Citrus Sinensis ID: 048070

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-------
Protein Sequence
IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASPFGIMIIVGNLLVQNYDK
Secondary Structure (PSIPRED)
cEEccccccccccccccHHHHHHHHHHcccccEEEEEcccccccccccccccccccccHHEEEEEEEccccEEEEEEccEEEEcccc
Secondary Structure Prediction (SSPRO)
cccccccHcccccccccHHHHHHHHHccccccEEEEEcccccccccccccccccccHHHEEEEEEEccccccEEEEEcHHHHHcccc
Coil and Loop (DISEMBL)
ivlapltrvrsynniprphsiLYYSQRTINGGFLIaeatgvsdtaqglsiTRNSFLNARLWYLYWVFASPFGIMIIVGNLLVQNYDK
Flexible Loop (DISEMBL)
ivlapltrvrsynniprphsILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASPFGIMIIVGNLLVQNYDK
Low Complexity Region (SEG)
IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASPFGIMIIVGNLLVQNYDK
Disordered region (IsUnstruct)
******TRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASPFGIMIIVGNLLVQN***
Disordered Region (DISOPRED)
IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASPFGIMIIVGN********
Disordered Region (DISEMBL)
IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASPFGIMIIVGNLLVQNYDK
Disordered Region (DISPRO)
IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASPFGIMIIVGNLLVQNYDK
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASPFGIMIIVGNLLVQNYDK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	87	2.2.26 [Sep-21-2011]
Q8GYB8	374	12-oxophytodienoate reduc	yes	no	0.540	0.125	0.787	3e-16
Q8LAH7	372	12-oxophytodienoate reduc	no	no	0.586	0.137	0.725	6e-16
B9FSC8	367	Putative 12-oxophytodieno	yes	no	0.586	0.138	0.725	8e-16
Q69TH8	380	Putative 12-oxophytodieno	yes	no	0.540	0.123	0.723	1e-15
Q69TI0	374	Putative 12-oxophytodieno	yes	no	0.540	0.125	0.659	2e-14
Q69TH6	382	Putative 12-oxophytodieno	no	no	0.540	0.123	0.680	4e-14
B9FFD2	406	Putative 12-oxophytodieno	no	no	0.574	0.123	0.66	4e-14
Q0E0C6	406	Putative 12-oxophytodieno	no	no	0.540	0.115	0.723	1e-13
Q69TI2	391	Putative 12-oxophytodieno	no	no	0.540	0.120	0.659	1e-13
Q84QK0	380	12-oxophytodienoate reduc	no	no	0.540	0.123	0.680	1e-13

>sp|Q8GYB8|OPR2_ARATH 12-oxophytodienoate reductase 2 OS=Arabidopsis thaliana GN=OPR2 PE=2 SV=2

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/47 (78%), Positives = 43/47 (91%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          +VLAPLTR +SY ++P+PH+ILYYSQRT  GGFLIAEATGVSDTAQG
Sbjct: 29 VVLAPLTRQKSYGSVPQPHAILYYSQRTSPGGFLIAEATGVSDTAQG 75

Specifically cleaves olefinic bonds in alpha,beta-unsaturated carbonyls and may be involved in detoxification or modification of these reactive compounds. May be involved in the biosynthesis or metabolism of oxylipin signaling molecules. In vitro, reduces 9R,13R-12-oxophyodienoic acid (9R,13R-OPDA) to 9R,13R-OPC-8:0, but only poorly 9S,13S-OPDA, the natural precursor of jasmonic acid. Can detoxify the explosive 2,4,6-trinitrotoluene (TNT) in vitro and in vivo by catalyzing its nitroreduction to form hydroxylamino-dinitrotoluene (HADNT).
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 4EC: 2

>sp|Q8LAH7|OPR1_ARATH 12-oxophytodienoate reductase 1 OS=Arabidopsis thaliana GN=OPR1 PE=1 SV=2

 Score = 82.8 bits (203), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/51 (72%), Positives = 42/51 (82%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSIT 51
          +VLAPLTR RSY N+P+PH+ +YYSQRT  GGFLI EATGVSDTAQG   T
Sbjct: 27 VVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFLITEATGVSDTAQGYQDT 77

Specifically cleaves olefinic bonds in alpha,beta-unsaturated carbonyls and may be involved in detoxification or modification of these reactive compounds. May be involved in the biosynthesis or metabolism of oxylipin signaling molecules. In vitro, reduces 9R,13R-12-oxophyodienoic acid (9R,13R-OPDA) to 9R,13R-OPC-8:0, but only poorly 9S,13S-OPDA, the natural precursor of jasmonic acid. Can detoxify the explosive 2,4,6-trinitrotoluene (TNT) in vitro and in vivo by catalyzing its nitroreduction to form hydroxylamino-dinitrotoluene (HADNT).

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 2

>sp|B9FSC8|OPR11_ORYSJ Putative 12-oxophytodienoate reductase 11 OS=Oryza sativa subsp. japonica GN=OPR11 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 37/51 (72%), Positives = 42/51 (82%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSIT 51
          +VLAPLTR RSY N+P+PH+ILYY QRT  GG LIAEATG+SDTAQG   T
Sbjct: 22 VVLAPLTRQRSYGNVPQPHAILYYQQRTTKGGLLIAEATGISDTAQGYKDT 72

Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q69TH8|OPR4_ORYSJ Putative 12-oxophytodienoate reductase 4 OS=Oryza sativa subsp. japonica GN=OPR4 PE=2 SV=1

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/47 (72%), Positives = 41/47 (87%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          +VLAPLTR RSY N+PRPH++LYY+QR  +GG L+ EATGVSDTAQG
Sbjct: 32 VVLAPLTRNRSYGNVPRPHAVLYYTQRATSGGLLVTEATGVSDTAQG 78

Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q69TI0|OPR5_ORYSJ Putative 12-oxophytodienoate reductase 5 OS=Oryza sativa subsp. japonica GN=OPR5 PE=2 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/47 (65%), Positives = 40/47 (85%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          ++L+P+TR RSY N+P+PH+ LYY+QR  +GG LI EATGVSDTAQG
Sbjct: 26 VLLSPMTRCRSYGNVPQPHAALYYTQRATSGGLLITEATGVSDTAQG 72

Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q69TH6|OPR3_ORYSJ Putative 12-oxophytodienoate reductase 3 OS=Oryza sativa subsp. japonica GN=OPR3 PE=3 SV=1

 Score = 77.0 bits (188), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/47 (68%), Positives = 40/47 (85%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          +VLAPLTR RSY+++P+PH+ LYYSQR  NGG LI+EATGVS T +G
Sbjct: 33 VVLAPLTRCRSYDHVPQPHAALYYSQRATNGGLLISEATGVSATGEG 79

Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|B9FFD2|OPR12_ORYSJ Putative 12-oxophytodienoate reductase 12 OS=Oryza sativa subsp. japonica GN=OPR12 PE=2 SV=2

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/50 (66%), Positives = 41/50 (82%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSI 50
          +VLAPLTR RSY+N+P+ H++ YYSQR   GG LIAEATGVS  AQG+S+
Sbjct: 37 VVLAPLTRSRSYDNLPQSHAMEYYSQRATKGGLLIAEATGVSSDAQGMSV 86

Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q0E0C6|OPR8_ORYSJ Putative 12-oxophytodienoate reductase 8 OS=Oryza sativa subsp. japonica GN=OPR8 PE=2 SV=1

 Score = 75.5 bits (184), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/47 (72%), Positives = 38/47 (80%)

Query: 1   IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
           +V APLTR R YNN+P+ H  LYYSQR  NGG LIAEATGVS+TAQG
Sbjct: 63  VVHAPLTRSRCYNNLPQEHVQLYYSQRATNGGLLIAEATGVSETAQG 109

Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q69TI2|OPR6_ORYSJ Putative 12-oxophytodienoate reductase 6 OS=Oryza sativa subsp. japonica GN=OPR6 PE=2 SV=1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/47 (65%), Positives = 38/47 (80%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          ++LAP+TR RSY N+P+PH+ LYY+QR   GG LI EATGVS TAQG
Sbjct: 38 VLLAPMTRCRSYGNVPQPHAALYYTQRATRGGLLITEATGVSATAQG 84

Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q84QK0|OPR1_ORYSJ 12-oxophytodienoate reductase 1 OS=Oryza sativa subsp. japonica GN=OPR1 PE=2 SV=1

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/47 (68%), Positives = 38/47 (80%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          +VLAPLTR RSY N+P+PH+ +YYSQR   GG LIAEAT +S TAQG
Sbjct: 31 VVLAPLTRCRSYGNVPQPHAAVYYSQRATRGGLLIAEATDISPTAQG 77

Probably involved in the biosynthesis or metabolism of oxylipin signaling molecules. In vitro, reduces cis(-)-12-oxophytodienoic acid (cis(-)-OPDA) and to cis(-)-OPC-8:0.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	87
224135727	370	predicted protein [Populus trichocarpa]	0.540	0.127	0.851	6e-16
356570696	365	PREDICTED: 12-oxophytodienoate reductase	0.551	0.131	0.791	6e-16
283132371	356	12-oxophytodienoate reductase [Lotus jap	0.586	0.143	0.784	2e-15
255570925	360	12-oxophytodienoate reductase opr, putat	0.540	0.130	0.808	2e-15
224120074	311	predicted protein [Populus trichocarpa]	0.586	0.163	0.764	2e-15
356497438	371	PREDICTED: 12-oxophytodienoate reductase	0.540	0.126	0.808	2e-15
40645351	362	hypothetical protein [Pisum sativum]	0.586	0.140	0.764	3e-15
225460240	379	PREDICTED: 12-oxophytodienoate reductase	0.540	0.124	0.808	3e-15
147778557	379	hypothetical protein VITISV_033920 [Viti	0.540	0.124	0.808	3e-15
44917016	116	12-oxophytodienoic acid 10, 11-reductase	0.586	0.439	0.764	3e-15

>gi|224135727|ref|XP_002327289.1| predicted protein [Populus trichocarpa] gi|222835659|gb|EEE74094.1| predicted protein [Populus trichocarpa]

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/47 (85%), Positives = 43/47 (91%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          IVLAPLTR RSYNN+P+PH+ILYYSQRT  GG LIAEATGVSDTAQG
Sbjct: 25 IVLAPLTRQRSYNNVPQPHAILYYSQRTTEGGLLIAEATGVSDTAQG 71

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356570696|ref|XP_003553521.1| PREDICTED: 12-oxophytodienoate reductase 2-like [Glycine max]

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/48 (79%), Positives = 45/48 (93%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGL 48
          +VLAPLTR+RSYNN+P+PH++LYYSQRT  GG LI+EATGVSDTAQGL
Sbjct: 27 VVLAPLTRMRSYNNVPQPHAVLYYSQRTSPGGLLISEATGVSDTAQGL 74

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|283132371|dbj|BAI63591.1| 12-oxophytodienoate reductase [Lotus japonicus]

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/51 (78%), Positives = 43/51 (84%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSIT 51
          IVLAPLTR RSYNN+P+PH+ILYYSQR   GG LIAEATGVSDTAQG   T
Sbjct: 23 IVLAPLTRQRSYNNVPQPHAILYYSQRASQGGLLIAEATGVSDTAQGYQYT 73

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255570925|ref|XP_002526414.1| 12-oxophytodienoate reductase opr, putative [Ricinus communis] gi|223534276|gb|EEF35990.1| 12-oxophytodienoate reductase opr, putative [Ricinus communis]

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/47 (80%), Positives = 42/47 (89%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          +VLAPLTR RSYNN+P+PH+ILYYSQRT  GG LI EATGVSDTAQG
Sbjct: 15 VVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLITEATGVSDTAQG 61

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120074|ref|XP_002331130.1| predicted protein [Populus trichocarpa] gi|222872858|gb|EEF09989.1| predicted protein [Populus trichocarpa]

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/51 (76%), Positives = 45/51 (88%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSIT 51
          +V+APLTR RSYNN+P+PH+ILYYSQR  NGGFLI+EATGVSDTAQG   T
Sbjct: 25 VVMAPLTRDRSYNNMPQPHAILYYSQRATNGGFLISEATGVSDTAQGYPET 75

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497438|ref|XP_003517567.1| PREDICTED: 12-oxophytodienoate reductase 2-like [Glycine max]

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/47 (80%), Positives = 43/47 (91%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          +VLAPLTR RSY+N+P+PH+ILYYSQRT NGG LI EATGVSDTAQG
Sbjct: 20 VVLAPLTRQRSYDNVPQPHAILYYSQRTSNGGLLITEATGVSDTAQG 66

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|40645351|dbj|BAD06521.1| hypothetical protein [Pisum sativum]

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 39/51 (76%), Positives = 44/51 (86%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSIT 51
          +V+APLTR RSYNN+P+PH+ILYYSQR   GG LIAEATGVSDTAQGL  T
Sbjct: 26 VVMAPLTRTRSYNNVPQPHAILYYSQRASQGGLLIAEATGVSDTAQGLPDT 76

Source: Pisum sativum

Species: Pisum sativum

Genus: Pisum

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225460240|ref|XP_002281119.1| PREDICTED: 12-oxophytodienoate reductase 2 [Vitis vinifera]

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/47 (80%), Positives = 43/47 (91%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          +VLAPLTR RS+NN+P+PH+ILYYSQRT  GG LIAEATGVSDTAQG
Sbjct: 34 VVLAPLTRQRSWNNVPQPHAILYYSQRTSKGGLLIAEATGVSDTAQG 80

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147778557|emb|CAN60665.1| hypothetical protein VITISV_033920 [Vitis vinifera]

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/47 (80%), Positives = 43/47 (91%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          +VLAPLTR RS+NN+P+PH+ILYYSQRT  GG LIAEATGVSDTAQG
Sbjct: 34 VVLAPLTRQRSWNNVPQPHAILYYSQRTSKGGLLIAEATGVSDTAQG 80

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|44917016|dbj|BAD12187.1| 12-oxophytodienoic acid 10, 11-reductase [Pisum sativum]

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 39/51 (76%), Positives = 44/51 (86%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSIT 51
          +V+APLTR RSYNN+P+PH+ILYYSQR   GG LIAEATGVSDTAQGL  T
Sbjct: 26 VVMAPLTRTRSYNNVPQPHAILYYSQRASQGGLLIAEATGVSDTAQGLPDT 76

Source: Pisum sativum

Species: Pisum sativum

Genus: Pisum

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	87
TAIR|locus:2030096	374	OPR2 "12-oxophytodienoate redu	0.540	0.125	0.787	4.1e-15
TAIR|locus:2030086	397	OPR1 "12-oxophytodienoate redu	0.586	0.128	0.725	6.3e-15
UNIPROTKB|Q84QK0	380	OPR1 "12-oxophytodienoate redu	0.540	0.123	0.680	1.2e-12
TAIR|locus:2012285	324	AT1G09400 [Arabidopsis thalian	0.517	0.138	0.688	9.3e-12
TAIR|locus:2030948	269	AT1G17990 [Arabidopsis thalian	0.540	0.174	0.617	3.1e-10
TAIR|locus:1005716725	269	AT1G18020 [Arabidopsis thalian	0.540	0.174	0.617	3.1e-10
UNIPROTKB|Q9KKV7	367	VCA0993 "N-ethylmaleimide redu	0.574	0.136	0.509	4.1e-07
TIGR_CMR|VC_A0993	367	VC_A0993 "N-ethylmaleimide red	0.574	0.136	0.509	4.1e-07
TAIR|locus:2051516	391	OPR3 "oxophytodienoate-reducta	0.540	0.120	0.510	2.1e-06
UNIPROTKB|C5H429	387	DBR2 "Artemisinic aldehyde Del	0.540	0.121	0.489	3.3e-06

TAIR|locus:2030096 OPR2 "12-oxophytodienoate reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 4.1e-15, P = 4.1e-15
 Identities = 37/47 (78%), Positives = 43/47 (91%)

Query:     1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
             +VLAPLTR +SY ++P+PH+ILYYSQRT  GGFLIAEATGVSDTAQG
Sbjct:    29 VVLAPLTRQKSYGSVPQPHAILYYSQRTSPGGFLIAEATGVSDTAQG 75

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010181 "FMN binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009611 "response to wounding" evidence=IEP

GO:0009695 "jasmonic acid biosynthetic process" evidence=TAS

GO:0016629 "12-oxophytodienoate reductase activity" evidence=ISS

TAIR|locus:2030086 OPR1 "12-oxophytodienoate reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 6.3e-15, P = 6.3e-15
 Identities = 37/51 (72%), Positives = 42/51 (82%)

Query:     1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSIT 51
             +VLAPLTR RSY N+P+PH+ +YYSQRT  GGFLI EATGVSDTAQG   T
Sbjct:    27 VVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFLITEATGVSDTAQGYQDT 77

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010150 "leaf senescence" evidence=TAS

GO:0010181 "FMN binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009611 "response to wounding" evidence=IEP

GO:0009695 "jasmonic acid biosynthetic process" evidence=TAS

GO:0006629 "lipid metabolic process" evidence=TAS

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0016629 "12-oxophytodienoate reductase activity" evidence=ISS;IDA

GO:0005829 "cytosol" evidence=IDA

GO:0031407 "oxylipin metabolic process" evidence=IDA

UNIPROTKB|Q84QK0 OPR1 "12-oxophytodienoate reductase 1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 174 (66.3 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 32/47 (68%), Positives = 38/47 (80%)

Query:     1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
             +VLAPLTR RSY N+P+PH+ +YYSQR   GG LIAEAT +S TAQG
Sbjct:    31 VVLAPLTRCRSYGNVPQPHAAVYYSQRATRGGLLIAEATDISPTAQG 77

GO:0006950 "response to stress" evidence=TAS

GO:0006952 "defense response" evidence=TAS

GO:0009695 "jasmonic acid biosynthetic process" evidence=IEP

GO:0016629 "12-oxophytodienoate reductase activity" evidence=IDA

GO:0031408 "oxylipin biosynthetic process" evidence=IDA

TAIR|locus:2012285 AT1G09400 [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 9.3e-12, P = 9.3e-12
 Identities = 31/45 (68%), Positives = 37/45 (82%)

Query:     1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTA 45
             IV+AP+ R+RSY NIP+PH  LYY QRT  GG LI+EATGVS+TA
Sbjct:    10 IVMAPMARMRSYGNIPQPHVALYYCQRTTPGGLLISEATGVSETA 54

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010181 "FMN binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2030948 AT1G17990 [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 3.1e-10, P = 3.1e-10
 Identities = 29/47 (61%), Positives = 38/47 (80%)

Query:     1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
             +VLAPLTR RSY NIP+P++ LYY+QRT  GG LI+E+  VS+T+ G
Sbjct:    24 VVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLISESCVVSETSLG 70

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010181 "FMN binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:1005716725 AT1G18020 [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 3.1e-10, P = 3.1e-10
 Identities = 29/47 (61%), Positives = 38/47 (80%)

Query:     1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
             +VLAPLTR RSY NIP+P++ LYY+QRT  GG LI+E+  VS+T+ G
Sbjct:    24 VVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLISESCVVSETSLG 70

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010181 "FMN binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|Q9KKV7 VCA0993 "N-ethylmaleimide reductase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 123 (48.4 bits), Expect = 4.1e-07, P = 4.1e-07
 Identities = 27/53 (50%), Positives = 34/53 (64%)

Query:     1 IVLAPLTRVRSYN--NIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSIT 51
             +V+AP+TR RS    NIP P    YY QR  + G +I+EAT +SD AQG S T
Sbjct:    19 VVMAPMTRARSSQPGNIPNPMMATYYQQRA-SAGLIISEATQISDDAQGYSFT 70

GO:0008152 "metabolic process" evidence=ISS

GO:0008748 "N-ethylmaleimide reductase activity" evidence=ISS

TIGR_CMR|VC_A0993 VC_A0993 "N-ethylmaleimide reductase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 123 (48.4 bits), Expect = 4.1e-07, P = 4.1e-07
 Identities = 27/53 (50%), Positives = 34/53 (64%)

Query:     1 IVLAPLTRVRSYN--NIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSIT 51
             +V+AP+TR RS    NIP P    YY QR  + G +I+EAT +SD AQG S T
Sbjct:    19 VVMAPMTRARSSQPGNIPNPMMATYYQQRA-SAGLIISEATQISDDAQGYSFT 70

GO:0008152 "metabolic process" evidence=ISS

GO:0008748 "N-ethylmaleimide reductase activity" evidence=ISS

TAIR|locus:2051516 OPR3 "oxophytodienoate-reductase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 24/47 (51%), Positives = 31/47 (65%)

Query:     1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
             +VLAP+TR R+ N +P      YY+QRT  GGFLI+E T VS  + G
Sbjct:    27 VVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSPGSAG 73

GO:0003824 "catalytic activity" evidence=IEA

GO:0010181 "FMN binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA;IMP

GO:0016629 "12-oxophytodienoate reductase activity" evidence=IDA;IMP

GO:0009611 "response to wounding" evidence=IGI;RCA

GO:0010193 "response to ozone" evidence=IEP

GO:0005777 "peroxisome" evidence=IDA

GO:0009620 "response to fungus" evidence=IEP;RCA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0009694 "jasmonic acid metabolic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

UNIPROTKB|C5H429 DBR2 "Artemisinic aldehyde Delta(11(13)) reductase" [Artemisia annua (taxid:35608)]

 Score = 115 (45.5 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 23/47 (48%), Positives = 31/47 (65%)

Query:     1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
             +VLAP+TR R+ N IP    + YY QR+  GGFLI E T +S ++ G
Sbjct:    22 VVLAPMTRCRAINAIPNEALVEYYRQRSTAGGFLITEGTMISPSSAG 68

GO:0005829 "cytosol" evidence=IDA

GO:0016628 "oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q69TH8	OPR4_ORYSJ	1, ., 3, ., 1, ., -	0.7234	0.5402	0.1236	yes	no
B9FSC8	OPR11_ORYSJ	1, ., 3, ., 1, ., -	0.7254	0.5862	0.1389	yes	no
Q8GYB8	OPR2_ARATH	1, ., 3, ., 1, ., 4, 2	0.7872	0.5402	0.1256	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pm.C_scaffold_41000063	hypothetical protein (370 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.VIII.1137.1	allene-oxide cyclase family protein (EC-5.3.99.6) (173 aa)						•	•		0.901
	ACLL20	acyl-coa ligase (554 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	87
cd02933	338	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-lik	1e-12
PLN02411	391	PLN02411, PLN02411, 12-oxophytodienoate reductase	2e-12
PRK10605	362	PRK10605, PRK10605, N-ethylmaleimide reductase; Pr	2e-07
cd04747	361	cd04747, OYE_like_5_FMN, Old yellow enzyme (OYE)-r	2e-05
COG1902	363	COG1902, NemA, NADH:flavin oxidoreductases, Old Ye	0.002

>gnl|CDD|239243 cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 2/48 (4%)

Query: 1  IVLAPLTRVRS-YNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          IV+APLTR R+  + +P      YY+QR  + G +I EAT +S   QG
Sbjct: 17 IVMAPLTRSRADPDGVPTDLMAEYYAQRA-SAGLIITEATQISPQGQG 63

OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include 12-oxophytodienoate reductase, pentaerythritol tetranitrate reductase, morphinone reductase, and related enzymes. Length = 338

>gnl|CDD|178033 PLN02411, PLN02411, 12-oxophytodienoate reductase

 Score = 60.3 bits (146), Expect = 2e-12
 Identities = 25/47 (53%), Positives = 32/47 (68%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          +VLAP+TR R+ N IP      YY+QR+  GGFLI+E T +S TA G
Sbjct: 27 VVLAPMTRCRALNGIPNAALAEYYAQRSTPGGFLISEGTLISPTAPG 73

Length = 391

>gnl|CDD|182584 PRK10605, PRK10605, N-ethylmaleimide reductase; Provisional

 Score = 46.3 bits (110), Expect = 2e-07
 Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 3/49 (6%)

Query: 1  IVLAPLTRVRSYN--NIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          + +APLTR+RS    +IP P    YY QR  + G +I+EAT +S  A+G
Sbjct: 18 VFMAPLTRLRSIEPGDIPTPLMAEYYRQRA-SAGLIISEATQISAQAKG 65

Length = 362

>gnl|CDD|240095 cd04747, OYE_like_5_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 5

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTING-GFLIAEATGVSDTAQG 47
          IV+AP+TR  S   +P      YY +R   G G +I E T V   A  
Sbjct: 16 IVMAPMTRSFSPGGVPGQDVAAYYRRRAAGGVGLIITEGTAVDHPAAS 63

Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase. Length = 361

>gnl|CDD|224814 COG1902, NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]

 Score = 34.9 bits (81), Expect = 0.002
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query: 1  IVLAPLTRVRS-YNNIPRPHSILYYSQRTING-GFLIAEATGVSDTAQG 47
          IV+AP+TR R+  + +P      YY++R   G G +I EAT V    +G
Sbjct: 21 IVMAPMTRNRATPDGLPTDLLAEYYAERAKGGAGLIITEATAVDPGGRG 69

Length = 363

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	87
PLN02411	391	12-oxophytodienoate reductase	99.71
cd02803	327	OYE_like_FMN_family Old yellow enzyme (OYE)-like F	99.69
COG1902	363	NemA NADH:flavin oxidoreductases, Old Yellow Enzym	99.68
cd04734	343	OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN	99.65
cd02932	336	OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN	99.65
cd04733	338	OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN	99.65
cd04735	353	OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN	99.65
PF00724	341	Oxidored_FMN: NADH:flavin oxidoreductase / NADH ox	99.62
cd02933	338	OYE_like_FMN Old yellow enzyme (OYE)-like FMN bind	99.61
cd02930	353	DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-bindin	99.6
PRK13523	337	NADPH dehydrogenase NamA; Provisional	99.59
cd04747	361	OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN	99.56
PRK08255	765	salicylyl-CoA 5-hydroxylase; Reviewed	99.56
PRK10605	362	N-ethylmaleimide reductase; Provisional	99.55
cd02931	382	ER_like_FMN Enoate reductase (ER)-like FMN-binding	99.42
cd02929	370	TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH)	99.41
KOG0134	400	consensus NADH:flavin oxidoreductase/12-oxophytodi	96.04
KOG0134	400	consensus NADH:flavin oxidoreductase/12-oxophytodi	94.18

>PLN02411 12-oxophytodienoate reductase

Probab=99.71  E-value=2.5e-17  Score=125.90  Aligned_cols=68  Identities=38%  Similarity=0.562  Sum_probs=64.3

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      ||||||+++++.||.+|+++++||++||+|+||||+|++.|++.+..+++++++|+|+++++||+|..
T Consensus        27 iv~aPm~~~~~~dG~~t~~~~~yy~~rA~gGGLIIte~~~V~~~g~~~~~~~gi~~d~~i~~~~~l~~   94 (391)
T PLN02411         27 VVLAPMTRCRALNGIPNAALAEYYAQRSTPGGFLISEGTLISPTAPGFPHVPGIYSDEQVEAWKKVVD   94 (391)
T ss_pred             CEECCcCcCcCCCCCCCHHHHHHHHHHHcCCCEEEeCceEECcccCcCCCCCccCCHHHHHHHHHHHH
Confidence            79999999887789999999999999999669999999999999999999999999999999999975

>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain

Probab=99.69  E-value=6.3e-17  Score=119.25  Aligned_cols=68  Identities=25%  Similarity=0.324  Sum_probs=64.2

Q ss_pred             CEEccCCCCcC-CCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRS-YNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~-~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+|+||++.++ +||.+|+++++||++||+| +||||+|++.|++.+..+++++++|+|+++++||++..
T Consensus        15 ~~~~p~~~~~~~~~g~~~~~~~~~y~~ra~gg~glii~e~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (327)
T cd02803          15 IVMAPMTENMATEDGTPTDELIEYYEERAKGGVGLIITEAAYVDPEGKGYPGQLGIYDDEQIPGLRKLTE   84 (327)
T ss_pred             cEecccccccccCCCCCCHHHHHHHHHHhCcCCcEEEECcEEEcCcccCCCCCcCcCCHHHHHHHHHHHH
Confidence            68999999888 5999999999999999995 89999999999999999999999999999999999865

OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.

>COG1902 NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]

Probab=99.68  E-value=7.3e-17  Score=122.80  Aligned_cols=68  Identities=29%  Similarity=0.438  Sum_probs=64.3

Q ss_pred             CEEccCCCCcCC-CCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSY-NNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~-dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      ||||||++++++ ||.+||.+++||++||+| +||||+|.+.|++.++.+++++++|+|+|+++||+|-.
T Consensus        21 ivmaPm~~~~a~~dG~pt~~~~~yy~~RA~gG~Glii~~~~~v~~~g~~~~~~~~l~~d~~i~~~~~vt~   90 (363)
T COG1902          21 IVMAPMTRNRATPDGLPTDLLAEYYAERAKGGAGLIITEATAVDPGGRGYPGQPGLWSDAQIPGLKRLTE   90 (363)
T ss_pred             eeecCcccccccCCCCCCHHHHHHHHHHhcCCCCEEEEeeEeeCcccccCCCCCccCChhHhHHHHHHHH
Confidence            699999999884 899999999999999996 89999999999999999999999999999999999864

>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3

Probab=99.65  E-value=2.3e-16  Score=118.59  Aligned_cols=68  Identities=16%  Similarity=0.140  Sum_probs=63.9

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+||||++++++||.+|+++++||++||+| +||||+|.+.|++.+..+++++++|+|+++++||+|..
T Consensus        16 iv~apm~~~~~~~G~~t~~~~~~y~~~A~gG~GlIi~e~~~v~~~~~~~~~~~~l~~d~~i~~~~~l~~   84 (343)
T cd04734          16 IVSTAHATNYAEDGLPSERYIAYHEERARGGAGLIITEGSSVHPSDSPAFGNLNASDDEIIPGFRRLAE   84 (343)
T ss_pred             eEECCcccccccCCCCCHHHHHHHHHHHhCCCCEEEEeeeeeCCcccCCCCccccCCHHHHHHHHHHHH
Confidence            689999988778899999999999999995 89999999999999999999999999999999999864

Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase. One member of this subgroup, the Sinorhizobium meliloti stachydrine utilization protein stcD, has been idenified as a putative N-methylproline demethylase.

>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain

Probab=99.65  E-value=2.8e-16  Score=117.26  Aligned_cols=68  Identities=19%  Similarity=0.310  Sum_probs=64.1

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+|+||+++.++||.+|+++++||++||+| +||||+|++.|++.+..+++++++|+|+++++||+|..
T Consensus        16 i~~~pm~~~~~~~g~~~~~~~~~y~~rA~gg~glii~~~~~v~~~~~~~~~~~~~~~d~~~~~~~~l~~   84 (336)
T cd02932          16 IVVSPMCQYSAEDGVATDWHLVHYGSRALGGAGLVIVEATAVSPEGRITPGDLGLWNDEQIEALKRIVD   84 (336)
T ss_pred             CEEcccccCcCCCCCCCHHHHHHHHHHHcCCCcEEEEcceEECCCcCCCCCceeecCHHHHHHHHHHHH
Confidence            689999987777999999999999999996 89999999999999999999999999999999999976

YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.

>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2

Probab=99.65  E-value=2.5e-16  Score=117.67  Aligned_cols=68  Identities=15%  Similarity=0.025  Sum_probs=63.5

Q ss_pred             CEEccCCCCcC-CCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCC---CCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRS-YNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLS---ITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~-~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~---~~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+|+||+++++ .||.+||++++||++||+| +||||+|++.|++.+..++   +++++|+|+++++||+|-.
T Consensus        17 i~~~p~~~~~~~~~g~~~~~~~~~y~~rA~gG~glii~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~~~l~~   89 (338)
T cd04733          17 LAKAAMSERLADGRGLPTPELIRLYRRWAEGGIGLIITGNVMVDPRHLEEPGIIGNVVLESGEDLEAFREWAA   89 (338)
T ss_pred             ceecccccccccCCCCCCHHHHHHHHHHhCCCceEEEEeeEEECcccccCCCcCCCcccCCHHHHHHHHHHHH
Confidence            68999999887 6999999999999999996 8999999999999998888   8999999999999999965

Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.

>cd04735 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 4

Probab=99.65  E-value=2.5e-16  Score=118.60  Aligned_cols=68  Identities=24%  Similarity=0.217  Sum_probs=64.2

Q ss_pred             CEEccCCCCcC-CCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRS-YNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~-~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+|+||++.++ +||.+|+++++||++||+|+||||+|++.|++.+..+++++++|+|+++++||+|..
T Consensus        17 iv~apm~~~~~~~~G~~t~~~~~yy~~rA~g~glIi~e~~~v~~~~~~~~~~~~~~~d~~i~~~~~l~~   85 (353)
T cd04735          17 FVMAPMTTYSSNPDGTITDDELAYYQRRAGGVGMVITGATYVSPSGIGFEGGFSADDDSDIPGLRKLAQ   85 (353)
T ss_pred             ceecccccCccCCCCCCCHHHHHHHHHHhCCCCEEEECceEECcccCcCCCCceecChhhhHHHHHHHH
Confidence            69999999887 599999999999999999999999999999999888899999999999999999865

Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.

>PF00724 Oxidored_FMN: NADH:flavin oxidoreductase / NADH oxidase family; InterPro: IPR001155 The TIM-barrel fold is a closed barrel structure composed of an eight-fold repeat of beta-alpha units, where the eight parallel beta strands on the inside are covered by the eight alpha helices on the outside []

Probab=99.62  E-value=4.6e-16  Score=116.62  Aligned_cols=68  Identities=26%  Similarity=0.323  Sum_probs=57.9

Q ss_pred             CEEccCCCCcC-CCCCCC-HHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRS-YNNIPR-PHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~-~dG~~t-~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      ||||||+++++ ++|.++ +++++||++||+| +||||+|++.|++.+..+++++++|+|+++++||+|..
T Consensus        17 iv~apm~~~~~~~~g~~~~~~~~~yy~~rA~GG~Glii~~~~~v~~~~~~~~~~~~i~~d~~i~~~k~l~~   87 (341)
T PF00724_consen   17 IVMAPMTTNMADPDGGVPTDRLIAYYERRAKGGAGLIITEATAVSPEGRGFPGQPGIWDDEQIPGLKKLAD   87 (341)
T ss_dssp             EEE----SSTSCTTTTBCHHHHHHHHHHHHHTTTSEEEEEEEESSGGGSSSTTSEBSSSHHHHHHHHHHHH
T ss_pred             eEECCCCCCCcccCCCCcHHHHHHHHHHHhhcCCceEEecccccccccccccccchhchhhHHHHHHHHHH
Confidence            68999999887 577554 5999999999995 89999999999999999999999999999999999864

It is a widely distributed fold which has been found in many enzyme families that catalyse completely unrelated reactions []. The active site is always found at the C-terminal end of this domain. Proteins in this entry are a variety of NADH:flavin oxidoreductase/NADH oxidase enzymes, found mostly in bacteria or fungi, that contain a TIM-barrel fold. They commonly use FMN/FAD as cofactor and include: dimethylamine dehydrogenase trimethylamine dehydrogenase 12-oxophytodienoate reductase NADPH dehydrogenase NADH oxidase ; GO: 0010181 FMN binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GKA_B 3P67_A 3F03_K 2ABA_A 1VYR_A 1GVO_A 3KFT_B 3P8I_A 1GVQ_A 3P74_A ....

>cd02933 OYE_like_FMN Old yellow enzyme (OYE)-like FMN binding domain

Probab=99.61  E-value=1.8e-15  Score=113.74  Aligned_cols=67  Identities=34%  Similarity=0.461  Sum_probs=63.2

Q ss_pred             CEEccCCCCcC-CCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRS-YNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~-~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+|+||++..+ +||.+|+++++||++||+| ||||+|++.|++.++..++++++|+|+++++||+|..
T Consensus        17 iv~apm~~~~~~~~G~~t~~~~~~y~~rA~g-glIi~~~~~v~~~g~~~~~~~~l~~d~~i~~lr~la~   84 (338)
T cd02933          17 IVMAPLTRSRADPDGVPTDLMAEYYAQRASA-GLIITEATQISPQGQGYPNTPGIYTDEQVEGWKKVTD   84 (338)
T ss_pred             cEECCCCccccCCCCCCCHHHHHHHHHHhcC-ceEEeCceeeCccccCCCCCCccCCHHHHHHHHHHHH
Confidence            69999998877 5999999999999999999 9999999999999999999999999999999999965

OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include 12-oxophytodienoate reductase, pentaerythritol tetranitrate reductase, morphinone reductase, and related enzymes.

>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain

Probab=99.60  E-value=2e-15  Score=113.46  Aligned_cols=68  Identities=4%  Similarity=-0.064  Sum_probs=62.8

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+||||++..+.+|.+|+++++||++||+| +||||+|.+.|++.+..+++++++|+|+++++||+|..
T Consensus        16 iv~~p~~~~~~~~~~~~~~~~~~y~~rA~gG~glii~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~l~~   84 (353)
T cd02930          16 VLMGSMHTGLEELDDGIDRLAAFYAERARGGVGLIVTGGFAPNEAGKLGPGGPVLNSPRQAAGHRLITD   84 (353)
T ss_pred             cEeCCccccccCCCCCCHHHHHHHHHHhcCCceEEEEeeEEeCCcccCCCCCcccCCHHHHHHHHHHHH
Confidence            689999976666788999999999999995 89999999999999999999999999999999999865

DCR in E. coli is an iron-sulfur flavoenzyme which contains FMN, FAD, and a 4Fe-4S cluster. It is also a monomer, unlike that of its eukaryotic counterparts which form homotetramers and lack the flavin and iron-sulfur cofactors. Metabolism of unsaturated fatty acids requires auxiliary enzymes in addition to those used in b-oxidation. After a given number of cycles through the b-oxidation pathway, those unsaturated fatty acyl-CoAs with double bonds at even-numbered carbon positions contain 2-trans, 4-cis double bonds that can not be modified by enoyl-CoA hydratase. DCR utilizes NADPH to remove the C4-C5 double bond. DCR can catalyze the reduction of both natural fatty acids with cis double bonds, as well as substrates containing trans double bonds. The reaction is initiated by hybrid transfer from NADPH to FAD, which in turn transfers electrons, one at a time, to FMN via the 4Fe-4S cluster. The fully reduced FMN provi

>PRK13523 NADPH dehydrogenase NamA; Provisional

Probab=99.59  E-value=3.4e-15  Score=112.36  Aligned_cols=68  Identities=19%  Similarity=0.201  Sum_probs=63.0

Q ss_pred             CEEccCCCCcC--CCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRS--YNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~--~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+|+||++..+  +||.+|+++++||++||+| +||||+|++.|++.+..+++++++|+|+++|+||+|..
T Consensus        18 iv~apm~~~~~~~~~G~~t~~~~~~y~~rA~gG~GlIi~~~~~v~~~~~~~~~~~~~~~d~~i~~~r~l~d   88 (337)
T PRK13523         18 IVMSPMCMYSSENKDGKVTNFHLIHYGTRAAGQVGLVIVEATAVLPEGRISDKDLGIWDDEHIEGLHKLVT   88 (337)
T ss_pred             cEecccccccccCCCCCCCHHHHHHHHHHHcCCCeEEEECCeEECccccCCCCceecCCHHHHHHHHHHHH
Confidence            68999998765  4899999999999999996 89999999999999998999999999999999999865

>cd04747 OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 5

Probab=99.56  E-value=7.3e-15  Score=111.63  Aligned_cols=68  Identities=28%  Similarity=0.298  Sum_probs=60.3

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCC-CCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQG-LSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~-~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+|+||++..+.||.+|+++++||++||+| +||||+|++.|++.+.. +++++++|+|+++|+||++..
T Consensus        16 iv~spm~~~~~~~G~~t~~~~~yy~~rA~GG~GlIite~~~V~~~~~~~~~~~~~~~~d~~i~~~~~l~d   85 (361)
T cd04747          16 IVMAPMTRSFSPGGVPGQDVAAYYRRRAAGGVGLIITEGTAVDHPAASGDPNVPRFHGEDALAGWKKVVD   85 (361)
T ss_pred             eEEcCcccCcCCCCCCCHHHHHHHHHHhcCCccEEEecceEeccccccCCCCCCccCCHHHHHHHHHHHH
Confidence            689999988778999999999999999996 89999999999865443 478889999999999999864

Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.

>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed

Probab=99.56  E-value=6e-15  Score=120.02  Aligned_cols=68  Identities=13%  Similarity=0.231  Sum_probs=63.7

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+|+||+++++.||.+|+++++||++||+| +||||+|++.|++.+..+++++++|+|+++++||++..
T Consensus       414 i~~~pm~~~~~~~g~~t~~~~~~y~~rA~gG~glii~e~~~v~~~g~~~~~~~~~~~d~~i~~~~~~~~  482 (765)
T PRK08255        414 VVVSPMAMYSAVDGVPGDFHLVHLGARALGGAGLVMTEMTCVSPEGRITPGCPGLYNDEQEAAWKRIVD  482 (765)
T ss_pred             ccccCcccccCCCCCCCHHHHHHHHHHHcCCCcEEEECCeEECCCcCCCCCCCccCCHHHHHHHHHHHH
Confidence            689999987777999999999999999995 89999999999999999999999999999999999865

>PRK10605 N-ethylmaleimide reductase; Provisional

Probab=99.55  E-value=1.1e-14  Score=110.31  Aligned_cols=67  Identities=34%  Similarity=0.492  Sum_probs=61.3

Q ss_pred             CEEccCCCCcC--CCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRS--YNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~--~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+||||+++++  ++|.+|+++++||++|| |+||||+|++.|++.+..+++++++|+|+++++||+|-.
T Consensus        18 iv~apm~~~~~~~~~g~~t~~~~~~y~~rA-g~GLIi~e~~~v~~~~~~~~~~~~l~~d~~i~~~~~lad   86 (362)
T PRK10605         18 VFMAPLTRLRSIEPGDIPTPLMAEYYRQRA-SAGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKITA   86 (362)
T ss_pred             cEECCcCcCccCCCCCCCCHHHHHHHHHHh-CCCEEEECceeeCcccccCCCCCcccCHHHHHHHHHHHH
Confidence            68999998654  47799999999999999 699999999999999999999999999999999999854

>cd02931 ER_like_FMN Enoate reductase (ER)-like FMN-binding domain

Probab=99.42  E-value=4e-13  Score=102.36  Aligned_cols=68  Identities=16%  Similarity=0.150  Sum_probs=56.4

Q ss_pred             CEEccCCC-CcC-CCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCC--CC--CccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTR-VRS-YNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGL--SI--TRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~-~~~-~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~--~~--~~~i~~d~~i~~Lk~~~~   68 (87)
                      ||||||++ ..+ +||.+|+++++||++||+| +||||+|++.|++.+...  +.  ++.+++|+++++||+|..
T Consensus        16 iv~apm~~~~~~~~dg~~t~~~~~yy~~rA~gG~GlIi~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~k~l~d   90 (382)
T cd02931          16 FAMAPMGPLGLADNDGAFNQRGIDYYVERAKGGTGLIITGVTMVDNEIEQFPMPSLPCPTYNPTAFIRTAKEMTE   90 (382)
T ss_pred             cEeCCcCcccccCCCCCCCHHHHHHHHHHhcCCCCEEEEEEEEeCCcccccCCCCccccccCCHHHhHHHHHHHH
Confidence            68999987 444 6999999999999999995 899999999999875432  22  446778889999999865

Enoate reductase catalyzes the NADH-dependent reduction of carbon-carbon double bonds of several molecules, including nonactivated 2-enoates, alpha,beta-unsaturated aldehydes, cyclic ketones, and methylketones. ERs are similar to 2,4-dienoyl-CoA reductase from E. coli and to the old yellow enzyme from Saccharomyces cerevisiae.

>cd02929 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) and histamine dehydrogenase (HD) FMN-binding domain

Probab=99.41  E-value=5e-13  Score=101.48  Aligned_cols=66  Identities=8%  Similarity=0.047  Sum_probs=55.6

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCC-CccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSI-TRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~-~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+||||++..+.++  .+.+++||++||+| +||||+|++.|++.+..+++ ++++|+|+++++||+|..
T Consensus        23 iv~apm~~~~~~~~--~~~~~~y~~~rA~gG~GLIi~e~~~V~~~~~~~~~~~~~l~~d~~i~~~~~l~~   90 (370)
T cd02929          23 FYQVPHCNGMGYRK--PSAQAAMRGIKAEGGWGVVNTEQCSIHPSSDDTPRISARLWDDGDIRNLAAMTD   90 (370)
T ss_pred             eEECCcccCcCCCC--hHHHHHHHHHHhCCCceEEEEeeeEEccccccCcccCcCcCCHHHHHHHHHHHH
Confidence            68999988654321  33466899999996 89999999999999888877 799999999999999865

TMADH is an iron-sulfur flavoprotein that catalyzes the oxidative demethylation of trimethylamine to form dimethylamine and formaldehyde. The protein forms a symetrical dimer with each subunit containing one 4Fe-4S cluster and one FMN cofactor. It contains a unique flavin, in the form of a 6-S-cysteinyl FMN which is bent by ~25 degrees along the N5-N10 axis of the flavin isoalloxazine ring. This modification of the conformation of the flavin is thought to facilitate catalysis.The closely related histamine dehydrogenase catalyzes oxidative deamination of histamine.

>KOG0134 consensus NADH:flavin oxidoreductase/12-oxophytodienoate reductase [Energy production and conversion; General function prediction only]

Probab=96.04  E-value=0.0013  Score=51.21  Aligned_cols=64  Identities=27%  Similarity=0.214  Sum_probs=38.7

Q ss_pred             CEEccCCCCcC-CCC--CCCHHHHHHHHHhcc-CCcEEEecccccCCCCCCCCCCccCCCHHHHhhHH
Q 048070            1 IVLAPLTRVRS-YNN--IPRPHSILYYSQRTI-NGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLY   64 (87)
Q Consensus         1 IVmAPM~~~~~-~dG--~~t~~~i~yY~~RAk-GaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk   64 (87)
                      ++++|+++++. +.+  ........||.+|.. ..++||++.+.+.+.+.+....+++|.|++.++++
T Consensus        24 ~~~g~~trnR~lk~~~~e~~~~~~~y~~qr~g~Pt~~iI~~~~~~g~g~~G~i~t~nv~vdp~~~~~~   91 (400)
T KOG0134|consen   24 FVNGPETRNRFLKAALTEIQSNAAEYYPQRHGLPTDFLINEYTKWGNGSFGYINTPNVWVDPQNEEWA   91 (400)
T ss_pred             ccccHHHhhhhhcccccccccccCcCchhhcCCCCceEEEeeccccCCCCceecCCceeecccccccC
Confidence            35677777765 222  335666677777766 45666666666666655666666666666555543

>KOG0134 consensus NADH:flavin oxidoreductase/12-oxophytodienoate reductase [Energy production and conversion; General function prediction only]

Probab=94.18  E-value=0.01  Score=46.39  Aligned_cols=68  Identities=9%  Similarity=0.044  Sum_probs=57.6

Q ss_pred             EccCCCCcCC-CCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhcC
Q 048070            3 LAPLTRVRSY-NNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASP   70 (87)
Q Consensus         3 mAPM~~~~~~-dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~~   70 (87)
                      ++++..++.. .|.||+.+|.-|..-+-| .|++.++.+.|+|....+++...++.+.+-..+++++.-+
T Consensus        43 ~~~~~~y~~qr~g~Pt~~iI~~~~~~g~g~~G~i~t~nv~vdp~~~~~~~~~~~~~e~~~~~~~ql~~~~  112 (400)
T KOG0134|consen   43 QSNAAEYYPQRHGLPTDFLINEYTKWGNGSFGYINTPNVWVDPQNEEWAGNVIAFHENDSFEFRQLWHLG  112 (400)
T ss_pred             ccccCcCchhhcCCCCceEEEeeccccCCCCceecCCceeecccccccCCceEEEecCCchHHHHHHHhh
Confidence            3445555553 899999999999999886 8999999999999999999999999988888888887654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	87
1vji_A	372	Gene Product Of At1g76680 From Arabidopsis Thaliana		4e-17
1icp_A	376	Crystal Structure Of 12-Oxophytodienoate Reductase		2e-13
2hs8_A	402	Crystal Structure Of The Y364f Mutant Of 12- Oxophy		5e-08
2hs6_A	402	Crystal Structure Of The E291k Mutant Of 12- Oxophy		5e-08
3hgo_A	402	Crystal Structure Of The F74yH244Y OPR3 DOUBLE MUTA		5e-08
1q45_A	391	12-0xo-Phytodienoate Reductase Isoform 3 Length = 3		8e-08
3gx9_A	377	Structure Of Morphinone Reductase N189a Mutant In C		7e-06
2r14_A	377	Structure Of Morphinone Reductase In Complex With T		7e-06
1gwj_A	377	Morphinone Reductase Length = 377		8e-06

>pdb|1VJI|A Chain A, Gene Product Of At1g76680 From Arabidopsis Thaliana Length = 372

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/51 (72%), Positives = 42/51 (82%)
Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSIT 51
          +VLAPLTR RSY N+P+PH+ +YYSQRT  GGFLI EATGVSDTAQG   T
Sbjct: 27 VVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFLITEATGVSDTAQGYQDT 77

>pdb|1ICP|A Chain A, Crystal Structure Of 12-Oxophytodienoate Reductase 1 From Tomato Complexed With Peg400 Length = 376

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          +VLAPLTR RSY  IP+PH+IL+YSQR+ NGG LI EAT +S+T  G
Sbjct: 31 VVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIG 77

>pdb|2HS8|A Chain A, Crystal Structure Of The Y364f Mutant Of 12- Oxophytodienoate Reductase 3 From Tomato Length = 402

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGL 48
          +VLAP+TR R+ NNIP+     YY QR   GGFLI E T +S T+ G 
Sbjct: 33 VVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGF 80

>pdb|2HS6|A Chain A, Crystal Structure Of The E291k Mutant Of 12- Oxophytodienoate Reductase 3 (Opr3) From Tomato Length = 402

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGL 48
          +VLAP+TR R+ NNIP+     YY QR   GGFLI E T +S T+ G 
Sbjct: 33 VVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGF 80

>pdb|3HGO|A Chain A, Crystal Structure Of The F74yH244Y OPR3 DOUBLE MUTANT FROM Tomato Length = 402

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 31/47 (65%)
Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          +VLAP+TR R+ NNIP+     YY QR   GGFLI E T +S T+ G
Sbjct: 33 VVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAG 79

>pdb|1Q45|A Chain A, 12-0xo-Phytodienoate Reductase Isoform 3 Length = 391

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGL 48
          +VLAP+TR R+ N +P      YY+QRT  GGFLI+E T VS  + G 
Sbjct: 27 VVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSPGSAGF 74

>pdb|3GX9|A Chain A, Structure Of Morphinone Reductase N189a Mutant In Complex With Tetrahydronad Length = 377

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNAR 59
          +++APLTR R+ +++P     +YY QR  + G +I+EAT +S TA+G   T   + +A+
Sbjct: 26 VIMAPLTRSRTPDSVPGRLQQIYYGQRA-SAGLIISEATNISPTARGYVYTPGIWTDAQ 83

>pdb|2R14|A Chain A, Structure Of Morphinone Reductase In Complex With Tetrahydronad Length = 377

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNAR 59
          +++APLTR R+ +++P     +YY QR  + G +I+EAT +S TA+G   T   + +A+
Sbjct: 26 VIMAPLTRSRTPDSVPGRLQQIYYGQRA-SAGLIISEATNISPTARGYVYTPGIWTDAQ 83

>pdb|1GWJ|A Chain A, Morphinone Reductase Length = 377

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNAR 59
          +++APLTR R+ +++P     +YY QR  + G +I+EAT +S TA+G   T   + +A+
Sbjct: 26 VIMAPLTRSRTPDSVPGRLQQIYYGQRA-SAGLIISEATNISPTARGYVYTPGIWTDAQ 83

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	87
1icp_A	376	OPR1, 12-oxophytodienoate reductase 1; beta-alpha-	1e-20
2hsa_B	402	12-oxophytodienoate reductase 3; alpha beta 8 barr	1e-19
2r14_A	377	Morphinone reductase; H-tunnelling, flavoprotein,	2e-18
3tjl_A	407	NADPH dehydrogenase; OLD yellow enzyme, flavin mon	1e-17
1vyr_A	364	Pentaerythritol tetranitrate reductase; oxidoreduc	2e-16
3gka_A	361	N-ethylmaleimide reductase; decode biostructures,	4e-16
2gou_A	365	Oxidoreductase, FMN-binding; OLD yeallow enzyme, f	4e-16
3rnd_A	399	NADPH dehydrogenase 1; TIM barrel, oxidoreductase;	6e-16
3aty_A	379	Tcoye, prostaglandin F2A synthase; alpha/beta barr	3e-14
3l5a_A	419	NADH/flavin oxidoreductase/NADH oxidase; OLD yello	2e-07

>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A* Length = 376

 Score = 82.6 bits (205), Expect = 1e-20
 Identities = 31/47 (65%), Positives = 38/47 (80%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          +VLAPLTR RSY  IP+PH+IL+YSQR+ NGG LI EAT +S+T  G
Sbjct: 31 VVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIG 77

>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A* Length = 402

 Score = 80.0 bits (198), Expect = 1e-19
 Identities = 25/47 (53%), Positives = 31/47 (65%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          +VLAP+TR R+ NNIP+     YY QR   GGFLI E T +S T+ G
Sbjct: 33 VVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAG 79

>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A* Length = 377

 Score = 76.8 bits (190), Expect = 2e-18
 Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 1/47 (2%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          +++APLTR R+ +++P     +YY QR  + G +I+EAT +S TA+G
Sbjct: 26 VIMAPLTRSRTPDSVPGRLQQIYYGQRA-SAGLIISEATNISPTARG 71

>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A* Length = 407

 Score = 74.2 bits (183), Expect = 1e-17
 Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 1  IVLAPLTRVRSY-NNIPRPHSILYYSQR-TINGGFLIAEATGVSDTAQG 47
          IV  P TR R+  ++ P    + YY  R T  G  LI EAT VS  A G
Sbjct: 29 IVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASG 77

>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ... Length = 364

 Score = 71.0 bits (175), Expect = 2e-16
 Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 3/49 (6%)

Query: 1  IVLAPLTRVRSYN--NIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          + +APLTR+RS    +IP P    YY QR  + G +I+EAT +S  A+G
Sbjct: 20 VFMAPLTRLRSIEPGDIPTPLMGEYYRQRA-SAGLIISEATQISAQAKG 67

>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} Length = 361

 Score = 70.2 bits (173), Expect = 4e-16
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 1  IVLAPLTRVRSYN-NIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          I++APLTR R+ +   P      YY++R  + G +I+EAT V+    G
Sbjct: 27 IIMAPLTRARAGDTRTPNALMARYYAERA-SAGLIISEATSVTPQGVG 73

>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A* Length = 365

 Score = 69.8 bits (172), Expect = 4e-16
 Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 3/49 (6%)

Query: 1  IVLAPLTRVRSYN--NIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          IV+ P+TR R+    ++      +YY+QR  + G +++E T +S TA+G
Sbjct: 20 IVMPPMTRSRASQPGDVANHMMAIYYAQRA-SAGLIVSEGTQISPTAKG 67

>3rnd_A NADPH dehydrogenase 1; TIM barrel, oxidoreductase; HET: FMN 3RN; 1.40A {Saccharomyces pastorianus} PDB: 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A* Length = 399

 Score = 69.5 bits (171), Expect = 6e-16
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 4/51 (7%)

Query: 1  IVLAPLTRVRSYN--NIP-RPHSILYYSQR-TINGGFLIAEATGVSDTAQG 47
           V+ PLTR+R+ +  NIP R  ++ YY+QR    G  +I E   +S  A G
Sbjct: 31 AVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGG 81

>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A* Length = 379

 Score = 64.9 bits (159), Expect = 3e-14
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 4/50 (8%)

Query: 1  IVLAPLTRVRSY--NNIPRPHSI-LYYSQRTINGGFLIAEATGVSDTAQG 47
          I++APLTR ++   +++PR  S+  YY  R  + G +IAEAT V     G
Sbjct: 22 IIMAPLTRCQATEDDHVPRTESMLKYYEDRA-SAGLIIAEATMVQPNYTG 70

>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus} Length = 419

 Score = 45.4 bits (108), Expect = 2e-07
 Identities = 9/48 (18%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 1  IVLAPLTRVRS-YNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
           VL+P+T   S          + Y ++R+ + G  +  A  +    + 
Sbjct: 43 FVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKL 90

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	87
3l5l_A	363	Xenobiotic reductase A; TIM barrel, oxidoreductase	99.74
3hgj_A	349	Chromate reductase; TIM barrel, oxidoreductase; HE	99.74
3kru_A	343	NADH:flavin oxidoreductase/NADH oxidase; homotetra	99.74
3l5a_A	419	NADH/flavin oxidoreductase/NADH oxidase; OLD yello	99.73
3gr7_A	340	NADPH dehydrogenase; flavin, FMN, beta-alpha-barre	99.73
4ab4_A	362	Xenobiotic reductase B; oxidoreductase, OLD yellow	99.7
3gka_A	361	N-ethylmaleimide reductase; decode biostructures,	99.7
3tjl_A	407	NADPH dehydrogenase; OLD yellow enzyme, flavin mon	99.7
3aty_A	379	Tcoye, prostaglandin F2A synthase; alpha/beta barr	99.69
4a3u_A	358	NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET	99.68
4gbu_A	400	NADPH dehydrogenase 1; alpha/beta barrel, enenone	99.67
2hsa_B	402	12-oxophytodienoate reductase 3; alpha beta 8 barr	99.67
1icp_A	376	OPR1, 12-oxophytodienoate reductase 1; beta-alpha-	99.67
1z41_A	338	YQJM, probable NADH-dependent flavin oxidoreductas	99.63
1vyr_A	364	Pentaerythritol tetranitrate reductase; oxidoreduc	99.62
2r14_A	377	Morphinone reductase; H-tunnelling, flavoprotein,	99.6
2gou_A	365	Oxidoreductase, FMN-binding; OLD yeallow enzyme, f	99.58
1ps9_A	671	2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel	99.47
1o94_A	729	Tmadh, trimethylamine dehydrogenase; electron tran	99.22
3k30_A	690	Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi	99.09
1vhn_A	318	Putative flavin oxidoreducatase; structural genomi	93.93
3b0p_A	350	TRNA-dihydrouridine synthase; TIM barrel, oxidored	93.49
2nuw_A	288	2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho a	83.9
1w3i_A	293	EDA, 2-keto-3-deoxy gluconate aldolase; archaeal m	82.81

>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*

Probab=99.74  E-value=1.3e-18  Score=130.06  Aligned_cols=68  Identities=15%  Similarity=0.137  Sum_probs=64.5

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      ||||||++++++||.+|+++++||++||+| +||||+|++.|++.++.+++++++|+|+++++||+|-.
T Consensus        19 iv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~   87 (363)
T 3l5l_A           19 IAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPEGRITPGCAGIWSDAHAQAFVPVVQ   87 (363)
T ss_dssp             EEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTCCBCSSHHHHHHHHHHHH
T ss_pred             eEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCccccCCCCcceecCHHHHHHHHHHHH
Confidence            689999998778999999999999999995 89999999999999999999999999999999999875

>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*

Probab=99.74  E-value=1.3e-18  Score=129.36  Aligned_cols=68  Identities=16%  Similarity=0.196  Sum_probs=64.3

Q ss_pred             CEEccCCCCcCC-CCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSY-NNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~-dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      ||||||++++++ ||.+|+++++||++||+| +||||+|++.|++.++.+++++++|+|+|+++||+|-.
T Consensus        19 iv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~   88 (349)
T 3hgj_A           19 LAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGLKELAR   88 (349)
T ss_dssp             EEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSGGGHHHHHHHHH
T ss_pred             eEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeecccccCCCCcCccCcHHHHHHHHHHHH
Confidence            689999998885 999999999999999995 89999999999999999999999999999999999865

>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*

Probab=99.74  E-value=2.2e-18  Score=128.59  Aligned_cols=68  Identities=19%  Similarity=0.318  Sum_probs=64.5

Q ss_pred             CEEccCCCCcCC-CCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSY-NNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~-dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      ||||||++++++ ||.+|+++++||++||+| +||||+|++.|++.++.+++++++|+|+++++||+|-.
T Consensus        19 iv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~~~~~~~   88 (343)
T 3kru_A           19 IMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIVD   88 (343)
T ss_dssp             EEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHHHHHHH
T ss_pred             ecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCccccccccccCHHHHHHHHHHHH
Confidence            689999999885 999999999999999995 89999999999999999999999999999999999865

>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}

Probab=99.73  E-value=2e-18  Score=131.67  Aligned_cols=68  Identities=18%  Similarity=0.119  Sum_probs=64.7

Q ss_pred             CEEccCCCCcC-CCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRS-YNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~-~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      ||||||+++++ +||.+|+++++||++||+|+||||+|++.|++.++.+++++++|+|+++++||+|-.
T Consensus        43 iv~aPm~~~~a~~dg~~t~~~~~yy~~rA~G~GLiIte~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~  111 (419)
T 3l5a_A           43 FVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFEYGFNIDHDACIPGLTNMAS  111 (419)
T ss_dssp             EEECCCCCCCSCTTCCCCHHHHHHHHHTTTSCSEEEEEEEESSGGGCCSTTCEECSSGGGHHHHHHHHH
T ss_pred             eEeCCCCCCccCCCCCCCHHHHHHHHHHhcCCcEEEecceEeCcccccCCCccccccHHHHHHHHHHHH
Confidence            68999999988 599999999999999999899999999999999999999999999999999999865

>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*

Probab=99.73  E-value=2.1e-18  Score=128.17  Aligned_cols=68  Identities=21%  Similarity=0.272  Sum_probs=64.2

Q ss_pred             CEEccCCCCcCC--CCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSY--NNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~--dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      ||||||+++++.  ||.+|+++++||++||+| +||||+|++.|++.++.+++++++|+|+++++||+|-.
T Consensus        20 iv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~   90 (340)
T 3gr7_A           20 IVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVG   90 (340)
T ss_dssp             EEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHHHHHHHH
T ss_pred             eEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHHHHHHHHHH
Confidence            689999998874  999999999999999996 89999999999999999999999999999999999865

>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}

Probab=99.70  E-value=1.8e-17  Score=124.57  Aligned_cols=67  Identities=31%  Similarity=0.434  Sum_probs=63.8

Q ss_pred             CEEccCCCCcC-CCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRS-YNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~-~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      ||||||+++++ +||.+|+++++||++||+ +||||+|++.|++.++.+++++++|+|+++++||+|-.
T Consensus        19 iv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~   86 (362)
T 4ab4_A           19 IIMAPLTRCRADEGRVPNALMAEYYVQRAS-AGLILSEATSVSPMGVGYPDTPGIWNDEQVRGWNNVTK   86 (362)
T ss_dssp             EEECCCCCCCCBTTTBCCHHHHHHHHHTTT-SSEEEEEEEESSGGGCCSTTCCBCSSHHHHHHHHHHHH
T ss_pred             cEECCccCCccCCCCCCCHHHHHHHHHHHh-hCEEeeeeeEecccccCCCCCCCcCCHHHHHHHHHHHH
Confidence            68999999988 599999999999999999 89999999999999999999999999999999999865

>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0

Probab=99.70  E-value=1.9e-17  Score=124.44  Aligned_cols=67  Identities=30%  Similarity=0.428  Sum_probs=63.8

Q ss_pred             CEEccCCCCcC-CCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRS-YNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~-~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      ||||||+++++ +||.+|+++++||++||+ +||||+|++.|++.++.+++++++|+|+++++||+|-.
T Consensus        27 iv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~   94 (361)
T 3gka_A           27 IIMAPLTRARAGDTRTPNALMARYYAERAS-AGLIISEATSVTPQGVGYASTPGIWSPEQVDGWRLVTD   94 (361)
T ss_dssp             EEECCCCCCCSTTTTCCCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHHH
T ss_pred             cEECCCCCCccCCCCCCCHHHHHHHHHHHh-CCEEEEcceeecccccCCCCCCccCCHHHHHHHHHHHH
Confidence            68999999988 599999999999999999 89999999999999999999999999999999999865

>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*

Probab=99.70  E-value=1.7e-17  Score=126.59  Aligned_cols=68  Identities=29%  Similarity=0.361  Sum_probs=64.0

Q ss_pred             CEEccCCCCcC-CCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCC-CccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRS-YNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSI-TRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~-~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~-~~~i~~d~~i~~Lk~~~~   68 (87)
                      ||||||+++++ +||.||+++++||++||+| +||||+|++.|++.++.+++ ++++|+|+++++||+|..
T Consensus        29 iv~aPm~~~~a~~~g~pt~~~~~yY~~rA~gG~GLIIte~~~V~~~g~~~~~~~~gi~~d~~i~~~k~l~~   99 (407)
T 3tjl_A           29 IVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGYEGAAPGIWTDKHAKAWKVITD   99 (407)
T ss_dssp             EEBCCCCCCBSCTTSCCBHHHHHHHHHTCCSTTCEEEEEEEESSGGGCCCSSBCCBCSSHHHHHHHHHHHH
T ss_pred             cEECCCCCCccCCCCCCCHHHHHHHHHHHcCCceEEEEcceEECCccCCCCCcCcccCCHHHHHHHHHHHH
Confidence            68999999887 5899999999999999995 89999999999999999999 999999999999999865

>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*

Probab=99.69  E-value=3.1e-17  Score=123.65  Aligned_cols=67  Identities=30%  Similarity=0.508  Sum_probs=63.3

Q ss_pred             CEEccCCCCcCC--CCCCC-HHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSY--NNIPR-PHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~--dG~~t-~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      ||||||+++++.  ||.+| +++++||++|| |+||||+|++.|++.++.+++++++|+|+|+++||+|-.
T Consensus        22 iv~apm~~~~a~~~~g~pt~~~~~~yY~~rA-~~GLIite~~~v~~~g~~~~~~~gi~~d~~i~~~k~~~~   91 (379)
T 3aty_A           22 IIMAPLTRCQATEDDHVPRTESMLKYYEDRA-SAGLIIAEATMVQPNYTGFLTEPGIYSDAQIEEWRKIVD   91 (379)
T ss_dssp             EEECCCCCCCBCTTTCCBCHHHHHHHHHTTT-TSSEEEEEEEESSTTCCSSSSCCBSSSHHHHHHHHHHHH
T ss_pred             cEECCcCCCcccCCCCccCHHHHHHHHHHHh-CCCeEEECceecccccccCCCCCCcCCHHHHHHHHHHHH
Confidence            689999999874  89999 99999999999 699999999999999999999999999999999999864

>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}

Probab=99.68  E-value=6.1e-17  Score=120.93  Aligned_cols=67  Identities=31%  Similarity=0.469  Sum_probs=63.0

Q ss_pred             CEEccCCCCcC-CCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRS-YNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~-~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      ||||||+++++ +||.+|+++++||++||+ +||||+|++.|++.+..+++++++|+|+++++||+|-.
T Consensus        19 iv~apm~~~~a~~dg~~t~~~~~~y~~rA~-gGliite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~   86 (358)
T 4a3u_A           19 IWMAPLTRGRATRDHVPTEIMAEYYAQRAS-AGLIISEATGISQEGLGWPYAPGIWSDAQVEAWLPITQ   86 (358)
T ss_dssp             EEECCCCCCCSCTTCCCCHHHHHHHHHTTT-SSSEEEEEEESSTTTCCSTTCCBCSSHHHHHHHHHHHH
T ss_pred             eEEcccCCCccCCCCCCCHHHHHHHHHHcC-CCEEEEeeeEECccccCCCCCcccCchHhHHHHHHHHH
Confidence            68999999888 599999999999999998 48999999999999999999999999999999999864

>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*

Probab=99.67  E-value=3.9e-17  Score=123.47  Aligned_cols=68  Identities=25%  Similarity=0.368  Sum_probs=61.9

Q ss_pred             CEEccCCCCcC-CCCCCC--HHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRS-YNNIPR--PHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~-~dG~~t--~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      ||||||+++++ .||.++  |.+++||++||+| +||||+|++.|++.++.+++++++|+|+|+++||+|-.
T Consensus        32 iv~aPm~~~~a~~~g~v~~~d~~~~yy~~rA~GG~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~d  103 (400)
T 4gbu_A           32 AVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNAPGVWSEEQMVEWTKIFN  103 (400)
T ss_dssp             EEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEECSCEESSGGGCCCTTSCBSSSHHHHHHHHHHHH
T ss_pred             CEeCCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEEcCeEECccccCCCCCCccCCHHHHHHHHHHHH
Confidence            68999999988 577654  6799999999996 89999999999999999999999999999999999875

>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*

Probab=99.67  E-value=7.3e-17  Score=122.41  Aligned_cols=67  Identities=39%  Similarity=0.582  Sum_probs=63.8

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVF   67 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~   67 (87)
                      ||||||+++++++|.+|+++++||++||+|+||||+|.+.|++.+..+++++++|+|+++++||+|.
T Consensus        33 iv~aPm~~~~a~~g~pt~~~~~yy~~rA~G~GLIitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~   99 (402)
T 2hsa_B           33 VVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIV   99 (402)
T ss_dssp             EEECCCCCCCSGGGCCCHHHHHHHHHHCCTTCEEECCCEESSTTCCCSTTCCBCSSHHHHHHHHHHH
T ss_pred             eEECCCCCCcCCCCCCCHHHHHHHHHHhccCCEEEecceeeccccccCCCCcccCCHHHHHHHHHHH
Confidence            6899999998866799999999999999999999999999999999999999999999999999995

>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*

Probab=99.67  E-value=6.4e-17  Score=121.66  Aligned_cols=67  Identities=46%  Similarity=0.665  Sum_probs=63.6

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVF   67 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~   67 (87)
                      ||||||+++++.+|.+|+++++||++||+|+||||+|.+.|++.+..+++++++|+|+++++||+|.
T Consensus        31 iv~aPm~~~~a~~g~pt~~~~~yy~~rA~g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~   97 (376)
T 1icp_A           31 VVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPIV   97 (376)
T ss_dssp             EEECCCCCCCCGGGSCCHHHHHHHHHTCCTTCEEECCCEECSGGGCCSTTCCBCSSHHHHHHHHHHH
T ss_pred             cEECCcCcCcCCCCCCCHHHHHHHHHhcCCeeEEEECceeeccccccCcccCccCCHHHHHHHHHHH
Confidence            6899999998866899999999999999999999999999999999999999999999999999995

>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*

Probab=99.63  E-value=2.6e-16  Score=116.35  Aligned_cols=67  Identities=19%  Similarity=0.242  Sum_probs=63.1

Q ss_pred             CEEccCCCCcC--CCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhh
Q 048070            1 IVLAPLTRVRS--YNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVF   67 (87)
Q Consensus         1 IVmAPM~~~~~--~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~   67 (87)
                      |+||||++.++  +||.+|+++++||++||+| +||||+|.+.|++.+..+++++++|+|+++++||+|.
T Consensus        20 iv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~   89 (338)
T 1z41_A           20 IVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLT   89 (338)
T ss_dssp             EEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHH
T ss_pred             cEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHH
Confidence            68999999887  4899999999999999995 8999999999999999999999999999999999986

>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...

Probab=99.62  E-value=7.3e-16  Score=115.40  Aligned_cols=66  Identities=33%  Similarity=0.469  Sum_probs=62.5

Q ss_pred             CEEccCCCCcC--CCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhh
Q 048070            1 IVLAPLTRVRS--YNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVF   67 (87)
Q Consensus         1 IVmAPM~~~~~--~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~   67 (87)
                      ||||||++.++  +||.+|+.+++||.+|| |+||||+|.+.|++.+..+++++++|+|+++++||+|.
T Consensus        20 iv~aPm~~~~a~~~~g~~t~~~~~~y~~rA-g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~   87 (364)
T 1vyr_A           20 VFMAPLTRLRSIEPGDIPTPLMGEYYRQRA-SAGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKIT   87 (364)
T ss_dssp             EEECCCCCCCCBTTTTBCCHHHHHHHHHTT-TSSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHHHHHH
T ss_pred             cEECCCCCCcccCCCCCCCHHHHHHHHHHh-cCCEEEEccccccccccCCCCCcccCCHHHHHHHHHHH
Confidence            68999999886  58999999999999999 69999999999999999999999999999999999995

>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*

Probab=99.60  E-value=7.9e-16  Score=115.84  Aligned_cols=66  Identities=35%  Similarity=0.517  Sum_probs=62.8

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVF   67 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~   67 (87)
                      ||||||++++++||.+|+.+++||.+||+ +||||+|.+.|++.+..+++++++|+|+++++||+|.
T Consensus        26 iv~aPm~~~~a~~g~pt~~~~~~y~~rA~-~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~   91 (377)
T 2r14_A           26 VIMAPLTRSRTPDSVPGRLQQIYYGQRAS-AGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGVV   91 (377)
T ss_dssp             EEECCCCCCCCTTSCCCHHHHHHHHHTTT-SSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHHH
T ss_pred             eEECCCcCCcCCCCCCCHHHHHHHHHHhc-CCEEEEcceeeccccccCCCCcccCCHHHHHHHHHHH
Confidence            68999999888899999999999999996 8999999999999999999999999999999999995

>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*

Probab=99.58  E-value=1.8e-15  Score=113.31  Aligned_cols=66  Identities=29%  Similarity=0.468  Sum_probs=62.4

Q ss_pred             CEEccCCCCcC--CCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhh
Q 048070            1 IVLAPLTRVRS--YNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVF   67 (87)
Q Consensus         1 IVmAPM~~~~~--~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~   67 (87)
                      ||||||++.++  +||.+|+++++||.+||+ +||||+|.+.|++.+..+++++++|+|+++++||+|.
T Consensus        20 iv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~-~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~   87 (365)
T 2gou_A           20 IVMPPMTRSRASQPGDVANHMMAIYYAQRAS-AGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGWRIVT   87 (365)
T ss_dssp             EEECCCCCCCCBTTTTBCCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHH
T ss_pred             eEECCCCCCcccCCCCCCCHHHHHHHHHHhc-CCEEEECceeecccccCCCCCCccCCHHHHHHHHHHH
Confidence            68999999886  499999999999999996 8999999999999999999999999999999999995

>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1

Probab=99.47  E-value=3.3e-14  Score=111.78  Aligned_cols=67  Identities=6%  Similarity=-0.017  Sum_probs=61.4

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVF   67 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~   67 (87)
                      |+||||++++++++.+++++++||++||+| +||||+|.+.|++.+..+++++++|+|+++++||++.
T Consensus        20 i~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (671)
T 1ps9_A           20 VLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTIT   87 (671)
T ss_dssp             EEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHH
T ss_pred             eEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHH
Confidence            589999987765567789999999999995 8999999999999999999999999999999999985

>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*

Probab=99.22  E-value=8.2e-12  Score=99.41  Aligned_cols=65  Identities=9%  Similarity=-0.021  Sum_probs=55.9

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCC-CccCCCHHHHhhHHHhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSI-TRNSFLNARLWYLYWVF   67 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~-~~~i~~d~~i~~Lk~~~   67 (87)
                      |+||||++.++ ++.++ ++++||++||+| +||||+|.+.|++.+..+++ ++++|+|+++++||++.
T Consensus        24 iv~apm~~~~~-~~~~~-~~~~~y~~ra~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (729)
T 1o94_A           24 FYQVPHCIGAG-SDKPG-FQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMT   90 (729)
T ss_dssp             EEECCCCCSCT-TTCHH-HHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHH
T ss_pred             cEECCCcCCcC-CCCcH-HHHHHHHHHhcCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHH
Confidence            68999998654 34443 999999999995 89999999999998877665 58999999999999995

>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}

Probab=99.09  E-value=7.6e-11  Score=93.04  Aligned_cols=65  Identities=9%  Similarity=-0.020  Sum_probs=53.6

Q ss_pred             CEEccCCCCcCCCCCCCHHH-HHHHHHhccC-CcEEEecccccCCCCCCCCCC-ccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHS-ILYYSQRTIN-GGFLIAEATGVSDTAQGLSIT-RNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~-i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~-~~i~~d~~i~~Lk~~~~   68 (87)
                      |+||||++..   |.+++.. ..||++||+| +||||+|.+.|++.+..+++. +++|+|+++++||++..
T Consensus        29 iv~apm~~~~---~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (690)
T 3k30_A           29 FYQVPHCNGM---GYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIAD   96 (690)
T ss_dssp             EEECCCCCSC---SSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHHH
T ss_pred             eEeCCCcCCC---CCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHHH
Confidence            6899998753   4455444 4577889996 899999999999998888875 69999999999999975

>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1

Probab=93.93  E-value=0.021  Score=41.22  Aligned_cols=34  Identities=15%  Similarity=0.240  Sum_probs=26.5

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhcc-CCcEEEecccccCC
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTI-NGGFLIAEATGVSD   43 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAk-GaGLIIte~~~V~~   43 (87)
                      |++|||+...  |       ..|+..+++ |+||+++|.+.+++
T Consensus         7 i~~APM~~~t--~-------~~~r~~~~~~G~gli~te~~~~~~   41 (318)
T 1vhn_A            7 VGLAPMAGYT--D-------SAFRTLAFEWGADFAFSEMVSAKG   41 (318)
T ss_dssp             EEECCCTTTC--S-------HHHHHHHHTTTCCCEECSCEEHHH
T ss_pred             EEECCCCCCC--c-------HHHHHHHHHHCcCEEEeCCEEEcc
Confidence            5899999542  1       478888887 58999999987754

>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*

Probab=93.49  E-value=0.028  Score=41.31  Aligned_cols=35  Identities=17%  Similarity=0.185  Sum_probs=27.6

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccCCcEEEecccccC
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVS   42 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~   42 (87)
                      |++|||..       +|+....|+.+++.|.||+++|.+.++
T Consensus         6 iv~APM~g-------~td~~~r~~~r~~Gg~gli~te~~~~~   40 (350)
T 3b0p_A            6 LSVAPMVD-------RTDRHFRFLVRQVSLGVRLYTEMTVDQ   40 (350)
T ss_dssp             EEECCCTT-------TSSHHHHHHHHHHCSSSBEECCCEEHH
T ss_pred             EEECCCCC-------CCHHHHHHHHHHcCCCCEEEeCCEEec
Confidence            58999982       789999997655545799999988654

>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A

Probab=83.90  E-value=2.4  Score=30.06  Aligned_cols=62  Identities=5%  Similarity=0.054  Sum_probs=44.1

Q ss_pred             EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhcCee
Q 048070            2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASPFG   72 (87)
Q Consensus         2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~~~~   72 (87)
                      +++||.|...+||.+..+.++-+.++  ..| -|+++.+.+         .....+..+|..+-++.+.+.--|
T Consensus         3 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtT---------GE~~~Ls~eEr~~v~~~~~~~~~g   67 (288)
T 2nuw_A            3 IISPIITPFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTT---------GLGPALSKDEKRQNLNALYDVTHK   67 (288)
T ss_dssp             EEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEETSTT---------TTGGGSCHHHHHHHHHHHTTTCSC
T ss_pred             eEEeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHHhCC
Confidence            46788887777888886666555554  236 588887755         235668888999989888876666

>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*

Probab=82.81  E-value=3.1  Score=29.55  Aligned_cols=62  Identities=10%  Similarity=0.090  Sum_probs=43.6

Q ss_pred             EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhcCee
Q 048070            2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASPFG   72 (87)
Q Consensus         2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~~~~   72 (87)
                      +.+||.|...+||.+..+.++-+.++  ..| -|+++.+.+         .....+..+|..+-++.+.+.--|
T Consensus         3 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt---------GE~~~Ls~eEr~~v~~~~~~~~~g   67 (293)
T 1w3i_A            3 IITPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTT---------GLGPSLSPEEKLENLKAVYDVTNK   67 (293)
T ss_dssp             EEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTT---------TTGGGSCHHHHHHHHHHHHTTCSC
T ss_pred             eEEEeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHHcCC
Confidence            46788887777888876655555554  236 588887765         235568888888888888876656

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	87
d1icpa_	364	c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, O	1e-10
d1q45a_	380	c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, O	8e-10
d1gwja_	374	c.1.4.1 (A:) Morphinone reductase {Pseudomonas put	4e-08
d1vyra_	363	c.1.4.1 (A:) Pentaerythritol tetranirate reductase	9e-07
d1z41a1	337	c.1.4.1 (A:2-338) NADPH dehydrogenase NamA {Bacill	2e-06
d1ps9a1	330	c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-ter	5e-06
d1oyaa_	399	c.1.4.1 (A:) Old yellow enzyme (OYE) {Lager yeast	1e-05

>d1icpa_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]} Length = 364

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: 12-oxophytodienoate reductase (OPR, OYE homolog)
species: Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]

 Score = 53.8 bits (128), Expect = 1e-10
 Identities = 31/47 (65%), Positives = 38/47 (80%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          +VLAPLTR RSY  IP+PH+IL+YSQR+ NGG LI EAT +S+T  G
Sbjct: 22 VVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIG 68

>d1q45a_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]} Length = 380

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: 12-oxophytodienoate reductase (OPR, OYE homolog)
species: Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]

 Score = 51.1 bits (121), Expect = 8e-10
 Identities = 24/47 (51%), Positives = 31/47 (65%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          +VLAP+TR R+ N +P      YY+QRT  GGFLI+E T VS  + G
Sbjct: 20 VVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSPGSAG 66

>d1gwja_ c.1.4.1 (A:) Morphinone reductase {Pseudomonas putida [TaxId: 303]} Length = 374

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: Morphinone reductase
species: Pseudomonas putida [TaxId: 303]

 Score = 46.4 bits (109), Expect = 4e-08
 Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 1/47 (2%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG 47
          +++APLTR R+ +++P     +YY QR  + G +I+EAT +S TA+G
Sbjct: 23 VIMAPLTRSRTPDSVPGRLQQIYYGQRA-SAGLIISEATNISPTARG 68

>d1vyra_ c.1.4.1 (A:) Pentaerythritol tetranirate reductase {Enterobacter cloacae [TaxId: 550]} Length = 363

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: Pentaerythritol tetranirate reductase
species: Enterobacter cloacae [TaxId: 550]

 Score = 42.6 bits (99), Expect = 9e-07
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 7/82 (8%)

Query: 1  IVLAPLTRVRSY--NNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQG----LSITRNS 54
          + +APLTR+RS    +IP P    YY QR  + G +I+EAT +S  A+G      +    
Sbjct: 19 VFMAPLTRLRSIEPGDIPTPLMGEYYRQRA-SAGLIISEATQISAQAKGYAGAPGLHSPE 77

Query: 55 FLNARLWYLYWVFASPFGIMII 76
           + A       V A    I + 
Sbjct: 78 QIAAWKKITAGVHAEDGRIAVQ 99

>d1z41a1 c.1.4.1 (A:2-338) NADPH dehydrogenase NamA {Bacillus subtilis [TaxId: 1423]} Length = 337

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: NADPH dehydrogenase NamA
species: Bacillus subtilis [TaxId: 1423]

 Score = 41.5 bits (96), Expect = 2e-06
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 1  IVLAPLTRVRSY--NNIPRPHSILYYSQRTING-GFLIAEATGVSDTAQGLSITRNSFLN 57
          IV++P+    S+  +    P  + +Y  R I   G +I EA+ V+   +        + +
Sbjct: 19 IVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSD 78

Query: 58 ARLWYLYWVFA 68
            +     +  
Sbjct: 79 EHIEGFAKLTE 89

>d1ps9a1 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 330

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: 2,4-dienoyl-CoA reductase, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 40.3 bits (93), Expect = 5e-06
 Identities = 5/48 (10%), Positives = 16/48 (33%), Gaps = 1/48 (2%)

Query: 1  IVLAPLTRVRSYNNIPRPHSILYYSQRTING-GFLIAEATGVSDTAQG 47
          +++  +                +Y++R  +G   +++       T  G
Sbjct: 20 VLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVG 67

>d1oyaa_ c.1.4.1 (A:) Old yellow enzyme (OYE) {Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]} Length = 399

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: Old yellow enzyme (OYE)
species: Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]

 Score = 39.1 bits (90), Expect = 1e-05
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 1  IVLAPLTRVRSY--NNIP-RPHSILYYSQRTING-GFLIAEATGVSDTAQG 47
           V+ PLTR+R+    NIP R  ++ YY+QR       +I E   +S  A G
Sbjct: 31 AVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGG 81

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	87
d1z41a1	337	NADPH dehydrogenase NamA {Bacillus subtilis [TaxId	99.67
d1q45a_	380	12-oxophytodienoate reductase (OPR, OYE homolog) {	99.63
d1ps9a1	330	2,4-dienoyl-CoA reductase, N-terminal domain {Esch	99.62
d1oyaa_	399	Old yellow enzyme (OYE) {Lager yeast (Saccharomyce	99.6
d1icpa_	364	12-oxophytodienoate reductase (OPR, OYE homolog) {	99.59
d1gwja_	374	Morphinone reductase {Pseudomonas putida [TaxId: 3	99.58
d1vyra_	363	Pentaerythritol tetranirate reductase {Enterobacte	99.49
d1djqa1	340	Trimethylamine dehydrogenase, N-terminal domain {M	99.31
d1w3ia_	293	2-keto-3-deoxy gluconate aldolase Eda {Sulfolobus	86.89

>d1z41a1 c.1.4.1 (A:2-338) NADPH dehydrogenase NamA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: NADPH dehydrogenase NamA
species: Bacillus subtilis [TaxId: 1423]

Probab=99.67  E-value=1.9e-17  Score=120.95  Aligned_cols=68  Identities=19%  Similarity=0.236  Sum_probs=63.4

Q ss_pred             CEEccCCCCcC-C-CCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRS-Y-NNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~-~-dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+||||++..+ + ||.+|+++++||++||+| +||||+|++.|++.+..+++++++|+|+++++||+|-.
T Consensus        19 iv~aPm~~~~~~~~~G~~t~~~~~~y~~rA~gG~GlIite~~~V~~~~~~~~~~~~~~~d~~i~~~k~l~~   89 (337)
T d1z41a1          19 IVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTE   89 (337)
T ss_dssp             EEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHH
T ss_pred             EEeCccCCCccCCCCCCCCHHHHHHHHHHHcCCceEEEECcEEEccccccccCccccccHHHHHHHHHHHH
Confidence            68999998866 3 899999999999999995 89999999999999999999999999999999999865

>d1q45a_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: 12-oxophytodienoate reductase (OPR, OYE homolog)
species: Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]

Probab=99.63  E-value=2.1e-16  Score=116.41  Aligned_cols=68  Identities=37%  Similarity=0.550  Sum_probs=64.4

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+|+||++..++||.+|+++++||++||+|+|+||+|++.|++.+..+++++++|+|+++++||++..
T Consensus        20 iv~~pm~~~~~~~G~p~~~~~~~y~~rA~Ggglii~~~~~V~~~~~~~~~~~~~~~d~~i~~~k~l~~   87 (380)
T d1q45a_          20 VVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSPGSAGFPHVPGIYSDEQVEAWKQVVE   87 (380)
T ss_dssp             EEECCCCCCCSGGGCCCHHHHHHHHHTCCTTCEEEEEEEESSTTCCCSTTCCBCSSHHHHHHHHHHHH
T ss_pred             eEEcccCCCcCCCCCCCHHHHHHHHHHHhCCEEEEEcceEECCCcCCCCCCcccCCHHHHHHHHHHHH
Confidence            68999999887899999999999999999879999999999999999999999999999999999875

>d1ps9a1 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: 2,4-dienoyl-CoA reductase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=1.2e-16  Score=116.40  Aligned_cols=68  Identities=6%  Similarity=-0.017  Sum_probs=63.6

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      ||||||+++.+.+|.+|+++++||++||+| +||||+|++.|++.+..+++++++|+|+++++||+|-.
T Consensus        20 iv~apm~~~~~~~~~~~~~~~~yy~~rA~gG~glIi~e~~~v~~~~~~~~~~~~~~~d~~i~~~k~l~~   88 (330)
T d1ps9a1          20 VLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITE   88 (330)
T ss_dssp             EEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHHH
T ss_pred             cEeCCCCCCcCCCCCCcHHHHHHHHHHHhCCeEEEEEeeeEEcCCccccCCCcccCCccccccccccee
Confidence            689999988777888999999999999995 89999999999999999999999999999999999864

>d1oyaa_ c.1.4.1 (A:) Old yellow enzyme (OYE) {Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: Old yellow enzyme (OYE)
species: Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]

Probab=99.60  E-value=3.7e-16  Score=116.26  Aligned_cols=68  Identities=25%  Similarity=0.368  Sum_probs=61.6

Q ss_pred             CEEccCCCCcC-CCCCCC--HHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRS-YNNIPR--PHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~-~dG~~t--~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+||||+++++ .||.++  |.+++||++||+| +||||+|++.|++.+..+++++++|+|+++++||++..
T Consensus        31 iv~apm~~~~a~~~G~~~~~d~~i~yy~~rA~GG~GlIi~e~~~V~~~g~~~~~~~~l~~d~~i~~~k~l~~  102 (399)
T d1oyaa_          31 AVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNAPGVWSEEQMVEWTKIFN  102 (399)
T ss_dssp             EEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEEEEEEESSGGGCCCTTSCBSSSHHHHHHHHHHHH
T ss_pred             cEECCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEeccEEECcccCCCCCCCccCCHHHHHHHhHHHH
Confidence            68999999887 578765  6689999999996 89999999999999999999999999999999999854

>d1icpa_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: 12-oxophytodienoate reductase (OPR, OYE homolog)
species: Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]

Probab=99.59  E-value=6.1e-16  Score=113.82  Aligned_cols=68  Identities=46%  Similarity=0.653  Sum_probs=64.3

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+||||+++++++|.+++++++||++||+|+||||+|++.|++.+..+++++++++|+++++||+|..
T Consensus        22 iv~apm~~~~a~~g~p~~~~~~~y~~rA~gGgliite~~~V~~~g~~~~~~~~l~~d~~i~~~k~l~~   89 (364)
T d1icpa_          22 VVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPIVD   89 (364)
T ss_dssp             EEECCCCCCCCGGGSCCHHHHHHHHHTCCTTCEEECCCEECSGGGCCSTTCCBCSSHHHHHHHHHHHH
T ss_pred             cEecccCCCcCCCCCCCHHHHHHHHHHHhCceEEEEccEEECCcccCCCCCceechhhhhhhHHHHHH
Confidence            58999999888889999999999999999779999999999999999999999999999999999975

>d1gwja_ c.1.4.1 (A:) Morphinone reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: Morphinone reductase
species: Pseudomonas putida [TaxId: 303]

Probab=99.58  E-value=8.6e-16  Score=113.38  Aligned_cols=67  Identities=34%  Similarity=0.506  Sum_probs=62.8

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+||||+++.++||.+|+.+++||++||+| ||||+|++.|++.++.+++++++|+|+++++||++-.
T Consensus        23 iv~apm~~~~~~dg~~t~~~~~yy~~rA~g-Glii~e~~~V~~~~~~~~~~~~i~~d~~i~~~k~l~~   89 (374)
T d1gwja_          23 VIMAPLTRSRTPDSVPGRLQQIYYGQRASA-GLIISEATNISPTARGYVYTPGIWTDAQEAGWKGVVE   89 (374)
T ss_dssp             EEECCCCCCCCSSSCCCHHHHHHHHHTTTS-SEEEEEEEESSGGGCCBTTCCBCSSHHHHHHHHHHHH
T ss_pred             eEEcccCCCCCCCCCCCHHHHHHHHHHhCC-CEEEEEeEEECCccCCCCCCCccchhhhhhhhhhHHH
Confidence            689999998888999999999999999984 8999999999999999999999999999999999853

>d1vyra_ c.1.4.1 (A:) Pentaerythritol tetranirate reductase {Enterobacter cloacae [TaxId: 550]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: Pentaerythritol tetranirate reductase
species: Enterobacter cloacae [TaxId: 550]

Probab=99.49  E-value=2.3e-14  Score=105.29  Aligned_cols=68  Identities=34%  Similarity=0.452  Sum_probs=61.0

Q ss_pred             CEEccCCCCcC-CC-CCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070            1 IVLAPLTRVRS-YN-NIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS   69 (87)
Q Consensus         1 IVmAPM~~~~~-~d-G~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~   69 (87)
                      ||||||+++++ ++ +.+++++++||++||+ +||||+|++.|++.++.+++++++|+|+++++||+|...
T Consensus        19 iv~apm~~~~a~~~g~~~~~~~~~yy~~ra~-~Glii~e~~~V~~~~~~~~~~~~l~~d~~i~~~k~l~~~   88 (363)
T d1vyra_          19 VFMAPLTRLRSIEPGDIPTPLMGEYYRQRAS-AGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKITAG   88 (363)
T ss_dssp             EEECCCCCCCCBTTTTBCCHHHHHHHHHTTT-SSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHHHHHHHH
T ss_pred             eEEccccCCcCCCCCCCCHHHHHHHHHHHcC-cCEEEEeeeEECccccCCCCCCccCChhhcccchhhhhh
Confidence            68999999877 45 5679999999999986 689999999999999999999999999999999998753

>d1djqa1 c.1.4.1 (A:1-340) Trimethylamine dehydrogenase, N-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: Trimethylamine dehydrogenase, N-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=99.31  E-value=9.1e-13  Score=95.59  Aligned_cols=66  Identities=8%  Similarity=-0.036  Sum_probs=56.7

Q ss_pred             CEEccCCCCcCCCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCC-CCccCCCHHHHhhHHHhhh
Q 048070            1 IVLAPLTRVRSYNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLS-ITRNSFLNARLWYLYWVFA   68 (87)
Q Consensus         1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~-~~~~i~~d~~i~~Lk~~~~   68 (87)
                      |+||||+++.++++  ++.+..||.+||+| +||||+|.+.|++.+..++ ..+++|+|+++++||++..
T Consensus        24 iv~apm~~~~~~~~--~~~~~~~~~~rA~gG~gliite~~~v~~~~~~~~~~~~~~~~d~~i~~~~~l~~   91 (340)
T d1djqa1          24 FYQVPHAIGAGSDK--PGFQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTD   91 (340)
T ss_dssp             EEECCCCCSCTTTC--HHHHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHH
T ss_pred             eEeCCCCCCCCCCC--CHHHHHHHHHHhccCeEEEEEEEEEeccccccCCCCCccccceeecchhhhhHH
Confidence            68999998776543  47788999999995 8999999999999887755 4788999999999999874

>d1w3ia_ c.1.10.1 (A:) 2-keto-3-deoxy gluconate aldolase Eda {Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: 2-keto-3-deoxy gluconate aldolase Eda
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=86.89  E-value=0.95  Score=29.99  Aligned_cols=69  Identities=14%  Similarity=0.188  Sum_probs=50.5

Q ss_pred             EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhcCeeEEEEeC
Q 048070            2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASPFGIMIIVG   78 (87)
Q Consensus         2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~~~~~~~~~~   78 (87)
                      +++|+.|...+||.+..+.++=+.++  ++| -|+++.+.+.         ....+..+|.++-++.+.+..-+++..+|
T Consensus         3 i~~a~~TPf~~dg~iD~~~~~~~i~~l~~~Gv~gi~~~GttG---------E~~~Ls~~Er~~~~~~~~~~~~~~i~gv~   73 (293)
T d1w3ia_           3 IITPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTG---------LGPSLSPEEKLENLKAVYDVTNKIIFQVG   73 (293)
T ss_dssp             EEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTT---------TGGGSCHHHHHHHHHHHHTTCSCEEEECC
T ss_pred             EEEEeeCCCCCCcCCCHHHHHHHHHHHHHcCCCEEEECeech---------hhhhCCHHHHHHHHHHHHhhccccccccc
Confidence            68899888888898986655555555  246 5888776541         34568888999999988888888777766


Q ss_pred             c
Q 048070           79 N   79 (87)
Q Consensus        79 ~   79 (87)
                      .
T Consensus        74 ~   74 (293)
T d1w3ia_          74 G   74 (293)
T ss_dssp             C
T ss_pred             c
Confidence            4