Citrus Sinensis ID: 048079


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
MSVNWNCQSFDYPTAKLSTKWVNSPSAPHSVAFTDGSTVRAILLRGTFGPRYACGFFCNGACDTYLFAVFIVQTNSASSIVAPAIGFPQVVWAANRNNPVRINATLELTSPWSTNTNGKSVVGLTLTDTGNLVLFNKKNAAVWQSFDHPTDSLVPGQKLVEGKKLTASVSTTNWKDGGLFSLSVTKKGLFASIESNNTP
ccEEEEcccccccccccccEEEEcccccccEEEccccEEEEcccccccccEEEEEEccccccccEEEEEEEEEccccccccccccccccEEEEcccccccccccEEEEEEEEEcccccccEEEEEEEccccEEEEcccccEEEEcccccccccccccccccccEEEEEEEEEEccccccEEEEEcccccEEEEEccccc
ccccccccccccccccccEEEEcccccccccccccccEEcEEEEEcccccEEEEEEEcccccccEEEEEEEEEcccccccEEccccccEEEEEEcccccccccEEEEcccEEEccccccccEEEEEcccccEEEEEccccEEEEEccccccccccccEcccccEEEEccccccccccccEEEEEccccccHEEEccccc
msvnwncqsfdyptaklstkwvnspsaphsvaftdgSTVRAILLrgtfgpryacgffcngacDTYLFAVFIVQtnsassivapaigfPQVVWaanrnnpvrINATLeltspwstntngksvvgltltdtgnlvlfnKKNAavwqsfdhptdslvpgqklvegkkltasvsttnwkdgglfslsvtkkglfASIESNNTP
msvnwncqsfdyPTAKLSTKWVNSPSAPHSVAFTDGSTVRAILLRGTFGPRYACGFFCNGACDTYLFAVFIVQTNSASSIVAPAIGFPQVVWAANRNNPVRINATleltspwstntngKSVVGLTLTDTGNLVLFNKKNAAVWQSFDHPTDSLVPGQKLVEGKKLTasvsttnwkdgglfslsvtkkglfasiesnntp
MSVNWNCQSFDYPTAKLSTKWVNSPSAPHSVAFTDGSTVRAILLRGTFGPRYACGFFCNGACDTYLFAVFIVQTNSASSIVAPAIGFPQVVWAANRNNPVRINATLELTSPWSTNTNGKSVVGLTLTDTGNLVLFNKKNAAVWQSFDHPTDSLVPGQKLVEGKKLTASVSTTNWKDGGLFSLSVTKKGLFASIESNNTP
****WNCQSFDYPTAKLSTKWVNS**APHSVAFTDGSTVRAILLRGTFGPRYACGFFCNGACDTYLFAVFIVQTNSASSIVAPAIGFPQVVWAANRNNPVRINATLELTSPWSTNTNGKSVVGLTLTDTGNLVLFNKKNAAVWQSFDHPTDSLVPGQKLVEGKKLTASVSTTNWKDGGLFSLSVTKKGLF*********
***NW*CQSFDYPTAKLSTKWVNSPSAPHSV*FTDG**VRAILLRGTFGPRYACGFFCNGACDTYLFAVFIVQTNSASSIVAPAIGFPQVVWAANRNNPVRINATLELTSPWSTNTNGKSVVGLTLTDTGNLVLFNKKNAAVWQSFDHPTDSLVPGQKLVEGKKLTASVSTTNWKDGGLFSLSVTKKGLFASIESN***
MSVNWNCQSFDYPTAKLSTKWVNSPSAPHSVAFTDGSTVRAILLRGTFGPRYACGFFCNGACDTYLFAVFIVQTNSASSIVAPAIGFPQVVWAANRNNPVRINATLELTSPWSTNTNGKSVVGLTLTDTGNLVLFNKKNAAVWQSFDHPTDSLVPGQKLVEGKKLTASVSTTNWKDGGLFSLSVTKKGLFASIESNNTP
*SV*WNCQSFDYPTAKLSTKWVNSPSAPHSVAFTDGSTVRAILLRGTFGPRYACGFFCNGACDTYLFAVFIVQTNSASSIVAPAIGFPQVVWAANRNNPVRINATLELTSPWSTNTNGKSVVGLTLTDTGNLVLFNKKNAAVWQSFDHPTDSLVPGQKLVEGKKLTASVSTTNWKDGGLFSLSVTKKGLFASIESN***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSVNWNCQSFDYPTAKLSTKWVNSPSAPHSVAFTDGSTVRAILLRGTFGPRYACGFFCNGACDTYLFAVFIVQTNSASSIVAPAIGFPQVVWAANRNNPVRINATLELTSPWSTNTNGKSVVGLTLTDTGNLVLFNKKNAAVWQSFDHPTDSLVPGQKLVEGKKLTASVSTTNWKDGGLFSLSVTKKGLFASIESNNTP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query199 2.2.26 [Sep-21-2011]
O65238 872 G-type lectin S-receptor- no no 0.773 0.176 0.306 5e-14
Q8RWZ5 821 G-type lectin S-receptor- no no 0.427 0.103 0.378 8e-13
Q39688 389 Epidermis-specific secret N/A no 0.542 0.277 0.387 3e-12
Q9ZT07 833 G-type lectin S-receptor- no no 0.597 0.142 0.293 3e-10
Q9FLV4 872 G-type lectin S-receptor- no no 0.618 0.141 0.291 2e-09
P0DH86 853 G-type lectin S-receptor- no no 0.427 0.099 0.403 2e-08
Q39086 843 Receptor-like serine/thre no no 0.427 0.100 0.366 3e-08
P0DH87 546 Putative inactive G-type no no 0.427 0.155 0.403 6e-08
O81905 850 Receptor-like serine/thre no no 0.532 0.124 0.343 8e-08
Q39203 797 G-type lectin S-receptor- no no 0.407 0.101 0.359 2e-07
>sp|O65238|Y5537_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana GN=At5g35370 PE=2 SV=2 Back     alignment and function desciption
 Score = 77.4 bits (189), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 56/183 (30%), Positives = 86/183 (46%), Gaps = 29/183 (15%)

Query: 10  FDYPTAKLSTKWVNSPSAPHSVAFTDGSTVRAILLRGTFGPRYACGFFCNGACDTYL-FA 68
           F + +   S ++V       ++ F D S    +L R +    +  G F  G  D+   F 
Sbjct: 18  FVFVSCASSIEFVYPNFTASNLRFVDSSKGAFLLSRNSI---FKAGLFSPGGDDSSTGFY 74

Query: 69  VFIVQTNSASSIVAPAIGFPQVVWAANRNNPVRINATLELTSP--------------WST 114
             +V  +S S+I           W++NR++PV  + T+ LT                WST
Sbjct: 75  FSVVHVDSGSTI-----------WSSNRDSPVSSSGTMNLTPQGISVIEDGKSQIPVWST 123

Query: 115 NTNGKSVVGLTLTDTGNLVLFNKKNAAVWQSFDHPTDSLVPGQKLVEGKKLTASVSTTNW 174
                 V  L LTD GNL+L +  N ++W+SFD PTDS+V GQ+L  G  L+ SVS +++
Sbjct: 124 PVLASPVKSLRLTDAGNLLLLDHLNVSLWESFDFPTDSIVLGQRLKLGMFLSGSVSRSDF 183

Query: 175 KDG 177
             G
Sbjct: 184 STG 186





Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1
>sp|Q8RWZ5|SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana GN=SD25 PE=1 SV=1 Back     alignment and function description
>sp|Q39688|EP1G_DAUCA Epidermis-specific secreted glycoprotein EP1 OS=Daucus carota GN=EP1 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZT07|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=2 SV=3 Back     alignment and function description
>sp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1 Back     alignment and function description
>sp|P0DH86|SRK_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=SRK PE=2 SV=1 Back     alignment and function description
>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1 Back     alignment and function description
>sp|P0DH87|PSRK_ARATH Putative inactive G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=PSEUDOSRKA PE=5 SV=1 Back     alignment and function description
>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1 Back     alignment and function description
>sp|Q39203|SD22_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 OS=Arabidopsis thaliana GN=SD22 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query199
255569833 837 serine-threonine protein kinase, plant-t 0.959 0.228 0.710 2e-79
338190111 830 lectin-domain receptor-like kinase [Nico 0.949 0.227 0.722 4e-78
255569831 457 S-locus-specific glycoprotein precursor, 0.959 0.417 0.715 5e-78
255569825 870 serine-threonine protein kinase, plant-t 0.934 0.213 0.570 4e-62
116309112 838 OSIGBa0157N01.3 [Oryza sativa Indica Gro 0.939 0.223 0.531 2e-54
125547684 863 hypothetical protein OsI_15301 [Oryza sa 0.939 0.216 0.526 5e-54
116308953 864 H0215E01.7 [Oryza sativa Indica Group] 0.939 0.216 0.521 1e-53
357160794 846 PREDICTED: G-type lectin S-receptor-like 0.939 0.221 0.546 3e-53
70663992 864 OSJNBb0018A10.15 [Oryza sativa Japonica 0.939 0.216 0.517 3e-53
38344588 838 OSJNBa0079M09.4 [Oryza sativa Japonica G 0.939 0.223 0.526 1e-51
>gi|255569833|ref|XP_002525880.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223534794|gb|EEF36484.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  300 bits (767), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 145/204 (71%), Positives = 161/204 (78%), Gaps = 13/204 (6%)

Query: 6   NCQSFDYPTAKLSTKWVNSPSAPHSVAFTDGSTVRAILLRGTFGPRYACGFFCNGACDTY 65
           N ++FDYP+A LST W NSPS PHS+ FTDGSTVRAILLRGTFGPR+ACGFFCNG CD+Y
Sbjct: 25  NAETFDYPSANLSTSWRNSPSLPHSIEFTDGSTVRAILLRGTFGPRFACGFFCNGTCDSY 84

Query: 66  LFAVFIVQTNSASSIVAPAIGFPQVVWAANRNNPVRINATLELTS-------------PW 112
           LFA+FIVQTNSAS I +PAIGFPQVVW+ANRNNPVRINATL+ TS              W
Sbjct: 85  LFAIFIVQTNSASYITSPAIGFPQVVWSANRNNPVRINATLQFTSGGDLILKDVDGTIAW 144

Query: 113 STNTNGKSVVGLTLTDTGNLVLFNKKNAAVWQSFDHPTDSLVPGQKLVEGKKLTASVSTT 172
           STNT  KSV GL LTD GNLVLF+ K+  VWQSFDHPTDSLVPGQKLV GKKL  SVS T
Sbjct: 145 STNTADKSVAGLNLTDMGNLVLFDDKDRVVWQSFDHPTDSLVPGQKLVSGKKLIPSVSAT 204

Query: 173 NWKDGGLFSLSVTKKGLFASIESN 196
           NW    L  +SVT +G+FAS+ESN
Sbjct: 205 NWTQLSLLLISVTDEGMFASVESN 228




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|338190111|gb|AEI84329.1| lectin-domain receptor-like kinase [Nicotiana attenuata] Back     alignment and taxonomy information
>gi|255569831|ref|XP_002525879.1| S-locus-specific glycoprotein precursor, putative [Ricinus communis] gi|223534793|gb|EEF36483.1| S-locus-specific glycoprotein precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255569825|ref|XP_002525876.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223534790|gb|EEF36480.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|116309112|emb|CAH66217.1| OSIGBa0157N01.3 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|125547684|gb|EAY93506.1| hypothetical protein OsI_15301 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|116308953|emb|CAH66079.1| H0215E01.7 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|357160794|ref|XP_003578878.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5-like isoform 1 [Brachypodium distachyon] gi|357160797|ref|XP_003578879.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5-like isoform 2 [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|70663992|emb|CAE04686.2| OSJNBb0018A10.15 [Oryza sativa Japonica Group] gi|125589793|gb|EAZ30143.1| hypothetical protein OsJ_14197 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|38344588|emb|CAE05335.2| OSJNBa0079M09.4 [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query199
TAIR|locus:2037548 455 AT1G78830 [Arabidopsis thalian 0.542 0.237 0.435 7.9e-18
TAIR|locus:2037563 455 AT1G78820 [Arabidopsis thalian 0.572 0.250 0.415 4.6e-17
TAIR|locus:2037568 443 AT1G78860 [Arabidopsis thalian 0.547 0.246 0.365 1.1e-13
TAIR|locus:2037508 441 AT1G78850 [Arabidopsis thalian 0.547 0.247 0.357 2.2e-13
UNIPROTKB|Q39688 389 EP1 "Epidermis-specific secret 0.542 0.277 0.387 5.8e-13
TAIR|locus:2116525 821 SD2-5 "S-domain-2 5" [Arabidop 0.517 0.125 0.333 1.4e-12
TAIR|locus:2182603 872 AT5G35370 [Arabidopsis thalian 0.773 0.176 0.311 1.9e-12
TAIR|locus:4010713447 423 AT1G16905 [Arabidopsis thalian 0.412 0.193 0.422 6.5e-11
TAIR|locus:2026155 829 AT1G34300 [Arabidopsis thalian 0.653 0.156 0.293 1.1e-07
TAIR|locus:2018546 843 RK1 "receptor kinase 1" [Arabi 0.427 0.100 0.376 1.9e-07
TAIR|locus:2037548 AT1G78830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 223 (83.6 bits), Expect = 7.9e-18, P = 7.9e-18
 Identities = 54/124 (43%), Positives = 66/124 (53%)

Query:    91 VWAANRNNPVRINATLELTS-------------PWSTNTNGKSVVGLTLTDTGNLVLFNK 137
             +W ANRNNPV  NATL L                W TNT  K V G  +   GN+VL +K
Sbjct:    94 IWDANRNNPVGENATLSLGRNGNLVLAEADGRVKWQTNTANKGVTGFQILPNGNIVLHDK 153

Query:   138 KNAAVWQSFDHPTDSLVPGQKL-VEG-KKLTASVSTTNWKDGGLFSLSVTKKGLFASIES 195
                 VWQSFDHPTD+L+ GQ L V G  KL +  S +N  DG  +S+ + KKGL   +  
Sbjct:   154 NGKFVWQSFDHPTDTLLTGQSLKVNGVNKLVSRTSDSNGSDGP-YSMVLDKKGLTMYVNK 212

Query:   196 NNTP 199
               TP
Sbjct:   213 TGTP 216




GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0030246 "carbohydrate binding" evidence=IEA;ISS
GO:0005618 "cell wall" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2037563 AT1G78820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037568 AT1G78860 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037508 AT1G78850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q39688 EP1 "Epidermis-specific secreted glycoprotein EP1" [Daucus carota (taxid:4039)] Back     alignment and assigned GO terms
TAIR|locus:2116525 SD2-5 "S-domain-2 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182603 AT5G35370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:4010713447 AT1G16905 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026155 AT1G34300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
OsI_15301
Os04g0303500 (863 aa)
(Oryza sativa Indica)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query199
pfam01453109 pfam01453, B_lectin, D-mannose binding lectin 5e-18
cd00028116 cd00028, B_lectin, Bulb-type mannose-specific lect 3e-14
smart00108114 smart00108, B_lectin, Bulb-type mannose-specific l 1e-13
>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin Back     alignment and domain information
 Score = 75.4 bits (186), Expect = 5e-18
 Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 15/85 (17%)

Query: 90  VVWAANRNNPVRI-NATLELTSP-------------WSTNTNGK-SVVGLTLTDTGNLVL 134
           VVW ANR NP+   + TL L S              WS+NT+GK S     L D GNLVL
Sbjct: 4   VVWVANRLNPLTDSSYTLILQSDGNLVLYDGNGRVVWSSNTSGKGSGCVAVLQDDGNLVL 63

Query: 135 FNKKNAAVWQSFDHPTDSLVPGQKL 159
           ++     +WQSFDHPTD+L+PGQK 
Sbjct: 64  YDNSGKVLWQSFDHPTDTLLPGQKD 88


These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109

>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin Back     alignment and domain information
>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 199
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 99.88
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 99.84
smart00108114 B_lectin Bulb-type mannose-specific lectin. 99.81
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 97.76
smart00108114 B_lectin Bulb-type mannose-specific lectin. 97.64
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 95.86
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information
Probab=99.88  E-value=9.6e-24  Score=162.98  Aligned_cols=88  Identities=51%  Similarity=0.799  Sum_probs=60.0

Q ss_pred             CcEEEEecCCCcccc---Cceeeeee-------------eeec-CCCCCc--eeEEEEccCCCeEEeecCCceEEeccCC
Q 048079           88 PQVVWAANRNNPVRI---NATLELTS-------------PWST-NTNGKS--VVGLTLTDTGNLVLFNKKNAAVWQSFDH  148 (199)
Q Consensus        88 ~tvVW~ANr~~Pv~~---~s~L~lt~-------------vWst-~~~~~~--~~~~~LldsGNLVL~~~~~~vlWQSFd~  148 (199)
                      ++|||+|||+.|+..   .++|.|+.             +|++ ++.+.+  ...|+|+|+|||||++..+.+|||||||
T Consensus         2 ~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~Sf~~   81 (114)
T PF01453_consen    2 RTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQSFDY   81 (114)
T ss_dssp             --------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEESTTS
T ss_pred             cccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEeecCC
Confidence            689999999999943   36676664             8999 556544  7789999999999999888999999999


Q ss_pred             CcCcccCCccccCC------CEEEEeeCCCCCC
Q 048079          149 PTDSLVPGQKLVEG------KKLTASVSTTNWK  175 (199)
Q Consensus       149 PTDTlLPGq~L~~~------~~L~S~~s~~d~s  175 (199)
                      |+||+||+|+|+.+      ..|++|++.+||+
T Consensus        82 ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   82 PTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             SS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             CccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            99999999999873      2489999998875



Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query199
1kj1_A109 Lectin I, lecgna 1; BULB lectin, mannose, plant pr 4e-06
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 2e-05
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 3e-05
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 7e-04
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 4e-05
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 5e-05
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 3e-04
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 6e-05
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 2e-04
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 2e-04
1dlp_A 236 Lectin scafet precursor; two-domain lectin, beta p 3e-04
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 6e-04
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 6e-04
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 9e-04
>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109 Back     alignment and structure
 Score = 43.3 bits (102), Expect = 4e-06
 Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 17/74 (22%)

Query: 89  QVVWAANRNNPVRINATLELTS-------------PWSTNTNGKS-VVGLTLTDTGNLVL 134
             VWA+N     +      L S              W++++   +    L L + GN+V+
Sbjct: 38  TSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVI 97

Query: 135 FNKKNAAVWQSFDH 148
           +    + +W +  +
Sbjct: 98  Y---GSDIWSTGTY 108


>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119 Back     alignment and structure
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 Back     alignment and structure
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110 Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110 Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110 Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109 Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113 Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109 Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query199
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 99.96
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 99.89
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 99.54
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 99.41
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 99.36
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 99.33
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 99.33
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 99.03
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 98.67
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 98.59
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 98.41
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 98.38
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 98.27
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 98.14
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 98.1
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 98.0
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 97.95
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 97.93
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 97.84
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 97.81
1dlp_A 236 Lectin scafet precursor; two-domain lectin, beta p 97.78
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 97.77
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 97.65
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 96.7
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Back     alignment and structure
Probab=99.96  E-value=4.4e-29  Score=217.12  Aligned_cols=133  Identities=25%  Similarity=0.390  Sum_probs=107.9

Q ss_pred             CCCCCccccCCCceEEEeeeeCCCCCeEEeeeecCCCCCceEEEEEEEeccCCCccccCCCCCCcEEEEecCCCcccc--
Q 048079           25 PSAPHSVAFTDGSTVRAILLRGTFGPRYACGFFCNGACDTYLFAVFIVQTNSASSIVAPAIGFPQVVWAANRNNPVRI--  102 (199)
Q Consensus        25 ~s~~~~~~~~dg~~~~~~l~~~S~~g~F~lGFf~~~~~~~~~lgIw~~~~n~~~~~~~~~~~~~tvVW~ANr~~Pv~~--  102 (199)
                      ++|..+..+.+|++++      |++|.|+||||..  + +.|+   |.             +.+ +||+|||+.||.+  
T Consensus        15 ~~l~~g~~l~~~~~l~------S~~g~F~lgf~~~--~-~~~l---y~-------------~~~-vvW~Anr~~p~~~~~   68 (276)
T 3m7h_A           15 SVLPAYQTLSAGQYLL------SPNQRFKLLLQGD--G-NLVI---QD-------------NGA-TVWVANEQQPFSSTI   68 (276)
T ss_dssp             SEECTTEEBCTTCEEE------CTTSSEEEEECTT--S-CEEE---EE-------------TTE-EEEECSTTSTTEEEE
T ss_pred             CEecCCCEecCCCEEE------cCCCcEEEEEECC--C-CeEE---EC-------------CCC-eEEECCCCCCcCCcc
Confidence            5677888888898888      8999999999943  3 4444   43             245 9999999999866  


Q ss_pred             ---Cceeeeee---------------eeecCCCC------CceeEEEEccCCCeEEeecCCceEEeccCCCcCcccCCcc
Q 048079          103 ---NATLELTS---------------PWSTNTNG------KSVVGLTLTDTGNLVLFNKKNAAVWQSFDHPTDSLVPGQK  158 (199)
Q Consensus       103 ---~s~L~lt~---------------vWst~~~~------~~~~~~~LldsGNLVL~~~~~~vlWQSFd~PTDTlLPGq~  158 (199)
                         .++|+|+.               ||++++..      ..+..|+|+|+|||||++  +.+||||  |||||+||||+
T Consensus        69 ~~~~~~l~l~~~G~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~--~~~lWqS--~ptdtlLpg~~  144 (276)
T 3m7h_A           69 PLRNKKAPLAFYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD--SLALWNG--TPAIPLVPGAI  144 (276)
T ss_dssp             ECCCTTCCSEEEESSSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE--EEEEEES--CTTSCCCCSCT
T ss_pred             cccceEEEEeCCCcEEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC--CceeeCc--ccccccccccc
Confidence               44444432               89999865      345789999999999998  7799999  99999999999


Q ss_pred             ----ccCCCEEEEeeCCCCCCCceeEEEEEeCCCceE
Q 048079          159 ----LVEGKKLTASVSTTNWKDGGLFSLSVTKKGLFA  191 (199)
Q Consensus       159 ----L~~~~~L~S~~s~~d~s~~G~fsl~l~~~g~~~  191 (199)
                          |..|++|   ++..|+++ |.|+++|+++|...
T Consensus       145 ~~~~l~~g~~L---~S~~dps~-G~fsl~l~~dGnlv  177 (276)
T 3m7h_A          145 DSLLLAPGSEL---VQGVVYGA-GASKLVFQGDGNLV  177 (276)
T ss_dssp             TCEEECSSEEE---CTTCEEEE-TTEEEEECTTSCEE
T ss_pred             cccccccCccc---ccCCCCCC-ceEEEeecCCceEE
Confidence                7788888   55678998 99999999998543



>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 199
d1kj1a_109 b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium 2e-08
d1xd5a_112 b.78.1.1 (A:) Gastrodianin (antifungal protein) {G 5e-06
d1dlpa2120 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet 9e-06
d1dlpa1115 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p 2e-05
d1jpca_108 b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan 1e-04
d1b2pa_119 b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill 0.003
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109 Back     information, alignment and structure

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]
 Score = 48.0 bits (114), Expect = 2e-08
 Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 17/73 (23%)

Query: 90  VVWAANRNNPVRINATLELTS-------------PWSTNTN-GKSVVGLTLTDTGNLVLF 135
            VWA+N     +      L S              W++++  G     L L + GN+V++
Sbjct: 39  SVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIY 98

Query: 136 NKKNAAVWQSFDH 148
               + +W +  +
Sbjct: 99  ---GSDIWSTGTY 108


>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112 Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120 Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115 Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108 Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query199
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 99.45
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 99.32
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 99.28
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 99.2
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 98.89
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 98.61
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 98.01
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 97.89
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 97.84
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 97.77
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 97.08
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 97.05
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure
class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]
Probab=99.45  E-value=2e-13  Score=101.37  Aligned_cols=99  Identities=19%  Similarity=0.359  Sum_probs=74.0

Q ss_pred             CCCCCccccCCCceEEEeeeeCCCCCeEEeeeecCCCCCceEEEEEEEeccCCCccccCCCCCCcEEEEecCCCcccc--
Q 048079           25 PSAPHSVAFTDGSTVRAILLRGTFGPRYACGFFCNGACDTYLFAVFIVQTNSASSIVAPAIGFPQVVWAANRNNPVRI--  102 (199)
Q Consensus        25 ~s~~~~~~~~dg~~~~~~l~~~S~~g~F~lGFf~~~~~~~~~lgIw~~~~n~~~~~~~~~~~~~tvVW~ANr~~Pv~~--  102 (199)
                      +.|..++.+..|..+.        +|.|+|.|+..++     |.++  .             ..++||.|+++.+...  
T Consensus         2 DtL~~gq~L~~g~~l~--------~g~~~l~~q~DGN-----Lvly--~-------------~~~~vW~s~~~~~~~~~~   53 (112)
T d1xd5a_           2 DRLNSGHQLDTGGSLA--------EGGYLFIIQNDCN-----LVLY--D-------------NNRAVWASGTNGKASGCV   53 (112)
T ss_dssp             CEEETTEEECTTCEEE--------ETTEEEEECTTSC-----EEEE--E-------------TTEEEEECCCTTSCSSEE
T ss_pred             CEecCCCEecCCCEEE--------ECCEEEEEcCCCC-----EEEE--c-------------CCcEEEEccCccCCCCcE
Confidence            4567788888999876        6999999987653     2333  1             2579999999876432  


Q ss_pred             -----Cceeeeee----eeecCCCCC-ceeEEEEccCCCeEEeecCCceEEeccCCCcC
Q 048079          103 -----NATLELTS----PWSTNTNGK-SVVGLTLTDTGNLVLFNKKNAAVWQSFDHPTD  151 (199)
Q Consensus       103 -----~s~L~lt~----vWst~~~~~-~~~~~~LldsGNLVL~~~~~~vlWQSFd~PTD  151 (199)
                           .+.|.|..    +|++++... +...++|+|+|||||++.++.++|||+.+|+|
T Consensus        54 l~l~~dGnLvl~~~~~~~w~s~t~~~~~~~~l~L~ddGNlvly~~~~~~~W~S~t~~~n  112 (112)
T d1xd5a_          54 LKMQNDGNLVIYSGSRAIWASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWATHTNVGN  112 (112)
T ss_dssp             EEECTTSCEEEEETTEEEEECCCCCSCCCCEEEECTTSCEEEECTTSCEEEECCCCCCC
T ss_pred             EEEeccccEEEEecCCeEEEEeeccCCCceEEEEcCCCCEEEECCCCcEEecCCCccCC
Confidence                 13344433    888776543 45678999999999999988999999999986



>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure