Citrus Sinensis ID: 048106

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690----
MSSSDPKTRPKPGPWPPAPDATPVPPSSWAKRTGFRPKFSGETNASDSGQISLPPKPREPVNQPDLEAGRARATPPPAPVPAPASSQALANGDGEKVPALVAPTNKDQTVKRRRDSDKGLSMNGNGHGNGNGSGPAGPTERNQHPQPQPRRAPRNEEMVVVDGMDDDGFTSRHSHMKYQLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFKHIMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTCLEIGVVQILLVILFSLYLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTLLSLHVVVAFLFAVVLDNTVPGSRQERGVYEWSETEAARREPAIAKDYELPFRVGRVFRWVKWVGL
ccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEHHHHHHHccccHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHcHHccccccccccccccccccccccccccccc
cccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccccccccccHcHHEHEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcEEEcccccHHEEEEEHHHHHHHHcHHHHHHccccccccccccccccHHcccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHccccccHHHcccHHHccccccccccccccHccccccHHHHHEEEEEccc
msssdpktrpkpgpwppapdatpvppsswakrtgfrpkfsgetnasdsgqislppkprepvnqpdleagraratpppapvpapassqalangdgekvpalvaptnkdqtvkrrrdsdkglsmngnghgngngsgpagpternqhpqpqprraprneemvvvdgmdddgftsrhshmkyqlrdtpglvpigLYGFQHYLSMLGsliliplvivpamggshedtsnVVSTVLFVSGVTTLLHTFfgsrlpliqgssfnFKHIMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGlsfysygfplvgTCLEIGVVQILLVILFSLYLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTEtgaynykecdvnvpvsniiSEHCRKHVsrmkqcrvdsshalksspwfrfpyplqwgtpvfhWKMAVVMCVVSVIASVDSVGSYHASSLlvasrpptpgvvsrAIGLEGLCSVLAGlwgtgtgsttltENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSnlryseagssrNIIIVGLSLFfslsipayfqqygispntnlsvpsyfqpysvashgpfrskyggvnYVMNTLLSLHVVVAFLFAVVLdntvpgsrqergvyewseteaarrepaiakdyelpfrvgrVFRWVKWVGL
msssdpktrpkpgpwppapdatpvppsSWAKRTGFRPKfsgetnasdsgqislppkprEPVNQPDLEAGRARATPPPAPVPAPASSQALANGDgekvpalvaptnkdqtvkrrrdsdkglsmngnghgngngSGPAGPTERNQhpqpqprraprneeMVVVDGMDDDGFTSRHSHMKYQLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFKHIMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTCLEIGVVQILLVILFSLYLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTgtgsttlteNVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTLLSLHVVVAFLFAVVLDntvpgsrqergvyewseteaarrepaiakdyelpfrvgrVFRWVKWVGL
MSSSdpktrpkpgpwppapdatpvppSSWAKRTGFRPKFSGETNASDSGQISLPPKPREPVNQPDLEagraratpppapvpapaSSQALANGDGEKVPALVAPTNKDQTVKRRRDSDKGLSMngnghgngngsgpagPTernqhpqpqprraprneemvvvdgmdddgFTSRHSHMKYQLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFKHIMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTCLEIGVVQILLVILFSLYLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKmavvmcvvsviasvDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVlaglwgtgtgsttltENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTllslhvvvaflfavvlDNTVPGSRQERGVYEWSETEAARREPAIAKDYELPFRVGRVFRWVKWVGL
*******************************************************************************************************************************************************************************MKYQLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFKHIMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTCLEIGVVQILLVILFSLYLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLS************IIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTLLSLHVVVAFLFAVVLDNTVPGSRQERGVYEWSETEAARREPAIAKDYELPFRVGRVFRWVKWV**
****************************WAKRTGF***********************************************************************************************************************************************QLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFKHIMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTCLEIGVVQILLVILFSLYLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPP*PGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTLLSLHVVVAFLFAVVLDNTVPGSRQERGVYEW**************DYELPFRVGRVFRWVKWVGL
***************PPAPDATPVPPSSWAKRTGFRPKFS***********SLPPKPREPVNQPDLE************************GDGEKVPALVAPTN************KGLSMNGNGHGNG************************NEEMVVVDGMDDDGFTSRHSHMKYQLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFKHIMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTCLEIGVVQILLVILFSLYLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTLLSLHVVVAFLFAVVLDNTVPGSRQERGVYEWSETEAARREPAIAKDYELPFRVGRVFRWVKWVGL
*************P**************************************************************************************************************************************************************HSHMKYQLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFKHIMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTCLEIGVVQILLVILFSLYLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTLLSLHVVVAFLFAVVLDNTVPGSRQERGVYEWSETEAARREPAIAKDYELPFRVGRVFRWVKWVGL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MSSSDPKTRPKPGPWPPAPDATPVPPSSWAKRTGFRPKFSGETNASDSGQISLPPKPREPVNQPDLEAGRARATPPPAPVPAPASSQALANGDGEKVPALVAPTNKDQTVKRRRDSDKGLSMNGNGHGNGNGSGPAGPTERNQHPQPQPRRAPRNEEMVVVDGMDDDGFTSRHSHMKYQLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFKHIMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTCLEIGVVQILLVILFSLYLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTLLSLHVVVAFLFAVVLDNTVPGSRQERGVYEWSETEAARREPAIAKDYELPFRVGRVFRWVKWVGL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query694 2.2.26 [Sep-21-2011]
Q3E7D0709 Nucleobase-ascorbate tran yes no 0.969 0.949 0.731 0.0
Q6SZ87709 Nucleobase-ascorbate tran no no 0.910 0.891 0.473 1e-170
Q0WPE9538 Nucleobase-ascorbate tran no no 0.707 0.912 0.358 9e-92
Q9SHZ3520 Nucleobase-ascorbate tran no no 0.687 0.917 0.361 6e-89
Q94C70524 Nucleobase-ascorbate tran no no 0.662 0.877 0.348 6e-88
Q27GI3532 Nucleobase-ascorbate tran no no 0.721 0.941 0.327 5e-86
Q8RWE9528 Nucleobase-ascorbate tran no no 0.665 0.875 0.353 5e-84
Q8VZQ5539 Nucleobase-ascorbate tran no no 0.720 0.927 0.309 5e-81
Q8GZD4551 Nucleobase-ascorbate tran no no 0.681 0.858 0.341 4e-79
P93039526 Nucleobase-ascorbate tran no no 0.662 0.874 0.337 6e-77
>sp|Q3E7D0|NAT12_ARATH Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3 Back     alignment and function desciption
 Score =  958 bits (2477), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/730 (73%), Positives = 593/730 (81%), Gaps = 57/730 (7%)

Query: 1   MSSSDPKTRPKPGPWPPAPDATPVPPSSWAKRTGFRPKFSGETNASDS--GQISLPPKPR 58
           MSSSDPK  PKPGPWPP P++  +PPSSWAK+TGFRPKFSGET A+DS  GQ+SLP + +
Sbjct: 1   MSSSDPKPGPKPGPWPPTPESAAMPPSSWAKKTGFRPKFSGETTATDSSSGQLSLPVRAK 60

Query: 59  EPVNQPDLEAGRARATPPPAPVPAPASSQALANGDGEKVPAL---------VAPTNKDQT 109
           +   QPDLEAG+ R  PPP PV     S A+ NG+ +K             VA   KDQ 
Sbjct: 61  QQETQPDLEAGQTRLRPPP-PV-----SAAVTNGETDKDKKEKPPPPPPGSVAVPVKDQP 114

Query: 110 VKRRRDSDKGLSMNGNGHGNGNGSGPAGPTERNQHPQPQPRRAP-RNEEMVVV--DGMDD 166
           VKRRRDSD G+    NG    NGSG              P R P R EE V V    MDD
Sbjct: 115 VKRRRDSD-GVVGRSNGPDGANGSG-------------DPVRRPGRIEETVEVLPQSMDD 160

Query: 167 DGFTSRHSHMKYQLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVV 226
           D   +R+ HMKY LRDTPGLVPIG YG QHYLSMLGSLIL+PLVIVPAMGGSHE+ +NVV
Sbjct: 161 D-LVARNLHMKYGLRDTPGLVPIGFYGLQHYLSMLGSLILVPLVIVPAMGGSHEEVANVV 219

Query: 227 STVLFVSGVTTLLHTFFGSRLPLIQGSSF----------------------NFKHIMKEL 264
           STVLFVSG+TTLLHT FGSRLPLIQG SF                      NFKHIM+EL
Sbjct: 220 STVLFVSGITTLLHTSFGSRLPLIQGPSFVFLAPALAIINSPEFQGLNGNNNFKHIMREL 279

Query: 265 QGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTCLEIGVV 324
           QGAIIIGS FQA LGYSGLMSL+LRL+NPVVVAPT+AAVGLSFYSYGFPLVG CLEIGVV
Sbjct: 280 QGAIIIGSAFQAVLGYSGLMSLILRLVNPVVVAPTVAAVGLSFYSYGFPLVGKCLEIGVV 339

Query: 325 QILLVILFSLYLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVS 384
           QILLVI+F+LYLRKISV+ HRIFLIYAVPL LAITWAAAFLLTETGAY YK CD NVPVS
Sbjct: 340 QILLVIIFALYLRKISVLSHRIFLIYAVPLSLAITWAAAFLLTETGAYTYKGCDPNVPVS 399

Query: 385 NIISEHCRKHVSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIAS 444
           N++S HCRK+++RMK CRVD+SHAL S+PWFRFPYPLQWG P+F+WKMA VMCVVSVIAS
Sbjct: 400 NVVSTHCRKYMTRMKYCRVDTSHALSSAPWFRFPYPLQWGVPLFNWKMAFVMCVVSVIAS 459

Query: 445 VDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVT 504
           VDSVGSYHASSLLVASRPPT GVVSRAIGLEG  SVLAGLWGTGTGSTTLTENVHTIAVT
Sbjct: 460 VDSVGSYHASSLLVASRPPTRGVVSRAIGLEGFTSVLAGLWGTGTGSTTLTENVHTIAVT 519

Query: 505 KMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNLRYSEA 564
           KMGSRR VE+GA +L++ SL+GKVGGF+ASIPQVMVA LLCFMWAM  ALGLSNLRYSEA
Sbjct: 520 KMGSRRVVELGACVLVIFSLVGKVGGFLASIPQVMVASLLCFMWAMFTALGLSNLRYSEA 579

Query: 565 GSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNY 624
           GSSRNIIIVGLSLFFSLS+PAYFQQYGISPN+NLSVPSY+QPY V+SHGPF+S+Y G+NY
Sbjct: 580 GSSRNIIIVGLSLFFSLSVPAYFQQYGISPNSNLSVPSYYQPYIVSSHGPFKSQYKGMNY 639

Query: 625 VMNTLLSLHVVVAFLFAVVLDNTVPGSRQERGVYEWSETEAARREPAIAKDYELPFRVGR 684
           VMNTLLS+ +V+AF+ AV+LDNTVPGS+QERGVY WS++E A REPA+AKDYELPFRVGR
Sbjct: 640 VMNTLLSMSMVIAFIMAVILDNTVPGSKQERGVYVWSDSETATREPALAKDYELPFRVGR 699

Query: 685 VFRWVKWVGL 694
            FRWVKWVG+
Sbjct: 700 FFRWVKWVGI 709

Arabidopsis thaliana (taxid: 3702)
>sp|Q6SZ87|NAT11_ARATH Nucleobase-ascorbate transporter 11 OS=Arabidopsis thaliana GN=NAT11 PE=2 SV=1 Back     alignment and function description
>sp|Q0WPE9|NAT7_ARATH Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2 Back     alignment and function description
>sp|Q9SHZ3|NAT1_ARATH Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1 Back     alignment and function description
>sp|Q94C70|NAT2_ARATH Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2 Back     alignment and function description
>sp|Q27GI3|NAT6_ARATH Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2 Back     alignment and function description
>sp|Q8RWE9|NAT5_ARATH Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1 Back     alignment and function description
>sp|Q8VZQ5|NAT8_ARATH Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1 Back     alignment and function description
>sp|Q8GZD4|NAT3_ARATH Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2 Back     alignment and function description
>sp|P93039|NAT4_ARATH Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query694
224105009706 nucleobase ascorbate transporter [Populu 0.978 0.961 0.776 0.0
356543550694 PREDICTED: nucleobase-ascorbate transpor 0.969 0.969 0.765 0.0
224131640707 nucleobase ascorbate transporter [Populu 0.976 0.958 0.775 0.0
356565691694 PREDICTED: nucleobase-ascorbate transpor 0.966 0.966 0.767 0.0
297826171715 xanthine/uracil permease family protein 0.969 0.941 0.725 0.0
359479435714 PREDICTED: nucleobase-ascorbate transpor 0.985 0.957 0.772 0.0
255573070697 purine permease, putative [Ricinus commu 0.953 0.949 0.751 0.0
449443408701 PREDICTED: nucleobase-ascorbate transpor 0.974 0.964 0.759 0.0
357471943749 Nucleobase ascorbate transporter [Medica 0.955 0.885 0.728 0.0
356539309685 PREDICTED: nucleobase-ascorbate transpor 0.948 0.960 0.721 0.0
>gi|224105009|ref|XP_002313653.1| nucleobase ascorbate transporter [Populus trichocarpa] gi|222850061|gb|EEE87608.1| nucleobase ascorbate transporter [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1070 bits (2768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 560/721 (77%), Positives = 607/721 (84%), Gaps = 42/721 (5%)

Query: 1   MSSSDPKTRPKPGPWPPAPDATPVPPSSWAKRTGFRPKFSGETNASDSGQISLPPKPREP 60
           MS+SDPK RP PG  PPAP++  +PPSSWAK+TGFRPKFSGETNASDSGQISLPP+P+E 
Sbjct: 1   MSNSDPKARPIPGKRPPAPESAAMPPSSWAKKTGFRPKFSGETNASDSGQISLPPRPKEQ 60

Query: 61  VN-QPDLEAGRARATPPPAPVPAPASSQALANGDGEKVPALVAPTNKDQTV-KRRRDSDK 118
            + QPDLEAGR +ATP              A    + V AL +  NKDQTV KRRRDSD 
Sbjct: 61  RDAQPDLEAGRVKATP----PQPLPVPPPPAVNGADTVVALPS-ENKDQTVVKRRRDSDG 115

Query: 119 G---LSMNGNGHGNGNGSGPAGPTERNQHPQPQPRRAPRNEEMVVVDGMDDDGFTS-RHS 174
           G      +G+GHG  NG+G  GP      P    R A RNEE++ V+   DDGF   RH+
Sbjct: 116 GSGGAKKDGSGHGV-NGAGTNGP------PSGPRRAAARNEEVIDVE---DDGFAGGRHT 165

Query: 175 HMKYQLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSG 234
           HMKY+LRDTPGLVPIGLYGFQHYLSMLGSLILIPLV+VPAMGG++EDTS VVSTVLFVSG
Sbjct: 166 HMKYELRDTPGLVPIGLYGFQHYLSMLGSLILIPLVVVPAMGGTYEDTSTVVSTVLFVSG 225

Query: 235 VTTLLHTFFGSRLPLIQGSSF---------------------NFKHIMKELQGAIIIGSV 273
           VTTLLHT FGSRLPLIQG SF                     NFKHIMKELQGAIII S 
Sbjct: 226 VTTLLHTSFGSRLPLIQGPSFVYLAPALAIINSPEFQGLNGNNFKHIMKELQGAIIIASA 285

Query: 274 FQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTCLEIGVVQILLVILFS 333
           FQ  LGYSGLMS+LLRLINPVVVAPTIAAVGLSFYSYGFP VGTCLEIGVVQILLVI+FS
Sbjct: 286 FQTILGYSGLMSVLLRLINPVVVAPTIAAVGLSFYSYGFPRVGTCLEIGVVQILLVIMFS 345

Query: 334 LYLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRK 393
           LYLRKISV GHRIFLIYAVPLGLAITWAAAFLLTE G Y+YK CD NVP SNIIS+HCRK
Sbjct: 346 LYLRKISVFGHRIFLIYAVPLGLAITWAAAFLLTEAGVYSYKGCDANVPASNIISDHCRK 405

Query: 394 HVSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHA 453
           HVSR+K CRVD+SHALKSSPWFRFPYPLQWGTPVF WKMA+VMC VS+I+SVDSVGSYHA
Sbjct: 406 HVSRIKHCRVDTSHALKSSPWFRFPYPLQWGTPVFEWKMALVMCAVSIISSVDSVGSYHA 465

Query: 454 SSLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVE 513
           SSLL ASRPPTPGVVSR IGLEGLCSVLAGLWGTGTGSTT+TENVHTIAVTKMGSRRAVE
Sbjct: 466 SSLLAASRPPTPGVVSRGIGLEGLCSVLAGLWGTGTGSTTITENVHTIAVTKMGSRRAVE 525

Query: 514 IGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNLRYSEAGSSRNIIIV 573
           +GA  LI+LSLIGKVGGFIASIP+VMVA LLCFMWAMLAALGLSNLRYSEAGSSRNIIIV
Sbjct: 526 LGACALILLSLIGKVGGFIASIPEVMVAALLCFMWAMLAALGLSNLRYSEAGSSRNIIIV 585

Query: 574 GLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTLLSLH 633
           GLSLFFSLS+P+YFQQYGISPNTNLSVPSY QPY VA+HGPFRSKYGG+NY +NT+LSL+
Sbjct: 586 GLSLFFSLSVPSYFQQYGISPNTNLSVPSYLQPYIVATHGPFRSKYGGLNYFLNTVLSLN 645

Query: 634 VVVAFLFAVVLDNTVPGSRQERGVYEWSETEAARREPAIAKDYELPFRVGRVFRWVKWVG 693
           +V+AFL AV+LDNTVPGS+QERGVY WSETE ARREPAI KDYELPFRVGR+FRWVKWVG
Sbjct: 646 MVIAFLVAVILDNTVPGSKQERGVYVWSETEVARREPAITKDYELPFRVGRIFRWVKWVG 705

Query: 694 L 694
           L
Sbjct: 706 L 706

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356543550|ref|XP_003540223.1| PREDICTED: nucleobase-ascorbate transporter 12-like [Glycine max] Back     alignment and taxonomy information
>gi|224131640|ref|XP_002328072.1| nucleobase ascorbate transporter [Populus trichocarpa] gi|222837587|gb|EEE75952.1| nucleobase ascorbate transporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356565691|ref|XP_003551071.1| PREDICTED: nucleobase-ascorbate transporter 12-like [Glycine max] Back     alignment and taxonomy information
>gi|297826171|ref|XP_002880968.1| xanthine/uracil permease family protein [Arabidopsis lyrata subsp. lyrata] gi|297326807|gb|EFH57227.1| xanthine/uracil permease family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|359479435|ref|XP_002268537.2| PREDICTED: nucleobase-ascorbate transporter 12-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255573070|ref|XP_002527465.1| purine permease, putative [Ricinus communis] gi|223533200|gb|EEF34957.1| purine permease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449443408|ref|XP_004139469.1| PREDICTED: nucleobase-ascorbate transporter 12-like [Cucumis sativus] gi|449526130|ref|XP_004170067.1| PREDICTED: nucleobase-ascorbate transporter 12-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357471943|ref|XP_003606256.1| Nucleobase ascorbate transporter [Medicago truncatula] gi|355507311|gb|AES88453.1| Nucleobase ascorbate transporter [Medicago truncatula] Back     alignment and taxonomy information
>gi|356539309|ref|XP_003538141.1| PREDICTED: nucleobase-ascorbate transporter 12-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query694
TAIR|locus:2042036709 NAT12 "nucleobase-ascorbate tr 0.644 0.630 0.748 8e-238
TAIR|locus:2120953709 AT4G38050 [Arabidopsis thalian 0.616 0.603 0.509 4.8e-154
TAIR|locus:2158829528 AT5G49990 [Arabidopsis thalian 0.393 0.517 0.302 3.2e-74
ZFIN|ZDB-GENE-050306-38619 zgc:110789 "zgc:110789" [Danio 0.462 0.518 0.316 9.5e-69
TAIR|locus:2031085526 AT1G49960 [Arabidopsis thalian 0.389 0.513 0.296 1.8e-67
UNIPROTKB|E1BSS9623 LOC417937 "Uncharacterized pro 0.445 0.495 0.313 5.7e-67
UNIPROTKB|B9VMA9658 SVCT2 "Uncharacterized protein 0.461 0.486 0.302 1.7e-65
UNIPROTKB|F1Q2E0618 SLC23A2 "Uncharacterized prote 0.461 0.517 0.299 9e-65
UNIPROTKB|E1BP61649 SLC23A2 "Uncharacterized prote 0.449 0.480 0.301 1.4e-64
UNIPROTKB|J9P1Q8650 SLC23A2 "Uncharacterized prote 0.461 0.492 0.299 2.8e-64
TAIR|locus:2042036 NAT12 "nucleobase-ascorbate transporter 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1762 (625.3 bits), Expect = 8.0e-238, Sum P(3) = 8.0e-238
 Identities = 336/449 (74%), Positives = 371/449 (82%)

Query:   248 PLIQG--SSFNFKHIMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGL 305
             P  QG   + NFKHIM+ELQGAIIIGS FQA LGYSGLMSL+LRL+NPVVVAPT+AAVGL
Sbjct:   261 PEFQGLNGNNNFKHIMRELQGAIIIGSAFQAVLGYSGLMSLILRLVNPVVVAPTVAAVGL 320

Query:   306 SFYSYGFPLVGTCLEIGVVQILLVILFSLYLRKISVIGHRIFLIYAVPLGLAITWAAAFL 365
             SFYSYGFPLVG CLEIGVVQILLVI+F+LYLRKISV+ HRIFLIYAVPL LAITWAAAFL
Sbjct:   321 SFYSYGFPLVGKCLEIGVVQILLVIIFALYLRKISVLSHRIFLIYAVPLSLAITWAAAFL 380

Query:   366 LTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQCRVDSSHALKSSPWFRFPYPLQWGT 425
             LTETGAY YK CD NVPVSN++S HCRK+++RMK CRVD+SHAL S+PWFRFPYPLQWG 
Sbjct:   381 LTETGAYTYKGCDPNVPVSNVVSTHCRKYMTRMKYCRVDTSHALSSAPWFRFPYPLQWGV 440

Query:   426 PVFHWKXXXXXXXXXXXXXXDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVXXXXX 485
             P+F+WK              DSVGSYHASSLLVASRPPT GVVSRAIGLEG  SV     
Sbjct:   441 PLFNWKMAFVMCVVSVIASVDSVGSYHASSLLVASRPPTRGVVSRAIGLEGFTSVLAGLW 500

Query:   486 XXXXXXXXXXENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLC 545
                       ENVHTIAVTKMGSRR VE+GA +L++ SL+GKVGGF+ASIPQVMVA LLC
Sbjct:   501 GTGTGSTTLTENVHTIAVTKMGSRRVVELGACVLVIFSLVGKVGGFLASIPQVMVASLLC 560

Query:   546 FMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQ 605
             FMWAM  ALGLSNLRYSEAGSSRNIIIVGLSLFFSLS+PAYFQQYGISPN+NLSVPSY+Q
Sbjct:   561 FMWAMFTALGLSNLRYSEAGSSRNIIIVGLSLFFSLSVPAYFQQYGISPNSNLSVPSYYQ 620

Query:   606 PYSVASHGPFRSKYGGVNYVMNTXXXXXXXXXXXXXXXXDNTVPGSRQERGVYEWSETEA 665
             PY V+SHGPF+S+Y G+NYVMNT                DNTVPGS+QERGVY WS++E 
Sbjct:   621 PYIVSSHGPFKSQYKGMNYVMNTLLSMSMVIAFIMAVILDNTVPGSKQERGVYVWSDSET 680

Query:   666 ARREPAIAKDYELPFRVGRVFRWVKWVGL 694
             A REPA+AKDYELPFRVGR FRWVKWVG+
Sbjct:   681 ATREPALAKDYELPFRVGRFFRWVKWVGI 709
GO:0005215 "transporter activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0006810 "transport" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016020 "membrane" evidence=IEA;ISS
GO:0022857 "transmembrane transporter activity" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2120953 AT4G38050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2158829 AT5G49990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050306-38 zgc:110789 "zgc:110789" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
TAIR|locus:2031085 AT1G49960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1BSS9 LOC417937 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|B9VMA9 SVCT2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q2E0 SLC23A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E1BP61 SLC23A2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|J9P1Q8 SLC23A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q3E7D0NAT12_ARATHNo assigned EC number0.73150.96970.9492yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_LG_IX000099
nucleobase ascorbate transporter (706 aa)
(Populus trichocarpa)
Predicted Functional Partners:
eugene3.31020001
Predicted protein (123 aa)
  •     0.488

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query694
pfam00860389 pfam00860, Xan_ur_permease, Permease family 2e-61
TIGR03173406 TIGR03173, pbuX, xanthine permease 2e-51
COG2233451 COG2233, UraA, Xanthine/uracil permeases [Nucleoti 3e-51
TIGR00801412 TIGR00801, ncs2, uracil-xanthine permease 2e-34
TIGR03616429 TIGR03616, RutG, pyrimidine utilization transport 3e-13
PRK10720428 PRK10720, PRK10720, uracil transporter; Provisiona 4e-13
PRK11412433 PRK11412, PRK11412, putative uracil/xanthine trans 1e-07
PHA032473151 PHA03247, PHA03247, large tegument protein UL36; P 8e-06
PRK14086617 PRK14086, dnaA, chromosomal replication initiation 6e-04
PHA032473151 PHA03247, PHA03247, large tegument protein UL36; P 0.002
PRK14086617 PRK14086, dnaA, chromosomal replication initiation 0.002
PRK14951618 PRK14951, PRK14951, DNA polymerase III subunits ga 0.002
>gnl|CDD|216158 pfam00860, Xan_ur_permease, Permease family Back     alignment and domain information 
 Score =  209 bits (535), Expect = 2e-61
 Identities = 117/425 (27%), Positives = 195/425 (45%), Gaps = 70/425 (16%)

Query: 191 LYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTF-FGSRLPL 249
           L G QH L+M  + I++PL++  A+G   ED + ++S     SG+ TLL T  FG RLP+
Sbjct: 5   LLGLQHLLAMFAATIVVPLLVGDALGLGAEDLAQLISATFLASGIGTLLQTLIFGIRLPI 64

Query: 250 IQGSSFNF-------------KHIMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVV 296
             GSSF F                +  L GA+++  V    + ++GL   L RL  PVV 
Sbjct: 65  YLGSSFAFVTALMIAIGGADWGIALAGLFGAVLVAGVLFTLISFTGLRGRLARLFPPVVT 124

Query: 297 APTIAAVGLS-------FYSYGFPLV-------GTCLEIGVVQILLVILFSLYLRKISVI 342
            P +  +GLS           G+ +           L + VV + +++L S++L+     
Sbjct: 125 GPVVLLIGLSLAPIAVKGAGGGWAIADGLTVGLLDLLGLAVVVLAVILLLSVFLKG---- 180

Query: 343 GHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQCR 402
               F    + +G+   W  A  +              V  S  + +             
Sbjct: 181 ---FFRQGPILIGIIAGWLLALFMG------------IVNFSPEVMDA------------ 213

Query: 403 VDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRP 462
                     PWF+ P+P  +GTP+F+  + + +  V+++A V+S G   A + +     
Sbjct: 214 ----------PWFQLPHPFPFGTPLFNPGLILTVLAVALVAIVESTGDIRAVAKVSGRDL 263

Query: 463 PTPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVL 522
                + R +  +GL ++L+GL+G    +TT  EN+  +A+TK+ SRR       ILI+L
Sbjct: 264 KPKPDLRRGLLADGLATLLSGLFGA-FPTTTYAENIGVVALTKVYSRRVGVTAGVILILL 322

Query: 523 SLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLS 582
            LI K     +SIP  ++ G++  M+ M+A  G+SNL   +  S+RN++I+ +SL   L 
Sbjct: 323 GLIPKFAALFSSIPSPVLGGVMLVMFGMIAGSGVSNLITVDLDSARNLLIIAVSLVLGLG 382

Query: 583 IPAYF 587
           I    
Sbjct: 383 ISTVP 387

This family includes permeases for diverse substrates such as xanthine, uracil, and vitamin C. However many members of this family are functionally uncharacterized and may transport other substrates. Members of this family have ten predicted transmembrane helices. Length = 389
>gnl|CDD|234136 TIGR03173, pbuX, xanthine permease Back     alignment and domain information
>gnl|CDD|225142 COG2233, UraA, Xanthine/uracil permeases [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|233133 TIGR00801, ncs2, uracil-xanthine permease Back     alignment and domain information
>gnl|CDD|132655 TIGR03616, RutG, pyrimidine utilization transport protein G Back     alignment and domain information
>gnl|CDD|236744 PRK10720, PRK10720, uracil transporter; Provisional Back     alignment and domain information
>gnl|CDD|183124 PRK11412, PRK11412, putative uracil/xanthine transporter; Provisional Back     alignment and domain information
>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional Back     alignment and domain information
>gnl|CDD|237605 PRK14086, dnaA, chromosomal replication initiation protein; Provisional Back     alignment and domain information
>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional Back     alignment and domain information
>gnl|CDD|237605 PRK14086, dnaA, chromosomal replication initiation protein; Provisional Back     alignment and domain information
>gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 694
KOG1292510 consensus Xanthine/uracil transporters [Nucleotide 100.0
COG2233451 UraA Xanthine/uracil permeases [Nucleotide transpo 100.0
PRK11412433 putative uracil/xanthine transporter; Provisional 100.0
TIGR03616429 RutG pyrimidine utilization transport protein G. T 100.0
PRK10720428 uracil transporter; Provisional 100.0
TIGR00801415 ncs2 uracil-xanthine permease. NCS2 family appears 100.0
TIGR03173406 pbuX xanthine permease. All the seed members of th 100.0
PF00860389 Xan_ur_permease: Permease family; InterPro: IPR006 100.0
COG2252436 Xanthine/uracil/vitamin C permease [Nucleotide tra 99.94
TIGR00843395 benE benzoate transporter. The benzoate transporte 99.81
PF03594378 BenE: Benzoate membrane transport protein; InterPr 99.51
COG0659554 SUL1 Sulfate permease and related transporters (MF 99.39
COG3135402 BenE Uncharacterized protein involved in benzoate 99.38
PRK11660568 putative transporter; Provisional 99.35
TIGR00815563 sulP high affinity sulphate transporter 1. (2) SO4 99.32
PF00916280 Sulfate_transp: Sulfate transporter family; InterP 98.6
TIGR00834900 ae anion exchange protein. They preferentially cat 98.41
KOG1172876 consensus Na+-independent Cl/HCO3 exchanger AE1 an 98.05
KOG0236665 consensus Sulfate/bicarbonate/oxalate exchanger SA 98.03
PF11840492 DUF3360: Protein of unknown function (DUF3360); In 96.52
PF00955510 HCO3_cotransp: HCO3- transporter family Only parti 95.72
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.2e-103  Score=851.05  Aligned_cols=477  Identities=46%  Similarity=0.848  Sum_probs=455.7

Q ss_pred             cceecCCCCChHHHHHHHHHHHHHHHHHHhHHHHHHHhhcCCCcchh-HHHHHHHHHHHHHHHHHHHHhccCcceEeccc
Q 048106          176 MKYQLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDT-SNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSS  254 (694)
Q Consensus       176 l~y~l~d~Pp~~~~illGlQH~LaM~~~~IvvPlIia~a~Gl~~~~~-~~lIsatl~vsGIaTllQ~~~G~rLPiv~GpS  254 (694)
                      +.|+++|.|||...+++||||++.|+++++++|.++++++|.+++|. +.+||++||++||.|++|++||+|||++||+|
T Consensus         1 l~y~i~d~P~w~~~i~lgfQhyl~~lg~~v~iP~~lv~~m~~g~~~~~~~lIsT~~f~sGI~TllQt~fG~RLp~v~G~S   80 (510)
T KOG1292|consen    1 LHYCINDNPPWPEIILLGFQHYLVCLGTTVLIPFLLVPLMCGGDEEKAVQLISTIFFVSGITTLLQTTFGTRLPLVQGPS   80 (510)
T ss_pred             CccCCCCCCCchHHHHhccchHHHHhhhhhhhhhhhcccccCChHHHHHHHHHHHhhhccHHHHHHHHhhcccccccccc
Confidence            47999999999999999999999999999999999999999999998 99999999999999999999999999999999


Q ss_pred             cchHH---------------------------HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCceehhhhhhhhhhh
Q 048106          255 FNFKH---------------------------IMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSF  307 (694)
Q Consensus       255 fafi~---------------------------~~~~~~GaiivaGl~~ilLg~tgl~~~L~r~fpPvV~g~vV~lIGlsL  307 (694)
                      |+|+.                           .|+++|||+++++++++++|++|+++++.|++.|+.+.|+++++|+++
T Consensus        81 fafl~p~~~i~~~~~~~~~~~~~~~~~~~~~~~mr~iqGAlivas~vqiilG~sGl~g~l~rfi~Plti~P~v~lvgl~l  160 (510)
T KOG1292|consen   81 FAFLPPALAIISLPRFTCITTPHETDTERFQHRMREIQGALIVASLVQIILGFSGLWGNLLRFIGPLTIVPLVALVGLGL  160 (510)
T ss_pred             eehhhHHHHHHhccccCCCCCcccchhHHHHHHHHHhcchHHHHHHHHHHHhhhhhHHHHHhhcCChhhhhHHHHHhhhh
Confidence            97752                           368899999999999999999999999999999999999999999999


Q ss_pred             hhcccccccchhhhhHHHHHHHHHHHHH--HHHHHh--hhhhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCc
Q 048106          308 YSYGFPLVGTCLEIGVVQILLVILFSLY--LRKISV--IGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPV  383 (694)
Q Consensus       308 ~~~g~~~~g~~~~ig~~~~ll~i~~sl~--l~~i~~--~g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~  383 (694)
                      +..+++.++.||+++++..++++++++|  +.+...  ..++++++|++++++.+.|++|++++.+|.|+++++      
T Consensus       161 ~~~~~~~~~~~weI~l~~~llli~fsqy~~~~~~~~~~~~~~if~~f~vll~i~ivW~~~~iLT~tgay~~~~~------  234 (510)
T KOG1292|consen  161 FQDGFPKLGKHWEISLPEILLLILFSQYASLPKKGFGSRRIQIFSRFPVLLAIAIVWLYCFILTITGAYPYKPT------  234 (510)
T ss_pred             HHhhhhhhhhheeecHHHHHHHHHHHHhhhcccccccccccchHhhccHHHHHHHHHHHHHHHHhccccCCCcc------
Confidence            9999999999999999999999999999  422222  236789999999999999999999999999988754      


Q ss_pred             cccccccccccccccccccccCCccccCCCccccccccccccccchHHHHHHHHHHHHHHhhhcchhhhhhhhhccCCCC
Q 048106          384 SNIISEHCRKHVSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPP  463 (694)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~vD~s~~v~~apWf~lP~p~~~G~P~F~~~~il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~  463 (694)
                                  +|+.+||+|.+..++++||+++|||+|||.|+||++.++.|+...+++++||+|+|.++++.+..+++
T Consensus       235 ------------~t~~~~RTD~~~vi~~apWi~vPyP~QwG~P~f~~~~~f~m~aa~~va~iES~G~y~a~ar~~~a~pp  302 (510)
T KOG1292|consen  235 ------------TTQSSCRTDRNGVISSAPWIRVPYPFQWGPPTFSAGLVFAMMAASLVAMIESTGDYIACARLSSATPP  302 (510)
T ss_pred             ------------ccCCcccccHhhhhccCCceeecCCCccCCCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHhcCCCC
Confidence                        46788999998888999999999999999999999999999999999999999999999999988999


Q ss_pred             CCcccccccccchhHHHHHhhhcCCCCcccccccceeeeecccccceehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHH
Q 048106          464 TPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGL  543 (694)
Q Consensus       464 ~~~~i~Rgi~adGl~silAGl~Gtg~p~TtyseNvGvIalTgvaSR~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~  543 (694)
                      +++.++||+..||++++|+|+||+|+++|||+||+|++++|||+|||+++++|+|||++|++.||+|++++||+|++||+
T Consensus       303 P~~~inRgi~~eGig~lL~gl~G~gtG~Tt~~ENigll~vTKVgSRrvvQ~aa~fmI~~~i~gKFgA~fAsIP~piv~~l  382 (510)
T KOG1292|consen  303 PPSVLNRGIGWEGIGSLLAGLFGTGTGSTTSVENIGLLGVTKVGSRRVVQIAAGFMIFFGIFGKFGAFFASIPDPIVGGL  382 (510)
T ss_pred             ChhhhhhhhhhhhHHHHHHHhhCCCccceeeccceeeEeeeeeeeeeehhhhHHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccccccccCCCccceEEEEehhhcccchhhhhhhcCCCCCcccCCCcccccccccCCCCccccccchh
Q 048106          544 LCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVN  623 (694)
Q Consensus       544 livlfg~i~~sGl~~L~~~~~~~~RN~~IvGlsL~~Glgv~~~f~~~~~~p~~~~~lP~~~~p~~~~~~g~~~t~~~~~~  623 (694)
                      +|++|+|+.+.|+++||+.|+++.||++|+|+|+++|+++|+||+||+                     +|+||+++++|
T Consensus       383 ~c~~~~mv~avgLSnLQf~dlns~RNl~IlG~Sif~gLsip~yF~~~~---------------------~~v~Tg~~~~d  441 (510)
T KOG1292|consen  383 LCILFGMVGAVGLSNLQFVDLNSSRNLFILGFSIFLGLSIPQYFEQYP---------------------GPVHTGNGWFD  441 (510)
T ss_pred             HHHHHHHHHHHhhhhheeeccccccchhhhhHHHHHhccHHHHHHhCC---------------------CccccCcHHHH
Confidence            999999999999999999999999999999999999999999999873                     47899999999


Q ss_pred             hHHHHHhhhhHHHHHHHHHhhcccCCC-CcccccccccccchhccccccccccccCCcccccccccccc
Q 048106          624 YVMNTLLSLHVVVAFLFAVVLDNTVPG-SRQERGVYEWSETEAARREPAIAKDYELPFRVGRVFRWVKW  691 (694)
Q Consensus       624 ~~l~~ll~sg~~vg~lvaiiLn~~lp~-~~~erg~~~w~~~~~~~~~~~~~~~y~lp~~~~~~~~~~~~  691 (694)
                      +++|++|++.|.+|+++|++|||++|+ ++||||.++|++.++...|.+.+|+|+||++++|+|+++||
T Consensus       442 ~ilnvll~~~m~Vggi~A~~LDnt~~gatr~~RG~~~w~~~~~~~~d~~~~e~Y~lP~~~n~~f~~~~~  510 (510)
T KOG1292|consen  442 DILNVLLSSRMLVGGILAFILDNTLPGATREQRGLRWWDKFETFNGDVRNEEFYSLPFNLNRFFPRIPW  510 (510)
T ss_pred             HHHHHHhhHHHHHHHHHhhhccccCCCCChHhcCCcchhccccccCCccccccccCcHHHHhhcccCCC
Confidence            999999999999999999999999998 59999999999999999999999999999999999999998

>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK11412 putative uracil/xanthine transporter; Provisional Back     alignment and domain information
>TIGR03616 RutG pyrimidine utilization transport protein G Back     alignment and domain information
>PRK10720 uracil transporter; Provisional Back     alignment and domain information
>TIGR00801 ncs2 uracil-xanthine permease Back     alignment and domain information
>TIGR03173 pbuX xanthine permease Back     alignment and domain information
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters [] Back     alignment and domain information
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR00843 benE benzoate transporter Back     alignment and domain information
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ] Back     alignment and domain information
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK11660 putative transporter; Provisional Back     alignment and domain information
>TIGR00815 sulP high affinity sulphate transporter 1 Back     alignment and domain information
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related Back     alignment and domain information
>TIGR00834 ae anion exchange protein Back     alignment and domain information
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query694
3qe7_A429 Uracil permease; uracil transporter, URAA, transpo 2e-45
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Length = 429 Back     alignment and structure
 Score =  166 bits (423), Expect = 2e-45
 Identities = 83/430 (19%), Positives = 164/430 (38%), Gaps = 82/430 (19%)

Query: 178 YQLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTT 237
             + + P L+       QH  +M G+ +L+P++       +        +TVL  +G+ T
Sbjct: 6   IGVSERPPLLQTIPLSLQHLFAMFGATVLVPVL----FHIN-------PATVLLFNGIGT 54

Query: 238 LLHTF-FGSRLPLIQGSSFNF--------KHIMKELQGAIIIGSVFQAFLG---YSGLMS 285
           LL+ F    ++P   GSSF F            +   G  I+  V    +          
Sbjct: 55  LLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFCLVSFIVKKAGTG 114

Query: 286 LLLRLINPVVVAPTIAAVGLS---------FYSYGFPLVG--TCLEIGVVQILLVILFSL 334
            L  L  P  +   +A +GL                        + I +  + + +L S+
Sbjct: 115 WLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSV 174

Query: 335 YLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKH 394
             R           I  + +G+ + +A +F +                            
Sbjct: 175 LFRGF-------LAIIPILIGVLVGYALSFAMGI-------------------------- 201

Query: 395 VSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHAS 454
                   VD++  + ++ WF  P      TP F W   + +   +++   + VG    +
Sbjct: 202 --------VDTT-PIINAHWFALP---TLYTPRFEWFAILTILPAALVVIAEHVGHLVVT 249

Query: 455 SLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEI 514
           + +V         + R++   GL +V++G +G  T +TT  EN+  +A+T++ S   +  
Sbjct: 250 ANIVKKDLLRDPGLHRSMFANGLSTVISGFFG-STPNTTYGENIGVMAITRVYSTWVIGG 308

Query: 515 GAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNLRYSEA--GSSRNIII 572
            A   I+LS +GK+   I  IP  ++ G+   ++ ++ A G+  L  S+     ++N+I+
Sbjct: 309 AAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKAQNLIL 368

Query: 573 VGLSLFFSLS 582
             + L   +S
Sbjct: 369 TSVILIIGVS 378

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query694
3qe7_A429 Uracil permease; uracil transporter, URAA, transpo 100.0
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Back     alignment and structure
Probab=100.00  E-value=6e-68  Score=584.76  Aligned_cols=402  Identities=22%  Similarity=0.335  Sum_probs=337.3

Q ss_pred             CcceecCCCCChHHHHHHHHHHHHHHHHHHhHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHh-ccCcceEecc
Q 048106          175 HMKYQLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFF-GSRLPLIQGS  253 (694)
Q Consensus       175 ~l~y~l~d~Pp~~~~illGlQH~LaM~~~~IvvPlIia~a~Gl~~~~~~~lIsatl~vsGIaTllQ~~~-G~rLPiv~Gp  253 (694)
                      +..|++|||||+.+++++|+||+++|+++++++|+++    |+|+       ++++++|||+|++|+++ |+|+|+++|+
T Consensus         3 ~~~~~~~~~~~~~~~i~~GlQh~lam~~~~v~~Plil----Gl~~-------~~~l~~agi~Tllq~~~~~~~lP~~~G~   71 (429)
T 3qe7_A            3 RRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLF----HINP-------ATVLLFNGIGTLLYLFICKGKIPAYLGS   71 (429)
T ss_dssp             -CCBCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT----TSCH-------HHHHHHHHHHHHHHHHHTTTCCCCCEEE
T ss_pred             CcccCcccCCCHHHHHHHHHHHHHHHHHHHHHhHHHh----CCCH-------HHHHHHHHHHHHHHHHHcCCCCCeEecC
Confidence            4689999999999999999999999999999999998    7775       48999999999999987 8999999999


Q ss_pred             ccchHH--------HHHHHHHHHHHHHHHHHHHHhh--hHH-HHHHHHhCCceehhhhhhhhhhhhhcccccccch---h
Q 048106          254 SFNFKH--------IMKELQGAIIIGSVFQAFLGYS--GLM-SLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTC---L  319 (694)
Q Consensus       254 Sfafi~--------~~~~~~GaiivaGl~~ilLg~t--gl~-~~L~r~fpPvV~g~vV~lIGlsL~~~g~~~~g~~---~  319 (694)
                      ||+|+.        .+++++|+++++|+++++++++  ++. ++++|+|||+|+|+++++||++|++.++++.+..   .
T Consensus        72 sfafi~~~~~i~~~g~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl~l~~~~~~~~~~~~~~~  151 (429)
T 3qe7_A           72 SFAFISPVLLLLPLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEG  151 (429)
T ss_dssp             CGGGHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTSSCBTT
T ss_pred             hHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHHHHHHHHHHhccccCCCC
Confidence            999953        2678999999999999999986  333 6899999999999999999999999988775421   1


Q ss_pred             hhhHHHHHHHHHHHH-HHHHHHhhhhhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCcccccccccccccccc
Q 048106          320 EIGVVQILLVILFSL-YLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRM  398 (694)
Q Consensus       320 ~ig~~~~ll~i~~sl-~l~~i~~~g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~  398 (694)
                      +.+.+..+.+.++++ .+..++++.|+++|++++|+|+++||++++++|.                              
T Consensus       152 ~~~~~~~~~la~~tl~iii~~~~~~kg~~~~~aiLigivvg~~~a~~~G~------------------------------  201 (429)
T 3qe7_A          152 QTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGI------------------------------  201 (429)
T ss_dssp             BCCCHHHHHHHHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHHHHHHH------------------------------
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHhcC------------------------------
Confidence            122222222222222 2234577899999999999999999999999874                              


Q ss_pred             ccccccCCccccCCCccccccccccccccchHHHHHHHHHHHHHHhhhcchhhhhhhhhccCCCCCCcccccccccchhH
Q 048106          399 KQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLC  478 (694)
Q Consensus       399 ~~~~vD~s~~v~~apWf~lP~p~~~G~P~F~~~~il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i~Rgi~adGl~  478 (694)
                          +|++ .+.+++|+++|.   |+.|+||+..++.++.+++++++|++||+.++++..+++..++++++|++.+||++
T Consensus       202 ----~d~~-~v~~a~~~~lP~---~~~P~f~~~~i~~i~~i~lV~~~Eslg~~~av~~~~g~~~~~~~~~~r~l~adGla  273 (429)
T 3qe7_A          202 ----VDTT-PIINAHWFALPT---LYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLS  273 (429)
T ss_dssp             ----TTSS-HHHHSCSSCCCC---CCCCCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCTCCCCCHHHHHHHHHHH
T ss_pred             ----CCcc-cccccccccccC---CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHH
Confidence                4555 366789999995   57799999999999999999999999999999998754333567899999999999


Q ss_pred             HHHHhhhcCCCCcccccccceeeeecccccceehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHHHHHHHHHHHhhccc
Q 048106          479 SVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSN  558 (694)
Q Consensus       479 silAGl~Gtg~p~TtyseNvGvIalTgvaSR~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~livlfg~i~~sGl~~  558 (694)
                      |+++|+||+ +|+|+|+||+|+++.||++||++.+++|+++++++|+||+++++++||.+|+||+++++||++.++|+|+
T Consensus       274 ~i~~glfGg-~p~Tt~~en~g~i~~tg~~sr~~~~~ag~~lillgl~pk~~al~~~IP~~vlgg~~l~lfg~i~~~Gi~~  352 (429)
T 3qe7_A          274 TVISGFFGS-TPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRV  352 (429)
T ss_dssp             HHHHHHHTC-CCEEECHHHHHHHHHHTBCCHHHHHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCC-CCcchHHHhHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999995 9999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             c--ccccCCCccceEEEEehhhcccchhhhhhhcCCCCCcccCCCcccccccccCCCCccccccchhhHHHHHhhhhHHH
Q 048106          559 L--RYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTLLSLHVVV  636 (694)
Q Consensus       559 L--~~~~~~~~RN~~IvGlsL~~Glgv~~~f~~~~~~p~~~~~lP~~~~p~~~~~~g~~~t~~~~~~~~l~~ll~sg~~v  636 (694)
                      +  ++.|+.++||.+|+|+++++|++...              +|  ++                      .++.+|+++
T Consensus       353 l~~~~v~~~~~rn~~i~~~~l~~G~g~~~--------------~~--~~----------------------~~~~~gi~~  394 (429)
T 3qe7_A          353 LIESKVDYNKAQNLILTSVILIIGVSGAK--------------VN--IG----------------------AAELKGMAL  394 (429)
T ss_dssp             HHHTTSCTTSHHHHHHHHHHHHHHHHCCC--------------CC--SS----------------------SCCCCHHHH
T ss_pred             HHhcCCCCCCcchhHHHHHHHHHHHHHHH--------------Hh--hh----------------------hhccCcHHH
Confidence            9  77888788999999999999998642              12  12                      256789999


Q ss_pred             HHHHHHhhcccCCCCcccccccccccch
Q 048106          637 AFLFAVVLDNTVPGSRQERGVYEWSETE  664 (694)
Q Consensus       637 g~lvaiiLn~~lp~~~~erg~~~w~~~~  664 (694)
                      |+++|++||+++|+++++|+.++--..|
T Consensus       395 ~~~~ai~ln~~l~~~~~~~~~~~~~~~~  422 (429)
T 3qe7_A          395 ATIVGIGLSLIFKLISVLRPEEVVLDAE  422 (429)
T ss_dssp             HHHHHHHHHHHHTCCC------------
T ss_pred             HHHHHHHHHHHhcCccccCCcceEecch
Confidence            9999999999999888777754443333

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00