Citrus Sinensis ID: 048169


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-----
MLKLLWLFHIFFLCFLGFTGAGQESIELLYVYDSTPELLPAASHSGLPLAVPVSEKNLDEISSSVIMAESWLRTYVLPHYPATKITTIVVGNNLFCQKQQDHNLGLILPSLKNMYHSLKRWGLENEIKVSPAFSSSCFIPDLTLFRDDLIKQVIKPLLQFLHTANSTYSIIPPPKLSPLSDKTTIFASSYLESMKKLGFLTVNKINVLIQNPKGTKPTSRKLSAEVIDTKIINPYPARPTPLPEITPIHSSIGFSIPAHAAKTPQSPQPYSAPAP
cccHHHHHHHHHHHHHHHcccccccccEEEEccccHHHHHHHcccccEEEEccccccHHHHHccHHHHHHHHHHcccccccccEEEEEEccccccccccccccccccccHHHHHHHHHHHccccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEccccccccccccccHHHHHHHHHHHccccccccccEEEEccccccHHHHHHHHcccccEEEEcccccccccccccccEEEEcccccccccccccccccccccccc
ccHHHHHHHEEEEEEccccccccccccEEEEEcccHHHHHHHHccccEEEEEcccHHHHHHHccHHHHHHHHHHHHHHcccccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEcEEEEccccccccHHHHHcccccccEEEEcccccEEEcccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccHHHHHHHccccc
MLKLLWLFHIFFLCflgftgagqESIELLYvydstpellpaashsglplavpvseknldeiSSSVIMAESWLRtyvlphypatkiTTIVVGNnlfcqkqqdhnlgliLPSLKNMYHSLKRwgleneikvspafssscfipdltlfRDDLIKQVIKPLLQFLHTanstysiipppklsplsdktTIFASSYLESMKKLGFLTVNKINVLiqnpkgtkptsrklsaevidtkiinpyparptplpeitpihssigfsipahaaktpqspqpysapap
MLKLLWLFHIFFLCFLGFTGAGQESIELLYVYDSTPELLPAASHSGLPLAVPVSEKNLDEISSSVIMAESWLRTYVLPHYPATKITTIVVGNNLFCQKQQDHNLGLILPSLKNMYHSLKRWGLENEIKVSPAFSSSCFIPDLTLFRDDLIKQVIKPLLQFLHTANSTYsiipppklsplsDKTTIFASSYLESMKKLGFLTVNKINVliqnpkgtkptsrklsaevidtkiinpyparptplPEITPIHSSIGFSIPAHAaktpqspqpysapap
MLKLLWLFHIFFLCFLGFTGAGQESIELLYVYDSTPELLPAASHSGLPLAVPVSEKNLDEISSSVIMAESWLRTYVLPHYPATKITTIVVGNNLFCQKQQDHNLGLILPSLKNMYHSLKRWGLENEIKVSPAFSSSCFIPDLTLFRDDLIKQVIKPLLQFLHTANSTYsiipppklsplsDKTTIFASSYLESMKKLGFLTVNKINVLIQNPKGTKPTSRKLSAEVIDTKIINPYPARPTPLPEITPIHSSIGFSIPAHAAKTpqspqpysapap
**KLLWLFHIFFLCFLGFTGAGQESIELLYVYDSTPELLPAASHSGLPLAVPVSEKNLDEISSSVIMAESWLRTYVLPHYPATKITTIVVGNNLFCQKQQDHNLGLILPSLKNMYHSLKRWGLENEIKVSPAFSSSCFIPDLTLFRDDLIKQVIKPLLQFLHTANSTYSIIPPPKLSPLSDKTTIFASSYLESMKKLGFLTVNKINVLIQN*************EVIDTKIINPY****************************************
****LWLFHIFFLCFLGFTGAGQESIELLYVYDSTPELLPAASHSGLPLAVPVSEKNLDEISSSVIMAESWLRTYVLPHYPATKITTIVVGNNLFCQKQQDHNLGLILPSLKNMYHSLKRWGLENEIKVSPAFSSSCFIPDLTLFRDDLIKQVIKPLLQFLHTANSTYSIIPPPKLSPLSDKTTIFASSYLESMKKLGFLTVNKINVLIQNPKGTKPTSRKLSAEVIDTKIINPYPARPTPLPEITPIHSSIGFSIPAHAAKTPQ**********
MLKLLWLFHIFFLCFLGFTGAGQESIELLYVYDSTPELLPAASHSGLPLAVPVSEKNLDEISSSVIMAESWLRTYVLPHYPATKITTIVVGNNLFCQKQQDHNLGLILPSLKNMYHSLKRWGLENEIKVSPAFSSSCFIPDLTLFRDDLIKQVIKPLLQFLHTANSTYSIIPPPKLSPLSDKTTIFASSYLESMKKLGFLTVNKINVLIQNP*********LSAEVIDTKIINPYPARPTPLPEITPIHSSIGFSIPAHA***************
MLKLLWLFHIFFLCFLGFTGAGQESIELLYVYDSTPELLPAASHSGLPLAVPVSEKNLDEISSSVIMAESWLRTYVLPHYPATKITTIVVGNNLFCQKQQDHNLGLILPSLKNMYHSLKRWGLENEIKVSPAFSSSCFIPDLTLFRDDLIKQVIKPLLQFLHTANSTYSIIPPPKLSPLSDKTTIFASSYLESMKKLGFLTVNKINVLIQNPKGTKPTSRKLSAEVIDTKIINPYPARPTPLPEITPIHSSIGFSIPA*AAKTPQ**********
iiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLKLLWLFHIFFLCFLGFTGAGQESIELLYVYDSTPELLPAASHSGLPLAVPVSEKNLDEISSSVIMAESWLRTYVLPHYPATKITTIVVGNNLFCQKQQDHNLGLILPSLKNMYHSLKRWGLENEIKVSPAFSSSCFIPDLTLFRDDLIKQVIKPLLQFLHTANSTYSIIPPPKLSPLSDKTTIFASSYLESMKKLGFLTVNKINVLIQNPKGTKPTSRKLSAEVIDTKIINPYPARPTPLPEITPIHSSIGFSIPAHAAKTPQSPQPYSAPAP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query275 2.2.26 [Sep-21-2011]
Q06915 478 Probable glucan endo-1,3- no no 0.494 0.284 0.316 1e-13
Q8VYE5 534 Glucan endo-1,3-beta-gluc no no 0.490 0.252 0.307 4e-13
Q9ZQG9392 Glucan endo-1,3-beta-gluc no no 0.483 0.339 0.333 7e-13
Q9FJU9 506 Glucan endo-1,3-beta-gluc no no 0.52 0.282 0.296 1e-11
P23535348 Glucan endo-1,3-beta-gluc N/A no 0.516 0.408 0.265 5e-10
Q9C7U5 505 Glucan endo-1,3-beta-gluc no no 0.512 0.279 0.294 1e-09
Q9M069 504 Glucan endo-1,3-beta-gluc no no 0.563 0.307 0.279 1e-09
Q9FHX5 425 Glucan endo-1,3-beta-gluc no no 0.461 0.298 0.320 2e-09
Q9ZU91 501 Glucan endo-1,3-beta-gluc no no 0.512 0.281 0.308 3e-09
Q03467370 Glucan endo-1,3-beta-gluc N/A no 0.516 0.383 0.265 4e-09
>sp|Q06915|EA6_ARATH Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1 Back     alignment and function desciption
 Score = 77.0 bits (188), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 81/142 (57%), Gaps = 6/142 (4%)

Query: 31  VYDSTPELLPAASHSGLPLAVPVSEKNLDEISSSVIMAESWLRTYVLPHYPATKITTIVV 90
           +YD+ PE L   S + L + + V    +  +SS+  +A+ W+RT +LP+YP T+I  ++V
Sbjct: 73  LYDADPESLTLLSQTNLYVTITVPNHQITALSSNQTIADEWVRTNILPYYPQTQIRFVLV 132

Query: 91  GNNLFCQKQQDHNLGLILPSLKNMYHSLKRWGLENEIKVSPAFS----SSCFIPDLTLFR 146
           GN +      + ++ L+ P+++ + +SL+  G+ N IKV    +     S F P    FR
Sbjct: 133 GNEILSYNSGNVSVNLV-PAMRKIVNSLRLHGIHN-IKVGTPLAMDSLRSSFPPSNGTFR 190

Query: 147 DDLIKQVIKPLLQFLHTANSTY 168
           +++   V+ PLL+FL+  NS +
Sbjct: 191 EEITGPVMLPLLKFLNGTNSYF 212




Implicated in the defense of plants against pathogens.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 3EC: 9
>sp|Q8VYE5|E1312_ARATH Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZQG9|E1314_ARATH Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500 PE=1 SV=2 Back     alignment and function description
>sp|Q9FJU9|E1313_ARATH Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1 Back     alignment and function description
>sp|P23535|E13B_PHAVU Glucan endo-1,3-beta-glucosidase, basic isoform OS=Phaseolus vulgaris PE=2 SV=1 Back     alignment and function description
>sp|Q9C7U5|E132_ARATH Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2 Back     alignment and function description
>sp|Q9M069|E137_ARATH Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2 Back     alignment and function description
>sp|Q9FHX5|E1310_ARATH Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZU91|E133_ARATH Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2 Back     alignment and function description
>sp|Q03467|E13B_PEA Glucan endo-1,3-beta-glucosidase OS=Pisum sativum PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query275
225438988 413 PREDICTED: probable glucan endo-1,3-beta 0.945 0.629 0.588 7e-80
255568579 431 Glucan endo-1,3-beta-glucosidase precurs 0.927 0.591 0.583 3e-77
359482687 388 PREDICTED: uncharacterized protein LOC10 0.847 0.600 0.550 9e-64
356496979 395 PREDICTED: glucan endo-1,3-beta-glucosid 0.858 0.597 0.510 2e-59
296087326357 unnamed protein product [Vitis vinifera] 0.650 0.501 0.613 4e-56
356541643 398 PREDICTED: glucan endo-1,3-beta-glucosid 0.814 0.562 0.517 1e-55
388500240 417 unknown [Medicago truncatula] 0.92 0.606 0.444 9e-54
357482629 417 Glucan endo-1,3-beta-glucosidase [Medica 0.92 0.606 0.440 3e-53
407947994 393 beta-1,3-glucanase 19 [Solanum tuberosum 0.810 0.567 0.445 4e-42
297794231 382 glycosyl hydrolase family protein 17 [Ar 0.869 0.625 0.444 4e-39
>gi|225438988|ref|XP_002279597.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  303 bits (775), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 157/267 (58%), Positives = 200/267 (74%), Gaps = 7/267 (2%)

Query: 1   MLKLLWLFHI--FFLCFLGFTGAGQESIELLYVYDSTPELLPAASHSGLPLAVPVSEKNL 58
           MLK+  LFHI  FFL FL  TG+  ES+ELL +YDS+P +L A SH+G+P+AV VSE +L
Sbjct: 1   MLKMGSLFHIIIFFLTFLVLTGSSSESVELLTLYDSSPVVLQAMSHTGVPIAVSVSEDDL 60

Query: 59  DEISSSVIMAESWLRTYVLPHYPATKITTIVVGNNLFCQKQQDHNLGLILPSLKNMYHSL 118
           +E+S SV+MAESW+RT+VL HYP+T ITTIVVGN + C K ++  L L+LPSL+N+Y+SL
Sbjct: 61  NEVSGSVLMAESWIRTHVLAHYPSTNITTIVVGNTVLCNKDKEDKLRLVLPSLRNVYYSL 120

Query: 119 KRWGLENEIKVSPAFSSSCFIPDLTLFRDDLIKQVIKPLLQFLHTANSTYSIIPPPKLSP 178
            RWGLE +IKVS AFSS+C  PD  L RDDL  +VIKPLL FL   NSTYS+ PP   SP
Sbjct: 121 TRWGLEKDIKVSAAFSSNCLNPDSVLDRDDLADKVIKPLLSFLELTNSTYSVHPPTNFSP 180

Query: 179 LSDKTTIFASSYLESMKKLGFLTVNKINVLIQNPKGTKPTSRKLSAEVIDTKIINPYPAR 238
           LSD++    SS+ ESMKKLG   + ++NV++Q+ K  KP SRKLS   + +K + PYPAR
Sbjct: 181 LSDESAGLVSSHSESMKKLGTSKL-RVNVIVQSAKEGKPQSRKLS--FMHSKFVEPYPAR 237

Query: 239 PTPLPEI--TPIHSSIGFSIPAHAAKT 263
           PTPLPE+  +PI+SSIGFS PA+ AK 
Sbjct: 238 PTPLPELSPSPIYSSIGFSAPANVAKN 264




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568579|ref|XP_002525263.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] gi|223535421|gb|EEF37091.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359482687|ref|XP_003632808.1| PREDICTED: uncharacterized protein LOC100853214 [Vitis vinifera] gi|297743428|emb|CBI36295.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356496979|ref|XP_003517342.1| PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Glycine max] Back     alignment and taxonomy information
>gi|296087326|emb|CBI33700.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356541643|ref|XP_003539283.1| PREDICTED: glucan endo-1,3-beta-glucosidase 13-like [Glycine max] Back     alignment and taxonomy information
>gi|388500240|gb|AFK38186.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357482629|ref|XP_003611601.1| Glucan endo-1,3-beta-glucosidase [Medicago truncatula] gi|355512936|gb|AES94559.1| Glucan endo-1,3-beta-glucosidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|407947994|gb|AFU52652.1| beta-1,3-glucanase 19 [Solanum tuberosum] Back     alignment and taxonomy information
>gi|297794231|ref|XP_002865000.1| glycosyl hydrolase family protein 17 [Arabidopsis lyrata subsp. lyrata] gi|297310835|gb|EFH41259.1| glycosyl hydrolase family protein 17 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query275
TAIR|locus:2158571 380 AT5G67460 [Arabidopsis thalian 0.872 0.631 0.428 5.3e-40
TAIR|locus:2098585 460 AT3G07320 [Arabidopsis thalian 0.487 0.291 0.314 1.5e-17
TAIR|locus:2129376 478 MEE48 "maternal effect embryo 0.494 0.284 0.338 6.5e-16
TAIR|locus:2118339 534 AT4G29360 [Arabidopsis thalian 0.487 0.250 0.326 1e-14
TAIR|locus:2038583392 AT2G27500 [Arabidopsis thalian 0.483 0.339 0.333 1e-14
TAIR|locus:2056519 472 AT2G05790 [Arabidopsis thalian 0.509 0.296 0.304 4.5e-14
TAIR|locus:2161710 465 AT5G55180 [Arabidopsis thalian 0.512 0.303 0.299 9.1e-14
TAIR|locus:2095228 476 AT3G23770 [Arabidopsis thalian 0.498 0.287 0.326 1.2e-13
TAIR|locus:2116327 455 AT4G26830 [Arabidopsis thalian 0.509 0.307 0.292 1.4e-13
TAIR|locus:2141867397 AT4G18340 [Arabidopsis thalian 0.487 0.337 0.300 4.8e-12
TAIR|locus:2158571 AT5G67460 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 113/264 (42%), Positives = 147/264 (55%)

Query:     1 MLKLLWLFHIFFLCFLGFTGAGQES--IELLYVYDSTPELLPAASHSGLPLAVPVS-EKN 57
             M  LL++F   F+ FL F GAGQES  IE L + ++   LL     + L LAV VS  K 
Sbjct:     1 MRHLLYIF--LFIAFLSFAGAGQESTPIEALNLNNN---LLQLPQTTDLDLAVSVSGNKT 55

Query:    58 LDEISSSVIMAESWLRTYVLPHYPATKITTIVVGNNLFCQKQQDHNLGLILPSLKNMYHS 117
             + EISSS+I AE+WL+T++L  YP+TKITTIV+     CQ  Q H+  L+L SLKN+YHS
Sbjct:    56 ITEISSSIIKAETWLKTHILSRYPSTKITTIVIFFPDSCQTTQ-HSSDLVLSSLKNIYHS 114

Query:   118 LKRWGLENEIKVSPAFSSSCFIPDLTLFRDDLIKQVIKPLLQFLHTANSTYXXXXXXXXX 177
             L RWGLEN IKVS  FS  C         +    ++ KP+L FL T NST+         
Sbjct:   115 LTRWGLENNIKVSSGFSYQCL-------NNPKSSEMFKPVLIFLKTINSTFTINPPQNFL 167

Query:   178 XXXDKTTIFASSYLESMKKLGFLTVNKINVLIQNPKG---TKPTSRKLSAEV-IDTKIIN 233
                          L S++KLG L+ NK+N L   P+    T  T R L + V + +K   
Sbjct:   168 TSPHNHR----DLLHSVEKLGSLSFNKVNFLNPEPEQESTTTMTRRNLRSLVNLSSKFTT 223

Query:   234 PYPARPTPLPEITPIHSSIGFSIP 257
              +P  P+P PE +PIHSSIG   P
Sbjct:   224 SFPTLPSPSPETSPIHSSIGSPSP 247




GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
TAIR|locus:2098585 AT3G07320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129376 MEE48 "maternal effect embryo arrest 48" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118339 AT4G29360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038583 AT2G27500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056519 AT2G05790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161710 AT5G55180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095228 AT3G23770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116327 AT4G26830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141867 AT4G18340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.39LOW CONFIDENCE prediction!
3rd Layer3.2.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query275
pfam00332310 pfam00332, Glyco_hydro_17, Glycosyl hydrolases fam 6e-14
>gnl|CDD|215863 pfam00332, Glyco_hydro_17, Glycosyl hydrolases family 17 Back     alignment and domain information
 Score = 70.1 bits (172), Expect = 6e-14
 Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 9/140 (6%)

Query: 31  VYDSTPELLPAASHSGLPLAVPVSEKNLDEISSSVIMAESWLRTYVLPHYPATKITTIVV 90
           +YD   + L A   SG+ + + V   +L E++ S   A SW++  V P+ P  KI  I V
Sbjct: 32  IYDPDTKALKALRGSGINVILGVPNDDLAELAGSQSNAASWVQDNVRPYAPKVKIRYIAV 91

Query: 91  GNNLFCQKQQDHNLGLILPSLKNMYHSLKRWGLENEIKVSPAFSS----SCFIPDLTLFR 146
           GN +     Q      ++P+++N+ ++L   GL N+IKVS +       + F P    FR
Sbjct: 92  GNEVSPGTTQ----SFLVPAMRNIRNALTAAGLGNKIKVSTSVRFDILGNSFPPSYGSFR 147

Query: 147 DDLIKQVIKPLLQFLHTANS 166
            +  +  + P++ FL   N+
Sbjct: 148 VE-TRSFMDPIIVFLAGTNA 166


Length = 310

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 275
PF00332310 Glyco_hydro_17: Glycosyl hydrolases family 17; Int 100.0
COG5309305 Exo-beta-1,3-glucanase [Carbohydrate transport and 97.73
PF03198314 Glyco_hydro_72: Glucanosyltransferase; InterPro: I 93.58
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3 Back     alignment and domain information
Probab=100.00  E-value=1e-53  Score=400.21  Aligned_cols=208  Identities=31%  Similarity=0.533  Sum_probs=171.5

Q ss_pred             cccccCCCeEEeecCChhhhhhccCCCccEEeecCccchHhhhcChHHHHHHHHhhccCCCCCccEEEEeecccccccCC
Q 048169           20 GAGQESIELLYVYDSTPELLPAASHSGLPLAVPVSEKNLDEISSSVIMAESWLRTYVLPHYPATKITTIVVGNNLFCQKQ   99 (275)
Q Consensus        20 ~~ks~~I~~VRLyDad~~vL~AlagTgI~V~VgVpN~~L~~lAss~~aA~~WV~~NV~py~P~t~I~~IaVGNEVl~~~~   99 (275)
                      ++|+++|++|||||+|+++|+||+||||+|+|+|||++|+++|+++.+|..||++||.||+|+|+|++|+||||++++..
T Consensus        21 l~ks~~i~~vri~d~~~~iL~a~a~S~i~v~v~vpN~~l~~la~~~~~A~~Wv~~nv~~~~~~~~i~~i~VGnEv~~~~~  100 (310)
T PF00332_consen   21 LLKSNGITKVRIYDADPSILRAFAGSGIEVMVGVPNEDLASLASSQSAAGSWVRTNVLPYLPAVNIRYIAVGNEVLTGTD  100 (310)
T ss_dssp             HHHHTT--EEEESS--HHHHHHHTTS--EEEEEE-GGGHHHHHHHHHHHHHHHHHHTCTCTTTSEEEEEEEEES-TCCSG
T ss_pred             HHHhcccccEEeecCcHHHHHHHhcCCceeeeccChHHHHHhccCHHHHhhhhhhcccccCcccceeeeecccccccCcc
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999998643


Q ss_pred             CcccchhhHHHHHHHHHHHHhcCCCCceEEecCccCCC----CCCCccccchhhhhhhHHHHHHHHhhcCCceEecCCCC
Q 048169          100 QDHNLGLILPSLKNMYHSLKRWGLENEIKVSPAFSSSC----FIPDLTLFRDDLIKQVIKPLLQFLHTANSTYSIIPPPK  175 (275)
Q Consensus       100 ~~~~~~~LvPAM~NI~~AL~~~GL~~~IKVST~~s~~v----yPPSaG~F~~d~~~~vm~piL~FL~~tgSPfmVNvYPy  175 (275)
                          ...|||||+|+|+||+++||+++|||||+|++++    ||||+|.|++++. .+|+|+++||++||||||+|+|||
T Consensus       101 ----~~~lvpAm~ni~~aL~~~~L~~~IkVst~~~~~vl~~s~PPS~g~F~~~~~-~~~~~~l~fL~~t~spf~vN~yPy  175 (310)
T PF00332_consen  101 ----NAYLVPAMQNIHNALTAAGLSDQIKVSTPHSMDVLSNSFPPSAGVFRSDIA-SVMDPLLKFLDGTNSPFMVNVYPY  175 (310)
T ss_dssp             ----GGGHHHHHHHHHHHHHHTT-TTTSEEEEEEEGGGEEE-SSGGG-EESHHHH-HHHHHHHHHHHHHT--EEEE--HH
T ss_pred             ----ceeeccHHHHHHHHHHhcCcCCcceeccccccccccccCCCccCcccccch-hhhhHHHHHhhccCCCceeccchh
Confidence                2279999999999999999999999999999999    9999999999998 899999999999999999999999


Q ss_pred             CccCCCCCccc--------------------------cchHHHHHHHhCCCCCCeeEEEecC------------CCCCcc
Q 048169          176 LSPLSDKTTIF--------------------------ASSYLESMKKLGFLTVNKINVLIQN------------PKGTKP  217 (275)
Q Consensus       176 Fay~~np~~i~--------------------------lD~~~~amkk~G~~~~n~in~~~~~------------~~~~~~  217 (275)
                      |+|.+||..++                          +|.++.+|+|+|+.+   +.|+|+|            .+.+++
T Consensus       176 fa~~~~~~~~~l~yAlf~~~~~~~D~~~~y~nlfDa~~da~~~a~~~~g~~~---~~vvv~ETGWPs~G~~~a~~~nA~~  252 (310)
T PF00332_consen  176 FAYQNNPQNISLDYALFQPNSGVVDGGLAYTNLFDAMVDAVYAAMEKLGFPN---VPVVVGETGWPSAGDPGATPENAQA  252 (310)
T ss_dssp             HHHHHSTTTS-HHHHTT-SSS-SEETTEEESSHHHHHHHHHHHHHHTTT-TT-----EEEEEE---SSSSTTCSHHHHHH
T ss_pred             hhccCCcccCCcccccccccccccccchhhhHHHHHHHHHHHHHHHHhCCCC---ceeEEeccccccCCCCCCCcchhHH
Confidence            99999988873                          566679999999976   8999981            122578


Q ss_pred             cccchhhhhhccccCCCCCCCCC
Q 048169          218 TSRKLSAEVIDTKIINPYPARPT  240 (275)
Q Consensus       218 ~~r~l~~~~~~~~~~~~~p~~p~  240 (275)
                      ++++|++.+.     ..+|.||.
T Consensus       253 ~~~nl~~~~~-----~gt~~~~~  270 (310)
T PF00332_consen  253 YNQNLIKHVL-----KGTPLRPG  270 (310)
T ss_dssp             HHHHHHHHCC-----GBBSSSBS
T ss_pred             HHHHHHHHHh-----CCCcccCC
Confidence            8899985554     56777775



2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.

>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query275
2cyg_A312 Crystal Structure At 1.45- Resolution Of The Major 9e-10
4gzi_A323 Active-site Mutant Of Potato Endo-1,3-beta-glucanas 7e-09
3em5_A316 Crystal Structure Of A Native Endo Beta-1,3-Glucana 7e-09
3ur7_A323 Higher-density Crystal Structure Of Potato Endo-1,3 8e-09
1ghs_A306 The Three-Dimensional Structures Of Two Plant Beta- 3e-07
>pdb|2CYG|A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome Length = 312 Back     alignment and structure

Iteration: 1

Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 8/144 (5%) Query: 24 ESIELLYVYDSTPELLPAASHSGLPLAVPVSEKNLDEISSSVIMAESWLRTYVLPHYPAT 83 +I + +YD L A +S + + + V ++ ++S+ A W+R V+ ++P+ Sbjct: 25 NNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQSLASNPSAAGDWIRRNVVAYWPSV 84 Query: 84 KITTIVVGNNLFCQKQQDHNLGLILPSLKNMYHSLKRWGLENEIKVSPAFSS----SCFI 139 I VGN L ILP+++N+Y++L GL+N+IKVS A + + + Sbjct: 85 SFRYIAVGNELIPGSDLAQ---YILPAMRNIYNALSSAGLQNQIKVSTAVDTGVLGTSYP 141 Query: 140 PDLTLFRDDLIKQVIKPLLQFLHT 163 P F + + P++QFL + Sbjct: 142 PSAGAF-SSAAQAYLSPIVQFLAS 164
>pdb|4GZI|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose Length = 323 Back     alignment and structure
>pdb|3EM5|A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis Length = 316 Back     alignment and structure
>pdb|3UR7|A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase Length = 323 Back     alignment and structure
>pdb|1GHS|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities Length = 306 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query275
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 9e-22
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 1e-21
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 2e-21
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 2e-20
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 1e-17
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Length = 312 Back     alignment and structure
 Score = 91.4 bits (226), Expect = 9e-22
 Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 8/165 (4%)

Query: 31  VYDSTPELLPAASHSGLPLAVPVSEKNLDEISSSVIMAESWLRTYVLPHYPATKITTIVV 90
           +YD     L A  +S + + + V   ++  ++S+   A  W+R  V+ ++P+     I V
Sbjct: 32  LYDPNQAALQALRNSNIQVLLDVPRSDVQSLASNPSAAGDWIRRNVVAYWPSVSFRYIAV 91

Query: 91  GNNLFCQKQQDHNLGLILPSLKNMYHSLKRWGLENEIKVSPAFSSSC----FIPDLTLFR 146
           GN L            ILP+++N+Y++L   GL+N+IKVS A  +      + P    F 
Sbjct: 92  GNELIP---GSDLAQYILPAMRNIYNALSSAGLQNQIKVSTAVDTGVLGTSYPPSAGAFS 148

Query: 147 DDLIKQVIKPLLQFLHTANSTYSIIPPPKLSPLSDKTTIFASSYL 191
               +  + P++QFL +  +   +   P  S   +   I     L
Sbjct: 149 SA-AQAYLSPIVQFLASNGAPLLVNVYPYFSYTGNPGQISLPYAL 192


>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Length = 306 Back     alignment and structure
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Length = 323 Back     alignment and structure
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} PDB: 3f55_A* Length = 316 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Length = 306 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query275
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 100.0
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 100.0
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 100.0
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 100.0
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 100.0
2w61_A 555 GAS2P, glycolipid-anchored surface protein 2; glyc 99.31
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 92.79
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 92.79
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 90.34
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 88.18
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 88.11
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 87.47
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 87.23
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 86.43
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 85.69
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 83.14
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 82.53
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 80.3
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* Back     alignment and structure
Probab=100.00  E-value=5.3e-58  Score=429.53  Aligned_cols=211  Identities=21%  Similarity=0.347  Sum_probs=189.8

Q ss_pred             ccccccCCCeEEeecCChhhhhhccCCCccEEeecCccchHhhhcChHHHHHHHHhhccCCCCCccEEEEeecccccccC
Q 048169           19 TGAGQESIELLYVYDSTPELLPAASHSGLPLAVPVSEKNLDEISSSVIMAESWLRTYVLPHYPATKITTIVVGNNLFCQK   98 (275)
Q Consensus        19 ~~~ks~~I~~VRLyDad~~vL~AlagTgI~V~VgVpN~~L~~lAss~~aA~~WV~~NV~py~P~t~I~~IaVGNEVl~~~   98 (275)
                      .++|++||++|||||+|+++|+||+||||+|+|||+|+++++++ ++++|.+||++||.+|+|.++|++|+||||++...
T Consensus        21 ~llks~gi~~VRlYdaD~~vL~Al~~sgi~v~vGV~n~~l~~la-~~~~A~~WV~~nV~~y~p~~~I~~IaVGNEvl~~~   99 (316)
T 3em5_A           21 ALYKKSNITRMRIYDPNQAVLEALRGSNIELILGVPNSDLQSLT-NPSNAKSWVQKNVRGFWSSVRFRYIAVGNEISPVN   99 (316)
T ss_dssp             HHHHHTTCCEEECSSCCHHHHHHHTTCCCEEEEEECGGGHHHHT-SHHHHHHHHHHHTGGGTTTSCEEEEEEEESCCTTC
T ss_pred             HHHHHcCCCEEEEecCCHHHHHHhhcCCceEEEecccchhhhcc-CHHHHHHHHHHhhhhcCCCceEEEEEEecccccCC
Confidence            45799999999999999999999999999999999999999999 99999999999999999999999999999999763


Q ss_pred             CC--cccchhhHHHHHHHHHHHHhcCCCCceEEecCccCCC----CCCCccccchhhhhhhHHHHHHHHhhcCCceEecC
Q 048169           99 QQ--DHNLGLILPSLKNMYHSLKRWGLENEIKVSPAFSSSC----FIPDLTLFRDDLIKQVIKPLLQFLHTANSTYSIIP  172 (275)
Q Consensus        99 ~~--~~~~~~LvPAM~NI~~AL~~~GL~~~IKVST~~s~~v----yPPSaG~F~~d~~~~vm~piL~FL~~tgSPfmVNv  172 (275)
                      +.  .+ +..|+|||+|||+||+++||+++|||||++++++    ||||+|.||+|+. ++|+|||+||++||||||||+
T Consensus       100 ~~t~~~-~~~LvpAm~nv~~AL~~aGL~~~IkVsT~~s~~vl~~s~pPS~g~F~~~~~-~~~~pil~fL~~~~sp~~vN~  177 (316)
T 3em5_A          100 RGTAWL-AQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVR-SYLNPIIRFLSSIRSPLLANI  177 (316)
T ss_dssp             TTTGGG-HHHHHHHHHHHHHHHHHTTCTTTSEEEEEECTTSEEECSSGGGCEECGGGH-HHHHHHHHHHHHTTCCEEEEC
T ss_pred             CccccC-HHHHHHHHHHHHHHHHHCCCCCceEEEecccccccccCCCCCCceechhHH-HHHHHHHHHHHhcCCeeEeec
Confidence            31  12 5789999999999999999999999999999999    9999999999998 899999999999999999999


Q ss_pred             CCCCccCCCCCccccc---------------------------hHHHHHHHhCCCCCCeeEEEec------------CCC
Q 048169          173 PPKLSPLSDKTTIFAS---------------------------SYLESMKKLGFLTVNKINVLIQ------------NPK  213 (275)
Q Consensus       173 YPyFay~~np~~i~lD---------------------------~~~~amkk~G~~~~n~in~~~~------------~~~  213 (275)
                      ||||+|.+||++|++|                           .++.||+|+|+.+   +.|+|.            +.+
T Consensus       178 YPyf~~~~~~~~i~l~yAlf~~~~~~~~~~~~~Y~nlfDa~~Da~~~Al~~~g~~~---~~v~V~EtGWPs~G~~~as~~  254 (316)
T 3em5_A          178 YPYFTYAGNPRDISLPYALFTSPSVVVWDGQRGYKNLFDATLDALYSALERASGGS---LEVVVSESGWPSAGAFAATFD  254 (316)
T ss_dssp             CHHHHHHHCTTTSCHHHHTTCCSSCSEEETTEEECSHHHHHHHHHHHHHHHTTCTT---CCEEEEEECCCSSSSTTCCHH
T ss_pred             chhhhccCCCCCcCchhhcccCCCcccCCCCccHHHHHHHHHHHHHHHHHHcCCCC---CceEeccccCCCCCCCCCCHH
Confidence            9999999999888755                           3468999999977   888886            233


Q ss_pred             CCcccccchhhhhhccccCCCCCCCCC
Q 048169          214 GTKPTSRKLSAEVIDTKIINPYPARPT  240 (275)
Q Consensus       214 ~~~~~~r~l~~~~~~~~~~~~~p~~p~  240 (275)
                      .++.|+|.|++.+     -.+.|.||-
T Consensus       255 na~~y~~~li~~~-----~~GTP~rp~  276 (316)
T 3em5_A          255 NGRTYLSNLIQHV-----KRGTPKRPK  276 (316)
T ss_dssp             HHHHHHHHHHHHT-----TSCCSSSCS
T ss_pred             HHHHHHHHHHHhc-----cCCCCCCCC
Confidence            4677889998554     247899884



>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 275
d2cyga1312 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana ( 1e-18
d1aq0a_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 3e-15
d1ghsa_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 2e-14
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Length = 312 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]
 Score = 81.6 bits (201), Expect = 1e-18
 Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 8/159 (5%)

Query: 31  VYDSTPELLPAASHSGLPLAVPVSEKNLDEISSSVIMAESWLRTYVLPHYPATKITTIVV 90
           +YD     L A  +S + + + V   ++  ++S+   A  W+R  V+ ++P+     I V
Sbjct: 32  LYDPNQAALQALRNSNIQVLLDVPRSDVQSLASNPSAAGDWIRRNVVAYWPSVSFRYIAV 91

Query: 91  GNNLFCQKQQDHNLGLILPSLKNMYHSLKRWGLENEIKVSPAFS----SSCFIPDLTLFR 146
           GN L         +   LP+++N+Y++L   GL+N+IKVS A       + + P    F 
Sbjct: 92  GNELIPGSDLAQYI---LPAMRNIYNALSSAGLQNQIKVSTAVDTGVLGTSYPPSAGAFS 148

Query: 147 DDLIKQVIKPLLQFLHTANSTYSIIPPPKLSPLSDKTTI 185
               +  + P++QFL +  +   +   P  S   +   I
Sbjct: 149 SA-AQAYLSPIVQFLASNGAPLLVNVYPYFSYTGNPGQI 186


>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query275
d2cyga1312 Plant beta-glucanases {Banana (Musa acuminata), 1, 100.0
d1aq0a_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d1ghsa_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 95.34
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 89.9
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 85.03
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 80.25
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]
Probab=100.00  E-value=8e-45  Score=334.73  Aligned_cols=210  Identities=23%  Similarity=0.400  Sum_probs=185.7

Q ss_pred             ccccccCCCeEEeecCChhhhhhccCCCccEEeecCccchHhhhcChHHHHHHHHhhccCCCCCccEEEEeecccccccC
Q 048169           19 TGAGQESIELLYVYDSTPELLPAASHSGLPLAVPVSEKNLDEISSSVIMAESWLRTYVLPHYPATKITTIVVGNNLFCQK   98 (275)
Q Consensus        19 ~~~ks~~I~~VRLyDad~~vL~AlagTgI~V~VgVpN~~L~~lAss~~aA~~WV~~NV~py~P~t~I~~IaVGNEVl~~~   98 (275)
                      .++|++||++|||||+|+++|+|+++|||+|+|||+|+++.+++++++.|++||+++|++|++.++|++|+||||++...
T Consensus        20 ~lLk~~~i~~IRlY~~d~~vL~A~~~tgi~v~lGv~n~~l~~~~~~~~~a~~wv~~~v~~~~~~~~I~~IaVGNE~l~~~   99 (312)
T d2cyga1          20 SLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQSLASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGS   99 (312)
T ss_dssp             HHHHHTTCCEEEESSCCHHHHHHHTTSCCEEEEEECHHHHHHHHHCTTHHHHHHHHHTGGGTTTSEEEEEEEEESCTTTS
T ss_pred             HHHHhCCCCEEEEeCCCHHHHHHHHhcCCEEEEeeccchhhhccCCHHHHHHHHHHHHhccCCCceEEEEEecCEEeeCC
Confidence            35789999999999999999999999999999999999999999999999999999999999999999999999999653


Q ss_pred             CCcccchhhHHHHHHHHHHHHhcCCCCceEEecCccCCC----CCCCccccchhhhhhhHHHHHHHHhhcCCceEecCCC
Q 048169           99 QQDHNLGLILPSLKNMYHSLKRWGLENEIKVSPAFSSSC----FIPDLTLFRDDLIKQVIKPLLQFLHTANSTYSIIPPP  174 (275)
Q Consensus        99 ~~~~~~~~LvPAM~NI~~AL~~~GL~~~IKVST~~s~~v----yPPSaG~F~~d~~~~vm~piL~FL~~tgSPfmVNvYP  174 (275)
                        +. ...+||+|+|+|+||+++|+.+.||++|++++++    +|||+|.|+++.. ++|+++++||..|++|||+|+||
T Consensus       100 --~~-~~~~lpa~~~~~~aL~~~g~~~~i~~t~~~~~~~~~~s~p~sa~~~~~~~~-~~l~~~~~fl~~~~~~~~~n~yp  175 (312)
T d2cyga1         100 --DL-AQYILPAMRNIYNALSSAGLQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQ-AYLSPIVQFLASNGAPLLVNVYP  175 (312)
T ss_dssp             --TT-GGGHHHHHHHHHHHHHHTTCTTTSEEEEEEEGGGBSCCSSGGGCCBCHHHH-HHHHHHHHHHHHHTCCEEEECCH
T ss_pred             --cC-chhhcccHHHHHHHHHHCCCCCCceeeeeeeeeccccCCCCccccccchhH-HHHHHHHHHHHhcCCeeeEeccc
Confidence              34 6789999999999999999999999999999988    9999999999987 89999999999999999999999


Q ss_pred             CCccCCCCCccccch---------------------------HHHHHHHhCCCCCCeeEEEec-----C--------CCC
Q 048169          175 KLSPLSDKTTIFASS---------------------------YLESMKKLGFLTVNKINVLIQ-----N--------PKG  214 (275)
Q Consensus       175 yFay~~np~~i~lD~---------------------------~~~amkk~G~~~~n~in~~~~-----~--------~~~  214 (275)
                      ||+|..||..+++|+                           ++++|+|.|+.+   +.|+|.     +        ++.
T Consensus       176 y~~~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~~d~~~d~~~~a~~~~g~~~---~~ivI~EtGWPs~G~~~~as~~n  252 (312)
T d2cyga1         176 YFSYTGNPGQISLPYALFTASGVVVQDGRFSYQNLFDAIVDAVFAALERVGGAN---VAVVVSESGWPSAGGGAEASTSN  252 (312)
T ss_dssp             HHHHHHSTTTSCHHHHHTCCCSCSEEETTEEECSHHHHHHHHHHHHHHTTTCTT---CCEEEEEECCCSSSSSTTSSHHH
T ss_pred             hhhhccCcccccchhhhccCCCccccccHHHHHHHHHHHHHHHHHHHHHhCCCC---CceEEecCCcccCCCCCCCCHHH
Confidence            999999998876543                           347899999877   777777     1        222


Q ss_pred             CcccccchhhhhhccccCCCCCCCCC
Q 048169          215 TKPTSRKLSAEVIDTKIINPYPARPT  240 (275)
Q Consensus       215 ~~~~~r~l~~~~~~~~~~~~~p~~p~  240 (275)
                      ++.|+|.|++..-.     ..|.||-
T Consensus       253 a~~y~~~l~~~~~~-----gtp~~~~  273 (312)
T d2cyga1         253 AQTYNQNLIRHVGG-----GTPRRPG  273 (312)
T ss_dssp             HHHHHHHHHHHGGG-----CCSSSCS
T ss_pred             HHHHHHHHHHHHhc-----CCCCCCC
Confidence            56777888855422     6666663



>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure