+ + M+TGD+ TA A
Sbjct: 527 DELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEA 586
Query: 597 IAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLK 656
+A GI + V+A P DK +V LK
Sbjct: 587 VAGTLGI---------KK------------------------VVAEIMPEDKSRIVSELK 613
Query: 657 QKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGR 716
KG +VA+ GDG NDAPAL ADIG++MG GT+VA ES+ + ++ + + R
Sbjct: 614 DKGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSE 672
Query: 717 CVYNNI 722
+NI
Sbjct: 673 STMSNI 678
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 66.4 bits (163), Expect = 3e-11
Identities = 62/265 (23%), Positives = 103/265 (38%), Gaps = 81/265 (30%)
Query: 141 VVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEK 200
+ DG +S+ +V VG+++ ++ G++IP DG G S VDES +TGE V K
Sbjct: 230 IKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF-VDESMVTGEPIPV---AK 285
Query: 201 NPFLLSGTKVTAG----YGF--MLVTSVGMSTAWGEMMSSISHELNE----ETPLQARLN 250
KV G M VG T M++ I +++ P+Q +
Sbjct: 286 EA----SAKVIGATINQTGSFVMKALHVGSDT----MLARIVQMVSDAQRSRAPIQRLAD 337
Query: 251 KLTSWIGKIGLTVAVLVLAVM--LIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIA 308
++ W AV+++AV+ ++ G ++ +
Sbjct: 338 TVSGW-----FVPAVILVAVLSFIVWALLGPQ--------------------PALSYGLI 372
Query: 309 AAVTIIVVAIP--EGL--PLAVTLTLAFSMKRMMKDHAMV------------RKLSACET 352
AAV+++++A P GL P+++ MV + A E
Sbjct: 373 AAVSVLIIACPCALGLATPMSI----------------MVGVGKGAQSGVLIKNAEALER 416
Query: 353 MGSATTICTDKTGTLTLNQMKVTEF 377
M T+ DKTGTLT K+T
Sbjct: 417 MEKVNTLVVDKTGTLTEGHPKLTRI 441
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 2e-29
Identities = 57/186 (30%), Positives = 84/186 (45%), Gaps = 44/186 (23%)
Query: 546 EKLEETGLT---------LLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARA 596
EKLE T + G++ + D + + AV+ + G+ V M+TGDN +A A
Sbjct: 430 EKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEA 489
Query: 597 IAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLK 656
I+ E + D V+A P K V+ L
Sbjct: 490 ISRELNL---------DL------------------------VIAEVLPHQKSEEVKKL- 515
Query: 657 QKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGR 716
Q VVA GDG NDAPAL AD+G+++G G++VA ES DIV++ D+ VV ++ R
Sbjct: 516 QAKEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSR 574
Query: 717 CVYNNI 722
+ I
Sbjct: 575 KTMSKI 580
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 2e-11
Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 48/248 (19%)
Query: 141 VVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEK 200
V+RDG+ + + +V VG++V ++ G++IP DG+ + G S VDES ++GE V K
Sbjct: 137 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPV---LK 192
Query: 201 NPFLLSGTKVTAG----YGF--MLVTSVGMSTAWGEMMSSISHELNEE-----TPLQARL 249
+ G +V G + T VG T +++ I L E+ P+Q
Sbjct: 193 SK----GDEVFGATINNTGVLKIRATRVGGET----LLAQIVK-LVEDAMGSKPPIQRLA 243
Query: 250 NKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAA 309
+K+ ++ L VA+ F+ ++
Sbjct: 244 DKVVAYFIPTVLLVAISAFIYWY----------------FIAH--------APLLFAFTT 279
Query: 310 AVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTL 369
+ ++VVA P LA L M + + +++ A E T + DKTGTLT
Sbjct: 280 LIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTK 339
Query: 370 NQMKVTEF 377
+ +VT+
Sbjct: 340 GKPEVTDL 347
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 124 bits (315), Expect = 2e-29
Identities = 57/186 (30%), Positives = 84/186 (45%), Gaps = 44/186 (23%)
Query: 546 EKLEETGLT---------LLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARA 596
EKLE T + G++ + D + + AV+ + G+ V M+TGDN +A A
Sbjct: 508 EKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEA 567
Query: 597 IAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLK 656
I+ E + D V+A P K V+ L
Sbjct: 568 ISRELNL---------DL------------------------VIAEVLPHQKSEEVKKL- 593
Query: 657 QKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGR 716
Q VVA GDG NDAPAL AD+G+++G G++VA ES DIV++ D+ VV ++ R
Sbjct: 594 QAKEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSR 652
Query: 717 CVYNNI 722
+ I
Sbjct: 653 KTMSKI 658
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 6e-12
Identities = 61/264 (23%), Positives = 102/264 (38%), Gaps = 80/264 (30%)
Query: 141 VVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEK 200
V+RDG+ + + +V VG++V ++ G++IP DG+ + G S VDES ++GE V K
Sbjct: 215 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDESMISGEPVPV---LK 270
Query: 201 NPFLLSGTKVTAG----YGFMLV--TSVGMSTAWGEMMSSISHELNEE-----TPLQARL 249
+ G +V G + + T VG T +++ I L E+ P+Q
Sbjct: 271 SK----GDEVFGATINNTGVLKIRATRVGGET----LLAQIVK-LVEDAMGSKPPIQRLA 321
Query: 250 NKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAA 309
+K+ ++ L VA+ F+ ++
Sbjct: 322 DKVVAYFIPTVLLVAISAFIYWY----------------FIAH--------APLLFAFTT 357
Query: 310 AVTIIVVAIP--EGL--PLAVTLTLAFSMKRMMKDHAMV------------RKLSACETM 353
+ ++VVA P GL P A+ V + A E
Sbjct: 358 LIAVLVVACPCAFGLATPTAL----------------TVGMGKGAELGILIKNADALEVA 401
Query: 354 GSATTICTDKTGTLTLNQMKVTEF 377
T + DKTGTLT + +VT+
Sbjct: 402 EKVTAVIFDKTGTLTKGKPEVTDL 425
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 96.5 bits (241), Expect = 3e-23
Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 9/149 (6%)
Query: 417 NSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINE 476
NS + + + + A+L + I+ F+ E++R V++ E
Sbjct: 25 NSHYQTGL-KNLLDTAVLEGTD---EESARSLASRWQKIDEIPFDFERRRMSVVVAENTE 80
Query: 477 KVF-HTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHT 535
KGA + IL +CS G I LD +I+++ + + LR +A A T
Sbjct: 81 HHQLVC--KGALQEILNVCSQVRHN-GEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVA-T 136
Query: 536 KAAEADGQVQEKLEETGLTLLGLVGLKDP 564
K A ++ +E+ L L G + D
Sbjct: 137 KYLPAREGDYQRADESDLILEGYIAFLDH 165
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 66.0 bits (160), Expect = 4e-11
Identities = 52/357 (14%), Positives = 102/357 (28%), Gaps = 104/357 (29%)
Query: 607 DVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTG 666
+ D + + + + LS EE I I I S +L KQ+ V
Sbjct: 32 NFDCKDVQDMPKSI----LSKEE-IDHI--IMSKDAVSGTLRLFWTLLSKQEEMVQKFVE 84
Query: 667 DGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFL 726
+ + M + + E +M + L YN+ Q F
Sbjct: 85 EVLRI-------NYKFLM----SPIKTEQRQPSMMTRMYIEQRDRL------YNDNQVFA 127
Query: 727 QFQLT--------------VNVAALVINFGAAVSSGKVPLTA-------VQLL------W 759
++ ++ + A V+ G SGK + VQ W
Sbjct: 128 KYNVSRLQPYLKLRQALLELRPAKNVLIDGVL-GSGKTWVALDVCLSYKVQCKMDFKIFW 186
Query: 760 VNL--------IMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVA 811
+NL +++ L L + + + + R L+ Y+
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246
Query: 812 ILLTLQFKGRSILGVKESVKDTMIFNTFVL-CQI------------FNEFNARKLEKKNI 858
+L +L +V++ +N F L C+I + + +
Sbjct: 247 LL---------VL---LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH 294
Query: 859 FKGIHKNK---LFLAIIGITIA-----------LQLVMV-EFLKTFADTERLNWGQW 900
+ ++ L L + +L ++ E ++ T W W
Sbjct: 295 SMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT----WDNW 347
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 65.3 bits (158), Expect = 8e-11
Identities = 73/564 (12%), Positives = 152/564 (26%), Gaps = 170/564 (30%)
Query: 419 LSTSE---ITGSPTEKA---ILSWAMIDLGMNVDEPKQYCTVINVEAF--NSEKKRSGVL 470
LS E I S + L W ++ + V+ F + L
Sbjct: 46 LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM-----------VQKFVEEVLRINYKFL 94
Query: 471 MKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQ-EMAAKSLRC 529
M I T + + M + ++ ++++ ++ A LR
Sbjct: 95 MSPI-----KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR- 148
Query: 530 IAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPG--VRAAVESCRNAGVNVKM-- 585
+ + G++G G A + C + V KM
Sbjct: 149 -------------------PAKNVLIDGVLG----S--GKTWVAL-DVCLSYKVQCKMDF 182
Query: 586 ----VTGDNVHTARAIAIE-----CGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIES 636
+ N ++ + +E ++P+ D + ++ R S + + ++
Sbjct: 183 KIFWLNLKNCNSPETV-LEMLQKLLYQIDPNWTSRSDHS--SNIKLRIHSIQAELRRLLK 239
Query: 637 IRVMARSSPLDKLLMVQSLKQKGHVVA---------VTGDG--TNDAPALRAADIGLSMG 685
+ LL++ +++ A T T+ A I L
Sbjct: 240 SKPYENC-----LLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH 294
Query: 686 IQG-TEVAKESSDIVIMDDNFSSVVTV----------------------------LRWGR 716
T E + + W
Sbjct: 295 SMTLTP--DEVKSL------LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN 346
Query: 717 CVYNNIQKFLQ-FQLTVNV----------AALVINFGAAVSSGKVPLTAVQLLWVNLIMD 765
+ N K + ++NV L + F + +P + L+W ++I
Sbjct: 347 WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV-FPPSA---HIPTILLSLIWFDVIKS 402
Query: 766 TLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQFKG----- 820
N L S L+ K + +I + + L ++ +
Sbjct: 403 D-------VMVVVNKLHKY-----S--LVEK--QPKESTISIPSIYLELKVKLENEYALH 446
Query: 821 RSILGVKESVKDTMIFNTFVLCQIFNEF---------NARKLEKKNIFKGIHKNKLFLA- 870
RSI+ ++ T + + + F N E+ +F+ + + FL
Sbjct: 447 RSIVD-HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQ 505
Query: 871 -IIGITIALQLVMVEFLKTFADTE 893
I + A L T +
Sbjct: 506 KIRHDSTAWNASG-SILNTLQQLK 528
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 1e-04
Identities = 50/355 (14%), Positives = 103/355 (29%), Gaps = 113/355 (31%)
Query: 353 M-GS-----ATTICTDKTGTLTLNQMKVTEFWL--GKEAMKSDACSLELAQNLYELLQEA 404
+ GS A +C K+ FWL S LE+ Q L +
Sbjct: 158 VLGSGKTWVALDVCLSY-KVQCKMDFKI--FWLNLKNC--NSPETVLEMLQKLLYQI--- 209
Query: 405 VGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQY--CTVI--NV--- 457
N + + S++ + +A L + K Y C ++ NV
Sbjct: 210 -----DPNWTSRSDHSSNIKLRIHSIQAELRRLLKS--------KPYENCLLVLLNVQNA 256
Query: 458 ---EAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMC-SHYYVKSGTIRILDGEERT 513
AFN K +L+ T +K + + +H + ++ + E ++
Sbjct: 257 KAWNAFNLSCK---ILLT--------TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305
Query: 514 QIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVG--LKD-PCRPGVR 570
+ K + + + L E T L ++ ++D
Sbjct: 306 LLLKYL-DCRPQDLP---------REVLT--------TNPRRLSIIAESIRDGLATWD-- 345
Query: 571 AAVESCRNAGVNVKMVTGDNVHTARAIAIE-------------CGILNPDVDL------- 610
N K V D + T ++ + P +
Sbjct: 346 -----------NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSL 394
Query: 611 ---NKDEAVIEGV--QFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGH 660
+ ++ + V + S E+ K +I + + L+ + +++ H
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY--LELKVKLENEYAL-H 446
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 57.9 bits (141), Expect = 2e-10
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 141 VVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEK 200
V+RDG+ + + +V VG++V ++ G++IP DG+ + G S VDES ++GE V K
Sbjct: 16 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDESMISGEPVPV---LK 71
Query: 201 NPFLLSGTKVTAG----YGFMLV--TSVGMSTA 227
+ G +V G + + T VG T
Sbjct: 72 SK----GDEVFGATINNTGVLKIRATRVGGETL 100
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 1e-07
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 20/99 (20%)
Query: 141 VVRDGRRRGLS------IFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDR 194
+V L + V G+++ + G + P DG + GHS VDES +TGE+
Sbjct: 22 IVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMP 80
Query: 195 VEVDEKNPFLLSGTKVTAG----YGFMLV--TSVGMSTA 227
V K P G+ V AG G +L+ T VG T
Sbjct: 81 V---AKKP----GSTVIAGSINQNGSLLICATHVGADTT 112
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 7e-05
Identities = 14/122 (11%), Positives = 32/122 (26%), Gaps = 17/122 (13%)
Query: 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNP----DVDLNKDEAVIEG 619
R G R V + +++G + + + D I+
Sbjct: 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 136
Query: 620 VQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAAD 679
+ + K ++ L + + + GD D A + +D
Sbjct: 137 PHSCKGTCSNQCG-------------CCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSD 183
Query: 680 IG 681
+
Sbjct: 184 LC 185
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 941 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.92 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.93 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.91 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.9 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.9 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.77 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.75 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.41 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.3 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.28 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.25 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.18 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.17 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.16 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.16 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.15 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.15 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.11 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.11 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.1 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.1 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.05 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.05 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.05 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.98 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.94 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.93 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.89 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.86 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.85 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.84 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.82 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.79 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.79 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.78 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.77 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.76 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.73 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.73 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.72 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.71 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.7 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.7 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.63 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.6 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.53 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.53 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.53 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.49 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.44 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.39 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.38 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.37 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.37 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.35 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.32 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.32 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.29 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.28 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.25 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.21 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.21 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.2 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.15 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.14 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.14 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.14 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.12 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.11 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.1 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.09 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.08 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.07 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.07 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.07 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.06 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.03 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.01 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.0 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.98 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.96 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.96 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.95 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.93 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.93 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.92 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.88 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.86 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.84 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.82 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.8 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.8 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.8 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.78 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.77 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.77 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.73 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.73 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.73 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.72 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.68 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.67 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.66 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.6 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.6 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.57 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.51 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.46 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.41 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.39 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.36 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.34 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.14 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.12 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.02 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.98 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.92 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.89 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.88 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.84 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.83 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.82 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.8 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.71 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.7 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.64 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.6 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.31 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 95.92 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.88 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 95.85 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.84 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.82 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.62 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 95.55 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 95.15 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 95.01 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 94.97 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 93.31 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 93.14 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 91.83 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 91.44 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 91.31 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 90.33 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 89.22 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 87.55 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 85.03 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 81.13 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 80.89 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-130 Score=1228.41 Aligned_cols=876 Identities=25% Similarity=0.373 Sum_probs=748.7
Q ss_pred hCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccc----
Q 047874 17 LGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQ---- 92 (941)
Q Consensus 17 ~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~---- 92 (941)
-.+++|+++.|++|+++|||++| +++|+++||+|++++++.+++|+.+++||+++++++++++++++++.+...
T Consensus 55 ~~~~~~~~~~l~~~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~ 132 (1034)
T 3ixz_A 55 QLSVAELEQKYQTSATKGLSASL--AAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEG 132 (1034)
T ss_pred hCCHHHHHHHhCCCcccCCCHHH--HHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhccC
Confidence 45899999999999999999988 999999999999999888899999999999999999999999987654211
Q ss_pred -cCCcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeec
Q 047874 93 -VGLKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPA 171 (941)
Q Consensus 93 -~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPa 171 (941)
......|++++.++++++++.+++.++++++++..+++.++ .+.+++|+|||++++|+++||||||+|.|++||+|||
T Consensus 133 ~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l-~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPA 211 (1034)
T 3ixz_A 133 DLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNL-VPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPA 211 (1034)
T ss_pred CCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecC
Confidence 11122466777777777888889999999999999999865 4568999999999999999999999999999999999
Q ss_pred ceEEEecceEEEeeccCCCCCCceecCC---------CCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCC
Q 047874 172 DGLFLNGHSLKVDESSMTGESDRVEVDE---------KNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEE 242 (941)
Q Consensus 172 D~~ll~g~~l~Vdes~LTGEs~pv~k~~---------~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 242 (941)
||+|++|+++.||||+|||||.|+.|.+ ..|++|+||.+.+|.+.++|++||.+|++||+.+++...+.++
T Consensus 212 D~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~ 291 (1034)
T 3ixz_A 212 DIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEK 291 (1034)
T ss_pred CeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccCC
Confidence 9999999988999999999999999974 2467999999999999999999999999999999998888899
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCch
Q 047874 243 TPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGL 322 (941)
Q Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L 322 (941)
+|+++.++++..++..+++.++++++++++. .+. ++...+..++++++++|||+|
T Consensus 292 tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~----------------------~~~~~~~~~i~l~v~~iPe~L 346 (1034)
T 3ixz_A 292 TPIAIEIEHFVDIIAGLAILFGATFFIVAMC---IGY----------------------TFLRAMVFFMAIVVAYVPEGL 346 (1034)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcc----------------------hHHHHHHHHHHHHHheecccc
Confidence 9999999999999888887777766655432 221 566788899999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccch------hhhhHH
Q 047874 323 PLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACS------LELAQN 396 (941)
Q Consensus 323 ~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~------~~~~~~ 396 (941)
|++++++++.++.+|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+..+... ......
T Consensus 347 p~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (1034)
T 3ixz_A 347 LATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSE 426 (1034)
T ss_pred HHHHHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCH
Confidence 99999999999999999999999999999999999999999999999999999999877654322110 011112
Q ss_pred HHHHHHHHHhccCccccccCCCC---CCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEe
Q 047874 397 LYELLQEAVGLNTTGNVYNSNSL---STSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKR 473 (941)
Q Consensus 397 ~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~ 473 (941)
..+.+...+++||.+......+. ......|||+|.|+++++. ..+.+....+..++++.++||+|+||+|+++++.
T Consensus 427 ~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~-~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~ 505 (1034)
T 3ixz_A 427 TWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSE-LTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTL 505 (1034)
T ss_pred HHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHH-HhCCChHHHHHhCcceEEeeecCCCceEEEEEEe
Confidence 33445556677877655422211 1345679999999999998 5666665666778899999999999999988765
Q ss_pred cC--CceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccc-------
Q 047874 474 IN--EKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQV------- 544 (941)
Q Consensus 474 ~~--~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~------- 544 (941)
.+ ++++.+++|||||.|+++|++... +|...+++++.++.+.+..++++.+|+||+++|++.++..+...
T Consensus 506 ~~~~~~~~~l~~KGApe~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~ 584 (1034)
T 3ixz_A 506 EDPRDPRHVLVMKGAPERVLERCSSILI-KGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVE 584 (1034)
T ss_pred cCCCCccEEEEEeCChHHHHHHhHHhhc-CCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchh
Confidence 43 356889999999999999998774 67778899999999999999999999999999999886543221
Q ss_pred hhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC---------------
Q 047874 545 QEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVD--------------- 609 (941)
Q Consensus 545 ~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~--------------- 609 (941)
..+..|+|++|+|+++++||+|++++++|++|+++||+++|+|||+..+|.++|+++|+..++..
T Consensus 585 ~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~ 664 (1034)
T 3ixz_A 585 AMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQ 664 (1034)
T ss_pred hhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchh
Confidence 12235889999999999999999999999999999999999999999999999999999764321
Q ss_pred ---CCcccceecchhcccCCHHHHHHhhcCc--eEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEe
Q 047874 610 ---LNKDEAVIEGVQFRSLSAEERIAKIESI--RVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSM 684 (941)
Q Consensus 610 ---~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam 684 (941)
......+++|.++..+..+++.+..... .+|+|++|++|.++++.+|+.|+.|+|+|||.||+|||++||+||||
T Consensus 665 ~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAM 744 (1034)
T 3ixz_A 665 VNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAM 744 (1034)
T ss_pred ccccccceeEEecHhhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEe
Confidence 0123457889999999998888877665 49999999999999999999999999999999999999999999999
Q ss_pred cCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhh
Q 047874 685 GIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIM 764 (941)
Q Consensus 685 ~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~ 764 (941)
|.+|++.+|++||+++.+++++++++++++||++|+|+++++.|.+++|+..+++.+++.+++.+.|++++|+||+|+++
T Consensus 745 g~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~ 824 (1034)
T 3ixz_A 745 GIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCT 824 (1034)
T ss_pred CCccCHHHHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 98999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhcccCCCCCccCCCCCCC-CCCCccHHHHHHHH-HHHHHHHHHHHHHHHHhhcccC--------C--------
Q 047874 765 DTLGALALATEQPTNDLMSKPPVGR-SKPLITKIMWRNLI-SQAIYQVAILLTLQFKGRSILG--------V-------- 826 (941)
Q Consensus 765 ~~~~~~~l~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--------~-------- 826 (941)
|.+|+++|++|||++++|++||+++ +++++++.++...+ ..++++++..++.+++.....| .
T Consensus 825 d~~palal~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 904 (1034)
T 3ixz_A 825 DIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHH 904 (1034)
T ss_pred HHHHHHHhhcCCCChhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccccccccccccc
Confidence 9999999999999999999999987 68899988766644 3466665554444432211000 0
Q ss_pred -------------------ccccchhHHHHHHHHHHHHHHhhhccCCcccccc-cCcccHHHHHHHHHHHHHHHHH--HH
Q 047874 827 -------------------KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFK-GIHKNKLFLAIIGITIALQLVM--VE 884 (941)
Q Consensus 827 -------------------~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~~~~~~--~~ 884 (941)
.....+|++|.+++++|+++.+++|+. +.++|+ ++|+|+++++++++++++++++ +|
T Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~-~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p 983 (1034)
T 3ixz_A 905 LQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTR-RLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCP 983 (1034)
T ss_pred ccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccC-CCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence 001268999999999999999999985 466776 8899999999999988888765 45
Q ss_pred HhhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhcccc
Q 047874 885 FLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPVS 923 (941)
Q Consensus 885 ~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 923 (941)
+++.+|++.|+++.+|++++++++++++++|++|++.|+
T Consensus 984 ~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~ 1022 (1034)
T 3ixz_A 984 GMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRC 1022 (1034)
T ss_pred hHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 689999999999999999999999999999999998874
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-129 Score=1213.12 Aligned_cols=876 Identities=26% Similarity=0.353 Sum_probs=738.8
Q ss_pred hCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccc--cC
Q 047874 17 LGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQ--VG 94 (941)
Q Consensus 17 ~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~--~~ 94 (941)
..+++++++.|+++.++|||++| +++|+++||+|++++++.+++|+.+++||++|++++++++++++++.+... .+
T Consensus 50 ~~~~~~~~~~l~t~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~ 127 (1028)
T 2zxe_A 50 KLSLDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATE 127 (1028)
T ss_dssp SSCHHHHHHHHTCCSSSCBCHHH--HHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred hCCHHHHHHHhCcCccCCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccc
Confidence 56999999999999999999877 999999999999999888899999999999999999999999998764211 01
Q ss_pred ---CcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeec
Q 047874 95 ---LKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPA 171 (941)
Q Consensus 95 ---~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPa 171 (941)
....|++++.++++++++.+++.+++++.++..+++.++ .+.+++|+|||++++|+++||+|||+|.|++||+|||
T Consensus 128 ~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l-~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPa 206 (1028)
T 2zxe_A 128 DEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNM-VPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPA 206 (1028)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTT-SCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeec
Confidence 112466666666677777777888888777888888755 4678999999999999999999999999999999999
Q ss_pred ceEEEecceEEEeeccCCCCCCceecCCCC---------CeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCC
Q 047874 172 DGLFLNGHSLKVDESSMTGESDRVEVDEKN---------PFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEE 242 (941)
Q Consensus 172 D~~ll~g~~l~Vdes~LTGEs~pv~k~~~~---------~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 242 (941)
||+|++|+++.||||+|||||.|+.|.+++ |++|+||.+.+|.+.++|++||.+|.+|++.+++..++.++
T Consensus 207 D~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 286 (1028)
T 2zxe_A 207 DLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGR 286 (1028)
T ss_dssp EEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCC
T ss_pred eEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCC
Confidence 999999988899999999999999998643 57999999999999999999999999999999999989999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCch
Q 047874 243 TPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGL 322 (941)
Q Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L 322 (941)
+|+++.++++..++..++++++++++++.+ +.+. ++...+.+++++++++|||+|
T Consensus 287 t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~---~~~~----------------------~~~~~~~~~i~llv~~iP~~L 341 (1028)
T 2zxe_A 287 TPIAIEIEHFIHIITGVAVFLGVSFFILSL---ILGY----------------------SWLEAVIFLIGIIVANVPEGL 341 (1028)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTTC----------------------CHHHHHHHHHHHHHHHSCTTH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HccC----------------------cHHHHHHHHHHHHHHHcCchH
Confidence 999999999999998888887777766532 1221 345677888999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccch------hhhhHH
Q 047874 323 PLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACS------LELAQN 396 (941)
Q Consensus 323 ~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~------~~~~~~ 396 (941)
|++++++++.++.+|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+..+... .+..+.
T Consensus 342 p~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (1028)
T 2zxe_A 342 LATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSA 421 (1028)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCH
T ss_pred HHHHHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCH
Confidence 99999999999999999999999999999999999999999999999999999999876543221100 000112
Q ss_pred HHHHHHHHHhccCccccccCCCC---CCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEe
Q 047874 397 LYELLQEAVGLNTTGNVYNSNSL---STSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKR 473 (941)
Q Consensus 397 ~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~ 473 (941)
..+.+..++++||++........ ......|||+|.|+++++. +.+.+....+..++++.++||+|+||||+++++.
T Consensus 422 ~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~-~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~ 500 (1028)
T 2zxe_A 422 TWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIE-LCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHEN 500 (1028)
T ss_dssp HHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHH-HHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEEC
T ss_pred HHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHH-HhCCCHHHHHHhCceEEEeccCcccceEEEEEec
Confidence 23345556677877655422111 1234579999999999998 4433433445568899999999999999999986
Q ss_pred cC--CceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccc-------
Q 047874 474 IN--EKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQV------- 544 (941)
Q Consensus 474 ~~--~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~------- 544 (941)
.+ ++++.+++|||||.|+++|++... +|...+++++.++.+.+..++++++|+||+++|+|+++..+...
T Consensus 501 ~~~~~~~~~~~~KGA~e~il~~c~~~~~-~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~ 579 (1028)
T 2zxe_A 501 EKSSESRYLLVMKGAPERILDRCSTILL-NGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDAD 579 (1028)
T ss_dssp SCTTTCCEEEEEEECHHHHHTTEEEECB-TTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTT
T ss_pred cCCCCCcEEEEEeCCcHHHHHHhhhhhc-CCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchh
Confidence 42 456889999999999999987654 67778899988999999999999999999999999886532111
Q ss_pred hhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC--------------
Q 047874 545 QEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL-------------- 610 (941)
Q Consensus 545 ~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~-------------- 610 (941)
.....|+|++|+|+++++||+|++++++|++|+++||+++|+|||+..+|.++|+++||..++...
T Consensus 580 ~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~ 659 (1028)
T 2zxe_A 580 EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQ 659 (1028)
T ss_dssp TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGG
T ss_pred hhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhh
Confidence 112347899999999999999999999999999999999999999999999999999998543210
Q ss_pred ----CcccceecchhcccCCHHHHHHhhcCce--EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEe
Q 047874 611 ----NKDEAVIEGVQFRSLSAEERIAKIESIR--VMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSM 684 (941)
Q Consensus 611 ----~~~~~~~~g~~~~~~~~~~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam 684 (941)
.....+++|.++..+.++++.+.+.+.. +|+|++|+||..+|+.+|+.|+.|+|+|||.||+|||++||+||||
T Consensus 660 ~~~~~~~~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAm 739 (1028)
T 2zxe_A 660 VNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 739 (1028)
T ss_dssp SCGGGCCEEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE
T ss_pred ccccccceEEEEcHHhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEe
Confidence 1124588999999999988888777664 9999999999999999999999999999999999999999999999
Q ss_pred cCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhh
Q 047874 685 GIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVSSGKVPLTAVQLLWVNLIM 764 (941)
Q Consensus 685 ~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~ 764 (941)
|.+|++.++++||+++.+++++++++++++||++|+|+++++.|.+++|+..++..+++.++..+.|++++|++|+|+++
T Consensus 740 g~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~ 819 (1028)
T 2zxe_A 740 GISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGT 819 (1028)
T ss_dssp SSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTT
T ss_pred CCccCHHHHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHH
Confidence 97799999999999999999999999999999999999999999999999999888888888899999999999999999
Q ss_pred hHHHHHHhcccCCCCCccCCCCCCCCC-CCccHHHHHH-HHHHHHHHHHHHHHHHHHhhc---------------ccCCc
Q 047874 765 DTLGALALATEQPTNDLMSKPPVGRSK-PLITKIMWRN-LISQAIYQVAILLTLQFKGRS---------------ILGVK 827 (941)
Q Consensus 765 ~~~~~~~l~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------------~~~~~ 827 (941)
+.+|++++++|+|++++|++||++++. +++++.++.. ++..+++++++.++.+++... |+...
T Consensus 820 d~~pa~al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 899 (1028)
T 2zxe_A 820 DMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRW 899 (1028)
T ss_dssp THHHHHHGGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTT
T ss_pred HHHHHHHhccCccchhhhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhcccc
Confidence 999999999999999999999998765 9999887766 445567766655544432111 11100
Q ss_pred --------------------cccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccHHHHHHHHHHHHHHHHHHH--H
Q 047874 828 --------------------ESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVE--F 885 (941)
Q Consensus 828 --------------------~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~ 885 (941)
....+|++|.+++++|++|.+++|+. +.++|+..++|+++++++++++++++++++ +
T Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~ 978 (1028)
T 2zxe_A 900 ISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTR-RNSIFQQGMKNKILIFGLFEETALAAFLSYCPG 978 (1028)
T ss_dssp CCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS-SSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTT
T ss_pred ccccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccC-CcchhccCCcCHHHHHHHHHHHHHHHHHHHhhh
Confidence 01568999999999999999999984 566777448999999999988888877655 5
Q ss_pred hhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhcccc
Q 047874 886 LKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPVS 923 (941)
Q Consensus 886 ~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 923 (941)
++.+|++.|+++.+|++++++++..++++|+.|++.|+
T Consensus 979 ~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~ 1016 (1028)
T 2zxe_A 979 TDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRR 1016 (1028)
T ss_dssp HHHHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 78999999999999999999999999999999998763
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-126 Score=1194.02 Aligned_cols=884 Identities=27% Similarity=0.399 Sum_probs=741.4
Q ss_pred hhCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccC-
Q 047874 16 NLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVG- 94 (941)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~- 94 (941)
+-.+++++++.|++|.++|||++| +++|+++||+|+++.++++++|+.+++||++++++++++++++++++++.+.+
T Consensus 6 ~~~~~~~~~~~l~~~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~ 83 (995)
T 3ar4_A 6 HSKSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 83 (995)
T ss_dssp GGSCHHHHHHHHTCCTTTCBCHHH--HHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred hhCCHHHHHHHhCCCcccCCCHHH--HHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 346899999999999999999877 99999999999999988889999999999999999999999999988765432
Q ss_pred -CcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCE--EeeeecCCcccCcEEEEcCCCeeec
Q 047874 95 -LKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGR--RRGLSIFDVVVGEVVCLKTGDQIPA 171 (941)
Q Consensus 95 -~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~--~~~i~~~~Lv~GDiI~l~~G~~iPa 171 (941)
+...|+++..++++++++.+++.+++++.++..+++.+. .+.+++|+|||+ .++|+++||+|||+|.|++||+|||
T Consensus 84 ~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~-~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPa 162 (995)
T 3ar4_A 84 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEY-EPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPA 162 (995)
T ss_dssp GGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGG-SCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred cchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccc
Confidence 234688888888888788889999999988889998865 567899999987 6999999999999999999999999
Q ss_pred ceEEEe--cceEEEeeccCCCCCCceecCCC------------CCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcc
Q 047874 172 DGLFLN--GHSLKVDESSMTGESDRVEVDEK------------NPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISH 237 (941)
Q Consensus 172 D~~ll~--g~~l~Vdes~LTGEs~pv~k~~~------------~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~ 237 (941)
||+|++ +..|.||||+|||||.|+.|.++ ++++|+||.+.+|.++++|++||.+|.+||+.+++.+
T Consensus 163 D~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 242 (995)
T 3ar4_A 163 DIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAA 242 (995)
T ss_dssp EEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHT
T ss_pred cEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhc
Confidence 999964 45689999999999999999864 2689999999999999999999999999999999998
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHH
Q 047874 238 ELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVA 317 (941)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~ 317 (941)
++.+++|+++.+++++.++.++++.+++++++++... ...... ... +...+...+..++++++++
T Consensus 243 ~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~----------~~~~~~~~~~~ai~l~v~a 307 (995)
T 3ar4_A 243 TEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGH--FNDPVH---GGS----------WIRGAIYYFKIAVALAVAA 307 (995)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGG--GGSCSS---SSC----------HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccccc---cch----------HHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999999888776666554432110 100000 000 1123455677889999999
Q ss_pred cCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCccc-------------
Q 047874 318 IPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAM------------- 384 (941)
Q Consensus 318 ~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~------------- 384 (941)
|||+||++++++++.++.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+
T Consensus 308 iP~~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 387 (995)
T 3ar4_A 308 IPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITG 387 (995)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECC
T ss_pred cCcchHHHHHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccC
Confidence 9999999999999999999999999999999999999999999999999999999999998643211
Q ss_pred ---ccccch-------hhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCC-CC--cC----
Q 047874 385 ---KSDACS-------LELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGM-NV--DE---- 447 (941)
Q Consensus 385 ---~~~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~-~~--~~---- 447 (941)
.+.... ..........+..+.++|+++..............|||+|.|+++++. +.|. +. ..
T Consensus 388 ~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~-~~g~~~~~~~~i~~~ 466 (995)
T 3ar4_A 388 STYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVE-KMNVFNTEVRNLSKV 466 (995)
T ss_dssp SSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHH-HHCTTCCCCTTSCTT
T ss_pred CCcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHH-HcCCccccccccccc
Confidence 010000 000112233445566778776554322222334569999999999987 6665 11 10
Q ss_pred ---------cccccceeEEeCCCCCCCcEEEEEEecCCc----eEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHH
Q 047874 448 ---------PKQYCTVINVEAFNSEKKRSGVLMKRINEK----VFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQ 514 (941)
Q Consensus 448 ---------~~~~~~~l~~~~F~s~~k~~sviv~~~~~~----~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~ 514 (941)
.+..++++.++||+|+|||||++++..+++ ++.+|+|||||.|+++|++... ++...+++++.++.
T Consensus 467 ~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~ 545 (995)
T 3ar4_A 467 ERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEK 545 (995)
T ss_dssp TSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHH
T ss_pred cccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhc-CCCcccCCHHHHHH
Confidence 134578899999999999999999875541 4689999999999999988765 44667889988999
Q ss_pred HHHHHHHH--Hhcccceeeeeeecccccccc------chhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEE
Q 047874 515 IEKIIQEM--AAKSLRCIAFAHTKAAEADGQ------VQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMV 586 (941)
Q Consensus 515 ~~~~~~~~--~~~g~r~l~~a~~~~~~~~~~------~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~ 586 (941)
+.+..+++ +++|+||+++|||+++..+.. ......|+|++|+|+++++|++|++++++|+.|+++||+++|+
T Consensus 546 ~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~mi 625 (995)
T 3ar4_A 546 ILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMI 625 (995)
T ss_dssp HHHHHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhhhccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEE
Confidence 99999999 999999999999987543211 1234458899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEc
Q 047874 587 TGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTG 666 (941)
Q Consensus 587 TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iG 666 (941)
|||+..+|.++|+++|+...+.. ....+++|.+++.+.++++.+.+.+..+|+|++|++|.++|+.+|++|+.|+|+|
T Consensus 626 TGD~~~ta~~ia~~lgi~~~~~~--i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~G 703 (995)
T 3ar4_A 626 TGDNKGTAIAICRRIGIFGENEE--VADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTG 703 (995)
T ss_dssp ESSCHHHHHHHHHHHTSSCTTCC--CTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEE
T ss_pred CCCCHHHHHHHHHHcCcCCCCCc--ccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEc
Confidence 99999999999999999764321 1246899999999999999888888999999999999999999999999999999
Q ss_pred CCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 047874 667 DGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAVS 746 (941)
Q Consensus 667 Dg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~ 746 (941)
||.||+|||++||+||||| +|++.++++||+++.++++.++.+++++||++|+|+++++.|.+++|+..++..+++.++
T Consensus 704 DG~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~ 782 (995)
T 3ar4_A 704 DGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAAL 782 (995)
T ss_dssp CSGGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCchhHHHHHHCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 999999999999999999999999999999999999999999999999998888888888
Q ss_pred cCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-HHhhccc-
Q 047874 747 SGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILLTLQ-FKGRSIL- 824 (941)
Q Consensus 747 ~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 824 (941)
+.+.|++|+|++|+|+++|.+|+++++.++|++++|++||+.++++++++.++.+++..+++++++++..+ ++.....
T Consensus 783 g~~~pl~~~qil~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 862 (995)
T 3ar4_A 783 GLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAED 862 (995)
T ss_dssp TCCCSSCHHHHHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSS
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 88999999999999999999999999999999999999999999999999998888888888876554322 2111000
Q ss_pred -------CC---------------------ccccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccHHHHHHHHHHH
Q 047874 825 -------GV---------------------KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITI 876 (941)
Q Consensus 825 -------~~---------------------~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~ 876 (941)
.. .....+|++|.+++++|+++.+++|+.++..++.++|+|+++++++++++
T Consensus 863 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~ 942 (995)
T 3ar4_A 863 GPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSM 942 (995)
T ss_dssp SCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHH
T ss_pred ccccccchhccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHH
Confidence 00 01246899999999999999999998644444458899999999888887
Q ss_pred HHHHHHH--HHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhccc
Q 047874 877 ALQLVMV--EFLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922 (941)
Q Consensus 877 ~~~~~~~--~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~ 922 (941)
+++++++ ++++.+|++.++++.+|+++++++++.++++|++|++.|
T Consensus 943 ~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r 990 (995)
T 3ar4_A 943 SLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIAR 990 (995)
T ss_dssp HHHHHHHHSTHHHHHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7766554 567899999999999999999999999999999999876
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-117 Score=1081.43 Aligned_cols=810 Identities=21% Similarity=0.305 Sum_probs=661.7
Q ss_pred hCCHHH-HHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCC
Q 047874 17 LGGVNQ-VASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGL 95 (941)
Q Consensus 17 ~~~~~~-~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~ 95 (941)
.|+++. +.+.|+++..+|||++| +++|+++||+|+++.++ .++|..++++|++|++++++++++++++.+
T Consensus 69 ~~~~~~~~~~~l~t~~~~GLs~~e--a~~r~~~~G~N~l~~~~-~~~~~~~l~~f~~~~~~ll~~aai~s~~~g------ 139 (920)
T 1mhs_A 69 PGGGRVVPEDMLQTDTRVGLTSEE--VVQRRRKYGLNQMKEEK-ENHFLKFLGFFVGPIQFVMEGAAVLAAGLE------ 139 (920)
T ss_dssp HHHHSCCSSTTTTTCCCCCCCSHH--HHHHHHHTSSSSCCCCC-CSSHHHHTHHHHHHHHHHHHHHHHHCTTCS------
T ss_pred cCccchhHHHHhCCCcCCCCCHHH--HHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 355544 45679999889999987 99999999999999765 578889999999999999999999988775
Q ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEE
Q 047874 96 KEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLF 175 (941)
Q Consensus 96 ~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~l 175 (941)
.|.++..++++++++.+++.+++++.++..+++.+. .+.+++|+|||++++|+++||+|||+|.|++||+|||||+|
T Consensus 140 --~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l-~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~l 216 (920)
T 1mhs_A 140 --DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKT-LALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRI 216 (920)
T ss_dssp --CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC-CCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEE
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEE
Confidence 577877777777788889999999999999888765 45689999999999999999999999999999999999999
Q ss_pred Eecce-EEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHH
Q 047874 176 LNGHS-LKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTS 254 (941)
Q Consensus 176 l~g~~-l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~ 254 (941)
++|++ +.||||+|||||.|+.|.++ +.+|+||.+.+|.+.++|++||.+|++|++.+.+.+++.+++|+++.++++..
T Consensus 217 l~g~~~l~VDES~LTGES~PV~K~~g-d~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~ 295 (920)
T 1mhs_A 217 VTDDAFLQVDQSALTGESLAVDKHKG-DQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGT 295 (920)
T ss_dssp EEESSCCEEBCTTTSSCCCCEECCSS-CEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHH
T ss_pred EecCceeeeeccccCCCCcceEecCC-CeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHH
Confidence 99996 89999999999999999986 57999999999999999999999999999999998888889999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHH
Q 047874 255 WIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSM 334 (941)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~ 334 (941)
++..+++++++++++. +++.+ .++..++.+++++++++|||+||++++++++.++
T Consensus 296 ~l~~~~~~~~~i~~~~---~~~~~----------------------~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~ 350 (920)
T 1mhs_A 296 ILLILVIFTLLIVWVS---SFYRS----------------------NPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGA 350 (920)
T ss_dssp HHHHHHHHHHHHHHHT---TTTTT----------------------CCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---HHhcC----------------------CcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH
Confidence 8876655544433221 11111 0456778889999999999999999999999999
Q ss_pred HHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccc
Q 047874 335 KRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVY 414 (941)
Q Consensus 335 ~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 414 (941)
.+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+. ++.+ +.+ .+.++|+...
T Consensus 351 ~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-~~~~-----------~ll-~~a~l~~~~~-- 415 (920)
T 1mhs_A 351 AYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-VDPE-----------DLM-LTACLAASRK-- 415 (920)
T ss_dssp HHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-CCCT-----------HHH-HHHHHSCCCS--
T ss_pred HHHHhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-CCHH-----------HHH-HHHHHhcCCc--
Confidence 999999999999999999999999999999999999999998865432 1110 122 2333444311
Q ss_pred cCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhc
Q 047874 415 NSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMC 494 (941)
Q Consensus 415 ~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c 494 (941)
. ..+||+|.|+++++. +.+.. ......+++++.+||+|.+|+|+++++..++. ..+++|||||.++++|
T Consensus 416 ---~-----~~~~P~e~Al~~~~~-~~~~~-~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~-~~~~~KGape~il~~c 484 (920)
T 1mhs_A 416 ---K-----KGIDAIDKAFLKSLK-YYPRA-KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGE-RITCVKGAPLFVLKTV 484 (920)
T ss_dssp ---S-----CSCCSHHHHHHHHHH-HSSSC-CGGGSCCCEEEEEEEETTTTEEEEEECCSSSS-CEEEEEECHHHHHHHC
T ss_pred ---c-----cCCChHHHHHHHHHH-hcccc-hhhccccceeEEeeccCCCCeEEEEEEeCCCc-EEEEEeCCHHHHHHhc
Confidence 0 014999999999987 44432 12234578899999999999999999764444 5688999999999999
Q ss_pred ccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHH
Q 047874 495 SHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVE 574 (941)
Q Consensus 495 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~ 574 (941)
+.. .+++++.++.+.+..++++++|+|++++|++.. |++++|+|+++++||+|++++++|+
T Consensus 485 ~~~-------~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~------------e~~l~~lGli~i~Dp~R~ea~~aI~ 545 (920)
T 1mhs_A 485 EED-------HPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG------------EGSWEILGIMPCMDPPRHDTYKTVC 545 (920)
T ss_dssp CCS-------SCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS------------SCSCCCCBBCCCCCCCCHHHHHHHH
T ss_pred ccc-------CCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc------------ccccEEEEEEEEeccccccHHHHHH
Confidence 741 246777788889999999999999999999742 5688999999999999999999999
Q ss_pred HHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHH
Q 047874 575 SCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQS 654 (941)
Q Consensus 575 ~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~ 654 (941)
+|+++||+++|+|||++.||.++|+++||.... .+....+++|. +.++++++.+.+.+..+|+|++|+||.++|+.
T Consensus 546 ~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~--~~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~ 621 (920)
T 1mhs_A 546 EAKTLGLSIKMLTGDAVGIARETSRQLGLGTNI--YNAERLGLGGG--GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEI 621 (920)
T ss_dssp HHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSC--CCSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHH
T ss_pred HHhhcCceEEEEcCCCHHHHHHHHHHcCCCccc--cCccceeecCc--ccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHH
Confidence 999999999999999999999999999997421 11233455665 45666677777888899999999999999999
Q ss_pred HHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 655 LKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNV 734 (941)
Q Consensus 655 l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~ 734 (941)
+|++|+.|+|+|||.||+|||++||+||||| +|++.++++||+++.+++++++.+++++||++|+|+++++.|.++.|+
T Consensus 622 Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~ 700 (920)
T 1mhs_A 622 LQQRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSI 700 (920)
T ss_dssp HHTTTCCCEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCeEEEEcCCcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Q 047874 735 AALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILL 814 (941)
Q Consensus 735 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (941)
....+..+...+.+ .|+++.|++|+|++.+. |++++++++++.+ ++|++++.+-+ +..++..+++.+...+
T Consensus 701 ~~~~~~~~~~~~~~-~~l~~~~il~~~l~~d~-~~lal~~e~~~~~---~~P~~~~~~~~----~~~~~~~g~~~~~~~~ 771 (920)
T 1mhs_A 701 HLEIFLGLWIAILN-RSLNIELVVFIAIFADV-ATLAIAYDNAPYS---QTPVKWNLPKL----WGMSVLLGVVLAVGTW 771 (920)
T ss_dssp HHHHHHHHHHHSCS-CCCCHHHHHHHHHHHTT-HHHHCCCCCSGGG---GSCCCCCSSSC----SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-ccCCHHHHHHHHHHHHH-HhhhhcccCcccc---cCCCCchHHHH----HHHHHHHHHHHHHHHH
Confidence 76443333333333 34899999999999997 8999999988654 56766553222 2222333444433332
Q ss_pred HHHHHhhcc---cC--CccccchhHHHHHHHHHHHHHHhhhccCCcccccccCcccHHHHHHHHHHHHHHHHHHHHhhhc
Q 047874 815 TLQFKGRSI---LG--VKESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVMVEFLKTF 889 (941)
Q Consensus 815 ~~~~~~~~~---~~--~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~ 889 (941)
+.+++.... .+ .+....+|++|.+++++|+++.+++|+. .++|++. .|+++++++++..++++++.+ .+ +
T Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~-~ 846 (920)
T 1mhs_A 772 ITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITRAN--GPFWSSI-PSWQLSGAIFLVDILATCFTI-WG-W 846 (920)
T ss_dssp HHHHHHTTTTTTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCS--SSCSCCS-CTHHHHHHHHHHHHHHHHHHS-SS-S
T ss_pred HHHHHHHHhcccccccchhhHHHHHHHHHHHHHHHHHHHHhccc--hhhhcCc-hHHHHHHHHHHHHHHHHHHHH-hh-h
Confidence 222211110 11 1234689999999999999999999984 3477654 788877777777766665543 33 8
Q ss_pred ccccCCChHHHHHHHHHHHHHHHHHHHHHhccccCcccc
Q 047874 890 ADTERLNWGQWAACIGIAAMSWPIGFLIKCIPVSGKQLL 928 (941)
Q Consensus 890 f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 928 (941)
|++.|++|.+|+++++++++.+++.|+.|++.++.++|-
T Consensus 847 f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~fd 885 (920)
T 1mhs_A 847 FEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDSVGFD 885 (920)
T ss_dssp TTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCCCTTH
T ss_pred hccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 999999999999999999999999999999888776553
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-116 Score=1068.28 Aligned_cols=814 Identities=21% Similarity=0.314 Sum_probs=632.1
Q ss_pred hCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCCc
Q 047874 17 LGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGLK 96 (941)
Q Consensus 17 ~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~~ 96 (941)
-.+.+|+++.|+++ .+|||++| +++|+++||+|+++.++ +++|+.+++||.+|++++++++++++++.+... +..
T Consensus 16 ~~~~~~~~~~l~~~-~~GLs~~e--~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~-~~~ 90 (885)
T 3b8c_A 16 KIPIEEVFQQLKCS-REGLTTQE--GEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANGD-GRP 90 (885)
T ss_dssp SSSTTCCTTTSSSC-SSCSTHHH--HHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCT-TSC
T ss_pred hCCHHHHHHHhCCC-CCCCCHHH--HHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccc
Confidence 46899999999998 68999987 99999999999999876 677888899999999999999999998876322 233
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEE
Q 047874 97 EGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFL 176 (941)
Q Consensus 97 ~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll 176 (941)
..|+++..++++++++..++.+++++.++..+++.+. .+.+++|+|||++++|+++||+|||+|.|++||+|||||+|+
T Consensus 91 ~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~-~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll 169 (885)
T 3b8c_A 91 PDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAG-LAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLL 169 (885)
T ss_dssp SCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTS-CSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEE
Confidence 4688887776666666777888888888888888755 456899999999999999999999999999999999999999
Q ss_pred ecceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHH
Q 047874 177 NGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWI 256 (941)
Q Consensus 177 ~g~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~ 256 (941)
+|+++.||||+|||||.|+.|.++ +.+|+||.+.+|.+.++|++||.+|.+||+.+.+.. ..+++|+++.++++..++
T Consensus 170 ~g~~l~VdES~LTGES~Pv~K~~g-~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~ 247 (885)
T 3b8c_A 170 EGDPLKVDQSALTGESLPVTKHPG-QEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFC 247 (885)
T ss_dssp CSSCBCCCCCSTTCCSSCCCBSSC-CCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHHHH
T ss_pred EcCcccccccccCCCCcceEecCC-CccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHHHHHH
Confidence 999889999999999999999986 469999999999999999999999999999988766 567899999999998774
Q ss_pred HHH-HHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHH
Q 047874 257 GKI-GLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMK 335 (941)
Q Consensus 257 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~ 335 (941)
... ++.+++++++. ++..+ . ++...+..++++++++|||+||++++++++.++.
T Consensus 248 ~~~~~~~~~~~~~~~---~~~~~--------~--------------~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~ 302 (885)
T 3b8c_A 248 ICSIAIGMVIEIIVM---YPIQR--------R--------------KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 302 (885)
T ss_dssp HHHHHHHHHHHSTTT---TTTTC--------S--------------CSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHH
T ss_pred HHHHHHHHHHHHHHH---HHHcc--------C--------------cHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 332 22122211111 11111 0 1224567889999999999999999999999999
Q ss_pred HHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCcccccc
Q 047874 336 RMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYN 415 (941)
Q Consensus 336 ~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 415 (941)
+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.+.. .+... .+. .+.+.. .++|+..
T Consensus 303 r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~~~-----~~~--~~ll~~-aa~~~~~---- 368 (885)
T 3b8c_A 303 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFCKG-----VEK--DQVLLF-AAMASRV---- 368 (885)
T ss_dssp HHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSCSS-----TTH--HHHHHH-HHHHCCS----
T ss_pred HHHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--ccCCC-----CCH--HHHHHH-HHHHhCC----
Confidence 999999999999999999999999999999999999999743211 01100 011 122332 3344321
Q ss_pred CCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcc
Q 047874 416 SNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCS 495 (941)
Q Consensus 416 ~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~ 495 (941)
.++||+|.|+++++. + ....+..++.++.+||+|.+|+|+++++..++ ++++++|||||.++++|+
T Consensus 369 --------~~~~p~~~Al~~~~~-~----~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g-~~~~~~KGa~e~il~~c~ 434 (885)
T 3b8c_A 369 --------ENQDAIDAAMVGMLA-D----PKEARAGIREVHFLPFNPVDKRTALTYIDGSG-NWHRVSKGAPEQILELAK 434 (885)
T ss_dssp --------SSCCSHHHHHHHTTC-C----TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSS-CBCBCCCCSGGGTSSSSC
T ss_pred --------CCCCchHHHHHHHhh-c----hhhHhhcCceeecccCCcccceEEEEEEecCC-cEEEEEeCCHHHHHHhcc
Confidence 147999999998764 2 12234456788899999999999998875433 366889999999999996
Q ss_pred cccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHH
Q 047874 496 HYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVES 575 (941)
Q Consensus 496 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~ 575 (941)
. +++.++.+.+..++++++|+|++++|+++++..+ .+..|+|++|+|+++++||+|++++++|++
T Consensus 435 ~-----------~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~----~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~ 499 (885)
T 3b8c_A 435 A-----------SNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT----KESPGAPWEFVGLLPLFDPPRHDSAETIRR 499 (885)
T ss_dssp C-----------CSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS----SSCCCCCCCCCEEEEECCCCCHHHHHHHHH
T ss_pred C-----------chhhHHHHHHHHHHHHhCCCeEEEEEEecccccc----ccccccCcEEEEEEEeecccchhHHHHHHH
Confidence 3 1222345677888999999999999999875432 234578899999999999999999999999
Q ss_pred HHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhccc-CCHHHHHHhhcCceEEEecCHHHHHHHHHH
Q 047874 576 CRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRS-LSAEERIAKIESIRVMARSSPLDKLLMVQS 654 (941)
Q Consensus 576 l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~ 654 (941)
|+++||+++|+|||+..+|.++|+++||..+.. ...++.|.+++. ++++++.+.+.+..+|+|++|+||.++|+.
T Consensus 500 l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~----~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~ 575 (885)
T 3b8c_A 500 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY----PSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKK 575 (885)
T ss_dssp HHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCS----TTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHH
T ss_pred HHHcCCcEEEEcCCChHHHHHHHHHhCCccccC----CcceeeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHHH
Confidence 999999999999999999999999999975311 234567777665 555566777788889999999999999999
Q ss_pred HHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 655 LKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNV 734 (941)
Q Consensus 655 l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~ 734 (941)
+|++|+.|+|+|||.||+|||++||+||||| +|++.++++||+++.+++++++++++++||++|+|+++++.|.+++|+
T Consensus 576 lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~ 654 (885)
T 3b8c_A 576 LQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 654 (885)
T ss_dssp HHHTTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 899999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Q 047874 735 AALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAILL 814 (941)
Q Consensus 735 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (941)
..++..++.. ...+.|++|+|++|+|++.+..+ ++++.+++++. ++| +...+ +.++...+..+++.++..+
T Consensus 655 ~~~~~~~~~~-~~~~~~l~p~~il~i~l~~d~~~-l~l~~~~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~~~~~ 725 (885)
T 3b8c_A 655 RIVFGFMLIA-LIWEFDFSAFMVLIIAILNDGTI-MTISKDRVKPS---PTP---DSWKL-KEIFATGVVLGGYQAIMTV 725 (885)
T ss_dssp TTTSTTHHHH-SSCSSCSCHHHHHHHHHHHHTTT-CCCCCCCCCCS---SCC---CSTTT-TTTTTTHHHHHSSTHHHHT
T ss_pred HHHHHHHHHH-HccCcCcCHHHHHHHHHHHHHHH-HhhcccccCcc---cCC---cchhH-HHHHHHHHHHHHHHHHHHH
Confidence 6544333333 35567999999999999999875 88888776442 222 22222 3333334455555555554
Q ss_pred HHHHHhhc------ccCCc-----cccchhH-HHHHHHHHHHHHHhhhccCCcccccccCcccHHHHHHHHHHHHHHHHH
Q 047874 815 TLQFKGRS------ILGVK-----ESVKDTM-IFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQLVM 882 (941)
Q Consensus 815 ~~~~~~~~------~~~~~-----~~~~~t~-~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 882 (941)
+++++... .++.+ ....+|. +|.++++.|+ +.+++|+. +.++|+.+ .|++++.+++..++++++.
T Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 802 (885)
T 3b8c_A 726 IFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSR-SWSFVERP-GALLMIAFLIAQLIATLIA 802 (885)
T ss_dssp TSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSC-TTTSTTST-TTTTSGGGSSTTTTTTSSS
T ss_pred HHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHH-HHHHhccC-CCCcccCc-cHHHHHHHHHHHHHHHHHH
Confidence 44433221 11221 1234344 4446677775 78999984 34455433 3443333333333333333
Q ss_pred HHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhcccc
Q 047874 883 VEFLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPVS 923 (941)
Q Consensus 883 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 923 (941)
++....+|++.|++|.+|+++++.+++.+++.|+.|++.++
T Consensus 803 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~ 843 (885)
T 3b8c_A 803 VYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRY 843 (885)
T ss_dssp SSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTT
T ss_pred HhccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33223345699999999999999999999999999988664
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-80 Score=737.96 Aligned_cols=513 Identities=27% Similarity=0.395 Sum_probs=430.2
Q ss_pred CccchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEE-CCEEeeeecCCcccCcEEEEcCCCeeecceE
Q 047874 97 EGWFDGGSIIF-AVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVR-DGRRRGLSIFDVVVGEVVCLKTGDQIPADGL 174 (941)
Q Consensus 97 ~~~~~~~~i~~-~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R-~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ 174 (941)
..||++..+++ .+++.-.++...+.+.++..+++.+. .+.+++|+| ||++++|++++|+|||+|+|++||+|||||+
T Consensus 185 ~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l-~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~ 263 (736)
T 3rfu_A 185 AVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKL-VPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGE 263 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCC-CCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEE
Confidence 45777664443 33333333333333444456666544 466888888 9999999999999999999999999999999
Q ss_pred EEecceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHH
Q 047874 175 FLNGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTS 254 (941)
Q Consensus 175 ll~g~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~ 254 (941)
|++|++ .||||+|||||.|+.|.+++ .+++||.+.+|.+.++|++||.+|.+|++.+.+.+++.+++|+|+.+++++.
T Consensus 264 vl~G~~-~VDES~LTGES~Pv~K~~gd-~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~ 341 (736)
T 3rfu_A 264 VQEGRS-FVDESMVTGEPIPVAKEASA-KVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSG 341 (736)
T ss_dssp ECSSCE-EEECSSSTTCSSCEEECTTC-EECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHH
T ss_pred EEECce-EeeecccCCccccEEeccCC-cCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHH
Confidence 999997 89999999999999999865 5999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHH
Q 047874 255 WIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSM 334 (941)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~ 334 (941)
++.++++.++++++++|++ .+... .+...+..++++++++|||+|++++++++..+.
T Consensus 342 ~~v~~vl~ia~~~~~~w~~---~~~~~--------------------~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~ 398 (736)
T 3rfu_A 342 WFVPAVILVAVLSFIVWAL---LGPQP--------------------ALSYGLIAAVSVLIIACPCALGLATPMSIMVGV 398 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHH---HCSSS--------------------STTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH---hCCCc--------------------hHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHH
Confidence 9999999999888877543 22110 134568889999999999999999999999999
Q ss_pred HHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccc
Q 047874 335 KRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVY 414 (941)
Q Consensus 335 ~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 414 (941)
.+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+. + . .+.+..+.+++
T Consensus 399 ~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~--~--------~---~~~l~~aa~le------ 459 (736)
T 3rfu_A 399 GKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDF--V--------E---DNALALAAALE------ 459 (736)
T ss_dssp HHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSS--C--------H---HHHHHHHHHHH------
T ss_pred HHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCC--C--------H---HHHHHHHHHHh------
Confidence 999999999999999999999999999999999999999999984321 1 0 12222222221
Q ss_pred cCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhc
Q 047874 415 NSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMC 494 (941)
Q Consensus 415 ~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c 494 (941)
..+.||++.|++++++ +.+.... ...+|++.+++. +.. ..++..+ .+|+++.+.+.+
T Consensus 460 --------~~s~hPla~Aiv~~a~-~~~~~~~---------~~~~f~~~~g~g-v~~-~~~g~~~---~~G~~~~~~~~~ 516 (736)
T 3rfu_A 460 --------HQSEHPLANAIVHAAK-EKGLSLG---------SVEAFEAPTGKG-VVG-QVDGHHV---AIGNARLMQEHG 516 (736)
T ss_dssp --------HSSCCHHHHHHHHHHH-TTCCCCC---------CCSCCCCCTTTE-EEE-CSSSSCE---EEESHHHHHHHC
T ss_pred --------hcCCChHHHHHHHHHH-hcCCCcc---------CcccccccCCce-EEE-EECCEEE---EEcCHHHHHHcC
Confidence 1256999999999997 5554432 234677777664 322 2344433 469999886543
Q ss_pred ccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHH
Q 047874 495 SHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVE 574 (941)
Q Consensus 495 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~ 574 (941)
.. ...+.+..++++.+|+|++++|+ |.+++|+++++|++|++++++|+
T Consensus 517 ~~---------------~~~~~~~~~~~~~~G~~vl~va~-----------------d~~~~G~i~i~D~i~~~~~~aI~ 564 (736)
T 3rfu_A 517 GD---------------NAPLFEKADELRGKGASVMFMAV-----------------DGKTVALLVVEDPIKSSTPETIL 564 (736)
T ss_dssp CC---------------CHHHHHHHHHHHHTTCEEEEEEE-----------------TTEEEEEEEEECCBCSSHHHHHH
T ss_pred CC---------------hhHHHHHHHHHHhcCCeEEEEEE-----------------CCEEEEEEEeeccchhhHHHHHH
Confidence 21 12345667889999999999997 45899999999999999999999
Q ss_pred HHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHH
Q 047874 575 SCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQS 654 (941)
Q Consensus 575 ~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~ 654 (941)
+|+++|++++|+|||+..+|.++|+++|++. ++++++|++|.++++.
T Consensus 565 ~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~---------------------------------v~a~~~P~~K~~~v~~ 611 (736)
T 3rfu_A 565 ELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK---------------------------------VVAEIMPEDKSRIVSE 611 (736)
T ss_dssp HHHHHTCEEEEECSSCHHHHHHHHHHHTCCC---------------------------------EECSCCHHHHHHHHHH
T ss_pred HHHHCCCeEEEECCCCHHHHHHHHHHcCCCE---------------------------------EEEecCHHHHHHHHHH
Confidence 9999999999999999999999999999975 8999999999999999
Q ss_pred HHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 655 LKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNV 734 (941)
Q Consensus 655 l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~ 734 (941)
+|++|+.|+|+|||.||+|||++||+||||| ++++.++++||+++.+++++++.+++++||++++|+++++.|++.||+
T Consensus 612 l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~ 690 (736)
T 3rfu_A 612 LKDKGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNV 690 (736)
T ss_dssp HHHHSCCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCEEEEEECChHhHHHHHhCCEEEEeC-CccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 047874 735 AALVINFGA 743 (941)
Q Consensus 735 ~~~~~~~~~ 743 (941)
+.++++++.
T Consensus 691 ~~iplAag~ 699 (736)
T 3rfu_A 691 LGVPLAAGV 699 (736)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHHHH
Confidence 988776643
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-77 Score=710.06 Aligned_cols=478 Identities=27% Similarity=0.402 Sum_probs=403.1
Q ss_pred HHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCCCCeEee
Q 047874 127 FQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKNPFLLS 206 (941)
Q Consensus 127 ~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~~l~a 206 (941)
.+++.+. .+.+++|+|||++++|+++||+|||+|.|++||+|||||+|++|++ .||||+|||||.|+.|.+++ .+|+
T Consensus 124 l~~l~~l-~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VdeS~LTGES~Pv~K~~g~-~v~~ 200 (645)
T 3j08_A 124 IKKLVGL-QAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGD-EVFG 200 (645)
T ss_dssp CHHHHHT-SCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTC-EECT
T ss_pred HHHHhcC-CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECcE-EEEcccccCCCCceecCCCC-Eeec
Confidence 4444433 5678999999999999999999999999999999999999999987 89999999999999999865 5999
Q ss_pred ccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCc
Q 047874 207 GTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGK 286 (941)
Q Consensus 207 Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (941)
||.+.+|.++++|++||.+|.+|++.+.+.+++.+++|+++.+++++.++.++++.++++++++|. +...
T Consensus 201 Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~---~~~~------- 270 (645)
T 3j08_A 201 ATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWY---FIAH------- 270 (645)
T ss_dssp TCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSS---CCCS-------
T ss_pred cEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcC-------
Confidence 999999999999999999999999999999999999999999999999999888888777665531 1110
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccc
Q 047874 287 REFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGT 366 (941)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGT 366 (941)
. ++...+..++++++++|||+|++++++++..++.+++++|+++|+++++|+||++|++|||||||
T Consensus 271 ~--------------~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGT 336 (645)
T 3j08_A 271 A--------------PLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGT 336 (645)
T ss_dssp C--------------SCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGT
T ss_pred C--------------cHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCccc
Confidence 0 11123556788999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCc
Q 047874 367 LTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVD 446 (941)
Q Consensus 367 LT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~ 446 (941)
||+|+|+|.+++..+.. . .+.+..+..+. ..+.||++.|+++++. +.|.+..
T Consensus 337 LT~~~~~v~~~~~~~~~----------~---~~~l~~aa~~e--------------~~s~hPla~Aiv~~a~-~~g~~~~ 388 (645)
T 3j08_A 337 LTKGKPEVTDLVPLNGD----------E---RELLRLAAIAE--------------RRSEHPIAEAIVKKAL-EHGIELG 388 (645)
T ss_dssp SSSSCCEEEEEEESSSC----------H---HHHHHHHHHHH--------------TTCCSHHHHHHHHHHH-HTTCCCC
T ss_pred ccCCCeEEEEEEeCCCC----------H---HHHHHHHHHHh--------------hcCCChhHHHHHHHHH-hcCCCcC
Confidence 99999999999876421 1 12222222211 1256999999999998 6665543
Q ss_pred CcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcc
Q 047874 447 EPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKS 526 (941)
Q Consensus 447 ~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g 526 (941)
... +|++..++ ++.. ..+.+|+++.+.+.... . .+.+.+..+++..+|
T Consensus 389 ~~~---------~~~~~~g~-g~~~--------~~v~~g~~~~~~~~~~~----------~----~~~~~~~~~~~~~~g 436 (645)
T 3j08_A 389 EPE---------KVEVIAGE-GVVA--------DGILVGNKRLMEDFGVA----------V----SNEVELALEKLEREA 436 (645)
T ss_dssp SCC---------CCEEETTT-EEEE--------TTEEEECHHHHHHTTCC----------C----CHHHHHHHHHHHTTT
T ss_pred Ccc---------ceEEecCC-ceEE--------EEEEECCHHHHHhcCCC----------c----cHHHHHHHHHHHhcC
Confidence 221 11111111 1111 12356888877543221 1 234566778889999
Q ss_pred cceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCC
Q 047874 527 LRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNP 606 (941)
Q Consensus 527 ~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~ 606 (941)
+|++.+++ |++++|+++++|++|++++++|++|+++|++++|+|||+..+|.++|+++|+..
T Consensus 437 ~~~l~va~-----------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~- 498 (645)
T 3j08_A 437 KTAVIVAR-----------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL- 498 (645)
T ss_dssp CCCEEEEE-----------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-
T ss_pred CeEEEEEE-----------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-
Confidence 99999987 568999999999999999999999999999999999999999999999999974
Q ss_pred CCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecC
Q 047874 607 DVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGI 686 (941)
Q Consensus 607 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~ 686 (941)
++++++|++|.++++.++++ +.|+|+|||.||+||+++||+|||||
T Consensus 499 --------------------------------~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg- 544 (645)
T 3j08_A 499 --------------------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG- 544 (645)
T ss_dssp --------------------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEEC-
T ss_pred --------------------------------EEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeC-
Confidence 89999999999999999998 89999999999999999999999999
Q ss_pred CCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 687 QGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGA 743 (941)
Q Consensus 687 ~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 743 (941)
++++.++++||+++.+++++++.+++++||++++|+++++.|++++|++.+++.++.
T Consensus 545 ~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la~~~ 601 (645)
T 3j08_A 545 SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGL 601 (645)
T ss_dssp CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999877766544
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-76 Score=715.33 Aligned_cols=480 Identities=26% Similarity=0.399 Sum_probs=405.6
Q ss_pred HHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCCCCeEee
Q 047874 127 FQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKNPFLLS 206 (941)
Q Consensus 127 ~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~~l~a 206 (941)
.+++.+. .+.+++|+|||++++|+++||+|||+|.|++||+|||||+|++|++ .||||+|||||.|+.|.+++ .+|+
T Consensus 202 i~~l~~l-~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VdeS~LTGES~pv~K~~g~-~v~~ 278 (723)
T 3j09_A 202 IKKLVGL-QAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGD-EVFG 278 (723)
T ss_dssp THHHHHT-SCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTC-EECT
T ss_pred HHHHHhc-CCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECCe-EEecccccCCCcceeecCCC-eecc
Confidence 4444433 5678999999999999999999999999999999999999999987 89999999999999999865 5999
Q ss_pred ccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCc
Q 047874 207 GTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGK 286 (941)
Q Consensus 207 Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (941)
||.+.+|.+.++|++||.+|.+|++.+.+.+++.+++|+++.+++++.++.++++.++++++++|+ +...
T Consensus 279 Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~---~~~~------- 348 (723)
T 3j09_A 279 ATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWY---FIAH------- 348 (723)
T ss_dssp TCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSC---SSTT-------
T ss_pred ceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcC-------
Confidence 999999999999999999999999999999999999999999999999999888888777665531 1110
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHhhhhhhccCchhhhhccCeeEEEeCcccc
Q 047874 287 REFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFSMKRMMKDHAMVRKLSACETMGSATTICTDKTGT 366 (941)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGT 366 (941)
. ++...+..++++++++|||+|++++++++..++.+++++|+++|+++++|+||++|++|||||||
T Consensus 349 ~--------------~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGT 414 (723)
T 3j09_A 349 A--------------PLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGT 414 (723)
T ss_dssp C--------------TTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHH
T ss_pred C--------------cHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCc
Confidence 0 12234677899999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCc
Q 047874 367 LTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVD 446 (941)
Q Consensus 367 LT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~ 446 (941)
||+|+|+|.+++..+.. . .+.+..+..+. ..+.||++.|+++++. +.+.+..
T Consensus 415 LT~g~~~v~~~~~~~~~----------~---~~~l~~aa~~e--------------~~s~hP~~~Ai~~~a~-~~~~~~~ 466 (723)
T 3j09_A 415 LTKGKPEVTDLVPLNGD----------E---RELLRLAAIAE--------------RRSEHPIAEAIVKKAL-EHGIELG 466 (723)
T ss_dssp TSCSCCEEEEEEESSSC----------H---HHHHHHHHHHH--------------TTCCSHHHHHHHHHHH-HTTCCCC
T ss_pred cccCceEEEEEEeCCCC----------H---HHHHHHHHHHh--------------ccCCCchhHHHHHHHH-hcCCCcC
Confidence 99999999999876421 1 12222222211 1256999999999998 6665543
Q ss_pred CcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcc
Q 047874 447 EPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKS 526 (941)
Q Consensus 447 ~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g 526 (941)
... +|++..++ ++.. ..+.+|+++.+.+.... . .+.+.+..++++.+|
T Consensus 467 ~~~---------~~~~~~g~-g~~~--------~~~~~g~~~~~~~~~~~----------~----~~~~~~~~~~~~~~g 514 (723)
T 3j09_A 467 EPE---------KVEVIAGE-GVVA--------DGILVGNKRLMEDFGVA----------V----SNEVELALEKLEREA 514 (723)
T ss_dssp SCC---------CCEEETTT-EEEE--------TTEEEECHHHHHHTTCC----------C----CHHHHHHHHHHHTTT
T ss_pred Ccc---------ceEEecCC-ceEE--------EEEEECCHHHHHhcCCC----------c----cHHHHHHHHHHHhcC
Confidence 221 11111111 1111 12356888877543221 1 234566778899999
Q ss_pred cceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCC
Q 047874 527 LRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNP 606 (941)
Q Consensus 527 ~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~ 606 (941)
+|++++++ |++++|+++++|++|++++++|++|+++|++++|+|||+..+|.++|+++|+..
T Consensus 515 ~~~~~va~-----------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~- 576 (723)
T 3j09_A 515 KTAVIVAR-----------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL- 576 (723)
T ss_dssp CEEEEEEE-----------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-
T ss_pred CeEEEEEE-----------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE-
Confidence 99999987 568999999999999999999999999999999999999999999999999974
Q ss_pred CCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecC
Q 047874 607 DVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGI 686 (941)
Q Consensus 607 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~ 686 (941)
++++++|++|.++++.++++ +.|+|+|||.||+|||++||+|||||
T Consensus 577 --------------------------------~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg- 622 (723)
T 3j09_A 577 --------------------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG- 622 (723)
T ss_dssp --------------------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECC-
T ss_pred --------------------------------EEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeC-
Confidence 89999999999999999988 89999999999999999999999999
Q ss_pred CCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 687 QGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFGAAV 745 (941)
Q Consensus 687 ~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~ 745 (941)
++++.++++||+++.+++++++.+++++||++++|+++++.|++++|++.+++.++..+
T Consensus 623 ~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~~~~ 681 (723)
T 3j09_A 623 SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLY 681 (723)
T ss_dssp CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999998777665433
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-30 Score=274.07 Aligned_cols=260 Identities=25% Similarity=0.394 Sum_probs=195.4
Q ss_pred HHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCcc
Q 047874 332 FSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTG 411 (941)
Q Consensus 332 ~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 411 (941)
.++.+++++|+++|+.+++|.|+++++||||||||||+|+|.+.++. +. ++ .+..+..+
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~------~~--------~~---~l~~~~~~---- 62 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI------GD--------SL---SLAYAASV---- 62 (263)
Confidence 35678999999999999999999999999999999999999998764 00 01 11111111
Q ss_pred ccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHH
Q 047874 412 NVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMIL 491 (941)
Q Consensus 412 ~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~ 491 (941)
...+.||...|+.++++ +.|.+.... ..|... .+ +|....+-
T Consensus 63 ----------e~~s~hp~a~ai~~~~~-~~g~~~~~~---------~~~~~~-----------~G-------~g~~~~~~ 104 (263)
T 2yj3_A 63 ----------EALSSHPIAKAIVKYAK-EQGVKILEV---------KDFKEI-----------SG-------IGVRGKIS 104 (263)
Confidence 12356999999988776 443321110 001000 00 01111110
Q ss_pred hhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHH
Q 047874 492 VMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRA 571 (941)
Q Consensus 492 ~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~ 571 (941)
... +. -|. ..+|.+ +.++ .+..+.|.+.+.|+++|++.+
T Consensus 105 ~~~--~~--~G~-------------------~~~~~~-~~~~-----------------~~~~~~~~~~~~~~~~~g~~~ 143 (263)
T 2yj3_A 105 DKI--IE--VKK-------------------AENNND-IAVY-----------------INGEPIASFNISDVPRPNLKD 143 (263)
Confidence 000 00 000 001222 2222 234688999999999999999
Q ss_pred HHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHH
Q 047874 572 AVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLM 651 (941)
Q Consensus 572 ~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 651 (941)
+++.|+++|++++|+||++...+..+++++|+.. +|....|+.|...
T Consensus 144 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------~f~~~~p~~k~~~ 190 (263)
T 2yj3_A 144 YLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE---------------------------------YYSNLSPEDKVRI 190 (263)
Confidence 9999999999999999999999999999999864 5777779999999
Q ss_pred HHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHH
Q 047874 652 VQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKF 725 (941)
Q Consensus 652 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~ 725 (941)
++.++..++.|+|||||.||++|+++||+|+++| ++.+.+++.||+++.++++..+.++++.+|+++++|++|
T Consensus 191 ~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 191 IEKLKQNGNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 9999998999999999999999999999999999 788889999999998889999999999999999999986
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.93 E-value=6.9e-25 Score=237.45 Aligned_cols=280 Identities=28% Similarity=0.428 Sum_probs=204.5
Q ss_pred HHHHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCcc
Q 047874 332 FSMKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTG 411 (941)
Q Consensus 332 ~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 411 (941)
.+.++++|+|+++|+++++|+++++++||||||||||.+.+.+.+++..+. + .++. +..+.++.
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~--------~~~~---l~~~~~~e--- 71 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--D--------EREL---LRLAAIAE--- 71 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--C--------HHHH---HHHHHHHT---
T ss_pred hhHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC--C--------HHHH---HHHHHHHh---
Confidence 467889999999999999999999999999999999999999998877543 1 1122 22222111
Q ss_pred ccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHH
Q 047874 412 NVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMIL 491 (941)
Q Consensus 412 ~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~ 491 (941)
..+.||.+.|+.+++. +.|.+..... . .... .+ .++. . . .+.+|+++.+.
T Consensus 72 -----------~~s~hp~~~a~~~~~~-~~g~~~~~~~-~---~~~~-----~G-~~~~--~---~---~~~~g~~~~~~ 121 (287)
T 3a1c_A 72 -----------RRSEHPIAEAIVKKAL-EHGIELGEPE-K---VEVI-----AG-EGVV--A---D---GILVGNKRLME 121 (287)
T ss_dssp -----------TTCCSHHHHHHHHHHH-HTTCCCCCCS-C---EEEE-----TT-TEEE--E---T---TEEEECHHHHH
T ss_pred -----------hcCCCHHHHHHHHHHH-hcCCCccccc-c---ceee-----cC-CCeE--E---E---EEEECCHHHHH
Confidence 1257999999999887 6666432111 0 1111 01 1111 1 1 12346655443
Q ss_pred hhcccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHH
Q 047874 492 VMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRA 571 (941)
Q Consensus 492 ~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~ 571 (941)
+.+.. .+ +.+.+..+.+..+|.+++++++ +..+.+.+..+++++|++.+
T Consensus 122 ~~~~~----------~~----~~~~~~~~~~~~~g~~~i~~~~-----------------d~~~~~~~~~~~~~~~g~~~ 170 (287)
T 3a1c_A 122 DFGVA----------VS----NEVELALEKLEREAKTAVIVAR-----------------NGRVEGIIAVSDTLKESAKP 170 (287)
T ss_dssp HTTCC----------CC----HHHHHHHHHHHHTTCEEEEEEE-----------------TTEEEEEEEEECCBCTTHHH
T ss_pred hcCCC----------cc----HHHHHHHHHHHhCCCeEEEEEE-----------------CCEEEEEEEeccccchhHHH
Confidence 21110 11 1234556677889999998886 34688999999999999999
Q ss_pred HHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHH
Q 047874 572 AVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLM 651 (941)
Q Consensus 572 ~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 651 (941)
+++.|+++|+++.++||++...+..+++.+|+.. .|....|..|...
T Consensus 171 ~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------------------------------~f~~i~~~~K~~~ 217 (287)
T 3a1c_A 171 AVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------------VIAEVLPHQKSEE 217 (287)
T ss_dssp HHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------------EECSCCTTCHHHH
T ss_pred HHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce---------------------------------eeeecChHHHHHH
Confidence 9999999999999999999999999999999864 5666778999999
Q ss_pred HHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHH
Q 047874 652 VQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQ 723 (941)
Q Consensus 652 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~ 723 (941)
++.++.. +.|+|+||+.||++|.+.||++++++ ++.+..++.+|+++.++++..+.++++.+|+++++|+
T Consensus 218 ~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 218 VKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 9999888 89999999999999999999999998 7777677889999988899999999999999999875
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.91 E-value=6.9e-25 Score=198.24 Aligned_cols=109 Identities=27% Similarity=0.420 Sum_probs=99.2
Q ss_pred HHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCceecCCCCCeEee
Q 047874 127 FQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDRVEVDEKNPFLLS 206 (941)
Q Consensus 127 ~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~~l~a 206 (941)
.++|.++ .+.+++|+|||++++|++++|+|||+|.+++||+|||||++++|++ .||||+|||||.|+.|.++ +.+|+
T Consensus 3 l~~L~~l-~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~-~vdeS~LTGEs~pv~k~~g-~~v~a 79 (113)
T 2hc8_A 3 IKKLVGL-QAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKG-DEVFG 79 (113)
T ss_dssp HHHHHHH-SCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTT-CEECT
T ss_pred HHHHhcC-CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceE-EEEccccCCCCccEEECCC-CEEEe
Confidence 3445433 5678999999999999999999999999999999999999999986 9999999999999999986 46999
Q ss_pred ccEEeeeeEEEEEEEEcccChhhHHHHhhccc
Q 047874 207 GTKVTAGYGFMLVTSVGMSTAWGEMMSSISHE 238 (941)
Q Consensus 207 Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 238 (941)
||.+.+|.+.++|+++|.+|.+|+|.+.+.++
T Consensus 80 Gt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 80 ATINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp TCEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CCEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 99999999999999999999999999887643
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.8e-23 Score=222.97 Aligned_cols=276 Identities=26% Similarity=0.384 Sum_probs=195.4
Q ss_pred ccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCcc
Q 047874 344 VRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSE 423 (941)
Q Consensus 344 vk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 423 (941)
+|+++++|.+++++.|+||++||||.|+++|.++...+. . .......+.. +. .
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~--~--------~~~~~~~~~~---~~--------------~ 53 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH--S--------EDELLQIAAS---LE--------------A 53 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS--C--------HHHHHHHHHH---HH--------------T
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC--C--------HHHHHHHHHH---hh--------------c
Confidence 588999999999999999999999999999999887544 1 1122222211 11 1
Q ss_pred ccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCe
Q 047874 424 ITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGT 503 (941)
Q Consensus 424 ~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~ 503 (941)
.+.++...++.+.+. +.|....... .....+ .. .....+ ++..+ ..|.++.+.......
T Consensus 54 ~s~~~~~~a~~~~~~-~~g~~~~~~~----~~~~~~---g~-~~~~~~---~~~~~---~~~~~~~~~~~~~~~------ 112 (280)
T 3skx_A 54 RSEHPIAAAIVEEAE-KRGFGLTEVE----EFRAIP---GK-GVEGIV---NGRRY---MVVSPGYIRELGIKT------ 112 (280)
T ss_dssp TCCSHHHHHHHHHHH-HTTCCCCCCE----EEEEET---TT-EEEEEE---TTEEE---EEECHHHHHHTTCCC------
T ss_pred cCCCHHHHHHHHHHH-hcCCCCCCcc----ceeecC---CC-EEEEEE---CCEEE---EEecHHHHHHcCCCc------
Confidence 134788888888877 6665432211 111111 11 111111 22222 236666654433211
Q ss_pred EeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHHHHHHhcCCeE
Q 047874 504 IRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNV 583 (941)
Q Consensus 504 ~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v 583 (941)
+ ....++..++.+.+.+++ +..++|.+.+.++++|++.++++.|+++|+++
T Consensus 113 ----~--------~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~ 163 (280)
T 3skx_A 113 ----D--------ESVEKLKQQGKTVVFILK-----------------NGEVSGVIALADRIRPESREAISKLKAIGIKC 163 (280)
T ss_dssp ----C--------TTHHHHHTTTCEEEEEEE-----------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEE
T ss_pred ----h--------HHHHHHHhCCCeEEEEEE-----------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEE
Confidence 0 123345566766665554 44688999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEE
Q 047874 584 KMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVA 663 (941)
Q Consensus 584 ~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~ 663 (941)
.++||++...+..+++.+|+.. .|..+.|.+|...++.+.+.. .++
T Consensus 164 ~i~T~~~~~~~~~~~~~~gl~~---------------------------------~f~~~~~~~k~~~~k~~~~~~-~~~ 209 (280)
T 3skx_A 164 MMLTGDNRFVAKWVAEELGLDD---------------------------------YFAEVLPHEKAEKVKEVQQKY-VTA 209 (280)
T ss_dssp EEECSSCHHHHHHHHHHHTCSE---------------------------------EECSCCGGGHHHHHHHHHTTS-CEE
T ss_pred EEEeCCCHHHHHHHHHHcCChh---------------------------------HhHhcCHHHHHHHHHHHHhcC-CEE
Confidence 9999999999999999999864 677788999999999998876 679
Q ss_pred EEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 664 VTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLT 731 (941)
Q Consensus 664 ~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~ 731 (941)
|+||+.||++|++.||+||+|| ++.+..++.||+++..++++++.++++.+|++++++++++.|++.
T Consensus 210 ~vGD~~nDi~~~~~Ag~~va~~-~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 210 MVGDGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp EEECTTTTHHHHHHSSEEEECS-CCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred EEeCCchhHHHHHhCCceEEec-CCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 899999999999999999999999999999999999999999864
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.4e-24 Score=196.66 Aligned_cols=115 Identities=23% Similarity=0.362 Sum_probs=101.3
Q ss_pred HHHHHHHHHHhcccCCCeEEEEECCE------EeeeecCCcccCcEEEEcCCCeeecceEEEecceEEEeeccCCCCCCc
Q 047874 121 FKQSRQFQALANESSDIRVEVVRDGR------RRGLSIFDVVVGEVVCLKTGDQIPADGLFLNGHSLKVDESSMTGESDR 194 (941)
Q Consensus 121 ~~~~~~~~~l~~~~~~~~~~V~R~g~------~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~g~~l~Vdes~LTGEs~p 194 (941)
++..+..++|.++ .+..++|+|+|+ ++.|++++|+|||+|.|++||+|||||+|++|++ .||||+|||||.|
T Consensus 3 ~ka~~~l~~L~~l-~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~p 80 (124)
T 2kij_A 3 FTMSEALAKLISL-QATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMP 80 (124)
T ss_dssp ---CCHHHHHHHT-CCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSSC
T ss_pred HHHHHHHHHHhcc-CCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCcc
Confidence 4555667777654 568999999764 6889999999999999999999999999999998 8999999999999
Q ss_pred eecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhccc
Q 047874 195 VEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHE 238 (941)
Q Consensus 195 v~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 238 (941)
+.|.++ +.+|+||.+.+|.+.++|++||.+|.+|+|.+.+.++
T Consensus 81 v~k~~g-~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 81 VAKKPG-STVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EECCTT-EEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EEeCCC-CEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 999986 5699999999999999999999999999999987653
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-20 Score=204.52 Aligned_cols=148 Identities=16% Similarity=0.104 Sum_probs=113.3
Q ss_pred ccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEE
Q 047874 561 LKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 561 ~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 640 (941)
..+++||+++++++.|+++|++++|+||+...++.++|+++|+..++..........+...+.... ..+.+..+
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~------~~~~i~~~ 211 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGF------KGELIHVF 211 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEE------CSSCCCTT
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEec------cccccchh
Confidence 357999999999999999999999999999999999999999976432110000001110000000 00112245
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHH---HhCCccEEecC------CCcHHHHhccCEEeccCCchHHHHH
Q 047874 641 ARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPAL---RAADIGLSMGI------QGTEVAKESSDIVIMDDNFSSVVTV 711 (941)
Q Consensus 641 ~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l---~~A~vgIam~~------~~~~~a~~~ad~vl~~~~~~~i~~~ 711 (941)
++..|.+|...+..+++.++.|+|+|||.||+||+ ..||+|||||. ++.+.+++++|+|+.++++..++.+
T Consensus 212 ~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~ 291 (297)
T 4fe3_A 212 NKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNS 291 (297)
T ss_dssp CHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHH
T ss_pred hcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHH
Confidence 66778899999999999999999999999999995 49999999994 5677889999999999999999988
Q ss_pred HHH
Q 047874 712 LRW 714 (941)
Q Consensus 712 i~~ 714 (941)
|.+
T Consensus 292 il~ 294 (297)
T 4fe3_A 292 ILQ 294 (297)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-18 Score=169.14 Aligned_cols=134 Identities=22% Similarity=0.307 Sum_probs=110.2
Q ss_pred cCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeE
Q 047874 425 TGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTI 504 (941)
Q Consensus 425 ~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~ 504 (941)
.+||+|.|+++++. ..+ ....+..++++.++||+|+||||+++++..+ +++.+++|||||.|+++|+.+. .+|..
T Consensus 32 ~~n~~d~Ail~~~~-~~~--~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~-g~~~l~~KGApE~IL~~C~~~~-~~g~~ 106 (170)
T 3gwi_A 32 LKNLLDTAVLEGTD-EES--ARSLASRWQKIDEIPFDFERRRMSVVVAENT-EHHQLVCKGALQEILNVCSQVR-HNGEI 106 (170)
T ss_dssp CCCHHHHHHHHTSC-HHH--HHHHHHHSEEEEEECCCTTTCEEEEEEESSS-SEEEEEEEECHHHHHTTEEEEE-ETTEE
T ss_pred CCChHHHHHHHHHH-hcC--hhhhhhcCeEEeeEecCcccCcEEEEEEeCC-CCEEEEEcCCcHHHHHHhHHHh-cCCCc
Confidence 46999999998764 211 1123456889999999999999999997643 4578999999999999999875 47888
Q ss_pred eeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCC
Q 047874 505 RILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDP 564 (941)
Q Consensus 505 ~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~ 564 (941)
.+++++.++.+.+..++++++|+||+++|||.++...... ....|+||+|+|+++|-|.
T Consensus 107 ~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~-~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 107 VPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDY-QRADESDLILEGYIAFLDH 165 (170)
T ss_dssp EECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCC-CGGGSCSEEEEEEEEEEC-
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCcccc-CccccCCcEEEehhccccc
Confidence 9999999999999999999999999999999987654322 2346999999999999885
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.41 E-value=1.8e-13 Score=137.63 Aligned_cols=127 Identities=15% Similarity=0.216 Sum_probs=107.0
Q ss_pred HHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHH
Q 047874 572 AVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLM 651 (941)
Q Consensus 572 ~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 651 (941)
+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|.+.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------------~f~~~--~~K~~~ 98 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------------LFQGR--EDKLVV 98 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE---------------------------------EECSC--SCHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH---------------------------------HhcCc--CChHHH
Confidence 9999999999999999999999999999999964 33322 556676
Q ss_pred HHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCC----chHHHHHHHHHHHHHHHHH
Q 047874 652 VQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDN----FSSVVTVLRWGRCVYNNIQ 723 (941)
Q Consensus 652 v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~----~~~i~~~i~~gR~~~~~i~ 723 (941)
++.+.+. .+.++++||+.||++|++.||++++++ ++.+.+++.||+++.+++ +..+.+.+..+|..+++++
T Consensus 99 ~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~ 177 (189)
T 3mn1_A 99 LDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAH 177 (189)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHH
Confidence 6666554 578999999999999999999999999 899999999999999775 5567778888999999999
Q ss_pred HHHHHHHHHHH
Q 047874 724 KFLQFQLTVNV 734 (941)
Q Consensus 724 ~~i~~~l~~n~ 734 (941)
+++.|.+.+|-
T Consensus 178 ~~~~~~~~~~~ 188 (189)
T 3mn1_A 178 SVYLEGHHHHH 188 (189)
T ss_dssp HTTSTTC----
T ss_pred HHHhccccccC
Confidence 99999998873
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.30 E-value=8.3e-12 Score=129.36 Aligned_cols=151 Identities=18% Similarity=0.176 Sum_probs=108.9
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccccee--cchhc-cc--------------
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVI--EGVQF-RS-------------- 624 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~--~g~~~-~~-------------- 624 (941)
+.++.+++.++|++|+++|++++++|||+...+..+++++|+..+-. ..+...+. +|+.+ ..
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I-~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~ 98 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVF-GENGGIMFDNDGSIKKFFSNEGTNKFLEEMSK 98 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEE-EGGGTEEECTTSCEEESSCSHHHHHHHHHHTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEE-EeCCcEEEeCCCCEEEEeccHHHHHHHHHHHH
Confidence 34678899999999999999999999999999999999999864211 01111111 12211 00
Q ss_pred -----------------------CCHHHHHHhhc--CceEE-----EecCH--HHHHHHHHHHHhC----CCEEEEEcCC
Q 047874 625 -----------------------LSAEERIAKIE--SIRVM-----ARSSP--LDKLLMVQSLKQK----GHVVAVTGDG 668 (941)
Q Consensus 625 -----------------------~~~~~~~~~~~--~~~v~-----~~~~p--~~K~~iv~~l~~~----g~~v~~iGDg 668 (941)
...++...... ...+. ....| .+|...++.+.+. .+.|+++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~ 178 (227)
T 1l6r_A 99 RTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDS 178 (227)
T ss_dssp TSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCS
T ss_pred HhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCc
Confidence 01111111111 22222 12224 6899988888764 3579999999
Q ss_pred ccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 669 TNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 669 ~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.||.+|++.|++|++|+ ++.+.+++.||+++.+++.+++.++|++
T Consensus 179 ~nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 179 NNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp GGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred HHhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHHH
Confidence 99999999999999999 8999999999999999999999998864
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.28 E-value=3.9e-12 Score=140.43 Aligned_cols=155 Identities=15% Similarity=0.167 Sum_probs=109.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC-CCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVD-LNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
++.+++.+.++.|+++|+++.++||+....+..+++++|+...... +......++|...... ...+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~-------------~~~k 244 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEV-------------VSAQ 244 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCC-------------CCHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccc-------------cChh
Confidence 6899999999999999999999999999999999999998631000 0000001111100000 0111
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHH
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNI 722 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i 722 (941)
..|+....+.+.++-..+.|+++|||.||++|++.||+|++| ++.+..++.||+++..+++.++..+++.......++
T Consensus 245 pk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~ 322 (335)
T 3n28_A 245 TKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKL 322 (335)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCC
T ss_pred hhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhh
Confidence 223333344444444457899999999999999999999999 688999999999999999999999999998888899
Q ss_pred HHHHHHHHHHH
Q 047874 723 QKFLQFQLTVN 733 (941)
Q Consensus 723 ~~~i~~~l~~n 733 (941)
++++.|.+.||
T Consensus 323 ~~~~~~~~~~~ 333 (335)
T 3n28_A 323 SWKSKEGHHHH 333 (335)
T ss_dssp CCC--------
T ss_pred ccccccccccc
Confidence 99999999887
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.9e-11 Score=121.87 Aligned_cols=131 Identities=17% Similarity=0.190 Sum_probs=105.2
Q ss_pred CcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCH
Q 047874 566 RPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSP 645 (941)
Q Consensus 566 ~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p 645 (941)
.+++.++|+.|+++|++++++||++...+..+++++|+.. .|...
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~---------------------------------~~~~~-- 81 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL---------------------------------FFLGK-- 81 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------EEESC--
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------eecCC--
Confidence 4566799999999999999999999999999999999864 23222
Q ss_pred HHHHHHHHHHHhC-C---CEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHH-HH---HHHHHH
Q 047874 646 LDKLLMVQSLKQK-G---HVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVV-TV---LRWGRC 717 (941)
Q Consensus 646 ~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~-~~---i~~gR~ 717 (941)
..|...++.+.+. | +.|+++||+.||++|++.|+++++++ ++.+.+++.||+++.+++..+++ ++ +...|.
T Consensus 82 k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~ 160 (180)
T 1k1e_A 82 LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQG 160 (180)
T ss_dssp SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcC
Confidence 3455655554433 3 68999999999999999999999998 89999999999999988777766 33 444666
Q ss_pred HHHHHHHHHHHHHHH
Q 047874 718 VYNNIQKFLQFQLTV 732 (941)
Q Consensus 718 ~~~~i~~~i~~~l~~ 732 (941)
.+.+++.++.|...-
T Consensus 161 ~~~~~~~~~~~~~~~ 175 (180)
T 1k1e_A 161 KSSVFDTAQGFLKSV 175 (180)
T ss_dssp CTHHHHCHHHHHHHG
T ss_pred chhhhhhccchhhhh
Confidence 788888777776653
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.18 E-value=3.3e-11 Score=121.24 Aligned_cols=103 Identities=18% Similarity=0.232 Sum_probs=86.7
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHH
Q 047874 571 AAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLL 650 (941)
Q Consensus 571 ~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 650 (941)
.+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|..
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------------~~~~~--k~k~~ 103 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------------IYQGQ--DDKVQ 103 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE---------------------------------EECSC--SSHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE---------------------------------EeeCC--CCcHH
Confidence 45999999999999999999999999999999964 33333 34555
Q ss_pred HHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHH
Q 047874 651 MVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVV 709 (941)
Q Consensus 651 iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~ 709 (941)
.++.+.+. .+.|+++||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++..+++
T Consensus 104 ~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~~ 165 (195)
T 3n07_A 104 AYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGAV 165 (195)
T ss_dssp HHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTHH
T ss_pred HHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCHH
Confidence 55555443 568999999999999999999999999 89999999999999988777644
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.9e-11 Score=118.26 Aligned_cols=112 Identities=13% Similarity=0.170 Sum_probs=90.9
Q ss_pred EEEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHH--HcCCCCCCCCCCcccceecchhcccCCHHHHH
Q 047874 554 TLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAI--ECGILNPDVDLNKDEAVIEGVQFRSLSAEERI 631 (941)
Q Consensus 554 ~~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~--~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 631 (941)
..++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ .+|+.
T Consensus 32 ~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~--------------------------- 76 (168)
T 3ewi_A 32 KEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK--------------------------- 76 (168)
T ss_dssp CCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC---------------------------
T ss_pred CEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE---------------------------
Confidence 45666777766 4899999999999999999 67788888 55553
Q ss_pred HhhcCceEEEecCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchH
Q 047874 632 AKIESIRVMARSSPLDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSS 707 (941)
Q Consensus 632 ~~~~~~~v~~~~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~ 707 (941)
++. .+.+|...++.+.+. .+.|+++||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++-++
T Consensus 77 -------~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~~~~~~G 146 (168)
T 3ewi_A 77 -------TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICKCSGGRG 146 (168)
T ss_dssp -------EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECSSCTTTT
T ss_pred -------EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeCCCCCcc
Confidence 121 234677777777654 468999999999999999999999998 999999999999999888777
Q ss_pred HHH
Q 047874 708 VVT 710 (941)
Q Consensus 708 i~~ 710 (941)
++.
T Consensus 147 ~~~ 149 (168)
T 3ewi_A 147 AIR 149 (168)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.16 E-value=1.5e-10 Score=124.04 Aligned_cols=67 Identities=27% Similarity=0.456 Sum_probs=60.7
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
+|...++.+.+. .+.|+++||+.||.+|++.|++||||| |+.+.+|+.||+++.+++.++++++|++
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 788887777654 457999999999999999999999999 9999999999999999999999998865
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.16 E-value=6.7e-11 Score=118.93 Aligned_cols=122 Identities=12% Similarity=0.090 Sum_probs=98.6
Q ss_pred HHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe--cCHHHHH
Q 047874 572 AVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR--SSPLDKL 649 (941)
Q Consensus 572 ~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~--~~p~~K~ 649 (941)
+|+.|+++|+++.++||++...+..+++++|+.. +|.. ..|+-..
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~---------------------------------~~~~~kpk~~~~~ 100 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH---------------------------------YYKGQVDKRSAYQ 100 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE---------------------------------EECSCSSCHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc---------------------------------ceeCCCChHHHHH
Confidence 4999999999999999999999999999999974 2332 2455556
Q ss_pred HHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchH----HHHHHHHHHHHHHHHHHH
Q 047874 650 LMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSS----VVTVLRWGRCVYNNIQKF 725 (941)
Q Consensus 650 ~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~----i~~~i~~gR~~~~~i~~~ 725 (941)
.+++.++-..+.++++||+.||.+|++.|+++++|+ ++.+..++.||+++.+++..+ +.+.+...|..+.++.+.
T Consensus 101 ~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~ 179 (191)
T 3n1u_A 101 HLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITG 179 (191)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHH
Confidence 666666655678999999999999999999999999 899999999999999888665 444555566666665555
Q ss_pred HH
Q 047874 726 LQ 727 (941)
Q Consensus 726 i~ 727 (941)
+.
T Consensus 180 ~~ 181 (191)
T 3n1u_A 180 YL 181 (191)
T ss_dssp HH
T ss_pred HH
Confidence 44
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.6e-10 Score=124.21 Aligned_cols=151 Identities=20% Similarity=0.156 Sum_probs=104.6
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCC------------C------C---------C----
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDV------------D------L---------N---- 611 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~------------~------~---------~---- 611 (941)
..+.+.+.++|++++++|++++++|||+...+..+.+.+|+...-. . + .
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~~ 116 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRN 116 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHhh
Confidence 4578899999999999999999999999999999999999863100 0 0 0
Q ss_pred cccc---eecchh-------------------------ccc-------------CCHHH-------HHHhhc-CceEE--
Q 047874 612 KDEA---VIEGVQ-------------------------FRS-------------LSAEE-------RIAKIE-SIRVM-- 640 (941)
Q Consensus 612 ~~~~---~~~g~~-------------------------~~~-------------~~~~~-------~~~~~~-~~~v~-- 640 (941)
.... +..+.. +.. ...+. +.+... ...+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 196 (285)
T 3pgv_A 117 DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFS 196 (285)
T ss_dssp CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEES
T ss_pred cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 0000 000000 000 11111 111111 11111
Q ss_pred ----EecCH--HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCE--EeccCCchHH
Q 047874 641 ----ARSSP--LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDI--VIMDDNFSSV 708 (941)
Q Consensus 641 ----~~~~p--~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~--vl~~~~~~~i 708 (941)
....| .+|...++.+.+. .+.|+++||+.||.+|++.|++||||| |+.+.+|+.||+ ++.+++.++|
T Consensus 197 ~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGv 275 (285)
T 3pgv_A 197 TLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAV 275 (285)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHH
T ss_pred CCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchH
Confidence 12222 4688888887664 357999999999999999999999999 999999999984 7889999999
Q ss_pred HHHHHH
Q 047874 709 VTVLRW 714 (941)
Q Consensus 709 ~~~i~~ 714 (941)
+++|++
T Consensus 276 a~~i~~ 281 (285)
T 3pgv_A 276 PRYLRK 281 (285)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998864
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.15 E-value=1.8e-10 Score=124.20 Aligned_cols=68 Identities=19% Similarity=0.269 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 646 LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 646 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.+|...++.+.+. .+.|+++||+.||.+|++.|++|+||+ |+.+.+++.||+++.+++.++++++|++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 4688888877664 357999999999999999999999999 9999999999999999999999999875
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.3e-10 Score=113.41 Aligned_cols=105 Identities=14% Similarity=0.187 Sum_probs=88.7
Q ss_pred HHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHH
Q 047874 572 AVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLM 651 (941)
Q Consensus 572 ~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 651 (941)
+++.|+++|+++.++||++...+..+++.+|+. ++... ..|...
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------------~~~~~--~~k~~~ 90 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------------VLHGI--DRKDLA 90 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC----------------------------------EEESC--SCHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe----------------------------------eEeCC--CChHHH
Confidence 899999999999999999999999999999985 12222 456666
Q ss_pred HHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 652 VQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 652 v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
++.+.+. .+.++++||+.||.+|++.|+++++++ ++.+..++.||+++.+++..+++..+.
T Consensus 91 l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~ 155 (176)
T 3mmz_A 91 LKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIREIA 155 (176)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHHHH
Confidence 6665544 468999999999999999999999999 899999999999999888777665543
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.11 E-value=1.3e-10 Score=118.50 Aligned_cols=100 Identities=17% Similarity=0.213 Sum_probs=86.9
Q ss_pred HHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHH
Q 047874 572 AVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLM 651 (941)
Q Consensus 572 ~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 651 (941)
+++.|+++|+++.++||++...+..+++++|+.. +|... ..|...
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~---------------------------------~f~~~--k~K~~~ 128 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH---------------------------------LYQGQ--SDKLVA 128 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------------EECSC--SSHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch---------------------------------hhccc--CChHHH
Confidence 9999999999999999999999999999999964 34333 556777
Q ss_pred HHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchH
Q 047874 652 VQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSS 707 (941)
Q Consensus 652 v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~ 707 (941)
++.+.+. .+.|+++||+.||.+|+++|+++++++ ++.+.+++.||+++.+++-.+
T Consensus 129 l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 129 YHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTT
T ss_pred HHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCCCc
Confidence 7666554 678999999999999999999999999 889999999999999876555
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.8e-10 Score=123.76 Aligned_cols=68 Identities=19% Similarity=0.200 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 646 LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 646 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.+|...++.+.+. .+.|+++||+.||.+|++.|++||||| |+.+.+|+.||+++.+++.+++.++|++
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~~ 281 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLKS 281 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHHH
Confidence 3688888887764 357999999999999999999999999 9999999999999999999999998864
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.10 E-value=1.3e-10 Score=124.57 Aligned_cols=67 Identities=24% Similarity=0.346 Sum_probs=49.1
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
+|...++.+.+. .+.|+++||+.||.+|++.|++||||| |+.+..|+.||+++.+++.++|+++|++
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAENGVAAAIRK 267 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------CHHHHHC-
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCccHHHHHHHH
Confidence 588888777664 357999999999999999999999999 9999999999999999999999998753
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.05 E-value=4.5e-10 Score=119.53 Aligned_cols=68 Identities=28% Similarity=0.385 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 646 LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 646 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.+|...++.+.+. .+.|+++||+.||.+|++.|++||||+ |+.+.+|+.||+++.+++.++++++|++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 4688888777664 457999999999999999999999999 9999999999999999999999999864
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.05 E-value=3e-10 Score=121.30 Aligned_cols=68 Identities=19% Similarity=0.268 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 646 LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 646 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.+|...++.+.+. .+.|+++||+.||.+|++.|++||||| |+.+.+++.||+++.+++.++++++|++
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 3688777777654 567999999999999999999999999 9999999999999999999999999864
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.05 E-value=8.8e-10 Score=116.58 Aligned_cols=67 Identities=25% Similarity=0.270 Sum_probs=59.9
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
+|...++.+.+. .+.|+++||+.||.+|++.|++||||| |+.+.+|+.||+++.+++.++++++|++
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 577777777653 457999999999999999999999999 9999999999999999999999998864
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.98 E-value=5.4e-10 Score=121.35 Aligned_cols=69 Identities=23% Similarity=0.295 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 645 PLDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 645 p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
+.+|...++.+.+. .+.|+++||+.||.+|++.|++||||+ |+.+.+|+.||+++.+++.++++++|++
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 298 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVIDN 298 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHHH
Confidence 35788888887664 357999999999999999999999999 9999999999999999999999999874
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=1.3e-09 Score=106.53 Aligned_cols=105 Identities=21% Similarity=0.201 Sum_probs=85.7
Q ss_pred HHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHH
Q 047874 572 AVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLM 651 (941)
Q Consensus 572 ~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 651 (941)
+++.|+++|+++.++||++...+..+++++|+.. .+... ..|...
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------~~~~~--kpk~~~ 83 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------LFQGV--VDKLSA 83 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE---------------------------------EECSC--SCHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE---------------------------------eeccc--CChHHH
Confidence 8999999999999999999999999999999864 23222 234444
Q ss_pred HHH----HHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchH-HHHHH
Q 047874 652 VQS----LKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSS-VVTVL 712 (941)
Q Consensus 652 v~~----l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~-i~~~i 712 (941)
++. +.-..+.|+++||+.||.+|++.||++++++ ++.+..++.||+++.+++..+ +.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~ 148 (164)
T 3e8m_A 84 AEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFV 148 (164)
T ss_dssp HHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHH
Confidence 433 3333568999999999999999999999998 899999999999999988666 54444
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.93 E-value=4.3e-09 Score=109.27 Aligned_cols=150 Identities=20% Similarity=0.242 Sum_probs=104.7
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceec-c----------------------
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIE-G---------------------- 619 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~-g---------------------- 619 (941)
..+.+.+.+++++++++|++++++|||+...+..+.+.+|+..+-.. .+...+.. |
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~-~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~ 97 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVA-EDGGAISYKKKRIFLASMDEEWILWNEIRKRF 97 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEE-GGGTEEEETTEEEESCCCSHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEE-eCCcEEEeCCEEEEeccHHHHHHHHHHHHHhC
Confidence 35678899999999999999999999999999999999998642110 00000000 0
Q ss_pred --hhc--------------c-cCCHHHHHHhhc----CceEE-----EecC--HHHHHHHHHHHHhC----CCEEEEEcC
Q 047874 620 --VQF--------------R-SLSAEERIAKIE----SIRVM-----ARSS--PLDKLLMVQSLKQK----GHVVAVTGD 667 (941)
Q Consensus 620 --~~~--------------~-~~~~~~~~~~~~----~~~v~-----~~~~--p~~K~~iv~~l~~~----g~~v~~iGD 667 (941)
..+ . ....+....... ...+. .... ...|...++.+.++ .+.|+++||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD 177 (231)
T 1wr8_A 98 PNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGD 177 (231)
T ss_dssp TTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEEC
T ss_pred CCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECC
Confidence 000 0 002222222111 12232 1222 24688887777653 357999999
Q ss_pred CccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 668 GTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 668 g~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
+.||.+|++.|+++++|+ ++.+..++.||+++.+++.+++.++|++
T Consensus 178 ~~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 178 GENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp SGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 999999999999999999 8888889999999999889999988864
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.89 E-value=1e-08 Score=109.87 Aligned_cols=67 Identities=21% Similarity=0.244 Sum_probs=59.9
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
+|...++.+.+. .+.++++||+.||.+|++.|++||+|+ ++.+..++.||+++.+++.+++.++|++
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~~ 268 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIEK 268 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHHH
Confidence 788888887654 357999999999999999999999999 8999999999999999999999988864
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.86 E-value=3.4e-09 Score=108.40 Aligned_cols=134 Identities=16% Similarity=0.093 Sum_probs=96.7
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
-++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+... ...++...+- .....+...
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~------f~~~~~~~~~-----------~~~~~~~~~ 136 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAA------FSNTLIVEND-----------ALNGLVTGH 136 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEE------EEEEEEEETT-----------EEEEEEEES
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchh------ccceeEEeCC-----------EEEeeeccC
Confidence 45789999999999999999999999999999999999998641 0111100000 000000000
Q ss_pred -cCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHH
Q 047874 643 -SSPLDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWG 715 (941)
Q Consensus 643 -~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 715 (941)
.....|.++++.+.+. .+.++++||+.||.+|++.||++++| ++.+..++.||+++.++++.++..+++.-
T Consensus 137 ~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~~ 212 (217)
T 3m1y_A 137 MMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEGH 212 (217)
T ss_dssp CCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC----
T ss_pred CCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhccc
Confidence 1235566666555443 46799999999999999999999999 68888999999999999999998777653
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.85 E-value=6.7e-09 Score=117.88 Aligned_cols=140 Identities=19% Similarity=0.254 Sum_probs=107.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDV-DLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+..... .+......++|..... -
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~-----------------v 318 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGP-----------------I 318 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSS-----------------C
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccC-----------------C
Confidence 789999999999999999999999999999999999999963100 0000001111111000 1
Q ss_pred cCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHH
Q 047874 643 SSPLDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCV 718 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~ 718 (941)
..+..|.++++.+.++ .+.++++||+.||.+|++.||+|+++ ++.+..++.||+++..+++.++..++..+|.-
T Consensus 319 ~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 319 IDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 1256777777666553 36799999999999999999999999 57888999999999999999999999888776
Q ss_pred HHHH
Q 047874 719 YNNI 722 (941)
Q Consensus 719 ~~~i 722 (941)
+...
T Consensus 397 ~~~~ 400 (415)
T 3p96_A 397 IEAA 400 (415)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6543
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=5.4e-09 Score=106.21 Aligned_cols=128 Identities=18% Similarity=0.232 Sum_probs=90.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe-
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR- 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~- 642 (941)
++.++++++++.++++|+++.++||+....+..+.+.+|+.... ...+..... .. ...+...
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-----------~~-~~~~~~~~ 138 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAF-----ANRLIVKDG-----------KL-TGDVEGEV 138 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEE-----EEEEEEETT-----------EE-EEEEECSS
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEE-----EeeeEEECC-----------EE-cCCcccCc
Confidence 46789999999999999999999999998888888998874210 000000000 00 0001001
Q ss_pred cCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHH
Q 047874 643 SSPLDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVT 710 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~ 710 (941)
..+..|...+..+.+. .+.|+++||+.||.+|++.||++++|+ +.+..+..||+++.++++..+..
T Consensus 139 ~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp CSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred cCCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 2245777666655543 357999999999999999999999997 56677889999998877877654
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.82 E-value=3.5e-09 Score=116.39 Aligned_cols=151 Identities=15% Similarity=0.185 Sum_probs=101.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecch------------------hcccC
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGV------------------QFRSL 625 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~------------------~~~~~ 625 (941)
.+++++.++++.|++ |+++.++||+....+....+.+++... . . ...+... .+...
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~-~-~---~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 176 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGE-L-H---GTEVDFDSIAVPEGLREELLSIIDVIASLS 176 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSE-E-E---EEBCCGGGCCCCHHHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhh-h-c---ccccchhhhccccccceeEEecCHHHHhhh
Confidence 457899999999999 999999999987777777777776321 0 0 0000000 00000
Q ss_pred CHHHHHHhhcC-------ceEE---EecCHHHHHHHHHHHHhCC--CEEEEEcCCccCHHHHHhC----CccEEecCCCc
Q 047874 626 SAEERIAKIES-------IRVM---ARSSPLDKLLMVQSLKQKG--HVVAVTGDGTNDAPALRAA----DIGLSMGIQGT 689 (941)
Q Consensus 626 ~~~~~~~~~~~-------~~v~---~~~~p~~K~~iv~~l~~~g--~~v~~iGDg~ND~~~l~~A----~vgIam~~~~~ 689 (941)
..+++ +.+.+ ..+. --..+.+|...++.+.... +.|+++|||.||++|++.| |+|||| |+.
T Consensus 177 ~~~~l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~ 253 (332)
T 1y8a_A 177 GEELF-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGN 253 (332)
T ss_dssp HHHHH-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCC
T ss_pred hHHHH-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCC
Confidence 00111 11100 0000 1123567988888765432 4599999999999999999 999999 789
Q ss_pred HHHHhccCEEeccCCchHHHHHHH----HHHHHHHHHHH
Q 047874 690 EVAKESSDIVIMDDNFSSVVTVLR----WGRCVYNNIQK 724 (941)
Q Consensus 690 ~~a~~~ad~vl~~~~~~~i~~~i~----~gR~~~~~i~~ 724 (941)
+.+++.||+++.+++.+++.++|+ +||..+ ++-+
T Consensus 254 ~~lk~~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~ 291 (332)
T 1y8a_A 254 EYALKHADVVIISPTAMSEAKVIELFMERKERAF-EVLS 291 (332)
T ss_dssp HHHHTTCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGG
T ss_pred HHHHhhCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHH
Confidence 999999999999999988887764 466666 4443
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.7e-08 Score=98.23 Aligned_cols=110 Identities=9% Similarity=0.118 Sum_probs=88.8
Q ss_pred CcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec--
Q 047874 566 RPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS-- 643 (941)
Q Consensus 566 ~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~-- 643 (941)
.+++.++++.|+++|++++++||++...+..+.+++|+.. .|...
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------------------------------~~~~~kp 84 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE---------------------------------IYTGSYK 84 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------------EEECC--
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------------hccCCCC
Confidence 4678899999999999999999999999999999999863 22222
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVV 709 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~ 709 (941)
.|+--..+++.+.-..+.++++||+.||.+|.+.||+++++. ++.+..++.||+++.+.+..++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 85 KLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHH
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHH
Confidence 222222333433334567999999999999999999999998 78888888999999988888877
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=1.2e-08 Score=102.13 Aligned_cols=107 Identities=18% Similarity=0.242 Sum_probs=85.7
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHH
Q 047874 571 AAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLL 650 (941)
Q Consensus 571 ~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 650 (941)
.+++.|+++|++++++||++...+..+++++|+.. +|... ..|..
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------------~~~~~--kpk~~ 104 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------------LYQGQ--SNKLI 104 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------------EECSC--SCSHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce---------------------------------eecCC--CCCHH
Confidence 48999999999999999999999999999999863 22222 23444
Q ss_pred HHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHH-HHHH
Q 047874 651 MVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVV-TVLR 713 (941)
Q Consensus 651 iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~-~~i~ 713 (941)
.++.+.+. .+.++++||+.||.+|++.||++++++ ++.+..++.||+++.+.+..+++ ++++
T Consensus 105 ~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 105 AFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 44444332 368999999999999999999999998 77888888999999988777766 5554
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.78 E-value=2.6e-08 Score=107.70 Aligned_cols=67 Identities=24% Similarity=0.301 Sum_probs=59.8
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEec-cCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIM-DDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~-~~~~~~i~~~i~~ 714 (941)
+|...++.+.+. .+.|+++||+.||.+|++.|++||||+ ++.+..++.||+++. +++.++++++|++
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 788888887654 347999999999999999999999999 899999999999999 9999999988864
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.77 E-value=9.5e-09 Score=109.47 Aligned_cols=68 Identities=26% Similarity=0.351 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 646 LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 646 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
..|...++.+.+. .+.|+++||+.||.+|++.|++|++|+ |+.+..++.||+++.+++.+++.++|++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQA 261 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHHH
Confidence 4788888777654 357999999999999999999999999 8999999999999999999999988864
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.76 E-value=1.1e-08 Score=111.25 Aligned_cols=131 Identities=15% Similarity=0.222 Sum_probs=95.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC-CCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVD-LNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+...-.. ........+|..... -
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~-----------------~ 241 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLP-----------------I 241 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSS-----------------C
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecc-----------------c
Confidence 4789999999999999999999999999999999999999631000 000000000100000 0
Q ss_pred cCHHHHHHHHHHHHh----CCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 643 SSPLDKLLMVQSLKQ----KGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~----~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
..+..|.++++.+.+ ..+.++++||+.||++|++.||+|+++ ++.+..++.||.++..+++.++.++++
T Consensus 242 ~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~--~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW--KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp CCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 133556666555543 246899999999999999999999999 477888899999999899999887664
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=2.4e-08 Score=105.49 Aligned_cols=65 Identities=22% Similarity=0.256 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHhC-C-----CEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 646 LDKLLMVQSLKQK-G-----HVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 646 ~~K~~iv~~l~~~-g-----~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.+|...++.+.+. | +.|+++||+.||.+|++.|++|++|+ |+.+ . .+++++.+++.+++.+++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~~ 245 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVER 245 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHHH
Confidence 5788888888765 3 78999999999999999999999999 8888 4 78999999999999988864
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.73 E-value=8.3e-09 Score=107.61 Aligned_cols=143 Identities=13% Similarity=0.154 Sum_probs=94.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCC--CCC--------CC------C-----------------
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGIL--NPD--------VD------L----------------- 610 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~--~~~--------~~------~----------------- 610 (941)
.+.+.+.++|++|+++| +++++|||+...+..+.+.+ .. ..+ .. .
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 100 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD-INMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWV 100 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS-CEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc-hheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHH
Confidence 56789999999999999 99999999999998887765 21 000 00 0
Q ss_pred -Ccccceecchh---------cccCCHH---HHHHhh---cCceEE-----EecCH--HHHHHHHHHHHhCCCEEEEEcC
Q 047874 611 -NKDEAVIEGVQ---------FRSLSAE---ERIAKI---ESIRVM-----ARSSP--LDKLLMVQSLKQKGHVVAVTGD 667 (941)
Q Consensus 611 -~~~~~~~~g~~---------~~~~~~~---~~~~~~---~~~~v~-----~~~~p--~~K~~iv~~l~~~g~~v~~iGD 667 (941)
......+.+.. ......+ .+.+.+ ....+. ....| .+|...++.+.+.-. |+++||
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via~GD 179 (239)
T 1u02_A 101 SDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-AIIAGD 179 (239)
T ss_dssp HHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-EEEEES
T ss_pred hhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEEEeC
Confidence 00000010000 0000111 111111 122221 12223 379999999987743 999999
Q ss_pred CccCHHHHHhC--CccEEecCCCcHHHHhccCEEecc-CCchHHHHHHHH
Q 047874 668 GTNDAPALRAA--DIGLSMGIQGTEVAKESSDIVIMD-DNFSSVVTVLRW 714 (941)
Q Consensus 668 g~ND~~~l~~A--~vgIam~~~~~~~a~~~ad~vl~~-~~~~~i~~~i~~ 714 (941)
+.||.+||+.| ++||||| |+ ++.||+++.+ ++.+++.++|++
T Consensus 180 ~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~~ 224 (239)
T 1u02_A 180 DATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIEM 224 (239)
T ss_dssp SHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHHH
T ss_pred CCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHHH
Confidence 99999999999 9999999 77 6789999988 778899988864
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.72 E-value=3.6e-08 Score=104.78 Aligned_cols=66 Identities=33% Similarity=0.410 Sum_probs=58.9
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
+|...++.+.+. .+.|+++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++.+++.++|+
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 788887777653 357999999999999999999999999 899999999999999999999998875
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.71 E-value=3.9e-08 Score=104.90 Aligned_cols=67 Identities=18% Similarity=0.112 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhC-----CCE--EEEEcCCccCHHHHHhCCccEEecCCCc---HHHHhc--cC-EEeccCCchHHHHHHH
Q 047874 647 DKLLMVQSLKQK-----GHV--VAVTGDGTNDAPALRAADIGLSMGIQGT---EVAKES--SD-IVIMDDNFSSVVTVLR 713 (941)
Q Consensus 647 ~K~~iv~~l~~~-----g~~--v~~iGDg~ND~~~l~~A~vgIam~~~~~---~~a~~~--ad-~vl~~~~~~~i~~~i~ 713 (941)
+|...++.+.+. .+. ++++||+.||.+|++.|++||||+ |+. +..++. || +++.+++.++++++|+
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CCC------------------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEec-CCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 576666665532 245 999999999999999999999999 887 555543 78 9999999999998886
Q ss_pred H
Q 047874 714 W 714 (941)
Q Consensus 714 ~ 714 (941)
+
T Consensus 268 ~ 268 (275)
T 1xvi_A 268 H 268 (275)
T ss_dssp -
T ss_pred H
Confidence 4
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=3.2e-08 Score=103.50 Aligned_cols=67 Identities=15% Similarity=0.128 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhc-------cCEEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKES-------SDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~-------ad~vl~~~~~~~i~~~i~~ 714 (941)
+|...++.+.+. .+.|+++||+.||.+|++.|++||+|| |+.+..++. ||+++.+++.++++++|++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~ 239 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHHH
Confidence 788888887764 357999999999999999999999999 899988885 8899999999999998864
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.70 E-value=7.4e-08 Score=103.48 Aligned_cols=67 Identities=27% Similarity=0.362 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
+|...++.+.+. .+.++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++.++++++|++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHHH
Confidence 566667666654 347999999999999999999999999 8999999999999999999999998864
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.63 E-value=1.8e-08 Score=101.45 Aligned_cols=119 Identities=23% Similarity=0.375 Sum_probs=90.2
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|++.|+++.++|+.+...+..+ +.+|+... . .........+ -....
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~----~~~~~~~~~~----------------~~~~~ 136 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-A----NRAIFEDGKF----------------QGIRL 136 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-E----EEEEEETTEE----------------EEEEC
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-e----eeEEeeCCce----------------ECCcC
Confidence 6889999999999999999999999988888777 87876421 0 0000000000 01344
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
.|..|...++.+ ..+.++++||+.||.+|++.||++++|+ ++.+ .||+++. ++..+.++++
T Consensus 137 ~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 137 RFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVG-REIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp CSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEES--SHHHHHHHHH
T ss_pred CccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEEc--cHHHHHHHHH
Confidence 567899988888 5678999999999999999999999999 6665 7999987 5666776664
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.60 E-value=8.4e-08 Score=99.43 Aligned_cols=129 Identities=27% Similarity=0.334 Sum_probs=95.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.... ...-
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~------f~~~~~~~~~~----------------~~kp 161 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTR------LTVIAGDDSVE----------------RGKP 161 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGT------CSEEECTTTSS----------------SCTT
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhh------eeeEEeCCCCC----------------CCCC
Confidence 3568999999999999999999999999999999999998542 12222222211 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc---cEEecCCCcHHHHh-ccCEEeccCCchHHHHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI---GLSMGIQGTEVAKE-SSDIVIMDDNFSSVVTVLRWGR 716 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v---gIam~~~~~~~a~~-~ad~vl~~~~~~~i~~~i~~gR 716 (941)
.|+--..+.+.+.-..+.|+++||+.||++|.+.||+ +|++|.+..+..++ .||+++. ++..+.++++.|+
T Consensus 162 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l~~~~ 236 (237)
T 4ex6_A 162 HPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVD--SFPAAVTAVLDGH 236 (237)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEES--SHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEEC--CHHHHHHHHHccC
Confidence 3344455556665556789999999999999999999 99998444355554 7999986 7889998888764
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=7e-08 Score=97.77 Aligned_cols=128 Identities=15% Similarity=0.109 Sum_probs=94.4
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ....++.+.. . ...-.
T Consensus 71 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----~~~~i~~~~~-~----------------~~kp~ 129 (205)
T 3m9l_A 71 PAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCF----AEADVLGRDE-A----------------PPKPH 129 (205)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGS----CGGGEECTTT-S----------------CCTTS
T ss_pred CCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhc----CcceEEeCCC-C----------------CCCCC
Confidence 4689999999999999999999999999999999999985310 0012222111 0 01112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGR 716 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR 716 (941)
|+--..+.+.+.-..+.++++||+.||..|.+.||+ +|+|+ ++.+..++.||+++. ++..+...++..|
T Consensus 130 ~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~--~~~el~~~~~~~~ 199 (205)
T 3m9l_A 130 PGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHAR--DCAQLRDLLSAEG 199 (205)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECS--SHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeC--CHHHHHHHHHhcc
Confidence 333344444444445689999999999999999999 99999 777777888999996 7888888876643
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.53 E-value=1.2e-07 Score=100.36 Aligned_cols=67 Identities=27% Similarity=0.345 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.|...++.+.++ .+.|+++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++.+++.+++++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~l~~ 257 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 257 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCCEEeccCchhhHHHHHHH
Confidence 677666666543 457999999999999999999999999 8999999999999998888999988763
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.53 E-value=4.4e-07 Score=91.87 Aligned_cols=129 Identities=14% Similarity=0.033 Sum_probs=94.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|+++ +++.++|+.....+..+.+.+|+...- ...+..+.... ....-.-
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f-----~~~~~~~~~~~-------------~~~~~~p 129 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLL-----CHKLEIDDSDR-------------VVGYQLR 129 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEE-----EEEEEECTTSC-------------EEEEECC
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCccee-----cceeEEcCCce-------------EEeeecC
Confidence 5789999999999999 999999999999999999999986410 01111111100 0000125
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
.|+.|...++.+....+.++++||+.||.+|.+.||+++++. +.+..++.++.++.-+++..+.++++
T Consensus 130 ~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp SSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES--CCHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred CCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEEC--CcHHHHHHHhhhccccchHHHHHHHH
Confidence 688999999999888899999999999999999999999985 34445554444432357888877664
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.49 E-value=2.7e-07 Score=93.95 Aligned_cols=131 Identities=15% Similarity=0.098 Sum_probs=88.9
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.+++.+.++.|+++|+++.++|+.....+..+.+.+|+...... ....+....... . .......+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-----------~-~~~~~~~~ 148 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIF--AVETIWNSDGSF-----------K-ELDNSNGA 148 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEE--EEEEEECTTSBE-----------E-EEECTTST
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEE--EeeeeecCCCce-----------e-ccCCCCCC
Confidence 679999999999999999999999999999999999998531100 000011000000 0 00111224
Q ss_pred HHHHHHHHHHH-HhCCCEEEEEcCCccCHHHHHh----CCccEEecCCCcHHHHhccCEEeccCCchHHHHHH
Q 047874 645 PLDKLLMVQSL-KQKGHVVAVTGDGTNDAPALRA----ADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 645 p~~K~~iv~~l-~~~g~~v~~iGDg~ND~~~l~~----A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
|..|.+.+... .-..+.++++||+.||.+|+++ +.++++++ ++.+..+..||+++. ++..+.+++
T Consensus 149 ~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~--~~~el~~~l 218 (219)
T 3kd3_A 149 CDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVAR--NVAELASLI 218 (219)
T ss_dssp TTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEES--SHHHHHHHH
T ss_pred cccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeC--CHHHHHHhh
Confidence 45666666554 4457899999999999999976 35555555 677788899999986 666665543
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.44 E-value=1.2e-07 Score=99.39 Aligned_cols=56 Identities=23% Similarity=0.155 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhC-----CCEEEEEcCCccCHHHHHhCCccEEecCCCc-HHHHhccCEEecc
Q 047874 646 LDKLLMVQSLKQK-----GHVVAVTGDGTNDAPALRAADIGLSMGIQGT-EVAKESSDIVIMD 702 (941)
Q Consensus 646 ~~K~~iv~~l~~~-----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~-~~a~~~ad~vl~~ 702 (941)
.+|...++.+.+. .+.|+++||+.||.+||+.|++||||| |+. +..++.||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeC-CCCccccchhceEEecc
Confidence 4688888877654 368999999999999999999999999 787 6678889987753
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.39 E-value=5.4e-07 Score=92.45 Aligned_cols=127 Identities=13% Similarity=0.119 Sum_probs=90.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+..... ..-
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~------f~~~~~~~~~~~----------------~kp 143 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFY------FDAIVGSSLDGK----------------LST 143 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGG------CSEEEEECTTSS----------------SCS
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhh------eeeeeccCCCCC----------------CCC
Confidence 4678999999999999999999999999999999999998631 112222211100 001
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc---cEEecCCCcHHH--HhccCEEeccCCchHHHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI---GLSMGIQGTEVA--KESSDIVIMDDNFSSVVTVLRWG 715 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v---gIam~~~~~~~a--~~~ad~vl~~~~~~~i~~~i~~g 715 (941)
.|+--..+.+.+.-..+.|+++||+.||.+|.+.||+ +|++| ++.... +..||+++. ++..+.+++...
T Consensus 144 ~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ad~v~~--s~~el~~~~~~~ 217 (226)
T 3mc1_A 144 KEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYG-FGSYEELKNAGANYIVN--SVDELHKKILEL 217 (226)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSS-SSCHHHHHHHTCSEEES--SHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccC-CCCHHHHHHcCCCEEEC--CHHHHHHHHHHH
Confidence 2222333444444345689999999999999999999 88888 544333 588999997 788888877653
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.38 E-value=8.1e-07 Score=91.65 Aligned_cols=124 Identities=13% Similarity=0.117 Sum_probs=83.5
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.+++.+.++.|++.|+++.++|+... +..+.+.+|+... ...++.+.... ...-.
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~------f~~i~~~~~~~----------------~~Kp~ 148 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDD------FHAIVDPTTLA----------------KGKPD 148 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTT------CSEECCC-------------------------
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhh------cCEEeeHhhCC----------------CCCCC
Confidence 578999999999999999999999855 7788889998642 11222222110 11112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
|+--..+.+.+.-..+.+++|||+.||+.|.+.||++++|. ++.+..+ .||+++.+.+...+..+++.
T Consensus 149 ~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s~~el~~~~~~~~ 216 (233)
T 3nas_A 149 PDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQTSDLTLELLHEE 216 (233)
T ss_dssp CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSSGGGCCHHHHHHH
T ss_pred hHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCChHhCCHHHHHHH
Confidence 33334555555555678999999999999999999999998 6666655 89999987766666655543
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.37 E-value=3.2e-07 Score=98.57 Aligned_cols=131 Identities=16% Similarity=0.132 Sum_probs=89.4
Q ss_pred CCcchHHHHHHHHhc-CCeEEEEcCC---------------------CHHHHHHHHHHcCCCCCCCCCCcccceecchhc
Q 047874 565 CRPGVRAAVESCRNA-GVNVKMVTGD---------------------NVHTARAIAIECGILNPDVDLNKDEAVIEGVQF 622 (941)
Q Consensus 565 ~~~~~~~~I~~l~~a-Gi~v~i~TGd---------------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~ 622 (941)
.++++.+.++.+++. |+++.+.|.. ....+..+.+..|+... +......
T Consensus 123 ~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~---------~~~~~~~ 193 (289)
T 3gyg_A 123 SKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVN---------INRCNPL 193 (289)
T ss_dssp CHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEE---------EEECCGG
T ss_pred CHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEE---------EEEcccc
Confidence 567899999999998 9999988876 33344444444444210 0000000
Q ss_pred ccCCHHHHHHhhcCceEEEecCH--HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhcc
Q 047874 623 RSLSAEERIAKIESIRVMARSSP--LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESS 696 (941)
Q Consensus 623 ~~~~~~~~~~~~~~~~v~~~~~p--~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~a 696 (941)
... .....+....| ..|...++.+.+. .+.++++||+.||.+|++.|++|++|+ ++.+..++.|
T Consensus 194 ~~~---------~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a 263 (289)
T 3gyg_A 194 AGD---------PEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLH 263 (289)
T ss_dssp GTC---------CTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHC
T ss_pred ccC---------CCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhC
Confidence 000 00002222222 3577777666553 357999999999999999999999999 8999999999
Q ss_pred CEEeccCCchHHHHHHHH
Q 047874 697 DIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 697 d~vl~~~~~~~i~~~i~~ 714 (941)
|+++.+++.+++.++|++
T Consensus 264 ~~v~~~~~~~gv~~~~~~ 281 (289)
T 3gyg_A 264 NLITDSEYSKGITNTLKK 281 (289)
T ss_dssp CCBCSSCHHHHHHHHHHH
T ss_pred CEEcCCCCcCHHHHHHHH
Confidence 999999999999988864
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.35 E-value=4.3e-07 Score=92.69 Aligned_cols=122 Identities=7% Similarity=0.071 Sum_probs=86.4
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.+++.+.++.+++.|+++.++|+. ..+..+.+.+|+... ...++.+..... ..-.
T Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~------f~~~~~~~~~~~----------------~Kp~ 147 (221)
T 2wf7_A 92 VYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGY------FDAIADPAEVAA----------------SKPA 147 (221)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGG------CSEECCTTTSSS----------------CTTS
T ss_pred CCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHH------cceEeccccCCC----------------CCCC
Confidence 5689999999999999999999998 445667778887531 112222221110 0112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
|+--..+.+.+.-..+.|+++||+.||.+|++.||++++|. ++.+..+ .||+++.+.+..++..++
T Consensus 148 ~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~el~~~~~~ 213 (221)
T 2wf7_A 148 PDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTSHYTLEFLK 213 (221)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGGGCCHHHHH
T ss_pred hHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHHhCCHHHHH
Confidence 33334444555444668999999999999999999999999 7777777 899999877766666554
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.32 E-value=5.7e-07 Score=92.61 Aligned_cols=127 Identities=15% Similarity=0.060 Sum_probs=91.3
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+..... ..-.
T Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~------f~~~~~~~~~~~----------------~kp~ 149 (233)
T 3s6j_A 92 ALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDIN------KINIVTRDDVSY----------------GKPD 149 (233)
T ss_dssp ECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTT------SSCEECGGGSSC----------------CTTS
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhh------hheeeccccCCC----------------CCCC
Confidence 468999999999999999999999999999999999998652 122333322110 1112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc---cEEecCCCcHHHHhc-cCEEeccCCchHHHHHHHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI---GLSMGIQGTEVAKES-SDIVIMDDNFSSVVTVLRWG 715 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v---gIam~~~~~~~a~~~-ad~vl~~~~~~~i~~~i~~g 715 (941)
|+--..+.+.+.-..+.+++|||+.||..|.+.||+ +|++|.+..+..++. ||+++. ++..+.++++..
T Consensus 150 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~--~~~el~~~l~~~ 222 (233)
T 3s6j_A 150 PDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYE--DPLDLLNHLDEI 222 (233)
T ss_dssp THHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEES--SHHHHHHTGGGT
T ss_pred hHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEEC--CHHHHHHHHHHH
Confidence 333334444444345689999999999999999999 666664555555554 999986 788888877654
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.32 E-value=7.5e-07 Score=91.08 Aligned_cols=121 Identities=17% Similarity=0.235 Sum_probs=85.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
.+.+++.+.++.+++.|++++++|+..........+.+|+... ...++.+.... ....
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~----------------~~kp 151 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS------FDALASAEKLP----------------YSKP 151 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG------CSEEEECTTSS----------------CCTT
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhh------CcEEEeccccC----------------CCCC
Confidence 3468899999999999999999999999888888898887531 11122211110 0011
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEe----cCCCcHHHHhccCEEeccCCchHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSM----GIQGTEVAKESSDIVIMDDNFSSVV 709 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam----~~~~~~~a~~~ad~vl~~~~~~~i~ 709 (941)
.|+--..+.+.+.-..+.++++||+.||.+|++.||+++++ + ++.+..+..||+++. ++..+.
T Consensus 152 ~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~--~~~el~ 218 (226)
T 1te2_A 152 HPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLS--SLTELT 218 (226)
T ss_dssp STHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECS--CGGGCC
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEEC--CHHHHh
Confidence 23344455555554567899999999999999999999998 5 555566788999987 444443
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=4.9e-06 Score=79.25 Aligned_cols=144 Identities=16% Similarity=0.252 Sum_probs=86.6
Q ss_pred cccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcC
Q 047874 363 KTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLG 442 (941)
Q Consensus 363 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~ 442 (941)
..||+|-|++.+.++...+. ++ ..+++..+.++. ..+.||+.+|++++++.+.+
T Consensus 13 ~~~tit~gnr~vt~v~~~~g-~~-----------e~elL~lAAs~E--------------~~SeHPla~AIv~~A~~~~~ 66 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQG-VD-----------EKTLADAAQLAS--------------LADETPEGRSIVILAKQRFN 66 (156)
T ss_dssp --------CEEEEEEEECTT-SC-----------HHHHHHHHHHTT--------------SSCCSHHHHHHHHHHHHHTT
T ss_pred CCCceecCCCeEEEEEecCC-CC-----------HHHHHHHHHHHh--------------CcCCCHHHHHHHHHHHHhcC
Confidence 46999999999999976432 11 123344343322 22569999999999983325
Q ss_pred CCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHH
Q 047874 443 MNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEM 522 (941)
Q Consensus 443 ~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~ 522 (941)
........ ......+|++..++.++.+ ++. .+.+|+++.|...+... |. .++ ..+.+..+++
T Consensus 67 l~~~~~~~--~~~~~~~F~a~~G~~Gv~v---~G~---~v~vGn~~~i~~l~~~~----gi--~~~----~~~~~~~~~l 128 (156)
T 1svj_A 67 LRERDVQS--LHATFVPFTAQSRMSGINI---DNR---MIRKGSVDAIRRHVEAN----GG--HFP----TDVDQKVDQV 128 (156)
T ss_dssp CCCCCHHH--HTCEEEEEETTTTEEEEEE---TTE---EEEEEEHHHHHHHHHHH----TC--CCC----HHHHHHHHHH
T ss_pred CCcccccc--cccceeeccccCCCCeEEE---CCE---EEEEeCcHHHHHHHHHc----CC--CCc----HHHHHHHHHH
Confidence 54322100 0123568888888788743 443 35689988766555321 10 011 2356677889
Q ss_pred HhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCc
Q 047874 523 AAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRP 567 (941)
Q Consensus 523 ~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~ 567 (941)
+++|.+++.+|. |..++|++++.|++|+
T Consensus 129 a~~G~T~v~VA~-----------------d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 129 ARQGATPLVVVE-----------------GSRVLGVIALKDIVKG 156 (156)
T ss_dssp HHTTCEEEEEEE-----------------TTEEEEEEEEEECCCC
T ss_pred HhCCCCEEEEEE-----------------CCEEEEEEEEecCCCC
Confidence 999999999985 4579999999999996
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.28 E-value=1.9e-06 Score=91.03 Aligned_cols=127 Identities=17% Similarity=0.217 Sum_probs=88.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...++.+.... ....
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~----------------~~kp 161 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-----PDFLVTPDDVP----------------AGRP 161 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-----CSCCBCGGGSS----------------CCTT
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccC-----hHheecCCccC----------------CCCC
Confidence 45689999999999999999999999998888888888765320 01222222111 0112
Q ss_pred CHHHHHHHHHHHHhCC-CEEEEEcCCccCHHHHHhCC---ccEEecCCC------------------------cHHHHhc
Q 047874 644 SPLDKLLMVQSLKQKG-HVVAVTGDGTNDAPALRAAD---IGLSMGIQG------------------------TEVAKES 695 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g-~~v~~iGDg~ND~~~l~~A~---vgIam~~~~------------------------~~~a~~~ 695 (941)
.|+--..+.+.+.-.. +.|+++||+.||.+|++.|| +++++| ++ .+..++.
T Consensus 162 ~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (267)
T 1swv_A 162 YPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG-SSELGLTEEEVENMDSVELREKIEVVRNRFVEN 240 (267)
T ss_dssp SSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT-CTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC-CCccCccHHHHhhchhhhhhhhhhhHHHHHHhc
Confidence 3444455555555445 78999999999999999999 677777 44 2334444
Q ss_pred -cCEEeccCCchHHHHHHHH
Q 047874 696 -SDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 696 -ad~vl~~~~~~~i~~~i~~ 714 (941)
||+++. ++..+..++..
T Consensus 241 ~ad~v~~--~~~el~~~l~~ 258 (267)
T 1swv_A 241 GAHFTIE--TMQELESVMEH 258 (267)
T ss_dssp TCSEEES--SGGGHHHHHHH
T ss_pred CCceecc--CHHHHHHHHHH
Confidence 999986 67777777644
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.25 E-value=3.9e-06 Score=86.51 Aligned_cols=104 Identities=20% Similarity=0.159 Sum_probs=74.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCcccceecchhcccCCHHHHHHhhcCceEE-E
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDV-DLNKDEAVIEGVQFRSLSAEERIAKIESIRVM-A 641 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~-~ 641 (941)
.+.|++.+.++.|+++|+++.++||.....+..+++.+|+..--. ..........|. +. .
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~------------------~~~~ 153 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGR------------------IEGT 153 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEEE------------------EESS
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEeee------------------ecCC
Confidence 468999999999999999999999999999999999999862100 000000001111 01 1
Q ss_pred ecCHHHHHHHHHHHHh-CC------CEEEEEcCCccCHHHHHhCCccEEec
Q 047874 642 RSSPLDKLLMVQSLKQ-KG------HVVAVTGDGTNDAPALRAADIGLSMG 685 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~-~g------~~v~~iGDg~ND~~~l~~A~vgIam~ 685 (941)
.+.+..|...++.+.+ .| +.++++||+.||.+|++.||+++++.
T Consensus 154 ~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 154 PSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp CSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred CCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 1234677776655543 34 68999999999999999999999995
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.21 E-value=1.5e-06 Score=89.36 Aligned_cols=129 Identities=21% Similarity=0.251 Sum_probs=86.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.++++.|+++|++++++|+.+...+..+.+.+|+..... ...++. +. ....+.+..
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~----f~~~~~---~~-----------~~~~~~~~~ 147 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNV----FANRLK---FY-----------FNGEYAGFD 147 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGE----EEECEE---EC-----------TTSCEEEEC
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccE----EeeeEE---Ec-----------CCCcEecCC
Confidence 578999999999999999999999999999999999999863100 000000 00 000011111
Q ss_pred ------CHHHHHHHHHHHHhC-C-CEEEEEcCCccCHHHHHhCCccEEecCCC-cHHHHhccCEEeccCCchHHHHHH
Q 047874 644 ------SPLDKLLMVQSLKQK-G-HVVAVTGDGTNDAPALRAADIGLSMGIQG-TEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 644 ------~p~~K~~iv~~l~~~-g-~~v~~iGDg~ND~~~l~~A~vgIam~~~~-~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
.+..|-.+++.+.+. | +.++++||+.||.+|.+.||++|+++... .+.....+|+++. ++..+..++
T Consensus 148 ~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (225)
T 1nnl_A 148 ETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVELLGEL 223 (225)
T ss_dssp TTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGGCC--
T ss_pred CCCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHHHHHHH
Confidence 123566666555443 3 67999999999999999999999887322 2344567899886 566555443
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.21 E-value=1.5e-06 Score=88.64 Aligned_cols=122 Identities=16% Similarity=0.180 Sum_probs=81.6
Q ss_pred CcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCH
Q 047874 566 RPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSP 645 (941)
Q Consensus 566 ~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p 645 (941)
.+++.+.++.+++.|+++.++|+..........+.+|+... ...++.+..... ....|
T Consensus 91 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~----------------~k~~~ 148 (225)
T 3d6j_A 91 FPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDW------FDIIIGGEDVTH----------------HKPDP 148 (225)
T ss_dssp CTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTC------CSEEECGGGCSS----------------CTTST
T ss_pred CcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhh------eeeeeehhhcCC----------------CCCCh
Confidence 58999999999999999999999999988888888887542 112222221100 00112
Q ss_pred HHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEe----cCCCcHHHHhc-cCEEeccCCchHHHHHH
Q 047874 646 LDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSM----GIQGTEVAKES-SDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 646 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam----~~~~~~~a~~~-ad~vl~~~~~~~i~~~i 712 (941)
.--..+.+.+.-..+.++++||+.||.+|++.||++++| + ++.+..++. ||+++. ++..+.+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~--~~~el~~~l 217 (225)
T 3d6j_A 149 EGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIIS--TLGQLISVP 217 (225)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEES--SGGGGC---
T ss_pred HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEEC--CHHHHHHhh
Confidence 222344444443456799999999999999999998887 3 344444544 899986 555555555
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.20 E-value=1.1e-06 Score=90.61 Aligned_cols=127 Identities=10% Similarity=0.101 Sum_probs=93.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.... ...-
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~------f~~~~~~~~~~----------------~~kp 156 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGL------FDHVLSVDAVR----------------LYKT 156 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTT------CSEEEEGGGTT----------------CCTT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhh------cCEEEEecccC----------------CCCc
Confidence 4568999999999999999999999999999999999998642 11222222111 0111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEe----cCCCcHHHHhccCEEeccCCchHHHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSM----GIQGTEVAKESSDIVIMDDNFSSVVTVLRWG 715 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam----~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 715 (941)
.|+--..+.+.+.-..+.++++||+.||+.|.+.||+++++ + ++.+..+..+|+++. ++..+.+++...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~--~~~el~~~l~~~ 229 (233)
T 3umb_A 157 APAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGH--DMRDLLQFVQAR 229 (233)
T ss_dssp SHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEES--SHHHHHHHHHC-
T ss_pred CHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEEC--CHHHHHHHHHHh
Confidence 23334445555554567899999999999999999999999 5 555556778999987 788888877653
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.15 E-value=6.4e-06 Score=84.71 Aligned_cols=125 Identities=17% Similarity=0.193 Sum_probs=91.3
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
.+.+++.+.++.|++. +++.++|+.....+....+.+|+... ...++.+.... ...-
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~------f~~~~~~~~~~----------------~~kp 156 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDL------FDSITTSEEAG----------------FFKP 156 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGG------CSEEEEHHHHT----------------BCTT
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHH------cceeEeccccC----------------CCCc
Confidence 4678999999999999 99999999999999999999998631 11222222110 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhCC---ccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAAD---IGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~---vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.|+--..+.+.+.-..+.++++||+. ||..|.+.|| +++++| ++.+..++.+|+++. ++..+.++++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~--~~~el~~~l~~ 228 (234)
T 3u26_A 157 HPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVS--DLREVIKIVDE 228 (234)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEES--STHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeC--CHHHHHHHHHH
Confidence 23334445555554567899999997 9999999999 677777 677777779999997 77888777653
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.14 E-value=2.3e-06 Score=87.80 Aligned_cols=126 Identities=14% Similarity=0.126 Sum_probs=90.1
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
-++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.... ...
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~------f~~~~~~~~~~----------------~~k 152 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNS------FDHLISVDEVR----------------LFK 152 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGG------CSEEEEGGGTT----------------CCT
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhh------cceeEehhhcc----------------cCC
Confidence 35678999999999999999999999999999999999998642 11222222111 011
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecC---CCcHHHHhccCEEeccCCchHHHHHH
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGI---QGTEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~---~~~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
-.|+--..+.+.+.-..+.++++||+.||+.|.+.||+++++-. ++.+..+..+|+++. ++..+..++
T Consensus 153 p~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (230)
T 3um9_A 153 PHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLASRF 223 (230)
T ss_dssp TCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHHTC
T ss_pred CChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHHHH
Confidence 12333344555555456789999999999999999999999831 444555678999987 667666554
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.14 E-value=3.1e-06 Score=87.69 Aligned_cols=124 Identities=15% Similarity=0.089 Sum_probs=86.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+..... ..-
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~------f~~~~~~~~~~~----------------~kp 167 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRY------FKYIAGSNLDGT----------------RVN 167 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGG------CSEEEEECTTSC----------------CCC
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhh------EEEEEeccccCC----------------CCC
Confidence 3578999999999999999999999999999999999998642 112222211100 011
Q ss_pred CHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHHHhCCc---cEEecCCCcHH--HHhccCEEeccCCchHHHHHH
Q 047874 644 SPLDKLLMVQSLKQK-GHVVAVTGDGTNDAPALRAADI---GLSMGIQGTEV--AKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~v---gIam~~~~~~~--a~~~ad~vl~~~~~~~i~~~i 712 (941)
.|+--..+.+.+.-. .+.+++|||+.||+.|.+.||+ +|++| ++... .+..+|+++. ++..+.++|
T Consensus 168 ~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ad~v~~--~~~el~~~l 239 (240)
T 3sd7_A 168 KNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYG-YGSFEEISESEPTYIVE--NVESIKDIL 239 (240)
T ss_dssp HHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SCCHHHHHHHCCSEEES--SSTTHHHHH
T ss_pred CHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCC-CCCHHHHhhcCCCEEEC--CHHHHHHHh
Confidence 222233444555445 6789999999999999999999 77777 44433 3578999987 566666544
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.14 E-value=4.1e-06 Score=86.16 Aligned_cols=125 Identities=12% Similarity=0.062 Sum_probs=85.4
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCC---HHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEE
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDN---VHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~---~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
+.+++.+.++.|++.|+++.++|+.. ........+.+|+... ...++.+.+... .
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~------f~~~~~~~~~~~----------------~ 157 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEF------IDKTFFADEVLS----------------Y 157 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGG------CSEEEEHHHHTC----------------C
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHH------hhhheeccccCC----------------C
Confidence 46899999999999999999999999 8888888898887531 112222221110 0
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhCCccEEecC--CCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 642 RSSPLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAADIGLSMGI--QGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~vgIam~~--~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
.-.|+--..+.+.+.-..+.++++||+. ||..|.+.||+++++-. ++.+..+..+|+++. ++..+..+++
T Consensus 158 kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 230 (235)
T 2om6_A 158 KPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIP--SIANLKDVIE 230 (235)
T ss_dssp TTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEES--SGGGHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHh--hHHHHHHHHH
Confidence 1123333334444443456899999999 99999999999999831 333334455788875 6777776664
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.12 E-value=3.3e-06 Score=83.36 Aligned_cols=126 Identities=15% Similarity=0.054 Sum_probs=82.2
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCH---------------HHHHHHHHHcC--CCCCCCCCCcccceecchhcccCC
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNV---------------HTARAIAIECG--ILNPDVDLNKDEAVIEGVQFRSLS 626 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~---------------~~a~~ia~~~g--i~~~~~~~~~~~~~~~g~~~~~~~ 626 (941)
++.|++.+++++|+++|+++.++|+.+. ..+....+.+| +..-- ...+..+....
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-----~~~~~~~~~~~--- 98 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIF-----MCPHGPDDGCA--- 98 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEE-----EECCCTTSCCS---
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEE-----EcCCCCCCCCC---
Confidence 5779999999999999999999999986 56667777888 32100 00000000000
Q ss_pred HHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc---cEEecCCCcHHHH----hccCEE
Q 047874 627 AEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI---GLSMGIQGTEVAK----ESSDIV 699 (941)
Q Consensus 627 ~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v---gIam~~~~~~~a~----~~ad~v 699 (941)
...-.|+-=..+.+.+.-..+.+++|||+.||..|.++||+ +|+.| ++..... ..+|++
T Consensus 99 -------------~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~~d~v 164 (179)
T 3l8h_A 99 -------------CRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLPEGTRV 164 (179)
T ss_dssp -------------SSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCCTTEEE
T ss_pred -------------CCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC-CcchhhhhcccCCCcEE
Confidence 00112233344555555556789999999999999999995 66666 4444333 457998
Q ss_pred eccCCchHHHHHHH
Q 047874 700 IMDDNFSSVVTVLR 713 (941)
Q Consensus 700 l~~~~~~~i~~~i~ 713 (941)
+. ++..+.+++.
T Consensus 165 ~~--~l~el~~~l~ 176 (179)
T 3l8h_A 165 CE--DLAAVAEQLL 176 (179)
T ss_dssp ES--SHHHHHHHHH
T ss_pred ec--CHHHHHHHHH
Confidence 87 7777777664
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.11 E-value=2.5e-06 Score=85.53 Aligned_cols=118 Identities=14% Similarity=0.182 Sum_probs=83.3
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.+++.+.++.+++.|++++++|+....... ..+.+|+... ...++.+.... .....
T Consensus 86 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~------f~~~~~~~~~~----------------~~Kp~ 142 (207)
T 2go7_A 86 LMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESY------FTEILTSQSGF----------------VRKPS 142 (207)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGG------EEEEECGGGCC----------------CCTTS
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhh------eeeEEecCcCC----------------CCCCC
Confidence 5689999999999999999999999988888 8888887531 11222221110 00112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCcHHHHhccCEEeccCCchHHHHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGTEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
|+--..+.+.++-..+.++++||+.||.+|++.||++ |+|+ ++. . .||+++. ++..+.+++
T Consensus 143 ~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~-~---~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 143 PEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-EST-Y---EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCS-C---TTEEECS--STTHHHHHT
T ss_pred cHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEe-cCC-C---CCCEEeC--CHHHHHHHH
Confidence 3333455555555567899999999999999999997 8887 665 3 6899886 556666544
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.10 E-value=4.8e-06 Score=85.69 Aligned_cols=121 Identities=13% Similarity=0.160 Sum_probs=83.9
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.+++.+.++.|++.|+++.++|+.....+....+.+|+... ...++.+.... ...-.
T Consensus 104 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~------f~~i~~~~~~~----------------~~Kp~ 161 (231)
T 3kzx_A 104 LNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHY------FDSIIGSGDTG----------------TIKPS 161 (231)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGG------CSEEEEETSSS----------------CCTTS
T ss_pred ECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhh------eeeEEcccccC----------------CCCCC
Confidence 578999999999999999999999999999999999998631 11222221110 01112
Q ss_pred HHHHHHHHHHHHhCCC-EEEEEcCCccCHHHHHhCCc-cEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 645 PLDKLLMVQSLKQKGH-VVAVTGDGTNDAPALRAADI-GLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~-~v~~iGDg~ND~~~l~~A~v-gIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
|+--..+.+.+.-..+ .+++|||+.||+.|.+.||+ +|.++ ++.+ ..+|+++. ++..+.+++.
T Consensus 162 ~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~--~~~el~~~l~ 226 (231)
T 3kzx_A 162 PEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFK--NFYDIRNFIC 226 (231)
T ss_dssp SHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEES--SHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeC--CHHHHHHHHH
Confidence 3333455555554555 79999999999999999997 67776 5544 35777776 6777776664
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=3.5e-06 Score=89.85 Aligned_cols=128 Identities=10% Similarity=-0.013 Sum_probs=88.0
Q ss_pred CCCcchHHHHHHHHhcCC--eEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEE
Q 047874 564 PCRPGVRAAVESCRNAGV--NVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi--~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
++.+++.+.++.|++.|+ +++++|+.....+....+.+|+... ...++.+...... ....
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~------fd~v~~~~~~~~~------------~~~~ 203 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADL------FDGLTYCDYSRTD------------TLVC 203 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTS------CSEEECCCCSSCS------------SCCC
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccc------cceEEEeccCCCc------------ccCC
Confidence 567899999999999999 9999999999999999999998642 1122222111000 0011
Q ss_pred ecCHHHHHHHHHHHHhCC-CEEEEEcCCccCHHHHHhCCccEEecCCCcHHH------HhccCEEeccCCchHHHHHH
Q 047874 642 RSSPLDKLLMVQSLKQKG-HVVAVTGDGTNDAPALRAADIGLSMGIQGTEVA------KESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~g-~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a------~~~ad~vl~~~~~~~i~~~i 712 (941)
.-.|+--..+.+.+.-.. +.|++|||+.||..|.+.||+|.+|+ ++.... ...||+++. ++..+.+++
T Consensus 204 Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~ad~vi~--sl~el~~~l 278 (282)
T 3nuq_A 204 KPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIH-LVENEVNEILGQTPEGAIVIS--DILELPHVV 278 (282)
T ss_dssp TTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEE-ECSCCC----CCCCTTCEEES--SGGGGGGTS
T ss_pred CcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEE-EcCCccccccccCCCCCEEeC--CHHHHHHHh
Confidence 123333344445554455 78999999999999999999999987 444432 337889886 666655443
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.08 E-value=2.1e-06 Score=89.50 Aligned_cols=121 Identities=17% Similarity=0.264 Sum_probs=85.3
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+..... ..-
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~------f~~~~~~~~~~~----------------~Kp 171 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL------FSEMLGGQSLPE----------------IKP 171 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG------CSEEECTTTSSS----------------CTT
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchhe------EEEEEecccCCC----------------CCc
Confidence 4568999999999999999999999999999999999998531 122333222111 011
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEE-ecCC----CcHHHHhccCEEeccCCchHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS-MGIQ----GTEVAKESSDIVIMDDNFSSVV 709 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa-m~~~----~~~~a~~~ad~vl~~~~~~~i~ 709 (941)
.|+--..+.+.+.-..+.++++||+.||++|.+.||+++. +. . +.+..+..+|+++. ++..+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~ad~vi~--~~~el~ 239 (243)
T 2hsz_A 172 HPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLT-YGYNYNIPIAQSKPDWIFD--DFADIL 239 (243)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEES-SSCSTTCCGGGGCCSEEES--SGGGGG
T ss_pred CHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEc-CCCCchhhhhhCCCCEEEC--CHHHHH
Confidence 2344455556665556789999999999999999999843 43 2 23345677999986 455544
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.07 E-value=9.2e-06 Score=85.93 Aligned_cols=128 Identities=15% Similarity=0.067 Sum_probs=88.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...++.+..... ..-
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~----------------~kp 169 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT-----PASTVFATDVVR----------------GRP 169 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCC-----CSEEECGGGSSS----------------CTT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCC-----CceEecHHhcCC----------------CCC
Confidence 46789999999999999999999999999999999988875420 122222222110 111
Q ss_pred CHHHHHHHHHHHHhCC-CEEEEEcCCccCHHHHHhCC---ccEEecCC-----------------------CcHHHH-hc
Q 047874 644 SPLDKLLMVQSLKQKG-HVVAVTGDGTNDAPALRAAD---IGLSMGIQ-----------------------GTEVAK-ES 695 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g-~~v~~iGDg~ND~~~l~~A~---vgIam~~~-----------------------~~~~a~-~~ 695 (941)
.|.--..+.+.+.-.. +.|++|||+.||+.|.+.|| ++|++|.+ +.+..+ ..
T Consensus 170 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 249 (277)
T 3iru_A 170 FPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAG 249 (277)
T ss_dssp SSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCC
Confidence 2333345555555556 78999999999999999999 56666632 123334 34
Q ss_pred cCEEeccCCchHHHHHHHH
Q 047874 696 SDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 696 ad~vl~~~~~~~i~~~i~~ 714 (941)
+|+++. ++..+..+++.
T Consensus 250 ad~v~~--~~~el~~~l~~ 266 (277)
T 3iru_A 250 AHYVID--SVADLETVITD 266 (277)
T ss_dssp CSEEES--SGGGTHHHHHH
T ss_pred CCEEec--CHHHHHHHHHH
Confidence 999997 77777777754
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.07 E-value=8.5e-06 Score=83.76 Aligned_cols=120 Identities=18% Similarity=0.091 Sum_probs=79.9
Q ss_pred CCcchHHHHHHHHhc-CCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 565 CRPGVRAAVESCRNA-GVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 565 ~~~~~~~~I~~l~~a-Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+...- ..++.+.+.. .
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f------~~~~~~~~~~-------------------~ 148 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF------PFGAFADDAL-------------------D 148 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC------SCEECTTTCS-------------------S
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhc------CcceecCCCc-------------------C
Confidence 468999999999999 9999999999999999999999886421 1122222210 0
Q ss_pred CHHHHH----HHHHHHH--hCCCEEEEEcCCccCHHHHHhCC---ccEEecCCCcHHHH-h-ccCEEeccCCchHHHHHH
Q 047874 644 SPLDKL----LMVQSLK--QKGHVVAVTGDGTNDAPALRAAD---IGLSMGIQGTEVAK-E-SSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 644 ~p~~K~----~iv~~l~--~~g~~v~~iGDg~ND~~~l~~A~---vgIam~~~~~~~a~-~-~ad~vl~~~~~~~i~~~i 712 (941)
.+.-+. .+.+.+. -..+.++++||+.||.+|.+.|| ++|++| ++..... . .+|+++. ++..+..++
T Consensus 149 ~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~~~a~~v~~--~~~el~~~l 225 (234)
T 2hcf_A 149 RNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATG-NFTMEELARHKPGTLFK--NFAETDEVL 225 (234)
T ss_dssp GGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS-SSCHHHHHTTCCSEEES--CSCCHHHHH
T ss_pred ccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEeC--CHHhHHHHH
Confidence 111122 2233333 23468999999999999999999 555555 3333333 2 3899987 445555544
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.07 E-value=2.5e-06 Score=86.18 Aligned_cols=121 Identities=13% Similarity=0.168 Sum_probs=86.3
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.+++.+.++.|++.|+++.++|+.....+....+.+|+... ...++.+..... ..-.
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~------f~~~~~~~~~~~----------------~kp~ 147 (214)
T 3e58_A 90 IFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGF------FDIVLSGEEFKE----------------SKPN 147 (214)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG------CSEEEEGGGCSS----------------CTTS
T ss_pred cCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhh------eeeEeecccccC----------------CCCC
Confidence 578999999999999999999999999999999999998642 122222222110 1113
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCC-cHHHHhccCEEeccCCchHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQG-TEVAKESSDIVIMDDNFSSVV 709 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~-~~~a~~~ad~vl~~~~~~~i~ 709 (941)
|+--..+.+.+.-..+.++++||+.||..|.+.||+++++..++ ....+..+|+++. ++..+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el~ 211 (214)
T 3e58_A 148 PEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDVL 211 (214)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGGG
T ss_pred hHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHHH
Confidence 34445555666555678999999999999999999988876332 3334477899886 444443
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.06 E-value=3.4e-06 Score=93.53 Aligned_cols=110 Identities=17% Similarity=0.194 Sum_probs=75.3
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEE
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
..++.|++++.|+.|+++|++|+|+||.....++.+|+++|+...-. ...++ |..+.... +-.+-.
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip----~~~Vi-g~~l~~~~---------dG~~tg 284 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMK----EEKVL-GLRLMKDD---------EGKILP 284 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCC----GGGEE-EECEEECT---------TCCEEE
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCC----cceEE-EeEEEEec---------CCceee
Confidence 34578999999999999999999999999999999999998743100 01111 22111000 000111
Q ss_pred e-------cCHHHHHHHHHHHHhC---CCEEEEEcCCccCHHHHHh-CCccEEec
Q 047874 642 R-------SSPLDKLLMVQSLKQK---GHVVAVTGDGTNDAPALRA-ADIGLSMG 685 (941)
Q Consensus 642 ~-------~~p~~K~~iv~~l~~~---g~~v~~iGDg~ND~~~l~~-A~vgIam~ 685 (941)
+ +..+.|...++.+.+. ...++++|||.||.+||++ +|.++++.
T Consensus 285 ~~~~~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~li 339 (385)
T 4gxt_A 285 KFDKDFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLI 339 (385)
T ss_dssp EECTTSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEE
T ss_pred eecCccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEE
Confidence 1 3457899999887533 2357889999999999996 56666554
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.03 E-value=6.4e-06 Score=85.54 Aligned_cols=126 Identities=13% Similarity=0.158 Sum_probs=85.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|++.|+++.++|+.....+....+. |+...- ....++.+..... ...
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f----~~d~i~~~~~~~~----------------~kp 167 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMF----HKELMVTAFDVKY----------------GKP 167 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTC----CGGGEECTTTCSS----------------CTT
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhc----CcceEEeHHhCCC----------------CCC
Confidence 4678999999999999999999999998877777777 776421 0022333332211 112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCcHH----HHhccCEEeccCCchHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGTEV----AKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~~----a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
.|+--..+.+.+.-..+.|+++||+.||+.|.+.||++ |++. ++... .+..||+++. ++..+.++++
T Consensus 168 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--s~~el~~~l~ 239 (243)
T 3qxg_A 168 NPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFP--SMQTLCDSWD 239 (243)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEES--CHHHHHHHHH
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 23333444455444467899999999999999999994 5554 44322 2346999986 7788777664
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.01 E-value=5.4e-06 Score=84.94 Aligned_cols=126 Identities=15% Similarity=0.139 Sum_probs=88.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.++++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+.. ...-
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~------f~~i~~~~~~~----------------~~Kp 140 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGY------FDLIVGGDTFG----------------EKKP 140 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG------CSEEECTTSSC----------------TTCC
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHH------heEEEecCcCC----------------CCCC
Confidence 4578999999999999999999999999999999999997531 11222222110 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecC-CCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGI-QGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.|+-...+.+.+.-..+.++++||+.||.+|.+.||+. |++.. .+.... ..+|+++. ++..+..++..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~--~~~el~~~l~~ 210 (222)
T 2nyv_A 141 SPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLS--RPSDLVKLMDN 210 (222)
T ss_dssp TTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEES--STTHHHHHHHT
T ss_pred ChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEEC--CHHHHHHHHHH
Confidence 34445556666655567899999999999999999987 66541 222222 66888886 67777776643
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.00 E-value=1.1e-05 Score=83.78 Aligned_cols=128 Identities=13% Similarity=0.123 Sum_probs=84.3
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
.++.+++.+.++.|+++|+++.++|+.....+....+. |+...- ....++.+..... ..
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f----~~~~~~~~~~~~~----------------~k 165 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIF----QANLMVTAFDVKY----------------GK 165 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTC----CGGGEECGGGCSS----------------CT
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhc----CCCeEEecccCCC----------------CC
Confidence 35678999999999999999999999998877777777 876421 0022333332111 11
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCcHH----HHhccCEEeccCCchHHHHHHHH
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGTEV----AKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~~----a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
..|+--..+.+.+.-..+.++++||+.||+.|.+.||+. |++. ++... .+..||+++. ++..+.++++.
T Consensus 166 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--~~~el~~~l~~ 239 (247)
T 3dv9_A 166 PNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVN-TGPLHDNVLLNEGANLLFH--SMPDFNKNWET 239 (247)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEEC-CSSSCHHHHHTTTCSEEES--SHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEc-CCCCCHHHHHhcCCCEEEC--CHHHHHHHHHH
Confidence 233444455555555567899999999999999999975 4444 33222 2247999987 67777766653
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.98 E-value=5.5e-06 Score=85.29 Aligned_cols=126 Identities=11% Similarity=0.107 Sum_probs=87.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|+++|+++.++|+.....+..+.+.+|+... ...++.+.... ...-
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~------f~~~~~~~~~~----------------~~Kp 152 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDG------FDHLLSVDPVQ----------------VYKP 152 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG------CSEEEESGGGT----------------CCTT
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhh------hheEEEecccC----------------CCCC
Confidence 4679999999999999999999999999999999999998531 11222222111 1112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecC---CCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGI---QGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~---~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
.|+--..+.+.+.-..+.++++||+.||..|.+.||+++++-. +..+..+..+|+++. ++..+..++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 223 (232)
T 1zrn_A 153 DNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVELFE 223 (232)
T ss_dssp SHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTTC-
T ss_pred CHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHHHH
Confidence 3444445555555456689999999999999999999988731 222334456898886 6666665543
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=1.1e-05 Score=83.49 Aligned_cols=124 Identities=10% Similarity=0.094 Sum_probs=85.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|+++|+++.++|+.....+..+.+.+|+... ...++.+.... ...-
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~------f~~~~~~~~~~----------------~~Kp 162 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRV------LDSCLSADDLK----------------IYKP 162 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG------CSEEEEGGGTT----------------CCTT
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHH------cCEEEEccccC----------------CCCC
Confidence 4679999999999999999999999999999999999998642 11222222211 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccE---EecCCCcHHHHhcc-CEEeccCCchHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGL---SMGIQGTEVAKESS-DIVIMDDNFSSVVTVL 712 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI---am~~~~~~~a~~~a-d~vl~~~~~~~i~~~i 712 (941)
.|+--..+.+.+.-..+.++++||+.||+.|.+.||+.. ..+ +..+..+..+ |+++. ++..+..++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l 232 (240)
T 2no4_A 163 DPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQ-GNPPEYEFAPLKHQVN--SLSELWPLL 232 (240)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTT-CCCCCCTTSCCSEEES--SGGGHHHHH
T ss_pred CHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCC-CCCCcccCCCCceeeC--CHHHHHHHH
Confidence 333444555555545668999999999999999999654 334 2223334557 88886 677777655
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=1.5e-05 Score=80.94 Aligned_cols=136 Identities=16% Similarity=0.121 Sum_probs=84.2
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCC---------------HHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHH
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDN---------------VHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAE 628 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~ 628 (941)
++.+++.++++.|+++|+++.++|+.. ...+..+.+++|+... ..+..+........+
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~-------~~~~~~~~~~~~~~~ 122 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD-------GIYYCPHHPQGSVEE 122 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS-------EEEEECCBTTCSSGG
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceE-------EEEECCcCCCCcccc
Confidence 678999999999999999999999999 4677888888888521 111110000000000
Q ss_pred HHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc--EEe--cCCCcHHHHhccCEEeccCC
Q 047874 629 ERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG--LSM--GIQGTEVAKESSDIVIMDDN 704 (941)
Q Consensus 629 ~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg--Iam--~~~~~~~a~~~ad~vl~~~~ 704 (941)
.........-.|+--..+.+.+.-..+.+++|||+.||..+.+.||+. |.+ |....+.....+|+++. +
T Consensus 123 -----~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~--~ 195 (211)
T 2gmw_A 123 -----FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--S 195 (211)
T ss_dssp -----GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--C
T ss_pred -----cCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeC--C
Confidence 000000111223333445555554556899999999999999999964 444 32122333456899886 6
Q ss_pred chHHHHHHH
Q 047874 705 FSSVVTVLR 713 (941)
Q Consensus 705 ~~~i~~~i~ 713 (941)
+..+.+++.
T Consensus 196 l~el~~~l~ 204 (211)
T 2gmw_A 196 LADLPQAIK 204 (211)
T ss_dssp GGGHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776664
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.95 E-value=4.9e-05 Score=78.65 Aligned_cols=125 Identities=18% Similarity=0.157 Sum_probs=85.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+... ...++.+..... ..-
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~------f~~~~~~~~~~~----------------~Kp 151 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDF------FEHVIISDFEGV----------------KKP 151 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGG------CSEEEEGGGGTC----------------CTT
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhh------ccEEEEeCCCCC----------------CCC
Confidence 3568999999999999999999999999989999999997531 122222221110 111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhCCccEEe---cCCCcHHHHh---ccCEEeccCCchHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAADIGLSM---GIQGTEVAKE---SSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~vgIam---~~~~~~~a~~---~ad~vl~~~~~~~i~~~i~ 713 (941)
.|+--..+.+.+.-..+.++++||+. ||..|.+.||++++. | .+...... .+|+++. ++..+..++.
T Consensus 152 ~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 225 (241)
T 2hoq_A 152 HPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEID--NLESLLEVLA 225 (241)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEES--STTHHHHHHH
T ss_pred CHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEEC--CHHHHHHHHH
Confidence 23333344455544466899999998 999999999997554 3 33333332 6899886 6777776654
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.93 E-value=7.9e-06 Score=85.76 Aligned_cols=127 Identities=13% Similarity=0.069 Sum_probs=88.2
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccc-eecchhcccCCHHHHHHhhcCceEEEec
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEA-VIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ... ++.+..... ...-
T Consensus 111 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~------f~~~i~~~~~~~~---------------~~Kp 169 (259)
T 4eek_A 111 AIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTEL------AGEHIYDPSWVGG---------------RGKP 169 (259)
T ss_dssp ECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHH------HCSCEECGGGGTT---------------CCTT
T ss_pred cCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhh------ccceEEeHhhcCc---------------CCCC
Confidence 468999999999999999999999999999999999987531 111 222222110 0111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCC-------cHH-HHhccCEEeccCCchHHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQG-------TEV-AKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~-------~~~-a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.|+--..+.+.+.-..+.+++|||+.||+.|.+.||++ |.+. .+ .+. .+..+|+++. ++..+.++++.
T Consensus 170 ~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~--~l~el~~~l~~ 246 (259)
T 4eek_A 170 HPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLT--SHAELRAALAE 246 (259)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEEC--SHHHHHHHHHH
T ss_pred ChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhC--CHHHHHHHHHh
Confidence 23333344444444457899999999999999999998 5554 33 223 3355999987 88888888765
Q ss_pred H
Q 047874 715 G 715 (941)
Q Consensus 715 g 715 (941)
.
T Consensus 247 ~ 247 (259)
T 4eek_A 247 A 247 (259)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=7.1e-06 Score=85.53 Aligned_cols=51 Identities=24% Similarity=0.265 Sum_probs=41.3
Q ss_pred HHHHHHHHHHhCCCEEEEEcC----CccCHHHHHhCC-ccEEecCCCcHHHHhccCE
Q 047874 647 DKLLMVQSLKQKGHVVAVTGD----GTNDAPALRAAD-IGLSMGIQGTEVAKESSDI 698 (941)
Q Consensus 647 ~K~~iv~~l~~~g~~v~~iGD----g~ND~~~l~~A~-vgIam~~~~~~~a~~~ad~ 698 (941)
+|+..++.+.+..+.|+++|| |.||.+||+.|+ +|++|+ |+.+..+..+++
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~~~~~ 242 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAEVEKI 242 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHHHHHH
Confidence 677766666665678999999 699999999996 899999 888887765543
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.92 E-value=1e-05 Score=83.81 Aligned_cols=138 Identities=12% Similarity=0.110 Sum_probs=89.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHH--hhcCceEEE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIA--KIESIRVMA 641 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~v~~ 641 (941)
++.|++.++++.|+++|+++.++|+.+...+..+.+ |+... ..++.+.....- ..+.. .-+....+.
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-------~~v~~~~~~~~~--~~~~~~~~kp~p~~~~ 145 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-------DRIYCNHASFDN--DYIHIDWPHSCKGTCS 145 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-------GGEEEEEEECSS--SBCEEECTTCCCTTCC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-------CeEEeeeeEEcC--CceEEecCCCCccccc
Confidence 578999999999999999999999999988888887 76431 123322211100 00000 000000001
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhc--cCEEeccCCchHHHHHHHHH
Q 047874 642 RSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKES--SDIVIMDDNFSSVVTVLRWG 715 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~--ad~vl~~~~~~~i~~~i~~g 715 (941)
+.....|..+++.+....+.++++||+.||+++.+.||+.++.. ...+..... +|+++. ++..+..++...
T Consensus 146 ~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~--~~~el~~~l~~~ 218 (236)
T 2fea_A 146 NQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQ--DFYEIRKEIENV 218 (236)
T ss_dssp SCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCS--SHHHHHHHHHTS
T ss_pred cccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeecC--CHHHHHHHHHHh
Confidence 11234688888888777889999999999999999999988753 222233333 677764 788887776543
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.88 E-value=2.5e-05 Score=80.41 Aligned_cols=121 Identities=11% Similarity=0.058 Sum_probs=85.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|+ .|+++.++|+.....+....+.+|+... ...++.+..... ..-
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~------f~~~~~~~~~~~----------------~kp 163 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRY------FKKIILSEDLGV----------------LKP 163 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGG------CSEEEEGGGTTC----------------CTT
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhh------ceeEEEeccCCC----------------CCC
Confidence 46789999999999 9999999999999999999999988642 112222221110 111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhCCccEEecCCCcH--HHHhccCEEeccCCchHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAADIGLSMGIQGTE--VAKESSDIVIMDDNFSSVVT 710 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~vgIam~~~~~~--~a~~~ad~vl~~~~~~~i~~ 710 (941)
.|+--..+.+.+.-..+.+++|||+. ||..|.+.||++++|. +... ..+..+|+++. ++..+..
T Consensus 164 ~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~d~vi~--sl~e~~~ 230 (240)
T 3qnm_A 164 RPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFY-NVTERTVFPFQPTYHIH--SLKELMN 230 (240)
T ss_dssp SHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEE-CCSCCCCCSSCCSEEES--STHHHHH
T ss_pred CHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEE-cCCCCCCcCCCCceEEC--CHHHHHH
Confidence 22333334444443456899999995 9999999999999998 4443 45667999997 6677663
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.86 E-value=1.7e-05 Score=81.17 Aligned_cols=118 Identities=10% Similarity=0.088 Sum_probs=81.2
Q ss_pred CCCcchHHHHHHHHhcC-CeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVESCRNAG-VNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aG-i~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
++.+++.+.++.|+++| +++.++|+..........+.+|+.... .. +++.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f------~~-----------------------~~~~ 155 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF------DH-----------------------IEVM 155 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC------SE-----------------------EEEE
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh------he-----------------------eeec
Confidence 45789999999999999 999999999998889999999885321 01 2222
Q ss_pred cCH--HHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhCCccEEecC------CCcHHHHhcc-CEEeccCCchHHHHHH
Q 047874 643 SSP--LDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAADIGLSMGI------QGTEVAKESS-DIVIMDDNFSSVVTVL 712 (941)
Q Consensus 643 ~~p--~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~vgIam~~------~~~~~a~~~a-d~vl~~~~~~~i~~~i 712 (941)
..| +--..+.+.+.-..+.++++||+. ||..|.+.||+++++-. ++....+..+ |+++. ++..+..++
T Consensus 156 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~--~l~el~~~l 233 (234)
T 3ddh_A 156 SDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVK--RLDDLLSLL 233 (234)
T ss_dssp SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECS--SGGGHHHHC
T ss_pred CCCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecc--cHHHHHHhc
Confidence 222 323334444443457899999996 99999999999888721 2333323344 88876 667666543
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.84 E-value=2.1e-05 Score=78.96 Aligned_cols=122 Identities=8% Similarity=0.107 Sum_probs=84.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.+ ++.|++. +++.++|+.+...+..+.+.+|+... ...++.+.... ...-
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~------f~~~~~~~~~~----------------~~Kp 129 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRY------FKGIFSAESVK----------------EYKP 129 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGG------CSEEEEGGGGT----------------CCTT
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHh------CcEEEehhhcC----------------CCCC
Confidence 45689999 9999999 99999999999999999999998531 12223222211 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecC---CCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGI---QGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~---~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
.|+--..+.+.+. .+.++++||+.||..|.+.||++.++-. ++.+..+..+|+++. ++..+..++.
T Consensus 130 ~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 198 (201)
T 2w43_A 130 SPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEWIL 198 (201)
T ss_dssp CHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHHHH
T ss_pred CHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHHHH
Confidence 3444445556565 5789999999999999999999977621 222333456888876 6777766553
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.82 E-value=2e-05 Score=81.64 Aligned_cols=122 Identities=12% Similarity=0.134 Sum_probs=81.9
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.+++.+.++.|+++|+++.++|+.+...+..+.+.+|+. . ...++.+.... ...-.
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~------f~~~~~~~~~~----------------~~Kp~ 167 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S------FDFALGEKSGI----------------RRKPA 167 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T------CSEEEEECTTS----------------CCTTS
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c------eeEEEecCCCC----------------CCCCC
Confidence 4589999999999999999999999988888899999875 2 11222222110 01112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc---EEecCCCc-HHHH-hccCEEeccCCchHHHHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG---LSMGIQGT-EVAK-ESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg---Iam~~~~~-~~a~-~~ad~vl~~~~~~~i~~~i 712 (941)
|+-=..+.+.+.-..+.+++|||+.||+.|.+.||+. +++| ++. +..+ ..+|+++. ++..+...+
T Consensus 168 p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~-~~~~~~~~~~~a~~~~~--~~~el~~~l 237 (240)
T 2hi0_A 168 PDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWG-FRSVPFLQKHGATVIVD--TAEKLEEAI 237 (240)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSS-SSCHHHHHHTTCCCEEC--SHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCC-CCchhHHHhcCCCEEEC--CHHHHHHHh
Confidence 2222344444444467899999999999999999994 4444 333 3333 46898886 566666544
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.80 E-value=2.7e-06 Score=86.08 Aligned_cols=120 Identities=12% Similarity=0.160 Sum_probs=81.2
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+... ...++.+.... ...-
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~------f~~~~~~~~~~----------------~~KP 139 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMR------MAVTISADDTP----------------KRKP 139 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGG------EEEEECGGGSS----------------CCTT
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhh------ccEEEecCcCC----------------CCCC
Confidence 3578999999999999 99999999999988889888887531 11222222110 0011
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecC--C-CcHHHHhccCEEeccCCchHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGI--Q-GTEVAKESSDIVIMDDNFSSVV 709 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~--~-~~~~a~~~ad~vl~~~~~~~i~ 709 (941)
.|+--..+.+.+.-..+.++++||+.||.+|.+.||+++++.. . +.+..++ +|+++. ++..+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~ 205 (209)
T 2hdo_A 140 DPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDIL 205 (209)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGG
T ss_pred CcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHH
Confidence 1333344445554445789999999999999999999998742 1 2344445 999986 444443
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.80 E-value=2.3e-05 Score=83.22 Aligned_cols=114 Identities=18% Similarity=0.118 Sum_probs=80.4
Q ss_pred CCcchHHHHHHHHhc-CCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 565 CRPGVRAAVESCRNA-GVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 565 ~~~~~~~~I~~l~~a-Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+... ..++.+..... ...
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~f-------~~i~~~~~~~~----------------~kp 171 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKRP-------EYFITANDVKQ----------------GKP 171 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCCC-------SSEECGGGCSS----------------CTT
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCcc-------CEEEEcccCCC----------------CCC
Confidence 468999999999999 999999999999999999999987531 23333332211 011
Q ss_pred CHHHHHHHHHHHHh-------CCCEEEEEcCCccCHHHHHhCCccEEe---cCCCcHHHH-hccCEEecc
Q 047874 644 SPLDKLLMVQSLKQ-------KGHVVAVTGDGTNDAPALRAADIGLSM---GIQGTEVAK-ESSDIVIMD 702 (941)
Q Consensus 644 ~p~~K~~iv~~l~~-------~g~~v~~iGDg~ND~~~l~~A~vgIam---~~~~~~~a~-~~ad~vl~~ 702 (941)
.|+--..+.+.+.- ..+.|+++||+.||.+|++.||+++++ + ++.+..+ ..||+++.+
T Consensus 172 ~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~-~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 172 HPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATT-FDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp SSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSS-SCHHHHTTSSCSEEESS
T ss_pred ChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCC-CCHHHHhhCCCCEEECC
Confidence 23333445555554 556799999999999999999977665 4 3333333 358999864
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.80 E-value=3.4e-05 Score=80.59 Aligned_cols=123 Identities=14% Similarity=0.155 Sum_probs=87.2
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|+ |+++.++|+.+...+..+.+.+|+... ...++.+.... ...-
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~------f~~~~~~~~~~----------------~~Kp 148 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS------FDAVISVDAKR----------------VFKP 148 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG------CSEEEEGGGGT----------------CCTT
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhh------ccEEEEccccC----------------CCCC
Confidence 56799999999999 999999999999999999999997531 11222222211 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCC---------------------------cHHHHhcc
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQG---------------------------TEVAKESS 696 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~---------------------------~~~a~~~a 696 (941)
.|+--..+.+.+.-..+.++++||+.||..|.+.||++.++. +. .+..+..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 227 (253)
T 1qq5_A 149 HPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARV-ARLSQEALARELVSGTIAPLTMFKALRMREETYAEAP 227 (253)
T ss_dssp SHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEE-CCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCC
T ss_pred CHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEE-CCcccchhhhhcccccccccccccccccccCCCCCCC
Confidence 333444455555444568999999999999999999998887 44 12234568
Q ss_pred CEEeccCCchHHHHHHH
Q 047874 697 DIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 697 d~vl~~~~~~~i~~~i~ 713 (941)
|+++. ++..+..++.
T Consensus 228 ~~~~~--~~~el~~~l~ 242 (253)
T 1qq5_A 228 DFVVP--ALGDLPRLVR 242 (253)
T ss_dssp SEEES--SGGGHHHHHH
T ss_pred CeeeC--CHHHHHHHHH
Confidence 99886 6777776664
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.78 E-value=8.3e-06 Score=85.07 Aligned_cols=120 Identities=13% Similarity=0.143 Sum_probs=76.3
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH-cCCCCCCCCCCcccceecch--hcccCCHHHHHHhhcCceEE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIE-CGILNPDVDLNKDEAVIEGV--QFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~v~ 640 (941)
.+.+++.+.++.|++.|+++.++|+...........+ .|+... ...++.+. ....
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~------f~~~~~~~~~~~~~---------------- 169 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL------FSHIVLGDDPEVQH---------------- 169 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT------SSCEECTTCTTCCS----------------
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh------eeeEEecchhhccC----------------
Confidence 4678999999999999999999999987655543322 333221 11222222 1100
Q ss_pred EecCHHHHHHHHHHHHhCC--CEEEEEcCCccCHHHHHhCC---ccEEecCCCcHHHHhccCEEeccCCchHH
Q 047874 641 ARSSPLDKLLMVQSLKQKG--HVVAVTGDGTNDAPALRAAD---IGLSMGIQGTEVAKESSDIVIMDDNFSSV 708 (941)
Q Consensus 641 ~~~~p~~K~~iv~~l~~~g--~~v~~iGDg~ND~~~l~~A~---vgIam~~~~~~~a~~~ad~vl~~~~~~~i 708 (941)
..-.|+--..+.+.+.-.. +.+++|||+.||+.|.+.|| ++|++| ++.+..+..||+++. ++..+
T Consensus 170 ~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~--sl~el 239 (250)
T 3l5k_A 170 GKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLN--SLQDF 239 (250)
T ss_dssp CTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECS--CGGGC
T ss_pred CCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeec--CHHHh
Confidence 0111222222333322223 78999999999999999999 566667 666678889999987 44444
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.77 E-value=6.6e-05 Score=76.68 Aligned_cols=125 Identities=14% Similarity=0.149 Sum_probs=82.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.++. ++.++|+........+.+++|+...- ...+..+.....- . ...
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~~~~------------~--~kp 144 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYF-----APHIYSAKDLGAD------------R--VKP 144 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGT-----TTCEEEHHHHCTT------------C--CTT
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhc-----cceEEeccccccC------------C--CCc
Confidence 346788888888774 89999999999999999999875310 0122222211000 0 011
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCcH-------HHHhc-cCEEeccCCchHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGTE-------VAKES-SDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~-------~a~~~-ad~vl~~~~~~~i~~~i~ 713 (941)
.|+--..+.+.+.-..+.++++||+.||.+|++.||++ |+++ ++.. ..++. ||+++. ++..+.++++
T Consensus 145 k~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 220 (229)
T 2fdr_A 145 KPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS--RMQDLPAVIA 220 (229)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHHH
T ss_pred CHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeec--CHHHHHHHHH
Confidence 22333444455544457899999999999999999998 7776 5443 35666 999986 5666766553
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.77 E-value=3.1e-05 Score=80.65 Aligned_cols=123 Identities=14% Similarity=0.121 Sum_probs=86.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|++. +++.++|+........+.+.+|+.. ..++.+.... ...-
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f--------~~~~~~~~~~----------------~~kp 174 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW--------DMLLCADLFG----------------HYKP 174 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC--------SEECCHHHHT----------------CCTT
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc--------ceEEeecccc----------------cCCC
Confidence 4568999999999986 9999999999999999999999852 1222221110 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecC----CC---cHHH--HhccCEEeccCCchHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGI----QG---TEVA--KESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~----~~---~~~a--~~~ad~vl~~~~~~~i~~~i~ 713 (941)
.|+--..+.+.+.-..+.|++|||+.||+.|.+.||++++|.. .+ .+.. +..+|+++. ++..+..++.
T Consensus 175 ~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~--~l~el~~~l~ 251 (254)
T 3umc_A 175 DPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIAS--DLLDLHRQLA 251 (254)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEES--SHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEEC--CHHHHHHHhc
Confidence 2333344455554446789999999999999999999999983 12 1222 667899987 7787776663
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.73 E-value=5.3e-05 Score=77.88 Aligned_cols=125 Identities=11% Similarity=0.080 Sum_probs=85.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|++. +++.++|+.....+....+.+|+... ...++.+..... ..-
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~------f~~~~~~~~~~~----------------~kp 159 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPF------FKDIFVSEDTGF----------------QKP 159 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGG------CSEEEEGGGTTS----------------CTT
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhh------hheEEEecccCC----------------CCC
Confidence 5678999999999999 99999999999999999999988642 112222221110 011
Q ss_pred CHHHHHHHHHHHH-hCCCEEEEEcCCc-cCHHHHHhCCcc-EEecCCC--cHHHHhccCEEeccCCchHHHHHHHH
Q 047874 644 SPLDKLLMVQSLK-QKGHVVAVTGDGT-NDAPALRAADIG-LSMGIQG--TEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 644 ~p~~K~~iv~~l~-~~g~~v~~iGDg~-ND~~~l~~A~vg-Iam~~~~--~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.|+--..+.+.+. -..+.+++|||+. ||+.|.+.||++ |.++ .+ .+..+..+|+++. ++..+.++++.
T Consensus 160 ~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~ad~v~~--~~~el~~~l~~ 232 (238)
T 3ed5_A 160 MKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMN-PDMKPNVPEIIPTYEIR--KLEELYHILNI 232 (238)
T ss_dssp CHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEEC-TTCCCCTTCCCCSEEES--SGGGHHHHHTC
T ss_pred ChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEEC-CCCCCCcccCCCCeEEC--CHHHHHHHHHh
Confidence 2222233333333 2346899999998 999999999995 4444 33 4456678999987 77888877643
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.73 E-value=3.4e-05 Score=78.18 Aligned_cols=114 Identities=15% Similarity=0.140 Sum_probs=78.5
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.|++.+.++.|++ |+++.++|+.+...+....+.+|+...- ..+ +.+...
T Consensus 85 ~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f------~~i----------------------~~~~~~ 135 (210)
T 2ah5_A 85 LFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF------DGI----------------------YGSSPE 135 (210)
T ss_dssp ECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC------SEE----------------------EEECSS
T ss_pred CCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe------eee----------------------ecCCCC
Confidence 56899999999999 9999999999988888889999986421 111 112111
Q ss_pred HHHHHHHHHHH-Hh---CCCEEEEEcCCccCHHHHHhCCc---cEEecCCC-cHHHH-hccCEEeccCCchHHHH
Q 047874 645 PLDKLLMVQSL-KQ---KGHVVAVTGDGTNDAPALRAADI---GLSMGIQG-TEVAK-ESSDIVIMDDNFSSVVT 710 (941)
Q Consensus 645 p~~K~~iv~~l-~~---~g~~v~~iGDg~ND~~~l~~A~v---gIam~~~~-~~~a~-~~ad~vl~~~~~~~i~~ 710 (941)
+.-|.++.+.. ++ ..+.+++|||+.||+.|.++||+ ++++| ++ .+..+ ..+|+++. ++..+..
T Consensus 136 ~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~-~~~~~~l~~~~a~~v~~--~~~el~~ 207 (210)
T 2ah5_A 136 APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWG-FGEQADLLNYQPDYIAH--KPLEVLA 207 (210)
T ss_dssp CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SSCHHHHHTTCCSEEES--STTHHHH
T ss_pred CCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEEC--CHHHHHH
Confidence 12233333332 22 34679999999999999999999 67776 44 33343 36899986 4555543
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.73 E-value=4.4e-05 Score=75.54 Aligned_cols=107 Identities=19% Similarity=0.108 Sum_probs=71.5
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.+++.+.++.|++.|+++.++|+... .+....+.+|+... ...++.+..... ....
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~------f~~~~~~~~~~~----------------~kp~ 139 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAY------FTEVVTSSSGFK----------------RKPN 139 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGG------EEEEECGGGCCC----------------CTTS
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhh------eeeeeeccccCC----------------CCCC
Confidence 568999999999999999999999864 56777888887531 112222221100 0112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccC
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSD 697 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad 697 (941)
|+--..+.+.+.-. .++++||+.||.+|.+.||+++++. +.....++..+
T Consensus 140 ~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~l~ 189 (190)
T 2fi1_A 140 PESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 189 (190)
T ss_dssp CHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred HHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEE-CCCCChhhccC
Confidence 22223333333322 7999999999999999999998887 56665555544
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.72 E-value=6.1e-05 Score=78.21 Aligned_cols=123 Identities=16% Similarity=0.115 Sum_probs=86.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|++. +++.++|+........+.+.+|+... .++.+..... ..-
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~--------~~~~~~~~~~----------------~kp 170 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD--------VIIGSDINRK----------------YKP 170 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS--------CCCCHHHHTC----------------CTT
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee--------EEEEcCcCCC----------------CCC
Confidence 5678999999999997 99999999999999999999998521 1222211110 011
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcH--------H--HHhccCEEeccCCchHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTE--------V--AKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~--------~--a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
.|+--..+.+.+.-..+.+++|||+.||..|.+.||++++|. +... . .+..+|+++. ++..+..++.
T Consensus 171 ~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~g~~~~~~~~~~~~~d~~~~--~~~el~~~l~ 247 (254)
T 3umg_A 171 DPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFI-LRPVEHGPHQTDDLAPTGSWDISAT--DITDLAAQLR 247 (254)
T ss_dssp SHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEE-CCTTTTCTTCCSCSSCSSCCSEEES--SHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEE-ecCCcCCCCccccccccCCCceEEC--CHHHHHHHhc
Confidence 222222333333333568999999999999999999999998 4211 1 3567899987 8888888775
Q ss_pred H
Q 047874 714 W 714 (941)
Q Consensus 714 ~ 714 (941)
.
T Consensus 248 ~ 248 (254)
T 3umg_A 248 A 248 (254)
T ss_dssp H
T ss_pred C
Confidence 4
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.68 E-value=3.8e-05 Score=78.95 Aligned_cols=122 Identities=10% Similarity=0.110 Sum_probs=83.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.++++.|++ |+++.++|+..........+.++-. ...++.+.+.. ...-
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~--------fd~i~~~~~~~----------------~~KP 153 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE--------FDHIITAQDVG----------------SYKP 153 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC--------CSEEEEHHHHT----------------SCTT
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc--------cCEEEEccccC----------------CCCC
Confidence 567999999999999 8999999999988877776664421 12222222211 1122
Q ss_pred CHHHHHHHHHHHH---hCCCEEEEEcCCc-cCHHHHHhCCccEEecCCCc-----------HHHHhccCEEeccCCchHH
Q 047874 644 SPLDKLLMVQSLK---QKGHVVAVTGDGT-NDAPALRAADIGLSMGIQGT-----------EVAKESSDIVIMDDNFSSV 708 (941)
Q Consensus 644 ~p~~K~~iv~~l~---~~g~~v~~iGDg~-ND~~~l~~A~vgIam~~~~~-----------~~a~~~ad~vl~~~~~~~i 708 (941)
+|+-....++.++ -..+.+++|||+. ||+.|.+.||++++|. +.. +..+..+|+++. ++..+
T Consensus 154 ~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~-~~~~~~~g~g~~~~~~~~~~ad~v~~--~~~el 230 (240)
T 3smv_A 154 NPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWI-YRRHGKEGYGATHVPSRMPNVDFRFN--SMGEM 230 (240)
T ss_dssp SHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEE-CTTCC-------CCCSSCCCCSEEES--SHHHH
T ss_pred CHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEE-cCCCcccCCCCCCCCcCCCCCCEEeC--CHHHH
Confidence 3444445533333 3356899999996 9999999999999985 322 234578999997 77777
Q ss_pred HHHHH
Q 047874 709 VTVLR 713 (941)
Q Consensus 709 ~~~i~ 713 (941)
.++++
T Consensus 231 ~~~l~ 235 (240)
T 3smv_A 231 AEAHK 235 (240)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77664
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.67 E-value=2.6e-05 Score=82.10 Aligned_cols=125 Identities=13% Similarity=0.160 Sum_probs=87.3
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.+++.++++.|++.|+++.++|+.... ...+.+.+|+... ...++.+.... ...-.
T Consensus 107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~------f~~~~~~~~~~----------------~~Kp~ 163 (263)
T 3k1z_A 107 VLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREH------FDFVLTSEAAG----------------WPKPD 163 (263)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGG------CSCEEEHHHHS----------------SCTTS
T ss_pred ECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHh------hhEEEeecccC----------------CCCCC
Confidence 5689999999999999999999997764 6788888998532 11222222111 11223
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhCCccEEecCCCcHH-----HHhccCEEeccCCchHHHHHHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAADIGLSMGIQGTEV-----AKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~vgIam~~~~~~~-----a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
|+--..+.+.+.-..+.+++|||+. ||+.|.+.||+++++...+... ....+|+++. ++..+..++..
T Consensus 164 ~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~--~l~el~~~l~~ 237 (263)
T 3k1z_A 164 PRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILP--SLAHLLPALDC 237 (263)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEES--SGGGHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeC--CHHHHHHHHHH
Confidence 4445555666655567899999997 9999999999999987333211 2236899886 77777777654
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.66 E-value=5.3e-05 Score=75.25 Aligned_cols=92 Identities=9% Similarity=-0.015 Sum_probs=65.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCC-HHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDN-VHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
++.|++.++++.|+++|++++++||++ ...+..+.+.+|+...- ..+ .+...
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f------~~~---------------------~~~~~ 120 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYF------VHR---------------------EIYPG 120 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTE------EEE---------------------EESSS
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhc------cee---------------------EEEeC
Confidence 578999999999999999999999999 78999999999986420 000 00001
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccE
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGL 682 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 682 (941)
..|+.-..+.+.+.-..+.+++|||+.+|+.+.++||+..
T Consensus 121 ~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~ 160 (187)
T 2wm8_A 121 SKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTC 160 (187)
T ss_dssp CHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred chHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEE
Confidence 1122222333333333567999999999999999999854
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0002 Score=74.51 Aligned_cols=118 Identities=15% Similarity=0.127 Sum_probs=82.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
.+.+++.+.++.|+ .|+++.++|+.....+....+.+|+...- .. +++..
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f------~~-----------------------i~~~~ 161 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF------PR-----------------------IEVVS 161 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC------CC-----------------------EEEES
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC------ce-----------------------eeeeC
Confidence 45789999999999 99999999999998888888888875310 01 22222
Q ss_pred --CHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhCCccEEecCCCcH--------HHHhccCE-EeccCCchHHHHH
Q 047874 644 --SPLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAADIGLSMGIQGTE--------VAKESSDI-VIMDDNFSSVVTV 711 (941)
Q Consensus 644 --~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~vgIam~~~~~~--------~a~~~ad~-vl~~~~~~~i~~~ 711 (941)
.|+--..+.+.+.-..+.|++|||+. ||..|.+.||+++++-..+.. .....+|+ ++. ++..+..+
T Consensus 162 kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 239 (251)
T 2pke_A 162 EKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVP--DPSGWPAA 239 (251)
T ss_dssp CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECS--SGGGHHHH
T ss_pred CCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeC--CHHHHHHH
Confidence 23433445555554567899999999 999999999999775423321 11245787 665 67777766
Q ss_pred HH
Q 047874 712 LR 713 (941)
Q Consensus 712 i~ 713 (941)
++
T Consensus 240 l~ 241 (251)
T 2pke_A 240 VR 241 (251)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.60 E-value=5.6e-05 Score=79.74 Aligned_cols=44 Identities=11% Similarity=0.048 Sum_probs=37.4
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcC---CCHHHHHHHHHHcCCCC
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTG---DNVHTARAIAIECGILN 605 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TG---d~~~~a~~ia~~~gi~~ 605 (941)
.+.+-++++++|++++++|++++++|| ++........+++|+..
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~ 68 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEV 68 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCC
Confidence 344567899999999999999999999 77777778888888864
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00026 Score=70.27 Aligned_cols=136 Identities=11% Similarity=0.086 Sum_probs=91.4
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCH---HHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceE
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNV---HTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRV 639 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~---~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 639 (941)
-++.+++.++++.|+++|+++.++|+... ..+..+.+.+|+... ...++.+.+.... .-
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~------fd~i~~~~~~~~~------------~~ 94 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDY------FDFIYASNSELQP------------GK 94 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGG------EEEEEECCTTSST------------TC
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhh------eEEEEEccccccc------------cC
Confidence 35789999999999999999999998876 888999999998641 1112211110000 00
Q ss_pred EEecCHHHHHHHHHHHHhCCCEEEEEcCC-ccCHHHHHhCCcc-EEecCCCcH-----HHH-hccCEEeccCCchHHHHH
Q 047874 640 MARSSPLDKLLMVQSLKQKGHVVAVTGDG-TNDAPALRAADIG-LSMGIQGTE-----VAK-ESSDIVIMDDNFSSVVTV 711 (941)
Q Consensus 640 ~~~~~p~~K~~iv~~l~~~g~~v~~iGDg-~ND~~~l~~A~vg-Iam~~~~~~-----~a~-~~ad~vl~~~~~~~i~~~ 711 (941)
...-.|+--..+.+.+.-..+.+++|||+ .+|+.+-+.||+. |.+. ++.. ... ..+|+++...++..+.++
T Consensus 95 ~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~-~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~ 173 (189)
T 3ib6_A 95 MEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQ-NPEVCLQDERLPLVAPPFVIPVWDLADVPEA 173 (189)
T ss_dssp CCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEEC-CTTTCBCSSCCCBCSSSCEEEESSGGGHHHH
T ss_pred CCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEEC-CccccccccccccCCCcceeccccHHhHHHH
Confidence 11123444445556555556789999999 7999999999996 4443 3221 111 267888887788888888
Q ss_pred HHHHHH
Q 047874 712 LRWGRC 717 (941)
Q Consensus 712 i~~gR~ 717 (941)
++..+.
T Consensus 174 l~l~~~ 179 (189)
T 3ib6_A 174 LLLLKK 179 (189)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766543
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00016 Score=76.03 Aligned_cols=43 Identities=14% Similarity=0.076 Sum_probs=36.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcC---CCHHHHHHHHHHcCCCCC
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTG---DNVHTARAIAIECGILNP 606 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TG---d~~~~a~~ia~~~gi~~~ 606 (941)
.+-++++++|++++++|++++++|| ++........+++|+...
T Consensus 22 ~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~ 67 (266)
T 3pdw_A 22 EKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT 67 (266)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC
T ss_pred EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 3457899999999999999999988 777888888889998643
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00042 Score=70.07 Aligned_cols=125 Identities=18% Similarity=0.262 Sum_probs=84.4
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.|++.++++.|++.|+++.++|+.+...+....+.+|+... .+.++.+.+... ..-.
T Consensus 85 ~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~------fd~~~~~~~~~~----------------~KP~ 142 (216)
T 3kbb_A 85 ENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKY------FDVMVFGDQVKN----------------GKPD 142 (216)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG------CSEEECGGGSSS----------------CTTS
T ss_pred cCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCcc------ccccccccccCC----------------Cccc
Confidence 468999999999999999999999999999999999998642 122333322211 1223
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-E---EecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-L---SMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-I---am~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
|+-=..+.+.+.-..+.+++|||+.+|+.+-++||+. | .-|.+..+...++.+..+. +.+.+.+.++
T Consensus 143 p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~--~~~eli~~l~ 213 (216)
T 3kbb_A 143 PEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV--KPEEILNVLK 213 (216)
T ss_dssp THHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE--CGGGHHHHHH
T ss_pred HHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC--CHHHHHHHHH
Confidence 4444455566655567899999999999999999984 2 2233334444454333333 3455665554
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=4.1e-05 Score=80.60 Aligned_cols=58 Identities=19% Similarity=0.291 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhC--CCEEEEEcC----CccCHHHHHhCC-ccEEecCCCcHHHHhccCEEeccCCc
Q 047874 646 LDKLLMVQSLKQK--GHVVAVTGD----GTNDAPALRAAD-IGLSMGIQGTEVAKESSDIVIMDDNF 705 (941)
Q Consensus 646 ~~K~~iv~~l~~~--g~~v~~iGD----g~ND~~~l~~A~-vgIam~~~~~~~a~~~ad~vl~~~~~ 705 (941)
.+|...++.+ .. .+.|+++|| +.||.+||+.|+ +|++|+ |+.+..|+.||+++.+++.
T Consensus 196 vsKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~~~ 260 (262)
T 2fue_A 196 WDKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPETAH 260 (262)
T ss_dssp CSTTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC--
T ss_pred CCHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCCcC
Confidence 4788888888 22 468999999 999999999999 599998 9999999999999887654
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00022 Score=71.14 Aligned_cols=99 Identities=12% Similarity=0.039 Sum_probs=72.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|++.| ++.++|+.+......+.+.+|+... ...++.+.... ...-
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~------f~~~~~~~~~~----------------~~Kp 142 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEF------LLAFFTSSALG----------------VMKP 142 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGT------CSCEEEHHHHS----------------CCTT
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHh------cceEEeecccC----------------CCCC
Confidence 36699999999999999 9999999999999999999987532 11222222110 1112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEec
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMG 685 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~ 685 (941)
.|+--..+.+.+.-..+.++++||+.||..|.+.||+...+-
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 143 NPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred CHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 344444555555545678999999999999999999988775
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.36 E-value=7.7e-05 Score=76.09 Aligned_cols=108 Identities=19% Similarity=0.125 Sum_probs=65.7
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCCcccceecchhcccCCH
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNV---------------HTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSA 627 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~ 627 (941)
.++.+++.++++.|+++|+++.++|+... ..+..+.+++|+..... ..+..+.. ..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----~~~~~~~~-g~~~- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMV-----LACAYHEA-GVGP- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEE-----EEECCCTT-CCST-
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceeeE-----EEeecCCC-Ccee-
Confidence 46789999999999999999999999988 67788888888742100 00000000 0000
Q ss_pred HHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccE
Q 047874 628 EERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGL 682 (941)
Q Consensus 628 ~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 682 (941)
+ .... .....-.|.-=..+.+.+.-..+.++||||+.||+.+.+.|++..
T Consensus 128 -~---~~~~-~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 -L---AIPD-HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp -T---CCSS-CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred -e---cccC-CccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 0 0000 000001122222333444334567999999999999999999864
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.34 E-value=8e-05 Score=75.12 Aligned_cols=102 Identities=10% Similarity=-0.021 Sum_probs=70.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH------cCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCc
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIE------CGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESI 637 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~------~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 637 (941)
++.+++.+.++.|++ |++++++|+.....+..+.+. .|+... ...++.+....
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~------f~~~~~~~~~~-------------- 147 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSF------FDKVYASCQMG-------------- 147 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGG------SSEEEEHHHHT--------------
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHH------cCeEEeecccC--------------
Confidence 356899999999999 999999999998887777776 565321 11222221110
Q ss_pred eEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCc
Q 047874 638 RVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGT 689 (941)
Q Consensus 638 ~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~ 689 (941)
...-.|+--..+.+.+.-..+.++++||+.||..|.+.||++.++. ++.
T Consensus 148 --~~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~-~~~ 196 (211)
T 2i6x_A 148 --KYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCP-DNG 196 (211)
T ss_dssp --CCTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECC-CTT
T ss_pred --CCCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEE-CCH
Confidence 0112333444555555545678999999999999999999999887 443
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00082 Score=70.42 Aligned_cols=123 Identities=14% Similarity=0.154 Sum_probs=85.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.++++.|++ |+++.++|+.+...+..+.+.+|+... ...++.+.+.. ...-
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~------f~~i~~~~~~~----------------~~KP 177 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY------FDAIVIGGEQK----------------EEKP 177 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG------CSEEEEGGGSS----------------SCTT
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhh------hheEEecCCCC----------------CCCC
Confidence 567999999999998 599999999999999999999998642 11222222211 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCC-ccCHHHHHhCCc--cEEecCCCcH---HHHhccCEEeccCCchHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDG-TNDAPALRAADI--GLSMGIQGTE---VAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg-~ND~~~l~~A~v--gIam~~~~~~---~a~~~ad~vl~~~~~~~i~~~i 712 (941)
.|+--..+.+.+.-..+.+++|||+ .||+.+-+.||+ +|.+. .+.. .....+|+++. ++..+..++
T Consensus 178 ~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~-~~~~~~~~~~~~~~~~i~--~~~el~~~l 249 (260)
T 2gfh_A 178 APSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWIN-KSGRVPLTSSPMPHYMVS--SVLELPALL 249 (260)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEEC-TTCCCCSSCCCCCSEEES--SGGGHHHHH
T ss_pred CHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEc-CCCCCcCcccCCCCEEEC--CHHHHHHHH
Confidence 3444445555555456789999995 999999999999 67776 3321 12345888876 567776655
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00023 Score=66.11 Aligned_cols=96 Identities=9% Similarity=0.033 Sum_probs=66.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+|+... ...++.+.+.. ...-
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~------f~~i~~~~~~~----------------~~Kp 75 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGV------VDKVLLSGELG----------------VEKP 75 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTS------SSEEEEHHHHS----------------CCTT
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhh------ccEEEEeccCC----------------CCCC
Confidence 3568899999999999999999999998888888888887542 11222221110 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 681 (941)
.|+--..+.+.+.-..+.++++||+.+|..+.+.|++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~ 113 (137)
T 2pr7_A 76 EEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLV 113 (137)
T ss_dssp SHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCE
Confidence 23333344444443445799999999999999999984
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00079 Score=68.58 Aligned_cols=119 Identities=16% Similarity=0.177 Sum_probs=77.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.++++.|++. +++.++|+.+.. .+.+|+... ...++.+.... ...-
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~------f~~~~~~~~~~----------------~~kp 156 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADY------FAFALCAEDLG----------------IGKP 156 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGG------CSEEEEHHHHT----------------CCTT
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHH------eeeeEEccccC----------------CCCc
Confidence 4678999999999998 999999988754 344454321 11122111110 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhCCccEEec---CCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAADIGLSMG---IQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~vgIam~---~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
.|+--..+.+.+.-..+.+++|||+. ||+.|.+.||++.++- .+..+. +..+|+++. ++..+.++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~--~l~el~~~l~ 227 (230)
T 3vay_A 157 DPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIH--NLSQLPEVLA 227 (230)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEES--SGGGHHHHHH
T ss_pred CHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeEC--CHHHHHHHHH
Confidence 33334455555554567899999998 9999999999987762 122222 567899987 7788877664
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00015 Score=75.38 Aligned_cols=53 Identities=17% Similarity=0.239 Sum_probs=43.6
Q ss_pred HHHHHHHHHH-HhCCCEEEEEcC----CccCHHHHHhCCc-cEEecCCCcHHHHhccCEE
Q 047874 646 LDKLLMVQSL-KQKGHVVAVTGD----GTNDAPALRAADI-GLSMGIQGTEVAKESSDIV 699 (941)
Q Consensus 646 ~~K~~iv~~l-~~~g~~v~~iGD----g~ND~~~l~~A~v-gIam~~~~~~~a~~~ad~v 699 (941)
.+|...++.+ .-..+.|+++|| |.||.+||+.|+. |++|+ |+.+..|+.||+|
T Consensus 187 ~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v 245 (246)
T 2amy_A 187 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLF 245 (246)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHC
T ss_pred CchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhc
Confidence 4788777777 112568999999 9999999999988 99999 9999999999986
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.92 E-value=8e-05 Score=74.74 Aligned_cols=100 Identities=14% Similarity=0.088 Sum_probs=63.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH-cCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIE-CGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
++.+++.+.++.|+++|++++++|+.+......+.+. +|+... ...++.+.... ...
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~------f~~~~~~~~~~----------------~~K 148 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA------ADHIYLSQDLG----------------MRK 148 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH------CSEEEEHHHHT----------------CCT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh------eeeEEEecccC----------------CCC
Confidence 4578999999999999999999999765443222222 222110 00111111100 011
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEec
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMG 685 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~ 685 (941)
-.|+--..+.+.+.-..+.++++||+.||..|.+.||+...+.
T Consensus 149 p~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 191 (206)
T 2b0c_A 149 PEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 191 (206)
T ss_dssp TCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEC
T ss_pred CCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEe
Confidence 2333444555655555678999999999999999999988776
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.023 Score=55.55 Aligned_cols=51 Identities=12% Similarity=0.074 Sum_probs=31.9
Q ss_pred cccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHH
Q 047874 365 GTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAM 438 (941)
Q Consensus 365 GTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~ 438 (941)
||||+|+|+|.++........ .+. .+++..+.++. ..+.||+.+|++++++
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~-------~~~--~~lL~laaa~E--------------~~SeHPlA~AIv~~a~ 51 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNR-------ISH--HKILAIVGTAE--------------SNSEHPLGTAITKYCK 51 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTT-------SCH--HHHHHHHHHGG--------------GSSSCHHHHHHHHHHH
T ss_pred CCCcCCcEEEEEEEecCCcCC-------CCH--HHHHHHHHHHH--------------ccCCCHHHHHHHHHHH
Confidence 899999999999876421000 011 12333333221 2367999999999997
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0011 Score=72.97 Aligned_cols=136 Identities=15% Similarity=0.148 Sum_probs=84.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccc--ceecchhcccCCHHHHHHhhcCceEEE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDE--AVIEGVQFRSLSAEERIAKIESIRVMA 641 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~ 641 (941)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+|+... .. .++++.+...- .+......-..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~------Fd~~~Ivs~ddv~~~-----~~~~~~~kp~~ 283 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPY------FEADFIATASDVLEA-----ENMYPQARPLG 283 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGG------SCGGGEECHHHHHHH-----HHHSTTSCCCC
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHh------cCCCEEEeccccccc-----ccccccccCCC
Confidence 5789999999999999999999999999999999999998642 11 34444332100 00000000001
Q ss_pred ecCHHHHHHHHHHHH--------------hCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCc------HH-HHhccCEE
Q 047874 642 RSSPLDKLLMVQSLK--------------QKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGT------EV-AKESSDIV 699 (941)
Q Consensus 642 ~~~p~~K~~iv~~l~--------------~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~------~~-a~~~ad~v 699 (941)
.-.|+-=....+.+. -..+.+++|||+.+|+.+-++||+. |++. .+. +. ....+|++
T Consensus 284 KP~P~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~~~~ad~v 362 (384)
T 1qyi_A 284 KPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL-TGLKGKDAAGELEAHHADYV 362 (384)
T ss_dssp TTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHTTCSEE
T ss_pred CCCHHHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC-CCccccccHHHHhhcCCCEE
Confidence 112222222222221 1246899999999999999999985 4444 221 12 23468999
Q ss_pred eccCCchHHHHHHH
Q 047874 700 IMDDNFSSVVTVLR 713 (941)
Q Consensus 700 l~~~~~~~i~~~i~ 713 (941)
+. ++..+..+++
T Consensus 363 i~--sl~eL~~~l~ 374 (384)
T 1qyi_A 363 IN--HLGELRGVLD 374 (384)
T ss_dssp ES--SGGGHHHHHS
T ss_pred EC--CHHHHHHHHH
Confidence 87 6777776653
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.004 Score=62.00 Aligned_cols=120 Identities=12% Similarity=0.111 Sum_probs=74.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.++++.|+++|+++.++||.....+..+.. ... ..++.+.... ..+-
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~~--------d~v~~~~~~~----------------~~KP 88 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PVN--------DWMIAAPRPT----------------AGWP 88 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TTT--------TTCEECCCCS----------------SCTT
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---ccC--------CEEEECCcCC----------------CCCC
Confidence 567999999999999999999999999887755443 110 1122221110 0111
Q ss_pred CHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHHHhCCc-cEEecCCCcH---------------------------HHHh
Q 047874 644 SPLDKLLMVQSLKQK-GHVVAVTGDGTNDAPALRAADI-GLSMGIQGTE---------------------------VAKE 694 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~v-gIam~~~~~~---------------------------~a~~ 694 (941)
.|+--....+.+.-. .+.++||||+.+|+.+-++|++ +|++. .+.. ....
T Consensus 89 ~p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~-~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~ 167 (196)
T 2oda_A 89 QPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA-SCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSL 167 (196)
T ss_dssp STHHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES-SSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc-cCCccccccHHHhhhcchhhhhhhHHHHHHHHHHc
Confidence 233223333333322 2579999999999999999997 45554 2211 1123
Q ss_pred ccCEEeccCCchHHHHHHH
Q 047874 695 SSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 695 ~ad~vl~~~~~~~i~~~i~ 713 (941)
.+|+++. ++..+..++.
T Consensus 168 ~~d~vi~--~~~eL~~~l~ 184 (196)
T 2oda_A 168 GVHSVID--HLGELESCLA 184 (196)
T ss_dssp TCSEEES--SGGGHHHHHH
T ss_pred CCCEEeC--CHHHHHHHHH
Confidence 5899886 6777776664
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.00068 Score=69.96 Aligned_cols=84 Identities=13% Similarity=0.127 Sum_probs=64.8
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCH----HHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCce
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNV----HTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIR 638 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 638 (941)
.++.|++.+.++.|+++|+++.++||++. ..+..-.+++|+..... -.
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~----------------------------~~ 151 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND----------------------------KT 151 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST----------------------------TT
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc----------------------------ce
Confidence 45679999999999999999999999975 47778888899975210 01
Q ss_pred EEEecCHHHHHHHHHHHHhC-CCEEEEEcCCccCHHH
Q 047874 639 VMARSSPLDKLLMVQSLKQK-GHVVAVTGDGTNDAPA 674 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~ 674 (941)
++.+.....|....+.+.+. -..|+++||..+|.++
T Consensus 152 Lilr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 152 LLLKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp EEEESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred eEecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 44444446788888888874 4467889999999886
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.82 E-value=0.00066 Score=69.42 Aligned_cols=104 Identities=10% Similarity=-0.021 Sum_probs=71.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH------cCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCc
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIE------CGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESI 637 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~------~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 637 (941)
++.|++.++++.|++. +++.++|+.+...+..+.+. .|+... ...++.+.+..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~------fd~i~~~~~~~-------------- 170 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY------FEKTYLSYEMK-------------- 170 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH------CSEEEEHHHHT--------------
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh------CCEEEeecccC--------------
Confidence 3568999999999999 99999999999888876643 343210 01111111110
Q ss_pred eEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHH
Q 047874 638 RVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEV 691 (941)
Q Consensus 638 ~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~ 691 (941)
...-.|+--..+.+.+.-..+.|++|||+.||+.|.+.||++.++. ++.+.
T Consensus 171 --~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v-~~~~~ 221 (229)
T 4dcc_A 171 --MAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTP-KAGED 221 (229)
T ss_dssp --CCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECC-CTTCC
T ss_pred --CCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEE-CCHHH
Confidence 1122344445566666555678999999999999999999998887 44443
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0058 Score=63.72 Aligned_cols=41 Identities=15% Similarity=0.101 Sum_probs=36.8
Q ss_pred CCcchHHHHHHHHhcCCeEEEEc---CCCHHHHHHHHHHcCCCC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVT---GDNVHTARAIAIECGILN 605 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~T---Gd~~~~a~~ia~~~gi~~ 605 (941)
+.+++.++++.+++.|+++.++| |++........+++|+..
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 55788999999999999999999 999999988888888854
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0022 Score=66.65 Aligned_cols=112 Identities=12% Similarity=0.228 Sum_probs=78.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.+.++.|++.|+++.+.|+... +..+.+.+|+... .+.++.+.+... ..-
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~~gl~~~------Fd~i~~~~~~~~----------------~KP 171 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNHLGISDK------FDFIADAGKCKN----------------NKP 171 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHHTCGGG------CSEECCGGGCCS----------------CTT
T ss_pred ccchhHHHHHHHHHhcccccccccccch--hhhHhhhcccccc------cceeecccccCC----------------CCC
Confidence 4678999999999999999998887643 5667888898642 223333333211 122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEecCCCcHHHHhccCEEecc
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMGIQGTEVAKESSDIVIMD 702 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~~~~~~~a~~~ad~vl~~ 702 (941)
.|+-=..+++.+.-..+.+++|||+.+|+.+-++||+ .|+++ +..+ ...||+++.+
T Consensus 172 ~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~~~--~~~ad~vi~~ 228 (250)
T 4gib_A 172 HPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVG-NYEN--LKKANLVVDS 228 (250)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEES-CTTT--TTTSSEEESS
T ss_pred cHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEEC-ChhH--hccCCEEECC
Confidence 4455556666666566789999999999999999998 57776 3332 2458999873
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0014 Score=68.64 Aligned_cols=42 Identities=14% Similarity=0.233 Sum_probs=37.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEc---CCCHHHHHHHHHHcCCCCC
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVT---GDNVHTARAIAIECGILNP 606 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~T---Gd~~~~a~~ia~~~gi~~~ 606 (941)
.+ ++++++|++++++|++++++| |+.........+++|+...
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 45 899999999999999999999 8888888889999998653
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0042 Score=65.20 Aligned_cols=43 Identities=14% Similarity=0.091 Sum_probs=38.5
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEc---CCCHHHHHHHHHHcCCCC
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVT---GDNVHTARAIAIECGILN 605 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~T---Gd~~~~a~~ia~~~gi~~ 605 (941)
+++.+++.+++++++++|++++++| |+.........+++|+..
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 5567899999999999999999999 999999888889998864
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.60 E-value=0.00095 Score=68.97 Aligned_cols=84 Identities=14% Similarity=0.118 Sum_probs=63.8
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCH----HHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCce
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNV----HTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIR 638 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 638 (941)
.++.|++.+.++.|+++|+++.++||++. ..+..-.+++|+..-.. . .
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~----~------------------------~ 151 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE----S------------------------A 151 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG----G------------------------G
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc----c------------------------c
Confidence 45678999999999999999999999965 47777888899975210 0 1
Q ss_pred EEEecCHHHHHHHHHHHHhCC-CEEEEEcCCccCHHH
Q 047874 639 VMARSSPLDKLLMVQSLKQKG-HVVAVTGDGTNDAPA 674 (941)
Q Consensus 639 v~~~~~p~~K~~iv~~l~~~g-~~v~~iGDg~ND~~~ 674 (941)
++.|.....|....+.+.+.| ..|+++||..+|.++
T Consensus 152 Lilr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 152 FYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp EEEESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred eeccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 444434456777777787774 467889999999875
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.92 E-value=0.0072 Score=61.97 Aligned_cols=43 Identities=14% Similarity=0.098 Sum_probs=32.3
Q ss_pred CCCEEEEEcCC-ccCHHHHHhCCccEE---ecCCCc-HHHH---hccCEEec
Q 047874 658 KGHVVAVTGDG-TNDAPALRAADIGLS---MGIQGT-EVAK---ESSDIVIM 701 (941)
Q Consensus 658 ~g~~v~~iGDg-~ND~~~l~~A~vgIa---m~~~~~-~~a~---~~ad~vl~ 701 (941)
..+.|+++||+ .||.+|++.||++++ +| ++. +..+ ..+|+++.
T Consensus 192 ~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 192 HSEETVIVGDNLRTDILAGFQAGLETILVLSG-VSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp CGGGEEEEESCTTTHHHHHHHTTCEEEEESSS-SCCGGGGSSCSSCCSEEES
T ss_pred CcceEEEECCCchhHHHHHHHcCCeEEEECCC-CCChhhhhhcCCCCCEEEC
Confidence 35689999999 799999999999854 44 333 3333 46899886
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.002 Score=62.94 Aligned_cols=99 Identities=18% Similarity=0.150 Sum_probs=63.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCCCcccceecc----hhccc
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGD---------------NVHTARAIAIECGILNPDVDLNKDEAVIEG----VQFRS 624 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g----~~~~~ 624 (941)
++.|++.++++.|+++|+++.++|+. ....+..+.+.+|+.. +..+.++ .+...
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f-------d~v~~s~~~~~~~~~~ 114 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF-------DEVLICPHLPADECDC 114 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE-------EEEEEECCCGGGCCSS
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe-------eEEEEcCCCCcccccc
Confidence 57799999999999999999999998 4667788888888851 1111111 11000
Q ss_pred CCHHHHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEec
Q 047874 625 LSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMG 685 (941)
Q Consensus 625 ~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~ 685 (941)
..-.|+-=..+.+.+.-..+.+++|||+.+|+.+-+.|++. |.+.
T Consensus 115 ----------------~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~ 160 (176)
T 2fpr_A 115 ----------------RKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYD 160 (176)
T ss_dssp ----------------STTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred ----------------cCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEc
Confidence 00011111112223333346799999999999999999985 5554
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=95.85 E-value=0.012 Score=62.84 Aligned_cols=96 Identities=16% Similarity=0.033 Sum_probs=67.0
Q ss_pred ccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHH---HHHHHH--------cCCCCCCCCCCcccceecchhcccCCHHH
Q 047874 561 LKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTA---RAIAIE--------CGILNPDVDLNKDEAVIEGVQFRSLSAEE 629 (941)
Q Consensus 561 ~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a---~~ia~~--------~gi~~~~~~~~~~~~~~~g~~~~~~~~~~ 629 (941)
.++++.+++.++++.|+++|+++.++||+....+ ...-+. .|+.. ..++.+....
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~~~~------ 250 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL--------VMQCQREQGD------ 250 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC--------SEEEECCTTC------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCc--------hheeeccCCC------
Confidence 4577899999999999999999999999985432 344444 67731 1111111100
Q ss_pred HHHhhcCceEEEecCHHHHHHHHHHHHhCCC-EEEEEcCCccCHHHHHhCCcc
Q 047874 630 RIAKIESIRVMARSSPLDKLLMVQSLKQKGH-VVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 630 ~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~-~v~~iGDg~ND~~~l~~A~vg 681 (941)
.+-.|+-|..+.+.+....+ .++|+||..+|+.|-++||+-
T Consensus 251 -----------~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 251 -----------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp -----------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred -----------CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCe
Confidence 12246677777777754443 468999999999999999985
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.011 Score=60.39 Aligned_cols=114 Identities=15% Similarity=0.189 Sum_probs=73.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.++++.|+++| ++.++|+.+...+..+.+.+|+... +... +....
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~---------------------------f~~~-~~~~~ 146 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDE---------------------------VEGR-VLIYI 146 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHH---------------------------TTTC-EEEES
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHh---------------------------cCee-EEecC
Confidence 57899999999999999 9999999999999999999887521 0000 11111
Q ss_pred CHHHHHHHHHHHH--hCCCEEEEEcCCcc---CHHHHHhCCcc-EEecCCC----c-HHHHhc--cCEEeccCCchHHHH
Q 047874 644 SPLDKLLMVQSLK--QKGHVVAVTGDGTN---DAPALRAADIG-LSMGIQG----T-EVAKES--SDIVIMDDNFSSVVT 710 (941)
Q Consensus 644 ~p~~K~~iv~~l~--~~g~~v~~iGDg~N---D~~~l~~A~vg-Iam~~~~----~-~~a~~~--ad~vl~~~~~~~i~~ 710 (941)
.|..+++.+. -..+.+++|||+.+ |..+-+.||+. |.+. .+ . +..++. +|+++. ++..+..
T Consensus 147 ---~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~-~g~~~~~~~~l~~~~~~~~~i~--~~~el~~ 220 (231)
T 2p11_A 147 ---HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPR-QGHYAFDPKEISSHPPADVTVE--RIGDLVE 220 (231)
T ss_dssp ---SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEEC-CSSSSSCHHHHHHSCCCSEEES--SGGGGGG
T ss_pred ---ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeC-CCCCCCcchhccccCCCceeec--CHHHHHH
Confidence 1222333222 24568999999999 55556677763 4443 22 2 233333 898886 5555544
Q ss_pred HH
Q 047874 711 VL 712 (941)
Q Consensus 711 ~i 712 (941)
++
T Consensus 221 ~l 222 (231)
T 2p11_A 221 MD 222 (231)
T ss_dssp CG
T ss_pred HH
Confidence 33
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.82 E-value=0.0088 Score=64.37 Aligned_cols=119 Identities=17% Similarity=0.174 Sum_probs=74.2
Q ss_pred ccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc----CCCCCCCCCCcccceecchhcc--------cCCH-
Q 047874 561 LKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIEC----GILNPDVDLNKDEAVIEGVQFR--------SLSA- 627 (941)
Q Consensus 561 ~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~----gi~~~~~~~~~~~~~~~g~~~~--------~~~~- 627 (941)
....+.+++++.++.|+++|++|+++||-...-++.+|..+ ||+.++ |+ |..+. ....
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~--------Vi-G~~~~~~~~~~~~~~~~~ 210 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPEN--------VI-GVTTLLKNRKTGELTTAR 210 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGG--------EE-EECEEEECTTTCCEECHH
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHH--------eE-eeeeeeeccccccccccc
Confidence 34457899999999999999999999999999999999985 565432 11 11100 0000
Q ss_pred HHHHH------hhcCceEEEe-----cCHHHHHHHHHHHHhC-CCEEEEEcCC-ccCHHHHHh--CCccEEecCCC
Q 047874 628 EERIA------KIESIRVMAR-----SSPLDKLLMVQSLKQK-GHVVAVTGDG-TNDAPALRA--ADIGLSMGIQG 688 (941)
Q Consensus 628 ~~~~~------~~~~~~v~~~-----~~p~~K~~iv~~l~~~-g~~v~~iGDg-~ND~~~l~~--A~vgIam~~~~ 688 (941)
.+..+ ......+-.+ +.-+.|...++...+. ...+++.||+ ..|.+||+. ++.|+++-.|-
T Consensus 211 ~~~~dg~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~in~ 286 (327)
T 4as2_A 211 KQIAEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLWVNR 286 (327)
T ss_dssp HHHHTTCCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEEECC
T ss_pred cccccccccccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEEEec
Confidence 00000 0011111111 2246788877776544 3468999999 579999976 55566554333
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.62 E-value=0.0058 Score=61.87 Aligned_cols=93 Identities=9% Similarity=0.073 Sum_probs=59.8
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.|++.+.++.|+++|+++.++|+... .+..+.+.+|+... .+.++.+.+.. ...-.
T Consensus 96 ~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~------f~~~~~~~~~~----------------~~Kp~ 152 (220)
T 2zg6_A 96 LYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKY------FDALALSYEIK----------------AVKPN 152 (220)
T ss_dssp ECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGG------CSEEC---------------------------
T ss_pred ECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhH------eeEEEeccccC----------------CCCCC
Confidence 568999999999999999999999866 47888888998531 11222221110 11112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCcc-CHHHHHhCCccEE
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTN-DAPALRAADIGLS 683 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~N-D~~~l~~A~vgIa 683 (941)
|+--..+.+.+.-. . ++|||+.+ |..+-+.||+...
T Consensus 153 ~~~~~~~~~~~~~~--~-~~vgD~~~~Di~~a~~aG~~~i 189 (220)
T 2zg6_A 153 PKIFGFALAKVGYP--A-VHVGDIYELDYIGAKRSYVDPI 189 (220)
T ss_dssp CCHHHHHHHHHCSS--E-EEEESSCCCCCCCSSSCSEEEE
T ss_pred HHHHHHHHHHcCCC--e-EEEcCCchHhHHHHHHCCCeEE
Confidence 22223333333222 2 99999999 9999999999754
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=95.55 E-value=0.0061 Score=63.46 Aligned_cols=41 Identities=12% Similarity=0.195 Sum_probs=34.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCC---HHHHHHHHHHcCCC
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDN---VHTARAIAIECGIL 604 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~---~~~a~~ia~~~gi~ 604 (941)
++.|++.++|+.|+++|+++.++||+. ...+....+.+|+.
T Consensus 101 ~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 101 EALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 456899999999999999999999998 44555566778886
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.15 E-value=0.029 Score=57.66 Aligned_cols=110 Identities=15% Similarity=0.209 Sum_probs=75.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.+.++.|+++|+++.++|+... +..+-+.+|+... ...++.+.+... .+-
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~------fd~i~~~~~~~~----------------~KP 150 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREF------FTFCADASQLKN----------------SKP 150 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGG------CSEECCGGGCSS----------------CTT
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccc------cccccccccccC----------------CCC
Confidence 3578999999999999999999998754 4566788888642 223333333211 122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEecCCCcHHHHhccCEEecc
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMGIQGTEVAKESSDIVIMD 702 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~~~~~~~a~~~ad~vl~~ 702 (941)
.|+-=....+.+.-..+.|++|||+.+|+.+-++||+ .|+++ .+. ..+|.++.+
T Consensus 151 ~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~-~g~----~~ad~~~~~ 205 (243)
T 4g9b_A 151 DPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIG-AGL----TGAQLLLPS 205 (243)
T ss_dssp STHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEES-TTC----CSCSEEESS
T ss_pred cHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEEC-CCC----CcHHHhcCC
Confidence 3444445556666567789999999999999999998 46665 332 236666553
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=95.01 E-value=0.039 Score=57.46 Aligned_cols=114 Identities=17% Similarity=0.147 Sum_probs=75.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc---CCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEE
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIEC---GILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~---gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 640 (941)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+ |+... .+.++.+ +. .
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~------fd~i~~~-~~-----------------~ 185 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL------VDGHFDT-KI-----------------G 185 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG------CSEEECG-GG-----------------C
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhh------ccEEEec-CC-----------------C
Confidence 57899999999999999999999999988877777644 35421 1112222 11 0
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCc---HHHHhccCEEec
Q 047874 641 ARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGT---EVAKESSDIVIM 701 (941)
Q Consensus 641 ~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~---~~a~~~ad~vl~ 701 (941)
..-.|+-=..+.+.+.-..+.+++|||..+|+.+-++||+- |.+...+. +.....+|+++.
T Consensus 186 ~KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~ 250 (261)
T 1yns_A 186 HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 250 (261)
T ss_dssp CTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred CCCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEEC
Confidence 12233433455566655567899999999999999999984 44531121 122244677765
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=94.97 E-value=0.14 Score=52.80 Aligned_cols=44 Identities=20% Similarity=0.234 Sum_probs=33.4
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEc---CCCHHHHHHHHHHcCCCC
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVT---GDNVHTARAIAIECGILN 605 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~T---Gd~~~~a~~ia~~~gi~~ 605 (941)
.++.-+++.++++.++++|++++++| |+.........+++|+..
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 44555788999999999999999999 666666666667778754
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=93.31 E-value=0.014 Score=58.87 Aligned_cols=90 Identities=19% Similarity=0.181 Sum_probs=55.4
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHH----cCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEE
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIE----CGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 640 (941)
+.+++.+.++.|+++|+++.++|+.+...+..+.+. ++... .+... ..+
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~------------~~~~~---------------~~~ 141 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA------------TNMNP---------------VIF 141 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT------------TTBCC---------------CEE
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc------------cccch---------------hhh
Confidence 357899999999999999999999975433333222 33210 00000 001
Q ss_pred Eec--CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEec
Q 047874 641 ARS--SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMG 685 (941)
Q Consensus 641 ~~~--~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~ 685 (941)
... .|+-. .+.+++.|- ++++||..+|+.+-+.||+- |.+.
T Consensus 142 ~~~KP~p~~~---~~~~~~~g~-~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 142 AGDKPGQNTK---SQWLQDKNI-RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp CCCCTTCCCS---HHHHHHTTE-EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred cCCCCCHHHH---HHHHHHCCC-EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 111 22222 233444454 99999999999999999985 4443
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=93.14 E-value=1.2 Score=42.35 Aligned_cols=30 Identities=20% Similarity=0.297 Sum_probs=21.9
Q ss_pred HHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccC
Q 047874 517 KIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKD 563 (941)
Q Consensus 517 ~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d 563 (941)
.....+..+|..++.+|. |-.++|++++.|
T Consensus 136 ~~~~~~~~~G~T~v~va~-----------------dg~~~g~i~l~D 165 (165)
T 2arf_A 136 DAMTDHEMKGQTAILVAI-----------------DGVLCGMIAIAD 165 (165)
T ss_dssp HHHHHHHTTTSEEEEEEE-----------------TTEEEEEEEECC
T ss_pred HHHHHHHhCCCeEEEEEE-----------------CCEEEEEEEEEC
Confidence 344566778877777775 447899999987
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=91.83 E-value=0.18 Score=46.74 Aligned_cols=41 Identities=7% Similarity=-0.055 Sum_probs=35.4
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCC---HHHHHHHHHHcCCCC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDN---VHTARAIAIECGILN 605 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~---~~~a~~ia~~~gi~~ 605 (941)
+.+++.++|++++++|++++++|||+ ...+...+++.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 35789999999999999999999998 566777788888864
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=91.44 E-value=0.084 Score=56.32 Aligned_cols=57 Identities=14% Similarity=0.112 Sum_probs=37.5
Q ss_pred CCEEEEEcCCc-cCHHHHHhCCccEEecCCC---cHHHH---------hccCEEeccCCchHHHHHHHH-HHH
Q 047874 659 GHVVAVTGDGT-NDAPALRAADIGLSMGIQG---TEVAK---------ESSDIVIMDDNFSSVVTVLRW-GRC 717 (941)
Q Consensus 659 g~~v~~iGDg~-ND~~~l~~A~vgIam~~~~---~~~a~---------~~ad~vl~~~~~~~i~~~i~~-gR~ 717 (941)
.+.|+||||+. ||..|.+.||+...+-..+ .+... ..+|+++. ++..+..++++ |+.
T Consensus 232 ~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~--~l~el~~~l~~~~~~ 302 (306)
T 2oyc_A 232 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVE--SIADLTEGLEDEGHH 302 (306)
T ss_dssp GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEES--SGGGGGGGC------
T ss_pred hHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEEC--CHHHHHHHHHhhccc
Confidence 46899999996 9999999999976652122 22222 35899886 67777766643 443
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=91.31 E-value=0.33 Score=55.91 Aligned_cols=98 Identities=13% Similarity=0.086 Sum_probs=63.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCC------CHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCc
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGD------NVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESI 637 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 637 (941)
++.+++.++++.|+++|+++.++|+. .......... |+... .+.++.+.+...
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l~~~------fd~i~~~~~~~~------------- 158 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--ELKMH------FDFLIESCQVGM------------- 158 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HHHTT------SSEEEEHHHHTC-------------
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hhhhh------eeEEEeccccCC-------------
Confidence 46799999999999999999999996 2222222211 33211 122333332211
Q ss_pred eEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEec
Q 047874 638 RVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMG 685 (941)
Q Consensus 638 ~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~ 685 (941)
..-.|+-=..+.+.+.-..+.+++|||+.||+.+.+.||+....-
T Consensus 159 ---~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 159 ---VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp ---CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred ---CCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 122344445555666555678999999999999999999976554
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=90.33 E-value=0.2 Score=55.94 Aligned_cols=40 Identities=13% Similarity=0.194 Sum_probs=33.9
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCC------------HHHHHHHHHHcCCC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDN------------VHTARAIAIECGIL 604 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~------------~~~a~~ia~~~gi~ 604 (941)
+-+++.++++.|+++|+++.++|+.+ ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999965 22367788888884
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=89.22 E-value=0.34 Score=50.08 Aligned_cols=116 Identities=12% Similarity=0.067 Sum_probs=62.4
Q ss_pred ccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHH--HHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCce
Q 047874 561 LKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHT--ARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIR 638 (941)
Q Consensus 561 ~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 638 (941)
-...+.+++.++++.|+ +|+++ ++|+.+... ... .......+ ...+......-.
T Consensus 123 ~~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~------------------~~~~~~~l----~~~f~~~~~~~~ 178 (264)
T 1yv9_A 123 DTELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERG------------------LLPGAGSV----VTFVETATQTKP 178 (264)
T ss_dssp CTTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTE------------------EEECHHHH----HHHHHHHHTCCC
T ss_pred CCCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCC------------------cccCCcHH----HHHHHHHhCCCc
Confidence 34557789999999997 89997 777765311 000 00000000 001111111101
Q ss_pred E-EEecCHHHHHHHHHHHHhCCCEEEEEcCC-ccCHHHHHhCCcc---EEecCCCc-HHHHh---ccCEEec
Q 047874 639 V-MARSSPLDKLLMVQSLKQKGHVVAVTGDG-TNDAPALRAADIG---LSMGIQGT-EVAKE---SSDIVIM 701 (941)
Q Consensus 639 v-~~~~~p~~K~~iv~~l~~~g~~v~~iGDg-~ND~~~l~~A~vg---Iam~~~~~-~~a~~---~ad~vl~ 701 (941)
+ ...-.|+-=..+.+.+.-..+.+++|||+ .||+.+.++||+. |..| .+. +..++ .+|+++.
T Consensus 179 ~~~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g-~~~~~~l~~~~~~~d~v~~ 249 (264)
T 1yv9_A 179 VYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSG-FTPKSAVPTLPTPPTYVVD 249 (264)
T ss_dssp EECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTS-SSCSSSTTTCSSCCSEEES
T ss_pred cccCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCC-CCCHHHHHhcCCCCCEEEe
Confidence 1 11223333344445554445689999999 6999999999986 3334 222 22232 5888875
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=87.55 E-value=0.54 Score=48.43 Aligned_cols=95 Identities=8% Similarity=0.050 Sum_probs=62.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc--C---------CCCCCCCCCcccceecchhcccCCHHHHHH
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIEC--G---------ILNPDVDLNKDEAVIEGVQFRSLSAEERIA 632 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~--g---------i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 632 (941)
++.|++.++++. |+++.++|+.+...+..+.+.+ | +... . ....+. ..
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~---~---~~~f~~---------~~-- 183 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSY---I---DGYFDI---------NT-- 183 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGG---C---CEEECH---------HH--
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhh---c---ceEEee---------ec--
Confidence 567888888887 9999999999999888887766 4 2110 0 000000 00
Q ss_pred hhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEec
Q 047874 633 KIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMG 685 (941)
Q Consensus 633 ~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~ 685 (941)
. ...-.|+-=..+.+.+.-..+.+++|||+.+|+.+-++||+- |.+.
T Consensus 184 --~----g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~ 231 (253)
T 2g80_A 184 --S----GKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLAS 231 (253)
T ss_dssp --H----CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEEC
T ss_pred --c----CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEc
Confidence 0 012234444555566655567899999999999999999985 4443
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=85.03 E-value=2 Score=41.24 Aligned_cols=101 Identities=11% Similarity=0.089 Sum_probs=60.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCC---CHHH---HHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCc
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGD---NVHT---ARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESI 637 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd---~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 637 (941)
++.||+.++++.|++. +++.++|+. .... ...+.+.+|.... ...+++|..
T Consensus 69 ~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~------~~~i~~~~~---------------- 125 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDP------QHFVFCGRK---------------- 125 (180)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCG------GGEEECSCG----------------
T ss_pred CCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCc------ccEEEeCCc----------------
Confidence 5789999999999984 999999998 3111 2223343454321 122222221
Q ss_pred eEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHH
Q 047874 638 RVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 638 ~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
.| + +.+++|||+.+|+. ++|+-.|++. .+... ...+++++. ++..+..++
T Consensus 126 ---------~~------l----~~~l~ieDs~~~i~--~aaG~~i~~~-~~~~~-~~~~~~~i~--~~~el~~~l 175 (180)
T 3bwv_A 126 ---------NI------I----LADYLIDDNPKQLE--IFEGKSIMFT-ASHNV-YEHRFERVS--GWRDVKNYF 175 (180)
T ss_dssp ---------GG------B----CCSEEEESCHHHHH--HCSSEEEEEC-CGGGT-TCCSSEEEC--SHHHHHHHH
T ss_pred ---------Ce------e----cccEEecCCcchHH--HhCCCeEEeC-CCccc-CCCCceecC--CHHHHHHHH
Confidence 11 1 45799999999985 5677556664 22221 134666664 566666554
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=81.13 E-value=0.61 Score=45.29 Aligned_cols=90 Identities=11% Similarity=-0.014 Sum_probs=62.2
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
.+||++.+.++.+++. +++++.|.-....|..+.+.++.... ...++.+.....
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~------f~~~~~rd~~~~------------------- 108 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGA------FRARLFRESCVF------------------- 108 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCC------EEEEECGGGSEE-------------------
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCc------EEEEEeccCcee-------------------
Confidence 4799999999999998 99999999999999999999988641 111222221110
Q ss_pred CHHHHHHHHHHHHh---CCCEEEEEcCCccCHHHHHhCCccE
Q 047874 644 SPLDKLLMVQSLKQ---KGHVVAVTGDGTNDAPALRAADIGL 682 (941)
Q Consensus 644 ~p~~K~~iv~~l~~---~g~~v~~iGDg~ND~~~l~~A~vgI 682 (941)
.|...++.+.. .-+.|+++||..+|..+=..+++-|
T Consensus 109 ---~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 109 ---HRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp ---ETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred ---cCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 11112222222 3457999999999988766666654
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.89 E-value=0.52 Score=46.39 Aligned_cols=90 Identities=11% Similarity=-0.019 Sum_probs=62.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
.+||++.+.++.|++. +++++.|.-....|..+.+.+++... ...++.+.....
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~------f~~~l~rd~~~~------------------- 121 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGV------FRARLFRESCVF------------------- 121 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSC------EEEEECGGGCEE-------------------
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCccc------EEEEEEccccee-------------------
Confidence 4689999999999998 99999999999999999999998641 112222222111
Q ss_pred CHHHHHHHHHHHHh---CCCEEEEEcCCccCHHHHHhCCccE
Q 047874 644 SPLDKLLMVQSLKQ---KGHVVAVTGDGTNDAPALRAADIGL 682 (941)
Q Consensus 644 ~p~~K~~iv~~l~~---~g~~v~~iGDg~ND~~~l~~A~vgI 682 (941)
.|...++.++. .-..|++++|..++..+=..|++-|
T Consensus 122 ---~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i 160 (195)
T 2hhl_A 122 ---HRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPV 160 (195)
T ss_dssp ---ETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEEC
T ss_pred ---cCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEE
Confidence 11112222322 3457999999999988766665554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 941 | ||||
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 3e-39 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 3e-19 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 1e-13 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 1e-38 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 7e-35 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 8e-29 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 1e-22 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 9e-19 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 3e-16 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 6e-13 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 2e-07 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 2e-06 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 2e-05 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-04 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 3e-04 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 5e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 5e-04 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 0.001 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.003 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 0.003 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 0.003 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 150 bits (379), Expect = 3e-39
Identities = 61/280 (21%), Positives = 111/280 (39%), Gaps = 39/280 (13%)
Query: 673 PALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTV 732
P A I + + +AK+++ + S+ +V GR +YNN+++F+++ ++
Sbjct: 193 PEGLPAVITTCLALGTRRMAKKNAIV-------RSLPSVETLGRAIYNNMKQFIRYLISS 245
Query: 733 NVAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKP 792
NV +V F A L VQLLWVNL+ D L A AL P D+M +PP +P
Sbjct: 246 NVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEP 305
Query: 793 LITKIMWRNLISQAIYQVAILLTL------------------------------QFKGRS 822
LI+ ++ ++ Y A + F+G
Sbjct: 306 LISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLD 365
Query: 823 ILGVKESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIALQL-- 880
+ TM + V ++ N N+ + + N L I ++++L
Sbjct: 366 CEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLI 425
Query: 881 VMVEFLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCI 920
+ V+ L + L+ QW + I+ + ++K I
Sbjct: 426 LYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFI 465
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 89.7 bits (222), Expect = 3e-19
Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 18/171 (10%)
Query: 210 VTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLTSWIGKIGLTVAVLVLA 269
A G + + + + E ++TPLQ +L++ + K+ + V V
Sbjct: 100 ANAIVGVWQERNAENAIEALKEYEPAATE-QDKTPLQQKLDEFGEQLSKVISLICVAVWL 158
Query: 270 VMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLT 329
+ + + + I AV + V AIPEGLP +T
Sbjct: 159 INIGHFNDPVHGGSWIR---------------GAIYYFKIAVALAVAAIPEGLPAVITTC 203
Query: 330 LAFSMKRMMKDHAMVRKLSACETMGSATTICTDK--TGTLTLNQMKVTEFW 378
LA +RM K +A+VR L + ET+G A + ++ N +V +
Sbjct: 204 LALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVCIF 254
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 72.0 bits (176), Expect = 1e-13
Identities = 21/160 (13%), Positives = 44/160 (27%), Gaps = 17/160 (10%)
Query: 19 GVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIIL 78
+ + G+ + + +G N K V E F+D + IL
Sbjct: 8 STEECLAYFGVSETTGLTPDQVK--RHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRIL 65
Query: 79 LVCALLSLGFGIKQVG--LKEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSD 136
L+ A +S + G + + I+ + V A E+
Sbjct: 66 LLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAEN-----AIEALK 120
Query: 137 IRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADGLFL 176
+ + L + + G+Q+ +
Sbjct: 121 EYEPAATEQDKTPL--------QQKLDEFGEQLSKVISLI 152
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 139 bits (350), Expect = 1e-38
Identities = 61/162 (37%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Query: 554 TLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKD 613
T DP R V +++ CR+AG+ V M+TGDN TA AI GI + ++
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV--A 67
Query: 614 EAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAP 673
+ G +F L E+ AR P K +V+ L+ + A+TGDG NDAP
Sbjct: 68 DRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAP 127
Query: 674 ALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWG 715
AL+ A+IG++MG GT VAK +S++V+ DDNFS++V + G
Sbjct: 128 ALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 135 bits (340), Expect = 7e-35
Identities = 39/381 (10%), Positives = 101/381 (26%), Gaps = 46/381 (12%)
Query: 344 VRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQE 403
L +G + I + + ++ F K K + L + +++L
Sbjct: 27 YELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLN---SNWDMLFI 83
Query: 404 AVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSE 463
++ + + +A + + + +
Sbjct: 84 VFSIHLIDIL---------KKLSHDEIEAFMYQDEP-VELKLQNISTNLADCFNLNEQLP 133
Query: 464 KKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMA 523
+ + K ++ + A + V ++ + +A
Sbjct: 134 LQFLDNV-KVGKNNIYAALEEFATTELHVSD---------------ATLFSLKGALWTLA 177
Query: 524 AKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAVESCRNAGVNV 583
+ + + + ++ +TG ++ V+ + + AG +
Sbjct: 178 QEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRP---VDEVKVLLNDLKGAGFEL 234
Query: 584 KMVTGDNVHTARAIAIECGILN---PDVDLNKDEAVIEGVQFRSLSAEERIAK--IESIR 638
+ TG G+L D + + + + +
Sbjct: 235 GIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAAL 294
Query: 639 VMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAAD---IGLSMGIQGTEVAKE- 694
+ + Q V + GD D + + IG G++G + A E
Sbjct: 295 YGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGEL 354
Query: 695 ---SSDIVIMDDNFSSVVTVL 712
+D VI ++ + VL
Sbjct: 355 EAHHADYVI--NHLGELRGVL 373
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 113 bits (282), Expect = 8e-29
Identities = 41/213 (19%), Positives = 68/213 (31%), Gaps = 19/213 (8%)
Query: 372 MKVTEFWLGKEAMKSD-------ACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTS-- 422
M V W + ++D A + + L + A N ++S S
Sbjct: 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKR 61
Query: 423 EITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKR-INEKVFHT 481
+ G +E A+L +V + + + +FNS K + +R N +
Sbjct: 62 DTAGDASESALLKCIE-LSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVL 120
Query: 482 HWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEAD 541
KGA E IL CS G LD E + + E+ R + F
Sbjct: 121 VMKGAPERILDRCSSIL-VQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGK 179
Query: 542 GQVQEKLE-------ETGLTLLGLVGLKDPCRP 567
K + L +GL+ + D
Sbjct: 180 FPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHH 212
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 92.5 bits (229), Expect = 1e-22
Identities = 48/161 (29%), Positives = 70/161 (43%), Gaps = 35/161 (21%)
Query: 553 LTLLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNK 612
T G D + + AV+ + G+ V M+TGDN +A A
Sbjct: 10 KTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEA---------------- 53
Query: 613 DEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDA 672
++ V+A P K V+ L Q VVA GDG NDA
Sbjct: 54 -----------------ISRELNLDLVIAEVLPHQKSEEVKKL-QAKEVVAFVGDGINDA 95
Query: 673 PALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713
PAL AD+G+++G G++VA ES DIV++ D+ VV ++
Sbjct: 96 PALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 84.6 bits (208), Expect = 9e-19
Identities = 41/233 (17%), Positives = 74/233 (31%), Gaps = 42/233 (18%)
Query: 364 TGTLTLNQMKVT--------EFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYN 415
+LN+ +T E + ++S L EL L ++
Sbjct: 14 GDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQ-----FDGLVELATICA-LCNDSSLDF 67
Query: 416 SNSLSTSEITGSPTEKAILSWA---------------MIDLGMNVDEPKQYCTVINVEAF 460
+ + E G TE A+ + + +Q F
Sbjct: 68 NETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEF 127
Query: 461 NSEKKRSGVLMKRINEKVFHTHW----KGAAEMILVMCSHYYVKSGTIRILDGEERTQIE 516
+ ++K V KGA E ++ C++ V T + G + +I
Sbjct: 128 SRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKIL 186
Query: 517 KIIQE--MAAKSLRCIAFAHTKAAEADGQVQEKLE------ETGLTLLGLVGL 561
+I+E +LRC+A A ++ ET LT +G+VG+
Sbjct: 187 SVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 76.6 bits (187), Expect = 3e-16
Identities = 17/159 (10%), Positives = 43/159 (27%), Gaps = 10/159 (6%)
Query: 566 RPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSL 625
R G R V + +++G + + + A +
Sbjct: 77 REGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYC---NHASFDNDYI--- 130
Query: 626 SAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMG 685
+ K ++ L + + + GD D A + +D+ +
Sbjct: 131 ---HIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD 187
Query: 686 IQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQK 724
+E + + +F + + + V +Q
Sbjct: 188 Y-LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 64.0 bits (155), Expect = 6e-13
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
Query: 141 VVRDGRR--RGLSIFDVVVGEVVCLKTGDQIPADGLFLNGH--SLKVDESSMTGESDRVE 196
V R R+ + + D+V G++V + GD++PAD L+ +L+VD+S +TGES V
Sbjct: 5 VYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVI 64
Query: 197 VDE------------KNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSI 235
K L SGT + AG +V + G+ST G++ +
Sbjct: 65 KHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.7 bits (120), Expect = 2e-07
Identities = 22/138 (15%), Positives = 45/138 (32%), Gaps = 11/138 (7%)
Query: 566 RPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSL 625
PG+R V + V V +++G +A + I + + +
Sbjct: 84 TPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI---------PATNVFANRLKFY 134
Query: 626 SAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMG 685
E E+ + +++ ++ + GDG D A AD + G
Sbjct: 135 FNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMI-GDGATDMEACPPADAFIGFG 193
Query: 686 -IQGTEVAKESSDIVIMD 702
+ K+++ I D
Sbjct: 194 GNVIRQQVKDNAKWYITD 211
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 47.5 bits (111), Expect = 2e-06
Identities = 20/150 (13%), Positives = 46/150 (30%), Gaps = 14/150 (9%)
Query: 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFR 623
G ++ +N G V +V+G I + G+ + +
Sbjct: 75 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKD-------- 126
Query: 624 SLSAEERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS 683
+ +E + + + + GDG ND + A + ++
Sbjct: 127 ----GKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIA 182
Query: 684 MGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713
+ KE +DI I + ++ ++
Sbjct: 183 FC--AKPILKEKADICIEKRDLREILKYIK 210
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 44.5 bits (104), Expect = 2e-05
Identities = 12/53 (22%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Query: 651 MVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDD 703
V + K + V GD ND L A G+ V +E +
Sbjct: 137 SVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHT 188
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 41.9 bits (97), Expect = 2e-04
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 662 VAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714
VA GDG ND A + +++ Q ++ KE++D V + +
Sbjct: 171 VAHVGDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 222
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 41.1 bits (95), Expect = 3e-04
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 662 VAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNN 721
V GD NDA L+ A +MG E K+ + D+N + V++ V +N
Sbjct: 209 VVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQA---VLDN 264
Query: 722 IQKF 725
F
Sbjct: 265 TYPF 268
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 40.3 bits (93), Expect = 5e-04
Identities = 27/199 (13%), Positives = 48/199 (24%), Gaps = 53/199 (26%)
Query: 567 PGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLS 626
++ S G+ V +++G+ + A+ I GI P N +
Sbjct: 23 TKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFF 82
Query: 627 AEERIAKI------------------ESIRVMARSSPLDKLLMVQSLKQKGHVV------ 662
+ E K P D + + + +G V+
Sbjct: 83 SNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYS 142
Query: 663 ----------------------------AVTGDGTNDAPALRAADIGLSMGIQGTEVAKE 694
V GD ND P + T+ K
Sbjct: 143 WHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPA-NATDNIKA 201
Query: 695 SSDIVIMDDNFSSVVTVLR 713
SD V + + +
Sbjct: 202 VSDFVSDYSYGEEIGQIFK 220
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 40.7 bits (94), Expect = 5e-04
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 660 HVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713
AV GD ND L AA G++MG E K +D V + ++ V +++
Sbjct: 231 ETAAV-GDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 282
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 39.2 bits (90), Expect = 0.001
Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 662 VAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713
+ GD ND + A +G+++ KE ++ V + V +
Sbjct: 216 IMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 266
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 38.4 bits (88), Expect = 0.003
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 648 KLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSS 707
+ L + +K +V GD ND A + ++M E KE+SDIV + +N S
Sbjct: 196 RFLRERMNWKKEEIVVF-GDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSG 253
Query: 708 VVTVLR 713
V VL
Sbjct: 254 VSYVLE 259
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 38.4 bits (88), Expect = 0.003
Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Query: 607 DVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSP---------LDKLLMVQSLKQ 657
+ ++ VI+ F + E+ + + R P K + + +
Sbjct: 137 SFEEASNKEVIQMTPFITEEEEKEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIR 196
Query: 658 KGHV----VAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713
+ GDG ND LR A IG++MG Q E K ++D V + + ++
Sbjct: 197 HFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMK 255
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 38.4 bits (88), Expect = 0.003
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 662 VAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVV 709
V V GD ND L ++ T+ AK + V+ + V
Sbjct: 226 VLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAV 272
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 941 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.97 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.93 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.93 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.9 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.88 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.85 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.35 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.31 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.29 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.28 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.23 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.19 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.13 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.1 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.1 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.97 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.92 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.9 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.86 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.85 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.78 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.76 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.24 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.23 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.64 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.51 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.46 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.46 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.4 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.36 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.23 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.1 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.01 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.65 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.38 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.37 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.33 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.33 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.13 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.05 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.99 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 95.98 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.95 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 95.48 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 95.39 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 94.96 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 94.96 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 94.95 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 94.26 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 94.24 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 93.59 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 93.26 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 92.68 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 92.37 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 90.91 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 83.51 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 80.29 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=5e-43 Score=401.97 Aligned_cols=428 Identities=22% Similarity=0.311 Sum_probs=335.0
Q ss_pred hhCCHHHHHHHhCCCCCCCCCccHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHhhhcccccCC
Q 047874 16 NLGGVNQVASILDCDTKGGIRGSEADLGHRINVFGRNRYKKPPAKRFISFVFEAFKDTTIIILLVCALLSLGFGIKQVGL 95 (941)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~f~~~~~~~lli~~~ls~~~~~~~~~~ 95 (941)
|-.++||+++.|+||+++|||++| |++|+++||+|++++++++++|+.++++|++|++++++++++++++.+....+.
T Consensus 5 h~~~~e~v~~~l~td~~~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 82 (472)
T d1wpga4 5 HSKSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 82 (472)
T ss_dssp GGSCHHHHHHHHTCCTTTCBCHHH--HHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred hhCCHHHHHHHhCcCcccCcCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhccc
Confidence 457999999999999999999987 999999999999999999999999999999999999999999999988655433
Q ss_pred --cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCEEeeeecCCcccCcEEEEcCCCeeecce
Q 047874 96 --KEGWFDGGSIIFAVFLVVSVSAVSNFKQSRQFQALANESSDIRVEVVRDGRRRGLSIFDVVVGEVVCLKTGDQIPADG 173 (941)
Q Consensus 96 --~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~ 173 (941)
...|+++..++++++++..++.++|++.++..+++.+...+. ..||++|+|
T Consensus 83 ~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~--------------------------~~~~~~P~d- 135 (472)
T d1wpga4 83 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA--------------------------TEQDKTPLQ- 135 (472)
T ss_dssp STTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC--------------------------CCCCCCHHH-
T ss_pred ccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc--------------------------ccccCchHH-
Confidence 247889999999999999999999999999988887653321 124444444
Q ss_pred EEEecceEEEeeccCCCCCCceecCCCCCeEeeccEEeeeeEEEEEEEEcccChhhHHHHhhcccCCCCChhHHHHHHHH
Q 047874 174 LFLNGHSLKVDESSMTGESDRVEVDEKNPFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSISHELNEETPLQARLNKLT 253 (941)
Q Consensus 174 ~ll~g~~l~Vdes~LTGEs~pv~k~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~ 253 (941)
.++++..
T Consensus 136 -------------------------------------------------------------------------~~l~~~g 142 (472)
T d1wpga4 136 -------------------------------------------------------------------------QKLDEFG 142 (472)
T ss_dssp -------------------------------------------------------------------------HHHHHHH
T ss_pred -------------------------------------------------------------------------HHHHHHH
Confidence 4444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCcccccCCccccccchhhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHH
Q 047874 254 SWIGKIGLTVAVLVLAVMLIRYFTGNTRDGMGKREFVGGKTKFDDVMNSVINIIAAAVTIIVVAIPEGLPLAVTLTLAFS 333 (941)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~~P~~L~~~~~~~~~~~ 333 (941)
..+......++...+... .+......... +....+.+.+..++++.++++|++||++++++++++
T Consensus 143 ~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------~~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~ 207 (472)
T d1wpga4 143 EQLSKVISLICVAVWLIN-----IGHFNDPVHGG----------SWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALG 207 (472)
T ss_dssp HHHHHHHHHHHHHHHHHC-----CTTSSSCCSSS----------CSSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-----HHHHHHHHhhh----------hhHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHH
Confidence 444333333332222221 11111100011 111245567888999999999999999999999999
Q ss_pred HHHHhhhhhhccCchhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCcccc
Q 047874 334 MKRMMKDHAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNV 413 (941)
Q Consensus 334 ~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 413 (941)
++||+|++++||+.+++|++|+..+.|+|||-
T Consensus 208 ~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i------------------------------------------------ 239 (472)
T d1wpga4 208 TRRMAKKNAIVRSLPSVETLGRAIYNNMKQFI------------------------------------------------ 239 (472)
T ss_dssp HHHHHTTTEEESCTTHHHHHTHHHHHHHHHHH------------------------------------------------
T ss_pred HHHHHhccchhhhHHHHHHHHHHHHHHhHHhh------------------------------------------------
Confidence 99999999999999999988888888877762
Q ss_pred ccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhh
Q 047874 414 YNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVM 493 (941)
Q Consensus 414 ~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~ 493 (941)
T Consensus 240 -------------------------------------------------------------------------------- 239 (472)
T d1wpga4 240 -------------------------------------------------------------------------------- 239 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccCCeEeeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCcchHHHH
Q 047874 494 CSHYYVKSGTIRILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRPGVRAAV 573 (941)
Q Consensus 494 c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I 573 (941)
T Consensus 240 -------------------------------------------------------------------------------- 239 (472)
T d1wpga4 240 -------------------------------------------------------------------------------- 239 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHHHHH
Q 047874 574 ESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLLMVQ 653 (941)
Q Consensus 574 ~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~ 653 (941)
T Consensus 240 -------------------------------------------------------------------------------- 239 (472)
T d1wpga4 240 -------------------------------------------------------------------------------- 239 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047874 654 SLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGRCVYNNIQKFLQFQLTVN 733 (941)
Q Consensus 654 ~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n 733 (941)
.|.++.|
T Consensus 240 -------------------------------------------------------------------------~~~l~~n 246 (472)
T d1wpga4 240 -------------------------------------------------------------------------RYLISSN 246 (472)
T ss_dssp -------------------------------------------------------------------------HHHHHHH
T ss_pred -------------------------------------------------------------------------hhhhhhh
Confidence 1111111
Q ss_pred HHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhHHHHHHhcccCCCCCccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHH
Q 047874 734 VAALVINFGAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSKPLITKIMWRNLISQAIYQVAIL 813 (941)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (941)
+..++..+++.+++.++|++|.|++|+|+++|++|+++++.|||++++|++||++++++++++.++.+++.++++.....
T Consensus 247 ~~~v~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~~~Pr~~~~~li~~~~~~~i~~~g~~~~~~~ 326 (472)
T d1wpga4 247 VGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAAT 326 (472)
T ss_dssp HHHHHHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGSCCCCTTCCSSCTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCccccHHHHHHHHHHhHHHHHHHHhcCCCchhhhcCCCCCCCccccCHHHHHHHHHHHHHHHHHH
Confidence 22223334456778899999999999999999999999999999999999999999999999999999999988877666
Q ss_pred HHHHHHhhcccCC------------------------------ccccchhHHHHHHHHHHHHHHhhhccCCcccccc-cC
Q 047874 814 LTLQFKGRSILGV------------------------------KESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFK-GI 862 (941)
Q Consensus 814 ~~~~~~~~~~~~~------------------------------~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~-~~ 862 (941)
+.++++...+... +..+++|++|.+++++|+++.+++|+.+ .++|+ ++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~rs~~-~s~~~~~~ 405 (472)
T d1wpga4 327 VGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSEN-QSLMRMPP 405 (472)
T ss_dssp HHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHHHHHHHHHHHHHHHTTSCSS-CCTTTSCG
T ss_pred HHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHHHHHHHHHHHHHHHHHHhcCC-cchhhcCc
Confidence 5554443221100 1245789999999999999999999954 55554 88
Q ss_pred cccHHHHHHHHHHHHHHHHHHH--HhhhcccccCCChHHHHHHHHHHHHHHHHHHHHHhccc
Q 047874 863 HKNKLFLAIIGITIALQLVMVE--FLKTFADTERLNWGQWAACIGIAAMSWPIGFLIKCIPV 922 (941)
Q Consensus 863 ~~n~~~~~~~~~~~~~~~~~~~--~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~ 922 (941)
++|+++++++++++++++++++ +++.+|++.|+++.+|+++++++++.++++|++|++.|
T Consensus 406 ~~N~~l~~av~i~~~l~~~i~yiP~l~~vf~~~pL~~~~w~i~l~~~~~~~~~~El~K~~~R 467 (472)
T d1wpga4 406 WVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIAR 467 (472)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHHSTTTHHHHTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999998888877754 57889999999999999999999999999999999976
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=1.2e-30 Score=252.31 Aligned_cols=150 Identities=40% Similarity=0.632 Sum_probs=142.8
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
||+|++++++|+.|+++||+++|+|||+..+|.++|+++||..++.+ .....++|.+++.+...+..+...+..+|+|
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 96 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEE--VADRAYTGREFDDLPLAEQREACRRACCFAR 96 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCC--CTTTEEEHHHHHHSCHHHHHHHHHHCCEEES
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccc--cccccccccccchhhHHHHhhhhhhhhhhhc
Confidence 99999999999999999999999999999999999999999876542 2456789999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHH
Q 047874 643 SSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWG 715 (941)
Q Consensus 643 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 715 (941)
++|++|..+|+.+|++|++|+|+|||.||++||++|||||+|+ ++++.++++||+++.++++..++++|+||
T Consensus 97 ~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 97 VEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999 89999999999999999999999999998
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.93 E-value=1e-26 Score=215.22 Aligned_cols=124 Identities=40% Similarity=0.573 Sum_probs=109.3
Q ss_pred EEEEEeccCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhh
Q 047874 555 LLGLVGLKDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKI 634 (941)
Q Consensus 555 ~lG~i~~~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 634 (941)
..+.++++|++|++++++|+.|+++||+++|+|||+..++.++|+++||..
T Consensus 12 ~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~----------------------------- 62 (135)
T d2b8ea1 12 GTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL----------------------------- 62 (135)
T ss_dssp CCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-----------------------------
T ss_pred eEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh-----------------------------
Confidence 345789999999999999999999999999999999999999999999964
Q ss_pred cCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 635 ESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 635 ~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
++++++|++|..+++.+|+. +.|+|+|||.||+|||++||+||+|+ ++++.++++||+++.++++..++++|+
T Consensus 63 ----v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 63 ----VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp ----EECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred ----hccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 89999999999999999875 68999999999999999999999999 899999999999999999999998874
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.93 E-value=8.3e-26 Score=229.56 Aligned_cols=195 Identities=19% Similarity=0.250 Sum_probs=148.5
Q ss_pred eEEEEEEeCCcccccccc------hhhhhHHHHHHHHHHHhccCccccccCCCC---CCccccCCccHHHHHHHHHHhcC
Q 047874 372 MKVTEFWLGKEAMKSDAC------SLELAQNLYELLQEAVGLNTTGNVYNSNSL---STSEITGSPTEKAILSWAMIDLG 442 (941)
Q Consensus 372 ~~v~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~p~e~al~~~~~~~~~ 442 (941)
|+|+++|.++..+..+.. .........+.+..++++|+.+.+...... ......|||+|.||+.++. +.|
T Consensus 2 MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~-~~~ 80 (214)
T d1q3ia_ 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIE-LSC 80 (214)
T ss_dssp CEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHH-HHH
T ss_pred eEEEEEEECCEEEEcCCCCcCCCcccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHH-HhC
Confidence 889999988876653321 111223345556777888888776543221 2345689999999999998 778
Q ss_pred CCCcCcccccceeEEeCCCCCCCcEEEEEEecC-CceEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHH
Q 047874 443 MNVDEPKQYCTVINVEAFNSEKKRSGVLMKRIN-EKVFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQE 521 (941)
Q Consensus 443 ~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~-~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~ 521 (941)
.+....+..++++.++||+|+||+|+++++..+ ++.+.+|+|||||.|+++|+++.. +|...+++++.++.+.+..++
T Consensus 81 ~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~ 159 (214)
T d1q3ia_ 81 GSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLE 159 (214)
T ss_dssp SCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHH
T ss_pred CCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHHHHHHHH
Confidence 888777888999999999999999999998754 356889999999999999998875 788999999999999999999
Q ss_pred HHhcccceeeeeeeccccccccc-------hhhhhccCcEEEEEEeccCCCCcc
Q 047874 522 MAAKSLRCIAFAHTKAAEADGQV-------QEKLEETGLTLLGLVGLKDPCRPG 568 (941)
Q Consensus 522 ~~~~g~r~l~~a~~~~~~~~~~~-------~~~~~e~~l~~lG~i~~~d~~~~~ 568 (941)
|+.+|+||+++|||+++..+... ..+..|+||+|+|+++++||||++
T Consensus 160 ~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 160 LGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp HHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred HhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 99999999999999987654332 134457899999999999999975
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.90 E-value=1.3e-24 Score=193.67 Aligned_cols=98 Identities=35% Similarity=0.542 Sum_probs=88.9
Q ss_pred eEEEEECCEE--eeeecCCcccCcEEEEcCCCeeecceEEEe--cceEEEeeccCCCCCCceecCC------------CC
Q 047874 138 RVEVVRDGRR--RGLSIFDVVVGEVVCLKTGDQIPADGLFLN--GHSLKVDESSMTGESDRVEVDE------------KN 201 (941)
Q Consensus 138 ~~~V~R~g~~--~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~--g~~l~Vdes~LTGEs~pv~k~~------------~~ 201 (941)
.++|+|+|++ ++|+++||+|||+|.|++||+|||||+|++ +.++.||||+|||||.|+.|.. ..
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5789999975 689999999999999999999999999986 4457899999999999999863 35
Q ss_pred CeEeeccEEeeeeEEEEEEEEcccChhhHHHHhh
Q 047874 202 PFLLSGTKVTAGYGFMLVTSVGMSTAWGEMMSSI 235 (941)
Q Consensus 202 ~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 235 (941)
|++|+||.+.+|+++++|++||.+|.+|||.+++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 7899999999999999999999999999998753
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.88 E-value=3.8e-28 Score=269.69 Aligned_cols=326 Identities=13% Similarity=0.060 Sum_probs=211.9
Q ss_pred chhhhhccCeeEEEeCcccccccCceEEEEEEeCCcccccccchhhhhHHHHHHHHHHHhccCccccccCCCCCCccccC
Q 047874 347 LSACETMGSATTICTDKTGTLTLNQMKVTEFWLGKEAMKSDACSLELAQNLYELLQEAVGLNTTGNVYNSNSLSTSEITG 426 (941)
Q Consensus 347 ~~~~e~Lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (941)
..+.|.||..+++|+|||||+|.|+|++..+..+......+ .....+ .++++. ...+|+.+... ...+
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k--~~g~n~-~~dl~~-~~~~~~~~~~~--------~~~~ 97 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLK--SLGLNS-NWDMLF-IVFSIHLIDIL--------KKLS 97 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHH--HTTCCC-HHHHHH-HHHHHHHHHHH--------TTSC
T ss_pred hhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhh--hcCCCh-hHHHHH-HHHHHHHHHHH--------hhcC
Confidence 45679999999999999999999999775432111100000 000000 122221 11122221111 1245
Q ss_pred CccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeEee
Q 047874 427 SPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTIRI 506 (941)
Q Consensus 427 ~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~~~ 506 (941)
+|.+.+++.... ..+......+..+.....+||++.+++|++.....+ ..+....+|+++.+.
T Consensus 98 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~-~~~~~~~~~a~~~~~--------------- 160 (380)
T d1qyia_ 98 HDEIEAFMYQDE-PVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN-NIYAALEEFATTELH--------------- 160 (380)
T ss_dssp HHHHHHHHHCSS-CHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHH-HHHHHHHHHHHHHTT---------------
T ss_pred CCcHHHHHHHHh-hccchHHHHHHhccccccCCcchHHHHHhhhccccc-chhHhhhhccHhhcC---------------
Confidence 677777765432 222233344555666778899999999987654322 223334456655542
Q ss_pred CCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCCc--chHHHHHHHHhcCCeEE
Q 047874 507 LDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCRP--GVRAAVESCRNAGVNVK 584 (941)
Q Consensus 507 l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~--~~~~~I~~l~~aGi~v~ 584 (941)
+++..+..+.....+++++|+|++++|++..+..+.. ...+....|++..+++++| +++++++.|+++|++++
T Consensus 161 ~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~~-----~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~ 235 (380)
T d1qyia_ 161 VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKK-----IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELG 235 (380)
T ss_dssp CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHCS-----CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEE
T ss_pred CcHHHHHHHHhHHHHHHHHHHHHHHHhhhcccccccc-----cchhhHhcccccccccccchhhHHHHHHHHHHCCCeEE
Confidence 1223344556677889999999999999865432221 1223345688889998655 99999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHH---------HHHHhhcCceEEEecCHHHHHHHHHHH
Q 047874 585 MVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAE---------ERIAKIESIRVMARSSPLDKLLMVQSL 655 (941)
Q Consensus 585 i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~---------~~~~~~~~~~v~~~~~p~~K~~iv~~l 655 (941)
|+|||+..+|..+++++|+.... ....++++.+....... .-...+.....+++.+|++|..+++.+
T Consensus 236 i~Tg~~~~~a~~il~~lgl~~~F----~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~ 311 (380)
T d1qyia_ 236 IATGRPYTETVVPFENLGLLPYF----EADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDN 311 (380)
T ss_dssp EECSSCHHHHHHHHHHHTCGGGS----CGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTT
T ss_pred EECCCCHHHHHHHHHHcCCcccC----CcceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 99999999999999999996421 12234444432110000 000111122357899999999999999
Q ss_pred HhCCCEEEEEcCCccCHHHHHhCC---ccEEecCCCcHHHHh----ccCEEeccCCchHHHHHH
Q 047874 656 KQKGHVVAVTGDGTNDAPALRAAD---IGLSMGIQGTEVAKE----SSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 656 ~~~g~~v~~iGDg~ND~~~l~~A~---vgIam~~~~~~~a~~----~ad~vl~~~~~~~i~~~i 712 (941)
+..++.|+|+|||.||++|.++|| |||+||..+++..++ .||+++. ++..+.+++
T Consensus 312 ~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~--~~~el~~il 373 (380)
T d1qyia_ 312 IVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVIN--HLGELRGVL 373 (380)
T ss_dssp CSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEES--SGGGHHHHH
T ss_pred CCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEEC--CHHHHHHHH
Confidence 999999999999999999999999 999999777665444 7999995 677776554
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.85 E-value=3.6e-21 Score=198.67 Aligned_cols=162 Identities=22% Similarity=0.259 Sum_probs=132.0
Q ss_pred HHHHHHHHhccCccccccCCCCCCccccCCccHHHHHHHHHHhcCCCCcCc----------------ccccceeEEeCCC
Q 047874 398 YELLQEAVGLNTTGNVYNSNSLSTSEITGSPTEKAILSWAMIDLGMNVDEP----------------KQYCTVINVEAFN 461 (941)
Q Consensus 398 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~----------------~~~~~~l~~~~F~ 461 (941)
.+.+..+.++||++.+........+...|+|+|.||+.++. +.|.+.... +..++++.++||+
T Consensus 50 l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~-k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~ 128 (239)
T d1wpga3 50 LVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVE-KMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFS 128 (239)
T ss_dssp HHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHH-HHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHH-HhCCChHHhhccchhhhhccchhhhhhhCeEEEEeeec
Confidence 34455677788888776555556667889999999999998 788766543 3467889999999
Q ss_pred CCCCcEEEEEEecCCc----eEEEEecCcHHHHHhhcccccccCCeEeeCCHHHHHHHHHHHHHH--Hhcccceeeeeee
Q 047874 462 SEKKRSGVLMKRINEK----VFHTHWKGAAEMILVMCSHYYVKSGTIRILDGEERTQIEKIIQEM--AAKSLRCIAFAHT 535 (941)
Q Consensus 462 s~~k~~sviv~~~~~~----~~~~~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~--~~~g~r~l~~a~~ 535 (941)
|+||||+++++..+++ .+.+|+|||||.|+++|+.++. +|...+++++.++.+.+..+++ +++|+||+++|||
T Consensus 129 S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k 207 (239)
T d1wpga3 129 RDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATR 207 (239)
T ss_dssp TTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEE
T ss_pred ccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEE
Confidence 9999999999876543 3689999999999999998776 6778899999999999999887 6799999999999
Q ss_pred ccccccccc------hhhhhccCcEEEEEEec
Q 047874 536 KAAEADGQV------QEKLEETGLTLLGLVGL 561 (941)
Q Consensus 536 ~~~~~~~~~------~~~~~e~~l~~lG~i~~ 561 (941)
+++...... .....|+||+|+|++++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 208 DTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp SSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred ECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 987554332 23456899999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.35 E-value=1.6e-12 Score=132.34 Aligned_cols=152 Identities=18% Similarity=0.210 Sum_probs=107.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchh----------------------
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQ---------------------- 621 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~---------------------- 621 (941)
.+.+.+.++|++|+++|++++++|||+...+..++...++..+-...........+..
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 4678899999999999999999999999999999999998653110000000000000
Q ss_pred -----------------cccCCHHHHH---HhhcC-c-------eEEEecCHHHHHHHHHHHHhC----CCEEEEEcCCc
Q 047874 622 -----------------FRSLSAEERI---AKIES-I-------RVMARSSPLDKLLMVQSLKQK----GHVVAVTGDGT 669 (941)
Q Consensus 622 -----------------~~~~~~~~~~---~~~~~-~-------~v~~~~~p~~K~~iv~~l~~~----g~~v~~iGDg~ 669 (941)
-.....+.+. +.... . .+-.......|...++.+.++ .+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 0000111111 21111 1 122233445788888877654 56799999999
Q ss_pred cCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHHHH
Q 047874 670 NDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRWGR 716 (941)
Q Consensus 670 ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR 716 (941)
||.+|++.||+||||+ |+.+.+|+.||+++.+++.+++++++++..
T Consensus 179 NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp GGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999887654
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.31 E-value=3.8e-12 Score=129.40 Aligned_cols=151 Identities=17% Similarity=0.197 Sum_probs=106.5
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecch---------------------
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGV--------------------- 620 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~--------------------- 620 (941)
+.++.+++.+++++|++.|++++++|||+...+..+++.+|+..+-... +...+.+..
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGE-NGGIMFDNDGSIKKFFSNEGTNKFLEEMSK 96 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEG-GGTEEECTTSCEEESSCSHHHHHHHHHHTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEee-cceEEEeCCccEEEecChHHHHHHHHHHHH
Confidence 3457789999999999999999999999999999999999986531100 000000000
Q ss_pred -------------------hcccCCHHHHHHhhc--CceEE-----Ee--cCHHHHHHHHHHHHhC----CCEEEEEcCC
Q 047874 621 -------------------QFRSLSAEERIAKIE--SIRVM-----AR--SSPLDKLLMVQSLKQK----GHVVAVTGDG 668 (941)
Q Consensus 621 -------------------~~~~~~~~~~~~~~~--~~~v~-----~~--~~p~~K~~iv~~l~~~----g~~v~~iGDg 668 (941)
.......+.+..... ...++ .. ....+|...++.+.+. .+.|+++|||
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs 176 (225)
T d1l6ra_ 97 RTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDS 176 (225)
T ss_dssp TSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCS
T ss_pred hcCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCC
Confidence 000000111111111 11111 11 2235788888877654 4569999999
Q ss_pred ccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 669 TNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 669 ~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.||.+|++.||+||||+ |+.+.+++.||+++..++..++.+++++
T Consensus 177 ~nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 177 NNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred cchHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999 9999999999999999999999998874
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.29 E-value=2.2e-12 Score=135.21 Aligned_cols=66 Identities=21% Similarity=0.265 Sum_probs=60.9
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
+|...++.+++. ...++++|||.||.+||+.|+.|+||+ |+.+.+|+.||+++.+++.++++++++
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 699999988775 457999999999999999999999999 999999999999999999999998886
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.28 E-value=2.6e-12 Score=135.64 Aligned_cols=67 Identities=27% Similarity=0.362 Sum_probs=61.6
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
+|+..++.+.+. .+.|+++|||.||.+||+.|+.||||+ |+.+.+++.||+++.+++.+++.++|++
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 799999998765 357999999999999999999999999 9999999999999999999999998864
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.23 E-value=4.3e-12 Score=132.84 Aligned_cols=67 Identities=27% Similarity=0.374 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 646 LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 646 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
.+|...++.++++ .+.|+++|||.||.+||+.|+.||||+ |+.+.+|+.||+++.+++.+++++.|+
T Consensus 189 ~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 189 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 3699999888765 357999999999999999999999999 999999999999999999999998886
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.19 E-value=5.3e-12 Score=131.45 Aligned_cols=68 Identities=26% Similarity=0.321 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 646 LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 646 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.+|...++.+.++ .+.++++|||.||.+||+.||.||||+ |+.+.+|+.||+++.+++.++++++|++
T Consensus 185 ~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 3799988888764 468999999999999999999999999 9999999999999999999999999865
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.13 E-value=7.8e-11 Score=113.43 Aligned_cols=101 Identities=19% Similarity=0.242 Sum_probs=84.7
Q ss_pred HHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecCHHHHHH
Q 047874 571 AAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSSPLDKLL 650 (941)
Q Consensus 571 ~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 650 (941)
.+|+.++..|+.+.++||+....+...++++++.. ++... .+|..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~---------------------------------~~~~~--~~K~~ 83 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL---------------------------------FFLGK--LEKET 83 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------EEESC--SCHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------ccccc--ccHHH
Confidence 48999999999999999999999999999999863 33322 35555
Q ss_pred HHHHHHh----CCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchH
Q 047874 651 MVQSLKQ----KGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSS 707 (941)
Q Consensus 651 iv~~l~~----~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~ 707 (941)
.++.+.+ ..+.|+++||+.||.+||+.|++|+||+ ++.+.+++.||+|+.++.=.+
T Consensus 84 ~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~G 143 (177)
T d1k1ea_ 84 ACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKG 143 (177)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTT
T ss_pred HHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCc
Confidence 5554443 2578999999999999999999999999 999999999999999876444
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.10 E-value=6.9e-11 Score=123.30 Aligned_cols=66 Identities=33% Similarity=0.410 Sum_probs=60.2
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 647 DKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 647 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
+|...++.+.+. ...|+++|||.||.+||+.||+||||+ |+.+.+|+.||+++.+++.++++++|+
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 688888888664 356999999999999999999999999 999999999999999999999998885
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.10 E-value=6e-11 Score=124.66 Aligned_cols=67 Identities=24% Similarity=0.293 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHhC----CCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccC-CchHHHHHHH
Q 047874 646 LDKLLMVQSLKQK----GHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDD-NFSSVVTVLR 713 (941)
Q Consensus 646 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~-~~~~i~~~i~ 713 (941)
..|...++.+.+. .+.|+++|||.||.+||+.||.|+||+ |+.+.+|+.||+++.++ +..++.++++
T Consensus 206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred chhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 3677777777654 468999999999999999999999999 99999999999999754 4555776664
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.97 E-value=4e-10 Score=113.34 Aligned_cols=126 Identities=21% Similarity=0.206 Sum_probs=90.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
+++|++.+.|+.||++|++++++||.....+.++++.+|+...+.....-....+|....... .....
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~------------~~p~~ 149 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDE------------TQPTA 149 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECT------------TSGGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhcccccee------------eeeee
Confidence 367999999999999999999999999999999999999974211000000000111000000 00013
Q ss_pred CHHHHHHHHHHHHhC--CCEEEEEcCCccCHHHHHhCCccEEecCC-CcHHHHhccCEEec
Q 047874 644 SPLDKLLMVQSLKQK--GHVVAVTGDGTNDAPALRAADIGLSMGIQ-GTEVAKESSDIVIM 701 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~--g~~v~~iGDg~ND~~~l~~A~vgIam~~~-~~~~a~~~ad~vl~ 701 (941)
.+..|.++++.++++ -+.++++|||.||.+|++.||++||++.+ .....++.||+++.
T Consensus 150 ~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~ 210 (217)
T d1nnla_ 150 ESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT 210 (217)
T ss_dssp STTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES
T ss_pred ccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC
Confidence 457899999999764 35799999999999999999999999844 34567788999986
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.92 E-value=1.6e-09 Score=110.57 Aligned_cols=44 Identities=7% Similarity=0.054 Sum_probs=40.1
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILN 605 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~ 605 (941)
.+...+.++++|++|+++|++++++|||+...+..+.+++++..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 45556789999999999999999999999999999999999875
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.90 E-value=1.2e-09 Score=111.80 Aligned_cols=146 Identities=15% Similarity=0.163 Sum_probs=98.8
Q ss_pred chHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC-Ccccceecchhcc---------c-------------
Q 047874 568 GVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDL-NKDEAVIEGVQFR---------S------------- 624 (941)
Q Consensus 568 ~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~-~~~~~~~~g~~~~---------~------------- 624 (941)
+..+++.++++.|+.++++|||+...+..+.+++++..++... .....+....... .
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGF 101 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhc
Confidence 4455667778899999999999999999999999997653211 0000111000000 0
Q ss_pred -----------------------CC---HHHHHHhhcC----ce--------EEEecCHHHHHHHHHHHHhC----CCEE
Q 047874 625 -----------------------LS---AEERIAKIES----IR--------VMARSSPLDKLLMVQSLKQK----GHVV 662 (941)
Q Consensus 625 -----------------------~~---~~~~~~~~~~----~~--------v~~~~~p~~K~~iv~~l~~~----g~~v 662 (941)
.. .+++...... .. +-......+|...++.+.+. .+.|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~ 181 (244)
T d1s2oa1 102 EALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQT 181 (244)
T ss_dssp TTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred ccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhE
Confidence 00 0111111111 11 11122345799999988775 3569
Q ss_pred EEEcCCccCHHHHHhCCccEEecCCCcHHHHhccC-------EEeccCCchHHHHHHHH
Q 047874 663 AVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSD-------IVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 663 ~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad-------~vl~~~~~~~i~~~i~~ 714 (941)
+++|||.||.+||+.||.|++|+ |+.+.+++.|| ++...++..++.++|++
T Consensus 182 v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 182 LVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp EEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 99999999999999999999999 99999999888 67777788899988764
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.86 E-value=1.2e-09 Score=110.56 Aligned_cols=148 Identities=11% Similarity=0.055 Sum_probs=104.2
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
+++|++.+.++.|+++|+++.++|+.....+..+.+++|+...-. ......++....... ...........
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~---an~~~~~~~~~~~~~------~~~~~~~~~~~ 145 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIY---CNHASFDNDYIHIDW------PHSCKGTCSNQ 145 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEE---EEEEECSSSBCEEEC------TTCCCTTCCSC
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCcccee---eeeEEEeCCcceecc------ccccccccccC
Confidence 467999999999999999999999999999999999998753100 000011111000000 00001123456
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhc-cCEEeccCCchHHHHHHHHHHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKES-SDIVIMDDNFSSVVTVLRWGRCVYNNI 722 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~-ad~vl~~~~~~~i~~~i~~gR~~~~~i 722 (941)
.|..|..+++.++..++.|+++||+.||.+|+++||+++|++ ...+.+++. .++ ..-++|+.+...+++-....+.+
T Consensus 146 k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~-~~~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 146 CGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNH-LPYQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp CSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCE-ECCSSHHHHHHHHHTSHHHHHHH
T ss_pred CHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEec-chHHHHHHcCCCe-eecCCHHHHHHHHHHHHHHHHHh
Confidence 788999999999999999999999999999999999999998 555555544 444 33458898888887655554433
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.85 E-value=1.7e-09 Score=107.40 Aligned_cols=130 Identities=15% Similarity=0.157 Sum_probs=93.4
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
.++.+++.+.++.++..|..++++||.....+....++.+....- ........... ......
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~------------~~~~~~ 135 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAF------ANRLIVKDGKL------------TGDVEG 135 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEE------EEEEEEETTEE------------EEEEEC
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhh------hhhhccccccc------------cccccc
Confidence 367789999999999999999999999999999999998876420 00000000000 000000
Q ss_pred --cCHHHHHHHHHH----HHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHH
Q 047874 643 --SSPLDKLLMVQS----LKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 643 --~~p~~K~~iv~~----l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
..+..|...+.. ++-..+.++++|||.||.+|++.||+|||| |+.+..++.||+++.++++++|+++|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 136 EVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp SSCSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred cccccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 112233333333 333356899999999999999999999999 68899999999999999999988664
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.78 E-value=9.7e-09 Score=101.53 Aligned_cols=130 Identities=14% Similarity=0.072 Sum_probs=93.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
+..++....++.+ +.+.+.+++|+.............++..... ....... ..........
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~------~~l~~~~------------~~~~~~~~~~ 129 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLC------HKLEIDD------------SDRVVGYQLR 129 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEE------EEEEECT------------TSCEEEEECC
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhc------ceeeeec------------cccccccccc
Confidence 3455666666665 5789999999999999999999998864211 0000000 0011133445
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.+..+...++.++...+.|+|+|||.||++||+.||+||||+ +..++.++++|+++. ++++++.++|.+
T Consensus 130 ~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp SSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred chhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 566677788888888999999999999999999999999996 666677788888775 567777766654
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.76 E-value=9.9e-09 Score=103.60 Aligned_cols=43 Identities=12% Similarity=0.041 Sum_probs=39.6
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILN 605 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~ 605 (941)
..+.+.+++++++|+++|+.++++|||+...+..+.+++|+..
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence 3467889999999999999999999999999999999999864
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.24 E-value=6.1e-07 Score=89.74 Aligned_cols=62 Identities=18% Similarity=0.374 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccCEEeccCCchHHHHHHH
Q 047874 646 LDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 646 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
.+|+..++.+.+. +.++++||+.||.+||+.|+.|+||+ +|.. +..|++.+. +...+..+++
T Consensus 158 ~~Kg~al~~l~~~-~~~i~~GDs~ND~~Mf~~~~~~~av~-~g~~--~~~A~~~~~--~~~ev~~~l~ 219 (229)
T d1u02a_ 158 VNKGSAIRSVRGE-RPAIIAGDDATDEAAFEANDDALTIK-VGEG--ETHAKFHVA--DYIEMRKILK 219 (229)
T ss_dssp CCHHHHHHHHHTT-SCEEEEESSHHHHHHHHTTTTSEEEE-ESSS--CCCCSEEES--SHHHHHHHHH
T ss_pred CCHHHHHHHHhcc-ccceeecCCCChHHHHhccCCeEEEE-eCCC--CccCeEEcC--CHHHHHHHHH
Confidence 4799999999876 56789999999999999997776665 3322 457899986 3444554443
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.23 E-value=1.2e-07 Score=95.79 Aligned_cols=55 Identities=22% Similarity=0.300 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHhC-CCEEEEEcC----CccCHHHHHhCC-ccEEecCCCcHHHHhccCEEec
Q 047874 646 LDKLLMVQSLKQK-GHVVAVTGD----GTNDAPALRAAD-IGLSMGIQGTEVAKESSDIVIM 701 (941)
Q Consensus 646 ~~K~~iv~~l~~~-g~~v~~iGD----g~ND~~~l~~A~-vgIam~~~~~~~a~~~ad~vl~ 701 (941)
.+|+..++.+.+. .+.|+++|| |.||.+||++|+ .|+||+ |+.+.+|..+|++++
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~~ 244 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFP 244 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCT
T ss_pred ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcCC
Confidence 4799999999764 668999999 469999999997 699999 999999999998763
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.64 E-value=7.2e-05 Score=74.26 Aligned_cols=125 Identities=18% Similarity=0.147 Sum_probs=82.2
Q ss_pred CCcchHHHHHHHHhcC-CeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 565 CRPGVRAAVESCRNAG-VNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aG-i~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
+-|++.++++.|++.| +++.++|+.....+..+.+..|+... .+.++.+.+...- .-
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~------fd~i~~~~~~~~~----------------k~ 149 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHY------FPFGAFADDALDR----------------NE 149 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTT------CSCEECTTTCSSG----------------GG
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccc------ccccccccccccc----------------cc
Confidence 3579999999999987 89999999999999999999999752 1122222211100 00
Q ss_pred CHHHHHHHHHHHHh---CCCEEEEEcCCccCHHHHHhCCc---cEEecCCCcHH-HHhccCEEeccCCchHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQ---KGHVVAVTGDGTNDAPALRAADI---GLSMGIQGTEV-AKESSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 644 ~p~~K~~iv~~l~~---~g~~v~~iGDg~ND~~~l~~A~v---gIam~~~~~~~-a~~~ad~vl~~~~~~~i~~~i~ 713 (941)
.|.--...++.+.. ..+.++||||+.+|..|-+.||+ +|+-|....+. .+..+|+++. +++.+.++|.
T Consensus 150 ~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~el~~~l~ 224 (228)
T d2hcfa1 150 LPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred hhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEEC--CHHHHHHHHH
Confidence 11111222333322 24689999999999999999995 44445323332 3446899986 7777776654
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.51 E-value=7.5e-05 Score=73.46 Aligned_cols=116 Identities=16% Similarity=0.218 Sum_probs=82.2
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.|++.++++.|+++|+++.++|+.+...+..+.+.+|+... ...++.+.+.. .++-.
T Consensus 89 ~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~------F~~i~~~~~~~----------------~~Kp~ 146 (218)
T d1te2a_ 89 LLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS------FDALASAEKLP----------------YSKPH 146 (218)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG------CSEEEECTTSS----------------CCTTS
T ss_pred ccchHHHHHHHhhhcccccccccccccccccccccccccccc------ccccccccccc----------------cchhh
Confidence 458999999999999999999999999999999999999641 12233333221 11223
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecC--CCcHHHHhccCEEecc
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGI--QGTEVAKESSDIVIMD 702 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~--~~~~~a~~~ad~vl~~ 702 (941)
|+-=..+++.+.-..+.+++|||+.+|..|-+.||+. |++.. ...+.....||+++.+
T Consensus 147 ~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~ 207 (218)
T d1te2a_ 147 PQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS 207 (218)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC
T ss_pred HHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECC
Confidence 4444566666665677899999999999999999974 34421 1122233568888773
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.46 E-value=8.6e-05 Score=75.95 Aligned_cols=136 Identities=14% Similarity=0.158 Sum_probs=80.8
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEE-e
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMA-R 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~-~ 642 (941)
++|+|+++.++.|++.|+++.++||--..-...+++++|+..++...-......++..+.. ..-. -
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~-------------~~~~~~ 201 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLK-------------GFKGEL 201 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEE-------------EECSSC
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEe-------------eccCCc
Confidence 4899999999999999999999999999999999999998764321000000000000000 0000 0
Q ss_pred cCHHHHHHHH----HHHHh--CCCEEEEEcCCccCHHHHHh---CCccEEecC-CCc-----HHHHhccCEEeccCCchH
Q 047874 643 SSPLDKLLMV----QSLKQ--KGHVVAVTGDGTNDAPALRA---ADIGLSMGI-QGT-----EVAKESSDIVIMDDNFSS 707 (941)
Q Consensus 643 ~~p~~K~~iv----~~l~~--~g~~v~~iGDg~ND~~~l~~---A~vgIam~~-~~~-----~~a~~~ad~vl~~~~~~~ 707 (941)
.....|...+ ..++. ....|.++|||.||..|.+. ++.++++|- +.. +.-.++-|+|+.++.--.
T Consensus 202 i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~ 281 (291)
T d2bdua1 202 IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLE 281 (291)
T ss_dssp CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCH
T ss_pred cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChh
Confidence 0112232221 22222 35689999999999999874 344444442 222 123467799988765554
Q ss_pred HHHHH
Q 047874 708 VVTVL 712 (941)
Q Consensus 708 i~~~i 712 (941)
++..|
T Consensus 282 v~~~i 286 (291)
T d2bdua1 282 VVNSI 286 (291)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44333
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.46 E-value=5.5e-05 Score=74.67 Aligned_cols=124 Identities=16% Similarity=0.263 Sum_probs=87.1
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.+++.+.++.|++.|+++.++|+.....+..+.+++|+... ...++.+.+... ....
T Consensus 96 l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~------f~~~~~~~~~~~----------------~kp~ 153 (224)
T d2hsza1 96 LYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL------FSEMLGGQSLPE----------------IKPH 153 (224)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG------CSEEECTTTSSS----------------CTTS
T ss_pred hHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhh------cccccccccccc----------------cccc
Confidence 479999999999999999999999999999999999998642 112222221110 1223
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEec--CC-CcHHHHhccCEEeccCCchHHHHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMG--IQ-GTEVAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~--~~-~~~~a~~~ad~vl~~~~~~~i~~~i 712 (941)
|+--..+.+.++-..+.+++|||+.+|..+-+.||+ .|.+. .+ ..+.....+|+++. ++..+.++|
T Consensus 154 p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~--~l~dL~~ii 223 (224)
T d2hsza1 154 PAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILKIT 223 (224)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGGGT
T ss_pred chhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEEC--CHHHHHHhh
Confidence 444455666666667889999999999999999997 45543 11 12334556899886 666665443
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.40 E-value=0.0002 Score=72.37 Aligned_cols=126 Identities=16% Similarity=0.184 Sum_probs=87.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.++++.|+++|+++.++||.+...+..+.+.+|+..-. ...++.+.+.. ..+-
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f-----~d~~~~~d~~~----------------~~KP 157 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-----PDFLVTPDDVP----------------AGRP 157 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-----CSCCBCGGGSS----------------CCTT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccc-----ccccccccccc----------------cccc
Confidence 46799999999999999999999999999999999999986421 12233333211 1122
Q ss_pred CHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHHHhCCcc-EEecCCCcH---------------------------HHHh
Q 047874 644 SPLDKLLMVQSLKQK-GHVVAVTGDGTNDAPALRAADIG-LSMGIQGTE---------------------------VAKE 694 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~---------------------------~a~~ 694 (941)
.|+.=...++.+.-. .+.|+||||+.+|+.+=+.||+- |++. .|.. ..+.
T Consensus 158 ~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (257)
T d1swva_ 158 YPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVI-LGSSELGLTEEEVENMDSVELREKIEVVRNRFVEN 236 (257)
T ss_dssp SSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEEC-TTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEc-cCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhC
Confidence 444555666666543 46899999999999999999973 4453 2210 0112
Q ss_pred ccCEEeccCCchHHHHHHH
Q 047874 695 SSDIVIMDDNFSSVVTVLR 713 (941)
Q Consensus 695 ~ad~vl~~~~~~~i~~~i~ 713 (941)
.||+++. ++..+..+|+
T Consensus 237 gad~vi~--~l~eL~~ii~ 253 (257)
T d1swva_ 237 GAHFTIE--TMQELESVME 253 (257)
T ss_dssp TCSEEES--SGGGHHHHHH
T ss_pred CCCEEEC--CHHHHHHHHH
Confidence 3899997 7777777664
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.36 E-value=1.2e-05 Score=80.70 Aligned_cols=50 Identities=20% Similarity=0.325 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhC-CCEEEEEcC----CccCHHHHHhCC-ccEEecCCCcHHHHhccC
Q 047874 646 LDKLLMVQSLKQK-GHVVAVTGD----GTNDAPALRAAD-IGLSMGIQGTEVAKESSD 697 (941)
Q Consensus 646 ~~K~~iv~~l~~~-g~~v~~iGD----g~ND~~~l~~A~-vgIam~~~~~~~a~~~ad 697 (941)
.+|...++.+.+. .+.|+++|| |.||.+||++|+ .|++++ + .+..++.++
T Consensus 184 vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~-~~~~~~~~~ 239 (243)
T d2amya1 184 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-A-PEDTRRICE 239 (243)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-S-HHHHHHHHH
T ss_pred cCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-C-HHHHHHHHH
Confidence 3687777777553 578999999 789999999998 678776 4 455555544
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.23 E-value=0.00061 Score=64.74 Aligned_cols=135 Identities=16% Similarity=0.111 Sum_probs=78.4
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHH---------------HHHHHHcCCCCCCCCCCcccceecchhcccCCHHH
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTA---------------RAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEE 629 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a---------------~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~ 629 (941)
+-|++.++++.|+++|++++++|..+.... .......|+..... ..+.+..+ ...
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~cp~~p~--~~~--- 97 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGI-----YYCPHHPQ--GSV--- 97 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEE-----EEECCBTT--CSS---
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccce-----eecccccc--ccc---
Confidence 458999999999999999999999874211 11222223221100 00000000 000
Q ss_pred HHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc--EEec--CCCcHHHHhccCEEeccCCc
Q 047874 630 RIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG--LSMG--IQGTEVAKESSDIVIMDDNF 705 (941)
Q Consensus 630 ~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg--Iam~--~~~~~~a~~~ad~vl~~~~~ 705 (941)
........+..-.|.--..+.+.+.-..+.++||||..+|..|=+.|+++ +.+. ....+.....||+++. ++
T Consensus 98 --~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~--~l 173 (182)
T d2gmwa1 98 --EEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SL 173 (182)
T ss_dssp --GGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CG
T ss_pred --ccccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEEC--CH
Confidence 00000000112234444556666665567899999999999999999985 3333 1223455667999987 78
Q ss_pred hHHHHHHH
Q 047874 706 SSVVTVLR 713 (941)
Q Consensus 706 ~~i~~~i~ 713 (941)
..+.++|+
T Consensus 174 ~dl~~~ik 181 (182)
T d2gmwa1 174 ADLPQAIK 181 (182)
T ss_dssp GGHHHHHH
T ss_pred HHHHHHhc
Confidence 88888775
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.10 E-value=0.00024 Score=69.15 Aligned_cols=121 Identities=15% Similarity=0.080 Sum_probs=81.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.++..| ++.++|+.+...+..+.+.+|+... ...++.+.+. ...
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~------fd~v~~~~~~------------------~~~ 138 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHF------FDGIYGSSPE------------------APH 138 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGG------CSEEEEECSS------------------CCS
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccc------cccccccccc------------------ccc
Confidence 35689999999999775 8999999999999999999998742 1122222211 122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEe--cCCCcHHHH-hccCEEeccCCchHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSM--GIQGTEVAK-ESSDIVIMDDNFSSVVTV 711 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam--~~~~~~~a~-~~ad~vl~~~~~~~i~~~ 711 (941)
.|+-...+++.++-..+.+++|||+.||..+-++||+ .|++ |....+... ..+|+++. ++..+...
T Consensus 139 ~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~--~l~el~~~ 208 (210)
T d2ah5a1 139 KADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLAY 208 (210)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHHH
T ss_pred cccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHHH
Confidence 3333334444444446789999999999999999998 4555 322233333 44899986 56666544
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.01 E-value=0.0011 Score=65.43 Aligned_cols=126 Identities=14% Similarity=0.157 Sum_probs=85.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.|++.++++.|+ +|+++.++|+........+.+.+|+... .+.++.+.+.. ..+-
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~------fd~i~~s~~~~----------------~~KP 156 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDL------FDSITTSEEAG----------------FFKP 156 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGG------CSEEEEHHHHT----------------BCTT
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccc------ccccccccccc----------------ccch
Confidence 45789999999997 5899999999999999999999998642 11222221111 1112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCC-ccCHHHHHhCCccE-EecC-CCcHHHHhccCEEeccCCchHHHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDG-TNDAPALRAADIGL-SMGI-QGTEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg-~ND~~~l~~A~vgI-am~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
.|+-=..+++.+.-....+++|||. .+|+.+-+.||+-. .+.. .........+|+++. ++..+.++|++
T Consensus 157 ~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~~ 228 (230)
T d1x42a1 157 HPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVS--DLREVIKIVDE 228 (230)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEES--STTHHHHHHHH
T ss_pred hhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEEC--CHHHHHHHHHH
Confidence 2333344455554456689999998 58999999998842 3321 233345567899987 78888888764
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.65 E-value=0.00064 Score=65.73 Aligned_cols=117 Identities=15% Similarity=0.176 Sum_probs=77.8
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.|++.++++.|++.|+++.++|+... .+..+.+.+|+... ...++.+.+.. ...-.
T Consensus 83 ~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~------f~~i~~s~~~~----------------~~Kp~ 139 (204)
T d2go7a1 83 LMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESY------FTEILTSQSGF----------------VRKPS 139 (204)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGG------EEEEECGGGCC----------------CCTTS
T ss_pred ccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccc------ccccccccccc----------------ccchh
Confidence 569999999999999999999998765 55678889998641 12222222111 11224
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCcHHHHhccCEEeccCCchHHHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGTEVAKESSDIVIMDDNFSSVVTV 711 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~~a~~~ad~vl~~~~~~~i~~~ 711 (941)
|+--..+++.+.-..+.|+||||+.+|..+-+.||+. |++. .+.. .+|..+. ++..+..+
T Consensus 140 ~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~~----~~~~~~~--~~~dl~~l 200 (204)
T d2go7a1 140 PEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-ESTY----EGNHRIQ--ALADISRI 200 (204)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCSC----TTEEECS--STTHHHHH
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEc-CCCC----CcCeecC--CHHHHHHH
Confidence 4455556666665567999999999999999999984 5555 3322 2455443 44555443
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.38 E-value=0.0088 Score=53.29 Aligned_cols=107 Identities=17% Similarity=0.319 Sum_probs=67.9
Q ss_pred cCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeE
Q 047874 425 TGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTI 504 (941)
Q Consensus 425 ~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~ 504 (941)
+.||+.+|++++|+.+.+..... .........+|....+..++.+ ++. .+..|++..+....... |.
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~---~g~---~v~~G~~~~~~~~~~~~----g~- 95 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRERD--VQSLHATFVPFTAQSRMSGINI---DNR---MIRKGSVDAIRRHVEAN----GG- 95 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCCC--TTTTTCEEEEEETTTTEEEEEE---TTE---EEEEECHHHHHHHHHHH----TC-
T ss_pred CCchHHHHHHHHHHHhcCCCccc--cccccccccccccccceEEEEE---CCE---EEEecHHHHHHHHHHHc----CC-
Confidence 56999999999998443332211 1122234456666655544433 333 34569998775543210 00
Q ss_pred eeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEeccCCCC
Q 047874 505 RILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGLKDPCR 566 (941)
Q Consensus 505 ~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~ 566 (941)
.+ ...+.+..+++..+|..++.++. |-+++|++++.|++|
T Consensus 96 -~~----~~~~~~~~~~~~~~G~Tvv~Va~-----------------d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 96 -HF----PTDVDQKVDQVARQGATPLVVVE-----------------GSRVLGVIALKDIVK 135 (136)
T ss_dssp -CC----CHHHHHHHHHHHHTTSEEEEEEE-----------------TTEEEEEEEEEESSC
T ss_pred -CC----cHHHHHHHHHHHHCCCeEEEEEE-----------------CCEEEEEEEEEeecC
Confidence 01 24566778889999999998885 458999999999986
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.37 E-value=0.0037 Score=61.77 Aligned_cols=117 Identities=15% Similarity=0.059 Sum_probs=80.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
.+.|++.+.+++|+++|+++.++|+..........+.+|+..-.. ..+...... ...+-
T Consensus 127 ~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~----------------~~~KP 185 (253)
T d1zs9a1 127 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILE-----LVDGHFDTK----------------IGHKV 185 (253)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGG-----GCSEEECGG----------------GCCTT
T ss_pred ccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhh-----hcceeeccc----------------cccCC
Confidence 467999999999999999999999999999999999998754210 000000000 01233
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEE-e---cCCCcHHHHhccCEEec
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS-M---GIQGTEVAKESSDIVIM 701 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa-m---~~~~~~~a~~~ad~vl~ 701 (941)
.|+-=....+.+.-..+.++||||..+|+.+-++||+-.. + |..........++.++.
T Consensus 186 ~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 186 ESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred CcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 4444455666666567789999999999999999999544 3 32222334455666665
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.33 E-value=0.00054 Score=66.47 Aligned_cols=119 Identities=13% Similarity=0.184 Sum_probs=80.6
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.|++.+.++.|++ ++++.++|+.....+..+.+++|+... ...+..+.... ...-.
T Consensus 83 ~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~------f~~i~~~~~~~----------------~~KP~ 139 (207)
T d2hdoa1 83 LYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMR------MAVTISADDTP----------------KRKPD 139 (207)
T ss_dssp ECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGG------EEEEECGGGSS----------------CCTTS
T ss_pred cccchhhhhhhhcc-ccccccccccccccccccccccccccc------ccccccccccc----------------cchhh
Confidence 45899999999975 799999999999999999999998642 12222222111 01123
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEe---cCCCcHHHHhccCEEeccCCchHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSM---GIQGTEVAKESSDIVIMDDNFSSVV 709 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam---~~~~~~~a~~~ad~vl~~~~~~~i~ 709 (941)
|+--..+++.++-..+.+++|||+.+|..+-+.||+.... | .......+.+|+++. ++..+.
T Consensus 140 p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~--~l~dll 204 (207)
T d2hdoa1 140 PLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQ--KPLDIL 204 (207)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEES--SGGGGG
T ss_pred hhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeC--CHHHHH
Confidence 4444555555554457899999999999999999987543 3 233344566788875 455443
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.33 E-value=0.0019 Score=59.97 Aligned_cols=93 Identities=8% Similarity=-0.016 Sum_probs=66.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCH-HHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEe
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNV-HTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMAR 642 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~-~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 642 (941)
++.|++.++++.|+++|+++.++|+.+. ..+..+-+..++..... .+...
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~-----------------------------~~~~~ 96 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI-----------------------------QREIY 96 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS-----------------------------EEEES
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce-----------------------------eeecc
Confidence 4679999999999999999999997654 55666777777653110 02222
Q ss_pred cCH--HHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEec
Q 047874 643 SSP--LDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMG 685 (941)
Q Consensus 643 ~~p--~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~ 685 (941)
..| +.-..+.+.+.-..+.+++|||..+|+.+-+.||+ .|.+.
T Consensus 97 ~kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~ 142 (164)
T d1u7pa_ 97 PGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIR 142 (164)
T ss_dssp SSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECS
T ss_pred cCCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 223 33344555555557789999999999999999988 34443
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.13 E-value=0.013 Score=52.84 Aligned_cols=98 Identities=13% Similarity=0.009 Sum_probs=60.6
Q ss_pred cCCCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhh--cCceE
Q 047874 562 KDPCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKI--ESIRV 639 (941)
Q Consensus 562 ~d~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~v 639 (941)
++++.+++.+.++.|+++|++++++||++......+.+.++.. ........ .....
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~----------------------~~~~~~~~~~~~~~~ 91 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMT----------------------RKWVEDIAGVPLVMQ 91 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHH----------------------HHHHHHTTCCCCSEE
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHH----------------------hhhhhhcCCCcEEEe
Confidence 5788999999999999999999999999743211111111000 00000000 00011
Q ss_pred EE------ecCHHHHHHHHHHHHhCCC-EEEEEcCCccCHHHHHhCCcc
Q 047874 640 MA------RSSPLDKLLMVQSLKQKGH-VVAVTGDGTNDAPALRAADIG 681 (941)
Q Consensus 640 ~~------~~~p~~K~~iv~~l~~~g~-~v~~iGDg~ND~~~l~~A~vg 681 (941)
+. |-.+.-|..+.+.+...++ .++++||...|+.|.+.+|+=
T Consensus 92 ~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 92 CQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp EECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ecccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 21 1224567777777765544 567899999999999999884
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.05 E-value=0.0058 Score=58.02 Aligned_cols=145 Identities=21% Similarity=0.300 Sum_probs=93.4
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC---CCccccee-cch---------hcccCCHHHHH
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVD---LNKDEAVI-EGV---------QFRSLSAEERI 631 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~---~~~~~~~~-~g~---------~~~~~~~~~~~ 631 (941)
+-||+.++++.+++. ...+++|-.-.+-..++|+.+|+... .+ ++-+..-+ .+. .+.+.+.+++.
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e-~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~ 159 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGE-LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELF 159 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSE-EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCce-eecccccccccCCChHHHHHHHHHhhhccCccHHHHH
Confidence 458999999999987 67777777778889999999999632 11 01010000 000 01111112221
Q ss_pred -------------HhhcCceEEEecCHHHHHHHHHHHHhC--CCEEEEEcCCccCHHHHHhCCc--cEEecCCCcHHHHh
Q 047874 632 -------------AKIESIRVMARSSPLDKLLMVQSLKQK--GHVVAVTGDGTNDAPALRAADI--GLSMGIQGTEVAKE 694 (941)
Q Consensus 632 -------------~~~~~~~v~~~~~p~~K~~iv~~l~~~--g~~v~~iGDg~ND~~~l~~A~v--gIam~~~~~~~a~~ 694 (941)
+.+++++.. -...|..+++...+. -...+++||+..|..||+.|.= |+|+.-||.+-+..
T Consensus 160 e~~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~ 236 (308)
T d1y8aa1 160 RKLDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALK 236 (308)
T ss_dssp HHHHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHT
T ss_pred HHHHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCcccccc
Confidence 222333322 225677776655432 2345899999999999998732 66666689999999
Q ss_pred ccCEEeccCCchHHHHHHHH
Q 047874 695 SSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 695 ~ad~vl~~~~~~~i~~~i~~ 714 (941)
.||+++.+.+-..+..++..
T Consensus 237 eA~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 237 HADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp TCSEEEECSSTHHHHHHHHH
T ss_pred ccceEEeccchhHHHHHHHH
Confidence 99999999888877766643
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.99 E-value=0.0053 Score=60.85 Aligned_cols=125 Identities=14% Similarity=0.128 Sum_probs=83.0
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.|++.++++.|++ |+++.++|+.+........+.+|+... .+.++.+.+.. .+.-+
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~------fd~i~~s~~~~----------------~~KP~ 166 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY------FDAIVIGGEQK----------------EEKPA 166 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG------CSEEEEGGGSS----------------SCTTC
T ss_pred cCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccc------ccccccccccc----------------cchhh
Confidence 57999999999984 899999999999999999999998642 11222222211 01112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHHHhCCcc-EEec-CCC--cHHHHhccCEEeccCCchHHHHHHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGT-NDAPALRAADIG-LSMG-IQG--TEVAKESSDIVIMDDNFSSVVTVLRW 714 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~vg-Iam~-~~~--~~~a~~~ad~vl~~~~~~~i~~~i~~ 714 (941)
|+-=..+.+.+.-..+.+++|||.. +|+.+-+.||+. +..- ..+ .......+|+++. ++..+..+|+.
T Consensus 167 p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~~ll~~ 239 (247)
T d2gfha1 167 PSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALLQS 239 (247)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHHHH
T ss_pred hhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEEC--CHHHHHHHHHH
Confidence 3322344455544456899999995 899999999996 4432 111 1122345788887 68888877754
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.98 E-value=0.0023 Score=64.05 Aligned_cols=36 Identities=17% Similarity=0.233 Sum_probs=30.0
Q ss_pred CcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc
Q 047874 566 RPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIEC 601 (941)
Q Consensus 566 ~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~ 601 (941)
=+++.++|++|+++|++++++|++...+...+++++
T Consensus 20 i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 20 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 378899999999999999999988766666666554
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.95 E-value=0.006 Score=57.66 Aligned_cols=108 Identities=19% Similarity=0.096 Sum_probs=71.3
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++.+++.+.++.|++.|+++.++|+.+.... ...+.+|+... -+.++.+.+... ..-
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~------fd~i~~~~~~~~----------------~KP 135 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAY------FTEVVTSSSGFK----------------RKP 135 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGG------EEEEECGGGCCC----------------CTT
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccc------cccccccccccc----------------cCC
Confidence 4568999999999999999999999876554 56788887641 122333322110 111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEEecCCCcHHHHhccC
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLSMGIQGTEVAKESSD 697 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad 697 (941)
.|+--..+.+.+. .+.+++|||..+|..+-++||+-...- ++....++.-|
T Consensus 136 ~p~~~~~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i~v-~~~~~~~~~~d 186 (187)
T d2fi1a1 136 NPESMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 186 (187)
T ss_dssp SCHHHHHHHHHTT--CSSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred CHHHHHHHHHHcC--CCCeEEEeCCHHHHHHHHHcCCEEEEE-CCCCChHhhcC
Confidence 2333334444433 345899999999999999999864332 56666666655
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=95.48 E-value=0.0042 Score=59.01 Aligned_cols=89 Identities=19% Similarity=0.264 Sum_probs=63.5
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCH----HHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEE
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNV----HTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 640 (941)
+.+++.+.++.+++.|++|+.+|||.. .|++.+.+.+|+...+. ... ++
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~----~~v-----------------------ll 139 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNM----NPV-----------------------IF 139 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTB----CCC-----------------------EE
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccc----cce-----------------------Ee
Confidence 457999999999999999999999964 46677777789865321 111 22
Q ss_pred Eec--CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEe
Q 047874 641 ARS--SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSM 684 (941)
Q Consensus 641 ~~~--~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam 684 (941)
.+- ....|.+.++ + -..++++||..+|..+-+.|++ +|-+
T Consensus 140 ~~~~~~K~~rr~~Ik---~-y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 140 AGDKPGQNTKSQWLQ---D-KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp CCCCTTCCCSHHHHH---H-TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred eCCCCCchHHHHHHH---H-cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 221 1234555554 3 3589999999999999989986 5654
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=95.39 E-value=0.011 Score=56.83 Aligned_cols=110 Identities=18% Similarity=0.106 Sum_probs=58.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCC--------HHH-------HHHHHHHcCCCCCCCCCCcccceecchhcccCCHH
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDN--------VHT-------ARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAE 628 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~--------~~~-------a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~ 628 (941)
.+-|++.++|++|+++|+++.++|..+ ... .....++.|+...............+.....
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~---- 123 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIP---- 123 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCS----
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEeccccccccccccc----
Confidence 356899999999999999999999632 111 1222233343211000000000000000000
Q ss_pred HHHHhhcCceEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEec
Q 047874 629 ERIAKIESIRVMARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMG 685 (941)
Q Consensus 629 ~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~ 685 (941)
+ ..+..-+|.--.++.+.+.-..+.+.||||..+|..+=+.|++ +|.+.
T Consensus 124 -------~-~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~ 173 (209)
T d2o2xa1 124 -------D-HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV 173 (209)
T ss_dssp -------S-CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred -------c-cccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEe
Confidence 0 0000112333344455554445689999999999999999999 46554
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=94.96 E-value=0.0083 Score=59.68 Aligned_cols=44 Identities=14% Similarity=0.231 Sum_probs=33.5
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEcC---CCHHHHHHHHHHcCCCCC
Q 047874 563 DPCRPGVRAAVESCRNAGVNVKMVTG---DNVHTARAIAIECGILNP 606 (941)
Q Consensus 563 d~~~~~~~~~I~~l~~aGi~v~i~TG---d~~~~a~~ia~~~gi~~~ 606 (941)
+.+=+++.++|+.|+++|++++++|+ +........-+++|+..+
T Consensus 18 ~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~ 64 (250)
T d2c4na1 18 NVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP 64 (250)
T ss_dssp TEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCC
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccccc
Confidence 33347899999999999999999984 555666555667888653
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=94.96 E-value=0.013 Score=56.64 Aligned_cols=122 Identities=11% Similarity=0.117 Sum_probs=84.2
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEecC
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARSS 644 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 644 (941)
+.+++.++++.+++.|+++.++|+-.........+..++... ...++...+.. ..+-+
T Consensus 94 ~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~------fd~~~~s~~~~----------------~~KP~ 151 (220)
T d1zrna_ 94 PFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDG------FDHLLSVDPVQ----------------VYKPD 151 (220)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG------CSEEEESGGGT----------------CCTTS
T ss_pred ccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccccc------ccceeeeeeee----------------ccccH
Confidence 458899999999999999999999999999999998887642 11222222211 11223
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCccEE-ec--CCCcHHHHhccCEEeccCCchHHHH
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIGLS-MG--IQGTEVAKESSDIVIMDDNFSSVVT 710 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa-m~--~~~~~~a~~~ad~vl~~~~~~~i~~ 710 (941)
|+-=..+++.+.-..+.+++|||..+|+.+-++||+-.. +. ....+.....+|+++. ++..+.+
T Consensus 152 p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~--~l~el~~ 218 (220)
T d1zrna_ 152 NRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVE 218 (220)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHT
T ss_pred HHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEEC--CHHHHHh
Confidence 444455566665566789999999999999999998644 42 1223333455798885 5666654
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=94.95 E-value=0.024 Score=56.45 Aligned_cols=61 Identities=18% Similarity=0.250 Sum_probs=41.9
Q ss_pred HHHHHHHHhCCCEEEEEcCCc-cCHHHHHhCCc-cEEecCCC---cHHHHh---ccCEEeccCCchHHHHHH
Q 047874 649 LLMVQSLKQKGHVVAVTGDGT-NDAPALRAADI-GLSMGIQG---TEVAKE---SSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 649 ~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~v-gIam~~~~---~~~a~~---~ad~vl~~~~~~~i~~~i 712 (941)
..+.+.+.-..+.++||||+. +|+.+-+.||+ +|.+. .| .+.... .+|+++. ++..+.++|
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~-~G~~~~~~~~~~~~~PD~ii~--~l~eL~~~l 260 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVL-TGETTPEDLERAETKPDFVFK--NLGELAKAV 260 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEES-SSSCCHHHHHHCSSCCSEEES--SHHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEEC-CCCCCHHHHhhcCCCCCEEEC--CHHHHHHHh
Confidence 344444444567899999995 69999999998 66664 22 222222 2499987 778887766
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=94.26 E-value=0.011 Score=57.16 Aligned_cols=111 Identities=7% Similarity=0.126 Sum_probs=73.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++-+++.+.++.|++.|+++.++|+... +....+..|+... ...++.+.+.. ..+-
T Consensus 91 ~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~------f~~i~~~~~~~----------------~~KP 146 (221)
T d1o08a_ 91 DVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGY------FDAIADPAEVA----------------ASKP 146 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGG------CSEECCTTTSS----------------SCTT
T ss_pred cccCCceeccccccccccceEEEeecch--hhHHHHhhccccc------ccccccccccc----------------cccc
Confidence 4568999999999999999999999765 5678888888642 12223222211 1112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEecCCCcHHHHhccCEEec
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMGIQGTEVAKESSDIVIM 701 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~~~~~~~a~~~ad~vl~ 701 (941)
.|+-=....+.+.-..+.++||||+.+|+.+-+.||+ +|+++ .+ .....++.++.
T Consensus 147 ~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~-~~--~~~~~~~~~~~ 202 (221)
T d1o08a_ 147 APDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVG-RP--EDLGDDIVIVP 202 (221)
T ss_dssp STHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEES-CH--HHHCSSSEEES
T ss_pred ChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEEC-Ch--hhcccccEEcC
Confidence 2333334444444456789999999999999999997 56665 32 23334555554
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=94.24 E-value=0.04 Score=54.53 Aligned_cols=56 Identities=25% Similarity=0.208 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCcc-CHHHHHhCCc-cEEecCCC---cHHHHhc---cCEEec
Q 047874 645 PLDKLLMVQSLKQKGHVVAVTGDGTN-DAPALRAADI-GLSMGIQG---TEVAKES---SDIVIM 701 (941)
Q Consensus 645 p~~K~~iv~~l~~~g~~v~~iGDg~N-D~~~l~~A~v-gIam~~~~---~~~a~~~---ad~vl~ 701 (941)
|+--..+.+.++-..+.++||||..+ |..+-++||+ +|.+. .| .+...+. .|+++.
T Consensus 183 p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~-~G~~~~~~~~~~~~~PD~vi~ 246 (253)
T d1wvia_ 183 AVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVT-TGFTKPEEVPALPIQPDFVLS 246 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEES-SSSSCTTTGGGCSSCCSEEES
T ss_pred cccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEEC-CCCCCHHHHhhcCCCCCEEEC
Confidence 44444555666555678999999976 9999999999 77774 22 2222222 388876
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.59 E-value=0.057 Score=51.87 Aligned_cols=124 Identities=13% Similarity=0.151 Sum_probs=78.2
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
.+.+++.+.+++++. +..++|+.....+..+.+.+|+...- ...+..+..... -.+.-
T Consensus 85 ~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~~~--------------~~~KP 142 (222)
T d2fdra1 85 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYF-----APHIYSAKDLGA--------------DRVKP 142 (222)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGT-----TTCEEEHHHHCT--------------TCCTT
T ss_pred chhhhHHHHhhhccc---cceeeeecchhhhhhhhccccccccc-----ceeecccccccc--------------ccccc
Confidence 356888888877764 55789999999999999999997521 111222111100 00111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCc-------H-HHHhccCEEeccCCchHHHHHH
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGT-------E-VAKESSDIVIMDDNFSSVVTVL 712 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~-------~-~a~~~ad~vl~~~~~~~i~~~i 712 (941)
.|+-=....+.+.-..+.+++|||+.+|+.+=+.||+- |++. .+. + ....-+|+++. ++..+..+|
T Consensus 143 ~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi~--~l~eL~~ll 217 (222)
T d2fdra1 143 KPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS--RMQDLPAVI 217 (222)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHH
T ss_pred CHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEc-cCCCCCcchHHHHHhCCCCEEEC--CHHHHHHHH
Confidence 23333445555554567899999999999999999973 5554 222 1 12234899997 666666555
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.26 E-value=0.037 Score=53.15 Aligned_cols=104 Identities=15% Similarity=0.183 Sum_probs=68.5
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCC----CHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEE
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGD----NVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 640 (941)
+.+++.+.++.|+++|+++.++|+. ............|+... .+.++.+.... .
T Consensus 98 ~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~------fd~i~~s~~~~----------------~ 155 (222)
T d1cr6a1 98 INRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQH------FDFLIESCQVG----------------M 155 (222)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGG------CSEEEEHHHHS----------------C
T ss_pred CCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhh------hceeeehhhcc----------------C
Confidence 5689999999999999999999963 23344444555555431 11222222111 1
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEecCCCcHH
Q 047874 641 ARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMGIQGTEV 691 (941)
Q Consensus 641 ~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~~~~~~~ 691 (941)
..-.|+--...++.++-..+.++||||..+|+.+-++||+ +|.+. ++.+.
T Consensus 156 ~KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~~ 206 (222)
T d1cr6a1 156 IKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVH-NTASA 206 (222)
T ss_dssp CTTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECC-SSSHH
T ss_pred CCCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEEC-CcchH
Confidence 1224555566667776667889999999999999999998 56664 44443
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=92.68 E-value=0.019 Score=52.63 Aligned_cols=27 Identities=26% Similarity=0.461 Sum_probs=23.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCC
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDN 590 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~ 590 (941)
.+-|++.++++.|+++|++++++|..+
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~ 56 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQD 56 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECT
T ss_pred eECccHHHHHHHHHHcCCceeeecccc
Confidence 346899999999999999999999753
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=92.37 E-value=0.26 Score=47.64 Aligned_cols=124 Identities=14% Similarity=0.149 Sum_probs=82.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 564 PCRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 564 ~~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
++-+++.+++++|+ |+++.++|..+...+....+..|+... ...++.+.+... .+-
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~------fd~v~~s~~~~~----------------~KP 148 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS------FDAVISVDAKRV----------------FKP 148 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG------CSEEEEGGGGTC----------------CTT
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccc------cccccccccccc----------------cCc
Confidence 45688999999885 788999999999999998898887642 123333332211 122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCcc-EEecCCCcH-------------------------HHHhccC
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADIG-LSMGIQGTE-------------------------VAKESSD 697 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~-------------------------~a~~~ad 697 (941)
.|+-=..+++.+.-..+.|++|||+.+|+.+=+.||+- |.+...+.+ ......|
T Consensus 149 ~p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd 228 (245)
T d1qq5a_ 149 HPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPD 228 (245)
T ss_dssp SHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCS
T ss_pred cHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCC
Confidence 33333455555655567899999999999999999873 434211110 0112478
Q ss_pred EEeccCCchHHHHHHH
Q 047874 698 IVIMDDNFSSVVTVLR 713 (941)
Q Consensus 698 ~vl~~~~~~~i~~~i~ 713 (941)
+++. ++..+..+|+
T Consensus 229 ~~i~--~l~el~~lv~ 242 (245)
T d1qq5a_ 229 FVVP--ALGDLPRLVR 242 (245)
T ss_dssp EEES--SGGGHHHHHH
T ss_pred EEEC--CHHHHHHHHH
Confidence 9886 8888887765
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.91 E-value=0.087 Score=50.18 Aligned_cols=99 Identities=15% Similarity=0.164 Sum_probs=61.4
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHH----HHHHHcCCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEE
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTAR----AIAIECGILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVM 640 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~----~ia~~~gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 640 (941)
+.+++.+.++.|++.|++++++|+....... ..-...++... .+.++.+.+.. .
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~------fd~i~~s~~~~----------------~ 157 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH------FDFLIESCQVG----------------M 157 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT------SSEEEEHHHHT----------------C
T ss_pred CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhh------ccEEEeccccc----------------c
Confidence 5789999999999999999999975433222 22222233211 01122211110 0
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEec
Q 047874 641 ARSSPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMG 685 (941)
Q Consensus 641 ~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~ 685 (941)
..-+|+-=..+++.+.-..+.+++|||...|+.+-++||+ +|.+.
T Consensus 158 ~KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 158 VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred chhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 1123344345555555555789999999999999999999 66665
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=83.51 E-value=0.061 Score=49.95 Aligned_cols=99 Identities=14% Similarity=0.113 Sum_probs=58.9
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHHHHHHHHHHc-CCCCCCCCCCcccceecchhcccCCHHHHHHhhcCceEEEec
Q 047874 565 CRPGVRAAVESCRNAGVNVKMVTGDNVHTARAIAIEC-GILNPDVDLNKDEAVIEGVQFRSLSAEERIAKIESIRVMARS 643 (941)
Q Consensus 565 ~~~~~~~~I~~l~~aGi~v~i~TGd~~~~a~~ia~~~-gi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 643 (941)
+.+++.+.++.++..|+++.++|+-+...+...-.+. |+... ...++.+... -...-
T Consensus 85 ~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~------fd~v~~s~~~----------------~~~Kp 142 (197)
T d2b0ca1 85 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA------ADHIYLSQDL----------------GMRKP 142 (197)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH------CSEEEEHHHH----------------TCCTT
T ss_pred cCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhh------ccceeecccc----------------ccccc
Confidence 5688999999999999999999986544332211111 11100 0001111000 00112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHHHhCCc-cEEec
Q 047874 644 SPLDKLLMVQSLKQKGHVVAVTGDGTNDAPALRAADI-GLSMG 685 (941)
Q Consensus 644 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~ 685 (941)
.|+-=..+.+.+.-..+.+++|||..+|..+-+.||+ +|.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~ 185 (197)
T d2b0ca1 143 EARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVK 185 (197)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred chHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEEC
Confidence 3333334445554456789999999999999999998 67765
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=80.29 E-value=14 Score=30.25 Aligned_cols=87 Identities=16% Similarity=0.363 Sum_probs=53.8
Q ss_pred cCCccHHHHHHHHHHhcCCCCcCcccccceeEEeCCCCCCCcEEEEEEecCCceEEEEecCcHHHHHhhcccccccCCeE
Q 047874 425 TGSPTEKAILSWAMIDLGMNVDEPKQYCTVINVEAFNSEKKRSGVLMKRINEKVFHTHWKGAAEMILVMCSHYYVKSGTI 504 (941)
Q Consensus 425 ~~~p~e~al~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~c~~~~~~~g~~ 504 (941)
+.||..+|++++++ +.+.+...... .... +.+ ++-. ..+.+ |+++.+.+....
T Consensus 26 S~HPlA~AIv~~a~-~~~~~~~~~~~----~~~~---~G~---Gi~g-----~~v~v---G~~~~~~~~~~~-------- 78 (113)
T d2b8ea2 26 SEHPIAEAIVKKAL-EHGIELGEPEK----VEVI---AGE---GVVA-----DGILV---GNKRLMEDFGVA-------- 78 (113)
T ss_dssp CCSHHHHHHHHHHH-TTTCCCCCCSC----EEEE---TTT---EEEE-----TTEEE---ECHHHHHHTTCC--------
T ss_pred CCCchHHHHHHHHH-HhcCCCCcccc----ceee---ccc---eEEe-----EEEEE---CcHHHHHhcCCC--------
Confidence 67999999999998 55554433221 1111 111 2211 12333 999988654321
Q ss_pred eeCCHHHHHHHHHHHHHHHhcccceeeeeeeccccccccchhhhhccCcEEEEEEec
Q 047874 505 RILDGEERTQIEKIIQEMAAKSLRCIAFAHTKAAEADGQVQEKLEETGLTLLGLVGL 561 (941)
Q Consensus 505 ~~l~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~~~~~~~~~~~~~e~~l~~lG~i~~ 561 (941)
++ +.+.+..+++..+|..++.++. |-.++|++++
T Consensus 79 --~~----~~~~~~~~~~~~~G~T~v~va~-----------------d~~~~G~ial 112 (113)
T d2b8ea2 79 --VS----NEVELALEKLEREAKTAVIVAR-----------------NGRVEGIIAV 112 (113)
T ss_dssp --CC----HHHHHHHHHHHTTTCEEEEEEE-----------------TTEEEEEEEE
T ss_pred --CC----HHHHHHHHHHHhCCCeEEEEEE-----------------CCEEEEEEEE
Confidence 12 3466778888999998888886 4468898876
|