Citrus Sinensis ID: 048151

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160----
Protein Sequence
MSPINSLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccccEEcccccccccEccccccccHHHHHHHHHHHHccccccccccccccEEEEEEEEEEEccEEEEEEEEEEccccEEEEEEEccccccccccccc
Coil and Loop (DISEMBL)
MSPINSLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSvshygenlawadydfTVDHIVKMWVDekqfydynsntcapnqmcghytQVVWRKSVRLGCakercnnnhqfiaicnydppgnaagerpf
Flexible Loop (DISEMBL)
MSPINSLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNydppgnaagerpf
Low Complexity Region (SEG)
MSPINSLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF
Disordered region (IsUnstruct)
*****SLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYD***********
Disordered Region (DISOPRED)
***INSLAIFHLVVLAARIH******ATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF
Disordered Region (DISEMBL)
MSPINSLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF
Disordered Region (DISPRO)
*SPINSLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGE***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSPINSLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	164	2.2.26 [Sep-21-2011]
P11670	177	Basic form of pathogenesi	N/A	no	0.908	0.841	0.555	7e-39
P07053	168	Pathogenesis-related prot	N/A	no	0.987	0.964	0.478	2e-38
P09042	168	Pathogenesis-related prot	N/A	no	0.987	0.964	0.478	3e-38
Q08697	175	Pathogenesis-related prot	N/A	no	0.902	0.845	0.54	3e-38
P08299	168	Pathogenesis-related prot	N/A	no	0.823	0.803	0.543	1e-37
P33154	161	Pathogenesis-related prot	no	no	0.926	0.944	0.493	7e-37
Q04108	159	Pathogenesis-related leaf	N/A	no	0.932	0.962	0.496	3e-34
Q41359	167	Pathogenesis-related prot	N/A	no	0.871	0.856	0.506	1e-33
Q00008	167	Pathogenesis-related prot	N/A	no	0.987	0.970	0.431	2e-33
Q05968	164	Pathogenesis-related prot	N/A	no	0.878	0.878	0.466	7e-33

>sp|P11670|PRB1_TOBAC Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1

 Score =  159 bits (402), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 85/153 (55%), Positives = 99/153 (64%), Gaps = 4/153 (2%)

Query: 12  LVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCI 71
            +  A  IH S A N+ Q  Y++ HN ARR VG+G  MTWD  L  +A +YA +   DC 
Sbjct: 11  FITFAILIHSSKAQNSPQD-YLNPHNAARRQVGVGP-MTWDNRLAAYAQNYANQRIGDCG 68

Query: 72  IEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSV 131
           + HS   YGENLA A         VKMWVDEK+FYDYNSN+C    +CGHYTQVVWR SV
Sbjct: 69  MIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCV-GGVCGHYTQVVWRNSV 127

Query: 132 RLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
           RLGCA+ R NN   FI  CNYDPPGN  G+RPF
Sbjct: 128 RLGCARVRSNNGWFFIT-CNYDPPGNFIGQRPF 159

Probably involved in the defense reaction of plants against pathogens.
Nicotiana tabacum (taxid: 4097)

>sp|P07053|PR1B_TOBAC Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1

 Score =  157 bits (398), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 79/165 (47%), Positives = 105/165 (63%), Gaps = 3/165 (1%)

Query: 1   MSPINSLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAH 60
            S + S  +   ++L   I  SS    +QQ Y+  HN AR +VG+   +TWD  +  +A 
Sbjct: 6   FSQMPSFFLVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEP-LTWDNGVAAYAQ 64

Query: 61  SYAQKLKVDCIIEHSVSHYGENLAWADYDF-TVDHIVKMWVDEKQFYDYNSNTCAPNQMC 119
           +Y  +L  DC + HS   YGENLA    DF T    V+MWVDEKQ+YD++SNTCA  Q+C
Sbjct: 65  NYVSQLAADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVC 124

Query: 120 GHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
           GHYTQVVWR SVR+GCA+ +CNN   ++  CNYDPPGN  G+ P+
Sbjct: 125 GHYTQVVWRNSVRVGCARVKCNNG-GYVVSCNYDPPGNVIGQSPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P09042|PR1C_TOBAC Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3

 Score =  157 bits (397), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 79/165 (47%), Positives = 106/165 (64%), Gaps = 3/165 (1%)

Query: 1   MSPINSLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAH 60
            S ++S  +   ++L   I  S     +QQ Y+  HN AR +VG+   +TWD  +  +A 
Sbjct: 6   FSQMSSFFLVSTLLLFLIISHSCHAQNSQQDYLDAHNTARADVGVE-PLTWDDQVAAYAQ 64

Query: 61  SYAQKLKVDCIIEHSVSHYGENLAWADYDF-TVDHIVKMWVDEKQFYDYNSNTCAPNQMC 119
           +YA +L  DC + HS   YGENLAW   DF T    V+MWV+EKQ+Y ++SNTCA  Q+C
Sbjct: 65  NYASQLAADCNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVC 124

Query: 120 GHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
           GHYTQVVWR SVR+GCA+ +CNN   +I  CNYDPPGN  G+ P+
Sbjct: 125 GHYTQVVWRNSVRVGCARVQCNNG-GYIVSCNYDPPGNVIGKSPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|Q08697|PR1A_SOLLC Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1

 Score =  157 bits (396), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 81/150 (54%), Positives = 98/150 (65%), Gaps = 2/150 (1%)

Query: 8   AIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLK 67
           +IF    +   I  SS     ++ +++ HN ARR VG+G  MTWD  L  +A +YA +  
Sbjct: 4   SIFVACFITFIIFHSSQAQTPRENFLNAHNAARRRVGVGP-MTWDDGLAAYAQNYANQRA 62

Query: 68  VDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVW 127
            DC + HS   YGENLA A         VKMW DEKQ+YDYNSNTCAP ++CGHYTQVVW
Sbjct: 63  DDCGMIHSDGPYGENLAAAFPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVW 122

Query: 128 RKSVRLGCAKERCNNNHQFIAICNYDPPGN 157
           RKSVRLGCA+ RCN+   FI  CNYDPPGN
Sbjct: 123 RKSVRLGCARVRCNSGWVFI-TCNYDPPGN 151

Probably involved in the defense reaction of plants against pathogens.

Solanum lycopersicum (taxid: 4081)

>sp|P08299|PR1A_TOBAC Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1

 Score =  155 bits (392), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 75/138 (54%), Positives = 96/138 (69%), Gaps = 3/138 (2%)

Query: 28  TQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWAD 87
           +QQ Y+  HN AR +VG+   +TWD  +  +A +YA +L  DC + HS   YGENLA   
Sbjct: 33  SQQDYLDAHNTARADVGVEP-LTWDDQVAAYAQNYASQLAADCNLVHSHGQYGENLAEGS 91

Query: 88  YDF-TVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQF 146
            DF T    V+MWVDEKQ+YD++SNTCA  Q+CGHYTQVVWR SVR+GCA+ +CNN   +
Sbjct: 92  GDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVQCNNGG-Y 150

Query: 147 IAICNYDPPGNAAGERPF 164
           +  CNYDPPGN  GE P+
Sbjct: 151 VVSCNYDPPGNYRGESPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P33154|PR1_ARATH Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1

 Score =  152 bits (385), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 77/156 (49%), Positives = 99/156 (63%), Gaps = 4/156 (2%)

Query: 9   IFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKV 68
           +   V L   + L S    + Q Y+ +HN+AR  VG+G  M WD+ +  +A SYA++L+ 
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGP-MQWDERVAAYARSYAEQLRG 68

Query: 69  DCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWR 128
           +C + HS   YGENLAW   D +    V MWV EK  Y+Y +NTC  N +CGHYTQVVWR
Sbjct: 69  NCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWR 126

Query: 129 KSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
           KSVRLGCAK RCNN    I+ CNYDP GN   E+P+
Sbjct: 127 KSVRLGCAKVRCNNGGTIIS-CNYDPRGNYVNEKPY 161

Partially responsible for acquired pathogen resistance.

Arabidopsis thaliana (taxid: 3702)

>sp|Q04108|PR04_SOLLC Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1

 Score =  144 bits (362), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/159 (49%), Positives = 99/159 (62%), Gaps = 6/159 (3%)

Query: 6   SLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQK 65
           SL +  L+VLA   H   A N+ Q  Y+ +HN+AR  VG+G  M+WD  L   A +YA  
Sbjct: 7   SLLLTCLMVLAI-FHSCEAQNSPQD-YLAVHNDARAQVGVGP-MSWDANLASRAQNYANS 63

Query: 66  LKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQV 125
              DC + HS +  GENLA    DFT    V++WV E+  Y+Y +N C   +MCGHYTQV
Sbjct: 64  RAGDCNLIHSGA--GENLAKGGGDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQV 121

Query: 126 VWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
           VWR SVRLGC + RCNN   FI+ CNYDP GN  GERP+
Sbjct: 122 VWRNSVRLGCGRARCNNGWWFIS-CNYDPVGNWVGERPY 159

Probably involved in the defense reaction of plants against pathogens.

Solanum lycopersicum (taxid: 4081)

>sp|Q41359|PR1_SAMNI Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1

 Score =  142 bits (357), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/148 (50%), Positives = 96/148 (64%), Gaps = 5/148 (3%)

Query: 19  IHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSV-S 77
           +  S A N+ Q  YV  HN AR  V +G  +TWD+++   A  YAQ    DC + HS   
Sbjct: 23  VQYSVAQNSPQD-YVDAHNAARSAVNVGP-VTWDESVAAFARQYAQSRAGDCRLVHSGDP 80

Query: 78  HYGENLAWAD-YDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCA 136
            YGENLA+   ++ T  + V MWV E+  Y+ N+NTCAP ++CGHYTQVVWR SVR+GCA
Sbjct: 81  RYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVWRNSVRIGCA 140

Query: 137 KERCNNNHQFIAICNYDPPGNAAGERPF 164
           + RCNN   FI  CNY PPGN AG+RP+
Sbjct: 141 RVRCNNGAWFI-TCNYSPPGNYAGQRPY 167

Probably involved in the defense reaction of plants against pathogens.

Sambucus nigra (taxid: 4202)

>sp|Q00008|PRMS_MAIZE Pathogenesis-related protein PRMS OS=Zea mays GN=PRMS PE=2 SV=1

 Score =  141 bits (355), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/169 (43%), Positives = 103/169 (60%), Gaps = 7/169 (4%)

Query: 1   MSPINSLAIFHL-VVLAAR--IHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLED 57
           M   N LA+  L +V+AA   +H S + N+ Q  Y+   N AR  VG+G  +TW   L+ 
Sbjct: 1   MEASNKLAVLLLWLVMAAATAVHPSYSENSPQD-YLTPQNSARAAVGVGP-VTWSTKLQQ 58

Query: 58  HAHSYAQKLKVDCIIEHSVSHYGENLAW--ADYDFTVDHIVKMWVDEKQFYDYNSNTCAP 115
            A  YA +   DC ++HS   YGEN+ W  A +D+     V+ WVDEKQ+Y+Y +N+CA 
Sbjct: 59  FAEKYAAQRAGDCRLQHSGGPYGENIFWGSAGFDWKAVDAVRSWVDEKQWYNYATNSCAA 118

Query: 116 NQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
            ++CGHYTQVVWR +  +GCA+  C +N     ICNY+P GN AG +P+
Sbjct: 119 GKVCGHYTQVVWRATTSIGCARVVCRDNRGVFIICNYEPRGNIAGMKPY 167

Probably involved in the defense reaction of plants against pathogens.

Zea mays (taxid: 4577)

>sp|Q05968|PR1_HORVU Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1

 Score =  139 bits (350), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 69/148 (46%), Positives = 91/148 (61%), Gaps = 4/148 (2%)

Query: 19  IHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSH 78
           ++LS A N+ Q  YV  HN AR  VG+G  ++W   L+  A +YA +   DC ++HS   
Sbjct: 19  VNLSQAQNSPQD-YVSPHNAARSAVGVG-AVSWSTKLQAFAQNYANQRINDCKLQHSGGP 76

Query: 79  YGENLAW--ADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCA 136
           YGEN+ W  A  D+     V  WV EK+ YDY SNTCA  ++CGHYTQVVWR S  +GCA
Sbjct: 77  YGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGCA 136

Query: 137 KERCNNNHQFIAICNYDPPGNAAGERPF 164
           +  CNNN      CNY+P GN  G++P+
Sbjct: 137 RVVCNNNRGVFITCNYEPRGNIIGQKPY 164

Probably involved in the defense reaction of plants against pathogens.

Hordeum vulgare (taxid: 4513)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
255562116	166	STS14 protein precursor, putative [Ricin	0.987	0.975	0.509	7e-43
224105801	161	predicted protein [Populus trichocarpa]	0.975	0.993	0.512	4e-41
255562124	162	STS14 protein precursor, putative [Ricin	0.945	0.956	0.534	4e-41
224105795	161	predicted protein [Populus trichocarpa]	0.975	0.993	0.518	5e-41
224100397	161	predicted protein [Populus trichocarpa]	0.975	0.993	0.512	5e-41
224150051	161	predicted protein [Populus trichocarpa]	0.975	0.993	0.512	7e-41
388499004	183	unknown [Medicago truncatula]	0.969	0.868	0.490	3e-40
17221641	168	PR-1 [Solanum torvum]	0.896	0.875	0.534	7e-40
19970	179	prb-1b [Nicotiana tabacum]	0.914	0.837	0.562	1e-39
76873802	166	putative basic PR1 [Pisum sativum]	0.957	0.945	0.496	3e-39

>gi|255562116|ref|XP_002522066.1| STS14 protein precursor, putative [Ricinus communis] gi|223538665|gb|EEF40266.1| STS14 protein precursor, putative [Ricinus communis]

 Score =  178 bits (451), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 83/163 (50%), Positives = 106/163 (65%), Gaps = 1/163 (0%)

Query: 3   PINSLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIG-MTWDKTLEDHAHS 61
           P  SL +F+ ++++  +  SS    T Q Y++ HN+AR  VG G+G MTW++T+ D+A  
Sbjct: 4   PKVSLPLFYFMIMSLALLFSSNAQDTNQDYINSHNDARVAVGAGLGNMTWNETVADYARD 63

Query: 62  YAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGH 121
           YA +   DC + HS   YGENLAW   D +    V+MWVDEK FYDYNSNTC   Q CGH
Sbjct: 64  YANQRIADCNLVHSDGPYGENLAWGSGDLSGLDAVRMWVDEKAFYDYNSNTCTGGQQCGH 123

Query: 122 YTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
           YTQVVWR S+ LGCAK  CNN    +  CNY PPGN  G+RP+
Sbjct: 124 YTQVVWRDSISLGCAKVTCNNGLGTLITCNYYPPGNVIGQRPY 166

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105801|ref|XP_002313935.1| predicted protein [Populus trichocarpa] gi|222850343|gb|EEE87890.1| predicted protein [Populus trichocarpa]

 Score =  172 bits (436), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 84/164 (51%), Positives = 106/164 (64%), Gaps = 4/164 (2%)

Query: 1   MSPINSLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAH 60
           MS   SLA F L+ L+  + L S      Q Y+  HN AR  VG+G  +TWD T++ +A 
Sbjct: 2   MSSKISLAFFTLITLS--LILPSRAQDNPQDYLDAHNTARAAVGVGP-LTWDTTVQAYAQ 58

Query: 61  SYAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCG 120
           +YA +   DC + HS   YGEN+AW+  D +    VKMWVDEK +YDYNSN+CA  Q CG
Sbjct: 59  NYANQRAGDCNLIHSGGPYGENIAWSSADLSGTDAVKMWVDEKAYYDYNSNSCAAGQQCG 118

Query: 121 HYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
           HYTQVVWR S RLGCAK +C+    FI  CNYDPPGN  G++P+
Sbjct: 119 HYTQVVWRNSARLGCAKVKCSTGGTFIG-CNYDPPGNVVGQKPY 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562124|ref|XP_002522070.1| STS14 protein precursor, putative [Ricinus communis] gi|223538669|gb|EEF40270.1| STS14 protein precursor, putative [Ricinus communis]

 Score =  172 bits (436), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 85/159 (53%), Positives = 108/159 (67%), Gaps = 4/159 (2%)

Query: 6   SLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQK 65
           SLA+  ++ +A  +  SS    TQQ Y++ HN AR +VG+G  +TWD  +  +A  +A +
Sbjct: 7   SLALVCIISIA--LIFSSHAQDTQQDYLNAHNSARGDVGLGP-LTWDDKVASYAQHHANQ 63

Query: 66  LKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQV 125
            K DC + HS   YGENLAW+  D +    VKMW+DEK +YDYNSN+CA  Q+CGHYTQV
Sbjct: 64  HKSDCSLVHSEGPYGENLAWSSGDLSGTDAVKMWIDEKPYYDYNSNSCASGQICGHYTQV 123

Query: 126 VWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
           VWR SVRLGCAK  CNN   FI  CNYDPPGN  G+RP+
Sbjct: 124 VWRSSVRLGCAKVSCNNGGTFIG-CNYDPPGNYIGQRPY 161

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105795|ref|XP_002313934.1| predicted protein [Populus trichocarpa] gi|222850342|gb|EEE87889.1| predicted protein [Populus trichocarpa]

 Score =  172 bits (435), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 85/164 (51%), Positives = 106/164 (64%), Gaps = 4/164 (2%)

Query: 1   MSPINSLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAH 60
           MS   SLA F L+ L+  + L S      Q Y+  HN AR  VG+G  +TWD T++ +A 
Sbjct: 2   MSSNISLAFFTLITLS--LILPSRAQDNPQDYLDAHNAARAAVGVGP-LTWDTTVQAYAQ 58

Query: 61  SYAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCG 120
           +YA +   DC + HS   YGENLAW+  D +    VKMWVDEK +YDYNSN+CA  Q CG
Sbjct: 59  NYANQRAGDCNLIHSGGPYGENLAWSSADLSGTDAVKMWVDEKAYYDYNSNSCAAGQQCG 118

Query: 121 HYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
           HYTQVVWR S RLGCAK +C+    FI  CNYDPPGN  G++P+
Sbjct: 119 HYTQVVWRNSARLGCAKVKCSTGGTFIG-CNYDPPGNYVGQKPY 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100397|ref|XP_002334377.1| predicted protein [Populus trichocarpa] gi|118485875|gb|ABK94784.1| unknown [Populus trichocarpa] gi|118488561|gb|ABK96093.1| unknown [Populus trichocarpa] gi|222871723|gb|EEF08854.1| predicted protein [Populus trichocarpa]

 Score =  172 bits (435), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 84/164 (51%), Positives = 106/164 (64%), Gaps = 4/164 (2%)

Query: 1   MSPINSLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAH 60
           MS   SLA F L+ L+  + L S      Q Y+  HN AR  VG+G  +TWD T++ +A 
Sbjct: 2   MSSKISLAFFTLITLS--LILPSRAQDNPQDYLDAHNAARAAVGVGP-LTWDTTVQAYAQ 58

Query: 61  SYAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCG 120
           +YA +   DC + HS   YGEN+AW+  D +    VKMWVDEK +YDYNSN+CA  Q CG
Sbjct: 59  NYANQRAGDCNLVHSGGPYGENIAWSSADLSGTDAVKMWVDEKAYYDYNSNSCAAGQQCG 118

Query: 121 HYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
           HYTQVVWR S RLGCAK +C+    FI  CNYDPPGN  G++P+
Sbjct: 119 HYTQVVWRNSARLGCAKVKCSTGGTFIG-CNYDPPGNYVGQKPY 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224150051|ref|XP_002336902.1| predicted protein [Populus trichocarpa] gi|222837091|gb|EEE75470.1| predicted protein [Populus trichocarpa]

 Score =  171 bits (434), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 84/164 (51%), Positives = 106/164 (64%), Gaps = 4/164 (2%)

Query: 1   MSPINSLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAH 60
           MS   SLA F L+ L+  + L S      Q Y+  HN AR  VG+G  +TWD T++ +A 
Sbjct: 2   MSSKISLAFFTLITLS--LILPSRAQDNPQDYLDAHNAARAAVGVGP-LTWDTTVQAYAQ 58

Query: 61  SYAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCG 120
           +YA +   DC + HS   YGEN+AW+  D +    VKMWVDEK +YDYNSN+CA  Q CG
Sbjct: 59  NYANQRAGDCNLVHSGGPYGENIAWSSADLSGADAVKMWVDEKAYYDYNSNSCAAGQQCG 118

Query: 121 HYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
           HYTQVVWR S RLGCAK +C+    FI  CNYDPPGN  G++P+
Sbjct: 119 HYTQVVWRNSARLGCAKVKCSTGGTFIG-CNYDPPGNYVGQKPY 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499004|gb|AFK37568.1| unknown [Medicago truncatula]

 Score =  169 bits (428), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 79/161 (49%), Positives = 106/161 (65%), Gaps = 2/161 (1%)

Query: 4   INSLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYA 63
           I+ L     ++LA    +S A N+ Q  Y+ +HN+AR +VG+G  ++WD  +  +A +Y 
Sbjct: 6   ISHLLPLMAILLATLTQISYAQNSPQD-YLKIHNKARSDVGVGP-ISWDAKVASYAETYV 63

Query: 64  QKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYT 123
            KLK +C + HS   YGENLAW+  D T    V MW+ EK++Y+YNSN+CA    CGHYT
Sbjct: 64  NKLKANCKMVHSKGPYGENLAWSSGDMTGTAAVTMWIGEKKYYNYNSNSCAVGYQCGHYT 123

Query: 124 QVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
           QVVWR SVR+GCAK +CN+    I  CNYDPPGN  G+RPF
Sbjct: 124 QVVWRDSVRVGCAKVKCNDGRSTIISCNYDPPGNYIGQRPF 164

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|17221641|dbj|BAB78476.1| PR-1 [Solanum torvum]

 Score =  168 bits (426), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 85/159 (53%), Positives = 105/159 (66%), Gaps = 12/159 (7%)

Query: 6   SLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQK 65
           + AIFH          SS     Q+ +++ HN ARR VG+G  MTWD TL  +A +YA +
Sbjct: 6   TFAIFH----------SSQAQTPQENFLNAHNAARRRVGVGP-MTWDNTLAAYAQNYANQ 54

Query: 66  LKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQV 125
              DC+++HS   YGENLA A         VKMW DEKQ+YDYNSNTCAP ++CGHYTQV
Sbjct: 55  RIGDCMMQHSDGPYGENLAAAFPQLNAAGAVKMWEDEKQWYDYNSNTCAPGKVCGHYTQV 114

Query: 126 VWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
           VWR SVRLGCA+ RC++   FI  CNYDPPGN  G+RP+
Sbjct: 115 VWRNSVRLGCARVRCSSGWVFI-TCNYDPPGNYIGQRPY 152

Source: Solanum torvum

Species: Solanum torvum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|19970|emb|CAA47374.1| prb-1b [Nicotiana tabacum]

 Score =  167 bits (424), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 86/153 (56%), Positives = 100/153 (65%), Gaps = 3/153 (1%)

Query: 12  LVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCI 71
            +  A   H S A N+ Q  Y++ HN ARR VG+G  MTWD  L   A +YA +   DC 
Sbjct: 11  FITFAILFHSSQAQNSPQD-YLNPHNAARRQVGVGP-MTWDNRLAAFAQNYANQRAGDCR 68

Query: 72  IEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSV 131
           ++HS   YGENLA A         VKMWVDEKQFY+YNSNTCA   +CGHYTQVVWR SV
Sbjct: 69  MQHSGGPYGENLAAAYPQLHAAGAVKMWVDEKQFYNYNSNTCAAGNVCGHYTQVVWRNSV 128

Query: 132 RLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
           RLGCA+ RCNN   FI  CNYDPPGN  G+RP+
Sbjct: 129 RLGCARVRCNNGWYFI-TCNYDPPGNWRGQRPY 160

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|76873802|emb|CAE51954.1| putative basic PR1 [Pisum sativum]

 Score =  166 bits (421), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 80/161 (49%), Positives = 105/161 (65%), Gaps = 4/161 (2%)

Query: 3   PINSL--AIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAH 60
           P++SL   +  ++VL+    +S A N+ Q  YV++HN+AR  VG+G  + WD  L  +A 
Sbjct: 4   PMSSLLLPLMAILVLSTSTQISYAQNSPQS-YVNIHNKARSEVGVGP-INWDTKLASYAQ 61

Query: 61  SYAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCG 120
           +Y  KLK +C + HS   YGENLAW   D T    V MW+ EK++Y+YNSN+CA    CG
Sbjct: 62  NYINKLKANCQMVHSRGPYGENLAWGSGDITGTGAVNMWIGEKRYYNYNSNSCAAGYQCG 121

Query: 121 HYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGE 161
           HYTQVVWR SVR+GCAK +CNN    I  CNYDPPGN  G+
Sbjct: 122 HYTQVVWRNSVRVGCAKVKCNNGRSTIISCNYDPPGNYNGQ 162

Source: Pisum sativum

Species: Pisum sativum

Genus: Pisum

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
TAIR|locus:2134178	163	AT4G33720 "AT4G33720" [Arabido	0.926	0.932	0.506	2.6e-38
TAIR|locus:2064294	161	PR1 "AT2G14610" [Arabidopsis t	0.926	0.944	0.5	1.7e-36
TAIR|locus:2055240	161	PRB1 "AT2G14580" [Arabidopsis	0.908	0.925	0.512	2.1e-36
TAIR|locus:2091196	161	AT3G19690 "AT3G19690" [Arabido	0.920	0.937	0.464	2.2e-34
TAIR|locus:2005537	176	PR-1-LIKE "AT2G19990" [Arabido	0.853	0.795	0.472	2e-33
TAIR|locus:2031055	161	AT1G50060 "AT1G50060" [Arabido	0.963	0.981	0.439	2.6e-31
TAIR|locus:2180662	166	AT5G26130 "AT5G26130" [Arabido	0.969	0.957	0.436	6.9e-31
TAIR|locus:2075039	186	AT3G09590 "AT3G09590" [Arabido	0.896	0.790	0.407	1.8e-30
TAIR|locus:2134283	166	AT4G33710 "AT4G33710" [Arabido	0.975	0.963	0.409	1e-29
TAIR|locus:2035317	241	AT1G01310 "AT1G01310" [Arabido	0.884	0.601	0.425	5.6e-29

TAIR|locus:2134178 AT4G33720 "AT4G33720" [Arabidopsis thaliana (taxid:3702)]

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 80/158 (50%), Positives = 104/158 (65%)

Query:     7 LAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKL 66
             LAI   +VL   +HL + ++   Q ++ +HN AR  VG+G  + WD+ +  +A +YA + 
Sbjct:    12 LAITFFLVLI--VHLKAQDSP--QDFLAVHNRARAEVGVG-PLRWDEKVAAYARNYANQR 66

Query:    67 KVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVV 126
             K DC ++HS   YGEN+AW+    T    V MWVDE+  YDY+SNTCA ++ CGHYTQVV
Sbjct:    67 KGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVV 126

Query:   127 WRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
             WR S RLGCAK RCNN   FI  CNYDPPGN  GE P+
Sbjct:   127 WRNSERLGCAKVRCNNGQTFIT-CNYDPPGNWVGEWPY 163

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2064294 PR1 "AT2G14610" [Arabidopsis thaliana (taxid:3702)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 79/158 (50%), Positives = 101/158 (63%)

Query:     7 LAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKL 66
             L +F  V L   + L S    + Q Y+ +HN+AR  VG+G  M WD+ +  +A SYA++L
Sbjct:    10 LIVF--VALVGALVLPSKAQDSPQDYLRVHNQARGAVGVG-PMQWDERVAAYARSYAEQL 66

Query:    67 KVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVV 126
             + +C + HS   YGENLAW   D +    V MWV EK  Y+Y +NTC  N +CGHYTQVV
Sbjct:    67 RGNCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVV 124

Query:   127 WRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
             WRKSVRLGCAK RCNN    I+ CNYDP GN   E+P+
Sbjct:   125 WRKSVRLGCAKVRCNNGGTIIS-CNYDPRGNYVNEKPY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0009627 "systemic acquired resistance" evidence=IEP;RCA

GO:0005618 "cell wall" evidence=IDA

GO:0010266 "response to vitamin B1" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0009414 "response to water deprivation" evidence=IEP

GO:0006952 "defense response" evidence=TAS

TAIR|locus:2055240 PRB1 "AT2G14580" [Arabidopsis thaliana (taxid:3702)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 80/156 (51%), Positives = 105/156 (67%)

Query:    12 LVVLAARIH-LSSANNA--TQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKV 68
             L++LAA +  L     A  +QQ YV+ HN+AR  +G+G  M WD+ L  +A +YA +LK 
Sbjct:    10 LIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVG-PMQWDEGLAAYARNYANQLKG 68

Query:    69 DCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWR 128
             DC + HS   YGENLA +  D +    V +WV+EK  Y+Y++NTC  N +CGHYTQVVWR
Sbjct:    69 DCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWR 126

Query:   129 KSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
              SVRLGCAK RCNN    I+ CNYDPPGN A ++P+
Sbjct:   127 NSVRLGCAKVRCNNGGTIIS-CNYDPPGNYANQKPY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0009723 "response to ethylene stimulus" evidence=IEP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

TAIR|locus:2091196 AT3G19690 "AT3G19690" [Arabidopsis thaliana (taxid:3702)]

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 72/155 (46%), Positives = 98/155 (63%)

Query:    12 LVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCI 71
             L +LA  +   S     QQ+++  HNEAR  VG+   + WD  +  +A SYA +   DC 
Sbjct:     9 LFLLAIALFYGSLAEDLQQQFLEAHNEARNEVGLD-PLVWDDEVAAYAASYANQRINDCA 67

Query:    72 IEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCA-PNQ-MCGHYTQVVWRK 129
             + HS   +GEN+A +  + + +   +MW++EKQ+YDY+SNTC  PN   C HYTQVVW+ 
Sbjct:    68 LVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWKN 127

Query:   130 SVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
             +VRLGCAK  CN+   FI  CNYDPPGN  GE+PF
Sbjct:   128 TVRLGCAKVVCNSGGTFIT-CNYDPPGNYIGEKPF 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2005537 PR-1-LIKE "AT2G19990" [Arabidopsis thaliana (taxid:3702)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 69/146 (47%), Positives = 95/146 (65%)

Query:    22 SSANNATQ-QRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYG 80
             ++AN   + Q  + +HN+AR  VG+G  M W++TL  +A SYA +   DC ++HS+  +G
Sbjct:    34 ANANGDVKPQETLVVHNKARAMVGVG-PMVWNETLATYAQSYAHERARDCAMKHSLGPFG 92

Query:    81 ENLA--WADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKE 138
             ENLA  W      V    + W+ EK+ YDY+SNTC  + +CGHYTQ+VWR SVRLGCA  
Sbjct:    93 ENLAAGWGTMSGPV--ATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASV 150

Query:   139 RCNNNHQFIAICNYDPPGNAAGERPF 164
             RC N+     IC+YDPPGN  G+RP+
Sbjct:   151 RCKNDEYIWVICSYDPPGNYIGQRPY 176

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0042742 "defense response to bacterium" evidence=IEP

TAIR|locus:2031055 AT1G50060 "AT1G50060" [Arabidopsis thaliana (taxid:3702)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 72/164 (43%), Positives = 97/164 (59%)

Query:     4 INSLAIFHLVVLAARIHLSSANNA--TQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHS 61
             +N+     LV++A    L  A NA  T Q Y++ HN AR  VG+   + WD TL  +A +
Sbjct:     1 MNTFKTPFLVIVAISF-LVVATNAQNTPQDYLNSHNTARAQVGVP-NVVWDTTLAAYALN 58

Query:    62 YAQKLKVDCIIEHSVSHYGENLA-WADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCG 120
             Y+   K DC + HS   YGENLA  +   F+    VK+WVDEK +Y Y  N C   + C 
Sbjct:    59 YSNFRKADCNLVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCL 118

Query:   121 HYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
             HYTQVVWR SV++GCA+ +C N   F++ CNY+ PGN  GE P+
Sbjct:   119 HYTQVVWRDSVKIGCARVQCTNTWWFVS-CNYNSPGNWVGEYPY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2180662 AT5G26130 "AT5G26130" [Arabidopsis thaliana (taxid:3702)]

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 72/165 (43%), Positives = 96/165 (58%)

Query:     2 SPINSLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHS 61
             SP   +    ++ LA  + L + +    Q Y+  HN AR  VG+   M W    E +A +
Sbjct:     6 SPQTLILSVIVLFLAFAVPLKAQDQP--QDYLDEHNRARTQVGVP-PMKWHAGAEQYAWN 62

Query:    62 YAQKLKVDCIIEHSVSH--YGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMC 119
             YAQ+ K DC + HS S+  YGENLAW+    +    VK+WV+EK  Y Y SNTC+  + C
Sbjct:    63 YAQQRKGDCSLTHSNSNGLYGENLAWSGGALSGAEAVKLWVNEKSDYIYASNTCSDGKQC 122

Query:   120 GHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
             GHYTQVVWR S  +GCAK +C+N   F+  CNY PPGN  G  P+
Sbjct:   123 GHYTQVVWRTSEWVGCAKVKCDNGGTFVT-CNYYPPGNYRGRWPY 166

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2075039 AT3G09590 "AT3G09590" [Arabidopsis thaliana (taxid:3702)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 62/152 (40%), Positives = 95/152 (62%)

Query:    16 AARIHLSSANNATQQR-YVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEH 74
             AAR+ ++ A  A   R ++  HN+AR + G+   + WD+ L   A  +A++ K DC + H
Sbjct:    37 AARL-VNRARRAKLSREFLQAHNDARVSSGVPT-LGWDRDLARFADKWAKQRKSDCSMIH 94

Query:    75 SVSHYGENLAW--ADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVR 132
             S   YGEN+ W      ++ + +V  W +E+  YD  +NTCAP +MCGHYTQ+VWR++  
Sbjct:    95 SGGPYGENIFWHRRKKTWSPEKVVTRWFEERFNYDVKTNTCAPGKMCGHYTQMVWRETTA 154

Query:   133 LGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
             +GCA+ +C+N   ++ +C YDP GN  GERPF
Sbjct:   155 VGCARVKCHNGRGYLVVCEYDPRGNYEGERPF 186

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2134283 AT4G33710 "AT4G33710" [Arabidopsis thaliana (taxid:3702)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 68/166 (40%), Positives = 97/166 (58%)

Query:     1 MSPINSLAIFHLVVLAARIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAH 60
             +SP   + +   +VLA  + L + +   +Q Y+ +HN AR +V +   + W      +A 
Sbjct:     5 ISPQTLVLLALALVLAFAVPLKAQDR--RQDYLDVHNHARDDVSVP-HIKWHAGAARYAW 61

Query:    61 SYAQKLKVDCIIEHSVSH--YGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQM 118
             +YAQ+ K DC + HS S   YGENLAW+  D +    V++WV EK  Y + SNTC   + 
Sbjct:    62 NYAQRRKRDCRLIHSNSRGRYGENLAWSSGDMSGAAAVRLWVREKSDYFHKSNTCRAGKQ 121

Query:   119 CGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
             CGHYTQVVW+ S  +GCAK +C+N   F+  CNY  PGN  G RP+
Sbjct:   122 CGHYTQVVWKNSEWVGCAKVKCDNGGTFVT-CNYSHPGNVRGRRPY 166

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2035317 AT1G01310 "AT1G01310" [Arabidopsis thaliana (taxid:3702)]

 Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 63/148 (42%), Positives = 84/148 (56%)

Query:    18 RIHLSSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS 77
             RI   +  N   + ++  HN  R  VG      WD  L  +A ++A +   DC + HS  
Sbjct:    74 RIRRRNRVNRASREFLIAHNLVRARVGEP-PFQWDGRLAAYARTWANQRVGDCRLVHSNG 132

Query:    78 HYGENLAWADYD-FTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCA 136
              YGEN+ WA  + ++   IV +W DE +FYD   NTC P  MCGHYTQ+VWR S ++GCA
Sbjct:   133 PYGENIFWAGKNNWSPRDIVNVWADEDKFYDVKGNTCEPQHMCGHYTQIVWRDSTKVGCA 192

Query:   137 KERCNNNHQFIAICNYDPPGNAAGERPF 164
                C+N   + AIC Y+PPGN  GE PF
Sbjct:   193 SVDCSNGGVY-AICVYNPPGNYEGENPF 219

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q08697	PR1A_SOLLC	No assigned EC number	0.54	0.9024	0.8457	N/A	no
Q41359	PR1_SAMNI	No assigned EC number	0.5067	0.8719	0.8562	N/A	no
P08299	PR1A_TOBAC	No assigned EC number	0.5434	0.8231	0.8035	N/A	no
P11670	PRB1_TOBAC	No assigned EC number	0.5555	0.9085	0.8418	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0001072301 hypothetical protein (162 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	164
cd05381	136	cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like ex	3e-61
smart00198	144	smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 fa	3e-35
cd00168	122	cd00168, SCP, SCP: SCP-like extracellular protein	4e-34
cd05559	136	cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracel	2e-31
cd05382	132	cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-lik	3e-31
cd05380	144	cd05380, SCP_euk, SCP_euk: SCP-like extracellular	5e-28
cd05384	129	cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like ex	2e-26
cd05385	144	cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-l	2e-26
pfam00188	121	pfam00188, CAP, Cysteine-rich secretory protein fa	1e-18
cd05383	138	cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellu	2e-18

>gnl|CDD|240181 cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

 Score =  185 bits (471), Expect = 3e-61
 Identities = 66/137 (48%), Positives = 86/137 (62%), Gaps = 2/137 (1%)

Query: 29  QQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWADY 88
            Q ++  HN AR  VG+   + WD TL  +A  YA + + DC + HS   YGENL W   
Sbjct: 1   PQDFLDAHNAARAAVGVP-PLKWDDTLAAYAQRYANQRRGDCALVHSNGPYGENLFWGSG 59

Query: 89  D-FTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFI 147
             ++    V  WV EK++YDY+SNTCA  +MCGHYTQVVWR + R+GCA+  C+N     
Sbjct: 60  GNWSAADAVASWVSEKKYYDYDSNTCAAGKMCGHYTQVVWRNTTRVGCARVTCDNGGGVF 119

Query: 148 AICNYDPPGNAAGERPF 164
            ICNYDPPGN  G+RP+
Sbjct: 120 IICNYDPPGNYIGQRPY 136

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|214553 smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

 Score =  119 bits (301), Expect = 3e-35
 Identities = 55/148 (37%), Positives = 71/148 (47%), Gaps = 24/148 (16%)

Query: 27  ATQQRYVHLHNEARRNVGIGIG----------MTWDKTLEDHAHSYAQKLKVDCIIEHSV 76
           A QQ  +  HN+ R  V  G            +TWD  L   A ++A +    C   HS 
Sbjct: 1   AQQQEILDAHNKLRSQVAGGFLAAPAASNMLKLTWDCELASSAQNWANQ----CPFGHST 56

Query: 77  SH--YGENLAW-----ADYDFTVDHIVKMWVDEKQFYDYNSNTCAP-NQMCGHYTQVVWR 128
               YGENLAW     A  D      V++W DE Q Y Y+SNTC   N   GHYTQVVW 
Sbjct: 57  PRPGYGENLAWWSSSTALPDTYASAAVQLWYDEFQDYGYSSNTCKDTNGKIGHYTQVVWA 116

Query: 129 KSVRLGCAKERCNNN--HQFIAICNYDP 154
           K+ ++GC    C +    + + +CNYDP
Sbjct: 117 KTYKVGCGVANCPDGTKKKTVVVCNYDP 144

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function. Length = 144

>gnl|CDD|238097 cd00168, SCP, SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

 Score =  116 bits (291), Expect = 4e-34
 Identities = 45/129 (34%), Positives = 63/129 (48%), Gaps = 11/129 (8%)

Query: 29  QQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHS----VSHYGENLA 84
            Q  V LHN  R  V   + M+WD  L   A +YA      CI +HS        GENLA
Sbjct: 1   AQEVVRLHNSYRAKVNGMLPMSWDAELAKTAQNYAN----RCIFKHSGEDGRGFVGENLA 56

Query: 85  WADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNH 144
              YD T    V+ W +E + Y++       +   GHYTQVVW+ + ++GC    C +N 
Sbjct: 57  AGSYDMTGPAAVQAWYNEIKNYNF--GQPGFSSGTGHYTQVVWKNTTKIGCGVAFCGSNS 114

Query: 145 QFIAICNYD 153
            ++ +CNY 
Sbjct: 115 YYV-VCNYG 122

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. Little is known about the biological roles of the bacterial and archaeal SCP domains. Length = 122

>gnl|CDD|240186 cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

 Score =  109 bits (274), Expect = 2e-31
 Identities = 53/135 (39%), Positives = 70/135 (51%), Gaps = 19/135 (14%)

Query: 33  VHLHNEARRNVGIG----IGMTWDKTLEDHAHSYAQKLKVDCIIEHS--VSHY--GENL- 83
           V LHN+ R  V       + MTWD+ L   A +YA+K    CI +H+    H   GENL 
Sbjct: 5   VDLHNQYRSQVSPPAANMLKMTWDEELAALAEAYARK----CIWDHNPDRGHLRVGENLF 60

Query: 84  AWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERC--- 140
                 F     V+ W +EK  Y+YN+NTCAPN+MCGHYTQVVW  + ++GC    C   
Sbjct: 61  ISTGPPFDATKAVEDWNNEKLDYNYNTNTCAPNKMCGHYTQVVWANTFKIGCGSYFCETL 120

Query: 141 NNNHQ---FIAICNY 152
                    + +CNY
Sbjct: 121 EVLRWENATLLVCNY 135

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|240182 cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

 Score =  108 bits (273), Expect = 3e-31
 Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 8/133 (6%)

Query: 29  QQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSV-SHYGENLAWA- 86
           Q+  +  HNE R   G    +  DK L   A  +A+KL     ++HS  S YGENLA+A 
Sbjct: 3   QKECLDAHNEYRALHGAP-PLKLDKELAKEAQKWAEKLASSGKLQHSSPSGYGENLAYAS 61

Query: 87  --DYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNH 144
               D T +  V  W +E + YD+N      +   GH+TQVVW+ S  LG    +     
Sbjct: 62  GSGPDLTGEEAVDSWYNEIKKYDFNKP--GFSSKTGHFTQVVWKSSTELGVGVAKSKKGC 119

Query: 145 QFIAICNYDPPGN 157
            ++ +  Y P GN
Sbjct: 120 VYV-VARYRPAGN 131

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms. Length = 132

>gnl|CDD|240180 cd05380, SCP_euk, SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

 Score =  101 bits (252), Expect = 5e-28
 Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 27/148 (18%)

Query: 29  QQRYVHLHNEARRNVGIGIG-----------MTWDKTLEDHAHSYAQKLKVDCIIEHS-- 75
           +Q  +  HNE R  V  G             + WD  L   A ++A+     C+ EHS  
Sbjct: 1   RQAILDAHNELRSKVAKGTYSLLPPASNMPKLKWDDELAALAQNWAKT----CVFEHSPC 56

Query: 76  --VSHYGENLAW-----ADYDFTVDHIVKMWVDEKQFYDYNSN-TCAPNQMCGHYTQVVW 127
                 G+NLA      +  +   +  V  W +E + Y + SN T   N   GH+TQ+VW
Sbjct: 57  RNTGGVGQNLAAGSSTGSTVEELAEDAVNAWYNELKDYGFGSNPTNNFNSGIGHFTQMVW 116

Query: 128 RKSVRLGCAKERC--NNNHQFIAICNYD 153
            K+ ++GCA  RC  +  ++ + +CNY 
Sbjct: 117 AKTTKVGCAVARCGKDGGNKTVVVCNYS 144

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|240184 cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

 Score = 96.6 bits (241), Expect = 2e-26
 Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 5/125 (4%)

Query: 36  HNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHI 95
           HN  R   G+   +TW+ TL ++A  YA        + HS   YGENLA A Y  +    
Sbjct: 10  HNSKRALHGVQ-PLTWNNTLAEYAQDYANSYDCSGNLAHSGGPYGENLA-AGYP-SGTSA 66

Query: 96  VKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPP 155
           V  W DE + YDY++   +     GH+TQ+VW+ + ++GCA + C     +  +C YDP 
Sbjct: 67  VDAWYDEIEDYDYSNPGFSEAT--GHFTQLVWKSTTQVGCAYKDCGGAWGWYIVCEYDPA 124

Query: 156 GNAAG 160
           GN  G
Sbjct: 125 GNVIG 129

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune. Length = 129

>gnl|CDD|240185 cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

 Score = 97.0 bits (242), Expect = 2e-26
 Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 29/147 (19%)

Query: 31  RYVHLHNEARRNVGIGIG----MTWDKTLEDHAHSYAQKLKVDCIIEHSVS--------- 77
             V +HNE R  V         MTWD  L   A ++A+K    C  +H++          
Sbjct: 5   ECVRIHNELRSKVSPPAANMRYMTWDAALAKTARAWAKK----CKFKHNIYLGKRYKCHP 60

Query: 78  ---HYGENLAWAD--YDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVR 132
                GEN+ W    Y F+  + V  W +E +FYD+++N+C  +++CGHYTQVVW  S +
Sbjct: 61  KFTSVGENI-WLGSIYIFSPKNAVTSWYNEGKFYDFDTNSC--SRVCGHYTQVVWATSYK 117

Query: 133 LGCAKERC----NNNHQFIAICNYDPP 155
           +GCA   C       +  I +CNY P 
Sbjct: 118 VGCAVAFCPNLGGIPNAAIFVCNYAPA 144

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|215778 pfam00188, CAP, Cysteine-rich secretory protein family

 Score = 76.5 bits (188), Expect = 1e-18
 Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 9/125 (7%)

Query: 33  VHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSH-YGENLAWA----D 87
           ++LHNE R   G    ++WD TL   A  +A      C       H YGENLA       
Sbjct: 1   LNLHNELRSAAGGAPPLSWDPTLAAAAQDHAA----YCADNGYFGHDYGENLALVSVAGK 56

Query: 88  YDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFI 147
            D      V+ W DE + YD      A     GH T ++W KS ++GCA  +C +   + 
Sbjct: 57  ADDPGVAAVENWYDEAKDYDAAVGINAWMSSPGHRTNLLWPKSTKVGCAVAKCGDGSSYY 116

Query: 148 AICNY 152
            +CNY
Sbjct: 117 VVCNY 121

This is a large family of cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) that are found in a wide range of organisms, including prokaryotes and non-vertebrate eukaryotes, The nine subfamilies of the mammalian CAP 'super'family include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins. Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP 'super'family results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences. The Ca++-chelating function would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine from Heloderma horridum horridum blocks the Ca++ transporting ryanodine receptors. Length = 121

>gnl|CDD|240183 cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

 Score = 76.2 bits (188), Expect = 2e-18
 Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 17/140 (12%)

Query: 29  QQRYVHLHNEARRNV----GIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHY----- 79
           Q+  V LHNE RR+V       + M W++    +A  +A      C + HS  +      
Sbjct: 3   QKEIVDLHNELRRSVNPTASNMLKMEWNEEAAQNAKKWANT----CNLTHSPPNGRTIGG 58

Query: 80  ---GENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCA 136
              GEN+  + Y  +   +++ W DE + + Y      P  + GHYTQ+VW KS  +GCA
Sbjct: 59  ITCGENIFMSSYPRSWSDVIQAWYDEYKDFKYGVGATPPGAVVGHYTQIVWYKSYLVGCA 118

Query: 137 KERC-NNNHQFIAICNYDPP 155
              C N+ +++  +C+Y P 
Sbjct: 119 VAYCPNSKYKYFYVCHYCPA 138

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. One member, DE or CRISP-1, has been shown to mediate gamete fusion by binding to the egg surface; a sequence motif in the SCP domain plays a role in that binding. Length = 138

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	164
cd05381	136	SCP_PR-1_like SCP_PR-1_like: SCP-like extracellula	100.0
cd05384	129	SCP_PRY1_like SCP_PRY1_like: SCP-like extracellula	100.0
cd05382	132	SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracel	100.0
cd05383	138	SCP_CRISP SCP_CRISP: SCP-like extracellular protei	100.0
smart00198	144	SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extra	100.0
cd05385	144	SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extrac	100.0
cd00168	122	SCP SCP: SCP-like extracellular protein domain, fo	100.0
cd05559	136	SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular prot	100.0
KOG3017	225	consensus Defense-related protein containing SCP d	100.0
cd05380	144	SCP_euk SCP_euk: SCP-like extracellular protein do	99.97
PF00188	124	CAP: Cysteine-rich secretory protein family; Inter	99.87
TIGR02909	127	spore_YkwD uncharacterized protein, YkwD family. M	99.83
cd05379	122	SCP_bacterial SCP_bacterial: SCP-like extracellula	99.68
COG2340	207	Uncharacterized protein with SCP/PR1 domains [Func	99.3
PF11054	254	Surface_antigen: Sporozoite TA4 surface antigen; I	92.55

>cd05381 SCP_PR-1_like SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

Probab=100.00  E-value=1.5e-41  Score=236.73  Aligned_cols=133  Identities=51%  Similarity=1.046  Sum_probs=121.8

Q ss_pred             HHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHHhhhccCccccCCCCccceEEeecCC-CCHHHHHHHHHhccccCcC
Q 048151           30 QRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWADYD-FTVDHIVKMWVDEKQFYDY  108 (164)
Q Consensus        30 ~~il~~hN~~R~~~~~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~~~gen~~~~~~~-~~~~~~v~~W~~e~~~y~~  108 (164)
                      +.||+.||.+|++++++ +|+||++|++.||.+|++|+..|...|+...+|||+++..+. ..++++|+.|++|...|++
T Consensus         2 ~~il~~hN~~R~~~~~~-~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~~~GeNi~~~~~~~~~~~~~v~~W~~e~~~y~~   80 (136)
T cd05381           2 QDFLDAHNAARAAVGVP-PLKWDDTLAAYAQRYANQRRGDCALVHSNGPYGENLFWGSGGNWSAADAVASWVSEKKYYDY   80 (136)
T ss_pred             hHHHHHHHHHHHhcCCC-cceECHHHHHHHHHHHHHhcCCCCcccCCCCCCceEEEecCCCCCHHHHHHHHHhccccCCC
Confidence            68999999999999999 999999999999999998888899988877899999987643 5789999999999999999


Q ss_pred             CCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCC-CCEEEEEEEecCCCCCCCCCCC
Q 048151          109 NSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNN-NHQFIAICNYDPPGNAAGERPF  164 (164)
Q Consensus       109 ~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~-~~~~~~vC~Y~p~gn~~g~~~Y  164 (164)
                      ..+.+..+..++||+||||+++++||||++.|.+ ++.++ ||+|+|+||+.|++||
T Consensus        81 ~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~v-vC~Y~p~gn~~g~~~Y  136 (136)
T cd05381          81 DSNTCAAGKMCGHYTQVVWRNTTRVGCARVTCDNGGGVFI-ICNYDPPGNYIGQRPY  136 (136)
T ss_pred             CCCCcCCCccchHHHHHHHHhcCEeceEEEEeCCCCcEEE-EEEeeCCCCCCCCCCC
Confidence            8887777778999999999999999999999987 45777 9999999999999998

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05384 SCP_PRY1_like SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

Probab=100.00  E-value=1e-37  Score=215.57  Aligned_cols=128  Identities=34%  Similarity=0.672  Sum_probs=112.9

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHHhhhccCccccCCCCccceEEeecCCCCHHHHHHHHHhccccC
Q 048151           27 ATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFY  106 (164)
Q Consensus        27 ~~~~~il~~hN~~R~~~~~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~~~gen~~~~~~~~~~~~~v~~W~~e~~~y  106 (164)
                      ++++.||+.||.+|+.++++ +|+||++|+..||.||++|+..|.+.|++..+|||++...+  .++++|+.|++|.+.|
T Consensus         1 ~~~~~iL~~hN~~R~~~g~~-~L~w~~~La~~A~~~a~~c~~~~~~~~~~~~~geNi~~~~~--~~~~~v~~W~~e~~~y   77 (129)
T cd05384           1 SFASSILDAHNSKRALHGVQ-PLTWNNTLAEYAQDYANSYDCSGNLAHSGGPYGENLAAGYP--SGTSAVDAWYDEIEDY   77 (129)
T ss_pred             CHHHHHHHHHHHHHHHcCCC-cCccCHHHHHHHHHHHHHhccCCceecCCCCCCcEEEEecC--CHHHHHHHHHhhhhhC
Confidence            36899999999999999999 99999999999999999666566688888889999987653  6889999999999999


Q ss_pred             cCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCC-CEEEEEEEecCCCCCCC
Q 048151          107 DYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNN-HQFIAICNYDPPGNAAG  160 (164)
Q Consensus       107 ~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~-~~~~~vC~Y~p~gn~~g  160 (164)
                      +++.+.+  +..++||+||||+++++||||++.|+.+ ..++ ||+|+|+||+.|
T Consensus        78 ~~~~~~~--~~~~~h~tqmvw~~t~~vGCa~~~c~~~~~~~~-vC~Y~p~Gn~~g  129 (129)
T cd05384          78 DYSNPGF--SEATGHFTQLVWKSTTQVGCAYKDCGGAWGWYI-VCEYDPAGNVIG  129 (129)
T ss_pred             CCCCCCC--CCcccchhhhhhhccceeeeEEEEeCCCCeEEE-EEEEECCCCCCc
Confidence            9977543  4569999999999999999999999873 4667 999999999876

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune.

>cd05382 SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

Probab=100.00  E-value=5.4e-37  Score=212.48  Aligned_cols=128  Identities=34%  Similarity=0.596  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHHhhhccCccccCCC-CccceEEeecC---CCCHHHHHHHHHhc
Q 048151           27 ATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS-HYGENLAWADY---DFTVDHIVKMWVDE  102 (164)
Q Consensus        27 ~~~~~il~~hN~~R~~~~~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~-~~gen~~~~~~---~~~~~~~v~~W~~e  102 (164)
                      ++++.||+.||.+|+.++++ +|+||++|+..||.||++|+..+.+.|++. .+|||+++..+   ...++++|+.|++|
T Consensus         1 ~~~~~iL~~hN~~R~~~g~~-~L~wd~~La~~A~~~a~~c~~~~~~~h~~~~~~GeN~~~~~~~~~~~~~~~~v~~W~~e   79 (132)
T cd05382           1 DFQKECLDAHNEYRALHGAP-PLKLDKELAKEAQKWAEKLASSGKLQHSSPSGYGENLAYASGSGPDLTGEEAVDSWYNE   79 (132)
T ss_pred             CHHHHHHHHHHHHHHHcCCC-cCeeCHHHHHHHHHHHHHhhhcCceeCCCCCCCCceeEEecCCCCCCCHHHHHHHHHhc
Confidence            47899999999999999999 999999999999999997776666788776 59999998763   56889999999999


Q ss_pred             cccCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCCCEEEEEEEecCCCCC
Q 048151          103 KQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNA  158 (164)
Q Consensus       103 ~~~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~~~~~~vC~Y~p~gn~  158 (164)
                      ...|++..+..  +..++||+||||+++++||||++.|..+..++ ||+|+|+||+
T Consensus        80 ~~~y~~~~~~~--~~~~gh~tqmvw~~t~~vGCa~~~~~~~~~~~-vC~Y~p~Gn~  132 (132)
T cd05382          80 IKKYDFNKPGF--SSKTGHFTQVVWKSSTELGVGVAKSKKGCVYV-VARYRPAGNV  132 (132)
T ss_pred             cccCCCCCCCC--CCCCCCeEEeEecCCCceeeEEEEcCCCCEEE-EEEEeCCCCC
Confidence            99999875443  45699999999999999999999998776778 9999999995

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms.

>cd05383 SCP_CRISP SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

Probab=100.00  E-value=7.4e-35  Score=203.55  Aligned_cols=122  Identities=35%  Similarity=0.723  Sum_probs=107.5

Q ss_pred             HHHHHHHHHHHHHhhcC-----CCCCccccHHHHHHHHHHHHhhhccCccccCCC--------CccceEEeecCCCCHHH
Q 048151           28 TQQRYVHLHNEARRNVG-----IGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS--------HYGENLAWADYDFTVDH   94 (164)
Q Consensus        28 ~~~~il~~hN~~R~~~~-----~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~--------~~gen~~~~~~~~~~~~   94 (164)
                      .|+.||+.||.+|+.+.     |. +|+||++||..||.||+    +|...|++.        .+|||++..+.....++
T Consensus         2 ~~~~il~~HN~~R~~~~p~a~~M~-~l~Wd~~La~~A~~~a~----~C~~~~~~~~~~~~~~~~~GeNl~~~~~~~~~~~   76 (138)
T cd05383           2 VQKEIVDLHNELRRSVNPTASNML-KMEWNEEAAQNAKKWAN----TCNLTHSPPNGRTIGGITCGENIFMSSYPRSWSD   76 (138)
T ss_pred             HHHHHHHHHHHHhccCCCCcccCc-ccEeCHHHHHHHHHHHh----cCCCcCCchhhcccCCCCcceeeeccCCCCCHHH
Confidence            47899999999999975     34 79999999999999999    999888753        47999998776667899


Q ss_pred             HHHHHHhccccCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCC--CEEEEEEEecCC
Q 048151           95 IVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNN--HQFIAICNYDPP  155 (164)
Q Consensus        95 ~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~--~~~~~vC~Y~p~  155 (164)
                      +|+.||+|...|+++.+.+..+..++||+||||+++++||||++.|.++  +.++ ||+|+|+
T Consensus        77 av~~W~~e~~~y~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~-vC~Y~P~  138 (138)
T cd05383          77 VIQAWYDEYKDFKYGVGATPPGAVVGHYTQIVWYKSYLVGCAVAYCPNSKYKYFY-VCHYCPA  138 (138)
T ss_pred             HHHHHHHHHHhCCCCCCCCCCCCchhhHHHHHHHhccccceEEEECCCCCcCEEE-EEecCCC
Confidence            9999999999999988776667889999999999999999999999875  5677 9999985

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ t

>smart00198 SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

Probab=100.00  E-value=1.3e-34  Score=203.24  Aligned_cols=122  Identities=43%  Similarity=0.815  Sum_probs=108.8

Q ss_pred             HHHHHHHHHHHHHhhcC-----------CCCCccccHHHHHHHHHHHHhhhccCccccCCC-CccceEEeecC-----CC
Q 048151           28 TQQRYVHLHNEARRNVG-----------IGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS-HYGENLAWADY-----DF   90 (164)
Q Consensus        28 ~~~~il~~hN~~R~~~~-----------~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~-~~gen~~~~~~-----~~   90 (164)
                      .|+.||+.||.+|++++           |+ +|+||++||..||.+|+    +|...|+.. .+|||+++.++     ..
T Consensus         2 ~~~~iL~~HN~~R~~~a~G~~~~p~a~~m~-~l~Wd~~La~~A~~~a~----~C~~~~~~~~~~GeNi~~~~~~~~~~~~   76 (144)
T smart00198        2 QQQEILDAHNKLRSQVAKGLLANPAASNML-KLTWDCELASSAQNWAN----QCPFGHSTPRGYGENLAWWSSSTDLPIT   76 (144)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCcccccc-cccCCHHHHHHHHHHHH----hCCCcCCCcCCcCcceEEecccCcccch
Confidence            57899999999999999           99 99999999999999999    999888765 78999987653     34


Q ss_pred             CHHHHHHHHHhccccCcCCCCCCCC-CCcchHHHHHHHHcCCeeeEEEEEeCCCC---EEEEEEEecCC
Q 048151           91 TVDHIVKMWVDEKQFYDYNSNTCAP-NQMCGHYTQVVWRKSVRLGCAKERCNNNH---QFIAICNYDPP  155 (164)
Q Consensus        91 ~~~~~v~~W~~e~~~y~~~~~~~~~-~~~~~~f~qmvw~~~~~vGCa~~~c~~~~---~~~~vC~Y~p~  155 (164)
                      .++++|+.|++|...|++..+.+.. +..++||+||||+++++||||++.|.++.   .++ ||+|+|+
T Consensus        77 ~~~~av~~W~~e~~~y~~~~~~~~~~~~~~~hftqmvw~~s~~vGCa~~~c~~~~~~~~~~-vC~Y~P~  144 (144)
T smart00198       77 YASAAVQLWYDEFQDYGYSSNTCKDTNGKIGHYTQVVWAKTYKVGCGVSNCPDGTKKKTVV-VCNYDPP  144 (144)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCccccCccchhHHHHHHHHhcCCcceEEEECCCCCcceEEE-EEecCCC
Confidence            7889999999999999998877665 67799999999999999999999998764   577 9999985

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function.

>cd05385 SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

Probab=100.00  E-value=2.6e-34  Score=202.09  Aligned_cols=121  Identities=39%  Similarity=0.836  Sum_probs=104.6

Q ss_pred             HHHHHHHHHHHHHHhhcC-----CCCCccccHHHHHHHHHHHHhhhccCccccCCC------------CccceEEeec-C
Q 048151           27 ATQQRYVHLHNEARRNVG-----IGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS------------HYGENLAWAD-Y   88 (164)
Q Consensus        27 ~~~~~il~~hN~~R~~~~-----~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~------------~~gen~~~~~-~   88 (164)
                      +++++||+.||.+|+++.     |+ +|+||++|+..||.||+    +|.+.|++.            .+|||+++.. +
T Consensus         1 ~f~~~~L~~HN~~R~~~~p~a~~m~-~l~Wd~~La~~Aq~~a~----~C~~~~~~~~~~~~~~~~~~~~~GeNi~~~~~~   75 (144)
T cd05385           1 EFIDECVRIHNELRSKVSPPAANMR-YMTWDAALAKTARAWAK----KCKFKHNIYLGKRYKCHPKFTSVGENIWLGSIY   75 (144)
T ss_pred             CHHHHHHHHHHHHHhhCCCCcccCc-ccccCHHHHHHHHHHHh----cCCCCCCchhhcccccccccCcccceeeecccC
Confidence            468899999999999994     67 99999999999999999    998877542            4899998765 3


Q ss_pred             CCCHHHHHHHHHhccccCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCCC-----EEEEEEEecCC
Q 048151           89 DFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNH-----QFIAICNYDPP  155 (164)
Q Consensus        89 ~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~~-----~~~~vC~Y~p~  155 (164)
                      .+.++++|+.||+|...|+++.+.+.  ..++||+||||+++++||||++.|.++.     .++ ||+|+|+
T Consensus        76 ~~~~~~av~~W~~e~~~y~~~~~~~~--~~~ghftqmvw~~t~~vGCa~~~c~~~~~~~~~~~v-VC~Y~p~  144 (144)
T cd05385          76 IFSPKNAVTSWYNEGKFYDFDTNSCS--RVCGHYTQVVWATSYKVGCAVAFCPNLGGIPNAAIF-VCNYAPA  144 (144)
T ss_pred             CCCHHHHHHHHHHHHHhCCCCCCCCC--CcccCHHHHHHhhccccceEEEECCCCCCccccEEE-EEeCCCC
Confidence            45889999999999999999876654  4699999999999999999999998752     567 9999984

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd00168 SCP SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

Probab=100.00  E-value=5.4e-33  Score=190.08  Aligned_cols=116  Identities=40%  Similarity=0.774  Sum_probs=104.4

Q ss_pred             HHHHHHHHHHHhhc-CCCCCccccHHHHHHHHHHHHhhhccCccccCCC----CccceEEeecCCCCHHHHHHHHHhccc
Q 048151           30 QRYVHLHNEARRNV-GIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS----HYGENLAWADYDFTVDHIVKMWVDEKQ  104 (164)
Q Consensus        30 ~~il~~hN~~R~~~-~~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~----~~gen~~~~~~~~~~~~~v~~W~~e~~  104 (164)
                      ++||+.||.+|+++ +++ +|+||++|+..||.+|+    +|.+.|++.    .+|||+++......++++++.|++|..
T Consensus         2 ~~il~~hN~~R~~~a~~~-~L~wd~~La~~A~~~a~----~c~~~h~~~~~~~~~geNi~~~~~~~~~~~~v~~W~~e~~   76 (122)
T cd00168           2 QEVVRLHNSYRAKVNGML-PMSWDAELAKTAQNYAN----RCIFKHSGEDGRGFVGENLAAGSYDMTGPAAVQAWYNEIK   76 (122)
T ss_pred             cHHHHHHHHHHHhcCCCC-CCccCHHHHHHHHHHHh----hccccCCCcccCCCCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            67999999999999 999 99999999999999999    999888765    589999988755689999999999999


Q ss_pred             cCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCCCEEEEEEEec
Q 048151          105 FYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYD  153 (164)
Q Consensus       105 ~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~~~~~~vC~Y~  153 (164)
                      .|++.+..  .+..++||+||||+++++||||++.|+++..++ ||+|+
T Consensus        77 ~y~~~~~~--~~~~~~h~~qmvw~~s~~vGca~~~~~~~~~~~-vC~Y~  122 (122)
T cd00168          77 NYNFGQPG--FSSGTGHYTQVVWKNTTKIGCGVAFCGSNSYYV-VCNYG  122 (122)
T ss_pred             hCCCCCCC--CCCCccchhhhhcccCCeeeeEEEEcCCCCEEE-EEeCc
Confidence            99998543  345699999999999999999999998777888 99995

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as

>cd05559 SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

Probab=100.00  E-value=6.6e-33  Score=193.23  Aligned_cols=119  Identities=43%  Similarity=0.846  Sum_probs=104.3

Q ss_pred             HHHHHHHHHHHHhhcC-----CCCCccccHHHHHHHHHHHHhhhccCccccCCC----CccceEEeecC-CCCHHHHHHH
Q 048151           29 QQRYVHLHNEARRNVG-----IGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS----HYGENLAWADY-DFTVDHIVKM   98 (164)
Q Consensus        29 ~~~il~~hN~~R~~~~-----~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~----~~gen~~~~~~-~~~~~~~v~~   98 (164)
                      |+.||+.||.+|+.++     |. +|+||++||..||.||+    +|.+.|++.    .+|||++...+ ...+.++|+.
T Consensus         1 r~~il~~HN~~R~~~~p~a~~m~-~L~Wd~~La~~A~~~a~----~C~~~~~~~~~~~~~GeNl~~~~~~~~~~~~~v~~   75 (136)
T cd05559           1 RLNLVDLHNQYRSQVSPPAANML-KMTWDEELAALAEAYAR----KCIWDHNPDRGHLRVGENLFISTGPPFDATKAVED   75 (136)
T ss_pred             CcHHHHHHHHHHhhCCCccccCc-ccccCHHHHHHHHHHHH----hccccCCCcccCCCceeeeeecCCCCCCHHHHHHH
Confidence            5789999999999986     44 79999999999999999    999888664    58999987764 4678999999


Q ss_pred             HHhccccCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCC-------CEEEEEEEec
Q 048151           99 WVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNN-------HQFIAICNYD  153 (164)
Q Consensus        99 W~~e~~~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~-------~~~~~vC~Y~  153 (164)
                      |++|...|+++.+.+..+..++||+||||+++++||||++.|.++       ..++ ||+|+
T Consensus        76 W~~e~~~y~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~~~~~~-vC~Y~  136 (136)
T cd05559          76 WNNEKLDYNYNTNTCAPNKMCGHYTQVVWANTFKIGCGSYFCETLEVLRWENATLL-VCNYG  136 (136)
T ss_pred             HHHHHHhcCCCCCCCCCCCcccchHHHHHhccCccceEEEECCCCCCCCcccCEEE-EecCC
Confidence            999999999998887777889999999999999999999999652       2456 99995

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>KOG3017 consensus Defense-related protein containing SCP domain [Function unknown]

Probab=100.00  E-value=4.5e-33  Score=208.98  Aligned_cols=132  Identities=41%  Similarity=0.780  Sum_probs=116.3

Q ss_pred             HHHHHHHHHHHHHHhhcC-----CCCCccccHHHHHHHHHHHHhhhccCccccCC------CCccceEEeecCC------
Q 048151           27 ATQQRYVHLHNEARRNVG-----IGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSV------SHYGENLAWADYD------   89 (164)
Q Consensus        27 ~~~~~il~~hN~~R~~~~-----~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~------~~~gen~~~~~~~------   89 (164)
                      +.+++|++.||.+|..+.     |+ +|+||++||..||.||+    +|.+.|+.      ..+|||+++.++.      
T Consensus        40 ~~~~~~~~~hn~~r~~~~~~as~m~-~m~Wd~~La~~Aq~~a~----~c~~~~~~~~~~~~~~~GeNl~~~~~~~~~~~~  114 (225)
T KOG3017|consen   40 NLRSEILNGHNVARGAVGPPASNMM-KLKWDDELAALAQNWAN----TCPFGHDKCVHTSFGPYGENLAWGWSSNPPLSL  114 (225)
T ss_pred             HHHHHHHhhhHHhcCccCCchHhCc-cccCCHHHHHHHHHHHh----hCCcccCccccccCCCCcccceeeccCCCCccc
Confidence            788999999999999999     99 99999999999999999    88887763      4679999987753      


Q ss_pred             -CCHHHHHHHHHhccccCcCCCCCCCC---CCcchHHHHHHHHcCCeeeEEEEEeCCC-----CEEEEEEEecCCCCCCC
Q 048151           90 -FTVDHIVKMWVDEKQFYDYNSNTCAP---NQMCGHYTQVVWRKSVRLGCAKERCNNN-----HQFIAICNYDPPGNAAG  160 (164)
Q Consensus        90 -~~~~~~v~~W~~e~~~y~~~~~~~~~---~~~~~~f~qmvw~~~~~vGCa~~~c~~~-----~~~~~vC~Y~p~gn~~g  160 (164)
                       .....+++.|+.|...|++.++.+..   +..++|||||||+++++||||++.|+++     ..++ ||+|+|+||+.+
T Consensus       115 ~~~~~~a~~~w~~e~~~~~~~~~~~~~~~~~~~~gHyTQ~vw~~s~~vGCgv~~c~~~~~~~~~~~~-vC~Y~p~g~~~~  193 (225)
T KOG3017|consen  115 DTSGALAVEAWESEFQEYDWSSNTCSSADFGEGIGHYTQMVWAKSTKVGCGVVRCGNGSNGYNTVAV-VCNYDPPGNNIN  193 (225)
T ss_pred             cccHHHHHHHHHHHHHHccCcccccCcccCCCcceEEEEEEEeCCceeceeeccCCCCCCCcceEEE-EEEeecCCCCcC
Confidence             46778999999999999999988875   7889999999999999999999999887     4567 999999955544


Q ss_pred             -CCCC
Q 048151          161 -ERPF  164 (164)
Q Consensus       161 -~~~Y  164 (164)
                       +.||
T Consensus       194 ~~~~y  198 (225)
T KOG3017|consen  194 GEIPY  198 (225)
T ss_pred             CCCcC
Confidence             6766

>cd05380 SCP_euk SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

Probab=99.97  E-value=1.8e-31  Score=186.75  Aligned_cols=119  Identities=36%  Similarity=0.700  Sum_probs=103.3

Q ss_pred             HHHHHHHHHHHHhhc------------CCCCCccccHHHHHHHHHHHHhhhccCccccCCC----CccceEEeecCC---
Q 048151           29 QQRYVHLHNEARRNV------------GIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS----HYGENLAWADYD---   89 (164)
Q Consensus        29 ~~~il~~hN~~R~~~------------~~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~----~~gen~~~~~~~---   89 (164)
                      |+.||+.||.+|+++            .|+ +|+||++||..|+.+|+    +|...|+..    .+|||++.....   
T Consensus         1 ~~~il~~HN~~R~~~a~g~~~~~p~a~~m~-~l~Wd~~La~~A~~~a~----~C~~~~~~~~~~~~~GeNl~~~~~~~~~   75 (144)
T cd05380           1 RQAILDAHNELRSKVAKGTYSLLPPASNMP-KLKWDDELAALAQNWAK----TCVFEHSPCRNTGGVGQNLAAGSSTGST   75 (144)
T ss_pred             CcHHHHHHHHHHHHhhcCCCCCCCchhcCC-cceeCHHHHHHHHHHHh----cCCCcCCcccCCCCCCcEEEEeccCCCC
Confidence            468999999999999            678 99999999999999999    998888765    689999987642   


Q ss_pred             --CCHHHHHHHHHhccccCcCCCC-CCCCCCcchHHHHHHHHcCCeeeEEEEEeCC---CCEEEEEEEec
Q 048151           90 --FTVDHIVKMWVDEKQFYDYNSN-TCAPNQMCGHYTQVVWRKSVRLGCAKERCNN---NHQFIAICNYD  153 (164)
Q Consensus        90 --~~~~~~v~~W~~e~~~y~~~~~-~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~---~~~~~~vC~Y~  153 (164)
                        ..++++|+.|++|...|++... .+..+..++||+||||+++++||||++.|..   ...++ ||+|+
T Consensus        76 ~~~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~~~~~~~~~~~~-vC~Y~  144 (144)
T cd05380          76 VEELAEDAVNAWYNELKDYGFGSNPTNNFNSGIGHFTQMVWAKTTKVGCAVARCGKDGGNKTVV-VCNYS  144 (144)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCcCcccccccchhHHHHHHHHhcCccceEEEEeecCCceEEEE-EecCC
Confidence              3688999999999999999875 4445677999999999999999999999975   35667 99996

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>PF00188 CAP: Cysteine-rich secretory protein family; InterPro: IPR014044 The cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) superfamily proteins are found in a wide range of organisms, including prokaryotes [] and non-vertebrate eukaryotes [], The nine subfamilies of the mammalian CAP superfamily include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins

Probab=99.87  E-value=2.5e-21  Score=129.67  Aligned_cols=114  Identities=30%  Similarity=0.568  Sum_probs=83.0

Q ss_pred             HHHHHHHH-hhcCCCCCccccHHHHHHHHHHHHhhhccCccccCCC-CccceEEeecCCCCHHHH----HHHHHhccccC
Q 048151           33 VHLHNEAR-RNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS-HYGENLAWADYDFTVDHI----VKMWVDEKQFY  106 (164)
Q Consensus        33 l~~hN~~R-~~~~~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~-~~gen~~~~~~~~~~~~~----v~~W~~e~~~y  106 (164)
                      |+.||++| ...+++ +|+||++|+..|+.+|+    .|...+... ..|++.............    ++.|+.+...+
T Consensus         1 L~~~N~~R~~~~~~~-~L~~d~~L~~~A~~~a~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (124)
T PF00188_consen    1 LDLHNEYRSAANGLP-PLKWDPELAKAAQAHAK----YCANSNSLSHDSGENGSQSSRFGSYSDAQVTAVENWYSESKNY   75 (124)
T ss_dssp             HHHHHHHHHBSSTBB---EE-HHHHHHHHHHHT----TTCSSEETTEESEEEEEEESSTTSHHHHHHHHHHHHHGGGGGE
T ss_pred             CHHHHHHHHHhCCCC-CCeeCHHHHHHHHHhhH----HhhhhcccccccCCCCccccccccccchhhHHHHHHHhccccc
Confidence            78999999 888899 99999999999999999    776633222 467777766532222222    89999999988


Q ss_pred             cCCC--CCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCCC--EEEEEEEe
Q 048151          107 DYNS--NTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNH--QFIAICNY  152 (164)
Q Consensus       107 ~~~~--~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~~--~~~~vC~Y  152 (164)
                      +...  ........++||++|+|+++++||||++.|..+.  .++ ||.|
T Consensus        76 ~~~~~~~~~~~~~~~~h~~~ll~~~~~~iGca~~~~~~~~~~~~~-vc~y  124 (124)
T PF00188_consen   76 NFQNQSIFNSWMNSPGHFTNLLWPNTTRIGCAVANCPNGKNNYYW-VCNY  124 (124)
T ss_dssp             ETTCSTEESSTTSTCHHHHHHT-TT--EEEEEEEEETTSSSEEEE-EEEE
T ss_pred             ccccchhhhccCCchhhhhhhhcCCCCEEEEEEEEeCCCCeeEEE-EEEC
Confidence            8762  1222246689999999999999999999998875  777 9998

Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP superfamily results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences []. The Ca++-chelating function [] would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how Q91055 from SWISSPROT blocks the Ca++ transporting ryanodine receptors. This entry represents the CAP domain common to all members of the CAP superfamily. The CAP domain forms a unique 3 layer alpha-beta-alpha fold with some, though not all, of the structural elements found in proteases [].; PDB: 3U3N_C 3U3U_C 3U3L_C 1U53_A 1RC9_A 1SMB_A 3NT8_B 1QNX_A 1WVR_A 3Q2U_A ....

>TIGR02909 spore_YkwD uncharacterized protein, YkwD family

Probab=99.83  E-value=1.5e-19  Score=124.45  Aligned_cols=106  Identities=20%  Similarity=0.336  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHHhhhccCccccCCC-----------------CccceEEeecCC
Q 048151           27 ATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS-----------------HYGENLAWADYD   89 (164)
Q Consensus        27 ~~~~~il~~hN~~R~~~~~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~-----------------~~gen~~~~~~~   89 (164)
                      +.++++++.||.+|.+++++ +|+||+.|++.|+.||++|+..+.+.|...                 .+|||++.+.  
T Consensus         3 ~~e~~~l~~iN~~R~~~Gl~-pL~~~~~L~~~A~~hA~~ma~~~~~~H~~~~~~~~~~r~~~~g~~~~~~gENi~~g~--   79 (127)
T TIGR02909         3 AEEKRVVELVNAERAKNGLK-PLKADPELSKVARLKSEDMRDKNYFSHTSPTYGSPFDMMKKFGISYRMAGENIAYGN--   79 (127)
T ss_pred             HHHHHHHHHHHHHHHHcCCC-CCccCHHHHHHHHHHHHHHHhCCcccccCCCCCCHHHHHHHcCCCcccceeeeeccC--
Confidence            56889999999999999999 999999999999999999998888888642                 3589998654  


Q ss_pred             CCHHHHHHHHHhccccCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCCCEEEEEEEe
Q 048151           90 FTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNY  152 (164)
Q Consensus        90 ~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~~~~~~vC~Y  152 (164)
                      ..++.+++.|+++                .+|+++|+|++.+++|||++.+++++.|+ |=.|
T Consensus        80 ~~~~~~v~~W~~S----------------~gH~~nil~~~~~~~Gvg~~~~~~g~~y~-~q~F  125 (127)
T TIGR02909        80 STVEAVHNAWMNS----------------PGHRANILNPNYTEIGVGYVEGGSGGIYW-TQMF  125 (127)
T ss_pred             CCHHHHHHHHHcC----------------HhHHHHHcCCCcCeEeEEEEeCCCCCeEE-EEEe
Confidence            3678999999865                68999999999999999999988876766 5444

Members of this protein family represent a subset of those belonging to Pfam family pfam00188 (SCP-like extracellular protein). Based on currently cuttoffs for this model, all member proteins are found in Bacteria capable of endospore formation. Members include a named but uncharacterized protein, YkwD of Bacillus subtilis. Only the C-terminal region is well-conserved and is included in the seed alignment for this model. Three members of this family have an N-terminal domain homologous to the spore coat assembly protein SafA.

>cd05379 SCP_bacterial SCP_bacterial: SCP-like extracellular protein domain, as found in bacteria and archaea

Probab=99.68  E-value=6.9e-16  Score=104.55  Aligned_cols=103  Identities=21%  Similarity=0.373  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHHhhhccCccccCCC-----------------CccceEEeecCCCCH
Q 048151           30 QRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS-----------------HYGENLAWADYDFTV   92 (164)
Q Consensus        30 ~~il~~hN~~R~~~~~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~-----------------~~gen~~~~~~~~~~   92 (164)
                      +.+++.+|.+|..++++ +|+||.+|+..|+.+|.+|+....+.|.+.                 ..|||++....  .+
T Consensus         2 ~~~~~~iN~~R~~~gl~-pl~~~~~l~~~A~~~a~~~~~~~~~~h~~~~~~~~~~~~~~~g~~~~~~~eni~~~~~--~~   78 (122)
T cd05379           2 QEALELINAYRAQNGLP-PLTWDPALAAAAQAHARDMAANGYFSHTGPDGSSPFDRARAAGYPYSSAGENIAYGYS--TA   78 (122)
T ss_pred             hHHHHHHHHHHHHcCCC-CCccChHHHHHHHHHHHHHHhcCccCCcCCCCCCHHHHHHHcCCCcCccchhhcccCC--CH
Confidence            57899999999999999 999999999999999999987666666432                 13889876643  68


Q ss_pred             HHHHHHHHhccccCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCCCEEEEEEEe
Q 048151           93 DHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNY  152 (164)
Q Consensus        93 ~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~~~~~~vC~Y  152 (164)
                      .++++.|+++                .+|+.+|+++..+++|||+....++..++ |..|
T Consensus        79 ~~~~~~w~~~----------------~~H~~~ll~~~~~~~Gvg~~~~~~~~~y~-~~~f  121 (122)
T cd05379          79 EAAVDGWMNS----------------PGHRANILNPDYTEVGVGVAYGGDGGYYW-VQVF  121 (122)
T ss_pred             HHHHHHHhCC----------------HhHHHHHcCCCcceeeEEEEeCCCCCeEE-EEec
Confidence            9999999865                78999999999999999999987776666 6554

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Little is known about the biological roles of the bacterial and archaeal SCP domains.

>COG2340 Uncharacterized protein with SCP/PR1 domains [Function unknown]

Probab=99.30  E-value=1.5e-11  Score=91.28  Aligned_cols=98  Identities=20%  Similarity=0.345  Sum_probs=84.4

Q ss_pred             hHHHHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHHhhhccCccccCCC-----------------CccceEEeecC
Q 048151           26 NATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS-----------------HYGENLAWADY   88 (164)
Q Consensus        26 ~~~~~~il~~hN~~R~~~~~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~-----------------~~gen~~~~~~   88 (164)
                      +++.+++++.+|.+|..++++ +|.||.+|+..|+.++.+|++...+.|..+                 .+||||+.++.
T Consensus        78 ~~~~~~~~~~~N~~R~~~~l~-~L~~n~~L~~~A~~~a~~m~~~g~~sH~~~~g~~~~~r~~~~g~~~~~agENIa~g~~  156 (207)
T COG2340          78 AQFEKAVVAETNQERAKHGLP-PLAWNATLAKAARNHARDMAKNGYFSHTSPTGETPADRLKKYGISGATAGENIAYGSN  156 (207)
T ss_pred             chhHHHHHHHHHHHHhhcCCC-CcccCHHHHHHHHHHHHHHHHcCCccccCCCCCCHHHHHHhCCcccccccceeecCCC
Confidence            467889999999999999999 999999999999999999998888888542                 48999988753


Q ss_pred             CCCHHHHHHHHHhccccCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeC
Q 048151           89 DFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCN  141 (164)
Q Consensus        89 ~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~  141 (164)
                      +. .+.+++.|.+.                .||-.+|+.+..+.+|.|+..-.
T Consensus       157 ~~-~~~~v~~Wl~S----------------~gH~~nll~~~~~~~Gv~~~~~~  192 (207)
T COG2340         157 DP-PEAAVDGWLNS----------------PGHRKNLLNPAYTEIGVGVAYDA  192 (207)
T ss_pred             Cc-hHHHHHHhcCC----------------hhhhhhccCcchhheeEEEEecC
Confidence            21 27999999765                58999999999999999998743

>PF11054 Surface_antigen: Sporozoite TA4 surface antigen; InterPro: IPR021288 This family of proteins is a Eukaryotic family of surface antigens

Probab=92.55  E-value=1.2  Score=33.85  Aligned_cols=129  Identities=16%  Similarity=0.217  Sum_probs=78.3

Q ss_pred             HHHHHHHHHHHHhhcCCC-----------CCccccHHHHHHHHHHHHhhhccCccccCCC-------------CccceEE
Q 048151           29 QQRYVHLHNEARRNVGIG-----------IGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS-------------HYGENLA   84 (164)
Q Consensus        29 ~~~il~~hN~~R~~~~~~-----------~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~-------------~~gen~~   84 (164)
                      .-++|+..|..|...|++           ++=-=+++| .....|-.    -|...-+..             .-| ..+
T Consensus        35 ~~~CL~E~NaaReAAGL~~F~~A~~~~~~Lp~~~~~e~-~~~t~W~~----iC~~l~pt~~~~~~~~~~~~pf~~G-TyA  108 (254)
T PF11054_consen   35 SVECLSEMNAAREAAGLANFTEATSDDQKLPEPGSEEL-TDDTLWKK----ICEHLIPTQAEPAAEASKLNPFKDG-TYA  108 (254)
T ss_pred             chhHHHHHHHHHHhcCchhhHhhcCCcccCCCCCchhc-cchhhHHH----HHHHhcCCCCcchhhccccCcCCCC-ceE
Confidence            567999999999999966           111113334 44455665    665332211             112 222


Q ss_pred             eec---CCCCHHHHHHHHHhccccCcCCCCC------CCCCCcchHHHHHHHHcCCe-eeEEEEEeCCC-----------
Q 048151           85 WAD---YDFTVDHIVKMWVDEKQFYDYNSNT------CAPNQMCGHYTQVVWRKSVR-LGCAKERCNNN-----------  143 (164)
Q Consensus        85 ~~~---~~~~~~~~v~~W~~e~~~y~~~~~~------~~~~~~~~~f~qmvw~~~~~-vGCa~~~c~~~-----------  143 (164)
                      ..+   +..+..+.|+.|-.-.++++--.+.      .+.+...-.|.-|.+++... .-|.+..|...           
T Consensus       109 f~~lt~~~~dCk~aVdYWKaafknF~glPPs~~~~~~lYndqdnVSFVALYNPs~~atAdC~vvTCt~tt~~~~~~~~~~  188 (254)
T PF11054_consen  109 FKSLTDEKPDCKEAVDYWKAAFKNFTGLPPSKTAANKLYNDQDNVSFVALYNPSSSATADCRVVTCTQTTSNTAGGSRLQ  188 (254)
T ss_pred             eeeccCCCCChHHHHHHHHHHHhhcCCCCCChhhccccccCCcceeEEEEeCCCCCCcceeEEEeCCCCCccCCCccccc
Confidence            222   4568999999998887777642222      12233344566677777754 67999999541           


Q ss_pred             ---------CEEEEEEEecCCCC-CCCCCCC
Q 048151          144 ---------HQFIAICNYDPPGN-AAGERPF  164 (164)
Q Consensus       144 ---------~~~~~vC~Y~p~gn-~~g~~~Y  164 (164)
                               ++-+ +|.-.|..= ..|+.||
T Consensus       189 ~d~~~~~~~gyAl-iCkT~P~Al~~~~saPF  218 (254)
T PF11054_consen  189 GDSDSESKTGYAL-ICKTMPAALASDGSAPF  218 (254)
T ss_pred             CCCcccccceEEE-EEecCchhhcCCCCCCC
Confidence                     3455 899999764 5666664

One of the better characterised members of the family is the sporulated TA4 antigen. The TA4 gene encodes a single polypeptide of 25 kDa which contains a 17 and a 8kDa polypeptide [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	164
1cfe_A	135	P14a, Nmr, 20 Structures Length = 135		3e-31
1rc9_A	221	Crystal Structure Of Stecrisp, A Member Of Crisp Fa		1e-13
3q2r_A	205	Crystal Structure Of Sglipr1 Soaked With Zinc Chlor		4e-13
2dda_A	211	Crystal Structure Of Pseudechetoxin From Pseudechis		5e-13
2ddb_A	210	Crystal Structure Of Pseudecin From Pseudechis Porp		1e-12
1smb_A	154	Crystal Structure Of Golgi-Associated Pr-1 Protein		2e-12
4aiw_A	154	Gapr-1 With Bound Inositol Hexakisphosphate Length		5e-12
1xta_A	221	Crystal Structure Of Natrin, A Snake Venom Crisp Fr		5e-11
1wvr_A	221	Crystal Structure Of A Crisp Family Ca-Channel Bloc		6e-11
1xx5_A	221	Crystal Structure Of Natrin From Naja Atra Snake Ve		9e-11
1u53_A	196	Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein F		4e-08
2vzn_A	218	Crystal Structure Of The Major Allergen From Fire A		4e-08
3nt8_A	424	Crystal Structure Of Na-Asp-1 Length = 424		2e-06
1qnx_A	209	Ves V 5, An Allergen From Vespula Vulgaris Venom Le		2e-05

>pdb|1CFE|A Chain A, P14a, Nmr, 20 Structures Length = 135

Iteration: 1
 Score =  130 bits (328), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/136 (49%), Positives = 85/136 (62%), Gaps = 4/136 (2%)
Query: 28  TQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWAD 87
           + Q Y+ +HN+AR  VG+G  M+WD  L   A +YA     DC + HS +  GENLA   
Sbjct: 3   SPQDYLAVHNDARAQVGVGP-MSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAKGG 59
Query: 88  YDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFI 147
            DFT    V++WV E+  Y+Y +N C   + C HYTQVVWR SVRLGC + RCNN   FI
Sbjct: 60  GDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFI 119
Query: 148 AICNYDPPGNAAGERP 163
           + CNYDP GN  G+RP
Sbjct: 120 S-CNYDPVGNWIGQRP 134

>pdb|1RC9|A Chain A, Crystal Structure Of Stecrisp, A Member Of Crisp Family From Trimeresurus Stejnegeri Refined At 1.6 Angstroms Resolution: Structual Relationship Of The Two Domains Length = 221

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 29  QQRYVHLHNEARRNVGIG----IGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHY----- 79
           Q   V LHN  RR+V       + M W     D+A  +A +    CI  HS         
Sbjct: 15  QNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAYR----CIESHSSYESRVIEG 70
Query: 80  ---GENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCA 136
              GEN+  + Y      I+  W DE + + Y      PN + GHYTQ+VW KS R+GCA
Sbjct: 71  IKCGENIYMSPYPMKWTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYRIGCA 130
Query: 137 KERC-NNNHQFIAICNYDPPGNAAGE 161
              C ++ + +  +C Y P GN  G+
Sbjct: 131 AAYCPSSPYSYFFVCQYCPAGNFIGK 156

>pdb|3Q2R|A Chain A, Crystal Structure Of Sglipr1 Soaked With Zinc Chloride Length = 205

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 68/145 (46%), Gaps = 22/145 (15%)
Query: 33  VHLHNEARRNVGIG----IGMTWDKTLEDHAHSYAQ--------KLKVDCIIEHSVSHYG 80
           V +HN+ R  V       + MTWD  L   A ++A         +LK    +  + +  G
Sbjct: 23  VRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWASNCQFSHNTRLKPPHKLHPNFTSLG 82
Query: 81  ENLAWADYD-FTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKER 139
           EN+       F+V   +  W DE Q YD+ +  C   ++CGHYTQVVW  S ++GCA + 
Sbjct: 83  ENIWTGSVPIFSVSSAITNWYDEIQDYDFKTRIC--KKVCGHYTQVVWADSYKVGCAVQF 140
Query: 140 CNNNHQFIA-------ICNYDPPGN 157
           C     F A       ICNY P GN
Sbjct: 141 CPKVSGFDALSNGAHFICNYGPGGN 165

>pdb|2DDA|A Chain A, Crystal Structure Of Pseudechetoxin From Pseudechis Australis Length = 211

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 17/145 (11%)
Query: 29  QQRYVHLHNEARRNVGIG----IGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHY----- 79
           Q+  V  HN  RR+V       + M W+     +A  +A +    C   HS  +      
Sbjct: 7   QKEIVDKHNALRRSVKPTARNMLQMKWNSRAAQNAKRWANR----CTFAHSPPNKRTVGK 62
Query: 80  ---GENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCA 136
              GEN+  +   F    +V+ W DE + + Y      P  + GHYTQVVW KS  +GCA
Sbjct: 63  LRCGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSYLIGCA 122
Query: 137 KERCNNNHQFIAICNYDPPGNAAGE 161
             +C+++ +++ +C Y P GN  G 
Sbjct: 123 SAKCSSS-KYLYVCQYCPAGNIRGS 146

>pdb|2DDB|A Chain A, Crystal Structure Of Pseudecin From Pseudechis Porphyriacus Length = 210

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 29  QQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHY--------G 80
           Q+  V  HN  RR+V              HA   A++    C   HS  +         G
Sbjct: 6   QKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWADRCTFAHSPPNTRTVGKLRCG 65
Query: 81  ENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERC 140
           EN+  +   F    +V+ W DE + + Y      P  + GHYTQVVW KS  +GCA  +C
Sbjct: 66  ENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCASAKC 125
Query: 141 NNNHQFIAICNYDPPGNAAGE 161
           +++ +++ +C Y P GN  G 
Sbjct: 126 SSS-KYLYVCQYCPAGNIRGS 145

>pdb|1SMB|A Chain A, Crystal Structure Of Golgi-Associated Pr-1 Protein Length = 154

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 23  SANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSV----SH 78
           SA+       +  HNE R+  G+   +   K L   A  Y++ L    I++HS       
Sbjct: 4   SASKQFHNEVLKAHNEYRQKHGVPP-LKLXKNLNREAQQYSEALASTRILKHSPESSRGQ 62
Query: 79  YGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKE 138
            GENLAWA YD T   +   W  E    +YN          GH+T +VW+ + ++G  K 
Sbjct: 63  XGENLAWASYDQTGKEVADRWYSE--IKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKA 120
Query: 139 RCNNNHQFIAICNYDPPGNAAGERPF 164
             ++   F+ +  Y P GN   E  F
Sbjct: 121 SASDGSSFV-VARYFPAGNVVNEGFF 145

>pdb|4AIW|A Chain A, Gapr-1 With Bound Inositol Hexakisphosphate Length = 154

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 23  SANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHY--- 79
           SA+       +  HNE R+  G+   +   K L   A  Y++ L    I++HS       
Sbjct: 4   SASKQFHNEVLKAHNEYRQKHGVPP-LKLXKNLNREAQQYSEALASTRILKHSPESSRGQ 62
Query: 80  -GENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKE 138
            GENLAWA YD T   +   W  E    +YN          GH+T +VW+ + ++G  K 
Sbjct: 63  CGENLAWASYDQTGKEVADRWYSE--IKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKA 120
Query: 139 RCNNNHQFIAICNYDPPGNAAGERPF 164
             ++   F+ +  Y P GN   E  F
Sbjct: 121 SASDGSSFV-VARYFPAGNVVNEGFF 145

>pdb|1XTA|A Chain A, Crystal Structure Of Natrin, A Snake Venom Crisp From Taiwan Cobra (Naja Atra) Length = 221

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 9/149 (6%)
Query: 22  SSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHY-- 79
           S+     Q+  V LHN  RR V               A S A++    C + HS  +   
Sbjct: 8   STRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANTCSLNHSPDNLRV 67
Query: 80  ------GENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRL 133
                 GE++  +    T   I+ +W DE + + Y      P  + GHYTQ+VW ++ R 
Sbjct: 68  LEGIQCGESIYMSSNARTWTEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRA 127
Query: 134 GCAKERCNNNH-QFIAICNYDPPGNAAGE 161
           GCA   C ++   +  +C Y P GN  G+
Sbjct: 128 GCAVSYCPSSAWSYFYVCQYCPSGNFQGK 156

>pdb|1WVR|A Chain A, Crystal Structure Of A Crisp Family Ca-Channel Blocker Derived From Snake Venom Length = 221

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 60/142 (42%), Gaps = 9/142 (6%)
Query: 29  QQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS--------HYG 80
           Q   + LHN  RR+V               A + A++    CI  HS            G
Sbjct: 15  QNEIIDLHNSLRRSVNPTASNMLKMEWYPEAAANAERWAYRCIESHSSRDSRVIGGIKCG 74
Query: 81  ENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERC 140
           EN+  A Y      I+  W  E + + Y       + + GHYTQ+VW KS R GCA   C
Sbjct: 75  ENIYMATYPAKWTDIIHAWHGEYKDFKYGVGAVPSDAVIGHYTQIVWYKSYRAGCAAAYC 134
Query: 141 -NNNHQFIAICNYDPPGNAAGE 161
            ++ + +  +C Y P GN  G+
Sbjct: 135 PSSKYSYFYVCQYCPAGNIIGK 156

>pdb|1XX5|A Chain A, Crystal Structure Of Natrin From Naja Atra Snake Venom Length = 221

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 9/149 (6%)
Query: 22  SSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHY-- 79
           S+     Q+  V LHN  RR V               A S A++    C + HS  +   
Sbjct: 8   STRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANTCSLNHSPDNLRV 67
Query: 80  ------GENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRL 133
                 GE++  +    T   I+ +W DE + + Y      P  + GHYTQ+VW ++ R 
Sbjct: 68  LEGIQCGESIYMSSNARTWTEIIHLWHDEYKNFVYGVGANPPGSVTGHYTQIVWYQTYRA 127
Query: 134 GCAKERCNNNH-QFIAICNYDPPGNAAGE 161
           GCA   C ++   +  +C Y P GN  G+
Sbjct: 128 GCAVSYCPSSAWSYFYVCQYCPSGNFQGK 156

>pdb|1U53|A Chain A, Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein From The Nematode Parasite Necator Americanus And A Vaccine Antigen For Human Hookworm Infection Length = 196

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 35/163 (21%)
Query: 28  TQQRYVHLHNEARRNVGIGIG----------------MTWDKTLEDHAHSYAQKLKVDCI 71
            +Q+++ +HN  R +V +G                  M +D  +E  A + A++    C+
Sbjct: 16  ARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNAKQ----CV 71
Query: 72  IEHSVSH----YGENL-----AWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQM---- 118
            +HS  +     GEN+     +  D     +   K W  E        N      +    
Sbjct: 72  FKHSQPNQRKGLGENIFMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRG 131
Query: 119 CGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGE 161
            GHYTQ+VW+++V+LGC  E C+N      +C Y P GN  G+
Sbjct: 132 VGHYTQMVWQETVKLGCYVEACSN--MCYVVCQYGPAGNMMGK 172

>pdb|2VZN|A Chain A, Crystal Structure Of The Major Allergen From Fire Ant Venom, Sol I 3 Length = 218

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 38/169 (22%)
Query: 26  NATQQRYVHLHNEARRNVGIGIGM----------------TWDKTLEDHAHSYAQKLKVD 69
           +A +   V+ HNE R+ V  G  M                TWD  L   A  +A +    
Sbjct: 40  DAEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIAQRWANQ---- 95
Query: 70  CIIEHSVSH------YGENLAWADYD----FTVDHIVKMWVDEKQFYDYNSNTCAPNQ-- 117
           C  EH           G+N+A          T + ++ +W +E + +D    +  P+   
Sbjct: 96  CTFEHDACRNVERFAVGQNIAATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDN 155
Query: 118 ---MCGHYTQVVWRKSVRLGCAK---ERCNNNHQFIAICNYDPPGNAAG 160
                GHYTQ+VW K+ ++GC +   +  +N  +   +CNY P GN  G
Sbjct: 156 ILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLVCNYGPAGNVLG 204

>pdb|3NT8|A Chain A, Crystal Structure Of Na-Asp-1 Length = 424

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 36/166 (21%)
Query: 26  NATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKV--DCIIEHSVSHYGENL 83
           ++ +  ++ +HNE R +V  G+       L  +A   A+ LK+  DC +E S   +G   
Sbjct: 235 DSVRDTFLSVHNEFRSSVARGL---EPDALGGNAPKAAKMLKMVYDCEVEASAIRHGNKC 291
Query: 84  AWA----------------------DYDFTVDHIVKMWVDEKQFYDYNSN---TCA---- 114
            +                       D +       ++W +E + Y    +   T A    
Sbjct: 292 VYQHSHGEDRPGLGENIYKTSVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNR 351
Query: 115 PNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAG 160
           PN   GHYTQ+ W  + +LGCA   CN+      +C Y P GN  G
Sbjct: 352 PNMQIGHYTQMAWDTTYKLGCAVVFCNDFT--FGVCQYGPGGNYMG 395

>pdb|1QNX|A Chain A, Ves V 5, An Allergen From Vespula Vulgaris Venom Length = 209

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 27/162 (16%)
Query: 29  QQRYVHLHNEARRNVGIGI----------------GMTWDKTLEDHAHSYAQKLKVDCII 72
           +Q  +  HN+ R+ +  G+                 + W+  L   A  +A + +     
Sbjct: 46  KQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQYGHDT 105
Query: 73  EHSVSHY--GENLAW-----ADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQM-CGHYTQ 124
              V+ Y  G+N+A      A YD  V  +VKMW DE + Y+        + +  GHYTQ
Sbjct: 106 CRDVAKYQVGQNVALTGSTAAKYDDPV-KLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQ 164
Query: 125 VVWRKSVRLGCAKERCNNN--HQFIAICNYDPPGNAAGERPF 164
           +VW  +  +GC   +      H+   +CNY P GN   E  +
Sbjct: 165 MVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEELY 206

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	164
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	2e-58
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	4e-57
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	2e-44
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	2e-44
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	3e-44
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	2e-43
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	3e-41
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	4e-40
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	4e-37
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	8e-37
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	3e-23
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	1e-17

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1 Length = 135

 Score =  177 bits (451), Expect = 2e-58
 Identities = 67/137 (48%), Positives = 84/137 (61%), Gaps = 4/137 (2%)

Query: 28  TQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWAD 87
           + Q Y+ +HN+AR  VG+G  M+WD  L   A +YA     DC + HS    GENLA   
Sbjct: 3   SPQDYLAVHNDARAQVGVG-PMSWDANLASRAQNYANSRAGDCNLIHS--GAGENLAKGG 59

Query: 88  YDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFI 147
            DFT    V++WV E+  Y+Y +N C   + C HYTQVVWR SVRLGC + RCNN   FI
Sbjct: 60  GDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFI 119

Query: 148 AICNYDPPGNAAGERPF 164
             CNYDP GN  G+RP+
Sbjct: 120 -SCNYDPVGNWIGQRPY 135

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A* Length = 154

 Score =  174 bits (444), Expect = 4e-57
 Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 8/147 (5%)

Query: 22  SSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSH--- 78
            SA+       +  HNE R+  G+   +   K L   A  Y++ L    I++HS      
Sbjct: 3   KSASKQFHNEVLKAHNEYRQKHGVP-PLKLCKNLNREAQQYSEALASTRILKHSPESSRG 61

Query: 79  -YGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAK 137
             GENLAWA YD T   +   W  E + Y++           GH+T +VW+ + ++G  K
Sbjct: 62  QCGENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGK 119

Query: 138 ERCNNNHQFIAICNYDPPGNAAGERPF 164
              ++   F+ +  Y P GN   E  F
Sbjct: 120 ASASDGSSFV-VARYFPAGNVVNEGFF 145

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A Length = 210

 Score =  144 bits (365), Expect = 2e-44
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 17/145 (11%)

Query: 29  QQRYVHLHNEARRNVGIGIG----MTWDKTLEDHAHSYAQKLKVDCIIEHSVSH------ 78
           Q+  V  HN  RR+V         M W+     +A  +A +    C   HS  +      
Sbjct: 6   QKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWADR----CTFAHSPPNTRTVGK 61

Query: 79  --YGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCA 136
              GEN+  +   F    +V+ W DE + + Y      P  + GHYTQVVW KS  +GCA
Sbjct: 62  LRCGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCA 121

Query: 137 KERCNNNHQFIAICNYDPPGNAAGE 161
             +C+++     +C Y P GN  G 
Sbjct: 122 SAKCSSSKYLY-VCQYCPAGNIRGS 145

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus} Length = 196

 Score =  144 bits (364), Expect = 2e-44
 Identities = 39/165 (23%), Positives = 66/165 (40%), Gaps = 27/165 (16%)

Query: 25  NNATQQRYVHLHNEARRNVGIGIG----------------MTWDKTLEDHAHSYAQKLKV 68
           +   +Q+++ +HN  R +V +G                  M +D  +E  A + A++   
Sbjct: 13  SEEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNAKQCVF 72

Query: 69  DCIIEHSVSHYGENLAWA-----DYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQM----C 119
                +     GEN+  +     D     +   K W  E        N      +     
Sbjct: 73  KHSQPNQRKGLGENIFMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGV 132

Query: 120 GHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
           GHYTQ+VW+++V+LGC  E C+N      +C Y P GN  G+  +
Sbjct: 133 GHYTQMVWQETVKLGCYVEACSNMCYV--VCQYGPAGNMMGKDIY 175

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A Length = 221

 Score =  144 bits (364), Expect = 3e-44
 Identities = 43/154 (27%), Positives = 65/154 (42%), Gaps = 17/154 (11%)

Query: 21  LSSANNATQQRYVHLHNEARRNVGIGIG----MTWDKTLEDHAHSYAQKLKVDCIIEHSV 76
            S+     Q+  V LHN  RR V         M W      +A  +A      C + HS 
Sbjct: 7   ESTRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANT----CSLNHSP 62

Query: 77  SH--------YGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWR 128
            +         GE++  +    T   I+ +W DE + + Y      P  + GHYTQ+VW 
Sbjct: 63  DNLRVLEGIQCGESIYMSSNARTWTEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWY 122

Query: 129 KSVRLGCAKERCNNN-HQFIAICNYDPPGNAAGE 161
           ++ R GCA   C ++   +  +C Y P GN  G+
Sbjct: 123 QTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGK 156

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1 Length = 209

 Score =  141 bits (358), Expect = 2e-43
 Identities = 38/169 (22%), Positives = 61/169 (36%), Gaps = 33/169 (19%)

Query: 25  NNATQQRYVHLHNEARRNVGIGIG----------------MTWDKTLEDHAHSYAQKLKV 68
               +Q  +  HN+ R+ +  G+                 + W+  L   A  +A +   
Sbjct: 42  TKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQ--- 98

Query: 69  DCIIEHSVSH------YGENLAWADY----DFTVDHIVKMWVDEKQFYDYNSNTCAPN-Q 117
            C   H           G+N+A              +VKMW DE + Y+        +  
Sbjct: 99  -CQYGHDTCRDVAKYQVGQNVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFL 157

Query: 118 MCGHYTQVVWRKSVRLGCAKERCNNN--HQFIAICNYDPPGNAAGERPF 164
             GHYTQ+VW  +  +GC   +      H+   +CNY P GN   E  +
Sbjct: 158 KTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEELY 206

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta} Length = 218

 Score =  136 bits (345), Expect = 3e-41
 Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 38/174 (21%)

Query: 25  NNATQQRYVHLHNEARRNVGIGIG----------------MTWDKTLEDHAHSYAQKLKV 68
            +A +   V+ HNE R+ V  G                  +TWD  L   A  +A +   
Sbjct: 39  TDAEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIAQRWANQ--- 95

Query: 69  DCIIEHSVSH------YGENLAW----ADYDFTVDHIVKMWVDEKQFYDYNSNTCAP--- 115
            C  EH           G+N+A          T + ++ +W +E + +D    +  P   
Sbjct: 96  -CTFEHDACRNVERFAVGQNIAATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDD 154

Query: 116 --NQMCGHYTQVVWRKSVRLGCAKERC---NNNHQFIAICNYDPPGNAAGERPF 164
                 GHYTQ+VW K+ ++GC +      +N  +   +CNY P GN  G   +
Sbjct: 155 NILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLVCNYGPAGNVLGAPIY 208

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A Length = 205

 Score =  133 bits (336), Expect = 4e-40
 Identities = 49/167 (29%), Positives = 69/167 (41%), Gaps = 31/167 (18%)

Query: 22  SSANNATQQRYVHLHNEARRNVGIG----IGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS 77
              N    +  V +HN+ R  V       + MTWD  L   A ++A      C   H+  
Sbjct: 12  DIENEDFIKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWASN----CQFSHNTR 67

Query: 78  H------------YGENLAWADYD-FTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQ 124
                         GEN+       F+V   +  W DE Q YD+ +  C   ++CGHYTQ
Sbjct: 68  LKPPHKLHPNFTSLGENIWTGSVPIFSVSSAITNWYDEIQDYDFKTRIC--KKVCGHYTQ 125

Query: 125 VVWRKSVRLGCAKERCNN-------NHQFIAICNYDPPGNAAGERPF 164
           VVW  S ++GCA + C         ++    ICNY P GN     P+
Sbjct: 126 VVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGN-YPTWPY 171

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score =  130 bits (329), Expect = 4e-37
 Identities = 30/194 (15%), Positives = 60/194 (30%), Gaps = 36/194 (18%)

Query: 1   MSPINSLAIFHLVVLAARIHLSSA-------NNATQQRYVHLHNEARRNVGIGIG----- 48
            SP+    +F +    A     S         ++ +Q ++  HN ARR V  G+      
Sbjct: 2   FSPVVVSVVFTIAFCNASPARDSFGCSNSGITDSDRQAFLDFHNNARRRVAKGLEDSNSG 61

Query: 49  ----------MTWDKTLEDHAHSYAQKLKVDCIIEHSVSH-YGENLAWA-------DYDF 90
                     ++WD  +E       Q     C    +      +N           D   
Sbjct: 62  KLNPAKNMYKLSWDCAMEQQLQDAIQS----CPSGFAGIQGVAQNTMSWSSSGGYPDPSV 117

Query: 91  TVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAIC 150
            ++  +  W    +      +          ++ +V+ ++ +LGCA + C         C
Sbjct: 118 KIEPTLSGWWSGAKKNGVGPDNKYTGGGLFAFSNMVYSETTKLGCAYKVCGTKLAV--SC 175

Query: 151 NYDPPGNAAGERPF 164
            Y+  G    +  +
Sbjct: 176 IYNGVGYITNQPMW 189

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score =  130 bits (327), Expect = 8e-37
 Identities = 41/172 (23%), Positives = 67/172 (38%), Gaps = 38/172 (22%)

Query: 25  NNATQQRYVHLHNEARRNVGIGIG----------------MTWDKTLEDHAHSYAQKLKV 68
            ++ +  ++ +HNE R +V  G+                 M +D  +E  A  +  K   
Sbjct: 234 TDSVRDTFLSVHNEFRSSVARGLEPDALGGNAPKAAKMLKMVYDCEVEASAIRHGNK--- 290

Query: 69  DCIIEHSVSH----YGENLAWA-----DYDFTVDHIVKMWVDEKQFYDYNSNTCA----- 114
            C+ +HS        GEN+        D +       ++W +E + Y    +        
Sbjct: 291 -CVYQHSHGEDRPGLGENIYKTSVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALW 349

Query: 115 --PNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF 164
             PN   GHYTQ+ W  + +LGCA   CN+      +C Y P GN  G   +
Sbjct: 350 NRPNMQIGHYTQMAWDTTYKLGCAVVFCNDFTFG--VCQYGPGGNYMGHVIY 399

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C* Length = 233

 Score = 90.5 bits (224), Expect = 3e-23
 Identities = 24/168 (14%), Positives = 42/168 (25%), Gaps = 34/168 (20%)

Query: 25  NNATQQRYVHLHNEARRNVGIGIG----------MTWDKTLEDHAHSYAQKLKVDCIIEH 74
               +   +   N+ R +V  G            + WD  L   A  + +     C+ E 
Sbjct: 37  LKEHRNEILSKINDVRDHVAKGSWGLPVAARMKVVVWDAELAGLAKRHTKG----CVGET 92

Query: 75  SV-------SHYGENLAW------ADYDFTVDHIVKMWVDEKQFYDY----NSNTCAPNQ 117
                       G+                +D  VK    +K         N     PN 
Sbjct: 93  HACRNTERFWLPGQLNFKYSGDKLPRIKELIDDAVKKGHLQKHNITREIIENYRENGPNG 152

Query: 118 MCGHYTQVVWRKSVRLGCAKERCNNN--HQFIAICNYDPPGNAAGERP 163
                   +  +   +GC      +    + +  CN+    N  G   
Sbjct: 153 DVKELALAISDRVTAVGCGLTTWEDGAKARALLTCNFS-SQNTRGRPV 199

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A Length = 206

 Score = 75.1 bits (184), Expect = 1e-17
 Identities = 20/148 (13%), Positives = 40/148 (27%), Gaps = 32/148 (21%)

Query: 25  NNATQQRYVHLHNEARRNVGIGIG-----------MTWDKTLEDHAHSYAQKLKVDCIIE 73
           +   ++     HN  R+ +  G             + +D  LE+ A    +         
Sbjct: 15  DRPFREAIDTFHNGLRQRIAKGEAEGYGPAREMYGLVYDCGLEEEARKEIKL----PGYA 70

Query: 74  HSVSHYGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRL 133
                     +       +  + ++    + F                  QVV+ K+ R 
Sbjct: 71  DLHHRGVTRFSGDYEGSAISALKEIL---ETFSA----------DKNSMRQVVYPKATRF 117

Query: 134 GCAKERCNNN----HQFIAICNYDPPGN 157
           GC+     N      +   +C YD    
Sbjct: 118 GCSGRLRRNKKTGMRRMDWVCVYDKKPK 145

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	164
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	100.0
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	100.0
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	100.0
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	100.0
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	100.0
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	100.0
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	100.0
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	100.0
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	100.0
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	100.0
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	100.0
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	99.97
4ifa_A	339	Extracellular protein containing A SCP domain; vac	99.67
4h0a_A	323	Uncharacterized protein; CAP protein family, cyste	99.45

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1

Probab=100.00  E-value=3.4e-46  Score=259.01  Aligned_cols=134  Identities=50%  Similarity=0.951  Sum_probs=126.0

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHHhhhccCccccCCCCccceEEeecCCCCHHHHHHHHHhccccC
Q 048151           27 ATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFY  106 (164)
Q Consensus        27 ~~~~~il~~hN~~R~~~~~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~~~gen~~~~~~~~~~~~~v~~W~~e~~~y  106 (164)
                      +.+++||+.||.+|++++++ +|+||++|+..||.||++|+++|.+.|+++  |||++++++...+.++|+.|++|.+.|
T Consensus         2 ~~~~~iL~~HN~~R~~~~~~-~L~Wd~~La~~Aq~~A~~~a~~c~~~hs~~--GENla~~~~~~~~~~~v~~W~~E~~~y   78 (135)
T 1cfe_A            2 NSPQDYLAVHNDARAQVGVG-PMSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAKGGGDFTGRAAVQLWVSERPSY   78 (135)
T ss_dssp             CSHHHHHHHHHHHHHHTTCC-CCEECSHHHHHHHHHHHHHTTTCCSCSCSS--SBCCEECSSSCCHHHHHHHHHTTGGGE
T ss_pred             cHHHHHHHHHHHHHHHcCCC-ccCcCHHHHHHHHHHHHHHhcCCCcccCCC--CeEEEEecCCCCHHHHHHHHHhHHhhC
Confidence            45889999999999999999 999999999999999999999999999887  999998765568999999999999999


Q ss_pred             cCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCCCEEEEEEEecCCCCCCCCCCC
Q 048151          107 DYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF  164 (164)
Q Consensus       107 ~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~~~Y  164 (164)
                      ++..+.+..+..+||||||||+++++||||++.|.++..++ ||+|+|+||+.|++||
T Consensus        79 ~~~~~~~~~~~~~gHfTQ~vW~~t~~vGCa~~~c~~~~~~~-VC~Y~p~GN~~g~~pY  135 (135)
T 1cfe_A           79 NYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFI-SCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             EGGGTEECSSSCCSSHHHHHCTTCCEEEEEEEECTTSSEEE-EEECSSCCSCTTSCCC
T ss_pred             CCCCCCcCCCCcccceeeeEEccCcEEeEEEEEeCCCCEEE-EEEEeCCCCCCCCCCC
Confidence            99988887778899999999999999999999998877888 9999999999999999

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A*

Probab=100.00  E-value=1.5e-45  Score=260.91  Aligned_cols=135  Identities=30%  Similarity=0.589  Sum_probs=125.8

Q ss_pred             hHHHHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHHhhhccCccccCC----CCccceEEeecCCCCHHHHHHHHHh
Q 048151           26 NATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSV----SHYGENLAWADYDFTVDHIVKMWVD  101 (164)
Q Consensus        26 ~~~~~~il~~hN~~R~~~~~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~----~~~gen~~~~~~~~~~~~~v~~W~~  101 (164)
                      ++++++||+.||.+|++++++ +|+||++|++.||.||++++.+|.+.|++    +.+||||++...+....++|+.||+
T Consensus         7 ~~f~~~iL~~HN~~R~~~~~~-~L~wd~~La~~Aq~~A~~~a~~~~~~hs~~~~~~~~GeNl~~~~~~~~~~~~v~~W~~   85 (154)
T 4aiw_A            7 KQFHNEVLKAHNEYRQKHGVP-PLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYDQTGKEVADRWYS   85 (154)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCC-CCEECHHHHHHHHHHHHHHHHHTCCCCCHHHHTTSSEEEEEEESSCCCHHHHHHHHHG
T ss_pred             HHHHHHHHHHHHHHHHHcCCC-cccccHHHHHHHHHHHHHhhhcccccccccCCCCCCCeeeEecCCCCCHHHHHHHHHH
Confidence            689999999999999999999 99999999999999999999999999974    3789999998877789999999999


Q ss_pred             ccccCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCCCEEEEEEEecCCCCCCCCCCC
Q 048151          102 EKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF  164 (164)
Q Consensus       102 e~~~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~~~Y  164 (164)
                      |.+.|+|.++.+..  .+||||||||++|++||||++.|.++..++ ||+|+|+||+.|+.||
T Consensus        86 E~~~y~~~~~~~~~--~~gHfTQ~VW~~t~~vGCg~a~c~~~~~~v-VC~Y~P~GN~~g~~~y  145 (154)
T 4aiw_A           86 EIKNYNFQQPGFTS--GTGHFTAMVWKNTKKMGVGKASASDGSSFV-VARYFPAGNVVNEGFF  145 (154)
T ss_dssp             GGGGCCTTSCSCCT--TTHHHHHHHCTTCCEEEEEEEECTTSCEEE-EEEEESCCCCCSTTHH
T ss_pred             HhhhcccCCCCcCC--CcCCeeeeehhhhceeeeEEEEcCCCCEEE-EEEEeCCCccCCccch
Confidence            99999999888764  499999999999999999999999888888 9999999999999876

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A

Probab=100.00  E-value=1.3e-39  Score=241.13  Aligned_cols=133  Identities=34%  Similarity=0.683  Sum_probs=119.6

Q ss_pred             hHHHHHHHHHHHHHHhhcC-----CCCCccccHHHHHHHHHHHHhhhccCccccCCC--------CccceEEeecCCCCH
Q 048151           26 NATQQRYVHLHNEARRNVG-----IGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS--------HYGENLAWADYDFTV   92 (164)
Q Consensus        26 ~~~~~~il~~hN~~R~~~~-----~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~--------~~gen~~~~~~~~~~   92 (164)
                      +++++.||+.||.+|++++     |. +|+||++||..||.||+    +|.+.|++.        .+|||+++++....+
T Consensus         3 ~~~~~~iL~~HN~~R~~~~~~A~nM~-~L~Wd~~La~~Aq~~A~----~C~~~Hs~~~~r~~~~~~~GENl~~~~~~~~~   77 (210)
T 2ddb_A            3 KNYQKEIVDKHNALRRSVKPTARNML-QMKWNSHAAQNAKRWAD----RCTFAHSPPNTRTVGKLRCGENIFMSSQPFPW   77 (210)
T ss_dssp             -CHHHHHHHHHHHHHTTCSSCBSSCB-CCEECHHHHHHHHHHHT----TTCCSCCCGGGSEETTEECEEEEEEESSCCCH
T ss_pred             HHHHHHHHHHHHHHHHHcCCccccCc-ccccCHHHHHHHHHHHh----cCCCCCCCccccccCCCCCcceEEEEcCCCCH
Confidence            4678999999999999997     55 89999999999999999    999999853        479999988765678


Q ss_pred             HHHHHHHHhccccCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCCCEEEEEEEecCCCCCCCC--CCC
Q 048151           93 DHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGE--RPF  164 (164)
Q Consensus        93 ~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~--~~Y  164 (164)
                      .++|+.||+|.+.|+|..+.+..+..+||||||||+++++||||++.|..+.+++ ||+|+|+||+.|+  +||
T Consensus        78 ~~av~~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~-VC~Y~P~GN~~g~~~~pY  150 (210)
T 2ddb_A           78 SGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCASAKCSSSKYLY-VCQYCPAGNIRGSIATPY  150 (210)
T ss_dssp             HHHHHHHHGGGGGEETTTEESSTTSCCHHHHHHTCTTCCEEEEEEEEEETTEEEE-EEEEESCSSSTTCTTCSS
T ss_pred             HHHHHHHHHHhhhCCCCCCCCCCCCcccchhhhhhhhccEeeEEEEEcCCCCEEE-EEEeeCCCCCCCCccCCC
Confidence            9999999999999999887666677899999999999999999999998776777 9999999999999  898

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A

Probab=100.00  E-value=4.4e-39  Score=239.94  Aligned_cols=133  Identities=33%  Similarity=0.684  Sum_probs=120.4

Q ss_pred             hHHHHHHHHHHHHHHhhcC-----CCCCccccHHHHHHHHHHHHhhhccCccccCCC--------CccceEEeecCCCCH
Q 048151           26 NATQQRYVHLHNEARRNVG-----IGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS--------HYGENLAWADYDFTV   92 (164)
Q Consensus        26 ~~~~~~il~~hN~~R~~~~-----~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~--------~~gen~~~~~~~~~~   92 (164)
                      +++++.||+.||.+|++++     |. +|+||++||..||.||+    +|.+.|++.        .+|||+++++....+
T Consensus        12 ~~~~~~iL~~HN~~R~~~~~~A~nM~-~L~Wd~~La~~Aq~~A~----~C~~~Hs~~~~r~~~~~~~GENl~~~~~~~~~   86 (221)
T 1xta_A           12 KKKQKEIVDLHNSLRRRVSPTASNML-KMEWYPEAASNAERWAN----TCSLNHSPDNLRVLEGIQCGESIYMSSNARTW   86 (221)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSCBSSCB-CCEECHHHHHHHHHHHT----TTCCSCCCGGGCEETTEECEEEEEEESSCCCH
T ss_pred             HHHHHHHHHHHHHHHHhcCCccccCc-cCccCHHHHHHHHHHHh----cCCCCCcCccccccCCCCCceEEEeecCCCCH
Confidence            5789999999999999997     55 89999999999999999    999999863        479999988765678


Q ss_pred             HHHHHHHHhccccCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCC--CEEEEEEEecCCCCCCCC--CCC
Q 048151           93 DHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNN--HQFIAICNYDPPGNAAGE--RPF  164 (164)
Q Consensus        93 ~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~--~~~~~vC~Y~p~gn~~g~--~~Y  164 (164)
                      .++|+.||+|...|++..+.+..+..+||||||||+++++||||++.|..+  ..++ ||+|+|+||+.|+  +||
T Consensus        87 ~~av~~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~-VC~Y~P~GN~~g~~~~pY  161 (221)
T 1xta_A           87 TEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFY-VCQYCPSGNFQGKTATPY  161 (221)
T ss_dssp             HHHHHHHHGGGGGEETTTEESSTTCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEE-EEEEESCCCCTTTTTCSS
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCchhHHHHHHHHhcCEeeEEEEEcCCCCccEEE-EEEEeCCcCCCCCcCCCc
Confidence            999999999999999988776667789999999999999999999999875  6778 9999999999999  898

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1

Probab=100.00  E-value=1.7e-38  Score=235.07  Aligned_cols=133  Identities=27%  Similarity=0.566  Sum_probs=114.0

Q ss_pred             hHHHHHHHHHHHHHHhhcC-----------------CCCCccccHHHHHHHHHHHHhhhccCccccCCC------Cccce
Q 048151           26 NATQQRYVHLHNEARRNVG-----------------IGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS------HYGEN   82 (164)
Q Consensus        26 ~~~~~~il~~hN~~R~~~~-----------------~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~------~~gen   82 (164)
                      +++++.||+.||.+|++++                 |+ +|+||++||..||.||+    +|.+.|+..      .+|||
T Consensus        43 ~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~-~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~~~GeN  117 (209)
T 1qnx_A           43 KQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMK-NLVWNDELAYVAQVWAN----QCQYGHDTCRDVAKYQVGQN  117 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCC-CCEECHHHHHHHHHHHT----TCCCSCCSCCCCSSSCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhcCccccCCCCCCCcccccc-ccccCHHHHHHHHHHHh----cCcccCCCccCCCCCCCccE
Confidence            4678999999999999983                 67 99999999999999999    999998752      48999


Q ss_pred             EEeecC----CCCHHHHHHHHHhccccCcCCCCCCC-CCCcchHHHHHHHHcCCeeeEEEEEeCCC---CEEEEEEEecC
Q 048151           83 LAWADY----DFTVDHIVKMWVDEKQFYDYNSNTCA-PNQMCGHYTQVVWRKSVRLGCAKERCNNN---HQFIAICNYDP  154 (164)
Q Consensus        83 ~~~~~~----~~~~~~~v~~W~~e~~~y~~~~~~~~-~~~~~~~f~qmvw~~~~~vGCa~~~c~~~---~~~~~vC~Y~p  154 (164)
                      +++...    ...+.++|+.||+|...|++.++... .+..++|||||||+++++||||++.|..+   ..++ ||+|+|
T Consensus       118 l~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~-VC~Y~P  196 (209)
T 1qnx_A          118 VALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYL-VCNYGP  196 (209)
T ss_dssp             EEEEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEE-EEEEES
T ss_pred             EEEecccCCCcccHHHHHHHHHHhhhhcCCccCCCCCCCCcccchhhhhhhcCcEeeeEEEEEeCCCceeEEE-EEEeCC
Confidence            988652    23688999999999999999854221 13468999999999999999999999765   2567 999999


Q ss_pred             CCCCCCCCCC
Q 048151          155 PGNAAGERPF  164 (164)
Q Consensus       155 ~gn~~g~~~Y  164 (164)
                      +||+.|++||
T Consensus       197 ~GN~~g~~~Y  206 (209)
T 1qnx_A          197 SGNFKNEELY  206 (209)
T ss_dssp             CCCCTTSCSS
T ss_pred             CCCCCCCCCC
Confidence            9999999998

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus}

Probab=100.00  E-value=3.3e-38  Score=231.37  Aligned_cols=132  Identities=30%  Similarity=0.611  Sum_probs=115.3

Q ss_pred             hHHHHHHHHHHHHHHhhcC-----------------CCCCccccHHHHHHHHHHHHhhhccCccccCCC----CccceEE
Q 048151           26 NATQQRYVHLHNEARRNVG-----------------IGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS----HYGENLA   84 (164)
Q Consensus        26 ~~~~~~il~~hN~~R~~~~-----------------~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~----~~gen~~   84 (164)
                      +++++.||+.||.+|++++                 |. +|+||++||..||.||+    +|.+.|++.    .+|||++
T Consensus        14 ~~~~~~iL~~HN~~R~~~a~G~~~~~~g~~~p~A~nM~-~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~GeNl~   88 (196)
T 1u53_A           14 EEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMK-TMAYDCEVEKTAMNNAK----QCVFKHSQPNQRKGLGENIF   88 (196)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCBCTTSSBCCCBSSCB-CCEECHHHHHHHHHHHT----TCCCCCCCGGGSTTCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCcccCCCCcCCccccch-hcccCHHHHHHHHHHHH----hCccCCCccccCCCCCeEEE
Confidence            5789999999999999983                 45 89999999999999999    999999842    5899999


Q ss_pred             eecCCC-----CHHHHHHHHHhccccCcCCC-CCCC---CCCcchHHHHHHHHcCCeeeEEEEEeCCCCEEEEEEEecCC
Q 048151           85 WADYDF-----TVDHIVKMWVDEKQFYDYNS-NTCA---PNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPP  155 (164)
Q Consensus        85 ~~~~~~-----~~~~~v~~W~~e~~~y~~~~-~~~~---~~~~~~~f~qmvw~~~~~vGCa~~~c~~~~~~~~vC~Y~p~  155 (164)
                      +.++..     .+.++|+.||+|...|++.. +.+.   .+..++|||||||+++++||||++.|.+ ..++ ||+|+|+
T Consensus        89 ~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~ghfTQ~VW~~t~~vGCa~~~c~~-~~~~-VC~Y~p~  166 (196)
T 1u53_A           89 MSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCYVEACSN-MCYV-VCQYGPA  166 (196)
T ss_dssp             EESCTTCCHHHHHHHHHHHHHTHHHHHCCCSCCBCCHHHHTTTCHHHHHHTCTTCCEEEEEEEECSS-CEEE-EEEEESC
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHHcCCCcccccCccccCccccchheeeecccCEEeeEEEEeCC-CEEE-EEEeCCC
Confidence            776432     36899999999999999987 5554   2567999999999999999999999976 5778 9999999


Q ss_pred             CCCCCCCCC
Q 048151          156 GNAAGERPF  164 (164)
Q Consensus       156 gn~~g~~~Y  164 (164)
                      ||+.|++||
T Consensus       167 GN~~g~~~Y  175 (196)
T 1u53_A          167 GNMMGKDIY  175 (196)
T ss_dssp             CCCTTSBSS
T ss_pred             CCCCCCcCC
Confidence            999999998

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A

Probab=100.00  E-value=1.6e-37  Score=229.18  Aligned_cols=130  Identities=38%  Similarity=0.740  Sum_probs=115.0

Q ss_pred             hHHHHHHHHHHHHHHhhcC-----CCCCccccHHHHHHHHHHHHhhhccCccccCC------------CCccceEEeec-
Q 048151           26 NATQQRYVHLHNEARRNVG-----IGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSV------------SHYGENLAWAD-   87 (164)
Q Consensus        26 ~~~~~~il~~hN~~R~~~~-----~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~------------~~~gen~~~~~-   87 (164)
                      ++++++||+.||.+|++++     |. +|+||++||..||.||+    +|.+.|++            ..+|||++.++ 
T Consensus        16 ~~f~~~~L~~HN~~R~~~~~~A~nM~-~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~~~~~~~~~GeNl~~~~~   90 (205)
T 3q2u_A           16 EDFIKDCVRIHNKFRSEVKPTASDML-YMTWDPALAQIAKAWAS----NCQFSHNTRLKPPHKLHPNFTSLGENIWTGSV   90 (205)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSCBSSCB-CCEECHHHHHHHHHHHT----TCBSSCCTTSSTTCCSSTTCSSCEEEEEEEET
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcccCc-cCccCHHHHHHHHHHHH----hCCCCCCccccccccccCCCCCCceEEEEccC
Confidence            6799999999999999997     56 89999999999999999    99988864            25899998876 


Q ss_pred             CCCCHHHHHHHHHhccccCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCC--------CCEEEEEEEecCCCCCC
Q 048151           88 YDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNN--------NHQFIAICNYDPPGNAA  159 (164)
Q Consensus        88 ~~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~--------~~~~~~vC~Y~p~gn~~  159 (164)
                      ....+.++|+.||+|.+.|+|..+.+.  ..++|||||||+++++||||++.|..        ...++ ||+|+|+||+ 
T Consensus        91 ~~~~~~~~v~~W~~E~~~y~~~~~~~~--~~~gHfTQ~VW~~t~~vGCa~~~c~~~~g~~~~~~~~~~-VC~Y~P~GN~-  166 (205)
T 3q2u_A           91 PIFSVSSAITNWYDEIQDYDFKTRICK--KVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHF-ICNYGPGGNY-  166 (205)
T ss_dssp             TTCCHHHHHHHHHGGGGGEETTTTEES--SCCHHHHHHTCTTCCEEEEEEEEESCCBTCSSCCSEEEE-EEEEESCCCC-
T ss_pred             CCCCHHHHHHHHHhHHHhcCCCCCCcc--chhHHHHHHHhhcccEeeeEEEEcCCCcCcccccccEEE-EEEEECCCCc-
Confidence            346889999999999999999887664  56999999999999999999999975        24567 9999999999 


Q ss_pred             CCCCC
Q 048151          160 GERPF  164 (164)
Q Consensus       160 g~~~Y  164 (164)
                      |++||
T Consensus       167 ~~~pY  171 (205)
T 3q2u_A          167 PTWPY  171 (205)
T ss_dssp             SSCSS
T ss_pred             CCCCC
Confidence            88888

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta}

Probab=100.00  E-value=5.7e-38  Score=233.61  Aligned_cols=133  Identities=30%  Similarity=0.644  Sum_probs=112.7

Q ss_pred             hHHHHHHHHHHHHHHhhcC-----------------CCCCccccHHHHHHHHHHHHhhhccCccccCCC------Cccce
Q 048151           26 NATQQRYVHLHNEARRNVG-----------------IGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS------HYGEN   82 (164)
Q Consensus        26 ~~~~~~il~~hN~~R~~~~-----------------~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~------~~gen   82 (164)
                      +++++.||+.||.+|++++                 |+ +|+||++||..||.||+    +|.+.|++.      .+|||
T Consensus        40 ~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~-~L~Wd~~La~~Aq~~A~----~C~~~Hs~c~~~~~~~~GeN  114 (218)
T 2vzn_A           40 DAEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMP-NLTWDPELATIAQRWAN----QCTFEHDACRNVERFAVGQN  114 (218)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCTTSCCCCBSCCC-CCEECHHHHHHHHHHHT----TCCSSCCSCCCCSSSCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCchhhch-hccCCHHHHHHHHHHHH----hCCcCCCCCCCCccCCCceE
Confidence            4678999999999999983                 57 99999999999999999    999998761      48999


Q ss_pred             EEeecCC----CCHHHHHHHHHhccccCcCCCC-C--CC--CCCcchHHHHHHHHcCCeeeEEEEEeCC-C---CEEEEE
Q 048151           83 LAWADYD----FTVDHIVKMWVDEKQFYDYNSN-T--CA--PNQMCGHYTQVVWRKSVRLGCAKERCNN-N---HQFIAI  149 (164)
Q Consensus        83 ~~~~~~~----~~~~~~v~~W~~e~~~y~~~~~-~--~~--~~~~~~~f~qmvw~~~~~vGCa~~~c~~-~---~~~~~v  149 (164)
                      +++....    ....++|+.||+|...|++... .  ..  .+..++|||||||+++++||||++.|.. +   ..++ |
T Consensus       115 l~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~v-V  193 (218)
T 2vzn_A          115 IAATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYL-V  193 (218)
T ss_dssp             EEEEEECC-CCCCHHHHHHHHHGGGGGCCGGGSSSCCCCHHHHHHHHHHHHHTCTTCCEEEEEEEEEECTTSCEEEEE-E
T ss_pred             EEEEeccCCccchHHHHHHHHHHHHHhcCcccccCCCCCcccCCCcchHHHHHHHhcCEEeEEEEEEeCCCCeEEEEE-E
Confidence            9886522    2567999999999999998742 1  11  1245899999999999999999999976 3   3577 9


Q ss_pred             EEecCCCCCCCCCCC
Q 048151          150 CNYDPPGNAAGERPF  164 (164)
Q Consensus       150 C~Y~p~gn~~g~~~Y  164 (164)
                      |+|+|+||+.|++||
T Consensus       194 C~Y~P~GN~~g~~~y  208 (218)
T 2vzn_A          194 CNYGPAGNVLGAPIY  208 (218)
T ss_dssp             EEEESCCCCTTSCSS
T ss_pred             EEECCCCCCCCCccc
Confidence            999999999999998

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C*

Probab=100.00  E-value=4.8e-36  Score=225.22  Aligned_cols=132  Identities=17%  Similarity=0.260  Sum_probs=110.7

Q ss_pred             hHHHHHHHHHHHHHHhhc-----------CCCCCccccHHHHHHHHHHHHhhhccCccccCC----C---CccceEEeec
Q 048151           26 NATQQRYVHLHNEARRNV-----------GIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSV----S---HYGENLAWAD   87 (164)
Q Consensus        26 ~~~~~~il~~hN~~R~~~-----------~~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~----~---~~gen~~~~~   87 (164)
                      +++++.||+.||.+|+++           .|+ +|+||++||..||.||+    +|.+.|++    .   .+|||++..+
T Consensus        38 ~~~~~~il~~HN~~R~~va~G~~~~P~A~nM~-~L~Wd~~La~~Aq~~a~----~C~~~h~~c~~~~~~~~~Gen~~~~~  112 (233)
T 3u3l_C           38 KEHRNEILSKINDVRDHVAKGSWGLPVAARMK-VVVWDAELAGLAKRHTK----GCVGETHACRNTERFWLPGQLNFKYS  112 (233)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCTTCCCBSSCB-CCEECHHHHHHHHHHHT----TCCSCCCCBCCCSSCSSCEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCCCccccCC-ccEECHHHHHHHHHHHH----hCCCCCCcccccCcCCcCeEEEEEec
Confidence            578999999999999999           378 99999999999999999    99998875    1   4899887655


Q ss_pred             CC--C----CHHHHHHHHHhccccCcCCC----CCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCC---CEEEEEEEecC
Q 048151           88 YD--F----TVDHIVKMWVDEKQFYDYNS----NTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNN---HQFIAICNYDP  154 (164)
Q Consensus        88 ~~--~----~~~~~v~~W~~e~~~y~~~~----~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~---~~~~~vC~Y~p  154 (164)
                      +.  .    .+.++|+.||+|.+.|++..    +....+..++|||||||+++++||||++.|..+   ..++ ||+|+|
T Consensus       113 ~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~gHfTQmVW~~t~~vGCa~~~c~~~~~~~~~~-VC~Y~p  191 (233)
T 3u3l_C          113 GDKLPRIKELIDDAVKKGHLQKHNITREIIENYRENGPNGDVKELALAISDRVTAVGCGLTTWEDGAKARALL-TCNFSS  191 (233)
T ss_dssp             ESSCCCHHHHHHHHHHHHHGGGGTCCHHHHHSCCSCC--CCCHHHHHHTCTTCCEEEEEEEEEEETTEEEEEE-EEEESC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHhhhCHHHHhcCCCcccccchhhhHHHhhhcCCeeeeEEEEEEcCCeeEEEE-EEECCC
Confidence            32  1    36899999999999998653    122235679999999999999999999999764   3567 999997


Q ss_pred             CCCCCCCCCC
Q 048151          155 PGNAAGERPF  164 (164)
Q Consensus       155 ~gn~~g~~~Y  164 (164)
                       ||+.|++||
T Consensus       192 -GN~~g~~~Y  200 (233)
T 3u3l_C          192 -QNTRGRPVY  200 (233)
T ss_dssp             -CCCTTSCSS
T ss_pred             -CCCCCCcee
Confidence             999999998

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=100.00  E-value=8.8e-36  Score=240.98  Aligned_cols=132  Identities=17%  Similarity=0.346  Sum_probs=114.9

Q ss_pred             hHHHHHHHHHHHHHHhhcC----------------CCCCccccHHHHHHHHHHHHhhhccCccccCCC-CccceEEeec-
Q 048151           26 NATQQRYVHLHNEARRNVG----------------IGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS-HYGENLAWAD-   87 (164)
Q Consensus        26 ~~~~~~il~~hN~~R~~~~----------------~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~-~~gen~~~~~-   87 (164)
                      ++.|+.||+.||.+|++++                |. +|+||++||..||.||+    +|.+.|+.. .+|||++... 
T Consensus        34 ~~~~~~il~~HN~~R~~~A~G~~~~~~~~~p~A~nM~-~L~Wd~eLa~~Aq~~a~----~C~~~h~~~~~~GeNl~~~~~  108 (424)
T 3nt8_A           34 DSDRQAFLDFHNNARRRVAKGLEDSNSGKLNPAKNMY-KLSWDCAMEQQLQDAIQ----SCPSGFAGIQGVAQNTMSWSS  108 (424)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCBCSSSBCCCEESCB-CCEECHHHHHHHHHHCT----TCCSSCCCCTTCEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCCCCCcccccCC-ccccCHHHHHHHHHHHh----hCCCcCCCCCCceeeEEeccc
Confidence            5689999999999999993                55 89999999999999999    999988765 6999998764 


Q ss_pred             -CC-----CCHHHHHHHHHhccccCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCCCEEEEEEEecCCCCCCCC
Q 048151           88 -YD-----FTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGE  161 (164)
Q Consensus        88 -~~-----~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~  161 (164)
                       +.     ..++++|+.||+|.+.|++.......+..++|||||||+++++||||++.|.. ..++ ||+|+|+||+.|+
T Consensus       109 ~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~ghfTqmvw~~t~~vGCa~~~c~~-~~~~-VC~Y~p~GN~~g~  186 (424)
T 3nt8_A          109 SGGYPDPSVKIEPTLSGWWSGAKKNGVGPDNKYTGGGLFAFSNMVYSETTKLGCAYKVCGT-KLAV-SCIYNGVGYITNQ  186 (424)
T ss_dssp             TTCCSCGGGGHHHHHHHHHTHHHHHCCCTTCBCCCTTCHHHHHHHCTTCCEEEEEEEEETT-EEEE-EEEESSCCCSTTC
T ss_pred             cCCcCCHHHHHHHHHHHHHHHHHHcCCcccccCCCcchHHHHHHHHHhcCeeceEEEEeCC-cEEE-EEEECCCCCcccc
Confidence             11     14789999999999999998544434556999999999999999999999976 5777 9999999999999


Q ss_pred             CCC
Q 048151          162 RPF  164 (164)
Q Consensus       162 ~~Y  164 (164)
                      +||
T Consensus       187 ~~Y  189 (424)
T 3nt8_A          187 PMW  189 (424)
T ss_dssp             BSS
T ss_pred             ccc
Confidence            998

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=100.00  E-value=1.6e-34  Score=233.68  Aligned_cols=133  Identities=31%  Similarity=0.628  Sum_probs=114.9

Q ss_pred             hHHHHHHHHHHHHHHhhcCCC----------------CCccccHHHHHHHHHHHHhhhccCccccCCC----CccceEEe
Q 048151           26 NATQQRYVHLHNEARRNVGIG----------------IGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS----HYGENLAW   85 (164)
Q Consensus        26 ~~~~~~il~~hN~~R~~~~~~----------------~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~----~~gen~~~   85 (164)
                      +++++.||+.||.+|++++.+                .+|+||++||..||.||+    +|.+.|++.    .+|||+++
T Consensus       235 ~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~nM~~L~Wd~~La~~Aq~~a~----~C~~~h~~~~~~~~~GeNl~~  310 (424)
T 3nt8_A          235 DSVRDTFLSVHNEFRSSVARGLEPDALGGNAPKAAKMLKMVYDCEVEASAIRHGN----KCVYQHSHGEDRPGLGENIYK  310 (424)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCSBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHT----TCCSSCCCTTTSTTCEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCCCCchhceEhHHHHHHHHHHHH----hCcccCCCccccCccceeEEe
Confidence            578999999999999998632                279999999999999999    999999764    59999998


Q ss_pred             ecC-CC----CHHHHHHHHHhccccCcCCCCC-C------CCCCcchHHHHHHHHcCCeeeEEEEEeCCCCEEEEEEEec
Q 048151           86 ADY-DF----TVDHIVKMWVDEKQFYDYNSNT-C------APNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYD  153 (164)
Q Consensus        86 ~~~-~~----~~~~~v~~W~~e~~~y~~~~~~-~------~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~~~~~~vC~Y~  153 (164)
                      .+. ..    .++++|+.||+|.+.|++.... +      ..+..++|||||||+++++||||++.|.++ .++ ||+|+
T Consensus       311 ~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~-~~~-VC~Y~  388 (424)
T 3nt8_A          311 TSVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKLGCAVVFCNDF-TFG-VCQYG  388 (424)
T ss_dssp             ESSTTCCHHHHHHHHHHHHHTHHHHTCCCTTCBCCHHHHTCTTCCCHHHHHHHCTTCCEEEEEEEECSSS-EEE-EEEEE
T ss_pred             cccCCCchHHHHHHHHHHHHHHHHhcCCCCCcccccccccCCCCcccchHHHhhhhcceeeeEEEEeCCC-eEE-EEEec
Confidence            763 22    5789999999999999986433 1      135679999999999999999999999775 678 99999


Q ss_pred             CCCCCCCCCCC
Q 048151          154 PPGNAAGERPF  164 (164)
Q Consensus       154 p~gn~~g~~~Y  164 (164)
                      |+||+.|++||
T Consensus       389 p~GN~~g~~~Y  399 (424)
T 3nt8_A          389 PGGNYMGHVIY  399 (424)
T ss_dssp             SCCCCTTSBSS
T ss_pred             CCCCcCCCCCC
Confidence            99999999998

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A

Probab=99.97  E-value=3.6e-31  Score=194.11  Aligned_cols=113  Identities=17%  Similarity=0.198  Sum_probs=91.8

Q ss_pred             hHHHHHHHHHHHHHHhhcC------------CCCCccccHHHHHHHHHHHHhhhccCccccCCCCccceEEeecC---CC
Q 048151           26 NATQQRYVHLHNEARRNVG------------IGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWADY---DF   90 (164)
Q Consensus        26 ~~~~~~il~~hN~~R~~~~------------~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~~~gen~~~~~~---~~   90 (164)
                      ++.|+.||+.||.+|++++            |. +|+||++||..||.||+     |. .++. ..|||++..++   ..
T Consensus        16 ~~~~~~il~~HN~~R~~va~G~~~~~p~A~nM~-~l~Wd~eLa~~Aq~~A~-----C~-~~~~-~~GeNl~~~sg~~~~~   87 (206)
T 3s6s_A           16 RPFREAIDTFHNGLRQRIAKGEAEGYGPAREMY-GLVYDCGLEEEARKEIK-----LP-GYAD-LHHRGVTRFSGDYEGS   87 (206)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCSTTSCSCCCCB-CCEEEHHHHHHHHHHHH-----ST-THHH-HTTCEEEEEEEECSSC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCCCcchhhcC-cCCchHHHHHHHHHhhc-----CC-CCCC-CCCcEEEEecCCCCcc
Confidence            5789999999999999985            34 79999999999999997     55 2322 22999965442   22


Q ss_pred             CH--HHHHHHHHhccccCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeC----CC-CEEEEEEEecCCCCCCCCCC
Q 048151           91 TV--DHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCN----NN-HQFIAICNYDPPGNAAGERP  163 (164)
Q Consensus        91 ~~--~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~----~~-~~~~~vC~Y~p~gn~~g~~~  163 (164)
                      .+  .++|+.||+|               .++|||||||.++++||||++.|.    .+ ..++ ||+|+|+|  .|++|
T Consensus        88 ~~~~~~av~~W~~E---------------~~gHfTQmVW~~Tt~VGCa~~~C~~~~~~~~~~~v-VCnY~p~G--~g~~~  149 (206)
T 3s6s_A           88 AISALKEILETFSA---------------DKNSMRQVVYPKATRFGCSGRLRRNKKTGMRRMDW-VCVYDKKP--KDGES  149 (206)
T ss_dssp             HHHHHHHHHHHHTT---------------CHHHHHHHHCTTCCEEEEEEEECC-------EEEE-EEEESCCC--CTTCC
T ss_pred             chhHHHHHHHHHhh---------------hhhhHHHHHHHhhceeeEEEEEecCcCCCCceEEE-EEEeCCCC--CCCCC
Confidence            23  4899999999               389999999999999999999996    23 4566 99999998  89999


Q ss_pred             C
Q 048151          164 F  164 (164)
Q Consensus       164 Y  164 (164)
                      |
T Consensus       150 Y  150 (206)
T 3s6s_A          150 F  150 (206)
T ss_dssp             C
T ss_pred             c
Confidence            8

>4ifa_A Extracellular protein containing A SCP domain; vaccine candi virulence, pathogenesis, center for structural genomics of infectious diseases; HET: MSE; 1.50A {Bacillus anthracis}

Probab=99.67  E-value=2.2e-16  Score=123.54  Aligned_cols=93  Identities=20%  Similarity=0.282  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHHhhhccCccccCCC-----------------CccceEEeecCC
Q 048151           27 ATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS-----------------HYGENLAWADYD   89 (164)
Q Consensus        27 ~~~~~il~~hN~~R~~~~~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~-----------------~~gen~~~~~~~   89 (164)
                      .+++++|++||.+|.+++++ +|.||..|+..|+.||++|+..|.+.|.+.                 .+||||+.+.. 
T Consensus       219 a~e~~vl~lvN~~Ra~~Gl~-pL~~d~~L~~aAq~hA~dMa~~~~fsH~~~~G~~~~~R~~~~G~~~~~~GENIA~G~~-  296 (339)
T 4ifa_A          219 GNMQQIFDLTNIIRSRHNLP-LLAWDQQTADVAIGHSKDMKDNNYFSHDSPTLGTLGDRLQRGKVGFQLAGENIAAQHS-  296 (339)
T ss_dssp             HHHHHHHHHHHHHHHHTTCC-CCEECHHHHHHHHHHHHHHHHHTCCSSSBTTTBCHHHHHHHTTCCCSEEEEEEEESCS-
T ss_pred             HHHHHHHHHHHHHHHHcCCC-CCccCHHHHHHHHHHHHHHhhcCCeecCCCCCCCHHHHHHHcCCCcCceeEEEEEeCC-
Confidence            46789999999999999999 999999999999999999999999998642                 37999998753 


Q ss_pred             CCHHHHHHHHHhccccCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEE
Q 048151           90 FTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKE  138 (164)
Q Consensus        90 ~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~  138 (164)
                       ++..+++.|++.                .||+.+|+|+..+++|+|+.
T Consensus       297 -s~~~av~~WmnS----------------pGHr~NIL~~~~t~iGvGv~  328 (339)
T 4ifa_A          297 -DGVAALQGWLNS----------------EGHRKNLLNEQFTGLGVGVY  328 (339)
T ss_dssp             -SHHHHHHHHHTS----------------HHHHHHHTCTTCCEEEEEEE
T ss_pred             -CHHHHHHHHhCC----------------HhHHHHHhCCCCCEEEEEEE
Confidence             688999999863                79999999999999999997

>4h0a_A Uncharacterized protein; CAP protein family, cysteine-rich secretory proteins, struct genomics, joint center for structural genomics; 1.90A {Staphylococcus aureus subsp}

Probab=99.45  E-value=2.6e-13  Score=105.78  Aligned_cols=93  Identities=14%  Similarity=0.163  Sum_probs=76.5

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHHhhhccCccccCCC----------------CccceEEeecCCC
Q 048151           27 ATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS----------------HYGENLAWADYDF   90 (164)
Q Consensus        27 ~~~~~il~~hN~~R~~~~~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~----------------~~gen~~~~~~~~   90 (164)
                      ...++||++.|.+|..++++ +|.||..|+..|+.||.+|+......|++.                .+||||+.+..  
T Consensus       204 ~~e~~il~liN~~R~~~GL~-pL~~d~~L~~aA~~ha~dma~~~~~h~~~~g~~~~~R~~~~g~~~~~~gENIA~g~~--  280 (323)
T 4h0a_A          204 NQLISLYEVTNEMRKLKGLK-PLKINSDLAHIASNNLYEATSNGSDSVEFTEDALRGQLDKNHVTYKTTAQNVGYAFN--  280 (323)
T ss_dssp             HHHHHHHHHHHHHHHHTTCC-CCEECHHHHHHHHHHHHHHTC------CCCHHHHHHHHHHTTCCCSEEEEEEEESCC--
T ss_pred             HHHHHHHHHHHHHHHHcCCc-ccCccHhHHHHHHHHHHHHhhCCCCCcCCCCCCHHHHHHHcCCCcCeeeeEEecCCC--
Confidence            45678999999999999999 999999999999999999985443333321                46899998754  


Q ss_pred             CHHHHHHHHHhccccCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEE
Q 048151           91 TVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKE  138 (164)
Q Consensus        91 ~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~  138 (164)
                      ++..+++.|++.                .||..+|+.+..+++|+|+.
T Consensus       281 ~~~~vv~~WmnS----------------pgHR~NiL~~~~t~iGvGv~  312 (323)
T 4h0a_A          281 DVPTLIHSWMNS----------------DIHRSRLLNSKYDEMGGDVM  312 (323)
T ss_dssp             SHHHHHHHHHTS----------------HHHHHHHTCSSCCEEEEEEE
T ss_pred             CHHHHHHHHHcC----------------HHHHHHHcCCCCCEEEEEEE
Confidence            689999999864                68999999999999999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	164
d1cfea_	135	d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1	3e-31
d1rc9a1	164	d.111.1.1 (A:1-164) Cysteine-rich secretory protei	9e-31
d1smba_	149	d.111.1.1 (A:) Golgi-associated PR-1 protein {Huma	4e-27
d1qnxa_	209	d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jac	3e-26

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]} Length = 135

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

 Score =  107 bits (268), Expect = 3e-31
 Identities = 67/137 (48%), Positives = 84/137 (61%), Gaps = 4/137 (2%)

Query: 28  TQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWAD 87
           + Q Y+ +HN+AR  VG+G  M+WD  L   A +YA     DC + HS    GENLA   
Sbjct: 3   SPQDYLAVHNDARAQVGVGP-MSWDANLASRAQNYANSRAGDCNLIHS--GAGENLAKGG 59

Query: 88  YDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFI 147
            DFT    V++WV E+  Y+Y +N C   + C HYTQVVWR SVRLGC + RCNN   FI
Sbjct: 60  GDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFI 119

Query: 148 AICNYDPPGNAAGERPF 164
             CNYDP GN  G+RP+
Sbjct: 120 -SCNYDPVGNWIGQRPY 135

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]} Length = 164

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

 Score =  107 bits (267), Expect = 9e-31
 Identities = 46/151 (30%), Positives = 64/151 (42%), Gaps = 9/151 (5%)

Query: 20  HLSSANNATQQRYVHLHNEARRNVGIGIG----MTWDKTLEDHAHSYAQKLKVDCIIEHS 75
             S      Q   V LHN  RR+V         M W     D+A  +A +         S
Sbjct: 6   SESPRKPEIQNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAYRCIESHSSYES 65

Query: 76  VSH----YGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSV 131
                   GEN+  + Y      I+  W DE + + Y      PN + GHYTQ+VW KS 
Sbjct: 66  RVIEGIKCGENIYMSPYPMKWTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSY 125

Query: 132 RLGCAKERCNNN-HQFIAICNYDPPGNAAGE 161
           R+GCA   C ++ + +  +C Y P GN  G+
Sbjct: 126 RIGCAAAYCPSSPYSYFFVCQYCPAGNFIGK 156

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.3 bits (241), Expect = 4e-27
 Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 8/146 (5%)

Query: 23  SANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSH---- 78
           SA+       +  HNE R+  G+   +   K L   A  Y++ L    I++HS       
Sbjct: 1   SASKQFHNEVLKAHNEYRQKHGVP-PLKLCKNLNREAQQYSEALASTRILKHSPESSRGQ 59

Query: 79  YGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKE 138
            GENLAWA YD T   +   W  E + Y++           GH+T +VW+ + ++G  K 
Sbjct: 60  CGENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKA 117

Query: 139 RCNNNHQFIAICNYDPPGNAAGERPF 164
             ++   F+ +  Y P GN   E  F
Sbjct: 118 SASDGSSFV-VARYFPAGNVVNEGFF 142

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]} Length = 209

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

 Score = 96.5 bits (239), Expect = 3e-26
 Identities = 37/165 (22%), Positives = 63/165 (38%), Gaps = 25/165 (15%)

Query: 25  NNATQQRYVHLHNEARRNVGIGIG----------------MTWDKTLEDHAHSYAQKLKV 68
               +Q  +  HN+ R+ +  G+                 + W+  L   A  +A + + 
Sbjct: 42  TKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQY 101

Query: 69  DCIIEHSVSH--YGENLAWADY----DFTVDHIVKMWVDEKQFYDYNSNTCAPNQM-CGH 121
                  V+    G+N+A              +VKMW DE + Y+        + +  GH
Sbjct: 102 GHDTCRDVAKYQVGQNVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGH 161

Query: 122 YTQVVWRKSVRLGCAKERCNNN--HQFIAICNYDPPGNAAGERPF 164
           YTQ+VW  +  +GC   +      H+   +CNY P GN   E  +
Sbjct: 162 YTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEELY 206

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	164
d1cfea_	135	Pathogenesis-related protein 1 (PR1) {Tomato (Lyco	100.0
d1smba_	149	Golgi-associated PR-1 protein {Human (Homo sapiens	100.0
d1rc9a1	164	Cysteine-rich secretory protein (SteCRISP) {Chines	100.0
d1qnxa_	209	Insect allergen 5 (AG5) {Yellow jacket (Vespula vu	100.0

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

Probab=100.00  E-value=3.5e-45  Score=252.25  Aligned_cols=134  Identities=50%  Similarity=0.947  Sum_probs=123.8

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHHhhhccCccccCCCCccceEEeecCCCCHHHHHHHHHhccccC
Q 048151           27 ATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWADYDFTVDHIVKMWVDEKQFY  106 (164)
Q Consensus        27 ~~~~~il~~hN~~R~~~~~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~~~gen~~~~~~~~~~~~~v~~W~~e~~~y  106 (164)
                      ++++++|+.||.+|+.++++ +|+||++|++.||.||++++..|.+.|+  ..|||++...++..++++|+.||+|.+.|
T Consensus         2 ~~~q~~l~~HN~~R~~~~~~-~L~Wd~~La~~Aq~~A~~~~~~~~~~~~--~~GeNi~~~~~~~~~~~av~~W~~E~~~y   78 (135)
T d1cfea_           2 NSPQDYLAVHNDARAQVGVG-PMSWDANLASRAQNYANSRAGDCNLIHS--GAGENLAKGGGDFTGRAAVQLWVSERPSY   78 (135)
T ss_dssp             CSHHHHHHHHHHHHHHTTCC-CCEECSHHHHHHHHHHHHHTTTCCSCSC--SSSBCCEECSSSCCHHHHHHHHHTTGGGE
T ss_pred             CcHHHHHHHHHHHHHHcCCC-cCEECHHHHHHHHHHHHHHhhCCCcccC--ccccceeccCCCCCHHHHHHHHHhhcccc
Confidence            45788999999999999999 9999999999999999988877777665  46999998877888999999999999999


Q ss_pred             cCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCCCEEEEEEEecCCCCCCCCCCC
Q 048151          107 DYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF  164 (164)
Q Consensus       107 ~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~~~Y  164 (164)
                      ++..+.+.....++|||||||++|++||||++.|+++..++ ||+|+|+||+.|++||
T Consensus        79 ~~~~~~~~~~~~~ghftQmvW~~t~~vGCa~~~c~~~~~~v-VC~Y~P~GN~~g~~pY  135 (135)
T d1cfea_          79 NYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFI-SCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             EGGGTEECSSSCCSSHHHHHCTTCCEEEEEEEECTTSSEEE-EEECSSCCSCTTSCCC
T ss_pred             ccccccCCCCcccchhheeeehhheEeeEEEEEECCCCEEE-EEEEeCCCCcCCcCCC
Confidence            99988887777899999999999999999999999888888 9999999999999999

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-42  Score=242.82  Aligned_cols=137  Identities=29%  Similarity=0.585  Sum_probs=126.2

Q ss_pred             ccChHHHHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHHhhhccCccccCCC----CccceEEeecCCCCHHHHHHH
Q 048151           23 SANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS----HYGENLAWADYDFTVDHIVKM   98 (164)
Q Consensus        23 ~a~~~~~~~il~~hN~~R~~~~~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~----~~gen~~~~~~~~~~~~~v~~   98 (164)
                      ++ ++++++||+.||.+|++++++ +|+||++|++.||.||++|+++|.+.|++.    .+|||++++..+....++|+.
T Consensus         2 ~~-~~f~~~il~~HN~~R~~~g~~-pL~wd~~La~~A~~~A~~~a~~~~~~h~~~~~~~~~geni~~~~~~~~~~~~v~~   79 (149)
T d1smba_           2 AS-KQFHNEVLKAHNEYRQKHGVP-PLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYDQTGKEVADR   79 (149)
T ss_dssp             HH-HHHHHHHHHHHHHHHHHTTCC-CCEECHHHHHHHHHHHHHHHHHCCCCCCHHHHTTSSEEEEEEESSCCCHHHHHHH
T ss_pred             ch-HHHHHHHHHHHHHHHHHcCCC-cchhhHHHHHHHHHHHHhhcccccccccccccccccCceeeecCCCccHHHHHHH
Confidence            44 689999999999999999999 999999999999999999999999998653    689999988877789999999


Q ss_pred             HHhccccCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCCCEEEEEEEecCCCCCCCCCCC
Q 048151           99 WVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGERPF  164 (164)
Q Consensus        99 W~~e~~~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~~~~~~vC~Y~p~gn~~g~~~Y  164 (164)
                      |++|.+.|++..+.+.  ..++||+||||+++++||||++.|.++..++ ||+|+|+||+.|+.+|
T Consensus        80 W~~e~~~y~~~~~~~~--~~~ghftqmvw~~t~~vGCg~a~c~~~~~~~-VC~Y~p~GN~~~~~~y  142 (149)
T d1smba_          80 WYSEIKNYNFQQPGFT--SGTGHFTAMVWKNTKKMGVGKASASDGSSFV-VARYFPAGNVVNEGFF  142 (149)
T ss_dssp             HHGGGGGCCTTSCCCC--GGGHHHHHHHCTTCCEEEEEEEECTTSCEEE-EEEEESCCCCCSTTHH
T ss_pred             HHHHHhhcccCCCCcc--cccchhhheecCCceEeeEEEEEcCCCCEEE-EEEeeCCCCcCCcccc
Confidence            9999999999888775  4599999999999999999999998887888 9999999999999887

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

Probab=100.00  E-value=5.1e-39  Score=227.89  Aligned_cols=134  Identities=37%  Similarity=0.722  Sum_probs=119.1

Q ss_pred             hHHHHHHHHHHHHHHhhcCCC----CCccccHHHHHHHHHHHHhhhccCccccCCC--------CccceEEeecCCCCHH
Q 048151           26 NATQQRYVHLHNEARRNVGIG----IGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS--------HYGENLAWADYDFTVD   93 (164)
Q Consensus        26 ~~~~~~il~~hN~~R~~~~~~----~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~--------~~gen~~~~~~~~~~~   93 (164)
                      +++|++||+.||.+|++++.+    .+|+||.+|++.||.||+    +|...|+..        ..|||++.......+.
T Consensus        12 ~~~~~~il~~HN~~R~~~~~~a~~m~~L~Wd~~La~~A~~~a~----~c~~~~~~~~~~~~~~~~~g~n~~~~~~~~~~~   87 (164)
T d1rc9a1          12 PEIQNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAY----RCIESHSSYESRVIEGIKCGENIYMSPYPMKWT   87 (164)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHT----TTCCSCCCGGGGEETTEECEEEEEEESSCCCHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcccccccccCHHHHHHHHHHHH----HHhhccCCcccccccccccceEEEEecCCCCHH
Confidence            578999999999999999855    149999999999999999    888776542        6889998877777899


Q ss_pred             HHHHHHHhccccCcCCCCCCCCCCcchHHHHHHHHcCCeeeEEEEEeCCC--CEEEEEEEecCCCCCCCC--CCC
Q 048151           94 HIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNN--HQFIAICNYDPPGNAAGE--RPF  164 (164)
Q Consensus        94 ~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~qmvw~~~~~vGCa~~~c~~~--~~~~~vC~Y~p~gn~~g~--~~Y  164 (164)
                      ++|+.||+|...|++....+..+..++||+||||+++++||||++.|.++  ..|+ ||+|+|+||+.|+  +||
T Consensus        88 ~~v~~W~~E~~~~~~~~~~~~~~~~~ghftqmvW~~t~~vGCa~~~c~~~~~~~~v-VC~Y~P~GN~~g~~~~~Y  161 (164)
T d1rc9a1          88 DIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYRIGCAAAYCPSSPYSYFF-VCQYCPAGNFIGKTATPY  161 (164)
T ss_dssp             HHHHHHHGGGGGEETTTEESSTTCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEE-EEEEESCCCCTTCTTCSS
T ss_pred             HHHHHHhhhhheeecCCCCCCCcchhhHHHHHhhhcccEEeEEEEEeCCCCceEEE-EEEEcCCCccCCCcCCCc
Confidence            99999999999999988877777789999999999999999999999776  5677 9999999999997  567

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

Probab=100.00  E-value=5e-37  Score=225.25  Aligned_cols=133  Identities=27%  Similarity=0.565  Sum_probs=113.3

Q ss_pred             hHHHHHHHHHHHHHHhhcC-----------------CCCCccccHHHHHHHHHHHHhhhccCccccCCC------Cccce
Q 048151           26 NATQQRYVHLHNEARRNVG-----------------IGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS------HYGEN   82 (164)
Q Consensus        26 ~~~~~~il~~hN~~R~~~~-----------------~~~~L~Wd~~La~~A~~~a~~~~~~C~~~~~~~------~~gen   82 (164)
                      ++.|+.||+.||.+|++++                 |. +|+||++||..||.||+    +|...|+..      .+|||
T Consensus        43 ~~~r~~iL~~HN~~R~~vA~G~~~~~~~~~~P~A~~M~-~L~Wd~eLa~~A~~~a~----~C~~~~~~~~~~~~~~~Gen  117 (209)
T d1qnxa_          43 KQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMK-NLVWNDELAYVAQVWAN----QCQYGHDTCRDVAKYQVGQN  117 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCC-CCEECHHHHHHHHHHHT----TCCCSCCSCCCCSSSCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhcccccccccCCCCccccCc-cceECHHHHHHHHHHHh----hcccCCCcccCCCCCCCcce
Confidence            5789999999999999874                 34 79999999999999999    898877542      57999


Q ss_pred             EEeecC----CCCHHHHHHHHHhccccCcCCCCCCCC-CCcchHHHHHHHHcCCeeeEEEEEeCCC---CEEEEEEEecC
Q 048151           83 LAWADY----DFTVDHIVKMWVDEKQFYDYNSNTCAP-NQMCGHYTQVVWRKSVRLGCAKERCNNN---HQFIAICNYDP  154 (164)
Q Consensus        83 ~~~~~~----~~~~~~~v~~W~~e~~~y~~~~~~~~~-~~~~~~f~qmvw~~~~~vGCa~~~c~~~---~~~~~vC~Y~p  154 (164)
                      ++....    ...+.++|+.|++|...|++....... +..++||+||||+++++||||++.|..+   ..++ ||+|+|
T Consensus       118 ~~~~~~~~~~~~~~~~~v~~W~~E~~~~~~~~~~~~~~~~~~ghftQmvw~~t~~VGCa~~~c~~~~~~~~~v-VC~Y~p  196 (209)
T d1qnxa_         118 VALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYL-VCNYGP  196 (209)
T ss_dssp             EEEEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEE-EEEEES
T ss_pred             eeecccCCcCcccHHHHHHHHHHHhhhcCCCcccccCCccccchhHHHhhhhhCEEeEEEEEEcCCCCCEEEE-EEEECC
Confidence            977541    247889999999999999987765443 3469999999999999999999999765   3566 999999


Q ss_pred             CCCCCCCCCC
Q 048151          155 PGNAAGERPF  164 (164)
Q Consensus       155 ~gn~~g~~~Y  164 (164)
                      +||+.|++||
T Consensus       197 ~GN~~g~~~Y  206 (209)
T d1qnxa_         197 SGNFKNEELY  206 (209)
T ss_dssp             CCCCTTSCSS
T ss_pred             CCCCCCCCCC
Confidence            9999999999