Citrus Sinensis ID: 048112

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90----
Protein Sequence
MAIRFPSALNAKHILRQLKLLANQAAATASVSADVPKGHLARLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLNWS
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHccccccccEEEEccHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHcHcccccccccEEcccccEEEEEEEEcHcccHHHHHHHHHHHHHHcccccccccEccccHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mairfpsalNAKHILRQLKLLANQAAAtasvsadvpkghlarliipvsflnhpsFQELLTKAgedfgyyhpmggltipcrKDAFINLTSRLNWS
Flexible Loop (DISEMBL)
MAIRFPSALNAKHILRQLKLLANQAAATAsvsadvpkgHLARLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLNWS
Low Complexity Region (SEG)
MAIRFPSALNAKHIlrqlkllanqaaatasvsaDVPKGHLARLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLNWS
Disordered region (IsUnstruct)
********LNAKHILRQLKLLANQAAATASVSADVPKGHLARLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSR****
Disordered Region (DISOPRED)
*A*******N***************************GHLARLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLNW*
Disordered Region (DISEMBL)
MAIRFPSALNAKHILRQLKLLAN*********ADVPKGHLARLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLNWS
Disordered Region (DISPRO)
*AIRFPSALNAKHILRQLKLLANQAAATASVSADVPKGHLARLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRL***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAIRFPSALNAKHILRQLKLLANQAAATASVSADVPKGHLARLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLNWS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	94	2.2.26 [Sep-21-2011]
P33080	92	Auxin-induced protein X10	no	no	0.872	0.891	0.49	9e-20
P33079	93	Auxin-induced protein 10A	no	no	0.808	0.817	0.528	2e-19
P33083	90	Auxin-induced protein 6B	no	no	0.872	0.911	0.48	3e-18
P33081	82	Auxin-induced protein 15A	no	no	0.680	0.780	0.597	5e-18
P33082	82	Auxin-induced protein X15	no	no	0.680	0.780	0.555	7e-17
P32295	92	Indole-3-acetic acid-indu	N/A	no	0.776	0.793	0.512	4e-15

>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1

 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 49/100 (49%), Positives = 64/100 (64%), Gaps = 18/100 (18%)

Query: 1  MAIRFPSALNAKHILRQLKLLANQAAATASVSADVPKGHLA--------RLIIPVSFLNH 52
          M  R P        +R+  + ANQA+   S S +VPKG+L         R +IPVS+LN 
Sbjct: 1  MGFRLPG-------IRKTSIAANQAS---SKSVEVPKGYLVVYVGDKMRRFLIPVSYLNQ 50

Query: 53 PSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLN 92
          PSFQ+LL +A E+FGY HPMGGLTIPC++D F+ +TS LN
Sbjct: 51 PSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLN 90

Glycine max (taxid: 3847)

>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1

 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/87 (52%), Positives = 59/87 (67%), Gaps = 11/87 (12%)

Query: 14 ILRQLKLLANQAAATASVSADVPKGHLA--------RLIIPVSFLNHPSFQELLTKAGED 65
          I+R+      QAA   S   DVPKG+ A        R  IPVS+LN PSFQELL++A E+
Sbjct: 8  IVRRTSFYTTQAA---SKRVDVPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEE 64

Query: 66 FGYYHPMGGLTIPCRKDAFINLTSRLN 92
          FGY HPMGGLTIPC+++ F+N+T+ LN
Sbjct: 65 FGYDHPMGGLTIPCKEEEFLNVTAHLN 91

Glycine max (taxid: 3847)

>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 18/100 (18%)

Query: 1  MAIRFPSALNAKHILRQLKLLANQAAATASVSADVPKGHLA--------RLIIPVSFLNH 52
          M  R P        +R+    ANQA++ A    DV KG+LA        R +IPVS+LN 
Sbjct: 1  MGFRLPG-------IRKASFSANQASSKA---VDVEKGYLAVYVGEKMRRFVIPVSYLNK 50

Query: 53 PSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLN 92
          PSFQ+LL++A E+FGY+HP GGLTIPC +D F ++TS LN
Sbjct: 51 PSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90

Glycine max (taxid: 3847)

>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1

 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 53/72 (73%), Gaps = 8/72 (11%)

Query: 29 ASVSADVPKGHLA--------RLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCR 80
          AS +AD PKG+LA        R +IPVS+LN PSFQ+LL++A E+FGY HPMGGLTIPC 
Sbjct: 11 ASKAADAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCS 70

Query: 81 KDAFINLTSRLN 92
          +D F  +TS LN
Sbjct: 71 EDVFQCITSCLN 82

Glycine max (taxid: 3847)

>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1

 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 8/72 (11%)

Query: 29 ASVSADVPKGHLA--------RLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCR 80
          AS + D PKG+LA        R +IPVS++N PSFQ+LLT+A E+FGY HPMGGLTIPC 
Sbjct: 11 ASNAVDAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCS 70

Query: 81 KDAFINLTSRLN 92
          ++ F  +T  LN
Sbjct: 71 EEVFQRITCCLN 82

Glycine max (taxid: 3847)

>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1

 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 56/82 (68%), Gaps = 9/82 (10%)

Query: 19 KLLANQAAATASVSADVPKGHLA--------RLIIPVSFLNHPSFQELLTKAGEDFGYYH 70
          K L+ +  A++ V  D PKG+LA        R +IPVS LN P FQ+LL++A E+FGY H
Sbjct: 10 KTLSARNEASSKV-LDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDH 68

Query: 71 PMGGLTIPCRKDAFINLTSRLN 92
          PMGGLTIPC +D F ++TS L+
Sbjct: 69 PMGGLTIPCSEDLFQHITSCLS 90


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.136    0.409 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,733,954
Number of Sequences: 539616
Number of extensions: 1153893
Number of successful extensions: 3488
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3480
Number of HSP's gapped (non-prelim): 7
length of query: 94
length of database: 191,569,459
effective HSP length: 64
effective length of query: 30
effective length of database: 157,034,035
effective search space: 4711021050
effective search space used: 4711021050
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)

Vigna radiata var. radiata (taxid: 3916)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
225430959	103	PREDICTED: auxin-induced protein X10A [V	1.0	0.912	0.514	2e-24
356517873	100	PREDICTED: auxin-induced protein 10A5-li	0.946	0.89	0.574	2e-23
356508118	106	PREDICTED: auxin-induced protein 10A5-li	0.936	0.830	0.58	2e-23
388490922	100	unknown [Lotus japonicus]	0.946	0.89	0.574	1e-22
388495436	101	unknown [Lotus japonicus]	0.957	0.891	0.564	2e-22
224080524	96	SAUR family protein [Populus trichocarpa	0.925	0.906	0.543	2e-22
351727258	95	uncharacterized protein LOC100306459 [Gl	0.893	0.884	0.574	3e-22
225430953	103	PREDICTED: auxin-induced protein X10A-li	0.978	0.893	0.485	6e-22
356509541	95	PREDICTED: indole-3-acetic acid-induced	0.882	0.873	0.57	8e-22
356508124	95	PREDICTED: indole-3-acetic acid-induced	0.893	0.884	0.564	1e-21

>gi|225430959|ref|XP_002271660.1| PREDICTED: auxin-induced protein X10A [Vitis vinifera]

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/103 (51%), Positives = 74/103 (71%), Gaps = 9/103 (8%)

Query: 1   MAIRFPSALNAKHILRQLKLLANQAAATASVSADVPKGHLA---------RLIIPVSFLN 51
           M  RFPS + AK IL+   LL+   ++ ++ +A+VPKGH A         R ++P+S+LN
Sbjct: 1   MGFRFPSIIQAKQILKLHSLLSRGQSSISATAAEVPKGHFAVYVGEAEKKRFVVPISYLN 60

Query: 52  HPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLNWS 94
           +PSFQ+LL+ A E+FG+ HPMGG+TIPC++DAFINLTSR N S
Sbjct: 61  NPSFQKLLSHAEEEFGFNHPMGGVTIPCKEDAFINLTSRFNSS 103

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356517873|ref|XP_003527610.1| PREDICTED: auxin-induced protein 10A5-like [Glycine max]

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 12/101 (11%)

Query: 1  MAIRFPSALNAKHILRQLKLLANQAAATASVSADVPKGHLA---------RLIIPVSFLN 51
          MAIR PS L+AK+ILR+  L AN AA T   S DVPKGH A         R +IPVS+LN
Sbjct: 1  MAIRLPSILSAKYILRRSNLFANHAATT---SLDVPKGHFAVYVGEGEKKRFVIPVSYLN 57

Query: 52 HPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLN 92
           PSFQELL+ A E+FG+ HPMGGL IPC ++ F+N+TS L+
Sbjct: 58 QPSFQELLSIAEEEFGFSHPMGGLIIPCTEEIFLNITSGLH 98

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508118|ref|XP_003522807.1| PREDICTED: auxin-induced protein 10A5-like [Glycine max]

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/100 (58%), Positives = 70/100 (70%), Gaps = 12/100 (12%)

Query: 1  MAIRFPSALNAKHILRQLKLLANQAAATASVSADVPKGHLA---------RLIIPVSFLN 51
          MAIR PS L+AK+ILR+  L AN AA T   S DVPKGH A         R +IPVS+LN
Sbjct: 1  MAIRLPSVLSAKYILRRSNLFANHAATT---SLDVPKGHFAVYVGEGEKRRYVIPVSYLN 57

Query: 52 HPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRL 91
           PSFQELL+ A E+FG+ HPMGGL IPC ++ F+N+TS L
Sbjct: 58 QPSFQELLSIAEEEFGFSHPMGGLIIPCTEENFLNITSGL 97

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388490922|gb|AFK33527.1| unknown [Lotus japonicus]

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/101 (57%), Positives = 68/101 (67%), Gaps = 12/101 (11%)

Query: 1  MAIRFPSALNAKHILRQLKLLANQAAATASVSADVPKGHLA---------RLIIPVSFLN 51
          MAIR  SAL+AK ILR   L ANQAAAT   S DVPKG+ A         R +IPVS LN
Sbjct: 1  MAIRLSSALSAKRILRGSSLFANQAAAT---SLDVPKGYFAVYVGESEKKRFVIPVSLLN 57

Query: 52 HPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLN 92
           PSFQELL+ A E+FG+ HPMGGL IPC +D F+ + S L+
Sbjct: 58 QPSFQELLSAAEEEFGFSHPMGGLIIPCTEDIFVEVASGLH 98

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388495436|gb|AFK35784.1| unknown [Lotus japonicus]

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/101 (56%), Positives = 68/101 (67%), Gaps = 11/101 (10%)

Query: 1  MAIRFPSALNAKHILRQLKLLANQAAATASVSADVPKGHLA---------RLIIPVSFLN 51
          MAIR  SAL+AK ILR   L  NQAAA+ S+  DVPKGH A         R +IPVS L 
Sbjct: 1  MAIRLSSALSAKRILRGFSLFTNQAAASTSL--DVPKGHFAVYVGESEKKRFVIPVSLLI 58

Query: 52 HPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLN 92
           PSFQELL+ A E+FG+ HPMGGL IPC +D F+ +TS L+
Sbjct: 59 QPSFQELLSIAEEEFGFSHPMGGLIIPCTEDIFVEVTSGLH 99

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080524|ref|XP_002306150.1| SAUR family protein [Populus trichocarpa] gi|222849114|gb|EEE86661.1| SAUR family protein [Populus trichocarpa]

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/103 (54%), Positives = 67/103 (65%), Gaps = 16/103 (15%)

Query: 1  MAIRFPSALNAKHILRQLKLLANQAAATASVSADVPKGHLA---------RLIIPVSFLN 51
          MAI     +NAK ILR+  LLANQA        +VPKG+ A         R  +P+SFLN
Sbjct: 1  MAILLKGIMNAKQILRRSNLLANQAT-------EVPKGYFAVYVGESQKKRFTVPISFLN 53

Query: 52 HPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLNWS 94
           PSFQELL KA E+FGY HPMGGLT+PCR+D FI++ S LN S
Sbjct: 54 QPSFQELLRKAEEEFGYSHPMGGLTLPCREDTFIDIISGLNLS 96

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727258|ref|NP_001235363.1| uncharacterized protein LOC100306459 [Glycine max] gi|255628609|gb|ACU14649.1| unknown [Glycine max]

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 17/101 (16%)

Query: 1  MAIRFPSALNAKHILRQLKLLANQAAATASVSADVPKGHLA---------RLIIPVSFLN 51
          MAIR PSAL+A+HILR+     + AAAT   S DVPKG+ A         R +IPVS LN
Sbjct: 2  MAIRLPSALSARHILRR-----SNAAAT---SLDVPKGYFAVYVGEGEKKRFVIPVSLLN 53

Query: 52 HPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLN 92
           PSFQELL+ A E+FG+ HPMGGLTIPC +D F+N+TS L+
Sbjct: 54 QPSFQELLSIAEEEFGFTHPMGGLTIPCTEDIFVNITSGLH 94

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430953|ref|XP_002271562.1| PREDICTED: auxin-induced protein X10A-like [Vitis vinifera]

 Score =  107 bits (268), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 49/101 (48%), Positives = 71/101 (70%), Gaps = 9/101 (8%)

Query: 1   MAIRFPSALNAKHILRQLKLLANQAAATASVSADVPKGHLA---------RLIIPVSFLN 51
           M  R PS ++A+ IL+   LL    ++  + +A+VPKGH A         R ++P+S+LN
Sbjct: 1   MGFRLPSMVHARQILKLQSLLTRSQSSILATTAEVPKGHFAVYVGEAEKKRFVVPISYLN 60

Query: 52  HPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLN 92
           +PSFQ+LL+ A E+FG+ HPMGG+TIPC +DAFI+LTSRL+
Sbjct: 61  NPSFQKLLSHAEEEFGFNHPMGGVTIPCNEDAFIDLTSRLH 101

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509541|ref|XP_003523506.1| PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Glycine max]

 Score =  107 bits (267), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 57/100 (57%), Positives = 68/100 (68%), Gaps = 17/100 (17%)

Query: 1  MAIRFPSALNAKHILRQLKLLANQAAATASVSADVPKGHLA---------RLIIPVSFLN 51
          MAIR P  L+AKHI R+     + AAAT   S DVPKGH A         R +IPVS+LN
Sbjct: 1  MAIRLPCVLSAKHIFRR-----SNAAAT---SLDVPKGHFAVYVGEGEKKRFVIPVSYLN 52

Query: 52 HPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRL 91
           PSFQELL+ A E+FG+ HPMGGLTIPC +D F+N+TS L
Sbjct: 53 QPSFQELLSIAEEEFGFSHPMGGLTIPCTEDIFLNITSAL 92

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508124|ref|XP_003522810.1| PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Glycine max]

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/101 (56%), Positives = 71/101 (70%), Gaps = 17/101 (16%)

Query: 1  MAIRFPSALNAKHILRQLKLLANQAAATASVSADVPKGHLA---------RLIIPVSFLN 51
          MAIR PSAL+A+HILR+     + AAAT   S DVPKG  A         R +IPVS LN
Sbjct: 2  MAIRLPSALSARHILRR-----SNAAAT---SLDVPKGCFAVYVGEGEKKRFVIPVSLLN 53

Query: 52 HPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLN 92
           PSFQELL+ A ++FG+ HPMGGLTIPC++D F+N+TS L+
Sbjct: 54 QPSFQELLSIAEQEFGFTHPMGGLTIPCKEDIFVNITSGLH 94

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
TAIR|locus:2141772	99	AT4G38840 "AT4G38840" [Arabido	0.946	0.898	0.460	1.1e-16
TAIR|locus:2047007	98	AT2G21210 "AT2G21210" [Arabido	0.638	0.612	0.542	4.2e-15
TAIR|locus:2116895	105	AT4G34810 "AT4G34810" [Arabido	0.606	0.542	0.542	4.2e-15
TAIR|locus:2172299	90	SAUR24 "AT5G18080" [Arabidopsi	0.531	0.555	0.68	4.2e-15
TAIR|locus:2161518	90	SAUR23 "AT5G18060" [Arabidopsi	0.542	0.566	0.647	6.9e-15
TAIR|locus:2161573	90	SAUR22 "AT5G18050" [Arabidopsi	0.531	0.555	0.64	1.1e-14
TAIR|locus:2161543	91	SAUR20 "AT5G18020" [Arabidopsi	0.521	0.538	0.653	1.4e-14
TAIR|locus:2161538	90	SAUR19 "AT5G18010" [Arabidopsi	0.531	0.555	0.64	2.3e-14
TAIR|locus:2116885	94	AT4G34800 "AT4G34800" [Arabido	0.563	0.563	0.531	3e-14
TAIR|locus:2161558	88	AT5G18030 "AT5G18030" [Arabido	0.531	0.568	0.64	3e-14

TAIR|locus:2141772 AT4G38840 "AT4G38840" [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 47/102 (46%), Positives = 60/102 (58%)

Query:     1 MAIRFPSAL-NAKHIXXXXXXXXXXXXXXXXXXXDVPKGHLA---------RLIIPVSFL 50
             MAIR P  L ++K I                   DVPKG+LA         R ++PVS+L
Sbjct:     1 MAIRIPRVLQSSKQILRQAKLLSSSSSSSSL---DVPKGYLAVYVGEQNMKRFVVPVSYL 57

Query:    51 NHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLN 92
             + PSFQ+LL KA E+FG+ HPMGGLTIPC ++ FI+L SR N
Sbjct:    58 DQPSFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0042742 "defense response to bacterium" evidence=RCA

TAIR|locus:2047007 AT2G21210 "AT2G21210" [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 38/70 (54%), Positives = 50/70 (71%)

Query:    35 VPKGHLA----------RLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAF 84
             +PKGHLA          R ++PV++L+HP FQ+LL KA E+FG+ HPMGGLTIPC +  F
Sbjct:    28 IPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQKLLRKAEEEFGFDHPMGGLTIPCTEQIF 87

Query:    85 INLTSRLNWS 94
             I+L SRL+ S
Sbjct:    88 IDLASRLSTS 97

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0010200 "response to chitin" evidence=IEP

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

TAIR|locus:2116895 AT4G34810 "AT4G34810" [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 38/70 (54%), Positives = 51/70 (72%)

Query:    35 VPKGHLA------------RLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKD 82
             VPKGH+A            R ++P+SFLNHPSF+E L++A E+FG+ HPMGGLTIPCR++
Sbjct:    35 VPKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREE 94

Query:    83 AFINL-TSRL 91
              F++L  SRL
Sbjct:    95 VFLDLIASRL 104

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2172299 SAUR24 "AT5G18080" [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 34/50 (68%), Positives = 43/50 (86%)

Query:    42 RLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRL 91
             R ++PVS+LN PSFQ LL+K+ E+FG+ HPMGGLTIPC +D FIN+TSRL
Sbjct:    40 RYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRL 89

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2161518 SAUR23 "AT5G18060" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 33/51 (64%), Positives = 44/51 (86%)

Query:    42 RLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRLN 92
             R ++P+S+LN PSFQ LL+K+ E+FG+ HPMGGLTIPC +D FIN+TSRL+
Sbjct:    40 RYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRLH 90

GO:0003674 "molecular_function" evidence=ND

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2161573 SAUR22 "AT5G18050" [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 32/50 (64%), Positives = 43/50 (86%)

Query:    42 RLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRL 91
             R ++P+S+LN PSFQ LL+K+ ++FG+ HPMGGLTIPC +D FIN+TSRL
Sbjct:    40 RYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFINVTSRL 89

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2161543 SAUR20 "AT5G18020" [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 32/49 (65%), Positives = 42/49 (85%)

Query:    42 RLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSR 90
             R ++P+S+LN PSFQ LL+K+ E+FG+ HPMGGLTIPC +D FIN+TSR
Sbjct:    40 RYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSR 88

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2161538 SAUR19 "AT5G18010" [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 32/50 (64%), Positives = 43/50 (86%)

Query:    42 RLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRL 91
             R ++P+S+L+ PSFQ LL+K+ E+FG+ HPMGGLTIPC +D FIN+TSRL
Sbjct:    40 RYLVPLSYLSQPSFQALLSKSEEEFGFAHPMGGLTIPCPEDTFINVTSRL 89

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2116885 AT4G34800 "AT4G34800" [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 34/64 (53%), Positives = 47/64 (73%)

Query:    35 VPKGHLA-----------RLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDA 83
             VPKGH+A           R ++P+S+LNHPSFQ LL++A E+FG+ HP+GGLTIPCR++ 
Sbjct:    21 VPKGHVAVYVGEEMESKKRFVVPISYLNHPSFQGLLSRAEEEFGFNHPIGGLTIPCREET 80

Query:    84 FINL 87
             F+ L
Sbjct:    81 FVGL 84

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2161558 AT5G18030 "AT5G18030" [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 32/50 (64%), Positives = 43/50 (86%)

Query:    42 RLIIPVSFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRL 91
             R ++P+S+L+ PSFQ LL+K+ E+FG+ HPMGGLTIPC +D FIN+TSRL
Sbjct:    38 RYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRL 87

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00025081001 SubName- Full=Chromosome chr4 scaffold_32, whole genome shotgun sequence; (103 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	94
pfam02519	99	pfam02519, Auxin_inducible, Auxin responsive prote	1e-28
PLN03220	105	PLN03220, PLN03220, uncharacterized protein; Provi	3e-26
PLN03090	104	PLN03090, PLN03090, auxin-responsive family protei	5e-21
PLN03219	108	PLN03219, PLN03219, uncharacterized protein; Provi	6e-20

>gnl|CDD|217082 pfam02519, Auxin_inducible, Auxin responsive protein

 Score = 98.2 bits (245), Expect = 1e-28
 Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 9/99 (9%)

Query: 1  MAIRFPSALNAKHILRQLKLLANQAAATASVSADVPKGHLA--------RLIIPVSFLNH 52
          MA R   A +AK  +       ++ +++ S SADVPKGH A        R ++P+S+LNH
Sbjct: 1  MASRLKKASSAKKWILSAASGRSRGSSSKSSSADVPKGHFAVYVGEETRRFVVPISYLNH 60

Query: 53 PSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRL 91
          P FQELL +A E+FG+    GGLTIPC    F +L   L
Sbjct: 61 PLFQELLDRAEEEFGFDQ-DGGLTIPCDVVVFEHLLWML 98

This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role. Length = 99

>gnl|CDD|178759 PLN03220, PLN03220, uncharacterized protein; Provisional

 Score = 92.9 bits (230), Expect = 3e-26
 Identities = 49/101 (48%), Positives = 67/101 (66%), Gaps = 14/101 (13%)

Query: 4   RFPSALNAKHILRQLKLLANQAAATASVSADVPKGHLA------------RLIIPVSFLN 51
           RF  +   K IL+ L  LAN+   ++S S  VPKGH+A            R ++P+SFLN
Sbjct: 5   RFAISNATKQILK-LNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPISFLN 63

Query: 52  HPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINL-TSRL 91
           HPSF+E L++A E+FG+ HPMGGLTIPCR++ F++L  SRL
Sbjct: 64  HPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRL 104

Length = 105

>gnl|CDD|178639 PLN03090, PLN03090, auxin-responsive family protein; Provisional

 Score = 79.4 bits (196), Expect = 5e-21
 Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 14/104 (13%)

Query: 1   MAIRFPSALNAKHILRQ-LK----LLANQAAATASVSADVPKGHLA--------RLIIPV 47
           MAI+  + L    +L+Q LK    L   Q      +  DVPKGH          R I+P+
Sbjct: 1   MAIKKSNKLTQTAMLKQILKRCSSLGKKQGYDEDGLPLDVPKGHFPVYVGENRSRYIVPI 60

Query: 48  SFLNHPSFQELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTSRL 91
           SFL HP FQ LL +A E+FG+ H M GLTIPC +  F +LTS +
Sbjct: 61  SFLTHPEFQSLLQQAEEEFGFDHDM-GLTIPCEEVVFRSLTSMI 103

Length = 104

>gnl|CDD|178758 PLN03219, PLN03219, uncharacterized protein; Provisional

 Score = 76.7 bits (188), Expect = 6e-20
 Identities = 36/94 (38%), Positives = 60/94 (63%), Gaps = 14/94 (14%)

Query: 10  NAKHILRQLKLL----ANQAAATASVSADVPKGHLA----------RLIIPVSFLNHPSF 55
           NAK I +   +     ++  +++ + S  VPKGH+A          R ++P+S+LNHP F
Sbjct: 10  NAKQIFKSQSMRNKNGSSSPSSSTTTSGLVPKGHVAVYVGEQMEKKRFVVPISYLNHPLF 69

Query: 56  QELLTKAGEDFGYYHPMGGLTIPCRKDAFINLTS 89
           +E L +A E+ G++H MGGLTIPCR+++F++L +
Sbjct: 70  REFLNRAEEECGFHHSMGGLTIPCREESFLHLIT 103

Length = 108

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	94
PLN03090	104	auxin-responsive family protein; Provisional	100.0
PLN03220	105	uncharacterized protein; Provisional	100.0
PF02519	100	Auxin_inducible: Auxin responsive protein; InterPr	99.97
PLN03219	108	uncharacterized protein; Provisional	99.97
PRK02899	197	adaptor protein; Provisional	86.63
PRK02315	233	adaptor protein; Provisional	82.9

>PLN03090 auxin-responsive family protein; Provisional

Probab=100.00  E-value=6.8e-37  Score=209.24  Aligned_cols=91  Identities=44%  Similarity=0.751  Sum_probs=81.2

Q ss_pred             Ccccch----hHHhHHHHHHHhHHHhhhhhc-cccccccCCCCcee--------EEEEecCCCCchHHHHHHHhhhhhcC
Q 048112            1 MAIRFP----SALNAKHILRQLKLLANQAAA-TASVSADVPKGHLA--------RLIIPVSFLNHPSFQELLTKAGEDFG   67 (94)
Q Consensus         1 m~~~~~----~~~~lk~~lrr~~s~~~~~~~-~~s~~~~vpkG~~a--------RfvVp~~~L~hP~F~~LL~~aeeEfG   67 (94)
                      |||+.+    +++++||+||||+|.+++++. ....+.+|||||||        ||+||++|||||+|++||++||||||
T Consensus         1 m~~~k~~ki~~~~~~kq~l~r~~s~~~~~~~~~~~~~~~vpkG~~aVyVG~~~~RfvVp~~~L~hP~F~~LL~~aeeEfG   80 (104)
T PLN03090          1 MAIKKSNKLTQTAMLKQILKRCSSLGKKQGYDEDGLPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQQAEEEFG   80 (104)
T ss_pred             CCcccccchhHHHHHHHHHHHHHHhcccCCcccccCCCCCCCCcEEEEECCCCEEEEEEHHHcCCHHHHHHHHHHHHHhC
Confidence            777754    467999999999999877543 24577899999999        99999999999999999999999999


Q ss_pred             cccCCCceeeeCcHHHHHHHHHhhc
Q 048112           68 YYHPMGGLTIPCRKDAFINLTSRLN   92 (94)
Q Consensus        68 ~~~~~G~L~iPC~~~~F~~vl~~l~   92 (94)
                      |+|+ |+|+||||++.|++++|+|+
T Consensus        81 f~~~-G~L~IPC~~~~Fe~ll~~i~  104 (104)
T PLN03090         81 FDHD-MGLTIPCEEVVFRSLTSMIR  104 (104)
T ss_pred             CCCC-CcEEEeCCHHHHHHHHHHhC
Confidence            9998 89999999999999999983

>PLN03220 uncharacterized protein; Provisional

Probab=100.00  E-value=5.1e-35  Score=200.15  Aligned_cols=89  Identities=51%  Similarity=0.942  Sum_probs=80.2

Q ss_pred             CcccchhHHh-HHHHHHHhHHHhhhhhccccccccCCCCcee------------EEEEecCCCCchHHHHHHHhhhhhcC
Q 048112            1 MAIRFPSALN-AKHILRQLKLLANQAAATASVSADVPKGHLA------------RLIIPVSFLNHPSFQELLTKAGEDFG   67 (94)
Q Consensus         1 m~~~~~~~~~-lk~~lrr~~s~~~~~~~~~s~~~~vpkG~~a------------RfvVp~~~L~hP~F~~LL~~aeeEfG   67 (94)
                      ||++++.|.. .||++||++ .+++.+..++.+.+|||||||            |||||++|||||+|++||++||||||
T Consensus         1 ~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~VPkGh~aVyVGe~~~~e~kRFVVPv~yL~hP~F~~LL~~AeEEfG   79 (105)
T PLN03220          1 MGLSRFAISNATKQILKLNS-LANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLSRAEEEFG   79 (105)
T ss_pred             CCcchhhhHHHHHHHHHHHh-hcccccccccccCCCCCCeEEEEECCCCCccceEEEEEHHHcCChHHHHHHHHHHHHhC
Confidence            8999999984 599999999 666555556678899999999            99999999999999999999999999


Q ss_pred             cccCCCceeeeCcHHHHHHHHHh
Q 048112           68 YYHPMGGLTIPCRKDAFINLTSR   90 (94)
Q Consensus        68 ~~~~~G~L~iPC~~~~F~~vl~~   90 (94)
                      |+|++|+|+||||++.|++++..
T Consensus        80 f~~~~G~L~IPCd~~~F~~ll~s  102 (105)
T PLN03220         80 FNHPMGGLTIPCREEVFLDLIAS  102 (105)
T ss_pred             CCCCCCCEEeeCCHHHHHHHHHh
Confidence            99855999999999999999864

>PF02519 Auxin_inducible: Auxin responsive protein; InterPro: IPR003676 This family consists of the protein products of a gene cluster that encodes a group of auxin-regulated RNAs (small auxin up RNAs, SAURs) []

Probab=99.97  E-value=5.2e-32  Score=183.21  Aligned_cols=91  Identities=44%  Similarity=0.702  Sum_probs=70.5

Q ss_pred             CcccchhHHhHHHHHHHhHHHhhhh-hccccccccCCCCcee--------EEEEecCCCCchHHHHHHHhhhhhcCcccC
Q 048112            1 MAIRFPSALNAKHILRQLKLLANQA-AATASVSADVPKGHLA--------RLIIPVSFLNHPSFQELLTKAGEDFGYYHP   71 (94)
Q Consensus         1 m~~~~~~~~~lk~~lrr~~s~~~~~-~~~~s~~~~vpkG~~a--------RfvVp~~~L~hP~F~~LL~~aeeEfG~~~~   71 (94)
                      |+-++.++..+++...++....+.. .+.++...++|+||||        ||+||++|||||+|++||++|||||||+++
T Consensus         1 M~~~~k~~~~~~k~~~~~~~~~~~~~~~~~~~~~~vp~G~~~VyVG~~~~Rfvvp~~~L~hp~f~~LL~~aeeEfG~~~~   80 (100)
T PF02519_consen    1 MASRLKSLASAKKWQSRARSKSSSSSSSRSSSESDVPKGHFAVYVGEERRRFVVPVSYLNHPLFQELLEQAEEEFGFDQD   80 (100)
T ss_pred             CccHHHHHHHHHhhhhhhhhcccccccccccccCCCCCCeEEEEeCccceEEEechHHcCchhHHHHHHHHhhhcCcCCC
Confidence            4555555554444444433322221 1123345899999999        999999999999999999999999999997


Q ss_pred             CCceeeeCcHHHHHHHHHhhc
Q 048112           72 MGGLTIPCRKDAFINLTSRLN   92 (94)
Q Consensus        72 ~G~L~iPC~~~~F~~vl~~l~   92 (94)
                       |+|+||||++.|++++|+|+
T Consensus        81 -G~l~iPC~~~~Fe~~l~~le  100 (100)
T PF02519_consen   81 -GPLTIPCDVVLFEHLLWLLE  100 (100)
T ss_pred             -CcEEeeCCHHHHHHHHHHhC
Confidence             99999999999999999986

Proteins from this ARG7 auxin responsive genes family have no identified functional role [].

>PLN03219 uncharacterized protein; Provisional

Probab=99.97  E-value=7.3e-32  Score=185.37  Aligned_cols=91  Identities=41%  Similarity=0.802  Sum_probs=77.6

Q ss_pred             CcccchhHHhHHHHHHHhHHHhhhhhc----cccccccCCCCcee----------EEEEecCCCCchHHHHHHHhhhhhc
Q 048112            1 MAIRFPSALNAKHILRQLKLLANQAAA----TASVSADVPKGHLA----------RLIIPVSFLNHPSFQELLTKAGEDF   66 (94)
Q Consensus         1 m~~~~~~~~~lk~~lrr~~s~~~~~~~----~~s~~~~vpkG~~a----------RfvVp~~~L~hP~F~~LL~~aeeEf   66 (94)
                      ||...+-+...||+.|-.+...+.+++    +++.+.+|||||+|          ||+||++|||||+|++||++|||||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpkGh~aVYVG~~~E~kRFvVPi~yL~hP~F~~LL~~AeEEf   80 (108)
T PLN03219          1 MGLMRSMLPNAKQIFKSQSMRNKNGSSSPSSSTTTSGLVPKGHVAVYVGEQMEKKRFVVPISYLNHPLFREFLNRAEEEC   80 (108)
T ss_pred             CchHHHHHhhHHHHHHHHHHhcccCCCCCccCCCCCCCCCCCeEEEEECCCCCceEEEEEHHHcCChHHHHHHHHHHHHh
Confidence            777787888999998766655554433    24566789999999          9999999999999999999999999


Q ss_pred             CcccCCCceeeeCcHHHHHHHHHhh
Q 048112           67 GYYHPMGGLTIPCRKDAFINLTSRL   91 (94)
Q Consensus        67 G~~~~~G~L~iPC~~~~F~~vl~~l   91 (94)
                      ||+|++|+|+||||++.|+++++.-
T Consensus        81 Gf~~~~G~L~IPCd~~~F~~ll~~~  105 (108)
T PLN03219         81 GFHHSMGGLTIPCREESFLHLITSH  105 (108)
T ss_pred             CCCCCCCCEEEeCCHHHHHHHHHhh
Confidence            9998559999999999999999763

>PRK02899 adaptor protein; Provisional

Probab=86.63  E-value=0.57  Score=34.86  Aligned_cols=25  Identities=20%  Similarity=0.659  Sum_probs=21.6

Q ss_pred             chHHHHHHHhhhhhcCcccCCCceee
Q 048112           52 HPSFQELLTKAGEDFGYYHPMGGLTI   77 (94)
Q Consensus        52 hP~F~~LL~~aeeEfG~~~~~G~L~i   77 (94)
                      +-+|.++|++|..|+||..+ |+|+|
T Consensus        38 e~lF~~mm~Ea~~e~~F~~~-~pl~~   62 (197)
T PRK02899         38 HQLFRDMMQEANKELGFEAD-GPIAV   62 (197)
T ss_pred             HHHHHHHHHHhhhccCcccC-CeEEE
Confidence            35788889999999999987 89875

>PRK02315 adaptor protein; Provisional

Probab=82.90  E-value=1  Score=34.16  Aligned_cols=24  Identities=17%  Similarity=0.285  Sum_probs=21.9

Q ss_pred             hHHHHHHHhhhhhcCcccCCCceee
Q 048112           53 PSFQELLTKAGEDFGYYHPMGGLTI   77 (94)
Q Consensus        53 P~F~~LL~~aeeEfG~~~~~G~L~i   77 (94)
                      -+|.++|++|..|+||..+ |+|+|
T Consensus        39 ~fF~~mm~Ea~~e~~F~~~-~pl~~   62 (233)
T PRK02315         39 EFFYSMMDEVDEEDDFADE-GPLWF   62 (233)
T ss_pred             HHHHHHHHHhccccCcccC-CeEEE
Confidence            5899999999999999986 89986

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00