Citrus Sinensis ID: 048157

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980--
MGVMDSLLQTESARVVSLPNGSHSDGRLGKAPMENGHCASQGGPKHKRRKISAVRDFPPGCGPSASRINWIPNEEAIVGVLRPDAENVVVSSNHVDMLDLVSADPNGTLLLDTENVNTSGGKMYDGSKNLNMMHIGVSDEEMVLQSGSKALSSPNSRNAVPHLSNLERILTRNYPPRRRVSAIRDFPPFCGQNASVLGKEECMEAHPSFRSSPQEESDSKGKPLKETVKTDENQIRVNGYDGDVCMNEFGGDVSKITSGKVLADFEEHATMETKNRDGFATSSKKMMTVAQEDTGEMSVVCPHATKRYRFDGKTGALIKSNERDVGVLEENPVRDIVVYGEHKQLDGTRSDFSVSDNQFQEEDSEGLQLALNRVIVQGLMASLNCPWRWEKGVCKPNYVSGTGQRERKKHNSLPPSKSPSEEIIKAKGSEGSYCKRNSYSGRNAYENRSALVMRDGKDSLGHDRGQENFHLGQRSHVFDVTLPPHPRSSSGKGPENDAIGARNKVRETLRLFQAVCRKLLHEEEAKPSRQNSHKRVDYLAARILKDKKKYIPVDKKVIGSVPGVEVGDEFQYRVELNMIGLHLQIQGGIDYVKHKGKILATSIVASGGYDDNLDNSDVLIYTGQGGNVMNGGKEPEDQKLERGNLALANSIHEQNPRYWQDVGSHGKLVFKFKLARIPGQPELSWKVVKKCKKSKVREGLCVDDISQGKELIPICAVNTVDDEKPPSFKYITNIIYPDWCRPVPPKGCDCTNGCSELGKCACVAKNGGELPYNHNGAIVQAKPLVYECGPSCKCPPSCYNRVSQQGIKFQLEIFKTEARGWGVRSLNSIPSGSFICEYAGELLEEKEAERRTSNDEYLFDIGNNYNDGSLWGGLSNVMPDAPSSSCGVVEDGGFTIDAVEYGNVGRFVNHSCSPNLYAQNVLYDHEDKRMPHIMLFAAENIPPLQELTYHYNYVIDQVYDSSGNIKKKSCFCGSSECTGRLY
cccccccHHcccccEEEccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccEEEcccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccccccccccEEccccccccccEEEEEEEEEEEEEccccccccEEEccccEEEEEEEEEcccccccccccccEEEEccccccccccccccccccccccHHHHHHHcccccccEEEcccccEEEEEEEccccccccccHHHHHHHHccccccccccHHccccccccccEEEEEccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccEEccccEEEEccccccccccccccccccccEEcEEEEEEccccEEEEEccccccccEEEEEEEEEEcHHHHHHHccccccEEccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccEEEEEEEccccccccEEEEEEcccccccccccccccccccccccccccccccEEEccccccccccc
cccHHHcccHHHEEEEEccccccccccccEEEcccccccccccccccEEEEcEcccccccccccEEEEccccccEEEEEEccccccccEEcccccccccccccccccEEEEccccccccHccEEccccccHHccccccccEEEcccccEEcccccccccccccEccccccccccccccEEEEEccccccccccccccccHHHccccccHcccccHccccccccccccEEccccccccccccccccHHHHcccccccccccccHHHcccccccccccccEEEcccEEEEEEEccccccEEEccccccccccccccccEccccccccEEEEccccccEEEcccccccccccccccEEcccEccccccccccccccHEEHHHcccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccEEEEcccccccccccccccEccccccEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccEEccccEEEccccccEEccEEEEEEEEEEEEccccHcccccEccccccEEEEEEEEccccccccccccEEEEEccccccccccccHHHcHHccccHHHHHHHccccccHEEEccccccEEEEEEEEEcccccHHHHHHHHHHHccccccccEcHcHHcccccccEEEEEccccccccccEEEEEEccccccccccccccccccccccccccccHHHcccccccccccEEEccccEEEccccccccccccccccHHHcccccEEEEEcccccEEEEEcccEccccEEEEcccEEEEHHHHHHHHccccEEEEcccccccHccccccHHcccccccccccccccccEEEEcccEEcHHHHcEEcccccEEEEEEEcccccccccEEEEEEcccEccccEcEEcccccccccccccccEEEEEEEccccccccccc
MGVMDSLLQTESArvvslpngshsdgrlgkapmenghcasqggpkhkrrkisavrdfppgcgpsasrinwipneeaivgvlrpdaenvvvssnhvdmldlvsadpngtllldtenvntsggkmydgsknlnmmhigvsdEEMVLQSGskalsspnsrnavphlsnleriltrnypprrrvsairdfppfcgqnasvlgkeecmeahpsfrsspqeesdskgkplketvktdenqirvngydgdvcmnefggdvskitsgkvladfeehatmetknrdgfatSSKKMMTVAQEdtgemsvvcphatkryrfdgktgaliksnerdvgvleenpvrdIVVYgehkqldgtrsdfsvsdnqfqeeDSEGLQLALNRVIVQGLMAslncpwrwekgvckpnyvsgtgqrerkkhnslppskspseEIIKAkgsegsyckrnsysgrnayeNRSALVMrdgkdslghdrgqenfhlgqrshvfdvtlpphprsssgkgpendaigARNKVRETLRLFQAVCRKLLHeeeakpsrqnshKRVDYLAARILKDkkkyipvdkkvigsvpgvevgdEFQYRVELNMIGLHLQIQGGIDYVKHKGKILATSIVasggyddnldnsdvliytgqggnvmnggkepedqklerGNLALANSiheqnprywqdvgshgkLVFKFKlaripgqpelswKVVKKCKkskvreglcvddisqgkelipicavntvddekppsfkyitniiypdwcrpvppkgcdctngcselgkcacvaknggelpynhngaivqakplvyecgpsckcppscynrvsQQGIKFQLEIFKTeargwgvrslnsipsgsFICEYAGELLEEKEaerrtsndeylfdignnyndgslwgglsnvmpdapssscgvvedggftidaveygnvgrfvnhscspnlyaqnvlydhedkrmphIMLFaaenipplqeltyhYNYVIDQvydssgnikkkscfcgssectgrly
MGVMDSLLQTESArvvslpngshsdgrlgkapmenghcasqggpkhkrrkiSAVRdfppgcgpsasrinwiPNEEAIVGVLRPDAENVVVSSNHVDMLDLVSADPNGTLLLDTENVNTSGGKMYDGSKNLNMMHIGVSDEEMVLQSGSKAlsspnsrnavphlsnleriltrnyPPRRRVSAIRDFPPFCGQNASVLGKEECMEAHpsfrsspqeesdskgkplketvktdenqirvngydgdVCMNEFGGDVSKITSGKVLADFEehatmetknrdgfatssKKMMTVAQEdtgemsvvcphatkryrfdgktgaliksnerdvgvleenpVRDIVVYGEHKQLDGTRSDFSVSDNQFQEEDSEGLQLALNRVIVQGLMASLNCPWRWEKGVCKPNyvsgtgqrerkkhnslppskspseeiikakgsegsyckrnsysgrnayeNRSALVMRDGKDSLGHDRGQENFHLGQRSHVFDVTLPPhprsssgkgpendaIGARNKVRETLRLFQAVCRKLLheeeakpsrqnshkrvDYLAARilkdkkkyipvdkkvigsvpgvevGDEFQYRVELNMIGLHLQIQGGIDYVKHKGKILATSIVASGGYDDNLDNSDVLIYTGQGGNVMNGGKEPEDQKLERGNLALANSIHEQNPRYWQDVGSHGKLVFKFKLaripgqpelswkvvkkckkskvreglcvddisqgkelipicavntvddekppSFKYITNIIYPDWCRPVPPKGCDCTNGCSELGKCACVAKNGGELPYNHNGAIVQAKPLVYECGPSCKCPPSCYNRVSQQGIKFQLEIFKTEARGWGVRSLNSIPSGSFICEYAGELLEEKEAERRTSNDEYLFDIGNNYNDGSLWGGLSNVMPDAPSSSCGVVEDGGFTIDAVEYGNVGRFVNHSCSPNLYAQNVLYDHEDKRMPHIMLFAAENIPPLQELTYHYNYVIDQVYDssgnikkkscfcgssectgrly
MGVMDSLLQTESARVVSLPNGSHSDGRLGKAPMENGHCASQGGPKHKRRKISAVRDFPPGCGPSASRINWIPNEEAIVGVLRPDAENVVVSSNHVDMLDLVSADPNGTLLLDTENVNTSGGKMYDGSKNLNMMHIGVSDEEMVLQSGSKALSSPNSRNAVPHLSNLERILTRNYPPRRRVSAIRDFPPFCGQNASVLGKEECMEAHPSFRSSPQEESDSKGKPLKETVKTDENQIRVNGYDGDVCMNEFGGDVSKITSGKVLADFEEHATMETKNRDGFATSSKKMMTVAQEDTGEMSVVCPHATKRYRFDGKTGALIKSNERDVGVLEENPVRDIVVYGEHKQLDGTRSDFSVSDNQFQEEDSEGLQLALNRVIVQGLMASLNCPWRWEKGVCKPNYVSGTGQRERKKHNSLPPSKSPSEEIIKAKGSEGSYCKRNSYSGRNAYENRSALVMRDGKDSLGHDRGQENFHLGQRSHVFDVTLPPHPRSSSGKGPENDAIGARNKVRETLRLFQAVCRKLLHEEEAKPSRQNSHKRVDYLAARILkdkkkyipvdkkviGSVPGVEVGDEFQYRVELNMIGLHLQIQGGIDYVKHKGKILATSIVASGGYDDNLDNSDVLIYTGQGGNVMNGGKEPEDQKLERGNLALANSIHEQNPRYWQDVGSHGKLVFKFKLARIPGQPELSWkvvkkckkskvREGLCVDDISQGKELIPICAVNTVDDEKPPSFKYITNIIYPDWCRPVPPKGCDCTNGCSELGKCACVAKNGGELPYNHNGAIVQAKPLVYECGPSCKCPPSCYNRVSQQGIKFQLEIFKTEARGWGVRSLNSIPSGSFICEYAGELLEEKEAERRTSNDEYLFDIGNNYNDGSLWGGLSNVMPDAPSSSCGVVEDGGFTIDAVEYGNVGRFVNHSCSPNLYAQNVLYDHEDKRMPHIMLFAAENIPPLQELTYHYNYVIDQVYDSSGNIKKKSCFCGSSECTGRLY
*****************************************************************SRINWIPNEEAIVGVLRPDAENVVVSSNHVDMLDLVSADPNGTLLLDT*******************************************************ILTR*Y****RVSAIRDFPPFCGQN*****************************************IRVNGYDGDVCMNEFGGDVSKITSGKVLAD**********************************VVCPHATKRYRFDGKTGALIKSNERDVGVLEENPVRDIVVYGEH************************LQLALNRVIVQGLMASLNCPWRWEKGVCKPNYV*********************************************************************************************************VRETLRLFQAVCRKLL***************VDYLAARILKDKKKYIPVDKKVIGSVPGVEVGDEFQYRVELNMIGLHLQIQGGIDYVKHKGKILATSIVASGGYDDNLDNSDVLIYTGQG************************SIHEQNPRYWQDVGSHGKLVFKFKLARIPGQPELSWKVVKKCKKSKVREGLCVDDISQGKELIPICAVNTVDDEKPPSFKYITNIIYPDWCRPVPPKGCDCTNGCSELGKCACVAKNGGELPYNHNGAIVQAKPLVYECGPSCKCPPSCYNRVSQQGIKFQLEIFKTEARGWGVRSLNSIPSGSFICEYAGELLE**********DEYLFDIGNNYNDGSLWGGLSNVMPDAPSSSCGVVEDGGFTIDAVEYGNVGRFVNHSCSPNLYAQNVLYDHEDKRMPHIMLFAAENIPPLQELTYHYNYVIDQVYDSSGNIKKKSCFCG*********
********************************************************************************************************************************************************************************RRRVSAIRDFPPFCGQNASV******************************************************************************************************************************************************************************************************************************************************************************************************************NKVRETLRLFQAVCRKLL******************LAARILKDKKKYIPVDKKVIGSVPGVEVGDEFQYRVELNMIGLHLQIQGGIDYVKHKGKILATSIVASGGYDDNLDNSDVLIYTGQGG*************LERGNLALANSIHEQNPRYWQDVGSHGKLVFKFKLARIPGQPELSWKVVKKCKKSKVREGLCVDDISQGKELIPICAVNTVDDEKPPSFKYITNIIYPDWCRPVPPKGCDCTNGCSELGKCACVAKNGGELPYNHNGAIVQAKPLVYECGPSCKCPPSCYNRVSQQGIKFQLEIFKTEARGWGVRSLNSIPSGSFICEYAGELLEEKEAERRTSNDEYLFDIGNNYNDGSLWGGLSNVMPDAPSSSCGVVEDGGFTIDAVEYGNVGRFVNHSCSPNLYAQNVLYDHEDKRMPHIMLFAAENIPPLQELTYHYNYVIDQVYD*SGNIKKKSCFCGSSECTGRLY
MGVMDSLLQTESARVVSLPNGSHSDGRLGKAPMENGHC***********KISAVRDFPPGCGPSASRINWIPNEEAIVGVLRPDAENVVVSSNHVDMLDLVSADPNGTLLLDTENVNTSGGKMYDGSKNLNMMHIGVSDEEMVLQSGSKALSSPNSRNAVPHLSNLERILTRNYPPRRRVSAIRDFPPFCGQNASVLGKEEC**********************KETVKTDENQIRVNGYDGDVCMNEFGGDVSKITSGKVLADFEEHATMETKNRDGFATSSKKMMTVAQEDTGEMSVVCPHATKRYRFDGKTGALIKSNERDVGVLEENPVRDIVVYGEHKQLDGTRSDFSV**********EGLQLALNRVIVQGLMASLNCPWRWEKGVCKPNYVSG********************EIIKAKGSEGSYCKRNSYSGRNAYENRSALVMRDGKDSLGHDRGQENFHLGQRSHVFDVTLPP*************AIGARNKVRETLRLFQAVCRKLLHEE**********KRVDYLAARILKDKKKYIPVDKKVIGSVPGVEVGDEFQYRVELNMIGLHLQIQGGIDYVKHKGKILATSIVASGGYDDNLDNSDVLIYTGQGGNVMNGGKEPEDQKLERGNLALANSIHEQNPRYWQDVGSHGKLVFKFKLARIPGQPELSWKVVKKCKKSKVREGLCVDDISQGKELIPICAVNTVDDEKPPSFKYITNIIYPDWCRPVPPKGCDCTNGCSELGKCACVAKNGGELPYNHNGAIVQAKPLVYECGPSCKCPPSCYNRVSQQGIKFQLEIFKTEARGWGVRSLNSIPSGSFICEYAGELLEEKEAERRTSNDEYLFDIGNNYNDGSLWGGLSNVMPDAPSSSCGVVEDGGFTIDAVEYGNVGRFVNHSCSPNLYAQNVLYDHEDKRMPHIMLFAAENIPPLQELTYHYNYVIDQVYDSSGNIKKKSCFCGS********
*****SLLQTESARVVSLPNG*****RLGKAPMENGHCASQGGPKHKRRKISAVRDFPPGCGPSASRINWIPNEEAIVGVLRPDAENVVVSSNHVDMLDLVSADPNGTLLLDTENVNTSGGKMYDGSKNLNMMHIGVSDEEMVLQSGSKALS*******VPHLSNLERILTRNYPPRRRVSAIRDFPPFCGQNAS***K********************************************************************HATMETKNRDGFATSSKKMMTVAQEDTGEMSVVCPH************A******RDVGVLEENPVRDIVVYGEHKQLDGTRSDFSVSDNQFQEEDSEGLQLALNRVIVQGLMASLNCPWR********************************************************************KDSLGHDRGQENFHLGQRSHVFDVTLPPH*************IGARNKVRETLRLFQAVCRKLLHEEEAKPS**NSHKRVDYLAARILKDKKKYIPVDKKVIGSVPGVEVGDEFQYRVELNMIGLHLQIQGGIDYVKHKGKILATSIVASGGYDDNLDNSDVLIYTGQGGNVMNGGKEPEDQKLERGNLALANSIHEQNPRYWQDVGSHGKLVFKFKLARIPGQPELSWKVVKKCKKSKVREGLCVDDISQGKELIPICAVNTVDDEKPPSFKYITNIIYPDWCRPVPPKGCDCTNGCSELGKCACVAKNGGELPYNHNGAIVQAKPLVYECGPSCKCPPSCYNRVSQQGIKFQLEIFKTEARGWGVRSLNSIPSGSFICEYAGELLEEKEAERRTSNDEYLFDIGNNYNDGSLWGGLSNVMP*APSSSCGVVEDGGFTIDAVEYGNVGRFVNHSCSPNLYAQNVLYDHEDKRMPHIMLFAAENIPPLQELTYHYNYVIDQVYDSSGNIKKKSCFCGSSECT*RLY
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MGVMDSLLQTESARVVSLPNGSHSDGRLGKAPMENGHCASQGGPKHKRRKISAVRDFPPGCGPSASRINWIPNEEAIVGVLRPDAENVVVSSNHVDMLDLVSADPNGTLLLDTENVNTSGGKMYDGSKNLNMMHIGVSDEEMVLQSGSKALSSPNSRNAVPHLSNLERILTRNYPPRRRVSAIRDFPPFCGQNASVLGKEECMEAHPSFRSSPQEESDSKGKPLKETVKTDENQIRVNGYDGDVCMNEFGGDVSKITSGKVLADFEEHATMETKNRDGFATSSKKMMTVAQEDTGEMSVVCPHATKRYRFDGKTGALIKSNERDVGVLEENPVRDIVVYGEHKQLDGTRSDFSVSDNQFQEEDSEGLQLALNRVIVQGLMASLNCPWRWEKGVCKPNYVSGTGQRERKKHNSLPPSKSPSEEIIKAKGSEGSYCKRNSYSGRNAYENRSALVMRDGKDSLGHDRGQENFHLGQRSHVFDVTLPPHPRSSSGKGPENDAIGARNKVRETLRLFQAVCRKLLHEEEAKPSRQNSHKRVDYLAARILKDKKKYIPVDKKVIGSVPGVEVGDEFQYRVELNMIGLHLQIQGGIDYVKHKGKILATSIVASGGYDDNLDNSDVLIYTGQGGNVMNGGKEPEDQKLERGNLALANSIHEQNPRYWQDVGSHGKLVFKFKLARIPGQPELSWKVVKKCKKSKVREGLCVDDISQGKELIPICAVNTVDDEKPPSFKYITNIIYPDWCRPVPPKGCDCTNGCSELGKCACVAKNGGELPYNHNGAIVQAKPLVYECGPSCKCPPSCYNRVSQQGIKFQLEIFKTEARGWGVRSLNSIPSGSFICEYAGELLEEKEAERRTSNDEYLFDIGNNYNDGSLWGGLSNVMPDAPSSSCGVVEDGGFTIDAVEYGNVGRFVNHSCSPNLYAQNVLYDHEDKRMPHIMLFAAENIPPLQELTYHYNYVIDQVYDSSGNIKKKSCFCGSSECTGRLY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query982 2.2.26 [Sep-21-2011]
Q8VZ17790 Histone-lysine N-methyltr yes no 0.487 0.606 0.623 0.0
O82175794 Histone-lysine N-methyltr no no 0.477 0.590 0.590 1e-179
Q9FF80670 Histone-lysine N-methyltr no no 0.481 0.705 0.395 3e-90
Q9T0G7650 Probable histone-lysine N no no 0.477 0.721 0.370 9e-89
Q8GZB6624 Histone-lysine N-methyltr no no 0.476 0.75 0.372 8e-88
Q9C5P4669 Histone-lysine N-methyltr no no 0.472 0.693 0.377 1e-86
Q93YF5704 Histone-lysine N-methyltr N/A no 0.470 0.656 0.383 1e-81
O22781651 Histone-lysine N-methyltr no no 0.426 0.643 0.375 3e-80
Q9C5P1693 Histone-lysine N-methyltr no no 0.425 0.603 0.354 7e-67
Q9C5P0755 Histone-lysine N-methyltr no no 0.460 0.598 0.335 2e-61
>sp|Q8VZ17|SUVH6_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 OS=Arabidopsis thaliana GN=SUVH6 PE=2 SV=2 Back     alignment and function desciption
 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/523 (62%), Positives = 369/523 (70%), Gaps = 44/523 (8%)

Query: 502 RNKVRETLRLFQAVCRKLLHEEEAKPS---RQNSHKRVDYLAARILKDKKKYIPVDKKVI 558
           RNKV+ETLRLF  VCRK+L E+EAKP    R+    R+D+ A+ ILK   K++     ++
Sbjct: 270 RNKVKETLRLFHGVCRKILQEDEAKPEDQRRKGKGLRIDFEASTILKRNGKFLNSGVHIL 329

Query: 559 GSVPGVEVGDEFQYRVELNMIGLHLQIQGGIDYVKHKGKILATSIVASGGYDDNLDNSDV 618
           G VPGVEVGDEFQYR+ELN++G+H   Q GIDY+K+    +ATSIVASGGYDD+LDNSDV
Sbjct: 330 GEVPGVEVGDEFQYRMELNILGIHKPSQAGIDYMKYGKAKVATSIVASGGYDDHLDNSDV 389

Query: 619 LIYTGQGGNVMNGGK------EPEDQKLERGNLALANSIHEQNP---------------- 656
           L YTGQGGNVM   K      EPEDQKL  GNLALA SI +Q P                
Sbjct: 390 LTYTGQGGNVMQVKKKGEELKEPEDQKLITGNLALATSIEKQTPVRVIRGKHKSTHDKSK 449

Query: 657 -------------RYWQDVGSHGKLVFKFKLARIPGQPELSWKVVKKCKKSKVREGLCVD 703
                        +YWQ VGSHG  VFKF+L RIPGQPELSW  VKK  KSK REGLC  
Sbjct: 450 GGNYVYDGLYLVEKYWQQVGSHGMNVFKFQLRRIPGQPELSWVEVKK-SKSKYREGLCKL 508

Query: 704 DISQGKELIPICAVNTVDDEKPPSFKYITNIIYPDWCRPVPPKGCDCTNGCSELGK--CA 761
           DIS+GKE  PI AVN +DDEKPP F Y   +IYPDWCRPVPPK C CT  C+E     CA
Sbjct: 509 DISEGKEQSPISAVNEIDDEKPPLFTYTVKLIYPDWCRPVPPKSCCCTTRCTEAEARVCA 568

Query: 762 CVAKNGGELPYNHNGAIVQAKPLVYECGPSCKCPPSCYNRVSQQGIKFQLEIFKTEARGW 821
           CV KNGGE+PYN +GAIV AKP +YECGP CKCP SCY RV+Q GIK  LEIFKT++RGW
Sbjct: 569 CVEKNGGEIPYNFDGAIVGAKPTIYECGPLCKCPSSCYLRVTQHGIKLPLEIFKTKSRGW 628

Query: 822 GVRSLNSIPSGSFICEYAGELLEEKEAERRTSNDEYLFDIGNNYNDGSLWGGLSNVM--P 879
           GVR L SIP GSFICEY GELLE+ EAERR  NDEYLFDIGN Y D SL  G+S +M   
Sbjct: 629 GVRCLKSIPIGSFICEYVGELLEDSEAERRIGNDEYLFDIGNRY-DNSLAQGMSELMLGT 687

Query: 880 DAPSSSCGVVEDGGFTIDAVEYGNVGRFVNHSCSPNLYAQNVLYDHEDKRMPHIMLFAAE 939
            A  S     E  GFTIDA   GNVGRF+NHSCSPNLYAQNVLYDHED R+PH+M FA +
Sbjct: 688 QAGRSMAEGDESSGFTIDAASKGNVGRFINHSCSPNLYAQNVLYDHEDSRIPHVMFFAQD 747

Query: 940 NIPPLQELTYHYNYVIDQVYDSSGNIKKKSCFCGSSECTGRLY 982
           NIPPLQEL Y YNY +DQV DS GNIK+K CFCG++ C  RLY
Sbjct: 748 NIPPLQELCYDYNYALDQVRDSKGNIKQKPCFCGAAVCRRRLY 790
Histone methyltransferase. Methylates 'Lys-9' of histone H3. H3 'Lys-9' methylation represents a specific tag for epigenetic transcriptional repression. Seems to act preferentially on dsMRNA.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 3
>sp|O82175|SUVH5_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 OS=Arabidopsis thaliana GN=SUVH5 PE=1 SV=1 Back     alignment and function description
>sp|Q9FF80|SUVH1_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 OS=Arabidopsis thaliana GN=SUVH1 PE=2 SV=1 Back     alignment and function description
>sp|Q9T0G7|SUVH9_ARATH Probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9 OS=Arabidopsis thaliana GN=SUVH9 PE=2 SV=1 Back     alignment and function description
>sp|Q8GZB6|SUVH4_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 OS=Arabidopsis thaliana GN=SUVH4 PE=1 SV=2 Back     alignment and function description
>sp|Q9C5P4|SUVH3_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 OS=Arabidopsis thaliana GN=SUVH3 PE=2 SV=2 Back     alignment and function description
>sp|Q93YF5|SUVH1_TOBAC Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 OS=Nicotiana tabacum GN=SUVH1 PE=1 SV=1 Back     alignment and function description
>sp|O22781|SUVH2_ARATH Histone-lysine N-methyltransferase, H3 lysine-9, H3 lysine-27, H4 lysine-20 and cytosine specific SUVH2 OS=Arabidopsis thaliana GN=SUVH2 PE=1 SV=1 Back     alignment and function description
>sp|Q9C5P1|SUVH7_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 OS=Arabidopsis thaliana GN=SUVH7 PE=2 SV=1 Back     alignment and function description
>sp|Q9C5P0|SUVH8_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH8 OS=Arabidopsis thaliana GN=SUVH8 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query982
147799414 1126 hypothetical protein VITISV_038835 [Viti 0.978 0.853 0.505 0.0
359496368 1109 PREDICTED: uncharacterized protein LOC10 0.960 0.850 0.502 0.0
449459056992 PREDICTED: histone-lysine N-methyltransf 0.926 0.917 0.484 0.0
356540561 1086 PREDICTED: uncharacterized protein LOC10 0.851 0.769 0.489 0.0
357482201 1091 Histone-lysine N-methyltransferase, H3 l 0.816 0.735 0.491 0.0
224126633513 SET domain protein [Populus trichocarpa] 0.490 0.939 0.721 0.0
356497095561 PREDICTED: histone-lysine N-methyltransf 0.540 0.946 0.669 0.0
255580797455 histone-lysine n-methyltransferase, suvh 0.431 0.931 0.757 0.0
297825147808 predicted protein [Arabidopsis lyrata su 0.599 0.728 0.529 0.0
30681803790 histone-lysine N-methyltransferase, H3 l 0.487 0.606 0.623 0.0
>gi|147799414|emb|CAN76871.1| hypothetical protein VITISV_038835 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  968 bits (2502), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 562/1111 (50%), Positives = 680/1111 (61%), Gaps = 150/1111 (13%)

Query: 1    MGVMDSLLQTESARVVSLPNGSHSDGRLGKAPMENGHCASQGGPKHKRRKISAVRDFPPG 60
            MGV++++   E  R V + NG +S+GR  +  +ENG C S    ++KRRK+SA+RDFPPG
Sbjct: 37   MGVVENMQHKELLRAVPIVNGGYSEGRSERRSLENGDC-SVVTTRYKRRKVSAIRDFPPG 95

Query: 61   CGPSASRI-------------------------------------NWIPNEEA-IVGVLR 82
            CGP A R+                                     +  P E A  +    
Sbjct: 96   CGPLARRMPKEAFVCVGXSEKLDGGGKSEDALEVDGVNVPGTAVESKSPKELANSILTEM 155

Query: 83   PDAEN--------VVVSSNHVDMLDLVSADPNGT--LLLDTENVNTSGGKMYDGSKNLNM 132
            PD  N         V+SS+    ++L+  +P  T  L+ D            + S+ L  
Sbjct: 156  PDTSNELHSXVQMTVMSSDLAHGIELMHNEPEKTESLMSDARVFEPIKSLEQEASQILKD 215

Query: 133  MHIGVSDEEMVLQSGSKALSSPNSRNAVPHLSNLERILTRNYPPRRRVSAIRDFPPFCGQ 192
             H     EEM      K  S PN     P  S LE+ +T+ YPPRR++SAIRDFPPFCG+
Sbjct: 216  FH---EVEEMPPPGSVKVSSPPNGPMNAP--SVLEKTVTKKYPPRRKISAIRDFPPFCGR 270

Query: 193  NASVLGKEECMEAHPSFRSSP-------------------------------------QE 215
            NA  L +EEC++A    + +P                                     QE
Sbjct: 271  NAPRLSEEECLKAPAPSKGAPAPSKGAPAPSKGAPAPSKGTPAPSEGAPAPSKGKTVGQE 330

Query: 216  ESDSKGKPLKETVKTDENQIRVNGYDGDVCMNEFGGDVSKITSGKVLADFEEHATMETKN 275
            ES  K KPL E V  D  Q+  +  D DV   +   +VSK +  KV  +F+  A  E K 
Sbjct: 331  ESGVKEKPLTEPVSIDGKQMGEDVQDRDVLKEKLRANVSKNSRDKVQDEFKGSANKELKK 390

Query: 276  RDGFATSSKKMMTVAQEDTGEMSVVCPHATKRYRFDGKTGALIKSNERDVGVLEENPVRD 335
            +     SS+  M    E   E S+  P      R D K+  + K+NE    VLE    ++
Sbjct: 391  QVTLVISSEVKMEF--EVKREQSIGSPRENNLPRPDQKSQIVEKANE----VLEGKVGKE 444

Query: 336  IVVYGEHKQLDGTRSDFSVSDNQFQEEDSEGLQLALNRVIVQGLMASLNCPWRWEKGVCK 395
            IV+Y + +      +  S   N+    D    +L+  RV V  LMA+ NCPWR  +G   
Sbjct: 445  IVIYSKDENSKRKVTSLSGRVNKVPAGD----ELSQERVTVLCLMAAQNCPWR-RQGKGG 499

Query: 396  PNYVSGTGQRERKKHNSLPPSKSPSEEIIKAKG-----SEGSYCKRNSYSGRNAYEN--R 448
             N  SG    + KK       KS S  I++AK      S G   KR S   R A EN   
Sbjct: 500  LNLDSGMSGSKGKKDGLAGLEKSKS--IVRAKTDRAEKSGGKSIKRKSSPTRXA-ENLGM 556

Query: 449  SALVMRDGKDSLGHDRGQENFHLGQRSHVFDVTLPPH-PRSSSGKGPENDAIGARNKVRE 507
              LV++D +DS+ H   Q +FH+GQR   F+V+LPP  P SSSGK    D+I  RNKVRE
Sbjct: 557  GQLVVKDEEDSIEHYEEQGDFHVGQRLLDFNVSLPPFGPSSSSGKVEACDSIVTRNKVRE 616

Query: 508  TLRLFQAVCRKLLHEEEAKPSRQ-NSHKRVDYLAARILKDKKKYIPVDKKVIGSVPGVEV 566
            TLRLFQA+ RKLL EEEAK  +  N  +RVDYLA+RILKDK K++   K++IG VPGVEV
Sbjct: 617  TLRLFQAIFRKLLQEEEAKTKQGGNPVRRVDYLASRILKDKGKHVNTGKQIIGPVPGVEV 676

Query: 567  GDEFQYRVELNMIGLHLQIQGGIDYVKHKGKILATSIVASGGYDDNLDNSDVLIYTGQGG 626
            GDEFQYRVEL +IGLH   QGGIDY KH GKILATSIVASGGY D+LDNSDVLIY+GQGG
Sbjct: 677  GDEFQYRVELGIIGLHRPTQGGIDYRKHXGKILATSIVASGGYADDLDNSDVLIYSGQGG 736

Query: 627  NVMNGGKEPEDQKLERGNLALANSIHEQN------------------------------- 655
            N++ G K+PEDQKLERGNLAL NSI  +N                               
Sbjct: 737  NLIGGDKQPEDQKLERGNLALKNSIDAKNLVRVIRGFKETKAPEYMDSRAKVVTTYIYDG 796

Query: 656  ----PRYWQDVGSHGKLVFKFKLARIPGQPELSWKVVKKCKKSKVREGLCVDDISQGKEL 711
                 +YWQ++G HGKLVFKF+L RIPGQPEL+WK VK  KK KVREGLCVDDIS GKE 
Sbjct: 797  LYLVEKYWQEIGPHGKLVFKFQLNRIPGQPELAWKEVKNSKKFKVREGLCVDDISMGKEP 856

Query: 712  IPICAVNTVDDEKPPSFKYITNIIYPDWCRPVPPKGCDCTNGCSELGKCACVAKNGGELP 771
            IPI AVNT+DDEKPP F YIT++IYPDWC  +PP GCDC+NGCS+  KC+C  KNGGE+P
Sbjct: 857  IPIFAVNTIDDEKPPPFTYITSMIYPDWCHRLPPNGCDCSNGCSDSEKCSCAVKNGGEIP 916

Query: 772  YNHNGAIVQAKPLVYECGPSCKCPPSCYNRVSQQGIKFQLEIFKTEARGWGVRSLNSIPS 831
            YN+NGAIV+AKPLVYEC PSCKC  SC+NRVSQ GIKFQLEIFKT +RGWGVRSL SIPS
Sbjct: 917  YNYNGAIVEAKPLVYECXPSCKCSRSCHNRVSQHGIKFQLEIFKTVSRGWGVRSLTSIPS 976

Query: 832  GSFICEYAGELLEEKEAERRTSNDEYLFDIGNNYNDGSLWGGLSNVMPDAPSSSCGVVED 891
            GSFICEY GELLE+KEAE+RT NDEYLFDIG+NYN+  LW G+S +MPDA  SSC VVED
Sbjct: 977  GSFICEYIGELLEDKEAEQRTGNDEYLFDIGHNYNE-ILWDGISTLMPDAQXSSCEVVED 1035

Query: 892  GGFTIDAVEYGNVGRFVNHSCSPNLYAQNVLYDHEDKRMPHIMLFAAENIPPLQELTYHY 951
             GFTIDA +YGNVGRF+NHSCSPNLYAQNVLYDH++KR+PHIMLFAAENIPPLQELTYHY
Sbjct: 1036 AGFTIDAAQYGNVGRFINHSCSPNLYAQNVLYDHDNKRIPHIMLFAAENIPPLQELTYHY 1095

Query: 952  NYVIDQVYDSSGNIKKKSCFCGSSECTGRLY 982
            NY IDQV DS+GNIKKKSC+CGS ECTGR+Y
Sbjct: 1096 NYTIDQVRDSNGNIKKKSCYCGSDECTGRMY 1126

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359496368|ref|XP_003635220.1| PREDICTED: uncharacterized protein LOC100242100 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449459056|ref|XP_004147262.1| PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like [Cucumis sativus] gi|449510495|ref|XP_004163682.1| PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356540561|ref|XP_003538756.1| PREDICTED: uncharacterized protein LOC100776895 [Glycine max] Back     alignment and taxonomy information
>gi|357482201|ref|XP_003611386.1| Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 [Medicago truncatula] gi|355512721|gb|AES94344.1| Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 [Medicago truncatula] Back     alignment and taxonomy information
>gi|224126633|ref|XP_002329603.1| SET domain protein [Populus trichocarpa] gi|222870312|gb|EEF07443.1| SET domain protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356497095|ref|XP_003517399.1| PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like [Glycine max] Back     alignment and taxonomy information
>gi|255580797|ref|XP_002531219.1| histone-lysine n-methyltransferase, suvh, putative [Ricinus communis] gi|223529179|gb|EEF31155.1| histone-lysine n-methyltransferase, suvh, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297825147|ref|XP_002880456.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297326295|gb|EFH56715.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|30681803|ref|NP_850030.1| histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 [Arabidopsis thaliana] gi|42570881|ref|NP_973514.1| histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 [Arabidopsis thaliana] gi|30580521|sp|Q8VZ17.2|SUVH6_ARATH RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6; AltName: Full=Histone H3-K9 methyltransferase 6; Short=H3-K9-HMTase 6; AltName: Full=Protein SET DOMAIN GROUP 23; AltName: Full=Suppressor of variegation 3-9 homolog protein 6; Short=Su(var)3-9 homolog protein 6 gi|13517753|gb|AAK28971.1|AF344449_1 SUVH6 [Arabidopsis thaliana] gi|27754253|gb|AAO22580.1| putative mammalian MHC III region protein G9a [Arabidopsis thaliana] gi|330252253|gb|AEC07347.1| histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 [Arabidopsis thaliana] gi|330252254|gb|AEC07348.1| histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query982
TAIR|locus:2065988790 SUVH6 "SU(VAR)3-9 homolog 6" [ 0.329 0.410 0.669 2.7e-182
TAIR|locus:2063384794 SUVH5 "SU(VAR)3-9 homolog 5" [ 0.208 0.258 0.689 3e-171
TAIR|locus:2175289670 SUVH1 "SU(VAR)3-9 homolog 1" [ 0.319 0.468 0.408 9e-90
TAIR|locus:2032592669 SUVH3 "SU(VAR)3-9 homolog 3" [ 0.363 0.533 0.365 1.1e-84
TAIR|locus:2140827650 SUVH9 "SU(VAR)3-9 homolog 9" [ 0.301 0.455 0.401 6.2e-81
TAIR|locus:2051083651 SUVH2 "SU(VAR)3-9 homolog 2" [ 0.303 0.457 0.363 1.3e-71
TAIR|locus:2159133624 SUVH4 "SU(VAR)3-9 homolog 4" [ 0.330 0.520 0.399 1.8e-65
TAIR|locus:2030953693 SUVH7 "SU(VAR)3-9 homolog 7" [ 0.323 0.458 0.365 6.8e-61
TAIR|locus:2047266755 SDG21 "SET domain group 21" [A 0.310 0.403 0.363 8e-56
ZFIN|ZDB-GENE-080515-31286 ehmt1b "euchromatic histone-ly 0.164 0.125 0.356 1.9e-36
TAIR|locus:2065988 SUVH6 "SU(VAR)3-9 homolog 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1181 (420.8 bits), Expect = 2.7e-182, Sum P(4) = 2.7e-182
 Identities = 221/330 (66%), Positives = 244/330 (73%)

Query:   657 RYWQDVGSHGKLVFKFKLARIPGQPELSWXXXXXXXXXXXREGLCVDDISQGKELIPICA 716
             +YWQ VGSHG  VFKF+L RIPGQPELSW           REGLC  DIS+GKE  PI A
Sbjct:   463 KYWQQVGSHGMNVFKFQLRRIPGQPELSWVEVKKSKSKY-REGLCKLDISEGKEQSPISA 521

Query:   717 VNTVDDEKPPSFKYITNIIYPDWCRPVPPKGCDCTNGCSELGK--CACVAKNGGELPYNH 774
             VN +DDEKPP F Y   +IYPDWCRPVPPK C CT  C+E     CACV KNGGE+PYN 
Sbjct:   522 VNEIDDEKPPLFTYTVKLIYPDWCRPVPPKSCCCTTRCTEAEARVCACVEKNGGEIPYNF 581

Query:   775 NGAIVQAKPLVYECGPSCKCPPSCYNRVSQQGIKFQLEIFKTEARGWGVRSLNSIPSGSF 834
             +GAIV AKP +YECGP CKCP SCY RV+Q GIK  LEIFKT++RGWGVR L SIP GSF
Sbjct:   582 DGAIVGAKPTIYECGPLCKCPSSCYLRVTQHGIKLPLEIFKTKSRGWGVRCLKSIPIGSF 641

Query:   835 ICEYAGELLEEKEAERRTSNDEYLFDIGNNYNDGSLWGGLSNVM--PDAPSSSCGVVEDG 892
             ICEY GELLE+ EAERR  NDEYLFDIGN Y D SL  G+S +M    A  S     E  
Sbjct:   642 ICEYVGELLEDSEAERRIGNDEYLFDIGNRY-DNSLAQGMSELMLGTQAGRSMAEGDESS 700

Query:   893 GFTIDAVEYGNVGRFVNHSCSPNLYAQNVLYDHEDKRMPHIMLFAAENIPPLQELTYHYN 952
             GFTIDA   GNVGRF+NHSCSPNLYAQNVLYDHED R+PH+M FA +NIPPLQEL Y YN
Sbjct:   701 GFTIDAASKGNVGRFINHSCSPNLYAQNVLYDHEDSRIPHVMFFAQDNIPPLQELCYDYN 760

Query:   953 YVIDQVYDSSGNIKKKSCFCGSSECTGRLY 982
             Y +DQV DS GNIK+K CFCG++ C  RLY
Sbjct:   761 YALDQVRDSKGNIKQKPCFCGAAVCRRRLY 790
GO:0005634 "nucleus" evidence=ISM;IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0018024 "histone-lysine N-methyltransferase activity" evidence=IEA
GO:0034968 "histone lysine methylation" evidence=IEA
GO:0042393 "histone binding" evidence=IEA
GO:0008168 "methyltransferase activity" evidence=IDA
GO:0016571 "histone methylation" evidence=IDA
GO:0008327 "methyl-CpG binding" evidence=IDA
GO:0010428 "methyl-CpNpG binding" evidence=IDA
GO:0010429 "methyl-CpNpN binding" evidence=IDA
TAIR|locus:2063384 SUVH5 "SU(VAR)3-9 homolog 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2175289 SUVH1 "SU(VAR)3-9 homolog 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032592 SUVH3 "SU(VAR)3-9 homolog 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2140827 SUVH9 "SU(VAR)3-9 homolog 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2051083 SUVH2 "SU(VAR)3-9 homolog 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2159133 SUVH4 "SU(VAR)3-9 homolog 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030953 SUVH7 "SU(VAR)3-9 homolog 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2047266 SDG21 "SET domain group 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-080515-3 ehmt1b "euchromatic histone-lysine N-methyltransferase 1b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.1.1.430.914
3rd Layer2.1.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
SDG920
SET domain protein (513 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query982
pfam02182154 pfam02182, YDG_SRA, YDG/SRA domain 9e-58
smart00466155 smart00466, SRA, SET and RING finger associated do 2e-51
pfam05033103 pfam05033, Pre-SET, Pre-SET motif 5e-35
smart00317124 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zest 9e-34
smart0046898 smart00468, PreSET, N-terminal to some SET domains 4e-28
pfam00856113 pfam00856, SET, SET domain 1e-26
COG2940480 COG2940, COG2940, Proteins containing SET domain [ 1e-14
>gnl|CDD|216920 pfam02182, YDG_SRA, YDG/SRA domain Back     alignment and domain information 
 Score =  195 bits (497), Expect = 9e-58
 Identities = 82/154 (53%), Positives = 98/154 (63%), Gaps = 29/154 (18%)

Query: 556 KVIGSVPGVEVGDEFQYRVELNMIGLHLQIQGGIDYVKHKGKILATSIVASGGYDDNLDN 615
           K IG VPGVEVGD F YRVEL ++GLH   Q GID +K +G  +ATSIV+SGGY+D+ DN
Sbjct: 1   KRIGHVPGVEVGDIFFYRVELCVVGLHRPHQAGIDGMKSEGGTIATSIVSSGGYEDDEDN 60

Query: 616 SDVLIYTGQGGNVMNGGKEPEDQKLERGNLALANSIHEQNP------------------- 656
            DVL+YTGQGGN ++G K+ EDQKLERGNLALANS  + NP                   
Sbjct: 61  GDVLVYTGQGGNDLSGNKQSEDQKLERGNLALANSCRKGNPVRVIRGEKGPSSHAPKGGI 120

Query: 657 ----------RYWQDVGSHGKLVFKFKLARIPGQ 680
                     +YW++ G  G  VFKFKL RIPGQ
Sbjct: 121 YRYDGLYRVEKYWREKGKSGFKVFKFKLVRIPGQ 154

The function of this domain is unknown, it contains a conserved motif YDG after which it has been named. Length = 154
>gnl|CDD|197742 smart00466, SRA, SET and RING finger associated domain Back     alignment and domain information
>gnl|CDD|218393 pfam05033, Pre-SET, Pre-SET motif Back     alignment and domain information
>gnl|CDD|214614 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain Back     alignment and domain information
>gnl|CDD|128744 smart00468, PreSET, N-terminal to some SET domains Back     alignment and domain information
>gnl|CDD|216155 pfam00856, SET, SET domain Back     alignment and domain information
>gnl|CDD|225491 COG2940, COG2940, Proteins containing SET domain [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 982
KOG1082364 consensus Histone H3 (Lys9) methyltransferase SUV3 100.0
smart00466155 SRA SET and RING finger associated domain. Domain 100.0
PF02182155 SAD_SRA: SAD/SRA domain; InterPro: IPR003105 This 100.0
KOG4442 729 consensus Clathrin coat binding protein/Huntingtin 100.0
KOG1141 1262 consensus Predicted histone methyl transferase [Ch 100.0
KOG10801005 consensus Histone H3 (Lys4) methyltransferase comp 99.95
KOG1079739 consensus Transcriptional repressor EZH1 [Transcri 99.93
smart00317116 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) 99.86
KOG10831306 consensus Putative transcription factor ASH1/LIN-5 99.83
PF05033103 Pre-SET: Pre-SET motif; InterPro: IPR007728 This r 99.77
smart0046898 PreSET N-terminal to some SET domains. A Cys-rich 99.73
COG2940480 Proteins containing SET domain [General function p 99.63
KOG1085392 consensus Predicted methyltransferase (contains a 99.6
PF00856162 SET: SET domain; InterPro: IPR001214 The SET domai 99.29
KOG11411262 consensus Predicted histone methyl transferase [Ch 98.81
KOG1081463 consensus Transcription factor NSD1 and related SE 98.69
KOG2589 453 consensus Histone tail methylase [Chromatin struct 98.15
KOG2461 396 consensus Transcription factor BLIMP-1/PRDI-BF1, c 97.59
smart0050826 PostSET Cysteine-rich motif following a subset of 95.48
smart0057051 AWS associated with SET domains. subdomain of PRES 93.9
KOG2084 482 consensus Predicted histone tail methylase contain 85.19
>KOG1082 consensus Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing [Chromatin structure and dynamics; Transcription] Back     alignment and domain information 
Probab=100.00  E-value=1.2e-51  Score=460.05  Aligned_cols=288  Identities=39%  Similarity=0.662  Sum_probs=239.0

Q ss_pred             cccccCceecccCCCCCccCeEEEeccCCCCCCCCEEecccccCC-CCC-CCCCCCCCCCCCCcCCC--CccccccCCCC
Q 048157          694 SKVREGLCVDDISQGKELIPICAVNTVDDEKPPSFKYITNIIYPD-WCR-PVPPKGCDCTNGCSELG--KCACVAKNGGE  769 (982)
Q Consensus       694 ~k~R~gli~~DIS~GkE~iPI~vvN~VDde~pP~F~YI~~~iyp~-~~~-~~p~~GCdC~~~C~d~~--~C~C~~kngg~  769 (982)
                      .+.+.+....||+.|.|.+||+++|+||++.++.|+|++..++.. ... ..+..+|.|.+.|....  .|.|...|++.
T Consensus        54 ~~~~~~~~~~d~~~~~e~~~v~~~n~id~~~~~~f~y~~~~~~~~~~~~~~~~~~~c~C~~~~~~~~~~~C~C~~~n~~~  133 (364)
T KOG1082|consen   54 DKLEAKSELEDIALGSENLPVPLVNRIDEDAPLYFQYIATEIVDPGELSDCENSTGCRCCSSCSSVLPLTCLCERHNGGL  133 (364)
T ss_pred             cccccccccccccCccccCceeeeeeccCCccccceeccccccCccccccCccccCCCccCCCCCCCCccccChHhhCCc
Confidence            445567789999999999999999999988888899999987765 322 24568899998887642  39999999999


Q ss_pred             cccCCCC---ceeccCCeeeccCCCCCCCCCCCCccccccceeeEEEEEcCCCceeEeeccccCCCCeEEEeceEeccHH
Q 048157          770 LPYNHNG---AIVQAKPLVYECGPSCKCPPSCYNRVSQQGIKFQLEIFKTEARGWGVRSLNSIPSGSFICEYAGELLEEK  846 (982)
Q Consensus       770 ~pYn~nG---~Lv~~rplIyECgp~C~C~~sC~NRvvQrG~k~~LEVFrT~~KGWGVRA~e~IpaGtFIcEYvGEVIt~e  846 (982)
                      ++|+.+|   .+...+..+|||++.|+|++.|.||++|+|++.+|+||+|+.+||||||++.|++|+|||||+||+++..
T Consensus       134 ~~~~~~~~~~~~~~~~~~i~EC~~~C~C~~~C~nRv~q~g~~~~leIfrt~~kGwgvRs~~~I~~G~fvcEyaGe~~t~~  213 (364)
T KOG1082|consen  134 VAYTCDGDCGTLGKFKEPVFECSVACGCHPDCANRVVQKGLQFHLEVFRTPEKGWGVRTLDPIPAGEFVCEYAGEVLTSE  213 (364)
T ss_pred             cccccCCccccccccCccccccccCCCCCCcCcchhhccccccceEEEecCCceeeecccccccCCCeeEEEeeEecChH
Confidence            9999888   6778889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCceeeccCCCCCCCCccCCc--cccCCCCCCCCCccccCCcEEEeccccCCcccccccCCCCCceeEEEEEc
Q 048157          847 EAERRTSNDEYLFDIGNNYNDGSLWGGL--SNVMPDAPSSSCGVVEDGGFTIDAVEYGNVGRFVNHSCSPNLYAQNVLYD  924 (982)
Q Consensus       847 Eae~R~~~d~YlFdl~~~~~~~~~w~~l--s~~~pd~~~~s~~~~~d~~~vIDA~~~GNvARFINHSC~PN~~vq~V~vd  924 (982)
                      +++++..+..|.++....+.. ..|...  ...+...+..+........++|||..+||++|||||||.||+.++.|+.+
T Consensus       214 e~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ida~~~GNv~RfinHSC~PN~~~~~v~~~  292 (364)
T KOG1082|consen  214 EAQRRTHLREYLDDDCDAYSI-ADREWVDESPVGNTFVAPSLPGGPGRELLIDAKPHGNVARFINHSCSPNLLYQAVFQD  292 (364)
T ss_pred             Hhhhccccccccccccccchh-hhccccccccccccccccccccCCCcceEEchhhcccccccccCCCCccceeeeeeec
Confidence            999998788888875543321 222222  22222222333334456789999999999999999999999999999999


Q ss_pred             CCCCcccEEEEEEccCCCCCCeEEEecCCCccc-ccccC---CCCcCeeeecCCCCCccccC
Q 048157          925 HEDKRMPHIMLFAAENIPPLQELTYHYNYVIDQ-VYDSS---GNIKKKSCFCGSSECTGRLY  982 (982)
Q Consensus       925 ~~d~~~PrIafFA~RDI~pGEELTfDYG~~~~~-v~ds~---G~ikk~~ClCGS~nCRG~Ly  982 (982)
                      +.+..++||+|||+++|+||||||||||..+.. +.+..   ....+..|.||+.+||++++
T Consensus       293 ~~~~~~~~i~ffa~~~I~p~~ELT~dYg~~~~~~~~~~~~~~~~~~~~~c~c~~~~cr~~~~  354 (364)
T KOG1082|consen  293 EFVLLYLRIGFFALRDISPGEELTLDYGKAYKLLVQDGANIYTPVMKKNCNCGLEKCRGLLG  354 (364)
T ss_pred             CCccchheeeeeeccccCCCcccchhhcccccccccccccccccccchhhcCCCHHhCcccC
Confidence            999999999999999999999999999987641 11111   12356899999999999885

>smart00466 SRA SET and RING finger associated domain Back     alignment and domain information
>PF02182 SAD_SRA: SAD/SRA domain; InterPro: IPR003105 This domain has been termed SRA-YDG, for SET and Ring finger Associated, and because of the conserved YDG motif within the domain Back     alignment and domain information
>KOG4442 consensus Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1141 consensus Predicted histone methyl transferase [Chromatin structure and dynamics] Back     alignment and domain information
>KOG1080 consensus Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases [Chromatin structure and dynamics; Transcription] Back     alignment and domain information
>KOG1079 consensus Transcriptional repressor EZH1 [Transcription] Back     alignment and domain information
>smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain Back     alignment and domain information
>KOG1083 consensus Putative transcription factor ASH1/LIN-59 [Transcription] Back     alignment and domain information
>PF05033 Pre-SET: Pre-SET motif; InterPro: IPR007728 This region is found in a number of histone lysine methyltransferases (HMTase), N-terminal to the SET domain; it is generally described as the pre-SET domain Back     alignment and domain information
>smart00468 PreSET N-terminal to some SET domains Back     alignment and domain information
>COG2940 Proteins containing SET domain [General function prediction only] Back     alignment and domain information
>KOG1085 consensus Predicted methyltransferase (contains a SET domain) [General function prediction only] Back     alignment and domain information
>PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco Back     alignment and domain information
>KOG1141 consensus Predicted histone methyl transferase [Chromatin structure and dynamics] Back     alignment and domain information
>KOG1081 consensus Transcription factor NSD1 and related SET domain proteins [Transcription] Back     alignment and domain information
>KOG2589 consensus Histone tail methylase [Chromatin structure and dynamics] Back     alignment and domain information
>KOG2461 consensus Transcription factor BLIMP-1/PRDI-BF1, contains C2H2-type Zn-finger and SET domains [Transcription] Back     alignment and domain information
>smart00508 PostSET Cysteine-rich motif following a subset of SET domains Back     alignment and domain information
>smart00570 AWS associated with SET domains Back     alignment and domain information
>KOG2084 consensus Predicted histone tail methylase containing SET domain [Chromatin structure and dynamics] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query982
3q0c_X167 Crystal Structure Of Suvh5 Sra-Fully Methylated Cg 6e-41
3q0b_X167 Crystal Structure Of Suvh5 Sra- Fully Methylated Cg 2e-40
2o8j_A281 Human Euchromatic Histone Methyltransferase 2 Lengt 6e-39
3k5k_A283 Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazolin 7e-39
2igq_A285 Human Euchromatic Histone Methyltransferase 1 Lengt 2e-38
3hna_A287 Crystal Structure Of Catalytic Domain Of Human Euch 2e-38
3fpd_A261 G9a-Like Protein Lysine Methyltransferase Inhibitio 5e-38
4i51_A286 Methyltransferase Domain Of Human Euchromatic Histo 2e-37
2r3a_A300 Methyltransferase Domain Of Human Suppressor Of Var 4e-35
1mvh_A299 Structure Of The Set Domain Histone Lysine Methyltr 6e-34
3bo5_A290 Crystal Structure Of Methyltransferase Domain Of Hu 1e-30
1ml9_A302 Structure Of The Neurospora Set Domain Protein Dim- 8e-25
4fmu_A278 Crystal Structure Of Methyltransferase Domain Of Hu 3e-18
3ooi_A232 Crystal Structure Of Human Histone-Lysine N-Methylt 2e-17
3ope_A222 Structural Basis Of Auto-Inhibitory Mechanism Of Hi 1e-16
2w5y_A192 Binary Complex Of The Mixed Lineage Leukaemia (Mll1 1e-10
2zkd_A210 Crystal Structure Of The Sra Domain Of Mouse Np95 I 3e-10
3f8j_B212 Mouse Uhrf1 Sra Domain Bound With Hemi-methylated C 3e-10
2zo0_B212 Mouse Np95 Sra Domain Dna Specific Complex 1 Length 4e-10
2pb7_A239 Crystal Structure Of The Sra Domain Of The Human Uh 6e-09
3bi7_A212 Crystal Structure Of The Sra Domain Of E3 Ubiquitin 7e-09
3dwh_A208 Structural And Functional Analysis Of Sra Domain Le 9e-09
3clz_A212 The Set And Ring Associated (Sra) Domain Of Uhrf1 B 9e-09
3oln_A231 Crystal Structure Of The Sra Domain Of E3 Ubiquitin 2e-08
4ij8_A165 Crystal Structure Of The Complex Of Setd8 With Sam 7e-05
3f9z_A166 Structural Insights Into Lysine Multiple Methylatio 8e-05
3f9w_A166 Structural Insights Into Lysine Multiple Methylatio 8e-05
2bqz_A161 Crystal Structure Of A Ternary Complex Of The Human 2e-04
1zkk_A167 Crystal Structure Of Hset8 In Ternary Complex With 2e-04
>pdb|3Q0C|X Chain X, Crystal Structure Of Suvh5 Sra-Fully Methylated Cg Dna Complex In Space Group P6122 Length = 167 Back     alignment and structure 
Iteration: 1

 Score =  166 bits (420), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 89/160 (55%), Positives = 108/160 (67%), Gaps = 33/160 (20%)
Query: 559 GSVPGVEVGDEFQYRVELNMIGLHLQIQGGIDYVKHKG-KILATSIVASGGYDDNLDNSD 617
           G+VPGVEVGDEFQYR+ELN++G+H   Q GIDY+K  G +++ATSIV+SGGY+D LDNSD
Sbjct: 4   GTVPGVEVGDEFQYRMELNLLGIHRPSQSGIDYMKDDGGELVATSIVSSGGYNDVLDNSD 63
Query: 618 VLIYTGQGGNV--MNGGKEPEDQKLERGNLALANSIHEQNP------------------- 656
           VLIYTGQGGNV      + P+DQ+L  GNLAL NSI+++NP                   
Sbjct: 64  VLIYTGQGGNVGKKKNNEPPKDQQLVTGNLALKNSINKKNPVRVIRGIKNTTLQSSVVAK 123
Query: 657 -----------RYWQDVGSHGKLVFKFKLARIPGQPELSW 685
                       YW++ GSHGKLVFKFKL RIPGQPEL W
Sbjct: 124 NYVYDGLYLVEEYWEETGSHGKLVFKFKLRRIPGQPELPW 163
>pdb|3Q0B|X Chain X, Crystal Structure Of Suvh5 Sra- Fully Methylated Cg Dna Complex In Space Group P42212 Length = 167 Back     alignment and structure
>pdb|2O8J|A Chain A, Human Euchromatic Histone Methyltransferase 2 Length = 281 Back     alignment and structure
>pdb|3K5K|A Chain A, Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazoline As A Potent Inhibitor Of Histone Lysine Methyltransferase, G9a Length = 283 Back     alignment and structure
>pdb|2IGQ|A Chain A, Human Euchromatic Histone Methyltransferase 1 Length = 285 Back     alignment and structure
>pdb|3HNA|A Chain A, Crystal Structure Of Catalytic Domain Of Human Euchromatic Histone Methyltransferase 1 In Complex With Sah And Mono- Methylated H3k9 Peptide Length = 287 Back     alignment and structure
>pdb|3FPD|A Chain A, G9a-Like Protein Lysine Methyltransferase Inhibition By Bix- 01294 Length = 261 Back     alignment and structure
>pdb|4I51|A Chain A, Methyltransferase Domain Of Human Euchromatic Histone Methyltransferase 1, Mutant Y1211a Length = 286 Back     alignment and structure
>pdb|2R3A|A Chain A, Methyltransferase Domain Of Human Suppressor Of Variegation 3-9 Homolog 2 Length = 300 Back     alignment and structure
>pdb|1MVH|A Chain A, Structure Of The Set Domain Histone Lysine Methyltransferase Clr4 Length = 299 Back     alignment and structure
>pdb|3BO5|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Histone-Lysine N-Methyltransferase Setmar Length = 290 Back     alignment and structure
>pdb|1ML9|A Chain A, Structure Of The Neurospora Set Domain Protein Dim-5, A Histone Lysine Methyltransferase Length = 302 Back     alignment and structure
>pdb|4FMU|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Set Domain- Containing Protein 2 Compound: Pr-Snf Length = 278 Back     alignment and structure
>pdb|3OOI|A Chain A, Crystal Structure Of Human Histone-Lysine N-Methyltransferase Nsd1 Set Domain In Complex With S-Adenosyl-L-Methionine Length = 232 Back     alignment and structure
>pdb|3OPE|A Chain A, Structural Basis Of Auto-Inhibitory Mechanism Of Histone Methyltransferase Length = 222 Back     alignment and structure
>pdb|2W5Y|A Chain A, Binary Complex Of The Mixed Lineage Leukaemia (Mll1) Set Domain With The Cofactor Product S-Adenosylhomocysteine. Length = 192 Back     alignment and structure
>pdb|2ZKD|A Chain A, Crystal Structure Of The Sra Domain Of Mouse Np95 In Complex With Hemi-Methylated Cpg Dna Length = 210 Back     alignment and structure
>pdb|3F8J|B Chain B, Mouse Uhrf1 Sra Domain Bound With Hemi-methylated Cpg, Crystal Structure In Space Group C222(1) Length = 212 Back     alignment and structure
>pdb|2ZO0|B Chain B, Mouse Np95 Sra Domain Dna Specific Complex 1 Length = 212 Back     alignment and structure
>pdb|2PB7|A Chain A, Crystal Structure Of The Sra Domain Of The Human Uhrf1 Protein Length = 239 Back     alignment and structure
>pdb|3BI7|A Chain A, Crystal Structure Of The Sra Domain Of E3 Ubiquitin-Protein Ligase Uhrf1 Length = 212 Back     alignment and structure
>pdb|3DWH|A Chain A, Structural And Functional Analysis Of Sra Domain Length = 208 Back     alignment and structure
>pdb|3CLZ|A Chain A, The Set And Ring Associated (Sra) Domain Of Uhrf1 Bound To Methylated Dna Length = 212 Back     alignment and structure
>pdb|3OLN|A Chain A, Crystal Structure Of The Sra Domain Of E3 Ubiquitin-Protein Ligase Uhrf2 Length = 231 Back     alignment and structure
>pdb|4IJ8|A Chain A, Crystal Structure Of The Complex Of Setd8 With Sam Length = 165 Back     alignment and structure
>pdb|3F9Z|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y245f H4-Lys20 ADOHCY Length = 166 Back     alignment and structure
>pdb|3F9W|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y334f H4-Lys20 ADOHCY Length = 166 Back     alignment and structure
>pdb|2BQZ|A Chain A, Crystal Structure Of A Ternary Complex Of The Human Histone Methyltransferase Pr-Set7 (Also Known As Set8) Length = 161 Back     alignment and structure
>pdb|1ZKK|A Chain A, Crystal Structure Of Hset8 In Ternary Complex With H4 Peptide (16-24) And Adohcy Length = 167 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query982
1mvh_A299 Cryptic LOCI regulator 4; lysine methyltransferase 1e-105
2r3a_A300 Histone-lysine N-methyltransferase SUV39H2; histon 3e-98
3hna_A287 Histone-lysine N-methyltransferase, H3 lysine-9 sp 3e-97
3bo5_A290 Histone-lysine N-methyltransferase setmar; SET dom 1e-95
1ml9_A302 Histone H3 methyltransferase DIM-5; adoMet-depende 4e-94
3h6l_A278 Histone-lysine N-methyltransferase SETD2; SET doma 4e-75
3ooi_A232 Histone-lysine N-methyltransferase, H3 lysine-36 l 6e-72
3ope_A222 Probable histone-lysine N-methyltransferase ASH1L; 2e-71
2pb7_A239 E3 ubiquitin-protein ligase UHRF1; beta barrel, NE 1e-42
3q0b_X167 Histone-lysine N-methyltransferase, H3 lysine-9 S 1e-42
2w5y_A192 Histone-lysine N-methyltransferase HRX; transcript 6e-40
3f9x_A166 Histone-lysine N-methyltransferase SETD8; methyltr 1e-39
3oln_A231 E3 ubiquitin-protein ligase UHRF2; DNA-binding, me 8e-39
3fde_A212 E3 ubiquitin-protein ligase UHRF1; SRA domain, bas 5e-38
3s8p_A273 Histone-lysine N-methyltransferase SUV420H1; SET d 1e-22
1n3j_A119 A612L, histone H3 lysine methyltransferase; beta b 1e-22
2f69_A261 Histone-lysine N-methyltransferase, H3 lysine-4 sp 2e-19
3rq4_A247 Histone-lysine N-methyltransferase SUV420H2; suppr 9e-19
2qpw_A149 PR domain zinc finger protein 2; methyltransferase 3e-13
3ep0_A170 PR domain zinc finger protein 12; PR domain-contai 2e-11
3db5_A151 PR domain zinc finger protein 4; methyltransferase 9e-10
3dal_A196 PR domain zinc finger protein 1; methyltransferase 2e-09
3ihx_A152 PR domain zinc finger protein 10; PRDM10, methyltr 8e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
3qwp_A 429 SET and MYND domain-containing protein 3; SMYD3,SE 3e-04
3ray_A237 PR domain-containing protein 11; structural genomi 3e-04
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A Length = 299 Back     alignment and structure
 Score =  328 bits (843), Expect = e-105
 Identities = 93/304 (30%), Positives = 137/304 (45%), Gaps = 48/304 (15%)

Query: 703 DDISQGKELIPICAVNTVDDEKPPS--FKYITNIIYPDWCRPVPPK---GCDCTN----G 753
               +  E   +  VN VDDE  PS  F++I+         P  P    GC+C++     
Sbjct: 19  RKKLREIEGPEVTLVNEVDDEPCPSLDFQFISQYRLTQGVIPPDPNFQSGCNCSSLGGCD 78

Query: 754 CSELGKCACVAK--NGGELPYNHNGAI-VQAKPLVYECGPSCKCPPSCYNRVSQQGIKFQ 810
            +   +C C+          Y+  G +      ++YEC   C C   C NRV Q+G    
Sbjct: 79  LNNPSRCECLDDLDEPTHFAYDAQGRVRADTGAVIYECNSFCSCSMECPNRVVQRGRTLP 138

Query: 811 LEIFKTEARGWGVRSLNSIPSGSFICEYAGELLEEKEAERRTSNDE-----YLFDIGNNY 865
           LEIFKT+ +GWGVRSL   P+G+FI  Y GE++   EA +R  N +     YLFD+    
Sbjct: 139 LEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDGITYLFDLDMFD 198

Query: 866 NDGSLWGGLSNVMPDAPSSSCGVVEDGGFTIDAVEYGNVGRFVNHSCSPNLYAQNVLYDH 925
                                   +   +T+DA  YG+V RF NHSCSPN+   + + +H
Sbjct: 199 ------------------------DASEYTVDAQNYGDVSRFFNHSCSPNIAIYSAVRNH 234

Query: 926 EDKRMPHIMLFAAENIPPLQELTYHYNYVIDQVYDSSGNI-------KKKSCFCGSSECT 978
             + +  +  FA ++I PL+ELT+ Y    D     S           ++ C CGS+ C 
Sbjct: 235 GFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSPVQSQKSQQNRISKLRRQCKCGSANCR 294

Query: 979 GRLY 982
           G L+
Sbjct: 295 GWLF 298
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} Length = 300 Back     alignment and structure
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* Length = 287 Back     alignment and structure
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} Length = 290 Back     alignment and structure
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* Length = 302 Back     alignment and structure
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} Length = 232 Back     alignment and structure
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} Length = 222 Back     alignment and structure
>2pb7_A E3 ubiquitin-protein ligase UHRF1; beta barrel, NEW fold; 1.90A {Homo sapiens} SCOP: b.122.1.12 Length = 239 Back     alignment and structure
>3q0b_X Histone-lysine N-methyltransferase, H3 lysine-9 S SUVH5; SRA, fully methylated CG, SUVH5, 5MC binding protein, fully methylated CG duplex DNA; HET: DNA 5CM; 2.20A {Arabidopsis thaliana} PDB: 3q0c_X* 3q0d_X* 3q0f_X* Length = 167 Back     alignment and structure
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* Length = 192 Back     alignment and structure
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 2bqz_A* Length = 166 Back     alignment and structure
>3oln_A E3 ubiquitin-protein ligase UHRF2; DNA-binding, metal-binding, nucleus, phosphorylation transcription, transcription regulation; 2.30A {Homo sapiens} Length = 231 Back     alignment and structure
>3fde_A E3 ubiquitin-protein ligase UHRF1; SRA domain, base flipping, DNA CPG methylation, cell cycle, developmental protein, DNA damage; HET: 5CM; 1.41A {Mus musculus} PDB: 2zo0_B* 2zo2_B* 3f8i_A* 2zo1_B* 3f8j_B* 2zkd_A* 2zke_A* 2zkf_A* 2zkg_A 3dwh_A 3bi7_A 3clz_A* Length = 212 Back     alignment and structure
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Length = 273 Back     alignment and structure
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Length = 119 Back     alignment and structure
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* Length = 261 Back     alignment and structure
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Length = 247 Back     alignment and structure
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* Length = 149 Back     alignment and structure
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} Length = 170 Back     alignment and structure
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} Length = 151 Back     alignment and structure
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} Length = 196 Back     alignment and structure
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} Length = 152 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Length = 429 Back     alignment and structure
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} Length = 237 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query982
3hna_A287 Histone-lysine N-methyltransferase, H3 lysine-9 sp 100.0
1mvh_A299 Cryptic LOCI regulator 4; lysine methyltransferase 100.0
1ml9_A302 Histone H3 methyltransferase DIM-5; adoMet-depende 100.0
3bo5_A290 Histone-lysine N-methyltransferase setmar; SET dom 100.0
2r3a_A300 Histone-lysine N-methyltransferase SUV39H2; histon 100.0
3ooi_A232 Histone-lysine N-methyltransferase, H3 lysine-36 l 100.0
3h6l_A278 Histone-lysine N-methyltransferase SETD2; SET doma 100.0
3ope_A222 Probable histone-lysine N-methyltransferase ASH1L; 100.0
3q0b_X167 Histone-lysine N-methyltransferase, H3 lysine-9 S 100.0
3fde_A212 E3 ubiquitin-protein ligase UHRF1; SRA domain, bas 100.0
2pb7_A239 E3 ubiquitin-protein ligase UHRF1; beta barrel, NE 100.0
3oln_A231 E3 ubiquitin-protein ligase UHRF2; DNA-binding, me 100.0
2w5y_A192 Histone-lysine N-methyltransferase HRX; transcript 100.0
3f9x_A166 Histone-lysine N-methyltransferase SETD8; methyltr 99.97
2f69_A261 Histone-lysine N-methyltransferase, H3 lysine-4 sp 99.94
2qpw_A149 PR domain zinc finger protein 2; methyltransferase 99.91
1n3j_A119 A612L, histone H3 lysine methyltransferase; beta b 99.91
1h3i_A293 Histone H3 lysine 4 specific methyltransferase; 2. 99.91
3s8p_A273 Histone-lysine N-methyltransferase SUV420H1; SET d 99.89
3rq4_A247 Histone-lysine N-methyltransferase SUV420H2; suppr 99.82
3ep0_A170 PR domain zinc finger protein 12; PR domain-contai 99.74
3db5_A151 PR domain zinc finger protein 4; methyltransferase 99.71
3dal_A196 PR domain zinc finger protein 1; methyltransferase 99.69
3ray_A237 PR domain-containing protein 11; structural genomi 99.53
3ihx_A152 PR domain zinc finger protein 10; PRDM10, methyltr 99.33
3n71_A 490 Histone lysine methyltransferase SMYD1; heart deve 98.54
3qwp_A 429 SET and MYND domain-containing protein 3; SMYD3,SE 98.46
3qww_A 433 SET and MYND domain-containing protein 2; methyltr 98.33
3qxy_A 449 N-lysine methyltransferase SETD6; epigenetics, pro 95.58
2h21_A 440 Ribulose-1,5 bisphosphate carboxylase/oxygenase; S 94.04
3smt_A 497 Histone-lysine N-methyltransferase SETD3; histone 93.06
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* Back     alignment and structure
Probab=100.00  E-value=5.8e-60  Score=510.38  Aligned_cols=254  Identities=38%  Similarity=0.741  Sum_probs=222.1

Q ss_pred             cccccCceecccCCCCCccCeEEEeccCCCCCC-CCEEecccccCCCCCC----CCCCCCCCCCCCcCCCCccccccCCC
Q 048157          694 SKVREGLCVDDISQGKELIPICAVNTVDDEKPP-SFKYITNIIYPDWCRP----VPPKGCDCTNGCSELGKCACVAKNGG  768 (982)
Q Consensus       694 ~k~R~gli~~DIS~GkE~iPI~vvN~VDde~pP-~F~YI~~~iyp~~~~~----~p~~GCdC~~~C~d~~~C~C~~kngg  768 (982)
                      .+.|+++++.|||+|+|.+||+++|+||++.+| .|+||+++++......    .+..||+|.++|.+ ..|.|.+.+ .
T Consensus        24 ~~~~~~~~~~Dis~G~E~~pi~~~N~vD~~~~p~~f~Y~~~~~~~~~~~~~~~~~~~~gC~C~~~C~~-~~C~C~~~~-~  101 (287)
T 3hna_A           24 PSPVERIVSRDIARGYERIPIPCVNAVDSEPCPSNYKYVSQNCVTSPMNIDRNITHLQYCVCIDDCSS-SNCMCGQLS-M  101 (287)
T ss_dssp             CCCCCEEEESCTTTTCSSSCCCEEESSSSCCCCCSSEECSSCEESSCCCCCCBGGGCCCCCCSSSSCS-TTCHHHHHT-S
T ss_pred             ccccCCEEhHhhCCCCCCCCEEEEeCCCCCCCCCCcEEccccccCCCccccccCCCCCCCcCcCCCCC-CCCcCcccC-c
Confidence            456789999999999999999999999999755 7999998766442211    23479999999997 589999877 4


Q ss_pred             CcccCCCCceec-----cCCeeeccCCCCCCCCCCCCccccccceeeEEEEEcCCCceeEeeccccCCCCeEEEeceEec
Q 048157          769 ELPYNHNGAIVQ-----AKPLVYECGPSCKCPPSCYNRVSQQGIKFQLEIFKTEARGWGVRSLNSIPSGSFICEYAGELL  843 (982)
Q Consensus       769 ~~pYn~nG~Lv~-----~rplIyECgp~C~C~~sC~NRvvQrG~k~~LEVFrT~~KGWGVRA~e~IpaGtFIcEYvGEVI  843 (982)
                      .++|+.+|++..     .++++|||++.|+|++.|+||++|+|++.+|+||+|+.+||||||+++|++|+||+||+|||+
T Consensus       102 ~~~y~~~g~l~~~~~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi  181 (287)
T 3hna_A          102 RCWYDKDGRLLPEFNMAEPPLIFECNHACSCWRNCRNRVVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELI  181 (287)
T ss_dssp             SCCBCTTSCBCTTCCSSSCCCEECCCTTSSSCTTCSSCSGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEE
T ss_pred             ccccCCCCcccccccccCCceEEecCCCCCCCCCCCCcccCcCCcccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEc
Confidence            589999999864     467899999999999999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHhcCCCceeeccCCCCCCCCccCCccccCCCCCCCCCccccCCcEEEeccccCCcccccccCCCCCceeEEEEE
Q 048157          844 EEKEAERRTSNDEYLFDIGNNYNDGSLWGGLSNVMPDAPSSSCGVVEDGGFTIDAVEYGNVGRFVNHSCSPNLYAQNVLY  923 (982)
Q Consensus       844 t~eEae~R~~~d~YlFdl~~~~~~~~~w~~ls~~~pd~~~~s~~~~~d~~~vIDA~~~GNvARFINHSC~PN~~vq~V~v  923 (982)
                      +.++++.|. .+.|+|+++...                         ...++|||+.+||+||||||||+||+.++.|++
T Consensus       182 ~~~e~~~r~-~~~Y~f~l~~~~-------------------------~~~~~IDa~~~GN~aRFiNHSC~PN~~~~~v~~  235 (287)
T 3hna_A          182 SDSEADVRE-EDSYLFDLDNKD-------------------------GEVYCIDARFYGNVSRFINHHCEPNLVPVRVFM  235 (287)
T ss_dssp             EHHHHHTCS-CCTTEEESCCSS-------------------------SSCEEEEEEEEECGGGGCEECSSCSEEEEEEES
T ss_pred             cHHHHhhhc-ccceEEEeccCC-------------------------CceEEEeccccCCchheeeecCCCCceeEEEEE
Confidence            999998775 578999875321                         135899999999999999999999999999999


Q ss_pred             cCCCCcccEEEEEEccCCCCCCeEEEecCCCcccccccCCCCcCeeeecCCCCCccc
Q 048157          924 DHEDKRMPHIMLFAAENIPPLQELTYHYNYVIDQVYDSSGNIKKKSCFCGSSECTGR  980 (982)
Q Consensus       924 d~~d~~~PrIafFA~RDI~pGEELTfDYG~~~~~v~ds~G~ikk~~ClCGS~nCRG~  980 (982)
                      .+.+...++|+|||+|||++||||||||++.++....     +.+.|+|||++|||.
T Consensus       236 ~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~~~-----~~~~C~CGs~~CRgs  287 (287)
T 3hna_A          236 AHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIKG-----KLFSCRCGSPKCRHS  287 (287)
T ss_dssp             SCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHHHHT-----TTCCCCCCCTTCSCC
T ss_pred             ecCCCCceeEEEEEcceeCCCCeEEEeCCCcccccCC-----CcCEeeCCCCCCCCC
Confidence            8888889999999999999999999999987664321     358999999999985
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A Back     alignment and structure
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* Back     alignment and structure
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} Back     alignment and structure
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} Back     alignment and structure
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} Back     alignment and structure
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} Back     alignment and structure
>3q0b_X Histone-lysine N-methyltransferase, H3 lysine-9 S SUVH5; SRA, fully methylated CG, SUVH5, 5MC binding protein, fully methylated CG duplex DNA; HET: DNA 5CM; 2.20A {Arabidopsis thaliana} PDB: 3q0c_X* 3q0d_X* 3q0f_X* Back     alignment and structure
>3fde_A E3 ubiquitin-protein ligase UHRF1; SRA domain, base flipping, DNA CPG methylation, cell cycle, developmental protein, DNA damage; HET: 5CM; 1.41A {Mus musculus} SCOP: b.122.1.12 PDB: 2zo0_B* 2zo2_B* 3f8i_A* 2zo1_B* 3f8j_B* 2zkd_A* 2zke_A* 2zkf_A* 2zkg_A 3dwh_A 3bi7_A 3clz_A* Back     alignment and structure
>2pb7_A E3 ubiquitin-protein ligase UHRF1; beta barrel, NEW fold; 1.90A {Homo sapiens} SCOP: b.122.1.12 Back     alignment and structure
>3oln_A E3 ubiquitin-protein ligase UHRF2; DNA-binding, metal-binding, nucleus, phosphorylation transcription, transcription regulation; 2.30A {Homo sapiens} SCOP: b.122.1.12 Back     alignment and structure
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* Back     alignment and structure
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A* Back     alignment and structure
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* Back     alignment and structure
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* Back     alignment and structure
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Back     alignment and structure
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A Back     alignment and structure
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Back     alignment and structure
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Back     alignment and structure
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} Back     alignment and structure
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} Back     alignment and structure
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} Back     alignment and structure
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} Back     alignment and structure
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A* Back     alignment and structure
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A* Back     alignment and structure
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 982
d1ml9a_284 b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [T 4e-59
d1mvha_269 b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (S 2e-57
d2zkda1209 b.122.1.12 (A:405-613) E3 ubiquitin-protein ligase 2e-42
d2f69a2171 b.85.7.1 (A:194-364) Histone H3 K4-specific methyl 2e-26
d2g46a1119 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Meth 8e-14
>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} Length = 284 Back     information, alignment and structure

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: Dim-5
species: Fungus (Neurospora crassa) [TaxId: 5141]

 Score =  202 bits (513), Expect = 4e-59
 Identities = 78/291 (26%), Positives = 119/291 (40%), Gaps = 38/291 (13%)

Query: 712 IPICAVNTVDDEK-PPSFKYITNIIYPDWCRPVPPK---GCDCTNGCS-ELGKCACVAKN 766
           +PI  VN  DD    P+F++I + I              GC C +        C C+ + 
Sbjct: 2   LPISIVNREDDAFLNPNFRFIDHSIIGKNVPVADQSFRVGCSCASDEECMYSTCQCLDEM 61

Query: 767 GGE-------------LPYNHNGA--------IVQAKPLVYECGPSCKCPPSCYNRVSQQ 805
             +               Y   GA        ++Q++  +YEC   C C   C NRV ++
Sbjct: 62  APDSDEEADPYTRKKRFAYYSQGAKKGLLRDRVLQSQEPIYECHQGCACSKDCPNRVVER 121

Query: 806 GIKFQLEIFKTEARGWGVRSLNSIPSGSFICEYAGELLEEKEAERRTSNDEYLFDIGNNY 865
           G    L+IF+T+ RGWGV+   +I  G F+  Y GE++  +EA+RR +            
Sbjct: 122 GRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAESTI-----ARR 176

Query: 866 NDGSLWGGLSNVMPDAPSSSCGVVEDGGFTIDAVEYGNVGRFVNHSCSPNLYAQNVLYDH 925
            D  L+       PD+              +D        RF+NHSC PN+     + DH
Sbjct: 177 KDVYLFALDKFSDPDSLDPLL---AGQPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDH 233

Query: 926 EDKRMPHIMLFAAENIPPLQELTYHYNY----VIDQVYDSSGNIKKKSCFC 972
            DK +  + LFA ++IP   ELT+ Y      +    +D S   +   C C
Sbjct: 234 ADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISEMTKCLC 284
>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 269 Back     information, alignment and structure
>d2zkda1 b.122.1.12 (A:405-613) E3 ubiquitin-protein ligase UHRF1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 209 Back     information, alignment and structure
>d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 171 Back     information, alignment and structure
>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Length = 119 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query982
d1mvha_269 SET domain of Clr4 {Fission yeast (Schizosaccharom 100.0
d1ml9a_284 Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} 100.0
d2zkda1209 E3 ubiquitin-protein ligase UHRF1 {Mouse (Mus musc 100.0
d2f69a2171 Histone H3 K4-specific methyltransferase SET7/9 ca 99.92
d2g46a1119 Viral histone H3 Lysine 27 Methyltransferase {Para 99.83
d2h2ja2261 RuBisCo LSMT catalytic domain {Garden pea (Pisum s 97.78
>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: SET domain of Clr4
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.4e-51  Score=438.82  Aligned_cols=226  Identities=37%  Similarity=0.736  Sum_probs=191.6

Q ss_pred             CCCCccCeEEEeccCCCCCC--CCEEecccccCCCCCCC-C--CCCCCCCCC--C--cCCCCccccccC--CCCcccCCC
Q 048157          707 QGKELIPICAVNTVDDEKPP--SFKYITNIIYPDWCRPV-P--PKGCDCTNG--C--SELGKCACVAKN--GGELPYNHN  775 (982)
Q Consensus       707 ~GkE~iPI~vvN~VDde~pP--~F~YI~~~iyp~~~~~~-p--~~GCdC~~~--C--~d~~~C~C~~kn--gg~~pYn~n  775 (982)
                      .+.|..||+++|+||++.+|  .|+||++++++...... +  ..||+|...  |  .+...|.|...+  +..++|+.+
T Consensus        22 ~~~~~~pi~~~N~vD~~~~P~~~F~yi~~~~~~~~~~~~~~~~~~gC~C~~~~~C~~~~~~~C~C~~~~~~~~~~~~~~~  101 (269)
T d1mvha_          22 REIEGPEVTLVNEVDDEPCPSLDFQFISQYRLTQGVIPPDPNFQSGCNCSSLGGCDLNNPSRCECLDDLDEPTHFAYDAQ  101 (269)
T ss_dssp             HTSSSSCEEEECSSCCCCCSCCCSEECSSCEECTTCCCCCGGGCCCCCCCCSSSSCTTCTTTCSSSTTCCSSCCCSBCTT
T ss_pred             hhCCCCCcEEEeCCCCCCCCCCCcEEeeccccCCCCCcCCccccCCCCCCCCCCcCCCCCcceecccccCCCCccccccC
Confidence            34578899999999999755  59999999887643222 1  479999763  3  445679998764  457899988


Q ss_pred             Cce-eccCCeeeccCCCCCCCCCCCCccccccceeeEEEEEcCCCceeEeeccccCCCCeEEEeceEeccHHHHHHhcC-
Q 048157          776 GAI-VQAKPLVYECGPSCKCPPSCYNRVSQQGIKFQLEIFKTEARGWGVRSLNSIPSGSFICEYAGELLEEKEAERRTS-  853 (982)
Q Consensus       776 G~L-v~~rplIyECgp~C~C~~sC~NRvvQrG~k~~LEVFrT~~KGWGVRA~e~IpaGtFIcEYvGEVIt~eEae~R~~-  853 (982)
                      |++ +..+.+||||++.|+|+.+|.||++|+|++.+|+||+|+.+||||||+++|++|+||+||+||||+..++++|.. 
T Consensus       102 ~rl~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~~~leV~~t~~~G~GvfA~~~I~kGt~I~eY~Gevi~~~e~~~R~~~  181 (269)
T d1mvha_         102 GRVRADTGAVIYECNSFCSCSMECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKN  181 (269)
T ss_dssp             SSBCTTCCSEEECCCTTSCSCTTCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTT
T ss_pred             CccccCcCCeEEECCCCCCCCCCCCCeecCCCCccCEEEEEcCCCCeEEEeCcccCCCceEEEecceEEcHHHHHHHHHh
Confidence            887 467789999999999999999999999999999999999999999999999999999999999999999988753 


Q ss_pred             ----CCceeeccCCCCCCCCccCCccccCCCCCCCCCccccCCcEEEeccccCCcccccccCCCCCceeEEEEEcCCCCc
Q 048157          854 ----NDEYLFDIGNNYNDGSLWGGLSNVMPDAPSSSCGVVEDGGFTIDAVEYGNVGRFVNHSCSPNLYAQNVLYDHEDKR  929 (982)
Q Consensus       854 ----~d~YlFdl~~~~~~~~~w~~ls~~~pd~~~~s~~~~~d~~~vIDA~~~GNvARFINHSC~PN~~vq~V~vd~~d~~  929 (982)
                          ...|+|++...                        .....++|||+.+||+||||||||+|||.++.|++++.+..
T Consensus       182 y~~~~~~~~~~l~~~------------------------~~~~~~~iDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~~~~  237 (269)
T d1mvha_         182 YDDDGITYLFDLDMF------------------------DDASEYTVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRT  237 (269)
T ss_dssp             CCSCSCCCEEEECSS------------------------CSSSCEEEECSSEECGGGGCEECSSCSEEEEEEESCTTCTT
T ss_pred             HhhcCCcchhheecc------------------------cccccceeeeeecCcceEEeecCCCCCcEEEEEEecCCcCc
Confidence                12455554211                        11346899999999999999999999999999999999999


Q ss_pred             ccEEEEEEccCCCCCCeEEEecCCCcc
Q 048157          930 MPHIMLFAAENIPPLQELTYHYNYVID  956 (982)
Q Consensus       930 ~PrIafFA~RDI~pGEELTfDYG~~~~  956 (982)
                      .|||+|||+|||+||||||||||+..+
T Consensus       238 ~~~i~~fA~rdI~~GEELt~DYG~~~d  264 (269)
T d1mvha_         238 IYDLAFFAIKDIQPLEELTFDYAGAKD  264 (269)
T ss_dssp             SCEEEEEESSCBCTTCBCEECCCTTSS
T ss_pred             cceEEEEECCccCCCCEEEEecCCCcC
Confidence            999999999999999999999998765
>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} Back     information, alignment and structure
>d2zkda1 b.122.1.12 (A:405-613) E3 ubiquitin-protein ligase UHRF1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Back     information, alignment and structure
>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure