Citrus Sinensis ID: 048119

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260------
MNLLISFVLWLVFTLFCVMASSFNSGGRRKHLPPGLRPYPVIGNLLHKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDRKHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSINLLPNTIFSIDLVHPNERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSISIKSKDMLDTVLNIIQDKSENVV
ccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHccccEEEccccccccccccEEEEccHHHHHHHHHHccccccccccccccEEEccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHccccccccccc
cHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEcccEcHHHHHHHHHHHHcccEEEEEEcccEEEEEEEEEEEccHHHHHHHHHHcccHEcccccccccEEEccccHHHHHHHHHHHHHHHcHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccHHcHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccc
MNLLISFVLWLVFTLFCVMAssfnsggrrkhlppglrpypviGNLLHKSLAKLAKIhgpimnlrlgvrLSFNLVTTVVVSSPSTAKAILKEHDslfcdrkhhefslvwlPVSTLWRSYRKMCNMhifnrqkldasqdLRHKKIKDLLTYVEENCragkaidfGQAAFntsinllpntifsidlvhpnerkfkDTVWGMMeeagkpnlsdhfpllkkldlqgtrhrntlyagemfevqehgcsisikSKDMLDTVLNIIqdksenvv
MNLLISFVLWLVFTLFCVMASSFNSGGRRKHLPPGLRPYPVIGNLLHKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDRKHHEFSLVWLPVSTLWRSYRKMCNMHIFNrqkldasqdlRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSINLLPNTIFSIDLVHPNERKFKDTVWGMMEEAgkpnlsdhfpLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSISIKSKDMLDTVLNiiqdksenvv
MNLLISFVLWLVFTLFCVMASSFNSGGRRKHLPPGLRPYPVIGNLLHKSLAKLAKIHGPIMNLRLGVRLSFNLvttvvvsspstAKAILKEHDSLFCDRKHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSINLLPNTIFSIDLVHPNERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSISIKSKDMLDTVLNIIQDKSENVV
**LLISFVLWLVFTLFCVMASSFNSGGRRKHLPPGLRPYPVIGNLLHKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDRKHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSINLLPNTIFSIDLVHPNERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSISIKSKDMLDTVLNII********
MNLLISFVLWLVFTLFCVMA****************RPYPVIGNLLHKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDRKHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCR**KAIDFGQAAFNTSINLLPNTIFSIDLVHPNERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMF*****************DTVL***********
MNLLISFVLWLVFTLFCVMASSFNSGGRRKHLPPGLRPYPVIGNLLHKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDRKHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSINLLPNTIFSIDLVHPNERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSISIKSKDMLDTVLNIIQDKSENVV
MNLLISFVLWLVFTLFCVMASSFNSGGRRKHLPPGLRPYPVIGNLLHKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDRKHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSINLLPNTIFSIDLVHPNERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSISIKSKDMLDTVLNIIQD******
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNLLISFVLWLVFTLFCVMASSFNSGGRRKHLPPGLRPYPVIGNLLHKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDRKHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSINLLPNTIFSIDLVHPNERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSISIKSKDMLDTVLNIIQDKSENVV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query266 2.2.26 [Sep-21-2011]
Q8VWZ7 493 Geraniol 8-hydroxylase OS N/A no 0.951 0.513 0.442 6e-56
D1MI46 495 Geraniol 8-hydroxylase OS N/A no 0.812 0.436 0.439 2e-48
O64635 511 Cytochrome P450 76C4 OS=A yes no 0.774 0.403 0.375 5e-41
O23976 490 7-ethoxycoumarin O-deethy N/A no 0.921 0.5 0.374 2e-40
O64636 512 Cytochrome P450 76C1 OS=A no no 0.947 0.492 0.309 3e-35
O64638 515 Cytochrome P450 76C3 OS=A no no 0.796 0.411 0.350 7e-35
O64637 512 Cytochrome P450 76C2 OS=A no no 0.778 0.404 0.349 2e-33
O64899 487 (S)-N-methylcoclaurine 3' N/A no 0.774 0.422 0.314 1e-29
O64900 488 (S)-N-methylcoclaurine 3' N/A no 0.774 0.422 0.318 5e-29
Q9FXW4 488 Probable (S)-N-methylcocl N/A no 0.830 0.452 0.301 4e-24
>sp|Q8VWZ7|C76B6_CATRO Geraniol 8-hydroxylase OS=Catharanthus roseus GN=CYP76B6 PE=1 SV=1 Back     alignment and function desciption
 Score =  217 bits (553), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 127/287 (44%), Positives = 179/287 (62%), Gaps = 34/287 (11%)

Query: 5   ISFVLWLVFTLFCVMASSFNSGGRRKHLPPGLRPYPVIGNL------LHKSLAKLAKIHG 58
           ++ +L L+F L    A S+ S  R K+LPPG  P P IG+L       HKSLAKL+K HG
Sbjct: 4   LTIILTLLFALTLYEAFSYLSR-RTKNLPPGPSPLPFIGSLHLLGDQPHKSLAKLSKKHG 62

Query: 59  PIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDRK---------HHEFSLVWL 109
           PIM+L+LG       +TT+V+SS + AK +L++ D  F  R            +FS+VWL
Sbjct: 63  PIMSLKLGQ------ITTIVISSSTMAKEVLQKQDLAFSSRSVPNALHAHNQFKFSVVWL 116

Query: 110 PVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNT 169
           PV++ WRS RK+ N +IF+  +LDA+Q LR +K+++L+ Y  +N ++G+A+D G+AAF T
Sbjct: 117 PVASRWRSLRKVLNSNIFSGNRLDANQHLRTRKVQELIAYCRKNSQSGEAVDVGRAAFRT 176

Query: 170 SINLLPNTIFSIDLVHP---NERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRN 226
           S+NLL N IFS DL  P   + ++FKD VW +M EAGKPNL D FPLL+K+D QG RHR 
Sbjct: 177 SLNLLSNLIFSKDLTDPYSDSAKEFKDLVWNIMVEAGKPNLVDFFPLLEKVDPQGIRHRM 236

Query: 227 TLYAGEMF--------EVQEHGCSISIKSKDMLDTVLNIIQDKSENV 265
           T++ GE+         E  E   S   K+ D+LD +L   Q+  E +
Sbjct: 237 TIHFGEVLKLFGGLVNERLEQRRSKGEKN-DVLDVLLTTSQESPEEI 282
Hydroxylase involved in the biosynthesis of hydroxygeraniol, a precursor of the terpenoid indole alkaloids such as vinblastine and vincristine. Also able to hydroxylate in vitro nerol and to catalyze 3'-hydroxylation of the flavanone naringenin to form eriodictyol. No activity with apigenin, kaempferol, p-coumaric acid and ferulic acid as substrates.
Catharanthus roseus (taxid: 4058)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 1EC: 5EC: 2
>sp|D1MI46|C76BA_SWEMU Geraniol 8-hydroxylase OS=Swertia mussotii GN=CYP76B10 PE=1 SV=1 Back     alignment and function description
>sp|O64635|C76C4_ARATH Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=3 SV=1 Back     alignment and function description
>sp|O23976|C76B1_HELTU 7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1 Back     alignment and function description
>sp|O64636|C76C1_ARATH Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1 Back     alignment and function description
>sp|O64638|C76C3_ARATH Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2 Back     alignment and function description
>sp|O64637|C76C2_ARATH Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1 Back     alignment and function description
>sp|O64899|C80B1_ESCCA (S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1 Back     alignment and function description
>sp|O64900|C80B2_ESCCA (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1 Back     alignment and function description
>sp|Q9FXW4|C80B2_COPJA Probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Coptis japonica GN=CYP80B2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query266
225427085 498 PREDICTED: cytochrome P450 76C4 [Vitis v 0.951 0.508 0.451 1e-62
297742026 594 unnamed protein product [Vitis vinifera] 0.951 0.425 0.451 2e-62
225426693 499 PREDICTED: cytochrome P450 76C4 [Vitis v 0.936 0.498 0.455 1e-61
359474277 499 PREDICTED: LOW QUALITY PROTEIN: 7-ethoxy 0.936 0.498 0.452 2e-61
7406712 499 putative ripening-related P-450 enzyme [ 0.936 0.498 0.452 3e-61
224058639 493 cytochrome P450 [Populus trichocarpa] gi 0.943 0.509 0.432 4e-60
255537171 377 cytochrome P450, putative [Ricinus commu 0.958 0.676 0.437 2e-58
224071632 496 cytochrome P450 [Populus trichocarpa] gi 0.973 0.522 0.430 3e-58
359474275 499 PREDICTED: 7-ethoxycoumarin O-deethylase 0.954 0.509 0.432 9e-56
75161264 493 RecName: Full=Geraniol 8-hydroxylase; Al 0.951 0.513 0.442 3e-54
>gi|225427085|ref|XP_002276561.1| PREDICTED: cytochrome P450 76C4 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 130/288 (45%), Positives = 190/288 (65%), Gaps = 35/288 (12%)

Query: 4   LISFVLWLV--FTLFCVMASSFNSGGRRKHLPPGLRPYPVIGNLL------HKSLAKLAK 55
           L+S++L L+  +T   ++ S+  S      LPPG  P+P+IGNLL      H+SLA LAK
Sbjct: 3   LMSYLLCLLVAWTSIYIVVSARRSKSGAGKLPPGPVPFPIIGNLLNLGNKPHESLANLAK 62

Query: 56  IHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR---------KHHEFSL 106
           I+GP+M+L+LG       VTTVV++S + AK +L++ D  FC+R          H++ S+
Sbjct: 63  IYGPVMSLKLGC------VTTVVITSATMAKEVLQKKDQSFCNRTIPDALRALNHNQISM 116

Query: 107 VWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAA 166
           VWLPVST WR+ RK+CN HIF  QKLD+S  LRH+K++DLL  VE++C+AG  +D GQ A
Sbjct: 117 VWLPVSTKWRTLRKICNSHIFTNQKLDSSNYLRHQKVQDLLANVEQSCQAGDVVDIGQEA 176

Query: 167 FNTSINLLPNTIFSIDLVHPNE---RKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTR 223
           F T++NLL NT FS+DLV P+    ++FK+ V  MMEEA KPNL+D+FP+++K+D QG R
Sbjct: 177 FRTTLNLLSNTTFSVDLVEPSSDTVQEFKELVRHMMEEAAKPNLADYFPVVRKIDPQGIR 236

Query: 224 HRNTLYAGEMFEVQEHGCSISIKSK---------DMLDTVLNIIQDKS 262
            R  ++ G+M +V +      ++S+         D+LDT+LNI +D +
Sbjct: 237 RRMAIHFGKMIKVLDKKVKQRLRSRQVQGWMASSDVLDTLLNISEDSN 284

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297742026|emb|CBI33813.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225426693|ref|XP_002281735.1| PREDICTED: cytochrome P450 76C4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359474277|ref|XP_003631428.1| PREDICTED: LOW QUALITY PROTEIN: 7-ethoxycoumarin O-deethylase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|7406712|emb|CAB85635.1| putative ripening-related P-450 enzyme [Vitis vinifera] Back     alignment and taxonomy information
>gi|224058639|ref|XP_002299579.1| cytochrome P450 [Populus trichocarpa] gi|222846837|gb|EEE84384.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255537171|ref|XP_002509652.1| cytochrome P450, putative [Ricinus communis] gi|223549551|gb|EEF51039.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224071632|ref|XP_002303546.1| cytochrome P450 [Populus trichocarpa] gi|222840978|gb|EEE78525.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359474275|ref|XP_003631427.1| PREDICTED: 7-ethoxycoumarin O-deethylase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|75161264|sp|Q8VWZ7.1|C76B6_CATRO RecName: Full=Geraniol 8-hydroxylase; AltName: Full=Cytochrome P450 76B6; AltName: Full=Geraniol 10-hydroxylase; Short=CrG10H gi|17065916|emb|CAC80883.1| geraniol 10-hydroxylase [Catharanthus roseus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query266
UNIPROTKB|Q8VWZ7 493 CYP76B6 "Geraniol 8-hydroxylas 0.954 0.515 0.426 1.1e-48
UNIPROTKB|D1MI46 495 CYP76B10 "Geraniol 8-hydroxyla 0.947 0.509 0.410 3.8e-46
TAIR|locus:2043694 511 CYP76C4 ""cytochrome P450, fam 0.815 0.424 0.354 1.4e-32
TAIR|locus:2100982 498 CYP76C7 ""cytochrome P450, fam 0.958 0.512 0.314 1.8e-32
TAIR|locus:2043614 515 CYP76C3 ""cytochrome P450, fam 0.864 0.446 0.352 5.5e-32
TAIR|locus:2043605 512 CYP76C2 ""cytochrome P450, fam 0.887 0.460 0.315 1.5e-29
TAIR|locus:2012693 511 CYP76C6 ""cytochrome P450, fam 0.958 0.499 0.296 3.5e-28
TAIR|locus:2043699 512 CYP76C1 ""cytochrome P450, fam 0.793 0.412 0.334 3.5e-28
UNIPROTKB|Q69X58 500 CYP76M7 "Ent-cassadiene C11-al 0.766 0.408 0.327 2.6e-22
TAIR|locus:2139099 520 CYP706A5 ""cytochrome P450, fa 0.759 0.388 0.316 1e-21
UNIPROTKB|Q8VWZ7 CYP76B6 "Geraniol 8-hydroxylase" [Catharanthus roseus (taxid:4058)] Back     alignment and assigned GO terms
 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 122/286 (42%), Positives = 174/286 (60%)

Query:     5 ISFVLWLVFTLFCVMASSFNSGGRRKHLPPGLRPYPVIGNLL------HKSLAKLAKIHG 58
             ++ +L L+F L    A S+ S  R K+LPPG  P P IG+L       HKSLAKL+K HG
Sbjct:     4 LTIILTLLFALTLYEAFSYLSR-RTKNLPPGPSPLPFIGSLHLLGDQPHKSLAKLSKKHG 62

Query:    59 PIMNLRLGVRLSFNLXXXXXXXXXXXAKAILKEHDSLFCDRK-------HHEF--SLVWL 109
             PIM+L+LG   +  +           AK +L++ D  F  R        H++F  S+VWL
Sbjct:    63 PIMSLKLGQITTIVISSSTM------AKEVLQKQDLAFSSRSVPNALHAHNQFKFSVVWL 116

Query:   110 PVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNT 169
             PV++ WRS RK+ N +IF+  +LDA+Q LR +K+++L+ Y  +N ++G+A+D G+AAF T
Sbjct:   117 PVASRWRSLRKVLNSNIFSGNRLDANQHLRTRKVQELIAYCRKNSQSGEAVDVGRAAFRT 176

Query:   170 SINLLPNTIFSIDLVHP---NERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRN 226
             S+NLL N IFS DL  P   + ++FKD VW +M EAGKPNL D FPLL+K+D QG RHR 
Sbjct:   177 SLNLLSNLIFSKDLTDPYSDSAKEFKDLVWNIMVEAGKPNLVDFFPLLEKVDPQGIRHRM 236

Query:   227 TLYAGEMFE-----VQEHGCSISIKSK--DMLDTVLNIIQDKSENV 265
             T++ GE+ +     V E       K +  D+LD +L   Q+  E +
Sbjct:   237 TIHFGEVLKLFGGLVNERLEQRRSKGEKNDVLDVLLTTSQESPEEI 282
GO:0016099 "monoterpenoid biosynthetic process" evidence=IDA
GO:0016709 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen" evidence=IDA
UNIPROTKB|D1MI46 CYP76B10 "Geraniol 8-hydroxylase" [Swertia mussotii (taxid:137888)] Back     alignment and assigned GO terms
TAIR|locus:2043694 CYP76C4 ""cytochrome P450, family 76, subfamily C, polypeptide 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2100982 CYP76C7 ""cytochrome P450, family 76, subfamily C, polypeptide 7"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043614 CYP76C3 ""cytochrome P450, family 76, subfamily C, polypeptide 3"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043605 CYP76C2 ""cytochrome P450, family 76, subfamily C, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012693 CYP76C6 ""cytochrome P450, family 76, subfamily C, polypeptide 6"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043699 CYP76C1 ""cytochrome P450, family 76, subfamily C, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q69X58 CYP76M7 "Ent-cassadiene C11-alpha-hydroxylase 1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2139099 CYP706A5 ""cytochrome P450, family 706, subfamily A, polypeptide 5"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00015660001
SubName- Full=Chromosome chr2 scaffold_11, whole genome shotgun sequence; (498 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query266
PLN02687 517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 2e-34
PLN03112 514 PLN03112, PLN03112, cytochrome P450 family protein 1e-20
PLN00110 504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 3e-20
PLN02183 516 PLN02183, PLN02183, ferulate 5-hydroxylase 3e-19
PLN02966 502 PLN02966, PLN02966, cytochrome P450 83A1 3e-16
pfam00067 461 pfam00067, p450, Cytochrome P450 3e-14
PLN02394 503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 2e-10
PLN03234 499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 2e-08
PLN00168 519 PLN00168, PLN00168, Cytochrome P450; Provisional 4e-06
PLN02655 466 PLN02655, PLN02655, ent-kaurene oxidase 5e-06
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information 
 Score =  129 bits (326), Expect = 2e-34
 Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 41/289 (14%)

Query: 3   LLISFVLWLVFTLFCVMASSFNSGGRRKHLPPGLRPYPVIGNL------LHKSLAKLAKI 56
           LL+  V   V  ++C++     SG  ++ LPPG R +PV+GNL       H ++A LAK 
Sbjct: 7   LLLGTVAVSVL-VWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKT 65

Query: 57  HGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR------KHHEFS---LV 107
           +GP+  LR G       V  VV +S S A   L+ HD+ F +R      +H  ++   LV
Sbjct: 66  YGPLFRLRFG------FVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMAYNYQDLV 119

Query: 108 WLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAG--KAIDFGQA 165
           + P    WR+ RK+C +H+F+ + LD   D RH + +++   V E  R      ++ GQ 
Sbjct: 120 FAPYGPRWRALRKICAVHLFSAKALD---DFRHVREEEVALLVRELARQHGTAPVNLGQL 176

Query: 166 AFNTSINLLPNT-----IFSIDLVHPNERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQ 220
               + N L        +F+ D      R+FK+ V  +M+ AG  N+ D  P L+ LDLQ
Sbjct: 177 VNVCTTNALGRAMVGRRVFAGD-GDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQ 235

Query: 221 GT--------RHRNTLYAGEMFEVQEHGCSISIKSKDMLDTVLNIIQDK 261
           G         R  + +  G + E +  G + S + KD+L T+L + +++
Sbjct: 236 GVVGKMKRLHRRFDAMMNGIIEEHKAAGQTGSEEHKDLLSTLLALKREQ 284

Length = 517
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 266
KOG0156 489 consensus Cytochrome P450 CYP2 subfamily [Secondar 100.0
PLN02687 517 flavonoid 3'-monooxygenase 100.0
PLN03234 499 cytochrome P450 83B1; Provisional 99.97
PLN00110 504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 99.97
PLN03112 514 cytochrome P450 family protein; Provisional 99.97
PLN02971 543 tryptophan N-hydroxylase 99.97
PTZ00404 482 cytochrome P450; Provisional 99.97
PLN02183 516 ferulate 5-hydroxylase 99.97
PLN02966 502 cytochrome P450 83A1 99.96
PLN00168 519 Cytochrome P450; Provisional 99.96
PLN02290 516 cytokinin trans-hydroxylase 99.96
KOG0158 499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 99.96
PLN02655 466 ent-kaurene oxidase 99.96
PLN02394 503 trans-cinnamate 4-monooxygenase 99.95
PLN03018 534 homomethionine N-hydroxylase 99.94
PLN02500 490 cytochrome P450 90B1 99.94
PF00067 463 p450: Cytochrome P450 p450 superfamily signature b 99.94
PLN02169 500 fatty acid (omega-1)-hydroxylase/midchain alkane h 99.94
PLN02196 463 abscisic acid 8'-hydroxylase 99.93
PLN02774 463 brassinosteroid-6-oxidase 99.93
KOG0157 497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 99.92
PLN03195 516 fatty acid omega-hydroxylase; Provisional 99.92
PLN02302 490 ent-kaurenoic acid oxidase 99.92
PLN02936 489 epsilon-ring hydroxylase 99.91
PLN02987 472 Cytochrome P450, family 90, subfamily A 99.91
PLN03141 452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 99.9
KOG0159 519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 99.89
PLN02738 633 carotene beta-ring hydroxylase 99.89
PLN02426 502 cytochrome P450, family 94, subfamily C protein 99.84
PLN02648 480 allene oxide synthase 99.81
KOG0684 486 consensus Cytochrome P450 [Secondary metabolites b 99.69
COG2124 411 CypX Cytochrome P450 [Secondary metabolites biosyn 99.46
KOG0114124 consensus Predicted RNA-binding protein (RRM super 86.17
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information 
Probab=100.00  E-value=3.7e-35  Score=250.64  Aligned_cols=226  Identities=29%  Similarity=0.474  Sum_probs=195.7

Q ss_pred             CCCCCCCCCCccccccc-------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC---
Q 048119           30 KHLPPGLRPYPVIGNLL-------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR---   99 (266)
Q Consensus        30 ~~~ppgp~~~p~~G~~~-------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~---   99 (266)
                      .+.||||+++|++||++       +..+.+++++|||++.+++|.      .++|+|+|+++++|++++++..|++|   
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~------~~~Vviss~~~akE~l~~~d~~fa~Rp~~   98 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGS------VPVVVISSYEAAKEVLVKQDLEFADRPDP   98 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecC------ceEEEECCHHHHHHHHHhCCccccCCCCc
Confidence            88899999999999998       789999999999999999999      99999999999999999999999888   


Q ss_pred             -------CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHHHHH
Q 048119          100 -------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSIN  172 (266)
Q Consensus       100 -------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~  172 (266)
                             ..++.|++++++|+.|+.+||.+...+|+...+++......++++.+++.+.+ .+.++++|+.+.+..++.+
T Consensus        99 ~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~n  177 (489)
T KOG0156|consen   99 TATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGN  177 (489)
T ss_pred             hhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHH
Confidence                   23678999998899999999999999999999999888889999999999987 3233789999999999999


Q ss_pred             HHHHHHhcCCccCcc---HHHHHHHHHHHHHHhCCCCccchhc-ccccCC-CcchHHHHHHHHHHHHHHHhhhhhcC---
Q 048119          173 LLPNTIFSIDLVHPN---ERKFKDTVWGMMEEAGKPNLSDHFP-LLKKLD-LQGTRHRNTLYAGEMFEVQEHGCSIS---  244 (266)
Q Consensus       173 vi~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~---  244 (266)
                      ||++++||.+++..+   ..++.+.+.+..+..+.+.+.+++| ++++++ ..+..++.....+++.+++++.|+++   
T Consensus       178 vI~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~  257 (489)
T KOG0156|consen  178 VICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREK  257 (489)
T ss_pred             HHHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999998743   3458888999999998888899999 677776 33566677777777888888888754   


Q ss_pred             ---CCCCCHHHHHHhcccccC
Q 048119          245 ---IKSKDMLDTVLNIIQDKS  262 (266)
Q Consensus       245 ---~~~~d~l~~ll~~~~~~~  262 (266)
                         ++.+|++|.||+..++++
T Consensus       258 ~~~~~~~D~vD~lL~~~~~~~  278 (489)
T KOG0156|consen  258 IGDEEGRDFVDALLKLMKEEK  278 (489)
T ss_pred             hccCCCCcHHHHHHHhhcccc
Confidence               223799999999865443

>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query266
4gqs_A 477 Structure Of Human Microsomal Cytochrome P450 (cyp) 2e-05
1r9o_A 477 Crystal Structure Of P4502c9 With Flurbiprofen Boun 2e-05
1og2_A 475 Structure Of Human Cytochrome P450 Cyp2c9 Length = 6e-05
1dt6_A 473 Structure Of Mammalian Cytochrome P450 2c5 Length = 7e-05
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19 Length = 477 Back     alignment and structure 
Iteration: 1

 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 9/57 (15%)
Query: 19 MASSFNSGGRRKHLPPGLRPYPVIGNLLH-------KSLAKLAKIHGPIMNLRLGVR 68
          MA   +SG  R  LPPG  P PVIGN+L        KSL  L+KI+GP+  L  G+ 
Sbjct: 1  MAKKTSSG--RGKLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLE 55
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound Length = 477 Back     alignment and structure
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9 Length = 475 Back     alignment and structure
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5 Length = 473 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query266
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 1e-34
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 2e-30
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 4e-28
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 6e-28
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 9e-20
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 6e-16
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 1e-15
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 8e-14
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 7e-13
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 4e-12
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 7e-12
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 3e-11
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 1e-10
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 2e-10
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 3e-10
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 8e-10
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 2e-09
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 1e-08
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 2e-08
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 2e-06
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 3e-06
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 1e-05
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 8e-05
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 2e-04
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
 Score =  128 bits (325), Expect = 1e-34
 Identities = 40/254 (15%), Positives = 79/254 (31%), Gaps = 33/254 (12%)

Query: 23  FNSGGRRKHLPPGLRP-YPVIGNLL------HKSLAKLAKIHGPIMNLRLGVRLSFNLVT 75
           +    RR++ PP  +   P +G+ L       K L ++ + HG I  +R           
Sbjct: 10  YGRRTRRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGL------Y 63

Query: 76  TVVVSSPSTAKAILKEHDSLFCDRKHHE-----FSLVWLPVSTLWRSYRKMCNMHIFNRQ 130
             V+   +   A+L +  SL             F+++    +      R   +       
Sbjct: 64  ITVLLDSNCYDAVLSDVASLDQTSYAQVLMKRIFNMILPSHNPESEKKRAEMHFQGA--- 120

Query: 131 KLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSINLLPNTIFSIDL--VHPNE 188
            L    +     ++ L+T  E   +  +    G        NL  + +F      V   E
Sbjct: 121 SLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDG------LFNLCYSLLFKTGYLTVFGAE 174

Query: 189 RKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFE--VQEHGCSISIK 246
                 +  + EE  +       P L +  +     +    A E     +   G     +
Sbjct: 175 NNNSAALTQIYEEFRR--FDKLLPKLARTTVNKEEKQIASAAREKLWKWLTPSGLDRKPR 232

Query: 247 SKDMLDTVLNIIQD 260
            +  L + +  +QD
Sbjct: 233 EQSWLGSYVKQLQD 246
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query266
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 99.97
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 99.96
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 99.96
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 99.96
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 99.96
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 99.96
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 99.95
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 99.95
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 99.95
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 99.95
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 99.95
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 99.95
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 99.95
3ld6_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.94
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 99.94
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 99.94
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 99.93
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.93
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 99.93
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 99.92
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 99.9
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 99.9
2cd8_A 436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 99.88
3v8d_A 491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 99.88
1jfb_A 404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 99.86
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 99.86
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 99.85
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 99.84
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 99.83
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.82
1cpt_A 428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 99.8
1ued_A 406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 99.8
2zbx_A 412 Cytochrome P450-SU1; beta prism, heme, iron, metal 99.8
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 99.79
1s1f_A 406 Putative cytochrome P450; cytochrome P450 oxidored 99.78
2jjn_A 411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 99.78
3tyw_A 417 Putative cytochrome P450; P450 monooxygenase, oxid 99.77
3oo3_A 384 OXY protein; cytochrome P450, monooxygenase, PCD-t 99.77
3aba_A 403 Cytochrome P450; oxidoreductase, heme, monooxygena 99.76
2wm5_A 435 CYP124, putative cytochrome P450 124; metal-bindin 99.75
3tkt_A 450 Cytochrome P450; aromatic hydrocarbon binding of P 99.75
3abb_A 408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.75
2zwu_A 415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 99.74
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.73
3ivy_A 433 Cytochrome P450 CYP125; cholesterol, monooxygenase 99.73
3ejb_B 404 Biotin biosynthesis cytochrome P450-like enzyme; p 99.73
1odo_A 408 Putative cytochrome P450 154A1; P450 monooxygenase 99.73
2z3t_A 425 Cytochrome P450; monoxygenase, oxydoreductase, hem 99.71
4fb2_A 398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 99.71
2y5n_A 417 MYCG, P-450-like protein; oxidoreductase, mycinami 99.71
3a4g_A 411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 99.71
2z36_A 413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 99.71
1z8o_A 404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 99.7
2xkr_A 398 CYP142, putative cytochrome P450 142; oxidoreducta 99.69
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.69
1q5d_A 419 P450 epoxidase; cytochrome P450, epothilone, oxydo 99.68
1gwi_A 411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 99.68
2dkk_A 411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 99.68
3r9b_A 418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 99.68
2xbk_A 404 PIMD protein; epoxidation, oxidoreductase; HET: HE 99.67
3lxh_A 421 Cytochrome P450; heme, iron, metal-binding, monoox 99.67
3buj_A 397 CALO2; heme, iron, metal-binding, monooxygenase, o 99.65
1lfk_A 398 OXYB, P450 monooxygenase; oxidative phenol couplin 99.64
2uuq_A 414 CYP130, cytochrome P450 130; iron, heme, monooxyge 99.64
3nc3_A 441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 99.63
1n40_A 396 P450 MT2, cytochrome P450 121; heme binding, oxyge 99.61
3oft_A 396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 99.61
3rwl_A 426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.56
2rfb_A 343 Cytochrome P450; heme, iron, metal-binding, monoox 99.56
3mgx_A 415 Putative P450 monooxygenase; cytochrome P450 oxida 99.56
1io7_A 368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.54
3b4x_A 367 367AA long hypothetical cytochrome P450; HEM prote 99.54
2wiy_A 394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.5
3p3o_A 416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.49
4dnj_A 412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.35
4dxy_A 417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 99.2
2yjn_B 381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 97.8
3lqv_A115 PRE-mRNA branch site protein P14; cysless mutant, 80.2
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
Probab=99.97  E-value=1e-29  Score=220.54  Aligned_cols=220  Identities=21%  Similarity=0.311  Sum_probs=169.4

Q ss_pred             CCCCCCCCCCCccccccc--------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC-
Q 048119           29 RKHLPPGLRPYPVIGNLL--------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR-   99 (266)
Q Consensus        29 ~~~~ppgp~~~p~~G~~~--------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~-   99 (266)
                      ..+.||||+++|++||++        +..+.+|+++|||++++++|+      .++|+|+||+++++++.+++..|.++ 
T Consensus         6 ~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~------~~~vvv~~p~~~k~il~~~~~~f~~rp   79 (494)
T 3swz_A            6 GAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGT------KTTVIVGHHQLAKEVLIKKGKDFSGRP   79 (494)
T ss_dssp             ------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETT------EEEEEECSHHHHHHHHTTTTTTTBBCC
T ss_pred             CCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCC------CCEEEECCHHHHHHHHHhCcHhhCCCC
Confidence            467899999999999987        567899999999999999999      99999999999999999888888877 


Q ss_pred             --------CCCCCcccccCCChhHHHHHHHHHhhhcch--hhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHH
Q 048119          100 --------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNR--QKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNT  169 (266)
Q Consensus       100 --------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~--~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~  169 (266)
                              ...+.|++++++|+.|+++||+++++ |+.  ..++.+.+.+.++++.+++.+.+.  .++++|+.+.+..+
T Consensus        80 ~~~~~~~~~~~~~gl~~~~~g~~wr~~Rr~~~~~-f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~  156 (494)
T 3swz_A           80 QMATLDIASNNRKGIAFADSGAHWQLHRRLAMAT-FALFKDGDQKLEKIICQEISTLCDMLATH--NGQSIDISFPVFVA  156 (494)
T ss_dssp             CCHHHHHHTTTTCSSSSSCSSHHHHHHHHHHHHH-TTTTSSSTTCHHHHHHHHHHHHHHHHHHT--TTEEECCHHHHHHH
T ss_pred             CcHHHHHhccCCCCeEeCCCCHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHHHHHHHHHHc--CCCcccHHHHHHHH
Confidence                    23366887777799999999999976 663  456789999999999999999764  46789999999999


Q ss_pred             HHHHHHHHHhcCCccCcc--HHHHHHHHHHHHHHhCCCCccchhcccccCCCcchHHHHHHHHHHHHHHHhhhhhc----
Q 048119          170 SINLLPNTIFSIDLVHPN--ERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSI----  243 (266)
Q Consensus       170 ~~~vi~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~----  243 (266)
                      ++|+|+.++||.+++..+  ...+......+........+.+.+|+++++|.. ..++..+..+.+.+++++++++    
T Consensus       157 t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~-~~~~~~~~~~~~~~~~~~~i~~~~~~  235 (494)
T 3swz_A          157 VTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNK-TLEKLKSHVKIRNDLLNKILENYKEK  235 (494)
T ss_dssp             HHHHHHHHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCCS-HHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcH-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999987654  122333333444444444567788998888732 3455666667777777776652    


Q ss_pred             --CCCCCCHHHHHHhcc
Q 048119          244 --SIKSKDMLDTVLNII  258 (266)
Q Consensus       244 --~~~~~d~l~~ll~~~  258 (266)
                        .+..+|+++.|+++.
T Consensus       236 ~~~~~~~d~l~~ll~~~  252 (494)
T 3swz_A          236 FRSDSITNMLDTLMQAK  252 (494)
T ss_dssp             CCTTCCCSHHHHHHHHH
T ss_pred             hcccchhHHHHHHHHHH
Confidence              123569999999864
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 266
d1r9oa_ 467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 1e-18
d1po5a_ 465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 2e-18
d3czha1 463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 1e-16
d2ciba1 445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 9e-16
d2ij2a1 453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 1e-14
d1tqna_ 472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 3e-14
d1izoa_ 411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 7e-07
d1n97a_ 385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 3e-05
d1ueda_ 403 a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatops 4e-05
d1odoa_ 401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 0.002
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome p450 2c9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.5 bits (202), Expect = 1e-18
 Identities = 43/223 (19%), Positives = 73/223 (32%), Gaps = 23/223 (10%)

Query: 29  RKHLPPGLRPYPVIGNLL-------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSS 81
           R  LPPG  P PVIGN+L        KSL  L+K++GP+  L  G++        VV+  
Sbjct: 1   RGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLK------PIVVLHG 54

Query: 82  PSTAKAILKEHDSLFCDRKHHEFSLVWLPVSTL-------WRSYRKMCNMHIFNRQKLDA 134
               K  L +    F  R     +        +       W+  R+   M + N      
Sbjct: 55  YEAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKR 114

Query: 135 SQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSINLLPNTIFSIDLVHPNE--RKFK 192
           S + R ++    L   E         D          N++ + IF     + ++      
Sbjct: 115 SIEDRVQEEARCLVE-ELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLM 173

Query: 193 DTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFE 235
           + +   ++    P +         +D     H   L      +
Sbjct: 174 EKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMK 216
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Length = 403 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query266
d2ij2a1 453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 99.96
d1tqna_ 472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 99.93
d2ciba1 445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 99.93
d1r9oa_ 467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 99.92
d3czha1 463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 99.9
d1po5a_ 465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 99.89
d1n97a_ 385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 99.81
d1izoa_ 411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 99.8
d1odoa_ 401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.63
d1ueda_ 403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.54
d1jfba_ 399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.53
d1gwia_ 403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.53
d1z8oa1 402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.51
d1s1fa_ 399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.43
d1q5da_ 401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 99.34
d1cpta_ 428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.31
d1re9a_ 404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.23
d1n40a_ 395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 99.21
d1lfka_ 394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.21
d1io7a_ 366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 98.82
d1ue8a_ 367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 98.53
d2f9da1114 Pre-mRNA branch site protein p14 {Human (Homo sapi 85.84
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Cytochrome P450 bm-3
species: Bacillus megaterium [TaxId: 1404]

Probab=99.96  E-value=1.2e-27  Score=203.31  Aligned_cols=218  Identities=15%  Similarity=0.068  Sum_probs=161.8

Q ss_pred             CCCCCCCCccccccc-------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC-----
Q 048119           32 LPPGLRPYPVIGNLL-------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR-----   99 (266)
Q Consensus        32 ~ppgp~~~p~~G~~~-------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~-----   99 (266)
                      .+|||+++|++||+.       +.++.+++++|||||++++++      .++|+++||+++++++.++...+..+     
T Consensus         2 ~iPGP~~~p~lG~l~~l~~~~~~~~~~~~~~kyG~if~~~~~~------~~~vvl~~~~~i~~v~~~~~~~~~~~~~~~~   75 (453)
T d2ij2a1           2 EMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPG------RVTRYLSSQRLIKEACDESRFDKNLSQALKF   75 (453)
T ss_dssp             CCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETT------EEEEEECCHHHHHHHTCTTTEEECCCHHHHH
T ss_pred             CCccCCCcchhhCHHHhCCCCHHHHHHHHHHHhCCEEEEEeCC------ceEEEECCHHHHHHHHhcCCcccccccHhHH
Confidence            479999999999997       778999999999999999999      99999999999999997665444443     


Q ss_pred             --CCCCCccccc-CCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHHHHHHHHH
Q 048119          100 --KHHEFSLVWL-PVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSINLLPN  176 (266)
Q Consensus       100 --~~~~~~l~~~-~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~  176 (266)
                        .+.|.|+++. .+|+.|+++||.+++. |+.++++.+.+.+.++++++++.|.+.. +++++|+.+++..+++|+++.
T Consensus        76 ~~~~~g~~~~~~~~~g~~wk~~Rk~l~~~-fs~~~l~~~~~~i~~~~~~li~~l~~~~-~~~~idl~~~~~~~~~~~i~~  153 (453)
T d2ij2a1          76 VRDFAGDGLFTSWTHEKNWKKAHNILLPS-FSQQAMKGYHAMMVDIAVQLVQKWERLN-ADEHIEVPEDMTRLTLDTIGL  153 (453)
T ss_dssp             HHHHHTTSGGGSCTTSHHHHHHHHHHGGG-GSTTTHHHHHHHHHHHHHHHHHHHHTCC-TTCCEEHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCcEEecCCChHHHHHHHHHHHHH-hhhhhhhhhhhhHHHHHHHHHHHhhhcC-CCCccchHHHHHHHhhhcchh
Confidence              2346677653 4699999999999976 9999999999999999999999997542 467899999999999999999


Q ss_pred             HHhcCCccCcc----HHHHHHHHHHHHHHhCCCCccchhcccccCCCcchHHHHHHHHHHHHHHHhhhhh----cCCCCC
Q 048119          177 TIFSIDLVHPN----ERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCS----ISIKSK  248 (266)
Q Consensus       177 ~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~----~~~~~~  248 (266)
                      ++||.+++...    ...+.+....+.......  ....|+...  .....++..+..+.+++++++.++    +.+...
T Consensus       154 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~  229 (453)
T d2ij2a1         154 CGFNYRFNSFYRDQPHPFITSMVRALDEAMNKL--QRANPDDPA--YDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD  229 (453)
T ss_dssp             HHHSCCCCGGGCSSCCHHHHHHHHHHHHHHHTC-----CTTSGG--GHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCS
T ss_pred             cccccccchhhhccchHHHHhhhhccchhhhhh--hhccccccc--chhhHHHHHHHHHHHHHHHHHHHhhhcccccccc
Confidence            99999886432    122233333232222221  112222111  123345566677777777777665    345677


Q ss_pred             CHHHHHHhccccc
Q 048119          249 DMLDTVLNIIQDK  261 (266)
Q Consensus       249 d~l~~ll~~~~~~  261 (266)
                      |+++.++++.+.+
T Consensus       230 d~l~~ll~~~~~~  242 (453)
T d2ij2a1         230 DLLTHMLNGKDPE  242 (453)
T ss_dssp             SHHHHHHHCCCTT
T ss_pred             chhhhhhhhcccc
Confidence            9999999876543
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure