Citrus Sinensis ID: 048073

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160----
Protein Sequence
MKMSSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccccccccccccEEEcccccHHHHHHHHHcccccccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccccccccccccHccccccccHHHHHHHHHHHHccccccccccccccEEEEEEEEEEEccEEEEEEEEEEccccEEEEEEccccccccccccc
Coil and Loop (DISEMBL)
MKMSSISLALAICFMGSLALLIQtshaqnspqdyldAHNSaraavyvpniiwNDTVAAYAQNysnsriadcnlvhsggpygenlakgsgtfTGTAAVSLWVAEKANynystntcaagkvcgHYTQVVWRNSIRVGCarvqcsngwwfvtcsydppgnyigqkpy
Flexible Loop (DISEMBL)
MKMSSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNgwwfvtcsydppgnyigqkpy
Low Complexity Region (SEG)
MKMSSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY
Disordered region (IsUnstruct)
*****ISLALAICFMGSLALLIQTSHA*****DYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNY******
Disordered Region (DISOPRED)
***SSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY
Disordered Region (DISEMBL)
MKMSSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY
Disordered Region (DISPRO)
MKMSSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQ***
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKMSSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	164	2.2.26 [Sep-21-2011]
Q41359	167	Pathogenesis-related prot	N/A	no	0.878	0.862	0.664	1e-52
Q04108	159	Pathogenesis-related leaf	N/A	no	0.969	1.0	0.585	1e-52
P07053	168	Pathogenesis-related prot	N/A	no	0.920	0.898	0.641	3e-52
P04284	159	Pathogenesis-related leaf	N/A	no	0.969	1.0	0.591	7e-52
P09042	168	Pathogenesis-related prot	N/A	no	0.969	0.946	0.630	8e-52
P11670	177	Basic form of pathogenesi	N/A	no	0.932	0.864	0.580	1e-51
P08299	168	Pathogenesis-related prot	N/A	no	0.841	0.821	0.683	2e-51
P33154	161	Pathogenesis-related prot	no	no	0.932	0.950	0.561	1e-47
Q08697	175	Pathogenesis-related prot	N/A	no	0.920	0.862	0.544	1e-45
Q05968	164	Pathogenesis-related prot	N/A	no	0.871	0.871	0.589	3e-43

>sp|Q41359|PR1_SAMNI Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1

 Score =  205 bits (522), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 97/146 (66%), Positives = 120/146 (82%), Gaps = 2/146 (1%)

Query: 21  LIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGP- 79
           ++Q S AQNSPQDY+DAHN+AR+AV V  + W+++VAA+A+ Y+ SR  DC LVHSG P 
Sbjct: 22  MVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAGDCRLVHSGDPR 81

Query: 80  YGENLAKGSG-TFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCAR 138
           YGENLA GSG   TG  AV +WVAE+ +YN +TNTCA GKVCGHYTQVVWRNS+R+GCAR
Sbjct: 82  YGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVWRNSVRIGCAR 141

Query: 139 VQCSNGWWFVTCSYDPPGNYIGQKPY 164
           V+C+NG WF+TC+Y PPGNY GQ+PY
Sbjct: 142 VRCNNGAWFITCNYSPPGNYAGQRPY 167

Probably involved in the defense reaction of plants against pathogens.
Sambucus nigra (taxid: 4202)

>sp|Q04108|PR04_SOLLC Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1

 Score =  205 bits (522), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 96/164 (58%), Positives = 123/164 (75%), Gaps = 5/164 (3%)

Query: 1   MKMSSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYA 60
           M + +ISL L  C M  +  +  +  AQNSPQDYL  HN ARA V V  + W+  +A+ A
Sbjct: 1   MGLFNISLLLT-CLM--VLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRA 57

Query: 61  QNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVC 120
           QNY+NSR  DCNL+HSG   GENLAKG G FTG AAV LWV+E+ +YNY+TN C  GK+C
Sbjct: 58  QNYANSRAGDCNLIHSGA--GENLAKGGGDFTGRAAVQLWVSERPDYNYATNQCVGGKMC 115

Query: 121 GHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
           GHYTQVVWRNS+R+GC R +C+NGWWF++C+YDP GN++G++PY
Sbjct: 116 GHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWVGERPY 159

Probably involved in the defense reaction of plants against pathogens.

Solanum lycopersicum (taxid: 4081)

>sp|P07053|PR1B_TOBAC Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1

 Score =  204 bits (518), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 100/156 (64%), Positives = 119/156 (76%), Gaps = 5/156 (3%)

Query: 14  FMGSLALLI----QTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIA 69
           F+ S  LL      +SHAQNS QDYLDAHN+ARA V V  + W++ VAAYAQNY +   A
Sbjct: 13  FLVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAA 72

Query: 70  DCNLVHSGGPYGENLAKGSGTF-TGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVW 128
           DCNLVHS G YGENLA+GSG F T   AV +WV EK  Y++ +NTCA G+VCGHYTQVVW
Sbjct: 73  DCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVW 132

Query: 129 RNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
           RNS+RVGCARV+C+NG + V+C+YDPPGN IGQ PY
Sbjct: 133 RNSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P04284|PR06_SOLLC Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum GN=PR1B1 PE=1 SV=2

 Score =  202 bits (514), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 97/164 (59%), Positives = 121/164 (73%), Gaps = 5/164 (3%)

Query: 1   MKMSSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYA 60
           M + +ISL L  C M  +  +  +  AQNSPQDYL  HN ARA V V  + W+  +A+ A
Sbjct: 1   MGLFNISLLLT-CLM--VLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRA 57

Query: 61  QNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVC 120
           QNY+NSR  DCNL+HSG   GENLAKG G FTG AAV LWV+E+ +YNY+TN C  GK C
Sbjct: 58  QNYANSRAGDCNLIHSGA--GENLAKGGGDFTGRAAVQLWVSERPSYNYATNQCVGGKKC 115

Query: 121 GHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
            HYTQVVWRNS+R+GC R +C+NGWWF++C+YDP GN+IGQ+PY
Sbjct: 116 RHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY 159

Probably involved in the defense reaction of plants against pathogens. Has antifungal activity.

Solanum lycopersicum (taxid: 4081)

>sp|P09042|PR1C_TOBAC Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3

 Score =  202 bits (514), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 104/165 (63%), Positives = 122/165 (73%), Gaps = 6/165 (3%)

Query: 2   KMSSISLALAICFMGSLALLIQTS-HAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYA 60
           +MSS  L   +     L L+I  S HAQNS QDYLDAHN+ARA V V  + W+D VAAYA
Sbjct: 8   QMSSFFLVSTLL----LFLIISHSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYA 63

Query: 61  QNYSNSRIADCNLVHSGGPYGENLAKGSGTF-TGTAAVSLWVAEKANYNYSTNTCAAGKV 119
           QNY++   ADCNLVHS G YGENLA GSG F T   AV +WV EK  Y + +NTCA G+V
Sbjct: 64  QNYASQLAADCNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQV 123

Query: 120 CGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
           CGHYTQVVWRNS+RVGCARVQC+NG + V+C+YDPPGN IG+ PY
Sbjct: 124 CGHYTQVVWRNSVRVGCARVQCNNGGYIVSCNYDPPGNVIGKSPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P11670|PRB1_TOBAC Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1

 Score =  201 bits (512), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 90/155 (58%), Positives = 119/155 (76%), Gaps = 2/155 (1%)

Query: 10  LAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIA 69
           +  CF+ + A+LI +S AQNSPQDYL+ HN+AR  V V  + W++ +AAYAQNY+N RI 
Sbjct: 7   IVACFI-TFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIG 65

Query: 70  DCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWR 129
           DC ++HS GPYGENLA          AV +WV EK  Y+Y++N+C  G VCGHYTQVVWR
Sbjct: 66  DCGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGG-VCGHYTQVVWR 124

Query: 130 NSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
           NS+R+GCARV+ +NGW+F+TC+YDPPGN+IGQ+P+
Sbjct: 125 NSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P08299|PR1A_TOBAC Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1

 Score =  201 bits (510), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 95/139 (68%), Positives = 112/139 (80%), Gaps = 1/139 (0%)

Query: 27  AQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAK 86
           AQNS QDYLDAHN+ARA V V  + W+D VAAYAQNY++   ADCNLVHS G YGENLA+
Sbjct: 30  AQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSHGQYGENLAE 89

Query: 87  GSGTF-TGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGW 145
           GSG F T   AV +WV EK  Y++ +NTCA G+VCGHYTQVVWRNS+RVGCARVQC+NG 
Sbjct: 90  GSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVQCNNGG 149

Query: 146 WFVTCSYDPPGNYIGQKPY 164
           + V+C+YDPPGNY G+ PY
Sbjct: 150 YVVSCNYDPPGNYRGESPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P33154|PR1_ARATH Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1

 Score =  188 bits (478), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 87/155 (56%), Positives = 115/155 (74%), Gaps = 2/155 (1%)

Query: 10  LAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIA 69
             I F+  +  L+  S AQ+SPQDYL  HN AR AV V  + W++ VAAYA++Y+     
Sbjct: 9   FLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRG 68

Query: 70  DCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWR 129
           +C L+HSGGPYGENLA GSG  +G +AV++WV+EKANYNY+ NTC    VCGHYTQVVWR
Sbjct: 69  NCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNG--VCGHYTQVVWR 126

Query: 130 NSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
            S+R+GCA+V+C+NG   ++C+YDP GNY+ +KPY
Sbjct: 127 KSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

Partially responsible for acquired pathogen resistance.

Arabidopsis thaliana (taxid: 3702)

>sp|Q08697|PR1A_SOLLC Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1

 Score =  181 bits (460), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 85/156 (54%), Positives = 111/156 (71%), Gaps = 5/156 (3%)

Query: 4   SSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNY 63
           SSI +A  I F     ++  +S AQ   +++L+AHN+AR  V V  + W+D +AAYAQNY
Sbjct: 3   SSIFVACFITF-----IIFHSSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNY 57

Query: 64  SNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHY 123
           +N R  DC ++HS GPYGENLA          AV +W  EK  Y+Y++NTCA GKVCGHY
Sbjct: 58  ANQRADDCGMIHSDGPYGENLAAAFPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHY 117

Query: 124 TQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYI 159
           TQVVWR S+R+GCARV+C++GW F+TC+YDPPGNYI
Sbjct: 118 TQVVWRKSVRLGCARVRCNSGWVFITCNYDPPGNYI 153

Probably involved in the defense reaction of plants against pathogens.

Solanum lycopersicum (taxid: 4081)

>sp|Q05968|PR1_HORVU Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1

 Score =  174 bits (440), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 86/146 (58%), Positives = 108/146 (73%), Gaps = 3/146 (2%)

Query: 22  IQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYG 81
           +  S AQNSPQDY+  HN+AR+AV V  + W+  + A+AQNY+N RI DC L HSGGPYG
Sbjct: 19  VNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYG 78

Query: 82  ENLAKGS--GTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARV 139
           EN+  GS    +  + AV+ WV+EK +Y+Y +NTCAAGKVCGHYTQVVWR S  +GCARV
Sbjct: 79  ENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGCARV 138

Query: 140 QCSNGWW-FVTCSYDPPGNYIGQKPY 164
            C+N    F+TC+Y+P GN IGQKPY
Sbjct: 139 VCNNNRGVFITCNYEPRGNIIGQKPY 164

Probably involved in the defense reaction of plants against pathogens.

Hordeum vulgare (taxid: 4513)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
225429135	161	PREDICTED: basic form of pathogenesis-re	0.981	1.0	0.707	8e-63
357476049	908	F-box/FBD/LRR-repeat protein [Medicago t	0.963	0.174	0.672	9e-63
307340555	161	pathogenesis-related protein 1 [Vitis hy	0.981	1.0	0.701	4e-61
255562126	164	STS14 protein precursor, putative [Ricin	0.993	0.993	0.696	2e-60
307340553	161	pathogenesis-related protein 1 [Vitis hy	0.981	1.0	0.689	3e-60
225429133	161	PREDICTED: basic form of pathogenesis-re	0.981	1.0	0.682	3e-60
224105787	153	predicted protein [Populus trichocarpa]	0.920	0.986	0.725	5e-60
225429250	161	PREDICTED: basic form of pathogenesis-re	0.981	1.0	0.689	1e-59
307340535	161	pathogenesis-related protein 1 [Vitis hy	0.859	0.875	0.760	1e-59
307340549	161	pathogenesis-related protein 1 [Vitis hy	0.981	1.0	0.695	1e-59

>gi|225429135|ref|XP_002274371.1| PREDICTED: basic form of pathogenesis-related protein 1 [Vitis vinifera] gi|147857567|emb|CAN80994.1| hypothetical protein VITISV_042545 [Vitis vinifera]

 Score =  244 bits (623), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 116/164 (70%), Positives = 137/164 (83%), Gaps = 3/164 (1%)

Query: 1   MKMSSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYA 60
           M +  IS+AL +  MG    L  T  AQNSPQDY+DAHN+ARA V V +I WNDTVAAYA
Sbjct: 1   MGLCKISMALLVGLMG--LALAHTCCAQNSPQDYVDAHNAARAQVGVGSITWNDTVAAYA 58

Query: 61  QNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVC 120
           QNY+N RI+DCNLVHSGGPYGENLAKGSG+ TGT AV+LWV EK  Y+Y++N+C  G+ C
Sbjct: 59  QNYANQRISDCNLVHSGGPYGENLAKGSGSLTGTDAVNLWVGEKPYYDYNSNSCVGGE-C 117

Query: 121 GHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
           GHYTQVVWRNS+R+GCARVQC+NGWWFVTC+YDPPGNY+GQ+PY
Sbjct: 118 GHYTQVVWRNSVRLGCARVQCNNGWWFVTCNYDPPGNYVGQRPY 161

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357476049|ref|XP_003608310.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355509365|gb|AES90507.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]

 Score =  244 bits (623), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 107/159 (67%), Positives = 129/159 (81%), Gaps = 1/159 (0%)

Query: 7   SLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNS 66
           + +L   F+  L+L    S+AQN PQD++DAHN+ARA V V NI W++TVA YA NY+NS
Sbjct: 6   TFSLFSLFLTILSLWFSFSNAQNLPQDFVDAHNTARAQVGVANITWDNTVATYALNYANS 65

Query: 67  RIADCNLVHSGGPYGENLAKGS-GTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQ 125
           R +DCNLVHS GPYGENLAKGS GTFTG  AV++WV EK  Y+Y+TN+C  G  C HYTQ
Sbjct: 66  RKSDCNLVHSNGPYGENLAKGSSGTFTGVTAVNMWVNEKQYYDYNTNSCINGGQCLHYTQ 125

Query: 126 VVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
           VVWRNS+R+GCARVQC+NGWWFVTC+YDPPGNY+GQKPY
Sbjct: 126 VVWRNSVRLGCARVQCTNGWWFVTCNYDPPGNYVGQKPY 164

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307340555|gb|ADN43439.1| pathogenesis-related protein 1 [Vitis hybrid cultivar]

 Score =  239 bits (609), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 115/164 (70%), Positives = 135/164 (82%), Gaps = 3/164 (1%)

Query: 1   MKMSSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYA 60
           M +  ISLAL +  MG    L  T  AQNS QDY+DAHN+ARA V V +I WNDTVAAYA
Sbjct: 1   MGLFKISLALLVGLMG--LALAHTCCAQNSAQDYVDAHNAARAQVGVGSITWNDTVAAYA 58

Query: 61  QNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVC 120
           QNY+N RI+DCNLVHSGG YGENLAKGS + TGT AV+LWV EK NY+Y++N+C  G+ C
Sbjct: 59  QNYANQRISDCNLVHSGGRYGENLAKGSPSLTGTDAVNLWVGEKPNYDYNSNSCVGGE-C 117

Query: 121 GHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
           GHYTQVVWRNS+R+GCARVQC+NGWWFVTC+YDPPGNY+GQ+PY
Sbjct: 118 GHYTQVVWRNSVRLGCARVQCNNGWWFVTCNYDPPGNYVGQRPY 161

Source: Vitis hybrid cultivar

Species: Vitis hybrid cultivar

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562126|ref|XP_002522071.1| STS14 protein precursor, putative [Ricinus communis] gi|223538670|gb|EEF40271.1| STS14 protein precursor, putative [Ricinus communis]

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 115/165 (69%), Positives = 132/165 (80%), Gaps = 2/165 (1%)

Query: 1   MKMSSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYA 60
           M    IS  L    MG LAL++   HAQNS QDYLDAHN+ARA V V NI+W++TVA YA
Sbjct: 1   MGSLKISQVLVSLLMG-LALVVHPCHAQNSQQDYLDAHNAARAQVGVANIVWDNTVATYA 59

Query: 61  QNYSNSRIADCNLVHSGGPYGENLAKGSGT-FTGTAAVSLWVAEKANYNYSTNTCAAGKV 119
           QNY+NSRI DCNLVHS G YGENLAKGS +  TGTAAV+LWVAEK  YNY++N+C  G+ 
Sbjct: 60  QNYANSRIGDCNLVHSSGSYGENLAKGSSSSLTGTAAVNLWVAEKPYYNYTSNSCTGGQQ 119

Query: 120 CGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
           C HYTQVVW  S+R+GCARVQC+NGWWFVTC+YDPPGNYIGQKPY
Sbjct: 120 CLHYTQVVWSKSVRLGCARVQCTNGWWFVTCNYDPPGNYIGQKPY 164

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307340553|gb|ADN43438.1| pathogenesis-related protein 1 [Vitis hybrid cultivar]

 Score =  236 bits (601), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 113/164 (68%), Positives = 133/164 (81%), Gaps = 3/164 (1%)

Query: 1   MKMSSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYA 60
           M +  ISLAL +  MG    L  T  AQNS QDY+DAHN+ARA V V +I WNDTVAAYA
Sbjct: 1   MGLFKISLALLVGLMG--LALAHTCRAQNSAQDYVDAHNAARARVGVGSITWNDTVAAYA 58

Query: 61  QNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVC 120
           QNY+N RI+DCNLVHSGG YGEN AKGS + TGT AV+LWV EK NY+Y++N+C  G+ C
Sbjct: 59  QNYANQRISDCNLVHSGGRYGENPAKGSPSLTGTDAVNLWVGEKPNYDYNSNSCVGGE-C 117

Query: 121 GHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
           GHYTQVVWRNS+R+GCAR QC+NGWWFVTC+YDPPGNY+GQ+PY
Sbjct: 118 GHYTQVVWRNSVRLGCARAQCNNGWWFVTCNYDPPGNYVGQRPY 161

Source: Vitis hybrid cultivar

Species: Vitis hybrid cultivar

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429133|ref|XP_002274307.1| PREDICTED: basic form of pathogenesis-related protein 1 [Vitis vinifera]

 Score =  236 bits (601), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 112/164 (68%), Positives = 134/164 (81%), Gaps = 3/164 (1%)

Query: 1   MKMSSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYA 60
           M +  ISL L +  MG    L     AQNSPQDY++AHN+ARA V V ++ WNDTVAAYA
Sbjct: 1   MGLCKISLPLLVGLMG--LALAHVCCAQNSPQDYVNAHNAARAQVGVGSMTWNDTVAAYA 58

Query: 61  QNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVC 120
           QNY+N RI+DCNLVHSGGPYGENLAKGSG+ TGT AV+LWV EK NY+Y++N+C  G+ C
Sbjct: 59  QNYANKRISDCNLVHSGGPYGENLAKGSGSLTGTDAVNLWVGEKPNYDYNSNSCVGGE-C 117

Query: 121 GHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
            HYTQVVW NS+R+GCARVQC+NGWWFVTC+YDPPGNY+GQ+PY
Sbjct: 118 LHYTQVVWSNSVRLGCARVQCNNGWWFVTCNYDPPGNYVGQRPY 161

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105787|ref|XP_002313932.1| predicted protein [Populus trichocarpa] gi|222850340|gb|EEE87887.1| predicted protein [Populus trichocarpa]

 Score =  235 bits (599), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 111/153 (72%), Positives = 135/153 (88%), Gaps = 2/153 (1%)

Query: 12  ICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADC 71
           + ++ SLAL    SHAQNS QDYL+AHN+AR+ V V NIIW++TVAAYA NY+NSRI+DC
Sbjct: 3   LVYLVSLAL-AHPSHAQNSQQDYLNAHNAARSQVTVANIIWDNTVAAYALNYANSRISDC 61

Query: 72  NLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNS 131
           NLVHS GPYGENLAKGSG+FTGTAAV+LWVAEK  Y+Y++N+C  G+ C HYTQVVWRNS
Sbjct: 62  NLVHSNGPYGENLAKGSGSFTGTAAVNLWVAEKPYYDYASNSCVGGQ-CLHYTQVVWRNS 120

Query: 132 IRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
           +RVGCARV+C+NGWWFV+C+YDPPGNYIG++PY
Sbjct: 121 VRVGCARVKCTNGWWFVSCNYDPPGNYIGERPY 153

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429250|ref|XP_002265050.1| PREDICTED: basic form of pathogenesis-related protein 1 [Vitis vinifera] gi|296088094|emb|CBI35453.3| unnamed protein product [Vitis vinifera]

 Score =  234 bits (596), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 113/164 (68%), Positives = 139/164 (84%), Gaps = 3/164 (1%)

Query: 1   MKMSSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYA 60
           M +  IS+ALA C +GS ALL+ TS+AQNS QDYL+AHN+ARA V V  + WN+TVAAYA
Sbjct: 1   MGLCKISVALA-CLIGS-ALLVHTSYAQNSQQDYLNAHNTARAQVSVGPMTWNNTVAAYA 58

Query: 61  QNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVC 120
           Q+Y+N +I DCNLVHS GPYGENLAKGSG+FTGTAAV+LWVAEK NY+Y++N+C  G+ C
Sbjct: 59  QSYANKQIGDCNLVHSNGPYGENLAKGSGSFTGTAAVNLWVAEKPNYDYNSNSCVGGE-C 117

Query: 121 GHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
            HYTQVVWRNS+ +GCAR QC+NGWW++ C+Y PPGNYIGQ+PY
Sbjct: 118 RHYTQVVWRNSVSLGCARAQCNNGWWYIICNYYPPGNYIGQRPY 161

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307340535|gb|ADN43429.1| pathogenesis-related protein 1 [Vitis hybrid cultivar]

 Score =  234 bits (596), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 108/142 (76%), Positives = 127/142 (89%), Gaps = 1/142 (0%)

Query: 23  QTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGE 82
            T  AQNSPQDY+DAHN+ARA V V +I WNDTVAAYAQNY+N RI+DCNLVHSGGPYGE
Sbjct: 21  HTCCAQNSPQDYVDAHNAARAQVGVGSITWNDTVAAYAQNYANQRISDCNLVHSGGPYGE 80

Query: 83  NLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCS 142
           NLAKGSG+ TGT AV+LWV EK+ Y+Y++N+C  G+ CGHYTQVVWRNS+R+GCARVQC+
Sbjct: 81  NLAKGSGSLTGTDAVNLWVGEKSYYDYNSNSCVGGE-CGHYTQVVWRNSVRLGCARVQCN 139

Query: 143 NGWWFVTCSYDPPGNYIGQKPY 164
           NGWWFVTC+YDPPGNY+GQ+PY
Sbjct: 140 NGWWFVTCNYDPPGNYVGQRPY 161

Source: Vitis hybrid cultivar

Species: Vitis hybrid cultivar

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307340549|gb|ADN43436.1| pathogenesis-related protein 1 [Vitis hybrid cultivar]

 Score =  234 bits (596), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 114/164 (69%), Positives = 132/164 (80%), Gaps = 3/164 (1%)

Query: 1   MKMSSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYA 60
           M +  ISLAL +  MG    L  T  AQNSPQDY+D HN+ARA V V  I WNDTVAAYA
Sbjct: 1   MGLFKISLALLVGLMG--FALAHTCCAQNSPQDYVDPHNAARAQVGVGPITWNDTVAAYA 58

Query: 61  QNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVC 120
           QNY+N RI DCNLVHSGGPYGEN+A GS + TGT AV+LWV EK NY+Y++N+C  GK C
Sbjct: 59  QNYANQRIGDCNLVHSGGPYGENIAWGSPSLTGTDAVNLWVGEKPNYDYNSNSCVGGK-C 117

Query: 121 GHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
           GHYTQVVWRNS+R+GCARVQC+NG WFVTC+YDPPGNY+GQ+PY
Sbjct: 118 GHYTQVVWRNSVRLGCARVQCNNGGWFVTCNYDPPGNYVGQRPY 161

Source: Vitis hybrid cultivar

Species: Vitis hybrid cultivar

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
TAIR|locus:2031055	161	AT1G50060 "AT1G50060" [Arabido	0.902	0.919	0.617	6.3e-53
TAIR|locus:2055240	161	PRB1 "AT2G14580" [Arabidopsis	0.981	1.0	0.573	8.5e-49
TAIR|locus:2064294	161	PR1 "AT2G14610" [Arabidopsis t	0.920	0.937	0.568	1.2e-47
TAIR|locus:2134178	163	AT4G33720 "AT4G33720" [Arabido	0.963	0.969	0.571	2e-47
TAIR|locus:2005537	176	PR-1-LIKE "AT2G19990" [Arabido	0.817	0.761	0.570	2.5e-42
TAIR|locus:2091196	161	AT3G19690 "AT3G19690" [Arabido	0.926	0.944	0.509	8.4e-42
TAIR|locus:2031060	226	AT1G50050 "AT1G50050" [Arabido	0.835	0.606	0.561	3.6e-41
TAIR|locus:2180662	166	AT5G26130 "AT5G26130" [Arabido	0.987	0.975	0.529	3.6e-41
TAIR|locus:2134283	166	AT4G33710 "AT4G33710" [Arabido	0.939	0.927	0.546	4.6e-41
TAIR|locus:2117547	210	AT4G25790 "AT4G25790" [Arabido	0.810	0.633	0.540	1.4e-39

TAIR|locus:2031055 AT1G50060 "AT1G50060" [Arabidopsis thaliana (taxid:3702)]

 Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
 Identities = 92/149 (61%), Positives = 122/149 (81%)

Query:    17 SLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHS 76
             +++ L+  ++AQN+PQDYL++HN+ARA V VPN++W+ T+AAYA NYSN R ADCNLVHS
Sbjct:    13 AISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHS 72

Query:    77 GGPYGENLAKGSGT-FTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVG 135
              GPYGENLAKGS + F+  +AV LWV EK  Y+Y+ N C  GK C HYTQVVWR+S+++G
Sbjct:    73 NGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVKIG 132

Query:   136 CARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
             CARVQC+N WWFV+C+Y+ PGN++G+ PY
Sbjct:   133 CARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2055240 PRB1 "AT2G14580" [Arabidopsis thaliana (taxid:3702)]

 Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
 Identities = 94/164 (57%), Positives = 119/164 (72%)

Query:     1 MKMSSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYA 60
             MK++S S  L I     +  L+    AQ+S QDY++AHN AR+ + V  + W++ +AAYA
Sbjct:     1 MKVTSYSRILII-LAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYA 59

Query:    61 QNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVC 120
             +NY+N    DC LVHS GPYGENLAK  G  +G AAV+LWV EKANYNY TNTC    VC
Sbjct:    60 RNYANQLKGDCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTCNG--VC 117

Query:   121 GHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
             GHYTQVVWRNS+R+GCA+V+C+NG   ++C+YDPPGNY  QKPY
Sbjct:   118 GHYTQVVWRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0009723 "response to ethylene stimulus" evidence=IEP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

TAIR|locus:2064294 PR1 "AT2G14610" [Arabidopsis thaliana (taxid:3702)]

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 87/153 (56%), Positives = 115/153 (75%)

Query:    12 ICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADC 71
             I F+  +  L+  S AQ+SPQDYL  HN AR AV V  + W++ VAAYA++Y+     +C
Sbjct:    11 IVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNC 70

Query:    72 NLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNS 131
              L+HSGGPYGENLA GSG  +G +AV++WV+EKANYNY+ NTC    VCGHYTQVVWR S
Sbjct:    71 RLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNG--VCGHYTQVVWRKS 128

Query:   132 IRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
             +R+GCA+V+C+NG   ++C+YDP GNY+ +KPY
Sbjct:   129 VRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0009627 "systemic acquired resistance" evidence=IEP;RCA

GO:0005618 "cell wall" evidence=IDA

GO:0010266 "response to vitamin B1" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0009414 "response to water deprivation" evidence=IEP

GO:0006952 "defense response" evidence=TAS

TAIR|locus:2134178 AT4G33720 "AT4G33720" [Arabidopsis thaliana (taxid:3702)]

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 92/161 (57%), Positives = 119/161 (73%)

Query:     4 SSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNY 63
             SS +L LAI F   L L++    AQ+SPQD+L  HN ARA V V  + W++ VAAYA+NY
Sbjct:     6 SSQNLFLAITFF--LVLIVHLK-AQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNY 62

Query:    64 SNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHY 123
             +N R  DC + HS G YGEN+A  SG+ TG AAV +WV E+ +Y+Y +NTCA  K CGHY
Sbjct:    63 ANQRKGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHY 122

Query:   124 TQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
             TQVVWRNS R+GCA+V+C+NG  F+TC+YDPPGN++G+ PY
Sbjct:   123 TQVVWRNSERLGCAKVRCNNGQTFITCNYDPPGNWVGEWPY 163

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2005537 PR-1-LIKE "AT2G19990" [Arabidopsis thaliana (taxid:3702)]

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 77/135 (57%), Positives = 99/135 (73%)

Query:    31 PQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSGT 90
             PQ+ L  HN ARA V V  ++WN+T+A YAQ+Y++ R  DC + HS GP+GENLA G GT
Sbjct:    42 PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAGWGT 101

Query:    91 FTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWW-FVT 149
              +G  A   W+ EK NY+Y +NTC    VCGHYTQ+VWR+S+R+GCA V+C N  + +V 
Sbjct:   102 MSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCKNDEYIWVI 161

Query:   150 CSYDPPGNYIGQKPY 164
             CSYDPPGNYIGQ+PY
Sbjct:   162 CSYDPPGNYIGQRPY 176

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0042742 "defense response to bacterium" evidence=IEP

TAIR|locus:2091196 AT3G19690 "AT3G19690" [Arabidopsis thaliana (taxid:3702)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 79/155 (50%), Positives = 110/155 (70%)

Query:    12 ICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADC 71
             I F+ ++AL    S A++  Q +L+AHN AR  V +  ++W+D VAAYA +Y+N RI DC
Sbjct:     8 ILFLLAIALFYG-SLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDC 66

Query:    72 NLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTC--AAGKVCGHYTQVVWR 129
              LVHS GP+GEN+A  SG  +   A  +W+ EK  Y+Y +NTC    G  C HYTQVVW+
Sbjct:    67 ALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWK 126

Query:   130 NSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
             N++R+GCA+V C++G  F+TC+YDPPGNYIG+KP+
Sbjct:   127 NTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2031060 AT1G50050 "AT1G50050" [Arabidopsis thaliana (taxid:3702)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 78/139 (56%), Positives = 103/139 (74%)

Query:    17 SLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHS 76
             +++ L+  ++AQN+ QDYL+ HN+ARA V V N++W+  VAAYA NY+N+R  DC+L  S
Sbjct:    13 AISFLVLATNAQNAQQDYLNTHNTARAQVGVANVVWDTVVAAYATNYANARKVDCSLTPS 72

Query:    77 -GGPYGENLAKGSGT-FTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRV 134
              GG YGENLA G+   FTG AAV+LWV EK  YNY+ N C   + C HYTQVVW NS+++
Sbjct:    73 TGGSYGENLANGNNALFTGVAAVNLWVNEKPYYNYTANACIGAQQCKHYTQVVWSNSVKI 132

Query:   135 GCARVQCSNGWWFVTCSYD 153
             GCARV C+NG +FV C+YD
Sbjct:   133 GCARVLCNNGGYFVGCNYD 151

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2180662 AT5G26130 "AT5G26130" [Arabidopsis thaliana (taxid:3702)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 89/168 (52%), Positives = 109/168 (64%)

Query:     1 MKM--SSISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAA 58
             MKM  S  +L L++  +  LA  +    AQ+ PQDYLD HN AR  V VP + W+     
Sbjct:     1 MKMFKSPQTLILSVIVL-FLAFAVPLK-AQDQPQDYLDEHNRARTQVGVPPMKWHAGAEQ 58

Query:    59 YAQNYSNSRIADCNLVHSG--GPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAA 116
             YA NY+  R  DC+L HS   G YGENLA   G  +G  AV LWV EK++Y Y++NTC+ 
Sbjct:    59 YAWNYAQQRKGDCSLTHSNSNGLYGENLAWSGGALSGAEAVKLWVNEKSDYIYASNTCSD 118

Query:   117 GKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
             GK CGHYTQVVWR S  VGCA+V+C NG  FVTC+Y PPGNY G+ PY
Sbjct:   119 GKQCGHYTQVVWRTSEWVGCAKVKCDNGGTFVTCNYYPPGNYRGRWPY 166

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2134283 AT4G33710 "AT4G33710" [Arabidopsis thaliana (taxid:3702)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 88/161 (54%), Positives = 107/161 (66%)

Query:     6 ISLALAICFMGSLALLIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSN 65
             + LALA+     LA  +    AQ+  QDYLD HN AR  V VP+I W+   A YA NY+ 
Sbjct:    11 VLLALALV----LAFAVPLK-AQDRRQDYLDVHNHARDDVSVPHIKWHAGAARYAWNYAQ 65

Query:    66 SRIADCNLVHSG--GPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHY 123
              R  DC L+HS   G YGENLA  SG  +G AAV LWV EK++Y + +NTC AGK CGHY
Sbjct:    66 RRKRDCRLIHSNSRGRYGENLAWSSGDMSGAAAVRLWVREKSDYFHKSNTCRAGKQCGHY 125

Query:   124 TQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
             TQVVW+NS  VGCA+V+C NG  FVTC+Y  PGN  G++PY
Sbjct:   126 TQVVWKNSEWVGCAKVKCDNGGTFVTCNYSHPGNVRGRRPY 166

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2117547 AT4G25790 "AT4G25790" [Arabidopsis thaliana (taxid:3702)]

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 73/135 (54%), Positives = 96/135 (71%)

Query:    32 QDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSGT- 90
             Q +LD HN+ R  + +P ++W+  +A+YA  ++N R  DC+L HS GPYGENL  GSG+ 
Sbjct:    76 QQFLDPHNTVRGGLGLPPLVWDVKIASYATWWANQRRYDCSLTHSTGPYGENLFWGSGSD 135

Query:    91 FTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWW-FVT 149
             FT T AV  W  E  +YN+ TNTC    +CGHYTQ+VWR + R+GCARV C NG   F+T
Sbjct:   136 FTSTFAVESWTVEAKSYNHMTNTCEGDGMCGHYTQIVWRETRRLGCARVVCENGAGVFIT 195

Query:   150 CSYDPPGNYIGQKPY 164
             C+YDPPGNY+G+KPY
Sbjct:   196 CNYDPPGNYVGEKPY 210

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P09042	PR1C_TOBAC	No assigned EC number	0.6303	0.9695	0.9464	N/A	no
P35792	PR12_HORVU	No assigned EC number	0.5890	0.8719	0.8719	N/A	no
Q00008	PRMS_MAIZE	No assigned EC number	0.5029	1.0	0.9820	N/A	no
Q08697	PR1A_SOLLC	No assigned EC number	0.5448	0.9207	0.8628	N/A	no
Q41359	PR1_SAMNI	No assigned EC number	0.6643	0.8780	0.8622	N/A	no
Q05968	PR1_HORVU	No assigned EC number	0.5890	0.8719	0.8719	N/A	no
Q04108	PR04_SOLLC	No assigned EC number	0.5853	0.9695	1.0	N/A	no
P08299	PR1A_TOBAC	No assigned EC number	0.6834	0.8414	0.8214	N/A	no
P04284	PR06_SOLLC	No assigned EC number	0.5914	0.9695	1.0	N/A	no
P35793	PR13_HORVU	No assigned EC number	0.5679	0.9390	0.9390	N/A	no
P07053	PR1B_TOBAC	No assigned EC number	0.6410	0.9207	0.8988	N/A	no
P11670	PRB1_TOBAC	No assigned EC number	0.5806	0.9329	0.8644	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00038584001 SubName- Full=Putative uncharacterized protein (Chromosome chr3 scaffold_95, whole genome shotgun sequence); (161 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	164
cd05381	136	cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like ex	2e-77
cd05384	129	cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like ex	1e-44
cd00168	122	cd00168, SCP, SCP: SCP-like extracellular protein	1e-39
smart00198	144	smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 fa	3e-37
cd05382	132	cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-lik	6e-31
cd05559	136	cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracel	1e-28
cd05380	144	cd05380, SCP_euk, SCP_euk: SCP-like extracellular	3e-26
cd05385	144	cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-l	1e-19
cd05383	138	cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellu	4e-16
pfam00188	121	pfam00188, CAP, Cysteine-rich secretory protein fa	4e-16
COG2340	207	COG2340, COG2340, Uncharacterized protein with SCP	1e-06

>gnl|CDD|240181 cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

 Score =  226 bits (578), Expect = 2e-77
 Identities = 92/136 (67%), Positives = 109/136 (80%), Gaps = 2/136 (1%)

Query: 31  PQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSGT 90
           PQD+LDAHN+ARAAV VP + W+DT+AAYAQ Y+N R  DC LVHS GPYGENL  GSG 
Sbjct: 1   PQDFLDAHNAARAAVGVPPLKWDDTLAAYAQRYANQRRGDCALVHSNGPYGENLFWGSGG 60

Query: 91  -FTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSN-GWWFV 148
            ++   AV+ WV+EK  Y+Y +NTCAAGK+CGHYTQVVWRN+ RVGCARV C N G  F+
Sbjct: 61  NWSAADAVASWVSEKKYYDYDSNTCAAGKMCGHYTQVVWRNTTRVGCARVTCDNGGGVFI 120

Query: 149 TCSYDPPGNYIGQKPY 164
            C+YDPPGNYIGQ+PY
Sbjct: 121 ICNYDPPGNYIGQRPY 136

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|240184 cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

 Score =  143 bits (362), Expect = 1e-44
 Identities = 62/130 (47%), Positives = 82/130 (63%), Gaps = 5/130 (3%)

Query: 32  QDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSGTF 91
              LDAHNS RA   V  + WN+T+A YAQ+Y+NS     NL HSGGPYGENLA  +G  
Sbjct: 4   SSILDAHNSKRALHGVQPLTWNNTLAEYAQDYANSYDCSGNLAHSGGPYGENLA--AGYP 61

Query: 92  TGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGW-WFVTC 150
           +GT+AV  W  E  +Y+Y  +     +  GH+TQ+VW+++ +VGCA   C   W W++ C
Sbjct: 62  SGTSAVDAWYDEIEDYDY--SNPGFSEATGHFTQLVWKSTTQVGCAYKDCGGAWGWYIVC 119

Query: 151 SYDPPGNYIG 160
            YDP GN IG
Sbjct: 120 EYDPAGNVIG 129

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune. Length = 129

>gnl|CDD|238097 cd00168, SCP, SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

 Score =  129 bits (327), Expect = 1e-39
 Identities = 50/128 (39%), Positives = 66/128 (51%), Gaps = 11/128 (8%)

Query: 31  PQDYLDAHNSARAAVY-VPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGP----YGENLA 85
            Q+ +  HNS RA V  +  + W+  +A  AQNY+N     C   HSG       GENLA
Sbjct: 1   AQEVVRLHNSYRAKVNGMLPMSWDAELAKTAQNYAN----RCIFKHSGEDGRGFVGENLA 56

Query: 86  KGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGW 145
            GS   TG AAV  W  E  NYN+           GHYTQVVW+N+ ++GC    C +  
Sbjct: 57  AGSYDMTGPAAVQAWYNEIKNYNFGQPGF--SSGTGHYTQVVWKNTTKIGCGVAFCGSNS 114

Query: 146 WFVTCSYD 153
           ++V C+Y 
Sbjct: 115 YYVVCNYG 122

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. Little is known about the biological roles of the bacterial and archaeal SCP domains. Length = 122

>gnl|CDD|214553 smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

 Score =  124 bits (314), Expect = 3e-37
 Identities = 54/148 (36%), Positives = 71/148 (47%), Gaps = 26/148 (17%)

Query: 29  NSPQDYLDAHNSARAAV-----------YVPNIIWNDTVAAYAQNYSNSRIADCNLVHSG 77
              Q+ LDAHN  R+ V            +  + W+  +A+ AQN++N     C   HS 
Sbjct: 1   AQQQEILDAHNKLRSQVAGGFLAAPAASNMLKLTWDCELASSAQNWANQ----CPFGHST 56

Query: 78  G--PYGENLAKGSGTF-----TGTAAVSLWVAEKANYNYSTNTCA-AGKVCGHYTQVVWR 129
               YGENLA  S +        +AAV LW  E  +Y YS+NTC       GHYTQVVW 
Sbjct: 57  PRPGYGENLAWWSSSTALPDTYASAAVQLWYDEFQDYGYSSNTCKDTNGKIGHYTQVVWA 116

Query: 130 NSIRVGCARVQCSNGWW---FVTCSYDP 154
            + +VGC    C +G      V C+YDP
Sbjct: 117 KTYKVGCGVANCPDGTKKKTVVVCNYDP 144

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function. Length = 144

>gnl|CDD|240182 cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

 Score =  108 bits (271), Expect = 6e-31
 Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 6/131 (4%)

Query: 32  QDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHS-GGPYGENLAKGSGT 90
           ++ LDAHN  RA    P +  +  +A  AQ ++    +   L HS    YGENLA  SG+
Sbjct: 4   KECLDAHNEYRALHGAPPLKLDKELAKEAQKWAEKLASSGKLQHSSPSGYGENLAYASGS 63

Query: 91  ---FTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWF 147
               TG  AV  W  E   Y+++          GH+TQVVW++S  +G    +   G  +
Sbjct: 64  GPDLTGEEAVDSWYNEIKKYDFNKP--GFSSKTGHFTQVVWKSSTELGVGVAKSKKGCVY 121

Query: 148 VTCSYDPPGNY 158
           V   Y P GN 
Sbjct: 122 VVARYRPAGNV 132

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms. Length = 132

>gnl|CDD|240186 cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

 Score =  102 bits (256), Expect = 1e-28
 Identities = 48/114 (42%), Positives = 63/114 (55%), Gaps = 6/114 (5%)

Query: 35  LDAHNSARAAVYVP-----NIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSG 89
           +D HN  R+ V  P      + W++ +AA A+ Y+   I D N        GENL   +G
Sbjct: 5   VDLHNQYRSQVSPPAANMLKMTWDEELAALAEAYARKCIWDHNPDRGHLRVGENLFISTG 64

Query: 90  -TFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCS 142
             F  T AV  W  EK +YNY+TNTCA  K+CGHYTQVVW N+ ++GC    C 
Sbjct: 65  PPFDATKAVEDWNNEKLDYNYNTNTCAPNKMCGHYTQVVWANTFKIGCGSYFCE 118

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|240180 cd05380, SCP_euk, SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

 Score = 96.4 bits (240), Expect = 3e-26
 Identities = 47/147 (31%), Positives = 65/147 (44%), Gaps = 29/147 (19%)

Query: 32  QDYLDAHNSAR------------AAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGP 79
           Q  LDAHN  R             A  +P + W+D +AA AQN++ +    C   HS   
Sbjct: 2   QAILDAHNELRSKVAKGTYSLLPPASNMPKLKWDDELAALAQNWAKT----CVFEHSPCR 57

Query: 80  ----YGENLAKGSGT-----FTGTAAVSLWVAEKANYNYSTN-TCAAGKVCGHYTQVVWR 129
                G+NLA GS T          AV+ W  E  +Y + +N T       GH+TQ+VW 
Sbjct: 58  NTGGVGQNLAAGSSTGSTVEELAEDAVNAWYNELKDYGFGSNPTNNFNSGIGHFTQMVWA 117

Query: 130 NSIRVGCARVQCSNGWW---FVTCSYD 153
            + +VGCA  +C         V C+Y 
Sbjct: 118 KTTKVGCAVARCGKDGGNKTVVVCNYS 144

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|240185 cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

 Score = 79.7 bits (197), Expect = 1e-19
 Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 22/129 (17%)

Query: 33  DYLDAHNSARAAVYVP-----NIIWNDTVAAYAQNYS-------NSRIADCNLVHSGGPY 80
           + +  HN  R+ V  P      + W+  +A  A+ ++       N  +      H   P 
Sbjct: 5   ECVRIHNELRSKVSPPAANMRYMTWDAALAKTARAWAKKCKFKHNIYLGKRYKCH---PK 61

Query: 81  ----GENLAKGS-GTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVG 135
               GEN+  GS   F+   AV+ W  E   Y++ TN+C+  +VCGHYTQVVW  S +VG
Sbjct: 62  FTSVGENIWLGSIYIFSPKNAVTSWYNEGKFYDFDTNSCS--RVCGHYTQVVWATSYKVG 119

Query: 136 CARVQCSNG 144
           CA   C N 
Sbjct: 120 CAVAFCPNL 128

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|240183 cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

 Score = 70.4 bits (173), Expect = 4e-16
 Identities = 44/136 (32%), Positives = 61/136 (44%), Gaps = 19/136 (13%)

Query: 35  LDAHNSARAAVYVP--NII---WNDTVAAYAQNYSNSRIADCNLVHS--------GGPYG 81
           +D HN  R +V     N++   WN+  A  A+ ++N+    CNL HS        G   G
Sbjct: 7   VDLHNELRRSVNPTASNMLKMEWNEEAAQNAKKWANT----CNLTHSPPNGRTIGGITCG 62

Query: 82  ENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQC 141
           EN+   S   + +  +  W  E  ++ Y       G V GHYTQ+VW  S  VGCA   C
Sbjct: 63  ENIFMSSYPRSWSDVIQAWYDEYKDFKYGVGATPPGAVVGHYTQIVWYKSYLVGCAVAYC 122

Query: 142 SNGWW--FVTCSYDPP 155
            N  +  F  C Y P 
Sbjct: 123 PNSKYKYFYVCHYCPA 138

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. One member, DE or CRISP-1, has been shown to mediate gamete fusion by binding to the egg surface; a sequence motif in the SCP domain plays a role in that binding. Length = 138

>gnl|CDD|215778 pfam00188, CAP, Cysteine-rich secretory protein family

 Score = 69.6 bits (170), Expect = 4e-16
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 9/124 (7%)

Query: 35  LDAHNSAR-AAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSGT--- 90
           L+ HN  R AA   P + W+ T+AA AQ+++     +    H    YGENLA  S     
Sbjct: 1   LNLHNELRSAAGGAPPLSWDPTLAAAAQDHAAYCADNGYFGHD---YGENLALVSVAGKA 57

Query: 91  -FTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNG-WWFV 148
              G AAV  W  E  +Y+ +    A     GH T ++W  S +VGCA  +C +G  ++V
Sbjct: 58  DDPGVAAVENWYDEAKDYDAAVGINAWMSSPGHRTNLLWPKSTKVGCAVAKCGDGSSYYV 117

Query: 149 TCSY 152
            C+Y
Sbjct: 118 VCNY 121

This is a large family of cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) that are found in a wide range of organisms, including prokaryotes and non-vertebrate eukaryotes, The nine subfamilies of the mammalian CAP 'super'family include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins. Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP 'super'family results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences. The Ca++-chelating function would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine from Heloderma horridum horridum blocks the Ca++ transporting ryanodine receptors. Length = 121

>gnl|CDD|225218 COG2340, COG2340, Uncharacterized protein with SCP/PR1 domains [Function unknown]

 Score = 46.4 bits (110), Expect = 1e-06
 Identities = 23/134 (17%), Positives = 37/134 (27%), Gaps = 15/134 (11%)

Query: 28  QNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKG 87
               +  +   N  RA   +P + WN T+A  A+N++     +    H+  P GE  A  
Sbjct: 78  AQFEKAVVAETNQERAKHGLPPLAWNATLAKAARNHARDMAKNGYFSHT-SPTGETPADR 136

Query: 88  SGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGW-W 146
                          E   Y  +                 W NS   G  +   +  +  
Sbjct: 137 ---LKKYGISGATAGENIAYGSNDP--------PEAAVDGWLNSP--GHRKNLLNPAYTE 183

Query: 147 FVTCSYDPPGNYIG 160
                     N  G
Sbjct: 184 IGVGVAYDASNRYG 197

Length = 207

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	164
cd05381	136	SCP_PR-1_like SCP_PR-1_like: SCP-like extracellula	100.0
cd05384	129	SCP_PRY1_like SCP_PRY1_like: SCP-like extracellula	100.0
cd05382	132	SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracel	100.0
cd05383	138	SCP_CRISP SCP_CRISP: SCP-like extracellular protei	100.0
smart00198	144	SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extra	100.0
cd05385	144	SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extrac	100.0
cd00168	122	SCP SCP: SCP-like extracellular protein domain, fo	100.0
cd05559	136	SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular prot	100.0
KOG3017	225	consensus Defense-related protein containing SCP d	100.0
cd05380	144	SCP_euk SCP_euk: SCP-like extracellular protein do	99.97
PF00188	124	CAP: Cysteine-rich secretory protein family; Inter	99.87
TIGR02909	127	spore_YkwD uncharacterized protein, YkwD family. M	99.8
cd05379	122	SCP_bacterial SCP_bacterial: SCP-like extracellula	99.65
COG2340	207	Uncharacterized protein with SCP/PR1 domains [Func	99.19

>cd05381 SCP_PR-1_like SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

Probab=100.00  E-value=1.2e-41  Score=236.60  Aligned_cols=133  Identities=68%  Similarity=1.260  Sum_probs=122.9

Q ss_pred             HHHHHHHHHHHhhCCCCCCCccHHHHHHHHHHHhhcccCCccccCCCCccceEEeecCC-CCHHHHHHHHHhccccCCCC
Q 048073           32 QDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSGT-FTGTAAVSLWVAEKANYNYS  110 (164)
Q Consensus        32 ~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~~~g~n~~~~~~~-~~~~~~v~~W~~e~~~~~~~  110 (164)
                      +.||+.||.+|+.++|++|+||++|++.|+.+|++|++.|...|+.+.+|||+++..+. ..+.++|+.|++|...|++.
T Consensus         2 ~~il~~hN~~R~~~~~~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~~~GeNi~~~~~~~~~~~~~v~~W~~e~~~y~~~   81 (136)
T cd05381           2 QDFLDAHNAARAAVGVPPLKWDDTLAAYAQRYANQRRGDCALVHSNGPYGENLFWGSGGNWSAADAVASWVSEKKYYDYD   81 (136)
T ss_pred             hHHHHHHHHHHHhcCCCcceECHHHHHHHHHHHHHhcCCCCcccCCCCCCceEEEecCCCCCHHHHHHHHHhccccCCCC
Confidence            68999999999999999999999999999999999999999988877799999977643 57889999999999999998


Q ss_pred             CCCCCCCcccchHHHHHHHhcCeeeEEEEEeCC-CCEEEEEEecCCCCCCCCCCC
Q 048073          111 TNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSN-GWWFVTCSYDPPGNYIGQKPY  164 (164)
Q Consensus       111 ~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~-~~~~~vC~Y~p~gn~~g~~~Y  164 (164)
                      .+.+..+..++||+||||+++++||||++.|.+ ++.++||+|+|+||+.|++||
T Consensus        82 ~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~vvC~Y~p~gn~~g~~~Y  136 (136)
T cd05381          82 SNTCAAGKMCGHYTQVVWRNTTRVGCARVTCDNGGGVFIICNYDPPGNYIGQRPY  136 (136)
T ss_pred             CCCcCCCccchHHHHHHHHhcCEeceEEEEeCCCCcEEEEEEeeCCCCCCCCCCC
Confidence            887777778999999999999999999999987 458999999999999999998

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05384 SCP_PRY1_like SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

Probab=100.00  E-value=1.9e-37  Score=213.70  Aligned_cols=128  Identities=48%  Similarity=0.902  Sum_probs=113.7

Q ss_pred             CchHHHHHHHHHHHhhCCCCCCCccHHHHHHHHHHHhhcccCCccccCCCCccceEEeecCCCCHHHHHHHHHhccccCC
Q 048073           29 NSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYN  108 (164)
Q Consensus        29 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~~~g~n~~~~~~~~~~~~~v~~W~~e~~~~~  108 (164)
                      +.++.||+.||.+|+.++|++|+||++|+..|+.||++|+..|...|+.+.+|||++...  .+++++|+.|++|...|+
T Consensus         1 ~~~~~iL~~hN~~R~~~g~~~L~w~~~La~~A~~~a~~c~~~~~~~~~~~~~geNi~~~~--~~~~~~v~~W~~e~~~y~   78 (129)
T cd05384           1 SFASSILDAHNSKRALHGVQPLTWNNTLAEYAQDYANSYDCSGNLAHSGGPYGENLAAGY--PSGTSAVDAWYDEIEDYD   78 (129)
T ss_pred             CHHHHHHHHHHHHHHHcCCCcCccCHHHHHHHHHHHHHhccCCceecCCCCCCcEEEEec--CCHHHHHHHHHhhhhhCC
Confidence            468999999999999999999999999999999999987777778888888999998765  368899999999999999


Q ss_pred             CCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCCC-CEEEEEEecCCCCCCC
Q 048073          109 YSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNG-WWFVTCSYDPPGNYIG  160 (164)
Q Consensus       109 ~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~-~~~~vC~Y~p~gn~~g  160 (164)
                      ++.+..  +..++||+||||+++++||||++.|... ..++||+|+|+||+.|
T Consensus        79 ~~~~~~--~~~~~h~tqmvw~~t~~vGCa~~~c~~~~~~~~vC~Y~p~Gn~~g  129 (129)
T cd05384          79 YSNPGF--SEATGHFTQLVWKSTTQVGCAYKDCGGAWGWYIVCEYDPAGNVIG  129 (129)
T ss_pred             CCCCCC--CCcccchhhhhhhccceeeeEEEEeCCCCeEEEEEEEECCCCCCc
Confidence            876433  3458999999999999999999999873 5889999999999875

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune.

>cd05382 SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

Probab=100.00  E-value=6.4e-37  Score=211.61  Aligned_cols=128  Identities=34%  Similarity=0.579  Sum_probs=113.8

Q ss_pred             CchHHHHHHHHHHHhhCCCCCCCccHHHHHHHHHHHhhcccCCccccCCC-CccceEEeecC---CCCHHHHHHHHHhcc
Q 048073           29 NSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGG-PYGENLAKGSG---TFTGTAAVSLWVAEK  104 (164)
Q Consensus        29 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~-~~g~n~~~~~~---~~~~~~~v~~W~~e~  104 (164)
                      ++++.||+.||.+|+.++|++|+||++|+..|+.||++|+..+.+.|+.+ .+|||++...+   +..++++|+.|++|.
T Consensus         1 ~~~~~iL~~hN~~R~~~g~~~L~wd~~La~~A~~~a~~c~~~~~~~h~~~~~~GeN~~~~~~~~~~~~~~~~v~~W~~e~   80 (132)
T cd05382           1 DFQKECLDAHNEYRALHGAPPLKLDKELAKEAQKWAEKLASSGKLQHSSPSGYGENLAYASGSGPDLTGEEAVDSWYNEI   80 (132)
T ss_pred             CHHHHHHHHHHHHHHHcCCCcCeeCHHHHHHHHHHHHHhhhcCceeCCCCCCCCceeEEecCCCCCCCHHHHHHHHHhcc
Confidence            46899999999999999999999999999999999998887777788765 59999998763   568899999999999


Q ss_pred             ccCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCCCCEEEEEEecCCCCC
Q 048073          105 ANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNY  158 (164)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~vC~Y~p~gn~  158 (164)
                      ..|++.....  +..++||+||||+++++||||++.|..+.+++||+|+|+||+
T Consensus        81 ~~y~~~~~~~--~~~~gh~tqmvw~~t~~vGCa~~~~~~~~~~~vC~Y~p~Gn~  132 (132)
T cd05382          81 KKYDFNKPGF--SSKTGHFTQVVWKSSTELGVGVAKSKKGCVYVVARYRPAGNV  132 (132)
T ss_pred             ccCCCCCCCC--CCCCCCeEEeEecCCCceeeEEEEcCCCCEEEEEEEeCCCCC
Confidence            9999874432  345899999999999999999999997778999999999985

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms.

>cd05383 SCP_CRISP SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

Probab=100.00  E-value=1.3e-34  Score=201.78  Aligned_cols=122  Identities=34%  Similarity=0.668  Sum_probs=107.9

Q ss_pred             chHHHHHHHHHHHhhCC-----CCCCCccHHHHHHHHHHHhhcccCCccccCCC--------CccceEEeecCCCCHHHH
Q 048073           30 SPQDYLDAHNSARAAVY-----VPNIIWNDTVAAYAQNYSNSRIADCNLVHSGG--------PYGENLAKGSGTFTGTAA   96 (164)
Q Consensus        30 ~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~--------~~g~n~~~~~~~~~~~~~   96 (164)
                      .++.||+.||.+|+.+.     |.+|+||++||..|+.||+    .|...|++.        .+|||++.......++++
T Consensus         2 ~~~~il~~HN~~R~~~~p~a~~M~~l~Wd~~La~~A~~~a~----~C~~~~~~~~~~~~~~~~~GeNl~~~~~~~~~~~a   77 (138)
T cd05383           2 VQKEIVDLHNELRRSVNPTASNMLKMEWNEEAAQNAKKWAN----TCNLTHSPPNGRTIGGITCGENIFMSSYPRSWSDV   77 (138)
T ss_pred             HHHHHHHHHHHHhccCCCCcccCcccEeCHHHHHHHHHHHh----cCCCcCCchhhcccCCCCcceeeeccCCCCCHHHH
Confidence            47899999999999983     8899999999999999999    588777642        479999987766688999


Q ss_pred             HHHHHhccccCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCCC--CEEEEEEecCC
Q 048073           97 VSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNG--WWFVTCSYDPP  155 (164)
Q Consensus        97 v~~W~~e~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~--~~~~vC~Y~p~  155 (164)
                      |+.|++|...|+++...+..+..++|||||||+++++||||++.|..+  ++++||+|+|+
T Consensus        78 v~~W~~e~~~y~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~vC~Y~P~  138 (138)
T cd05383          78 IQAWYDEYKDFKYGVGATPPGAVVGHYTQIVWYKSYLVGCAVAYCPNSKYKYFYVCHYCPA  138 (138)
T ss_pred             HHHHHHHHHhCCCCCCCCCCCCchhhHHHHHHHhccccceEEEECCCCCcCEEEEEecCCC
Confidence            999999999999988766667789999999999999999999999874  58899999994

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ t

>smart00198 SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

Probab=100.00  E-value=2.2e-34  Score=201.66  Aligned_cols=122  Identities=45%  Similarity=0.794  Sum_probs=108.9

Q ss_pred             chHHHHHHHHHHHhhCC-----------CCCCCccHHHHHHHHHHHhhcccCCccccCCC-CccceEEeecC-----CCC
Q 048073           30 SPQDYLDAHNSARAAVY-----------VPNIIWNDTVAAYAQNYSNSRIADCNLVHSGG-PYGENLAKGSG-----TFT   92 (164)
Q Consensus        30 ~~~~il~~hN~~R~~~~-----------m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~-~~g~n~~~~~~-----~~~   92 (164)
                      .|+.||+.||.+|+.++           |++|+||++||..|+.+|+    .|...|+.. .+|||++...+     ...
T Consensus         2 ~~~~iL~~HN~~R~~~a~G~~~~p~a~~m~~l~Wd~~La~~A~~~a~----~C~~~~~~~~~~GeNi~~~~~~~~~~~~~   77 (144)
T smart00198        2 QQQEILDAHNKLRSQVAKGLLANPAASNMLKLTWDCELASSAQNWAN----QCPFGHSTPRGYGENLAWWSSSTDLPITY   77 (144)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCcccccccccCCHHHHHHHHHHHH----hCCCcCCCcCCcCcceEEecccCcccchh
Confidence            58899999999999999           9999999999999999999    598888764 79999987653     357


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCC-CcccchHHHHHHHhcCeeeEEEEEeCCCC---EEEEEEecCC
Q 048073           93 GTAAVSLWVAEKANYNYSTNTCAA-GKVCGHYTQVVWRNSIRVGCARVQCSNGW---WFVTCSYDPP  155 (164)
Q Consensus        93 ~~~~v~~W~~e~~~~~~~~~~~~~-~~~~~~f~q~iw~~~~~vGCa~~~c~~~~---~~~vC~Y~p~  155 (164)
                      +.++|+.|++|...|++....+.. +..++||+||||+++++||||++.|.++.   .++||+|+|+
T Consensus        78 ~~~av~~W~~e~~~y~~~~~~~~~~~~~~~hftqmvw~~s~~vGCa~~~c~~~~~~~~~~vC~Y~P~  144 (144)
T smart00198       78 ASAAVQLWYDEFQDYGYSSNTCKDTNGKIGHYTQVVWAKTYKVGCGVSNCPDGTKKKTVVVCNYDPP  144 (144)
T ss_pred             HHHHHHHHHHHHHHcCCCCCccccCccchhHHHHHHHHhcCCcceEEEECCCCCcceEEEEEecCCC
Confidence            789999999999999998877665 56799999999999999999999999764   6899999994

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function.

>cd05385 SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

Probab=100.00  E-value=5.3e-34  Score=200.03  Aligned_cols=121  Identities=36%  Similarity=0.698  Sum_probs=104.0

Q ss_pred             CchHHHHHHHHHHHhhC-----CCCCCCccHHHHHHHHHHHhhcccCCccccCC------------CCccceEEeecC-C
Q 048073           29 NSPQDYLDAHNSARAAV-----YVPNIIWNDTVAAYAQNYSNSRIADCNLVHSG------------GPYGENLAKGSG-T   90 (164)
Q Consensus        29 ~~~~~il~~hN~~R~~~-----~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~------------~~~g~n~~~~~~-~   90 (164)
                      +++++||+.||++|+.+     .|++|+||++|+..||.||+    .|...|+.            ..+|||++.... .
T Consensus         1 ~f~~~~L~~HN~~R~~~~p~a~~m~~l~Wd~~La~~Aq~~a~----~C~~~~~~~~~~~~~~~~~~~~~GeNi~~~~~~~   76 (144)
T cd05385           1 EFIDECVRIHNELRSKVSPPAANMRYMTWDAALAKTARAWAK----KCKFKHNIYLGKRYKCHPKFTSVGENIWLGSIYI   76 (144)
T ss_pred             CHHHHHHHHHHHHHhhCCCCcccCcccccCHHHHHHHHHHHh----cCCCCCCchhhcccccccccCcccceeeecccCC
Confidence            46899999999999999     59999999999999999999    58766543            258999987653 3


Q ss_pred             CCHHHHHHHHHhccccCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCCCC-----EEEEEEecCC
Q 048073           91 FTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGW-----WFVTCSYDPP  155 (164)
Q Consensus        91 ~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~-----~~~vC~Y~p~  155 (164)
                      ..+.++++.|++|...|+|..+.+.  ..++||+||||+++++||||++.|++++     .++||+|+|+
T Consensus        77 ~~~~~av~~W~~e~~~y~~~~~~~~--~~~ghftqmvw~~t~~vGCa~~~c~~~~~~~~~~~vVC~Y~p~  144 (144)
T cd05385          77 FSPKNAVTSWYNEGKFYDFDTNSCS--RVCGHYTQVVWATSYKVGCAVAFCPNLGGIPNAAIFVCNYAPA  144 (144)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCCCC--CcccCHHHHHHhhccccceEEEECCCCCCccccEEEEEeCCCC
Confidence            5789999999999999998876554  3599999999999999999999998742     6899999994

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd00168 SCP SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

Probab=100.00  E-value=1.4e-32  Score=187.57  Aligned_cols=117  Identities=43%  Similarity=0.752  Sum_probs=103.9

Q ss_pred             hHHHHHHHHHHHhhC-CCCCCCccHHHHHHHHHHHhhcccCCccccCCC----CccceEEeecCCCCHHHHHHHHHhccc
Q 048073           31 PQDYLDAHNSARAAV-YVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGG----PYGENLAKGSGTFTGTAAVSLWVAEKA  105 (164)
Q Consensus        31 ~~~il~~hN~~R~~~-~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~----~~g~n~~~~~~~~~~~~~v~~W~~e~~  105 (164)
                      +++||+.||.+|+.+ +|++|+||++|+..|+.+|+    .|...|++.    .+|||++...+..+++++++.|++|..
T Consensus         1 ~~~il~~hN~~R~~~a~~~~L~wd~~La~~A~~~a~----~c~~~h~~~~~~~~~geNi~~~~~~~~~~~~v~~W~~e~~   76 (122)
T cd00168           1 AQEVVRLHNSYRAKVNGMLPMSWDAELAKTAQNYAN----RCIFKHSGEDGRGFVGENLAAGSYDMTGPAAVQAWYNEIK   76 (122)
T ss_pred             CcHHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHHh----hccccCCCcccCCCCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            368999999999999 99999999999999999999    588877663    589999988755689999999999999


Q ss_pred             cCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCCCCEEEEEEec
Q 048073          106 NYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYD  153 (164)
Q Consensus       106 ~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~vC~Y~  153 (164)
                      .|+|....  .+..++||+||||+++++||||++.|++++.++||+|+
T Consensus        77 ~y~~~~~~--~~~~~~h~~qmvw~~s~~vGca~~~~~~~~~~~vC~Y~  122 (122)
T cd00168          77 NYNFGQPG--FSSGTGHYTQVVWKNTTKIGCGVAFCGSNSYYVVCNYG  122 (122)
T ss_pred             hCCCCCCC--CCCCccchhhhhcccCCeeeeEEEEcCCCCEEEEEeCc
Confidence            99988543  34558999999999999999999999977799999995

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as

>cd05559 SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

Probab=100.00  E-value=9.9e-33  Score=191.86  Aligned_cols=119  Identities=40%  Similarity=0.785  Sum_probs=104.8

Q ss_pred             hHHHHHHHHHHHhhCC-----CCCCCccHHHHHHHHHHHhhcccCCccccCCC----CccceEEeecC-CCCHHHHHHHH
Q 048073           31 PQDYLDAHNSARAAVY-----VPNIIWNDTVAAYAQNYSNSRIADCNLVHSGG----PYGENLAKGSG-TFTGTAAVSLW  100 (164)
Q Consensus        31 ~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~----~~g~n~~~~~~-~~~~~~~v~~W  100 (164)
                      |+.||+.||.+|+.++     |.+|+||++||..|+.||+    +|...|++.    .+|||++...+ ...+.++++.|
T Consensus         1 r~~il~~HN~~R~~~~p~a~~m~~L~Wd~~La~~A~~~a~----~C~~~~~~~~~~~~~GeNl~~~~~~~~~~~~~v~~W   76 (136)
T cd05559           1 RLNLVDLHNQYRSQVSPPAANMLKMTWDEELAALAEAYAR----KCIWDHNPDRGHLRVGENLFISTGPPFDATKAVEDW   76 (136)
T ss_pred             CcHHHHHHHHHHhhCCCccccCcccccCHHHHHHHHHHHH----hccccCCCcccCCCceeeeeecCCCCCCHHHHHHHH
Confidence            5789999999999984     8899999999999999999    588877652    69999987764 35789999999


Q ss_pred             HhccccCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCCC-------CEEEEEEec
Q 048073          101 VAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNG-------WWFVTCSYD  153 (164)
Q Consensus       101 ~~e~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~-------~~~~vC~Y~  153 (164)
                      ++|...|+++.+.+..+..++||+||||+++++||||++.|.++       ..++||+|+
T Consensus        77 ~~e~~~y~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~~~~~~vC~Y~  136 (136)
T cd05559          77 NNEKLDYNYNTNTCAPNKMCGHYTQVVWANTFKIGCGSYFCETLEVLRWENATLLVCNYG  136 (136)
T ss_pred             HHHHHhcCCCCCCCCCCCcccchHHHHHhccCccceEEEECCCCCCCCcccCEEEEecCC
Confidence            99999999988877777789999999999999999999999752       378999995

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>KOG3017 consensus Defense-related protein containing SCP domain [Function unknown]

Probab=100.00  E-value=4.2e-33  Score=208.64  Aligned_cols=132  Identities=48%  Similarity=0.898  Sum_probs=115.4

Q ss_pred             CchHHHHHHHHHHHhhCC-----CCCCCccHHHHHHHHHHHhhcccCCccccC------CCCccceEEeecCC-------
Q 048073           29 NSPQDYLDAHNSARAAVY-----VPNIIWNDTVAAYAQNYSNSRIADCNLVHS------GGPYGENLAKGSGT-------   90 (164)
Q Consensus        29 ~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~------~~~~g~n~~~~~~~-------   90 (164)
                      +.+++|++.||.+|..+.     |++|+||++||..||.||++    |...|+      .+.+|||++++.+.       
T Consensus        40 ~~~~~~~~~hn~~r~~~~~~as~m~~m~Wd~~La~~Aq~~a~~----c~~~~~~~~~~~~~~~GeNl~~~~~~~~~~~~~  115 (225)
T KOG3017|consen   40 NLRSEILNGHNVARGAVGPPASNMMKLKWDDELAALAQNWANT----CPFGHDKCVHTSFGPYGENLAWGWSSNPPLSLD  115 (225)
T ss_pred             HHHHHHHhhhHHhcCccCCchHhCccccCCHHHHHHHHHHHhh----CCcccCccccccCCCCcccceeeccCCCCcccc
Confidence            688999999999999998     99999999999999999995    776655      35679999987753       


Q ss_pred             CCHHHHHHHHHhccccCCCCCCCCCC---CcccchHHHHHHHhcCeeeEEEEEeCCC-----CEEEEEEecCCCCCCC-C
Q 048073           91 FTGTAAVSLWVAEKANYNYSTNTCAA---GKVCGHYTQVVWRNSIRVGCARVQCSNG-----WWFVTCSYDPPGNYIG-Q  161 (164)
Q Consensus        91 ~~~~~~v~~W~~e~~~~~~~~~~~~~---~~~~~~f~q~iw~~~~~vGCa~~~c~~~-----~~~~vC~Y~p~gn~~g-~  161 (164)
                      .....+++.|+.|...|++..+.+..   ++.++|||||||+++++||||++.|.++     ..++||+|+|+||+.+ +
T Consensus       116 ~~~~~a~~~w~~e~~~~~~~~~~~~~~~~~~~~gHyTQ~vw~~s~~vGCgv~~c~~~~~~~~~~~~vC~Y~p~g~~~~~~  195 (225)
T KOG3017|consen  116 TSGALAVEAWESEFQEYDWSSNTCSSADFGEGIGHYTQMVWAKSTKVGCGVVRCGNGSNGYNTVAVVCNYDPPGNNINGE  195 (225)
T ss_pred             ccHHHHHHHHHHHHHHccCcccccCcccCCCcceEEEEEEEeCCceeceeeccCCCCCCCcceEEEEEEeecCCCCcCCC
Confidence            46678999999999999999988876   7789999999999999999999999987     5799999999955555 5


Q ss_pred             CCC
Q 048073          162 KPY  164 (164)
Q Consensus       162 ~~Y  164 (164)
                      .+|
T Consensus       196 ~~y  198 (225)
T KOG3017|consen  196 IPY  198 (225)
T ss_pred             CcC
Confidence            665

>cd05380 SCP_euk SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

Probab=99.97  E-value=1.6e-31  Score=186.55  Aligned_cols=119  Identities=39%  Similarity=0.706  Sum_probs=103.8

Q ss_pred             hHHHHHHHHHHHhhC------------CCCCCCccHHHHHHHHHHHhhcccCCccccCCC----CccceEEeecCC----
Q 048073           31 PQDYLDAHNSARAAV------------YVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGG----PYGENLAKGSGT----   90 (164)
Q Consensus        31 ~~~il~~hN~~R~~~------------~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~----~~g~n~~~~~~~----   90 (164)
                      ++.||+.||.+|+.+            +|++|+||++||..|+.+|+    .|...|+..    .+|||++.....    
T Consensus         1 ~~~il~~HN~~R~~~a~g~~~~~p~a~~m~~l~Wd~~La~~A~~~a~----~C~~~~~~~~~~~~~GeNl~~~~~~~~~~   76 (144)
T cd05380           1 RQAILDAHNELRSKVAKGTYSLLPPASNMPKLKWDDELAALAQNWAK----TCVFEHSPCRNTGGVGQNLAAGSSTGSTV   76 (144)
T ss_pred             CcHHHHHHHHHHHHhhcCCCCCCCchhcCCcceeCHHHHHHHHHHHh----cCCCcCCcccCCCCCCcEEEEeccCCCCH
Confidence            478999999999999            79999999999999999999    587777653    689999987643    


Q ss_pred             -CCHHHHHHHHHhccccCCCCCC-CCCCCcccchHHHHHHHhcCeeeEEEEEeCC---CCEEEEEEec
Q 048073           91 -FTGTAAVSLWVAEKANYNYSTN-TCAAGKVCGHYTQVVWRNSIRVGCARVQCSN---GWWFVTCSYD  153 (164)
Q Consensus        91 -~~~~~~v~~W~~e~~~~~~~~~-~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~---~~~~~vC~Y~  153 (164)
                       ..+.++|+.|++|...|++... ....+..++||+||||+++++||||++.|..   .+.++||+|+
T Consensus        77 ~~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~~~~~~~~~~~~vC~Y~  144 (144)
T cd05380          77 EELAEDAVNAWYNELKDYGFGSNPTNNFNSGIGHFTQMVWAKTTKVGCAVARCGKDGGNKTVVVCNYS  144 (144)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcCcccccccchhHHHHHHHHhcCccceEEEEeecCCceEEEEEecCC
Confidence             3678999999999999998875 3455677999999999999999999999985   3599999995

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>PF00188 CAP: Cysteine-rich secretory protein family; InterPro: IPR014044 The cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) superfamily proteins are found in a wide range of organisms, including prokaryotes [] and non-vertebrate eukaryotes [], The nine subfamilies of the mammalian CAP superfamily include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins

Probab=99.87  E-value=8.5e-22  Score=131.71  Aligned_cols=114  Identities=34%  Similarity=0.573  Sum_probs=83.1

Q ss_pred             HHHHHHHH-hhCCCCCCCccHHHHHHHHHHHhhcccCCccccCC-CCccceEEeecCCCCHHHH----HHHHHhccccCC
Q 048073           35 LDAHNSAR-AAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSG-GPYGENLAKGSGTFTGTAA----VSLWVAEKANYN  108 (164)
Q Consensus        35 l~~hN~~R-~~~~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~-~~~g~n~~~~~~~~~~~~~----v~~W~~e~~~~~  108 (164)
                      |+.||.+| ...++++|+||++|+..|+.+|+.    |...+.. ...|++.............    ++.|+.+...+.
T Consensus         1 L~~~N~~R~~~~~~~~L~~d~~L~~~A~~~a~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (124)
T PF00188_consen    1 LDLHNEYRSAANGLPPLKWDPELAKAAQAHAKY----CANSNSLSHDSGENGSQSSRFGSYSDAQVTAVENWYSESKNYN   76 (124)
T ss_dssp             HHHHHHHHHBSSTBB--EE-HHHHHHHHHHHTT----TCSSEETTEESEEEEEEESSTTSHHHHHHHHHHHHHGGGGGEE
T ss_pred             CHHHHHHHHHhCCCCCCeeCHHHHHHHHHhhHH----hhhhcccccccCCCCccccccccccchhhHHHHHHHhcccccc
Confidence            78999999 888888899999999999999995    6553322 2457777766643333222    899999999887


Q ss_pred             CCC--CCCCCCcccchHHHHHHHhcCeeeEEEEEeCCCC--EEEEEEe
Q 048073          109 YST--NTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGW--WFVTCSY  152 (164)
Q Consensus       109 ~~~--~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~--~~~vC~Y  152 (164)
                      ...  ....-....+||+||+|+.+++||||++.|..++  .++||.|
T Consensus        77 ~~~~~~~~~~~~~~~h~~~ll~~~~~~iGca~~~~~~~~~~~~~vc~y  124 (124)
T PF00188_consen   77 FQNQSIFNSWMNSPGHFTNLLWPNTTRIGCAVANCPNGKNNYYWVCNY  124 (124)
T ss_dssp             TTCSTEESSTTSTCHHHHHHT-TT--EEEEEEEEETTSSSEEEEEEEE
T ss_pred             cccchhhhccCCchhhhhhhhcCCCCEEEEEEEEeCCCCeeEEEEEEC
Confidence            662  1122234589999999999999999999999876  9999998

Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP superfamily results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences []. The Ca++-chelating function [] would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how Q91055 from SWISSPROT blocks the Ca++ transporting ryanodine receptors. This entry represents the CAP domain common to all members of the CAP superfamily. The CAP domain forms a unique 3 layer alpha-beta-alpha fold with some, though not all, of the structural elements found in proteases [].; PDB: 3U3N_C 3U3U_C 3U3L_C 1U53_A 1RC9_A 1SMB_A 3NT8_B 1QNX_A 1WVR_A 3Q2U_A ....

>TIGR02909 spore_YkwD uncharacterized protein, YkwD family

Probab=99.80  E-value=7.5e-19  Score=120.68  Aligned_cols=107  Identities=20%  Similarity=0.223  Sum_probs=92.1

Q ss_pred             CchHHHHHHHHHHHhhCCCCCCCccHHHHHHHHHHHhhcccCCccccCCC-----------------CccceEEeecCCC
Q 048073           29 NSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGG-----------------PYGENLAKGSGTF   91 (164)
Q Consensus        29 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~-----------------~~g~n~~~~~~~~   91 (164)
                      +.++++++.||.+|..++++||+||+.|++.|+.||+.|+..+.+.|..+                 .+|||++.+.  .
T Consensus         3 ~~e~~~l~~iN~~R~~~Gl~pL~~~~~L~~~A~~hA~~ma~~~~~~H~~~~~~~~~~r~~~~g~~~~~~gENi~~g~--~   80 (127)
T TIGR02909         3 AEEKRVVELVNAERAKNGLKPLKADPELSKVARLKSEDMRDKNYFSHTSPTYGSPFDMMKKFGISYRMAGENIAYGN--S   80 (127)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHHhCCcccccCCCCCCHHHHHHHcCCCcccceeeeeccC--C
Confidence            35789999999999999999999999999999999999998888877641                 3489998654  4


Q ss_pred             CHHHHHHHHHhccccCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCCCCEEEEEEec
Q 048073           92 TGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYD  153 (164)
Q Consensus        92 ~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~vC~Y~  153 (164)
                      +++.+++.|+++.                +|+++|+|++.+.+|||++.+.+++.|+|-.|.
T Consensus        81 ~~~~~v~~W~~S~----------------gH~~nil~~~~~~~Gvg~~~~~~g~~y~~q~F~  126 (127)
T TIGR02909        81 TVEAVHNAWMNSP----------------GHRANILNPNYTEIGVGYVEGGSGGIYWTQMFI  126 (127)
T ss_pred             CHHHHHHHHHcCH----------------hHHHHHcCCCcCeEeEEEEeCCCCCeEEEEEec
Confidence            6889999998753                699999999999999999999887777776653

Members of this protein family represent a subset of those belonging to Pfam family pfam00188 (SCP-like extracellular protein). Based on currently cuttoffs for this model, all member proteins are found in Bacteria capable of endospore formation. Members include a named but uncharacterized protein, YkwD of Bacillus subtilis. Only the C-terminal region is well-conserved and is included in the seed alignment for this model. Three members of this family have an N-terminal domain homologous to the spore coat assembly protein SafA.

>cd05379 SCP_bacterial SCP_bacterial: SCP-like extracellular protein domain, as found in bacteria and archaea

Probab=99.65  E-value=1.6e-15  Score=102.54  Aligned_cols=103  Identities=28%  Similarity=0.413  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHHhhCCCCCCCccHHHHHHHHHHHhhcccCCccccCCC-C----------------ccceEEeecCCCCHH
Q 048073           32 QDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGG-P----------------YGENLAKGSGTFTGT   94 (164)
Q Consensus        32 ~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~-~----------------~g~n~~~~~~~~~~~   94 (164)
                      +.+++.+|.+|..++++||+||.+|+..|+.++..++......|... .                +|||++....  ...
T Consensus         2 ~~~~~~iN~~R~~~gl~pl~~~~~l~~~A~~~a~~~~~~~~~~h~~~~~~~~~~~~~~~g~~~~~~~eni~~~~~--~~~   79 (122)
T cd05379           2 QEALELINAYRAQNGLPPLTWDPALAAAAQAHARDMAANGYFSHTGPDGSSPFDRARAAGYPYSSAGENIAYGYS--TAE   79 (122)
T ss_pred             hHHHHHHHHHHHHcCCCCCccChHHHHHHHHHHHHHHhcCccCCcCCCCCCHHHHHHHcCCCcCccchhhcccCC--CHH
Confidence            57899999999999999999999999999999999987666666541 1                3888876652  689


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCCCCEEEEEEe
Q 048073           95 AAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSY  152 (164)
Q Consensus        95 ~~v~~W~~e~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~vC~Y  152 (164)
                      ++++.|+++                .+|+.+|+++..+++|||+....++..++|..|
T Consensus        80 ~~~~~w~~~----------------~~H~~~ll~~~~~~~Gvg~~~~~~~~~y~~~~f  121 (122)
T cd05379          80 AAVDGWMNS----------------PGHRANILNPDYTEVGVGVAYGGDGGYYWVQVF  121 (122)
T ss_pred             HHHHHHhCC----------------HhHHHHHcCCCcceeeEEEEeCCCCCeEEEEec
Confidence            999999876                369999999999999999999987767777665

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Little is known about the biological roles of the bacterial and archaeal SCP domains.

>COG2340 Uncharacterized protein with SCP/PR1 domains [Function unknown]

Probab=99.19  E-value=9.8e-11  Score=86.74  Aligned_cols=100  Identities=24%  Similarity=0.324  Sum_probs=85.3

Q ss_pred             CCCchHHHHHHHHHHHhhCCCCCCCccHHHHHHHHHHHhhcccCCccccCCC-----------------CccceEEeecC
Q 048073           27 AQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGG-----------------PYGENLAKGSG   89 (164)
Q Consensus        27 ~~~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~-----------------~~g~n~~~~~~   89 (164)
                      .+++...+++.+|.+|..+++++|+||.+|+..|+.++..|+++..+.|..+                 .+|||++.+..
T Consensus        77 ~~~~~~~~~~~~N~~R~~~~l~~L~~n~~L~~~A~~~a~~m~~~g~~sH~~~~g~~~~~r~~~~g~~~~~agENIa~g~~  156 (207)
T COG2340          77 LAQFEKAVVAETNQERAKHGLPPLAWNATLAKAARNHARDMAKNGYFSHTSPTGETPADRLKKYGISGATAGENIAYGSN  156 (207)
T ss_pred             cchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHHHHHcCCccccCCCCCCHHHHHHhCCcccccccceeecCCC
Confidence            4577888999999999999999999999999999999999999888887651                 36999988763


Q ss_pred             CCCHHHHHHHHHhccccCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCC
Q 048073           90 TFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSN  143 (164)
Q Consensus        90 ~~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~  143 (164)
                      +. .+.+|+.|++..                +|-.+|+.+.-+.+|.|+..-..
T Consensus       157 ~~-~~~~v~~Wl~S~----------------gH~~nll~~~~~~~Gv~~~~~~~  193 (207)
T COG2340         157 DP-PEAAVDGWLNSP----------------GHRKNLLNPAYTEIGVGVAYDAS  193 (207)
T ss_pred             Cc-hHHHHHHhcCCh----------------hhhhhccCcchhheeEEEEecCC
Confidence            22 279999998776                68899999999999999987654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	164
1cfe_A	135	P14a, Nmr, 20 Structures Length = 135		7e-50
1smb_A	154	Crystal Structure Of Golgi-Associated Pr-1 Protein		2e-13
4aiw_A	154	Gapr-1 With Bound Inositol Hexakisphosphate Length		5e-13
2dda_A	211	Crystal Structure Of Pseudechetoxin From Pseudechis		5e-13
1xta_A	221	Crystal Structure Of Natrin, A Snake Venom Crisp Fr		2e-12
1xx5_A	221	Crystal Structure Of Natrin From Naja Atra Snake Ve		4e-12
3q2r_A	205	Crystal Structure Of Sglipr1 Soaked With Zinc Chlor		9e-12
2ddb_A	210	Crystal Structure Of Pseudecin From Pseudechis Porp		9e-12
1wvr_A	221	Crystal Structure Of A Crisp Family Ca-Channel Bloc		6e-09
1rc9_A	221	Crystal Structure Of Stecrisp, A Member Of Crisp Fa		1e-08
1qnx_A	209	Ves V 5, An Allergen From Vespula Vulgaris Venom Le		2e-08
2vzn_A	218	Crystal Structure Of The Major Allergen From Fire A		2e-08
1u53_A	196	Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein F		1e-07
3nt8_A	424	Crystal Structure Of Na-Asp-1 Length = 424		2e-05

>pdb|1CFE|A Chain A, P14a, Nmr, 20 Structures Length = 135

Iteration: 1
 Score =  192 bits (488), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 107/136 (78%), Gaps = 2/136 (1%)
Query: 28  QNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKG 87
           QNSPQDYL  HN ARA V V  + W+  +A+ AQNY+NSR  DCNL+HSG   GENLAKG
Sbjct: 1   QNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAKG 58
Query: 88  SGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWF 147
            G FTG AAV LWV+E+ +YNY+TN C  GK C HYTQVVWRNS+R+GC R +C+NGWWF
Sbjct: 59  GGDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWF 118
Query: 148 VTCSYDPPGNYIGQKP 163
           ++C+YDP GN+IGQ+P
Sbjct: 119 ISCNYDPVGNWIGQRP 134

>pdb|1SMB|A Chain A, Crystal Structure Of Golgi-Associated Pr-1 Protein Length = 154

Iteration: 1
 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Query: 33  DYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSN----SRIADCNLVHSGGPYGENLAKGS 88
           + L AHN  R    VP +     +   AQ YS     +RI   +   S G  GENLA  S
Sbjct: 12  EVLKAHNEYRQKHGVPPLKLXKNLNREAQQYSEALASTRILKHSPESSRGQXGENLAWAS 71
Query: 89  GTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFV 148
              TG      W +E  NYN+      +G   GH+T +VW+N+ ++G  +   S+G  FV
Sbjct: 72  YDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASASDGSSFV 129
Query: 149 TCSYDPPGNYIGQ 161
              Y P GN + +
Sbjct: 130 VARYFPAGNVVNE 142

>pdb|4AIW|A Chain A, Gapr-1 With Bound Inositol Hexakisphosphate Length = 154

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Query: 33  DYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSN----SRIADCNLVHSGGPYGENLAKGS 88
           + L AHN  R    VP +     +   AQ YS     +RI   +   S G  GENLA  S
Sbjct: 12  EVLKAHNEYRQKHGVPPLKLXKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS 71
Query: 89  GTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFV 148
              TG      W +E  NYN+      +G   GH+T +VW+N+ ++G  +   S+G  FV
Sbjct: 72  YDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASASDGSSFV 129
Query: 149 TCSYDPPGNYIGQ 161
              Y P GN + +
Sbjct: 130 VARYFPAGNVVNE 142

>pdb|2DDA|A Chain A, Crystal Structure Of Pseudechetoxin From Pseudechis Australis Length = 211

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 17/149 (11%)
Query: 25  SHAQNSPQDYLDAHNSARAAVY-----VPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGP 79
           S+ +N  ++ +D HN+ R +V      +  + WN   A  A+ ++N     C   HS   
Sbjct: 1   SNKKNYQKEIVDKHNALRRSVKPTARNMLQMKWNSRAAQNAKRWANR----CTFAHSPPN 56
Query: 80  Y--------GENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNS 131
                    GEN+   S  F  +  V  W  E  N+ Y       G V GHYTQVVW  S
Sbjct: 57  KRTVGKLRCGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKS 116
Query: 132 IRVGCARVQCSNGWWFVTCSYDPPGNYIG 160
             +GCA  +CS+  +   C Y P GN  G
Sbjct: 117 YLIGCASAKCSSSKYLYVCQYCPAGNIRG 145

>pdb|1XTA|A Chain A, Crystal Structure Of Natrin, A Snake Venom Crisp From Taiwan Cobra (Naja Atra) Length = 221

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 23  QTSHAQNSPQDYLDAHNSARAAVY-----VPNIIWNDTVAAYAQNYSNSRIADCNLVHS- 76
           +++  +   ++ +D HNS R  V      +  + W    A+ A+ ++N+    C+L HS 
Sbjct: 7   ESTRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANT----CSLNHSP 62
Query: 77  -------GGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWR 129
                  G   GE++   S   T T  + LW  E  N+ Y       G V GHYTQ+VW 
Sbjct: 63  DNLRVLEGIQCGESIYMSSNARTWTEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWY 122
Query: 130 NSIRVGCARVQCSNGWW--FVTCSYDPPGNYIGQ 161
            + R GCA   C +  W  F  C Y P GN+ G+
Sbjct: 123 QTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGK 156

>pdb|1XX5|A Chain A, Crystal Structure Of Natrin From Naja Atra Snake Venom Length = 221

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 23  QTSHAQNSPQDYLDAHNSARAAVY-----VPNIIWNDTVAAYAQNYSNSRIADCNLVHS- 76
           +++  +   ++ +D HNS R  V      +  + W    A+ A+ ++N+    C+L HS 
Sbjct: 7   ESTRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANT----CSLNHSP 62
Query: 77  -------GGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWR 129
                  G   GE++   S   T T  + LW  E  N+ Y       G V GHYTQ+VW 
Sbjct: 63  DNLRVLEGIQCGESIYMSSNARTWTEIIHLWHDEYKNFVYGVGANPPGSVTGHYTQIVWY 122
Query: 130 NSIRVGCARVQCSNGWW--FVTCSYDPPGNYIGQ 161
            + R GCA   C +  W  F  C Y P GN+ G+
Sbjct: 123 QTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGK 156

>pdb|3Q2R|A Chain A, Crystal Structure Of Sglipr1 Soaked With Zinc Chloride Length = 205

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 16  GSLALLIQTSHAQNSPQDYLDAHNSARAAVY-----VPNIIWNDTVAAYAQNYS------ 64
              A ++     ++  +D +  HN  R+ V      +  + W+  +A  A+ ++      
Sbjct: 4   AEFANILPDIENEDFIKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWASNCQFS 63
Query: 65  -NSRIADCNLVHSG-GPYGENLAKGS-GTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCG 121
            N+R+   + +H      GEN+  GS   F+ ++A++ W  E  +Y++ T  C   KVCG
Sbjct: 64  HNTRLKPPHKLHPNFTSLGENIWTGSVPIFSVSSAITNWYDEIQDYDFKTRICK--KVCG 121
Query: 122 HYTQVVWRNSIRVGCARVQC---------SNGWWFVTCSYDPPGNY 158
           HYTQVVW +S +VGCA   C         SNG  F+ C+Y P GNY
Sbjct: 122 HYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFI-CNYGPGGNY 166

>pdb|2DDB|A Chain A, Crystal Structure Of Pseudecin From Pseudechis Porphyriacus Length = 210

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 28  QNSPQDYLDAHNSARAAVY-----VPNIIWNDTVAAYAQNYSNSRIADCNLVHSGG---- 78
           +N  ++ +D HN+ R +V      +  + WN   A  A+ +++     C   HS      
Sbjct: 3   KNYQKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWADR----CTFAHSPPNTRT 58
Query: 79  ----PYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRV 134
                 GEN+   S  F  +  V  W  E  N+ Y       G V GHYTQVVW  S  +
Sbjct: 59  VGKLRCGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLI 118
Query: 135 GCARVQCSNGWWFVTCSYDPPGNYIG 160
           GCA  +CS+  +   C Y P GN  G
Sbjct: 119 GCASAKCSSSKYLYVCQYCPAGNIRG 144

>pdb|1WVR|A Chain A, Crystal Structure Of A Crisp Family Ca-Channel Blocker Derived From Snake Venom Length = 221

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 33  DYLDAHNSARAAVY-----VPNIIWNDTVAAYAQNYS----NSRIADCNLVHSGGPYGEN 83
           + +D HNS R +V      +  + W    AA A+ ++     S  +  + V  G   GEN
Sbjct: 17  EIIDLHNSLRRSVNPTASNMLKMEWYPEAAANAERWAYRCIESHSSRDSRVIGGIKCGEN 76
Query: 84  LAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQC-- 141
           +   +     T  +  W  E  ++ Y      +  V GHYTQ+VW  S R GCA   C  
Sbjct: 77  IYMATYPAKWTDIIHAWHGEYKDFKYGVGAVPSDAVIGHYTQIVWYKSYRAGCAAAYCPS 136
Query: 142 SNGWWFVTCSYDPPGNYIGQ 161
           S   +F  C Y P GN IG+
Sbjct: 137 SKYSYFYVCQYCPAGNIIGK 156

>pdb|1RC9|A Chain A, Crystal Structure Of Stecrisp, A Member Of Crisp Family From Trimeresurus Stejnegeri Refined At 1.6 Angstroms Resolution: Structual Relationship Of The Two Domains Length = 221

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 81  GENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQ 140
           GEN+         T  +  W  E  ++ Y         V GHYTQ+VW  S R+GCA   
Sbjct: 74  GENIYMSPYPMKWTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYRIGCAAAY 133
Query: 141 CSNGW--WFVTCSYDPPGNYIGQ 161
           C +    +F  C Y P GN+IG+
Sbjct: 134 CPSSPYSYFFVCQYCPAGNFIGK 156

>pdb|1QNX|A Chain A, Ves V 5, An Allergen From Vespula Vulgaris Venom Length = 209

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 49/193 (25%)
Query: 13  CFMGSLA------LLIQTSHAQNSPQDYLDAHNSARAAVY-----------------VPN 49
           C  GSL       +++     +   QD L  HN  R  +                  + N
Sbjct: 22  CKYGSLKPNCGNKVVVSYGLTKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKN 81
Query: 50  IIWNDTVAAYAQNYSNSRIADCNLVHSGGPY--GENLAKGSGTFTGTAA---------VS 98
           ++WND +A  AQ ++N      +       Y  G+N+A      TG+ A         V 
Sbjct: 82  LVWNDELAYVAQVWANQCQYGHDTCRDVAKYQVGQNVA-----LTGSTAAKYDDPVKLVK 136
Query: 99  LWVAEKANYN----YSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWW---FVTCS 151
           +W  E  +YN    +S N        GHYTQ+VW N+  VGC  ++     W   ++ C+
Sbjct: 137 MWEDEVKDYNPKKKFSGNDFLK---TGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCN 193
Query: 152 YDPPGNYIGQKPY 164
           Y P GN+  ++ Y
Sbjct: 194 YGPSGNFKNEELY 206

>pdb|2VZN|A Chain A, Crystal Structure Of The Major Allergen From Fire Ant Venom, Sol I 3 Length = 218

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 25/141 (17%)
Query: 44  AVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSG------GPYGENLA----KGSGTFTG 93
           AV +PN+ W+  +A  AQ ++N     C   H           G+N+A     G    T 
Sbjct: 73  AVKMPNLTWDPELATIAQRWANQ----CTFEHDACRNVERFAVGQNIAATSSSGKNKSTP 128
Query: 94  TAAVSLWVAEKANYN------YSTNTCAAGKVCGHYTQVVWRNSIRVGCARV--QCSNGW 145
              + LW  E  +++      + ++     KV GHYTQ+VW  + ++GC R+  +  + W
Sbjct: 129 NEMILLWYNEVKDFDNRWISSFPSDDNILMKV-GHYTQIVWAKTTKIGCGRIMFKEPDNW 187
Query: 146 --WFVTCSYDPPGNYIGQKPY 164
              ++ C+Y P GN +G   Y
Sbjct: 188 TKHYLVCNYGPAGNVLGAPIY 208

>pdb|1U53|A Chain A, Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein From The Nematode Parasite Necator Americanus And A Vaccine Antigen For Human Hookworm Infection Length = 196

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 69/164 (42%), Gaps = 27/164 (16%)
Query: 27  AQNSPQDYLDAHNSARAAVYV-----------PNIIWNDTVA--AYAQNYSNSRIADCNL 73
           ++ + Q +L+ HNS R++V +           P      T+A     +  + +    C  
Sbjct: 13  SEEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNAKQCVF 72
Query: 74  VHSG----GPYGEN--LAKGSGTFTGTAAV---SLWVAEKANYNYSTNTCAAG----KVC 120
            HS        GEN  ++  SG     AA      W  E A      N    G    +  
Sbjct: 73  KHSQPNQRKGLGENIFMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGV 132
Query: 121 GHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
           GHYTQ+VW+ ++++GC    CSN   +V C Y P GN +G+  Y
Sbjct: 133 GHYTQMVWQETVKLGCYVEACSN-MCYVVCQYGPAGNMMGKDIY 175

>pdb|3NT8|A Chain A, Crystal Structure Of Na-Asp-1 Length = 424

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 121 GHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
           GHYTQ+ W  + ++GCA V C N + F  C Y P GNY+G   Y
Sbjct: 357 GHYTQMAWDTTYKLGCAVVFC-NDFTFGVCQYGPGGNYMGHVIY 399

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	164
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	4e-72
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	5e-67
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	2e-52
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	5e-50
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	8e-49
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	4e-48
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	2e-47
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	8e-43
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	8e-38
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	1e-37
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	1e-23
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	5e-13

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1 Length = 135

 Score =  212 bits (541), Expect = 4e-72
 Identities = 89/137 (64%), Positives = 108/137 (78%), Gaps = 2/137 (1%)

Query: 28  QNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKG 87
           QNSPQDYL  HN ARA V V  + W+  +A+ AQNY+NSR  DCNL+HSG   GENLAKG
Sbjct: 1   QNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSG--AGENLAKG 58

Query: 88  SGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWF 147
            G FTG AAV LWV+E+ +YNY+TN C  GK C HYTQVVWRNS+R+GC R +C+NGWWF
Sbjct: 59  GGDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWF 118

Query: 148 VTCSYDPPGNYIGQKPY 164
           ++C+YDP GN+IGQ+PY
Sbjct: 119 ISCNYDPVGNWIGQRPY 135

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A* Length = 154

 Score =  199 bits (509), Expect = 5e-67
 Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 6/145 (4%)

Query: 24  TSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSG----GP 79
            S ++    + L AHN  R    VP +     +   AQ YS +  +   L HS     G 
Sbjct: 3   KSASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQ 62

Query: 80  YGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARV 139
            GENLA  S   TG      W +E  NYN+      +G   GH+T +VW+N+ ++G  + 
Sbjct: 63  CGENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKA 120

Query: 140 QCSNGWWFVTCSYDPPGNYIGQKPY 164
             S+G  FV   Y P GN + +  +
Sbjct: 121 SASDGSSFVVARYFPAGNVVNEGFF 145

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A Length = 210

 Score =  164 bits (417), Expect = 2e-52
 Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 19/154 (12%)

Query: 26  HAQNSPQDYLDAHNSARAAVY-----VPNIIWNDTVAAYAQNYSNSRIADCNLVHS---- 76
           + +N  ++ +D HN+ R +V      +  + WN   A  A+ +++     C   HS    
Sbjct: 1   NKKNYQKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWADR----CTFAHSPPNT 56

Query: 77  ----GGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSI 132
                   GEN+   S  F  +  V  W  E  N+ Y       G V GHYTQVVW  S 
Sbjct: 57  RTVGKLRCGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSH 116

Query: 133 RVGCARVQCSNGWWFVTCSYDPPGNYIGQ--KPY 164
            +GCA  +CS+  +   C Y P GN  G    PY
Sbjct: 117 LIGCASAKCSSSKYLYVCQYCPAGNIRGSIATPY 150

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A Length = 221

 Score =  159 bits (403), Expect = 5e-50
 Identities = 49/159 (30%), Positives = 72/159 (45%), Gaps = 21/159 (13%)

Query: 23  QTSHAQNSPQDYLDAHNSARAAVYVP-----NIIWNDTVAAYAQNYSNSRIADCNLVHS- 76
           +++  +   ++ +D HNS R  V         + W    A+ A+ ++N+    C+L HS 
Sbjct: 7   ESTRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANT----CSLNHSP 62

Query: 77  -------GGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWR 129
                  G   GE++   S   T T  + LW  E  N+ Y       G V GHYTQ+VW 
Sbjct: 63  DNLRVLEGIQCGESIYMSSNARTWTEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWY 122

Query: 130 NSIRVGCARVQCSNGWW--FVTCSYDPPGNYIGQ--KPY 164
            + R GCA   C +  W  F  C Y P GN+ G+   PY
Sbjct: 123 QTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGKTATPY 161

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1 Length = 209

 Score =  155 bits (394), Expect = 8e-49
 Identities = 41/164 (25%), Positives = 63/164 (38%), Gaps = 27/164 (16%)

Query: 28  QNSPQDYLDAHNSARAAVYV-----------------PNIIWNDTVAAYAQNYSNSRIAD 70
           +   QD L  HN  R  +                    N++WND +A  AQ ++N     
Sbjct: 43  KQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQYG 102

Query: 71  CNLVHS--GGPYGENLAKGSGT----FTGTAAVSLWVAEKANYNYSTNTCA-AGKVCGHY 123
            +          G+N+A    T          V +W  E  +YN             GHY
Sbjct: 103 HDTCRDVAKYQVGQNVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHY 162

Query: 124 TQVVWRNSIRVGCARVQCSNGWW---FVTCSYDPPGNYIGQKPY 164
           TQ+VW N+  VGC  ++     W   ++ C+Y P GN+  ++ Y
Sbjct: 163 TQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEELY 206

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A Length = 205

 Score =  153 bits (389), Expect = 4e-48
 Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 25/170 (14%)

Query: 17  SLALLIQTSHAQNSPQDYLDAHNSARAAVYVP-----NIIWNDTVAAYAQNY-------- 63
             A ++     ++  +D +  HN  R+ V         + W+  +A  A+ +        
Sbjct: 5   EFANILPDIENEDFIKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWASNCQFSH 64

Query: 64  SNSRIADCNLVHSGGPYGENLAKGSG-TFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGH 122
           +        L  +    GEN+  GS   F+ ++A++ W  E  +Y++ T  C   KVCGH
Sbjct: 65  NTRLKPPHKLHPNFTSLGENIWTGSVPIFSVSSAITNWYDEIQDYDFKTRIC--KKVCGH 122

Query: 123 YTQVVWRNSIRVGCARVQCSNG--------WWFVTCSYDPPGNYIGQKPY 164
           YTQVVW +S +VGCA   C                C+Y P GNY    PY
Sbjct: 123 YTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGNY-PTWPY 171

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus} Length = 196

 Score =  151 bits (383), Expect = 2e-47
 Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 27/164 (16%)

Query: 27  AQNSPQDYLDAHNSARAAVYV-----------------PNIIWNDTVAAYAQNYSNSRIA 69
           ++ + Q +L+ HNS R++V +                   + ++  V   A N +   + 
Sbjct: 13  SEEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNAKQCVF 72

Query: 70  DCNLVHSGGPYGENLAKGSGT-----FTGTAAVSLWVAEKANYNYSTNTCA----AGKVC 120
             +  +     GEN+   S +          A   W  E A      N         +  
Sbjct: 73  KHSQPNQRKGLGENIFMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGV 132

Query: 121 GHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY 164
           GHYTQ+VW+ ++++GC    CSN  + V C Y P GN +G+  Y
Sbjct: 133 GHYTQMVWQETVKLGCYVEACSNMCYVV-CQYGPAGNMMGKDIY 175

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta} Length = 218

 Score =  140 bits (355), Expect = 8e-43
 Identities = 39/173 (22%), Positives = 64/173 (36%), Gaps = 40/173 (23%)

Query: 28  QNSPQDYLDAHNSARA-----------------AVYVPNIIWNDTVAAYAQNYSNSRIAD 70
                  ++ HN  R                  AV +PN+ W+  +A  AQ ++N     
Sbjct: 40  DAEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIAQRWANQ---- 95

Query: 71  CNLVHS------GGPYGENLAKGSGT----FTGTAAVSLWVAEKANYNYSTNTCA----- 115
           C   H           G+N+A  S +     T    + LW  E  +++    +       
Sbjct: 96  CTFEHDACRNVERFAVGQNIAATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDN 155

Query: 116 AGKVCGHYTQVVWRNSIRVGCARVQCSNG----WWFVTCSYDPPGNYIGQKPY 164
                GHYTQ+VW  + ++GC R+           ++ C+Y P GN +G   Y
Sbjct: 156 ILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLVCNYGPAGNVLGAPIY 208

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score =  132 bits (334), Expect = 8e-38
 Identities = 44/185 (23%), Positives = 64/185 (34%), Gaps = 38/185 (20%)

Query: 13  CFMGSLALLIQTSHAQNSPQDYLDAHNSARA-----------------AVYVPNIIWNDT 55
               +      T    +    +L  HN  R+                 A  +  ++++  
Sbjct: 220 VPETNQQCPSNTGMTDSVRDTFLSVHNEFRSSVARGLEPDALGGNAPKAAKMLKMVYDCE 279

Query: 56  VAAYAQNYSNSRIADCNLVHSGGP----YGENLAKGSG-----TFTGTAAVSLWVAEKAN 106
           V A A  + N     C   HS G      GEN+ K S            A  LW  E   
Sbjct: 280 VEASAIRHGNK----CVYQHSHGEDRPGLGENIYKTSVLKFDKNKAAKQASQLWWNELKE 335

Query: 107 YNYSTNTCAA-------GKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYI 159
           Y    +               GHYTQ+ W  + ++GCA V C++  + V C Y P GNY+
Sbjct: 336 YGVGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKLGCAVVFCNDFTFGV-CQYGPGGNYM 394

Query: 160 GQKPY 164
           G   Y
Sbjct: 395 GHVIY 399

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score =  132 bits (332), Expect = 1e-37
 Identities = 31/189 (16%), Positives = 59/189 (31%), Gaps = 32/189 (16%)

Query: 3   MSSISLALAICFMGSLALLIQTSHAQNSP---QDYLDAHNSARA---------------- 43
           + S+   +A C           S++  +    Q +LD HN+AR                 
Sbjct: 6   VVSVVFTIAFCNASPARDSFGCSNSGITDSDRQAFLDFHNNARRRVAKGLEDSNSGKLNP 65

Query: 44  AVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGG-PYGENLAKGSGT-------FTGTA 95
           A  +  + W+  +    Q+   S    C    +G     +N    S +            
Sbjct: 66  AKNMYKLSWDCAMEQQLQDAIQS----CPSGFAGIQGVAQNTMSWSSSGGYPDPSVKIEP 121

Query: 96  AVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPP 155
            +S W +         +    G     ++ +V+  + ++GCA   C        C Y+  
Sbjct: 122 TLSGWWSGAKKNGVGPDNKYTGGGLFAFSNMVYSETTKLGCAYKVCGTKLAVS-CIYNGV 180

Query: 156 GNYIGQKPY 164
           G    Q  +
Sbjct: 181 GYITNQPMW 189

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C* Length = 233

 Score = 91.7 bits (227), Expect = 1e-23
 Identities = 25/160 (15%), Positives = 43/160 (26%), Gaps = 28/160 (17%)

Query: 32  QDYLDAHNSARAAV-----------YVPNIIWNDTVAAYAQNYSNSRIA---DCNLVHSG 77
            + L   N  R  V            +  ++W+  +A  A+ ++   +     C      
Sbjct: 42  NEILSKINDVRDHVAKGSWGLPVAARMKVVVWDAELAGLAKRHTKGCVGETHACRNTERF 101

Query: 78  GPYGENLAKGSGTFTGTA------AVSLWVAEKANYNYST----NTCAAGKVCGHYTQVV 127
              G+   K SG            AV     +K N                        +
Sbjct: 102 WLPGQLNFKYSGDKLPRIKELIDDAVKKGHLQKHNITREIIENYRENGPNGDVKELALAI 161

Query: 128 WRNSIRVGCARVQCSNGWW---FVTCSYDPPGNYIGQKPY 164
                 VGC      +G      +TC++    N  G+  Y
Sbjct: 162 SDRVTAVGCGLTTWEDGAKARALLTCNFS-SQNTRGRPVY 200

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A Length = 206

 Score = 62.8 bits (152), Expect = 5e-13
 Identities = 20/150 (13%), Positives = 40/150 (26%), Gaps = 36/150 (24%)

Query: 32  QDYLDAHNSARA------------AVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGP 79
           +     HN  R             A  +  ++++  +   A+                  
Sbjct: 20  EAIDTFHNGLRQRIAKGEAEGYGPAREMYGLVYDCGLEEEARKEIKL----PGYADL--- 72

Query: 80  YGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARV 139
           +   + + SG + G+A  +L    +                    QVV+  + R GC+  
Sbjct: 73  HHRGVTRFSGDYEGSAISALKEILETFSAD----------KNSMRQVVYPKATRFGCSGR 122

Query: 140 QCSNGWW-----FVTCSYDPPGNYIGQKPY 164
              N           C YD        + +
Sbjct: 123 LRRNKKTGMRRMDWVCVYDKKPK--DGESF 150

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	164
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	100.0
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	100.0
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	100.0
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	100.0
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	100.0
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	100.0
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	100.0
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	100.0
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	100.0
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	100.0
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	100.0
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	99.97
4ifa_A	339	Extracellular protein containing A SCP domain; vac	99.61
4h0a_A	323	Uncharacterized protein; CAP protein family, cyste	99.35

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1

Probab=100.00  E-value=2.2e-45  Score=254.22  Aligned_cols=134  Identities=66%  Similarity=1.286  Sum_probs=126.3

Q ss_pred             CchHHHHHHHHHHHhhCCCCCCCccHHHHHHHHHHHhhcccCCccccCCCCccceEEeecCCCCHHHHHHHHHhccccCC
Q 048073           29 NSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANYN  108 (164)
Q Consensus        29 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~~~g~n~~~~~~~~~~~~~v~~W~~e~~~~~  108 (164)
                      +.+++||+.||.+|+.++|++|+||++|+..|+.||++|++.|.+.|+++  |||++++.++.++.++|+.|++|...|+
T Consensus         2 ~~~~~iL~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~a~~c~~~hs~~--GENla~~~~~~~~~~~v~~W~~E~~~y~   79 (135)
T 1cfe_A            2 NSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAKGGGDFTGRAAVQLWVSERPSYN   79 (135)
T ss_dssp             CSHHHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHTTTCCSCSCSS--SBCCEECSSSCCHHHHHHHHHTTGGGEE
T ss_pred             cHHHHHHHHHHHHHHHcCCCccCcCHHHHHHHHHHHHHHhcCCCcccCCC--CeEEEEecCCCCHHHHHHHHHhHHhhCC
Confidence            57899999999999999999999999999999999999999999999886  9999987655689999999999999999


Q ss_pred             CCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCCCCEEEEEEecCCCCCCCCCCC
Q 048073          109 YSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY  164 (164)
Q Consensus       109 ~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y  164 (164)
                      ++.+.+..++.++|||||||+++++||||++.|.+++.++||+|+|+||+.|++||
T Consensus        80 ~~~~~~~~~~~~gHfTQ~vW~~t~~vGCa~~~c~~~~~~~VC~Y~p~GN~~g~~pY  135 (135)
T 1cfe_A           80 YATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             GGGTEECSSSCCSSHHHHHCTTCCEEEEEEEECTTSSEEEEEECSSCCSCTTSCCC
T ss_pred             CCCCCcCCCCcccceeeeEEccCcEEeEEEEEeCCCCEEEEEEEeCCCCCCCCCCC
Confidence            99888877778999999999999999999999987779999999999999999998

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A*

Probab=100.00  E-value=5.8e-45  Score=257.26  Aligned_cols=138  Identities=33%  Similarity=0.512  Sum_probs=127.3

Q ss_pred             cCCCCchHHHHHHHHHHHhhCCCCCCCccHHHHHHHHHHHhhcccCCccccCC----CCccceEEeecCCCCHHHHHHHH
Q 048073           25 SHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSG----GPYGENLAKGSGTFTGTAAVSLW  100 (164)
Q Consensus        25 ~~~~~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~----~~~g~n~~~~~~~~~~~~~v~~W  100 (164)
                      +.+++++++||+.||.+|+.|++++|+||++|++.||.||++++..|.+.|++    +.+|||+++...+.+..++|+.|
T Consensus         4 s~~~~f~~~iL~~HN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~~~~~hs~~~~~~~~GeNl~~~~~~~~~~~~v~~W   83 (154)
T 4aiw_A            4 SASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYDQTGKEVADRW   83 (154)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCCCCHHHHTTSSEEEEEEESSCCCHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHHHhhhcccccccccCCCCCCCeeeEecCCCCCHHHHHHHH
Confidence            34567899999999999999999999999999999999999999999999875    47899999888778899999999


Q ss_pred             HhccccCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCCCCEEEEEEecCCCCCCCCCCC
Q 048073          101 VAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY  164 (164)
Q Consensus       101 ~~e~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y  164 (164)
                      |+|...|+|..+.+..+  ++|||||||+++++||||++.|.+++.++||+|+|+||+.|+.+|
T Consensus        84 ~~E~~~y~~~~~~~~~~--~gHfTQ~VW~~t~~vGCg~a~c~~~~~~vVC~Y~P~GN~~g~~~y  145 (154)
T 4aiw_A           84 YSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFF  145 (154)
T ss_dssp             HGGGGGCCTTSCSCCTT--THHHHHHHCTTCCEEEEEEEECTTSCEEEEEEEESCCCCCSTTHH
T ss_pred             HHHhhhcccCCCCcCCC--cCCeeeeehhhhceeeeEEEEcCCCCEEEEEEEeCCCccCCccch
Confidence            99999999998877654  999999999999999999999998889999999999999998776

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A

Probab=100.00  E-value=4.9e-39  Score=237.36  Aligned_cols=133  Identities=35%  Similarity=0.688  Sum_probs=120.1

Q ss_pred             CCchHHHHHHHHHHHhhCC-----CCCCCccHHHHHHHHHHHhhcccCCccccCCC--------CccceEEeecCCCCHH
Q 048073           28 QNSPQDYLDAHNSARAAVY-----VPNIIWNDTVAAYAQNYSNSRIADCNLVHSGG--------PYGENLAKGSGTFTGT   94 (164)
Q Consensus        28 ~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~--------~~g~n~~~~~~~~~~~   94 (164)
                      ++++++||+.||.+|+.|+     |.+|+||++||+.||.||+    .|.+.|++.        .+|||++++....++.
T Consensus         3 ~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~Hs~~~~r~~~~~~~GENl~~~~~~~~~~   78 (210)
T 2ddb_A            3 KNYQKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWAD----RCTFAHSPPNTRTVGKLRCGENIFMSSQPFPWS   78 (210)
T ss_dssp             -CHHHHHHHHHHHHHTTCSSCBSSCBCCEECHHHHHHHHHHHT----TTCCSCCCGGGSEETTEECEEEEEEESSCCCHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCccccCcccccCHHHHHHHHHHHh----cCCCCCCCccccccCCCCCcceEEEEcCCCCHH
Confidence            5678999999999999995     8899999999999999999    599988752        4799999887666789


Q ss_pred             HHHHHHHhccccCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCCCCEEEEEEecCCCCCCCC--CCC
Q 048073           95 AAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQ--KPY  164 (164)
Q Consensus        95 ~~v~~W~~e~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~--~~Y  164 (164)
                      ++|+.||+|...|+|+.+.+..+..++|||||||+++++||||++.|..+.+++||+|+|+||+.|+  +||
T Consensus        79 ~av~~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~VC~Y~P~GN~~g~~~~pY  150 (210)
T 2ddb_A           79 GVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCASAKCSSSKYLYVCQYCPAGNIRGSIATPY  150 (210)
T ss_dssp             HHHHHHHGGGGGEETTTEESSTTSCCHHHHHHTCTTCCEEEEEEEEEETTEEEEEEEEESCSSSTTCTTCSS
T ss_pred             HHHHHHHHHhhhCCCCCCCCCCCCcccchhhhhhhhccEeeEEEEEcCCCCEEEEEEeeCCCCCCCCccCCC
Confidence            9999999999999998876666778999999999999999999999987678999999999999999  888

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A

Probab=100.00  E-value=9.7e-39  Score=237.44  Aligned_cols=136  Identities=35%  Similarity=0.689  Sum_probs=122.0

Q ss_pred             cCCCCchHHHHHHHHHHHhhCC-----CCCCCccHHHHHHHHHHHhhcccCCccccCCC--------CccceEEeecCCC
Q 048073           25 SHAQNSPQDYLDAHNSARAAVY-----VPNIIWNDTVAAYAQNYSNSRIADCNLVHSGG--------PYGENLAKGSGTF   91 (164)
Q Consensus        25 ~~~~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~--------~~g~n~~~~~~~~   91 (164)
                      ..++++++.||+.||.+|+.|+     |.+|+||++||+.||.||+    .|.+.|++.        .+|||++++....
T Consensus         9 ~~~~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~Hs~~~~r~~~~~~~GENl~~~~~~~   84 (221)
T 1xta_A            9 TRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWAN----TCSLNHSPDNLRVLEGIQCGESIYMSSNAR   84 (221)
T ss_dssp             TTSHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHT----TTCCSCCCGGGCEETTEECEEEEEEESSCC
T ss_pred             CCCHHHHHHHHHHHHHHHHhcCCccccCccCccCHHHHHHHHHHHh----cCCCCCcCccccccCCCCCceEEEeecCCC
Confidence            4556789999999999999995     8899999999999999999    599988752        4799999887666


Q ss_pred             CHHHHHHHHHhccccCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCCC--CEEEEEEecCCCCCCCC--CCC
Q 048073           92 TGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNG--WWFVTCSYDPPGNYIGQ--KPY  164 (164)
Q Consensus        92 ~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~--~~~~vC~Y~p~gn~~g~--~~Y  164 (164)
                      ++.++|+.||+|...|+|+.+.+..+..++|||||||+++++||||++.|..+  .+++||+|+|+||+.|+  +||
T Consensus        85 ~~~~av~~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~VC~Y~P~GN~~g~~~~pY  161 (221)
T 1xta_A           85 TWTEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGKTATPY  161 (221)
T ss_dssp             CHHHHHHHHHGGGGGEETTTEESSTTCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTTTTCSS
T ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCCCCchhHHHHHHHHhcCEeeEEEEEcCCCCccEEEEEEEeCCcCCCCCcCCCc
Confidence            78999999999999999988766667779999999999999999999999864  58999999999999999  888

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus}

Probab=100.00  E-value=3.6e-38  Score=230.55  Aligned_cols=137  Identities=30%  Similarity=0.575  Sum_probs=118.2

Q ss_pred             hccCCCCchHHHHHHHHHHHhhC-----------------CCCCCCccHHHHHHHHHHHhhcccCCccccCC----CCcc
Q 048073           23 QTSHAQNSPQDYLDAHNSARAAV-----------------YVPNIIWNDTVAAYAQNYSNSRIADCNLVHSG----GPYG   81 (164)
Q Consensus        23 ~~~~~~~~~~~il~~hN~~R~~~-----------------~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~----~~~g   81 (164)
                      ...+++++++.||+.||.+|+.|                 +|++|+||++||..||.||+    .|.+.|+.    ..+|
T Consensus         9 ~~~lt~~~~~~iL~~HN~~R~~~a~G~~~~~~g~~~p~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~G   84 (196)
T 1u53_A            9 DNGMSEEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNAK----QCVFKHSQPNQRKGLG   84 (196)
T ss_dssp             SSSCCHHHHHHHHHHHHHHHHHHHTTCCBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHT----TCCCCCCCGGGSTTCE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhCCCcccCCCCcCCccccchhcccCHHHHHHHHHHHH----hCccCCCccccCCCCC
Confidence            34667778999999999999998                 27799999999999999999    59998874    3689


Q ss_pred             ceEEeecCCC-----CHHHHHHHHHhccccCCCCC-CCCC---CCcccchHHHHHHHhcCeeeEEEEEeCCCCEEEEEEe
Q 048073           82 ENLAKGSGTF-----TGTAAVSLWVAEKANYNYST-NTCA---AGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSY  152 (164)
Q Consensus        82 ~n~~~~~~~~-----~~~~~v~~W~~e~~~~~~~~-~~~~---~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~vC~Y  152 (164)
                      ||+++..+..     .+.++|+.||+|...|++.. +.+.   .++.++|||||||+++++||||++.|.+ ..++||+|
T Consensus        85 eNl~~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~ghfTQ~VW~~t~~vGCa~~~c~~-~~~~VC~Y  163 (196)
T 1u53_A           85 ENIFMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCYVEACSN-MCYVVCQY  163 (196)
T ss_dssp             EEEEEESCTTCCHHHHHHHHHHHHHTHHHHHCCCSCCBCCHHHHTTTCHHHHHHTCTTCCEEEEEEEECSS-CEEEEEEE
T ss_pred             eEEEEECCCCCCHHHHHHHHHHHHHHHHHHcCCCcccccCccccCccccchheeeecccCEEeeEEEEeCC-CEEEEEEe
Confidence            9999765432     35889999999999999887 4443   2456999999999999999999999986 59999999


Q ss_pred             cCCCCCCCCCCC
Q 048073          153 DPPGNYIGQKPY  164 (164)
Q Consensus       153 ~p~gn~~g~~~Y  164 (164)
                      +|+||+.|++||
T Consensus       164 ~p~GN~~g~~~Y  175 (196)
T 1u53_A          164 GPAGNMMGKDIY  175 (196)
T ss_dssp             ESCCCCTTSBSS
T ss_pred             CCCCCCCCCcCC
Confidence            999999999998

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1

Probab=100.00  E-value=3.3e-38  Score=232.92  Aligned_cols=136  Identities=30%  Similarity=0.563  Sum_probs=115.5

Q ss_pred             cCCCCchHHHHHHHHHHHhhCC-----------------CCCCCccHHHHHHHHHHHhhcccCCccccCC------CCcc
Q 048073           25 SHAQNSPQDYLDAHNSARAAVY-----------------VPNIIWNDTVAAYAQNYSNSRIADCNLVHSG------GPYG   81 (164)
Q Consensus        25 ~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~------~~~g   81 (164)
                      .+++++++.||+.||.+|+.|+                 |++|+||++||..||.||+    .|.+.|+.      ..+|
T Consensus        40 ~l~~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~~~G  115 (209)
T 1qnx_A           40 GLTKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWAN----QCQYGHDTCRDVAKYQVG  115 (209)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHHT----TCCCSCCSCCCCSSSCCE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCccccccccccCHHHHHHHHHHHh----cCcccCCCccCCCCCCCc
Confidence            4555679999999999999982                 8899999999999999999    59888874      1489


Q ss_pred             ceEEeecC----CCCHHHHHHHHHhccccCCCCCCCC-CCCcccchHHHHHHHhcCeeeEEEEEeCCCC---EEEEEEec
Q 048073           82 ENLAKGSG----TFTGTAAVSLWVAEKANYNYSTNTC-AAGKVCGHYTQVVWRNSIRVGCARVQCSNGW---WFVTCSYD  153 (164)
Q Consensus        82 ~n~~~~~~----~~~~~~~v~~W~~e~~~~~~~~~~~-~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~---~~~vC~Y~  153 (164)
                      ||+++...    ...+.++|+.||+|...|++..... ..+..++|||||||+++++||||++.|..++   .++||+|+
T Consensus       116 eNl~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~  195 (209)
T 1qnx_A          116 QNVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYG  195 (209)
T ss_dssp             EEEEEEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             cEEEEecccCCCcccHHHHHHHHHHhhhhcCCccCCCCCCCCcccchhhhhhhcCcEeeeEEEEEeCCCceeEEEEEEeC
Confidence            99997653    2368899999999999999985421 1224689999999999999999999997643   68999999


Q ss_pred             CCCCCCCCCCC
Q 048073          154 PPGNYIGQKPY  164 (164)
Q Consensus       154 p~gn~~g~~~Y  164 (164)
                      |+||+.|++||
T Consensus       196 P~GN~~g~~~Y  206 (209)
T 1qnx_A          196 PSGNFKNEELY  206 (209)
T ss_dssp             SCCCCTTSCSS
T ss_pred             CCCCCCCCCCC
Confidence            99999999998

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta}

Probab=100.00  E-value=2.4e-37  Score=229.66  Aligned_cols=136  Identities=28%  Similarity=0.604  Sum_probs=114.2

Q ss_pred             cCCCCchHHHHHHHHHHHhhCC-----------------CCCCCccHHHHHHHHHHHhhcccCCccccCC------CCcc
Q 048073           25 SHAQNSPQDYLDAHNSARAAVY-----------------VPNIIWNDTVAAYAQNYSNSRIADCNLVHSG------GPYG   81 (164)
Q Consensus        25 ~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~------~~~g   81 (164)
                      .+++++++.||+.||.+|+.|+                 |++|+||++||+.||.||+    .|.+.|+.      ..+|
T Consensus        37 ~~t~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A~----~C~~~Hs~c~~~~~~~~G  112 (218)
T 2vzn_A           37 GFTDAEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIAQRWAN----QCTFEHDACRNVERFAVG  112 (218)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTTCCCCCTTSCCCCBSCCCCCEECHHHHHHHHHHHT----TCCSSCCSCCCCSSSCCE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCchhhchhccCCHHHHHHHHHHHH----hCCcCCCCCCCCccCCCc
Confidence            4455678999999999999982                 8899999999999999999    59888875      2489


Q ss_pred             ceEEeecCC----CCHHHHHHHHHhccccCCCCCCC---CC--CCcccchHHHHHHHhcCeeeEEEEEeCC-C---CEEE
Q 048073           82 ENLAKGSGT----FTGTAAVSLWVAEKANYNYSTNT---CA--AGKVCGHYTQVVWRNSIRVGCARVQCSN-G---WWFV  148 (164)
Q Consensus        82 ~n~~~~~~~----~~~~~~v~~W~~e~~~~~~~~~~---~~--~~~~~~~f~q~iw~~~~~vGCa~~~c~~-~---~~~~  148 (164)
                      ||+++....    ....++|+.||+|...|++....   ..  ....++|||||||+++++||||++.|.. +   ..++
T Consensus       113 eNl~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~v  192 (218)
T 2vzn_A          113 QNIAATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYL  192 (218)
T ss_dssp             EEEEEEEECC-CCCCHHHHHHHHHGGGGGCCGGGSSSCCCCHHHHHHHHHHHHHTCTTCCEEEEEEEEEECTTSCEEEEE
T ss_pred             eEEEEEeccCCccchHHHHHHHHHHHHHhcCcccccCCCCCcccCCCcchHHHHHHHhcCEEeEEEEEEeCCCCeEEEEE
Confidence            999976532    35679999999999999987421   11  1245899999999999999999999986 3   3689


Q ss_pred             EEEecCCCCCCCCCCC
Q 048073          149 TCSYDPPGNYIGQKPY  164 (164)
Q Consensus       149 vC~Y~p~gn~~g~~~Y  164 (164)
                      ||+|+|+||+.|+++|
T Consensus       193 VC~Y~P~GN~~g~~~y  208 (218)
T 2vzn_A          193 VCNYGPAGNVLGAPIY  208 (218)
T ss_dssp             EEEEESCCCCTTSCSS
T ss_pred             EEEECCCCCCCCCccc
Confidence            9999999999999998

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A

Probab=100.00  E-value=3.8e-37  Score=226.59  Aligned_cols=131  Identities=36%  Similarity=0.742  Sum_probs=114.5

Q ss_pred             CCCchHHHHHHHHHHHhhCC-----CCCCCccHHHHHHHHHHHhhcccCCccccCC------------CCccceEEeecC
Q 048073           27 AQNSPQDYLDAHNSARAAVY-----VPNIIWNDTVAAYAQNYSNSRIADCNLVHSG------------GPYGENLAKGSG   89 (164)
Q Consensus        27 ~~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~------------~~~g~n~~~~~~   89 (164)
                      .++++++||+.||.+|+.|+     |.+|+||++||..||.||+    .|.+.|+.            +.+|||++.+..
T Consensus        15 ~~~f~~~~L~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~~~~~~~~~GeNl~~~~~   90 (205)
T 3q2u_A           15 NEDFIKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWAS----NCQFSHNTRLKPPHKLHPNFTSLGENIWTGSV   90 (205)
T ss_dssp             CHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHT----TCBSSCCTTSSTTCCSSTTCSSCEEEEEEEET
T ss_pred             CHHHHHHHHHHHHHHHHhcCCCcccCccCccCHHHHHHHHHHHH----hCCCCCCccccccccccCCCCCCceEEEEccC
Confidence            45689999999999999995     8899999999999999999    58777653            368999987763


Q ss_pred             -CCCHHHHHHHHHhccccCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCC--------CCEEEEEEecCCCCCCC
Q 048073           90 -TFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSN--------GWWFVTCSYDPPGNYIG  160 (164)
Q Consensus        90 -~~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~--------~~~~~vC~Y~p~gn~~g  160 (164)
                       ..++.++|+.|++|...|+|..+.+.  ..++|||||||+++++||||++.|..        .+.++||+|+|+||+ +
T Consensus        91 ~~~~~~~~v~~W~~E~~~y~~~~~~~~--~~~gHfTQ~VW~~t~~vGCa~~~c~~~~g~~~~~~~~~~VC~Y~P~GN~-~  167 (205)
T 3q2u_A           91 PIFSVSSAITNWYDEIQDYDFKTRICK--KVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGNY-P  167 (205)
T ss_dssp             TTCCHHHHHHHHHGGGGGEETTTTEES--SCCHHHHHHTCTTCCEEEEEEEEESCCBTCSSCCSEEEEEEEEESCCCC-S
T ss_pred             CCCCHHHHHHHHHhHHHhcCCCCCCcc--chhHHHHHHHhhcccEeeeEEEEcCCCcCcccccccEEEEEEEECCCCc-C
Confidence             45789999999999999999887664  45999999999999999999999985        247899999999998 7


Q ss_pred             CCCC
Q 048073          161 QKPY  164 (164)
Q Consensus       161 ~~~Y  164 (164)
                      ++||
T Consensus       168 ~~pY  171 (205)
T 3q2u_A          168 TWPY  171 (205)
T ss_dssp             SCSS
T ss_pred             CCCC
Confidence            8888

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=100.00  E-value=6.2e-37  Score=247.11  Aligned_cols=135  Identities=20%  Similarity=0.322  Sum_probs=118.7

Q ss_pred             cCCCCchHHHHHHHHHHHhhC----------------CCCCCCccHHHHHHHHHHHhhcccCCccccCCC-CccceEEee
Q 048073           25 SHAQNSPQDYLDAHNSARAAV----------------YVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGG-PYGENLAKG   87 (164)
Q Consensus        25 ~~~~~~~~~il~~hN~~R~~~----------------~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~-~~g~n~~~~   87 (164)
                      .++++.++.||+.||++|+.+                +|++|+||++||..||.||+    +|...|+.. .+|||++..
T Consensus        31 ~~~~~~~~~il~~HN~~R~~~A~G~~~~~~~~~p~A~nM~~L~Wd~eLa~~Aq~~a~----~C~~~h~~~~~~GeNl~~~  106 (424)
T 3nt8_A           31 GITDSDRQAFLDFHNNARRRVAKGLEDSNSGKLNPAKNMYKLSWDCAMEQQLQDAIQ----SCPSGFAGIQGVAQNTMSW  106 (424)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHTTCCBCSSSBCCCEESCBCCEECHHHHHHHHHHCT----TCCSSCCCCTTCEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCcccCCCCCCcccccCCccccCHHHHHHHHHHHh----hCCCcCCCCCCceeeEEec
Confidence            556678999999999999999                38899999999999999999    599888764 799999876


Q ss_pred             cC-------CCCHHHHHHHHHhccccCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCCCCEEEEEEecCCCCCCC
Q 048073           88 SG-------TFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIG  160 (164)
Q Consensus        88 ~~-------~~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g  160 (164)
                      ..       ...++++|+.||+|...|++.......+..++|||||||+++++||||++.|.. ++++||+|+|+||+.|
T Consensus       107 ~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~ghfTqmvw~~t~~vGCa~~~c~~-~~~~VC~Y~p~GN~~g  185 (424)
T 3nt8_A          107 SSSGGYPDPSVKIEPTLSGWWSGAKKNGVGPDNKYTGGGLFAFSNMVYSETTKLGCAYKVCGT-KLAVSCIYNGVGYITN  185 (424)
T ss_dssp             ECTTCCSCGGGGHHHHHHHHHTHHHHHCCCTTCBCCCTTCHHHHHHHCTTCCEEEEEEEEETT-EEEEEEEESSCCCSTT
T ss_pred             cccCCcCCHHHHHHHHHHHHHHHHHHcCCcccccCCCcchHHHHHHHHHhcCeeceEEEEeCC-cEEEEEEECCCCCccc
Confidence            51       124789999999999999998655555567899999999999999999999987 6999999999999999


Q ss_pred             CCCC
Q 048073          161 QKPY  164 (164)
Q Consensus       161 ~~~Y  164 (164)
                      ++||
T Consensus       186 ~~~Y  189 (424)
T 3nt8_A          186 QPMW  189 (424)
T ss_dssp             CBSS
T ss_pred             cccc
Confidence            9998

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C*

Probab=100.00  E-value=3.8e-36  Score=225.22  Aligned_cols=135  Identities=19%  Similarity=0.225  Sum_probs=112.4

Q ss_pred             cCCCCchHHHHHHHHHHHhhC-----------CCCCCCccHHHHHHHHHHHhhcccCCccccCC----C---CccceEEe
Q 048073           25 SHAQNSPQDYLDAHNSARAAV-----------YVPNIIWNDTVAAYAQNYSNSRIADCNLVHSG----G---PYGENLAK   86 (164)
Q Consensus        25 ~~~~~~~~~il~~hN~~R~~~-----------~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~----~---~~g~n~~~   86 (164)
                      .+++++++.||+.||.+|+.|           +|++|+||++||..||.||+    .|.+.|+.    .   .+|||++.
T Consensus        35 ~~s~~~~~~il~~HN~~R~~va~G~~~~P~A~nM~~L~Wd~~La~~Aq~~a~----~C~~~h~~c~~~~~~~~~Gen~~~  110 (233)
T 3u3l_C           35 ELLKEHRNEILSKINDVRDHVAKGSWGLPVAARMKVVVWDAELAGLAKRHTK----GCVGETHACRNTERFWLPGQLNFK  110 (233)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHTTCTTCCCBSSCBCCEECHHHHHHHHHHHT----TCCSCCCCBCCCSSCSSCEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHcCCCCCCccccCCccEECHHHHHHHHHHHH----hCCCCCCcccccCcCCcCeEEEEE
Confidence            345678999999999999999           59999999999999999999    59888765    1   58998876


Q ss_pred             ecCC--C----CHHHHHHHHHhccccCCCCC----CCCCCCcccchHHHHHHHhcCeeeEEEEEeCCC---CEEEEEEec
Q 048073           87 GSGT--F----TGTAAVSLWVAEKANYNYST----NTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNG---WWFVTCSYD  153 (164)
Q Consensus        87 ~~~~--~----~~~~~v~~W~~e~~~~~~~~----~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~---~~~~vC~Y~  153 (164)
                      ..+.  .    .+.++|+.||+|...|++..    .....++.++|||||||+++++||||++.|..+   .+++||+|+
T Consensus       111 ~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~gHfTQmVW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~  190 (233)
T 3u3l_C          111 YSGDKLPRIKELIDDAVKKGHLQKHNITREIIENYRENGPNGDVKELALAISDRVTAVGCGLTTWEDGAKARALLTCNFS  190 (233)
T ss_dssp             EEESSCCCHHHHHHHHHHHHHGGGGTCCHHHHHSCCSCC--CCCHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEES
T ss_pred             ecCCCCCCHHHHHHHHHHHHHHHHhhhCHHHHhcCCCcccccchhhhHHHhhhcCCeeeeEEEEEEcCCeeEEEEEEECC
Confidence            6532  1    25889999999999998653    122234569999999999999999999999864   378999999


Q ss_pred             CCCCCCCCCCC
Q 048073          154 PPGNYIGQKPY  164 (164)
Q Consensus       154 p~gn~~g~~~Y  164 (164)
                      | ||+.|++||
T Consensus       191 p-GN~~g~~~Y  200 (233)
T 3u3l_C          191 S-QNTRGRPVY  200 (233)
T ss_dssp             C-CCCTTSCSS
T ss_pred             C-CCCCCCcee
Confidence            8 999999998

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=100.00  E-value=2.6e-34  Score=231.82  Aligned_cols=135  Identities=32%  Similarity=0.567  Sum_probs=116.8

Q ss_pred             cCCCCchHHHHHHHHHHHhhCC-----------------CCCCCccHHHHHHHHHHHhhcccCCccccCCC----Cccce
Q 048073           25 SHAQNSPQDYLDAHNSARAAVY-----------------VPNIIWNDTVAAYAQNYSNSRIADCNLVHSGG----PYGEN   83 (164)
Q Consensus        25 ~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~----~~g~n   83 (164)
                      .+++++++.||+.||.+|+.|+                 |.+|+||++||+.||.||+    +|.+.|++.    .+|||
T Consensus       232 ~~~~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~nM~~L~Wd~~La~~Aq~~a~----~C~~~h~~~~~~~~~GeN  307 (424)
T 3nt8_A          232 GMTDSVRDTFLSVHNEFRSSVARGLEPDALGGNAPKAAKMLKMVYDCEVEASAIRHGN----KCVYQHSHGEDRPGLGEN  307 (424)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTTCSBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHT----TCCSSCCCTTTSTTCEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCCCCchhceEhHHHHHHHHHHHH----hCcccCCCccccCcccee
Confidence            4566789999999999999985                 5599999999999999999    699988763    69999


Q ss_pred             EEeecCC-----CCHHHHHHHHHhccccCCCCCCC-C------CCCcccchHHHHHHHhcCeeeEEEEEeCCCCEEEEEE
Q 048073           84 LAKGSGT-----FTGTAAVSLWVAEKANYNYSTNT-C------AAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCS  151 (164)
Q Consensus        84 ~~~~~~~-----~~~~~~v~~W~~e~~~~~~~~~~-~------~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~vC~  151 (164)
                      ++.....     ..+.++|+.||+|...|++.... +      ..+..++|||||||+++++||||++.|..+ .++||+
T Consensus       308 l~~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~-~~~VC~  386 (424)
T 3nt8_A          308 IYKTSVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKLGCAVVFCNDF-TFGVCQ  386 (424)
T ss_dssp             EEEESSTTCCHHHHHHHHHHHHHTHHHHTCCCTTCBCCHHHHTCTTCCCHHHHHHHCTTCCEEEEEEEECSSS-EEEEEE
T ss_pred             EEecccCCCchHHHHHHHHHHHHHHHHhcCCCCCcccccccccCCCCcccchHHHhhhhcceeeeEEEEeCCC-eEEEEE
Confidence            9987632     24789999999999999886533 1      134679999999999999999999999875 899999


Q ss_pred             ecCCCCCCCCCCC
Q 048073          152 YDPPGNYIGQKPY  164 (164)
Q Consensus       152 Y~p~gn~~g~~~Y  164 (164)
                      |+|+||+.|++||
T Consensus       387 Y~p~GN~~g~~~Y  399 (424)
T 3nt8_A          387 YGPGGNYMGHVIY  399 (424)
T ss_dssp             EESCCCCTTSBSS
T ss_pred             ecCCCCcCCCCCC
Confidence            9999999999998

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A

Probab=99.97  E-value=1e-31  Score=196.43  Aligned_cols=116  Identities=13%  Similarity=0.082  Sum_probs=94.8

Q ss_pred             cCCCCchHHHHHHHHHHHhhCC------------CCCCCccHHHHHHHHHHHhhcccCCccccCCCCccceEEeecC---
Q 048073           25 SHAQNSPQDYLDAHNSARAAVY------------VPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSG---   89 (164)
Q Consensus        25 ~~~~~~~~~il~~hN~~R~~~~------------m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~~~g~n~~~~~~---   89 (164)
                      .++++.++.||+.||.+|+.++            |.+|+||++||..|+.||+     |. .++. ..|||++.+++   
T Consensus        13 ~lt~~~~~~il~~HN~~R~~va~G~~~~~p~A~nM~~l~Wd~eLa~~Aq~~A~-----C~-~~~~-~~GeNl~~~sg~~~   85 (206)
T 3s6s_A           13 MVDRPFREAIDTFHNGLRQRIAKGEAEGYGPAREMYGLVYDCGLEEEARKEIK-----LP-GYAD-LHHRGVTRFSGDYE   85 (206)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHTTCSTTSCSCCCCBCCEEEHHHHHHHHHHHH-----ST-THHH-HTTCEEEEEEEECS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCCCCCCcchhhcCcCCchHHHHHHHHHhhc-----CC-CCCC-CCCcEEEEecCCCC
Confidence            4566789999999999999873            7889999999999999998     55 2222 22999965442   


Q ss_pred             CCCH--HHHHHHHHhccccCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeC----CC-CEEEEEEecCCCCCCCCC
Q 048073           90 TFTG--TAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCS----NG-WWFVTCSYDPPGNYIGQK  162 (164)
Q Consensus        90 ~~~~--~~~v~~W~~e~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~----~~-~~~~vC~Y~p~gn~~g~~  162 (164)
                      +...  .++|+.|++|               .++|||||||+++++||||++.|.    .+ .+++||+|+|+|  .|++
T Consensus        86 ~~~~~~~~av~~W~~E---------------~~gHfTQmVW~~Tt~VGCa~~~C~~~~~~~~~~~vVCnY~p~G--~g~~  148 (206)
T 3s6s_A           86 GSAISALKEILETFSA---------------DKNSMRQVVYPKATRFGCSGRLRRNKKTGMRRMDWVCVYDKKP--KDGE  148 (206)
T ss_dssp             SCHHHHHHHHHHHHTT---------------CHHHHHHHHCTTCCEEEEEEEECC-------EEEEEEEESCCC--CTTC
T ss_pred             ccchhHHHHHHHHHhh---------------hhhhHHHHHHHhhceeeEEEEEecCcCCCCceEEEEEEeCCCC--CCCC
Confidence            2223  3899999999               379999999999999999999996    22 488999999988  8999


Q ss_pred             CC
Q 048073          163 PY  164 (164)
Q Consensus       163 ~Y  164 (164)
                      ||
T Consensus       149 ~Y  150 (206)
T 3s6s_A          149 SF  150 (206)
T ss_dssp             CC
T ss_pred             Cc
Confidence            98

>4ifa_A Extracellular protein containing A SCP domain; vaccine candi virulence, pathogenesis, center for structural genomics of infectious diseases; HET: MSE; 1.50A {Bacillus anthracis}

Probab=99.61  E-value=1.5e-15  Score=118.55  Aligned_cols=93  Identities=23%  Similarity=0.326  Sum_probs=82.9

Q ss_pred             CchHHHHHHHHHHHhhCCCCCCCccHHHHHHHHHHHhhcccCCccccCCC-----------------CccceEEeecCCC
Q 048073           29 NSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGG-----------------PYGENLAKGSGTF   91 (164)
Q Consensus        29 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~-----------------~~g~n~~~~~~~~   91 (164)
                      .+.+++|++||.+|..+++++|+||..|++.|+.||+.|+.+|.+.|..+                 .+|||++.+.  .
T Consensus       219 a~e~~vl~lvN~~Ra~~Gl~pL~~d~~L~~aAq~hA~dMa~~~~fsH~~~~G~~~~~R~~~~G~~~~~~GENIA~G~--~  296 (339)
T 4ifa_A          219 GNMQQIFDLTNIIRSRHNLPLLAWDQQTADVAIGHSKDMKDNNYFSHDSPTLGTLGDRLQRGKVGFQLAGENIAAQH--S  296 (339)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCSSSBTTTBCHHHHHHHTTCCCSEEEEEEEESC--S
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHhhcCCeecCCCCCCCHHHHHHHcCCCcCceeEEEEEeC--C
Confidence            35789999999999999999999999999999999999999998888641                 3699999876  4


Q ss_pred             CHHHHHHHHHhccccCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEE
Q 048073           92 TGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARV  139 (164)
Q Consensus        92 ~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~  139 (164)
                      +...+|+.|++..                +|+++|+|+..+.+|+|+.
T Consensus       297 s~~~av~~WmnSp----------------GHr~NIL~~~~t~iGvGv~  328 (339)
T 4ifa_A          297 DGVAALQGWLNSE----------------GHRKNLLNEQFTGLGVGVY  328 (339)
T ss_dssp             SHHHHHHHHHTSH----------------HHHHHHTCTTCCEEEEEEE
T ss_pred             CHHHHHHHHhCCH----------------hHHHHHhCCCCCEEEEEEE
Confidence            6889999998733                7999999999999999986

>4h0a_A Uncharacterized protein; CAP protein family, cysteine-rich secretory proteins, struct genomics, joint center for structural genomics; 1.90A {Staphylococcus aureus subsp}

Probab=99.35  E-value=2.4e-12  Score=100.11  Aligned_cols=92  Identities=11%  Similarity=0.043  Sum_probs=75.3

Q ss_pred             chHHHHHHHHHHHhhCCCCCCCccHHHHHHHHHHHhhcccCCccccCC----------------CCccceEEeecCCCCH
Q 048073           30 SPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSG----------------GPYGENLAKGSGTFTG   93 (164)
Q Consensus        30 ~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~----------------~~~g~n~~~~~~~~~~   93 (164)
                      ..+++|++.|.+|..+|+++|+||..|+..|+.+|..|+......|.+                ...|||++.+.  .++
T Consensus       205 ~e~~il~liN~~R~~~GL~pL~~d~~L~~aA~~ha~dma~~~~~h~~~~g~~~~~R~~~~g~~~~~~gENIA~g~--~~~  282 (323)
T 4h0a_A          205 QLISLYEVTNEMRKLKGLKPLKINSDLAHIASNNLYEATSNGSDSVEFTEDALRGQLDKNHVTYKTTAQNVGYAF--NDV  282 (323)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHTC------CCCHHHHHHHHHHTTCCCSEEEEEEEESC--CSH
T ss_pred             HHHHHHHHHHHHHHHcCCcccCccHhHHHHHHHHHHHHhhCCCCCcCCCCCCHHHHHHHcCCCcCeeeeEEecCC--CCH
Confidence            346799999999999999999999999999999999998654333332                13589999876  468


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEE
Q 048073           94 TAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARV  139 (164)
Q Consensus        94 ~~~v~~W~~e~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~  139 (164)
                      ..+|+.|++..                +|..+|+.+..+.+|+|+.
T Consensus       283 ~~vv~~WmnSp----------------gHR~NiL~~~~t~iGvGv~  312 (323)
T 4h0a_A          283 PTLIHSWMNSD----------------IHRSRLLNSKYDEMGGDVM  312 (323)
T ss_dssp             HHHHHHHHTSH----------------HHHHHHTCSSCCEEEEEEE
T ss_pred             HHHHHHHHcCH----------------HHHHHHcCCCCCEEEEEEE
Confidence            99999999755                7999999999999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	164
d1cfea_	135	d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1	2e-43
d1rc9a1	164	d.111.1.1 (A:1-164) Cysteine-rich secretory protei	5e-32
d1smba_	149	d.111.1.1 (A:) Golgi-associated PR-1 protein {Huma	1e-30
d1qnxa_	209	d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jac	7e-28

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]} Length = 135

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

 Score =  138 bits (348), Expect = 2e-43
 Identities = 89/137 (64%), Positives = 108/137 (78%), Gaps = 2/137 (1%)

Query: 28  QNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKG 87
           QNSPQDYL  HN ARA V V  + W+  +A+ AQNY+NSR  DCNL+HSG   GENLAKG
Sbjct: 1   QNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSG--AGENLAKG 58

Query: 88  SGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWF 147
            G FTG AAV LWV+E+ +YNY+TN C  GK C HYTQVVWRNS+R+GC R +C+NGWWF
Sbjct: 59  GGDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWF 118

Query: 148 VTCSYDPPGNYIGQKPY 164
           ++C+YDP GN+IGQ+PY
Sbjct: 119 ISCNYDPVGNWIGQRPY 135

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]} Length = 164

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

 Score =  110 bits (275), Expect = 5e-32
 Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 13/155 (8%)

Query: 23  QTSHAQNSPQDYLDAHNSARAAVYVP-----NIIWNDTVAAYAQNYSNSRIADCNLVHS- 76
           ++        + +D HNS R +V         + W    A  A+ ++   I   +   S 
Sbjct: 7   ESPRKPEIQNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAYRCIESHSSYESR 66

Query: 77  ---GGPYGENLAKGSGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIR 133
              G   GEN+         T  +  W  E  ++ Y         V GHYTQ+VW  S R
Sbjct: 67  VIEGIKCGENIYMSPYPMKWTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYR 126

Query: 134 VGCARVQCSNGWW--FVTCSYDPPGNYIGQ--KPY 164
           +GCA   C +  +  F  C Y P GN+IG+   PY
Sbjct: 127 IGCAAAYCPSSPYSYFFVCQYCPAGNFIGKTATPY 161

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 1e-30
 Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 6/137 (4%)

Query: 32  QDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLV----HSGGPYGENLAKG 87
            + L AHN  R    VP +     +   AQ YS +  +   L      S G  GENLA  
Sbjct: 8   NEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWA 67

Query: 88  SGTFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWF 147
           S   TG      W +E  NYN+      +G   GH+T +VW+N+ ++G  +   S+G  F
Sbjct: 68  SYDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASASDGSSF 125

Query: 148 VTCSYDPPGNYIGQKPY 164
           V   Y P GN + +  +
Sbjct: 126 VVARYFPAGNVVNEGFF 142

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]} Length = 209

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

 Score =  101 bits (251), Expect = 7e-28
 Identities = 42/160 (26%), Positives = 63/160 (39%), Gaps = 27/160 (16%)

Query: 32  QDYLDAHNSARA-----------------AVYVPNIIWNDTVAAYAQNYSNSRIADCNLV 74
           QD L  HN  R                  A  + N++WND +A  AQ ++N      +  
Sbjct: 47  QDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQYGHDTC 106

Query: 75  HS--GGPYGENLAKGSGT----FTGTAAVSLWVAEKANYNYSTNTCA-AGKVCGHYTQVV 127
                   G+N+A    T          V +W  E  +YN             GHYTQ+V
Sbjct: 107 RDVAKYQVGQNVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMV 166

Query: 128 WRNSIRVGCARVQCSNGWW---FVTCSYDPPGNYIGQKPY 164
           W N+  VGC  ++     W   ++ C+Y P GN+  ++ Y
Sbjct: 167 WANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEELY 206

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	164
d1cfea_	135	Pathogenesis-related protein 1 (PR1) {Tomato (Lyco	100.0
d1smba_	149	Golgi-associated PR-1 protein {Human (Homo sapiens	100.0
d1rc9a1	164	Cysteine-rich secretory protein (SteCRISP) {Chines	100.0
d1qnxa_	209	Insect allergen 5 (AG5) {Yellow jacket (Vespula vu	100.0

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

Probab=100.00  E-value=7.1e-45  Score=250.05  Aligned_cols=135  Identities=65%  Similarity=1.256  Sum_probs=125.2

Q ss_pred             CCchHHHHHHHHHHHhhCCCCCCCccHHHHHHHHHHHhhcccCCccccCCCCccceEEeecCCCCHHHHHHHHHhccccC
Q 048073           28 QNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPYGENLAKGSGTFTGTAAVSLWVAEKANY  107 (164)
Q Consensus        28 ~~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~~~g~n~~~~~~~~~~~~~v~~W~~e~~~~  107 (164)
                      ++..+++|+.||.+|+.++|+||+||++|++.||.||++|+..|...|+  .+|||++...++.++.++++.|++|...|
T Consensus         1 ~~~~q~~l~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~~~~~~~~~~--~~GeNi~~~~~~~~~~~av~~W~~E~~~y   78 (135)
T d1cfea_           1 QNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHS--GAGENLAKGGGDFTGRAAVQLWVSERPSY   78 (135)
T ss_dssp             CCSHHHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHTTTCCSCSC--SSSBCCEECSSSCCHHHHHHHHHTTGGGE
T ss_pred             CCcHHHHHHHHHHHHHHcCCCcCEECHHHHHHHHHHHHHHhhCCCcccC--ccccceeccCCCCCHHHHHHHHHhhcccc
Confidence            4678899999999999999999999999999999999998888876665  57999998888889999999999999999


Q ss_pred             CCCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCCCCEEEEEEecCCCCCCCCCCC
Q 048073          108 NYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY  164 (164)
Q Consensus       108 ~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y  164 (164)
                      ++..+.+.....++|||||||+++++||||++.|++++.++||+|+|+||+.|++||
T Consensus        79 ~~~~~~~~~~~~~ghftQmvW~~t~~vGCa~~~c~~~~~~vVC~Y~P~GN~~g~~pY  135 (135)
T d1cfea_          79 NYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             EGGGTEECSSSCCSSHHHHHCTTCCEEEEEEEECTTSSEEEEEECSSCCSCTTSCCC
T ss_pred             ccccccCCCCcccchhheeeehhheEeeEEEEEECCCCEEEEEEEeCCCCcCCcCCC
Confidence            998887777777999999999999999999999998889999999999999999999

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-42  Score=238.00  Aligned_cols=135  Identities=32%  Similarity=0.493  Sum_probs=124.4

Q ss_pred             CCchHHHHHHHHHHHhhCCCCCCCccHHHHHHHHHHHhhcccCCccccCC----CCccceEEeecCCCCHHHHHHHHHhc
Q 048073           28 QNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSG----GPYGENLAKGSGTFTGTAAVSLWVAE  103 (164)
Q Consensus        28 ~~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~----~~~g~n~~~~~~~~~~~~~v~~W~~e  103 (164)
                      ++++++||+.||.+|..+++++|+||++|++.|+.||++|+.+|.+.|++    +.+|||++.+..+..+.++|+.|++|
T Consensus         4 ~~f~~~il~~HN~~R~~~g~~pL~wd~~La~~A~~~A~~~a~~~~~~h~~~~~~~~~geni~~~~~~~~~~~~v~~W~~e   83 (149)
T d1smba_           4 KQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYDQTGKEVADRWYSE   83 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHCCCCCCHHHHTTSSEEEEEEESSCCCHHHHHHHHHGG
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHhhcccccccccccccccccCceeeecCCCccHHHHHHHHHHH
Confidence            45799999999999999999999999999999999999999999998865    46899999888777899999999999


Q ss_pred             cccCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCCCCEEEEEEecCCCCCCCCCCC
Q 048073          104 KANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNGWWFVTCSYDPPGNYIGQKPY  164 (164)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y  164 (164)
                      ..+|+|..+.+..  .++||+||||.++++||||++.|++++.++||+|+|+||+.|+.+|
T Consensus        84 ~~~y~~~~~~~~~--~~ghftqmvw~~t~~vGCg~a~c~~~~~~~VC~Y~p~GN~~~~~~y  142 (149)
T d1smba_          84 IKNYNFQQPGFTS--GTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFF  142 (149)
T ss_dssp             GGGCCTTSCCCCG--GGHHHHHHHCTTCCEEEEEEEECTTSCEEEEEEEESCCCCCSTTHH
T ss_pred             HhhcccCCCCccc--ccchhhheecCCceEeeEEEEEcCCCCEEEEEEeeCCCCcCCcccc
Confidence            9999998877654  4899999999999999999999998779999999999999999876

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

Probab=100.00  E-value=1.2e-38  Score=225.43  Aligned_cols=138  Identities=31%  Similarity=0.627  Sum_probs=120.6

Q ss_pred             hccCCCCchHHHHHHHHHHHhhCC-----CCCCCccHHHHHHHHHHHhhcccCCccccCC--------CCccceEEeecC
Q 048073           23 QTSHAQNSPQDYLDAHNSARAAVY-----VPNIIWNDTVAAYAQNYSNSRIADCNLVHSG--------GPYGENLAKGSG   89 (164)
Q Consensus        23 ~~~~~~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~--------~~~g~n~~~~~~   89 (164)
                      ..+.+++++++||+.||.+|+.|+     |.+|+||.+|+..|+.||++    |...|+.        ..+|+|++....
T Consensus         7 ~~~~~~~~~~~il~~HN~~R~~~~~~a~~m~~L~Wd~~La~~A~~~a~~----c~~~~~~~~~~~~~~~~~g~n~~~~~~   82 (164)
T d1rc9a1           7 ESPRKPEIQNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAYR----CIESHSSYESRVIEGIKCGENIYMSPY   82 (164)
T ss_dssp             GCTTSHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHTT----TCCSCCCGGGGEETTEECEEEEEEESS
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHcCCCcccccccccCHHHHHHHHHHHHH----HhhccCCcccccccccccceEEEEecC
Confidence            345567799999999999999996     77799999999999999995    6655443        267999988777


Q ss_pred             CCCHHHHHHHHHhccccCCCCCCCCCCCcccchHHHHHHHhcCeeeEEEEEeCCC--CEEEEEEecCCCCCCCC--CCC
Q 048073           90 TFTGTAAVSLWVAEKANYNYSTNTCAAGKVCGHYTQVVWRNSIRVGCARVQCSNG--WWFVTCSYDPPGNYIGQ--KPY  164 (164)
Q Consensus        90 ~~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~--~~~~vC~Y~p~gn~~g~--~~Y  164 (164)
                      +..+.++|+.|++|..+|++....+..+..++|||||||+++++||||++.|.++  +.++||+|+|+||+.|+  .||
T Consensus        83 ~~~~~~~v~~W~~E~~~~~~~~~~~~~~~~~ghftqmvW~~t~~vGCa~~~c~~~~~~~~vVC~Y~P~GN~~g~~~~~Y  161 (164)
T d1rc9a1          83 PMKWTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYRIGCAAAYCPSSPYSYFFVCQYCPAGNFIGKTATPY  161 (164)
T ss_dssp             CCCHHHHHHHHHGGGGGEETTTEESSTTCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTCTTCSS
T ss_pred             CCCHHHHHHHHhhhhheeecCCCCCCCcchhhHHHHHhhhcccEEeEEEEEeCCCCceEEEEEEEcCCCccCCCcCCCc
Confidence            7789999999999999999998877777789999999999999999999999875  47899999999999997  456

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

Probab=100.00  E-value=1.1e-36  Score=222.81  Aligned_cols=136  Identities=30%  Similarity=0.564  Sum_probs=115.1

Q ss_pred             cCCCCchHHHHHHHHHHHhhCC-----------------CCCCCccHHHHHHHHHHHhhcccCCccccCC------CCcc
Q 048073           25 SHAQNSPQDYLDAHNSARAAVY-----------------VPNIIWNDTVAAYAQNYSNSRIADCNLVHSG------GPYG   81 (164)
Q Consensus        25 ~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~------~~~g   81 (164)
                      .+++++|+.||+.||.+|+.++                 |.+|+||++||..|+.||++    |...|+.      ..+|
T Consensus        40 ~~t~~~r~~iL~~HN~~R~~vA~G~~~~~~~~~~P~A~~M~~L~Wd~eLa~~A~~~a~~----C~~~~~~~~~~~~~~~G  115 (209)
T d1qnxa_          40 GLTKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQ----CQYGHDTCRDVAKYQVG  115 (209)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHHTT----CCCSCCSCCCCSSSCCE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcccccccccCCCCccccCccceECHHHHHHHHHHHhh----cccCCCcccCCCCCCCc
Confidence            3466799999999999999862                 88899999999999999995    7766543      2679


Q ss_pred             ceEEeecC----CCCHHHHHHHHHhccccCCCCCCCCCC-CcccchHHHHHHHhcCeeeEEEEEeCCC---CEEEEEEec
Q 048073           82 ENLAKGSG----TFTGTAAVSLWVAEKANYNYSTNTCAA-GKVCGHYTQVVWRNSIRVGCARVQCSNG---WWFVTCSYD  153 (164)
Q Consensus        82 ~n~~~~~~----~~~~~~~v~~W~~e~~~~~~~~~~~~~-~~~~~~f~q~iw~~~~~vGCa~~~c~~~---~~~~vC~Y~  153 (164)
                      ||++....    ...+.++|+.|++|...|++....... +..++|||||||+++++||||++.|..+   +.++||+|+
T Consensus       116 en~~~~~~~~~~~~~~~~~v~~W~~E~~~~~~~~~~~~~~~~~~ghftQmvw~~t~~VGCa~~~c~~~~~~~~~vVC~Y~  195 (209)
T d1qnxa_         116 QNVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYG  195 (209)
T ss_dssp             EEEEEEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             ceeeecccCCcCcccHHHHHHHHHHHhhhcCCCcccccCCccccchhHHHhhhhhCEEeEEEEEEcCCCCCEEEEEEEEC
Confidence            99987552    246889999999999999987755433 3569999999999999999999999865   378999999


Q ss_pred             CCCCCCCCCCC
Q 048073          154 PPGNYIGQKPY  164 (164)
Q Consensus       154 p~gn~~g~~~Y  164 (164)
                      |+||+.|++||
T Consensus       196 p~GN~~g~~~Y  206 (209)
T d1qnxa_         196 PSGNFKNEELY  206 (209)
T ss_dssp             SCCCCTTSCSS
T ss_pred             CCCCCCCCCCC
Confidence            99999999999