Citrus Sinensis ID: 048390

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
Protein Sequence
MASRSSVSLSLSFFLDLLCYLELCSCFYPKHLNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEcccccccccccccccccccccccccccEEEEccHHccccccccccEEEEccccccccccEEEEEEEcccccccccccccccccHHHHHHHccccHHHHHHcccEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEccccccccccccccccccccccccccHHHHHHHHHHccccccccEEEEEcccccccccEEEEEEcccccccccccccccccHHHHHHHHHccccHHHHHHccEEEEEEcc
Coil and Loop (DISEMBL)
masrssvsLSLSFFLDLLCYLElcscfypkhlnlsavgthwstagatwygspdgagndggscgygnevsqspfasfvtaigpslyksgkecggcyqctkhpacsgkAVRVVITDfcgggpfapesahfdlsgtafgamaipsqEAKLRNAGVLEVQYAR
Flexible Loop (DISEMBL)
masrssvsLSLSFFLDLLCYLELCSCFYPKHLNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR
Low Complexity Region (SEG)
MAsrssvslslsffldllcylelcscFYPKHLNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR
Disordered region (IsUnstruct)
********LSLSFFLDLLCYLELCSCFYPKHLNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAI*******************
Disordered Region (DISOPRED)
***********SFFLDLLCYLELCSCFYPKHLNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR
Disordered Region (DISEMBL)
*********SLSFFLDLLCYLELCSCFYPKHLNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR
Disordered Region (DISPRO)
*ASRSSVSLSLSFFLDLLCYLELCSCFYPKHLNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASRSSVSLSLSFFLDLLCYLELCSCFYPKHLNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	159	2.2.26 [Sep-21-2011]
Q9SHY6	273	Putative expansin-B2 OS=A	yes	no	0.855	0.498	0.580	4e-39
Q6H677	273	Putative expansin-B14 OS=	yes	no	0.949	0.553	0.493	1e-36
Q7XT40	264	Expansin-B15 OS=Oryza sat	no	no	0.974	0.587	0.521	4e-36
Q5W6Z9	264	Expansin-B18 OS=Oryza sat	no	no	0.761	0.458	0.593	4e-35
Q7XT39	275	Expansin-B5 OS=Oryza sati	no	no	0.767	0.443	0.588	2e-34
Q9SHD1	259	Expansin-B4 OS=Arabidopsi	no	no	0.842	0.517	0.510	6e-32
Q10G40	313	Expansin-B12 OS=Oryza sat	no	no	0.981	0.498	0.461	7e-31
Q9M203	264	Expansin-B5 OS=Arabidopsi	no	no	0.748	0.450	0.516	4e-29
Q6H676	292	Expansin-B11 OS=Oryza sat	no	no	0.773	0.421	0.568	4e-28
Q336T5	268	Expansin-B3 OS=Oryza sati	no	no	0.723	0.429	0.504	6e-27

>sp|Q9SHY6|EXPB2_ARATH Putative expansin-B2 OS=Arabidopsis thaliana GN=EXPB2 PE=3 SV=2

 Score =  160 bits (404), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 83/143 (58%), Positives = 98/143 (68%), Gaps = 7/143 (4%)

Query: 22  ELCSCFYPKHLNLSAVGT---HWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVT 78
            L  CF PK  N+SA  T    WS AG+TWYG+P G G+DGG+CGYGN V+Q PF+  V+
Sbjct: 25  NLTHCFSPKKFNISAATTSDSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVS 84

Query: 79  AIGPSLYKSGKECGGCYQ--CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFG 136
           A GPSL+KSGK CG CYQ  CT   ACS   V VVITD C G     ES HFDLSGTAFG
Sbjct: 85  AGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVVITDECPG--CVKESVHFDLSGTAFG 142

Query: 137 AMAIPSQEAKLRNAGVLEVQYAR 159
           AMAI  Q+++LRN G L++ Y +
Sbjct: 143 AMAISGQDSQLRNVGELQILYKK 165

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.
Arabidopsis thaliana (taxid: 3702)

>sp|Q6H677|EXB14_ORYSJ Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1

 Score =  151 bits (382), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 79/160 (49%), Positives = 103/160 (64%), Gaps = 9/160 (5%)

Query: 7   VSLSLSFFLDLLCYLELCSCFYPKHLNLSAVGTH-----WSTAGATWYGSPDGAGNDGGS 61
           ++L+      ++ ++ L  C      ++++V  H     WS  GATWYG  +G+G DGG+
Sbjct: 1   MALAAKLLPSIVAFVALACCVL--RSSVASVDHHRKLSGWSIGGATWYGPANGSGTDGGA 58

Query: 62  CGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ--CTKHPACSGKAVRVVITDFCGGG 119
           CGY  +V Q PF S + A  PS+Y+SGK CG CYQ  C+ +P+CSGK V VV+TD C GG
Sbjct: 59  CGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPSCSGKPVTVVLTDLCPGG 118

Query: 120 PFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR 159
               E  HFDLSGTAFGAMA P Q+ +LRNAG L VQYAR
Sbjct: 119 ACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYAR 158

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XT40|EXB15_ORYSJ Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2

 Score =  150 bits (379), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 84/161 (52%), Positives = 101/161 (62%), Gaps = 6/161 (3%)

Query: 1   MASRSSVSLSLSFFLDLLCYLELCSCFYPKHLNLSAVGTHWSTAGATWYGSPDGAGNDGG 60
           MASR  + LS    +  +  L         H  LS+    WS  GATWYG+ +GAG+DGG
Sbjct: 1   MASRFQLILSTFVVIAAVTMLPRPCASIEFHRKLSS----WSNGGATWYGAANGAGSDGG 56

Query: 61  SCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ--CTKHPACSGKAVRVVITDFCGG 118
           +CGY   V Q+PF+S + A  PS+YKSG  CG CYQ  CT + ACSG  V VV+TD C G
Sbjct: 57  ACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSACSGNPVTVVLTDECPG 116

Query: 119 GPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR 159
           GP   E  HFDLSGTAFGAMA P Q  +LR AGVL++QY R
Sbjct: 117 GPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNR 157

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q5W6Z9|EXB18_ORYSJ Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1

 Score =  146 bits (369), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 73/123 (59%), Positives = 88/123 (71%), Gaps = 2/123 (1%)

Query: 39  THWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ-- 96
           + WS  GATWYG+ +GAG+DGG+CGY   V Q+PF+S + A  PS+YKSG  CG CYQ  
Sbjct: 35  SSWSNGGATWYGAANGAGSDGGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVK 94

Query: 97  CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQ 156
           C+ + ACSG  V VV+TD C GGP   E  HFDLSGTAFGAMA P Q  +LR AGVL++Q
Sbjct: 95  CSGNSACSGNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQ 154

Query: 157 YAR 159
           Y R
Sbjct: 155 YNR 157

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XT39|EXPB5_ORYSJ Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2

 Score =  144 bits (364), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 90/124 (72%), Gaps = 2/124 (1%)

Query: 38  GTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ- 96
           G  WS+ GATWYG P G G++GG+CGY + V Q PF+S + A GPSL+K+GK CG CYQ 
Sbjct: 42  GYGWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQI 101

Query: 97  -CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEV 155
            CT + ACSG+ V VVITD C GG    E+AHFD+SGTAFGAMA      +LR+AGVL++
Sbjct: 102 KCTGNRACSGRPVTVVITDSCPGGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKI 161

Query: 156 QYAR 159
           QY R
Sbjct: 162 QYKR 165

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SHD1|EXPB4_ARATH Expansin-B4 OS=Arabidopsis thaliana GN=EXPB4 PE=2 SV=1

 Score =  136 bits (342), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 72/141 (51%), Positives = 90/141 (63%), Gaps = 7/141 (4%)

Query: 21  LELCSCFYPKHLNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAI 80
           L+ C C   ++  +   G+   TAG TWYG P GAG+ GG+CGYG+ V+  P  + V+A 
Sbjct: 18  LKFCYC---QNETIDVAGS--GTAGVTWYGEPFGAGSTGGACGYGSAVANPPLYAMVSAG 72

Query: 81  GPSLYKSGKECGGCYQ--CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAM 138
           GPSL+ +GK CG CYQ  C  HPACSG  + V ITD C GGP A E  H DLSG A GA+
Sbjct: 73  GPSLFNNGKGCGTCYQVVCIGHPACSGSPITVTITDECPGGPCASEPVHIDLSGKAMGAL 132

Query: 139 AIPSQEAKLRNAGVLEVQYAR 159
           A P Q  +LR+AGV+ V Y R
Sbjct: 133 AKPGQADQLRSAGVIRVNYKR 153

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

>sp|Q10G40|EXB12_ORYSJ Expansin-B12 OS=Oryza sativa subsp. japonica GN=EXPB12 PE=2 SV=2

 Score =  132 bits (333), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 79/171 (46%), Positives = 100/171 (58%), Gaps = 15/171 (8%)

Query: 1   MASRSSVSLSLSFFLDLLCYLELCSCFYP-KHLNLSAVGTHWSTAGATWYGSPDGAGNDG 59
           MA+     L L +F+ +     L S F P   + L    + WS   ATWYG P+GAG++G
Sbjct: 1   MAAFEPHRLQLLYFIAITV---LASVFQPCTSIELHRELSGWSNGIATWYGDPNGAGSEG 57

Query: 60  GSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ--CTKHPACSGKAVRVVITDFCG 117
           G+CGY   V Q PF+S + A  P +Y SGK CG CY+  C  + ACSG  V VVITD   
Sbjct: 58  GACGYQYAVDQPPFSSRIAAGSPYIYDSGKGCGSCYRVVCAGNEACSGIPVTVVITDQGP 117

Query: 118 GGPFAP---------ESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR 159
           GGP            E+AHFD+SGTAFGAMA P Q  +LR AG+L++QY R
Sbjct: 118 GGPCLEELVDGQCMNEAAHFDMSGTAFGAMARPGQADQLRGAGLLQIQYTR 168

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9M203|EXPB5_ARATH Expansin-B5 OS=Arabidopsis thaliana GN=EXPB5 PE=2 SV=2

 Score =  127 bits (318), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 3/122 (2%)

Query: 39  THWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQCT 98
           THW+TAG TWYG  +G G  GG+CGYG+ V++ P+   V+A GPSL+K GK CG CY+  
Sbjct: 32  THWNTAGITWYGDREGPGTTGGACGYGDAVAKHPYRCMVSAGGPSLFKDGKGCGACYRLK 91

Query: 99  -KHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQY 157
             HP C+ K ++V+I+D C G     ES HFDLSG AFGA+A   +  +LRN G L+V Y
Sbjct: 92  CDHPLCTKKPIKVMISDECPG--CTKESVHFDLSGKAFGALAKRGKGDQLRNLGELKVSY 149

Query: 158 AR 159
            R
Sbjct: 150 KR 151

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6H676|EXB11_ORYSJ Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1

 Score =  123 bits (309), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/125 (56%), Positives = 87/125 (69%), Gaps = 2/125 (1%)

Query: 37  VGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ 96
           V T W+ AGAT+YG+P+G G+DGG+CGY   V Q PF+S + A  PSLYK GK CG CY+
Sbjct: 60  VTTGWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYE 119

Query: 97  --CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLE 154
             CT + ACSG+   VVITD C GG     +AHFD+SGT+ GAMA P    KLR AG+L+
Sbjct: 120 VKCTTNAACSGQPATVVITDECPGGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQ 179

Query: 155 VQYAR 159
           VQY R
Sbjct: 180 VQYRR 184

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q336T5|EXPB3_ORYSJ Expansin-B3 OS=Oryza sativa subsp. japonica GN=EXPB3 PE=2 SV=2

 Score =  119 bits (299), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 63/125 (50%), Positives = 82/125 (65%), Gaps = 10/125 (8%)

Query: 40  HWSTAGATWYGSPDGAG--NDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ- 96
           +W  A ATWYG+P GAG  +DGG+CG+ N  +Q PF+S  +     ++K GK CG CYQ 
Sbjct: 41  NWEVARATWYGAPTGAGPDDDGGACGFKN-TNQYPFSSMTSCGNEPIFKDGKGCGSCYQI 99

Query: 97  -CTKHPACSGKAVRVVITDFCGGGPFAPESA-HFDLSGTAFGAMAIPSQEAKLRNAGVLE 154
            C  HPACSG    V+ITD      + P S  HFDLSGTAFGAMA P Q  +LR+AG+++
Sbjct: 100 RCVNHPACSGNPETVIITDMN----YYPVSKYHFDLSGTAFGAMAKPGQNDQLRHAGIID 155

Query: 155 VQYAR 159
           +Q+ R
Sbjct: 156 IQFKR 160

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
225443047	279	PREDICTED: putative expansin-B2 [Vitis v	0.899	0.512	0.741	1e-56
83778375	279	beta expansin 2 precursor [Solanum tuber	0.924	0.526	0.695	4e-53
350537039	285	beta expansin precursor [Solanum lycoper	0.924	0.515	0.688	1e-52
350538529	275	beta-expansin precursor [Solanum lycoper	0.955	0.552	0.596	4e-45
83778373	276	beta expansin 1 precursor [Solanum tuber	0.918	0.528	0.638	4e-45
224129938	274	hypothetical protein POPTRDRAFT_572072 [	0.918	0.532	0.592	5e-42
255541170	272	Beta-expansin 3 precursor, putative [Ric	0.937	0.547	0.590	1e-40
449431962	273	PREDICTED: putative expansin-B2-like [Cu	0.924	0.538	0.561	2e-37
79372123	273	putative expansin-B2 [Arabidopsis thalia	0.855	0.498	0.580	2e-37
6686395	491	F1E22.6 [Arabidopsis thaliana]	0.855	0.276	0.580	7e-37

>gi|225443047|ref|XP_002269190.1| PREDICTED: putative expansin-B2 [Vitis vinifera] gi|297743578|emb|CBI36445.3| unnamed protein product [Vitis vinifera]

 Score =  224 bits (570), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 109/147 (74%), Positives = 121/147 (82%), Gaps = 4/147 (2%)

Query: 17  LLCYLELCSCFYPKHLNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASF 76
            LC  E C  F PK+ NLS  GTHW++AGATWYGSP+GAG+DGGSCGYGN VSQ PF+S 
Sbjct: 23  FLCCFETCHSFKPKYFNLSRAGTHWASAGATWYGSPEGAGSDGGSCGYGNAVSQPPFSSM 82

Query: 77  VTAIGPSLYKSGKECGGCYQ--CTK--HPACSGKAVRVVITDFCGGGPFAPESAHFDLSG 132
           +T IGPSLYKSGKECG CYQ  CTK  HP+CSG+ VRVVITDFC GGP A +SAHFDLSG
Sbjct: 83  ITGIGPSLYKSGKECGACYQVKCTKRMHPSCSGRPVRVVITDFCPGGPCASQSAHFDLSG 142

Query: 133 TAFGAMAIPSQEAKLRNAGVLEVQYAR 159
           TAFGAMAIP QE KLRN GVLE++YAR
Sbjct: 143 TAFGAMAIPGQEEKLRNVGVLEIRYAR 169

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|83778375|gb|ABC47128.1| beta expansin 2 precursor [Solanum tuberosum]

 Score =  212 bits (540), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 105/151 (69%), Positives = 121/151 (80%), Gaps = 4/151 (2%)

Query: 13  FFLDLLCYLELCSCFYPKHLNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSP 72
             + L+C++     + PKH NLS   THW TAGATWYGSP GAG+DGGSCGYG+ VSQ+P
Sbjct: 15  LIIVLVCFICPSFGYKPKHFNLSTHATHWGTAGATWYGSPHGAGSDGGSCGYGSAVSQAP 74

Query: 73  FASFVTAIGPSLYKSGKECGGCYQ--CTK--HPACSGKAVRVVITDFCGGGPFAPESAHF 128
           F+SFVT IGPSLYKSGKECG CYQ  CTK  H +CSGK VRVVITDFC GGP   +SAHF
Sbjct: 75  FSSFVTGIGPSLYKSGKECGACYQVKCTKKMHGSCSGKGVRVVITDFCPGGPCVAQSAHF 134

Query: 129 DLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR 159
           DLSGTAFG+MAIP QE KLR+AGVL+++YAR
Sbjct: 135 DLSGTAFGSMAIPGQEQKLRDAGVLQIRYAR 165

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350537039|ref|NP_001233766.1| beta expansin precursor [Solanum lycopersicum] gi|81367673|gb|ABB71677.1| beta expansin precursor [Solanum lycopersicum]

 Score =  210 bits (535), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 104/151 (68%), Positives = 120/151 (79%), Gaps = 4/151 (2%)

Query: 13  FFLDLLCYLELCSCFYPKHLNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSP 72
             + L+C++     + PKH NLS   THW TAGATWYGSP GAG+DGGSCGYG+ VS++P
Sbjct: 15  LIIVLVCFICPSFGYKPKHFNLSTHATHWGTAGATWYGSPHGAGSDGGSCGYGSAVSEAP 74

Query: 73  FASFVTAIGPSLYKSGKECGGCYQ--CTK--HPACSGKAVRVVITDFCGGGPFAPESAHF 128
            +SFVT IGPSLYKSGKECG CYQ  CTK  H +CSGK VRVVITDFC GGP   +SAHF
Sbjct: 75  LSSFVTGIGPSLYKSGKECGACYQVKCTKKMHRSCSGKGVRVVITDFCPGGPCVAQSAHF 134

Query: 129 DLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR 159
           DLSGTAFGAMAIP QE KLR+AGVL+++YAR
Sbjct: 135 DLSGTAFGAMAIPGQEQKLRDAGVLQIRYAR 165

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350538529|ref|NP_001234859.1| beta-expansin precursor [Solanum lycopersicum] gi|82569705|gb|ABB83474.1| beta-expansin precursor [Solanum lycopersicum]

 Score =  186 bits (471), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 93/156 (59%), Positives = 111/156 (71%), Gaps = 4/156 (2%)

Query: 8   SLSLSFFLDLLCYLELCSCFYPKHLNLSAVGTH--WSTAGATWYGSPDGAGNDGGSCGYG 65
           S+  ++F         CSC +PK  N+S V ++  WS  GATWYGSP GAG+DGG+CGY 
Sbjct: 11  SIVFTYFTTFSLLTITCSCLHPKRFNVSKVQSNSDWSPPGATWYGSPSGAGSDGGACGYT 70

Query: 66  NEVSQSPFASFVTAIGPSLYKSGKECGGCYQ--CTKHPACSGKAVRVVITDFCGGGPFAP 123
           N V Q PF+S + A GPSL+KSGK CG CYQ  CT + ACSGK VRVVITD C GGP   
Sbjct: 71  NAVDQPPFSSLIAAAGPSLFKSGKGCGACYQVKCTGNKACSGKPVRVVITDSCPGGPCLS 130

Query: 124 ESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR 159
           ESAHFDLSGT+FGAMAI  Q  +LRNAGV+++QY R
Sbjct: 131 ESAHFDLSGTSFGAMAISGQADQLRNAGVIQIQYKR 166

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|83778373|gb|ABC47127.1| beta expansin 1 precursor [Solanum tuberosum]

 Score =  185 bits (470), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 97/152 (63%), Positives = 113/152 (74%), Gaps = 6/152 (3%)

Query: 14  FLDLLCYLEL-CSCFYPKHLN-LSAVGTH--WSTAGATWYGSPDGAGNDGGSCGYGNEVS 69
           +  L   L + CSCF+PK LN +S + ++  WS AGATWYGSP GAG+DGG+CGY N V 
Sbjct: 16  YFTLFSILTISCSCFHPKRLNNVSKIQSNSDWSPAGATWYGSPSGAGSDGGACGYTNAVD 75

Query: 70  QSPFASFVTAIGPSLYKSGKECGGCYQ--CTKHPACSGKAVRVVITDFCGGGPFAPESAH 127
           Q PF+S + A GPSL+KSGK CG CYQ  CT + ACSGK VRVVITD C GGP   ESAH
Sbjct: 76  QPPFSSLIAAAGPSLFKSGKGCGACYQVKCTGNKACSGKPVRVVITDSCPGGPCLSESAH 135

Query: 128 FDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR 159
           FDLSGT+FGAMAI  Q  +LRNAGVL+VQY R
Sbjct: 136 FDLSGTSFGAMAISGQADQLRNAGVLQVQYKR 167

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129938|ref|XP_002320708.1| hypothetical protein POPTRDRAFT_572072 [Populus trichocarpa] gi|222861481|gb|EEE99023.1| hypothetical protein POPTRDRAFT_572072 [Populus trichocarpa]

 Score =  175 bits (444), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 93/157 (59%), Positives = 115/157 (73%), Gaps = 11/157 (7%)

Query: 9   LSLSFFLDLLCYLELCSCFYPKHLNLSAVGTH--WSTAGATWYGSPDGAGNDGGSCGYGN 66
           + L+FFL     +  C CF+PK  N+S + ++  WS AGATWYGSP GAG+DGG+CGYGN
Sbjct: 14  IILAFFL-----VNSCHCFHPKLFNVSKIQSNSDWSPAGATWYGSPTGAGSDGGACGYGN 68

Query: 67  EVSQSPFASFVTAIGPSLYKSGKECGGCYQ--CT--KHPACSGKAVRVVITDFCGGGPFA 122
            V Q+PF+SF++A G S+YKSG+ CG CYQ  CT   + ACSG  V VVITD C G P A
Sbjct: 69  AVEQAPFSSFISAGGDSIYKSGQGCGACYQVKCTSSSNAACSGNPVTVVITDQCPGSPCA 128

Query: 123 PESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR 159
            ES HFDLSGTAFGAMAI  +E +LRNAGVL++Q+ R
Sbjct: 129 QESFHFDLSGTAFGAMAISGKEDQLRNAGVLQIQHQR 165

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541170|ref|XP_002511649.1| Beta-expansin 3 precursor, putative [Ricinus communis] gi|223548829|gb|EEF50318.1| Beta-expansin 3 precursor, putative [Ricinus communis]

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/154 (59%), Positives = 103/154 (66%), Gaps = 5/154 (3%)

Query: 11  LSFFLDLLCYLELCSCFYPKHLNLSAV---GTHWSTAGATWYGSPDGAGNDGGSCGYGNE 67
           L   L L+     C CF  K  N+S      + W+ AGATWYGSP GAG+DGG+CGY N 
Sbjct: 10  LVSVLALVFLFNSCYCFKHKSFNVSRTQSGDSGWAPAGATWYGSPTGAGSDGGACGYQNA 69

Query: 68  VSQSPFASFVTAIGPSLYKSGKECGGCYQ--CTKHPACSGKAVRVVITDFCGGGPFAPES 125
           V Q PF+S + A GPSLYKSGK CG CYQ  CT H ACSGK   VVITD C GGP   ES
Sbjct: 70  VDQPPFSSMIAAGGPSLYKSGKGCGACYQVKCTSHSACSGKPATVVITDECPGGPCTAES 129

Query: 126 AHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR 159
            HFDLSGTAFGAMAI     +LRNAGVL+++Y R
Sbjct: 130 VHFDLSGTAFGAMAISGGADQLRNAGVLQIRYRR 163

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449431962|ref|XP_004133769.1| PREDICTED: putative expansin-B2-like [Cucumis sativus] gi|449526511|ref|XP_004170257.1| PREDICTED: putative expansin-B2-like [Cucumis sativus]

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/155 (56%), Positives = 103/155 (66%), Gaps = 8/155 (5%)

Query: 13  FFLDLLCYLELCS---CFYPKHLNLS---AVGTHWSTAGATWYGSPDGAGNDGGSCGYGN 66
           FF  L+  L L     CF+PK  N+S   +  + WS A ATWYG PDGAG+DGGSCGYG 
Sbjct: 6   FFAALIISLSLAPPSFCFHPKSFNVSKYQSDDSDWSPAVATWYGPPDGAGSDGGSCGYGK 65

Query: 67  EVSQSPFASFVTAIGPSLYKSGKECGGCYQ--CTKHPACSGKAVRVVITDFCGGGPFAPE 124
            V Q PF+SF+ A GPSLYK G+ CG CYQ  C+   ACSG  V VVITD C GG  A +
Sbjct: 66  AVEQPPFSSFIAAGGPSLYKYGQACGACYQVKCSGEGACSGNPVTVVITDSCPGGSCASD 125

Query: 125 SAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR 159
           S HFDLSGTAFGAMA   +  +LR+ GVL +Q+ R
Sbjct: 126 SVHFDLSGTAFGAMAATGRAEELRSLGVLHIQHKR 160

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79372123|ref|NP_564860.3| putative expansin-B2 [Arabidopsis thaliana] gi|20138423|sp|Q9SHY6.2|EXPB2_ARATH RecName: Full=Putative expansin-B2; Short=At-EXPB2; Short=AtEXPB2; AltName: Full=Ath-ExpBeta-1.4; AltName: Full=Beta-expansin-2; Flags: Precursor gi|332196289|gb|AEE34410.1| putative expansin-B2 [Arabidopsis thaliana]

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/143 (58%), Positives = 98/143 (68%), Gaps = 7/143 (4%)

Query: 22  ELCSCFYPKHLNLSAVGT---HWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVT 78
            L  CF PK  N+SA  T    WS AG+TWYG+P G G+DGG+CGYGN V+Q PF+  V+
Sbjct: 25  NLTHCFSPKKFNISAATTSDSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVS 84

Query: 79  AIGPSLYKSGKECGGCYQ--CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFG 136
           A GPSL+KSGK CG CYQ  CT   ACS   V VVITD C G     ES HFDLSGTAFG
Sbjct: 85  AGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVVITDECPG--CVKESVHFDLSGTAFG 142

Query: 137 AMAIPSQEAKLRNAGVLEVQYAR 159
           AMAI  Q+++LRN G L++ Y +
Sbjct: 143 AMAISGQDSQLRNVGELQILYKK 165

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6686395|gb|AAF23829.1|AC007234_1 F1E22.6 [Arabidopsis thaliana]

 Score =  158 bits (399), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 83/143 (58%), Positives = 98/143 (68%), Gaps = 7/143 (4%)

Query: 22  ELCSCFYPKHLNLSAVGT---HWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVT 78
            L  CF PK  N+SA  T    WS AG+TWYG+P G G+DGG+CGYGN V+Q PF+  V+
Sbjct: 25  NLTHCFSPKKFNISAATTSDSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVS 84

Query: 79  AIGPSLYKSGKECGGCYQ--CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFG 136
           A GPSL+KSGK CG CYQ  CT   ACS   V VVITD C G     ES HFDLSGTAFG
Sbjct: 85  AGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVVITDECPG--CVKESVHFDLSGTAFG 142

Query: 137 AMAIPSQEAKLRNAGVLEVQYAR 159
           AMAI  Q+++LRN G L++ Y +
Sbjct: 143 AMAISGQDSQLRNVGELQILYKK 165

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
TAIR|locus:2018521	273	EXPB2 "expansin B2" [Arabidops	0.823	0.479	0.586	2.6e-38
TAIR|locus:2055594	259	EXPB4 "expansin B4" [Arabidops	0.817	0.501	0.522	1.5e-33
TAIR|locus:2051338	271	EXPB1 "expansin B1" [Arabidops	0.811	0.476	0.462	1.9e-28
TAIR|locus:2123643	264	EXPB3 "expansin B3" [Arabidops	0.786	0.473	0.472	6.4e-28
TAIR|locus:4515102723	223	EXPB6 "AT1G65681" [Arabidopsis	0.654	0.466	0.527	4.6e-25
TAIR|locus:2133427	255	EXPA17 "expansin A17" [Arabido	0.754	0.470	0.356	7.7e-16
TAIR|locus:2087027	255	EXPA5 "expansin A5" [Arabidops	0.698	0.435	0.362	3.3e-15
TAIR|locus:2099991	260	EXPA16 "expansin A16" [Arabido	0.716	0.438	0.367	6.9e-15
TAIR|locus:2130444	250	EXLB1 "expansin-like B1" [Arab	0.767	0.488	0.384	8.8e-15
TAIR|locus:2161028	255	EXPA14 "expansin A14" [Arabido	0.698	0.435	0.374	1.1e-14

TAIR|locus:2018521 EXPB2 "expansin B2" [Arabidopsis thaliana (taxid:3702)]

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 81/138 (58%), Positives = 96/138 (69%)

Query:    27 FYPKHLNLSAVGTH---WSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPS 83
             F PK  N+SA  T    WS AG+TWYG+P G G+DGG+CGYGN V+Q PF+  V+A GPS
Sbjct:    30 FSPKKFNISAATTSDSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPS 89

Query:    84 LYKSGKECGGCYQ--CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIP 141
             L+KSGK CG CYQ  CT   ACS   V VVITD C G     ES HFDLSGTAFGAMAI 
Sbjct:    90 LFKSGKGCGACYQVKCTSKSACSKNPVTVVITDECPG--CVKESVHFDLSGTAFGAMAIS 147

Query:   142 SQEAKLRNAGVLEVQYAR 159
              Q+++LRN G L++ Y +
Sbjct:   148 GQDSQLRNVGELQILYKK 165

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2055594 EXPB4 "expansin B4" [Arabidopsis thaliana (taxid:3702)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 70/134 (52%), Positives = 87/134 (64%)

Query:    28 YPKHLNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKS 87
             Y ++  +   G+   TAG TWYG P GAG+ GG+CGYG+ V+  P  + V+A GPSL+ +
Sbjct:    22 YCQNETIDVAGS--GTAGVTWYGEPFGAGSTGGACGYGSAVANPPLYAMVSAGGPSLFNN 79

Query:    88 GKECGGCYQ--CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEA 145
             GK CG CYQ  C  HPACSG  + V ITD C GGP A E  H DLSG A GA+A P Q  
Sbjct:    80 GKGCGTCYQVVCIGHPACSGSPITVTITDECPGGPCASEPVHIDLSGKAMGALAKPGQAD 139

Query:   146 KLRNAGVLEVQYAR 159
             +LR+AGV+ V Y R
Sbjct:   140 QLRSAGVIRVNYKR 153

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2051338 EXPB1 "expansin B1" [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 61/132 (46%), Positives = 77/132 (58%)

Query:    31 HLNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKE 90
             H N     T W  A ATWYGS +G G+ GG+CGYG+ V   PF + V A+ P L+K G+ 
Sbjct:    30 HSNQQVAATRWLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEG 89

Query:    91 CGGCYQ--CTKHPACSGKAVRVVITDFCGGGPFAP-ESAHFDLSGTAFGAMAIPSQEAKL 147
             CG CY+  C     CS +AV ++ TD    GP A  +  HFDLSG AFG MAIP     +
Sbjct:    90 CGACYKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVI 149

Query:   148 RNAGVLEVQYAR 159
             RN G+L + Y R
Sbjct:   150 RNRGLLNILYRR 161

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2123643 EXPB3 "expansin B3" [Arabidopsis thaliana (taxid:3702)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 61/129 (47%), Positives = 78/129 (60%)

Query:    33 NLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECG 92
             N     +HW  A ATWYGSP+G G+DGG+CGYG  V   P  + V A+ P L+K+G+ CG
Sbjct:    28 NRHVSNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCG 87

Query:    93 GCYQ--CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNA 150
              CY+  C     CS +AV V+ITD C G   +  S HFDLSG  FG +AI  +   LRN 
Sbjct:    88 ACYKVRCLDKSICSRRAVTVIITDECPG--CSKTSTHFDLSGAVFGRLAIAGESGPLRNR 145

Query:   151 GVLEVQYAR 159
             G++ V Y R
Sbjct:   146 GLIPVIYRR 154

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0019953 "sexual reproduction" evidence=IEA

GO:0006949 "syncytium formation" evidence=IEP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:4515102723 EXPB6 "AT1G65681" [Arabidopsis thaliana (taxid:3702)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 57/108 (52%), Positives = 71/108 (65%)

Query:    54 GAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ--CTKHPACSGKAVRVV 111
             GAG+ GG+CG+   V+  P    V+A GPS++ +G  CG C+Q  C  HPACS + + V 
Sbjct:    11 GAGSTGGACGFA--VANPPLYGMVSAGGPSVFNNGIGCGTCFQILCNGHPACSRRPITVT 68

Query:   112 ITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR 159
             ITD C GGP A E AHFDLSG A GA+A P Q  +LR+AGVL V Y R
Sbjct:    69 ITDECPGGPCASEPAHFDLSGKAMGALARPGQGDRLRSAGVLRVYYRR 116

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=IEA

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2133427 EXPA17 "expansin A17" [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 51/143 (35%), Positives = 75/143 (52%)

Query:    32 LNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKEC 91
             + +S+V   W  A AT+YG  D +G  GG+CGYGN  +   + +   A+  +L+  GK C
Sbjct:    19 MKISSVSAGWLQAHATFYGGSDASGTMGGACGYGNLYTDG-YKTNTAALSTALFNDGKSC 77

Query:    92 GGCYQ--C--TKHPA-C-SGKAVRVVITDFC---------GGGPFAPESAHFDLSGTAFG 136
             GGCYQ  C  TK P  C  GK++ +  T+FC          GG   P   HFD++  AF 
Sbjct:    78 GGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAF- 136

Query:   137 AMAIPSQEAKLRNAGVLEVQYAR 159
              + I    AK + AG++ + Y +
Sbjct:   137 -LTI----AKYK-AGIVPILYKK 153

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

TAIR|locus:2087027 EXPA5 "expansin A5" [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 45/124 (36%), Positives = 64/124 (51%)

Query:    41 WSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ--CT 98
             W  A AT+YG  D +G  GG+CGYGN  SQ  +     A+  +L+  G  CG C++  C 
Sbjct:    38 WINAHATFYGGGDASGTMGGACGYGNLYSQG-YGLETAALSTALFDQGLSCGACFELMCV 96

Query:    99 KHPA-C-SGKAVRVVITDFCG-GGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEV 155
               P  C  G+++ V  T+FC  GG   P + HFDLS   +  +A       L  +G++ V
Sbjct:    97 NDPQWCIKGRSIVVTATNFCPPGGACDPPNHHFDLSQPIYEKIA-------LYKSGIIPV 149

Query:   156 QYAR 159
              Y R
Sbjct:   150 MYRR 153

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

TAIR|locus:2099991 EXPA16 "expansin A16" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 50/136 (36%), Positives = 69/136 (50%)

Query:    38 GTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ- 96
             G  W TA AT+YG  D +G  GG+CGYGN  SQ  + +   A+  SL+ SG+ CG C++ 
Sbjct:    31 GGSWQTAHATFYGGNDASGTMGGACGYGNLYSQG-YGTNTAALSTSLFNSGQSCGACFEI 89

Query:    97 -CTKHPA-C--SGKAVRVVITDFC---------GGGPFAPESAHFDLSGTAFGAMAIPSQ 143
              C   P  C     +V V  T+FC          GG   P  +HFDL      AM +  +
Sbjct:    90 KCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDL------AMPVFLK 143

Query:   144 EAKLRNAGVLEVQYAR 159
              A+ R AG++ + Y R
Sbjct:   144 IAEYR-AGIVPISYRR 158

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP

TAIR|locus:2130444 EXLB1 "expansin-like B1" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 50/130 (38%), Positives = 66/130 (50%)

Query:    32 LNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKEC 91
             L L  +   +  + AT+YGSPD   N  G CGYG E  +      V+ +   L+ +G  C
Sbjct:    18 LPLLCLSDDFVNSRATYYGSPDCKANPRGHCGYG-EFGRDINNGEVSGVSWRLWNNGTGC 76

Query:    92 GGCYQ--CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRN 149
             G CYQ  C   P CS + V VV TD  G G    +   F LS  A+G MA P  E +L +
Sbjct:    77 GACYQVRCKIPPHCSEEGVYVVATD-SGEG----DGTDFILSPKAYGRMARPGTENQLYS 131

Query:   150 AGVLEVQYAR 159
              GV+ V+Y R
Sbjct:   132 FGVVNVEYQR 141

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=ISS

GO:0009828 "plant-type cell wall loosening" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2161028 EXPA14 "expansin A14" [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 49/131 (37%), Positives = 65/131 (49%)

Query:    41 WSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ--CT 98
             W  A AT+YG  D +G  GG+CGYGN  SQ  + +   A+  +L+  G+ CG C+Q  C 
Sbjct:    29 WVNARATFYGGADASGTMGGACGYGNLYSQG-YGTNTAALSTALFNGGQSCGACFQIKCV 87

Query:    99 KHPA-CSGKAVRVVITDFC---------GGGPFAPESAHFDLSGTAFGAMAIPSQEAKLR 148
               P  C G  + V  T+FC          GG   P   HFDL+   F  +A    + K  
Sbjct:    88 DDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIA----QYK-- 141

Query:   149 NAGVLEVQYAR 159
              AGV+ VQY R
Sbjct:   142 -AGVVPVQYRR 151

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00033241001 SubName- Full=Chromosome chr9 scaffold_65, whole genome shotgun sequence; (279 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	159
PLN03023	247	PLN03023, PLN03023, Expansin-like B1; Provisional	1e-19
pfam03330	77	pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like	3e-17
PLN00050	247	PLN00050, PLN00050, expansin A; Provisional	3e-15
PLN00193	256	PLN00193, PLN00193, expansin-A; Provisional	1e-10
smart00837	87	smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like	3e-06

>gnl|CDD|215542 PLN03023, PLN03023, Expansin-like B1; Provisional

 Score = 81.8 bits (202), Expect = 1e-19
 Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 9/116 (7%)

Query: 46  ATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ--CTKHPAC 103
           AT+YGSPD  G   G+CG+G E  ++     V  +   LY++G  CG CYQ  C     C
Sbjct: 30  ATYYGSPDCLGTPTGACGFG-EYGRTVNGGNVAGVS-RLYRNGTGCGACYQVRCKAPNLC 87

Query: 104 SGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR 159
           S   V VV+TD+  G     +   F LS  A+  +A P+  A+L   GV++V+Y R
Sbjct: 88  SDDGVNVVVTDYGEG-----DKTDFILSPRAYARLARPNMAAELFAYGVVDVEYRR 138

Length = 247

>gnl|CDD|217497 pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score = 71.1 bits (175), Expect = 3e-17
 Identities = 35/88 (39%), Positives = 41/88 (46%), Gaps = 18/88 (20%)

Query: 77  VTAIGPSLYKSGKECGGCYQCT------KHPACS-GKAVRVVITDFCGGGPFAPESAHFD 129
             A   SLY  G  CG CYQ            C   ++V V ITD C   PF P   HFD
Sbjct: 1   TAAGSASLYNDGTACGECYQVKCLTAAHPTGTCRVLRSVTVTITDRC---PF-PPRRHFD 56

Query: 130 LSGTAFGAMAIPSQEAKLRNAGVLEVQY 157
           LSG AF A+A P        AG++ V+Y
Sbjct: 57  LSGPAFEALAKP-------RAGIVPVEY 77

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 77

>gnl|CDD|165628 PLN00050, PLN00050, expansin A; Provisional

 Score = 70.1 bits (171), Expect = 3e-15
 Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)

Query: 38  GTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ- 96
           G+ W+ A AT+YG  D +G  GG+CGYGN  SQ  + +   A+  +L+ +G  CG C++ 
Sbjct: 22  GSGWTGAHATFYGGGDASGTMGGACGYGNLYSQG-YGTNTAALSTALFNNGLSCGACFEI 80

Query: 97  --CTKHPACSGKAVRVVITDFC---------GGGPFAPESAHFDLSGTAFGAMAIPSQEA 145
                +  C   ++ +  T+FC          GG   P   HFDLS   F       Q+ 
Sbjct: 81  KCVNDNIWCLPGSIIITATNFCPPNLALPNNDGGWCNPPQQHFDLSQPVF-------QKI 133

Query: 146 KLRNAGVLEVQYAR 159
               AG++ VQY R
Sbjct: 134 AQYKAGIVPVQYRR 147

Length = 247

>gnl|CDD|215097 PLN00193, PLN00193, expansin-A; Provisional

 Score = 57.6 bits (139), Expect = 1e-10
 Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 26/152 (17%)

Query: 5   SSVSLSLSFFLDLLCYLEL-CSCFYPKHLNLSAVGTHWSTAGATWYGSPDGAGNDGGSCG 63
           S   L L+  L   CYL +  + F P         + W+ A AT+YG  D +G  GG+CG
Sbjct: 2   SKSLLGLAILLQFCCYLFINVNAFTP---------SGWTKAHATFYGGSDASGTMGGACG 52

Query: 64  YGNEVSQSPFASFVTAIGPSLYKSGKECGGCY------QCTKHPACSGKAVRVVITDFC- 116
           YGN  S + + +   A+  +L+  G  CG CY      Q        G +V +  T+FC 
Sbjct: 53  YGNLYS-TGYGTRTAALSTALFNDGASCGQCYRIMCDYQADSRWCIKGASVTITATNFCP 111

Query: 117 --------GGGPFAPESAHFDLSGTAFGAMAI 140
                    GG   P   HFD++  A+  + I
Sbjct: 112 PNYALPNNNGGWCNPPLQHFDMAQPAWEKIGI 143

Length = 256

>gnl|CDD|129070 smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score = 42.8 bits (101), Expect = 3e-06
 Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 20/93 (21%)

Query: 78  TAIGPSLYKSGKECGGCYQ--CTKHP-AC-SGKAVRVVITDFC---------GGGPFAPE 124
            A+  +L+ +G  CG CY+  C   P  C  G ++ V  T+FC          GG   P 
Sbjct: 2   AALSTALFNNGASCGACYEIMCVDSPKWCKPGGSITVTATNFCPPNYALSNDNGGWCNPP 61

Query: 125 SAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQY 157
             HFDLS  AF  +A          AG++ V+Y
Sbjct: 62  RKHFDLSQPAFEKIAQYK-------AGIVPVKY 87

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 87

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	159
PLN03023	247	Expansin-like B1; Provisional	100.0
PLN00193	256	expansin-A; Provisional	100.0
PLN00050	247	expansin A; Provisional	100.0
PLN03024	125	Putative EG45-like domain containing protein 1; Pr	99.96
smart00837	87	DPBB_1 Rare lipoprotein A (RlpA)-like double-psi b	99.91
PF03330	78	DPBB_1: Rare lipoprotein A (RlpA)-like double-psi	99.81
COG4305	232	Endoglucanase C-terminal domain/subunit and relate	99.1
PF00967	119	Barwin: Barwin family; InterPro: IPR001153 Barwin	98.7
TIGR00413	208	rlpA rare lipoprotein A. This is a family of proka	98.59
COG0797	233	RlpA Lipoproteins [Cell envelope biogenesis, outer	98.47
PRK10672	361	rare lipoprotein A; Provisional	98.21
PF07249	119	Cerato-platanin: Cerato-platanin; InterPro: IPR010	98.12
PF02015	201	Glyco_hydro_45: Glycosyl hydrolase family 45; Inte	83.17

>PLN03023 Expansin-like B1; Provisional

Probab=100.00  E-value=1.1e-37  Score=258.77  Aligned_cols=134  Identities=35%  Similarity=0.640  Sum_probs=117.7

Q ss_pred             chHHHHHHHHHHHhhccccCCCCCCccccCCCeeEEEEEEeCCCCCCCCCcCCCCCCCCCCCCCCCCeEEEeCccccCCC
Q 048390            9 LSLSFFLDLLCYLELCSCFYPKHLNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSG   88 (159)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~w~~g~aT~Y~~~~~~g~~~GACGyg~~~~~~~~~~~iaAls~~l~~~G   88 (159)
                      ||..+||++++++++..+          ..++|.+++||||+++++.|+++|||||++ +..+.++.++||++ .||++|
T Consensus         3 ~~~~~~~~~~~~~~~~~~----------~~~~W~~a~AT~Yg~~~g~gt~gGACGYg~-~~~~~~g~~~aa~s-~Lf~~G   70 (247)
T PLN03023          3 LSHYCCFLCVIVLLPLLC----------KSQDFTYSRATYYGSPDCLGTPTGACGFGE-YGRTVNGGNVAGVS-RLYRNG   70 (247)
T ss_pred             chhhHHHHHHHHHhhhhh----------hcCCcccceEEEeCCCCCCCCCCccccCCc-cccCCCcceeeeeh-hhhcCC
Confidence            455566666665555532          233599999999999999999999999999 77788899999998 999999


Q ss_pred             CCCCccEE--ecCCCCCCCCcEEEEEeccCCCCCCCCCCCceecCHHHHHHhccCchhhhcccCceeEEEEEC
Q 048390           89 KECGGCYQ--CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR  159 (159)
Q Consensus        89 ~~CG~C~e--c~~~~~C~g~sV~V~VtD~Cp~~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i~I~~rr  159 (159)
                      .+||+|||  |+++..|.+++|+|+|||.||+  +   +.|||||.+||.+||+|+++++|++.|+|+|+|||
T Consensus        71 ~~CGaCy~irC~~~~~C~~~~v~V~iTd~~~~--~---~~hFdLS~~AF~~iA~pg~~~~l~~aGiv~v~YrR  138 (247)
T PLN03023         71 TGCGACYQVRCKAPNLCSDDGVNVVVTDYGEG--D---KTDFILSPRAYARLARPNMAAELFAYGVVDVEYRR  138 (247)
T ss_pred             chhcccEEeecCCCCccCCCCeEEEEEeCCCC--C---CCccccCHHHHHHHhCccccchhccCcEEEeEEEE
Confidence            99999999  8888889999999999999985  3   58999999999999999999999999999999998

>PLN00193 expansin-A; Provisional

Probab=100.00  E-value=2.5e-36  Score=251.71  Aligned_cols=134  Identities=33%  Similarity=0.769  Sum_probs=111.9

Q ss_pred             hHHHHHHHHHHHhhccccCCCCCCccccCCCeeEEEEEEeCCCCCCCCCcCCCCCCCCCCCCCCCCeEEEeCccccCCCC
Q 048390           10 SLSFFLDLLCYLELCSCFYPKHLNLSAVGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGK   89 (159)
Q Consensus        10 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~w~~g~aT~Y~~~~~~g~~~GACGyg~~~~~~~~~~~iaAls~~l~~~G~   89 (159)
                      -+-+||.++|.+.-.-...        ...+|.+++||||+.+|+.++++|||||++ +..++++.++||+|+.||++|.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~--------~~~~W~~a~AT~Yg~~d~~gt~gGACGYg~-l~~~~~g~~~AAls~~lf~~G~   77 (256)
T PLN00193          7 GLAILLQFCCYLFINVNAF--------TPSGWTKAHATFYGGSDASGTMGGACGYGN-LYSTGYGTRTAALSTALFNDGA   77 (256)
T ss_pred             HHHHHHHHHHHHHhhccCc--------CCCCceeeEEEEcCCCCCCCCCCcccCCCC-ccccCCCceeeecCHhHccCCc
Confidence            4555666665544221111        234799999999999999999999999999 6678899999999999999999


Q ss_pred             CCCccEE--ec---CCCCCC-CCcEEEEEeccCCC---------CCCCCCCCceecCHHHHHHhccCchhhhcccCceeE
Q 048390           90 ECGGCYQ--CT---KHPACS-GKAVRVVITDFCGG---------GPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLE  154 (159)
Q Consensus        90 ~CG~C~e--c~---~~~~C~-g~sV~V~VtD~Cp~---------~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i~  154 (159)
                      .||+|||  |.   +++.|. +++|+|+|||+||+         +||++++.|||||++||.+||.       ++.|+|+
T Consensus        78 ~CGaCyev~C~~~~~~~~C~~g~sV~Vt~td~CP~n~~~~~~~ggwC~~~~~HFDLS~~AF~~iA~-------~~~Giv~  150 (256)
T PLN00193         78 SCGQCYRIMCDYQADSRWCIKGASVTITATNFCPPNYALPNNNGGWCNPPLQHFDMAQPAWEKIGI-------YRGGIVP  150 (256)
T ss_pred             cccCeEEEECCCCCCCccccCCCeEEEEEecCCCCcccccccCCCcCCCCCcccccCHHHHHHHhh-------hcCCeEe
Confidence            9999999  63   455685 56999999999995         3899889999999999999998       7999999


Q ss_pred             EEEEC
Q 048390          155 VQYAR  159 (159)
Q Consensus       155 I~~rr  159 (159)
                      |+|||
T Consensus       151 V~yrR  155 (256)
T PLN00193        151 VLFQR  155 (256)
T ss_pred             EEEEE
Confidence            99998

>PLN00050 expansin A; Provisional

Probab=100.00  E-value=2.3e-35  Score=244.83  Aligned_cols=115  Identities=37%  Similarity=0.792  Sum_probs=105.2

Q ss_pred             cCCCeeEEEEEEeCCCCCCCCCcCCCCCCCCCCCCCCCCeEEEeCccccCCCCCCCccEE--ecCC-CCCCCCcEEEEEe
Q 048390           37 VGTHWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ--CTKH-PACSGKAVRVVIT  113 (159)
Q Consensus        37 ~~~~w~~g~aT~Y~~~~~~g~~~GACGyg~~~~~~~~~~~iaAls~~l~~~G~~CG~C~e--c~~~-~~C~g~sV~V~Vt  113 (159)
                      +..+|.+++||||+.+++.++++|||||++ +..++++.++||+|+.||++|..||+|||  |.+. ..|.+++|+|+||
T Consensus        21 ~~~~W~~a~AT~Yg~~dg~gt~gGACGYg~-l~~~~~g~~~AAls~~lf~~G~~CGaCyeV~C~~~~~~C~~gsV~V~it   99 (247)
T PLN00050         21 YGSGWTGAHATFYGGGDASGTMGGACGYGN-LYSQGYGTNTAALSTALFNNGLSCGACFEIKCVNDNIWCLPGSIIITAT   99 (247)
T ss_pred             cCCCccccEEEEcCCCCCCCCCCcccCCCC-ccccCCCceeeeccHhHccCCccccceEEEEcCCCCcccCCCcEEEEEe
Confidence            356899999999999999999999999999 66678999999999999999999999999  7543 3588889999999


Q ss_pred             ccCCC---------CCCCCCCCceecCHHHHHHhccCchhhhcccCceeEEEEEC
Q 048390          114 DFCGG---------GPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR  159 (159)
Q Consensus       114 D~Cp~---------~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i~I~~rr  159 (159)
                      |+||+         +||.+++.|||||++||.+||.       ++.|+|+|+|||
T Consensus       100 d~CP~~~~~~~~~~gwC~~~~~hFDLS~~AF~~iA~-------~~aGii~V~yRR  147 (247)
T PLN00050        100 NFCPPNLALPNNDGGWCNPPQQHFDLSQPVFQKIAQ-------YKAGIVPVQYRR  147 (247)
T ss_pred             cCCCCCcCcCccCCCcCCCCCcccccCHHHHHHHhh-------hcCCeeeeEEEE
Confidence            99995         4899889999999999999998       899999999998

>PLN03024 Putative EG45-like domain containing protein 1; Provisional

Probab=99.96  E-value=1.3e-29  Score=191.74  Aligned_cols=97  Identities=33%  Similarity=0.640  Sum_probs=83.6

Q ss_pred             eEEEEEEeCCCCCCCCCcCCCCCCCCCCCCCCCCeEEEeCccccCCCCCCCccEE--ecCC-----CCCCCCcEEEEEec
Q 048390           42 STAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ--CTKH-----PACSGKAVRVVITD  114 (159)
Q Consensus        42 ~~g~aT~Y~~~~~~g~~~GACGyg~~~~~~~~~~~iaAls~~l~~~G~~CG~C~e--c~~~-----~~C~g~sV~V~VtD  114 (159)
                      .+|+||||+++     ..|||+ ++    .+++.++||+|+.+|++|+.||+|||  |.++     ..|++++|+|+|+|
T Consensus        22 ~~G~AT~Y~~~-----~~gAC~-~~----~~~g~~iaAls~~lf~~G~~CG~c~~V~C~~~~~~~~~~c~gksV~V~VtD   91 (125)
T PLN03024         22 TPGIATFYTSY-----TPSACY-RG----TSFGVMIAAASDSLWNNGRVCGKMFTVKCKGPRNAVPHPCTGKSVTVKIVD   91 (125)
T ss_pred             cceEEEEeCCC-----CCcccc-CC----CCCCCEeEEeCHHHcCCCcccCceEEEEECCCCccccccccCCeEEEEEEc
Confidence            56999999874     368994 44    26789999999999999999999999  6664     35899999999999


Q ss_pred             cCCCCCCCCCCCceecCHHHHHHhccCchhhhcccCceeEEEEEC
Q 048390          115 FCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR  159 (159)
Q Consensus       115 ~Cp~~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i~I~~rr  159 (159)
                      +||++ |.   +|||||++||++||+       .+.|+|+|+|.+
T Consensus        92 ~CP~~-C~---~~~DLS~~AF~~iA~-------~~aG~v~V~y~~  125 (125)
T PLN03024         92 HCPSG-CA---STLDLSREAFAQIAN-------PVAGIINIDYIP  125 (125)
T ss_pred             CCCCC-CC---CceEcCHHHHHHhcC-------ccCCEEEEEEeC
Confidence            99942 64   599999999999999       799999999975

>smart00837 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel

Probab=99.91  E-value=8.3e-25  Score=156.11  Aligned_cols=74  Identities=36%  Similarity=0.776  Sum_probs=66.6

Q ss_pred             EEEeCccccCCCCCCCccEE--ec-CCCCCCC-CcEEEEEeccCCC---------CCCCCCCCceecCHHHHHHhccCch
Q 048390           77 VTAIGPSLYKSGKECGGCYQ--CT-KHPACSG-KAVRVVITDFCGG---------GPFAPESAHFDLSGTAFGAMAIPSQ  143 (159)
Q Consensus        77 iaAls~~l~~~G~~CG~C~e--c~-~~~~C~g-~sV~V~VtD~Cp~---------~~C~~~~~~~DLS~~AF~kia~~~~  143 (159)
                      +||+|+.||++|+.||+|||  |. ++..|.+ ++|+|+|||+||+         +||.+++.|||||++||.+||+   
T Consensus         1 taA~s~~lf~~G~~CG~Cy~v~C~~~~~~C~~~~~V~V~vtd~CP~~~~~~~~~~~~C~~~~~hfDLS~~AF~~iA~---   77 (87)
T smart00837        1 TAALSTALFNNGASCGACYEIMCVDSPKWCKPGGSITVTATNFCPPNYALSNDNGGWCNPPRKHFDLSQPAFEKIAQ---   77 (87)
T ss_pred             CcccCHHHccCCccccceEEEEeCCCCCcccCCCeEEEEEeccCCccccccccCCCccCCCCcCeEcCHHHHHHHhh---
Confidence            58999999999999999999  64 4556864 6999999999996         3898888999999999999999   


Q ss_pred             hhhcccCceeEEEE
Q 048390          144 EAKLRNAGVLEVQY  157 (159)
Q Consensus       144 ~~~l~~~G~i~I~~  157 (159)
                          ++.|+|+|+|
T Consensus        78 ----~~~Gvi~v~y   87 (87)
T smart00837       78 ----YKAGIVPVKY   87 (87)
T ss_pred             ----hcCCEEeeEC
Confidence                8999999998

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.

>PF03330 DPBB_1: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; InterPro: IPR009009 Beta barrels are commonly observed in protein structures

Probab=99.81  E-value=2.5e-20  Score=129.12  Aligned_cols=70  Identities=40%  Similarity=0.765  Sum_probs=58.4

Q ss_pred             EEEeCccccCCCCCCCccEE--ec--CCCC--CCC--CcEEEEEeccCCCCCCCCCCCceecCHHHHHHhccCchhhhcc
Q 048390           77 VTAIGPSLYKSGKECGGCYQ--CT--KHPA--CSG--KAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLR  148 (159)
Q Consensus        77 iaAls~~l~~~G~~CG~C~e--c~--~~~~--C~g--~sV~V~VtD~Cp~~~C~~~~~~~DLS~~AF~kia~~~~~~~l~  148 (159)
                      +||++..+|++|..||+||+  |.  ....  |..  ++|+|+|+|+||+  |.  .+|||||+.||++|+.       +
T Consensus         1 t~a~~~~~y~~g~~cG~~~~~~~~~~a~~~~~~~~~~ksV~v~V~D~Cp~--~~--~~~lDLS~~aF~~la~-------~   69 (78)
T PF03330_consen    1 TAAGSATWYDNGTACGQCYQVTCLTAASATGTCKVGNKSVTVTVVDRCPG--CP--PNHLDLSPAAFKALAD-------P   69 (78)
T ss_dssp             EEEE-HHHHGGGTTTT-EEEEEE---SSTT--BESEECEEEEEEEEE-TT--SS--SSEEEEEHHHHHHTBS-------T
T ss_pred             CeEEEhhhcCCCCcCCCeeeccccccCCccceEEecCCeEEEEEEccCCC--Cc--CCEEEeCHHHHHHhCC-------C
Confidence            68999999999999999999  41  1222  665  9999999999998  86  4899999999999999       7


Q ss_pred             cCceeEEEE
Q 048390          149 NAGVLEVQY  157 (159)
Q Consensus       149 ~~G~i~I~~  157 (159)
                      +.|+|+|+|
T Consensus        70 ~~G~i~V~w   78 (78)
T PF03330_consen   70 DAGVIPVEW   78 (78)
T ss_dssp             TCSSEEEEE
T ss_pred             CceEEEEEC
Confidence            999999999

They are classified in terms of two integral parameters: the number of strands in the sheet, n, and the shear number, S, a measure of the stagger of the strands in the beta-sheet. These two parameters have been shown to determine the major geometrical features of beta-barrels. Six-stranded beta-barrels with a pseudo-twofold axis are found in several proteins. One involving parallel strands forming two psi structures is known as the double-psi barrel. The first psi structure consists of the loop connecting strands beta1 and beta2 (a 'psi loop') and the strand beta5, whereas the second psi structure consists of the loop connecting strands beta4 and beta5 and the strand beta2. All the psi structures in double-psi barrels have a unique handedness, in that beta1 (beta4), beta2 (beta5) and the loop following beta5 (beta2) form a right-handed helix. The unique handedness may be related to the fact that the twisting angle between the parallel pair of strands is always larger than that between the antiparallel pair [].; PDB: 1N10_B 3D30_A 2BH0_A 2HCZ_X.

>COG4305 Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism]

Probab=99.10  E-value=7.1e-10  Score=88.68  Aligned_cols=97  Identities=26%  Similarity=0.331  Sum_probs=78.1

Q ss_pred             CCeeEEEEEEeCCCCCCCCCcCCCCCCCCCCCCCCCCeEEEeCccccCCC----CCCCccEEecCCCCCCCCcEEEEEec
Q 048390           39 THWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSG----KECGGCYQCTKHPACSGKAVRVVITD  114 (159)
Q Consensus        39 ~~w~~g~aT~Y~~~~~~g~~~GACGyg~~~~~~~~~~~iaAls~~l~~~G----~~CG~C~ec~~~~~C~g~sV~V~VtD  114 (159)
                      .+-+.|-|||-+..+    .+||=-    +++-+....|.|+++..-+-|    +.-|+-.++.+|    ++..+|-|||
T Consensus        28 d~~f~G~ATyTgsGY----sGGAfl----LDPI~sd~eITAlNPaqlNlGGipAAmAGaYLrVqGP----KG~TTVYVTD   95 (232)
T COG4305          28 DDLFEGYATYTGSGY----SGGAFL----LDPIPSDMEITALNPAQLNLGGIPAAMAGAYLRVQGP----KGKTTVYVTD   95 (232)
T ss_pred             ccccceeEEEecccc----cCceEE----ecCcCCcceeeecCHHHcccCCchhhhccceEEEECC----CCceEEEEec
Confidence            446789999977643    366642    344556788999999877754    457888889988    6788999999


Q ss_pred             cCCCCCCCCCCCceecCHHHHHHhccCchhhhcccCceeEEEEE
Q 048390          115 FCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYA  158 (159)
Q Consensus       115 ~Cp~~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i~I~~r  158 (159)
                      +-|++    .++.||||+.||.+|.+       ++.|+|||+||
T Consensus        96 lYPeg----asGaLDLSpNAFakIGn-------m~qGrIpvqWr  128 (232)
T COG4305          96 LYPEG----ASGALDLSPNAFAKIGN-------MKQGRIPVQWR  128 (232)
T ss_pred             ccccc----cccccccChHHHhhhcc-------hhcCccceeEE
Confidence            99982    25899999999999999       99999999998

>PF00967 Barwin: Barwin family; InterPro: IPR001153 Barwin is a basic protein isolated from aqueous extracts of barley seeds

Probab=98.70  E-value=9.4e-09  Score=76.74  Aligned_cols=60  Identities=32%  Similarity=0.565  Sum_probs=43.5

Q ss_pred             CCCCCCccEEecCCCCCCCCcEEEEEeccCCCCCCCCCCCceecCHHHHHHhccCchhhhcccCceeEEEEE
Q 048390           87 SGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYA  158 (159)
Q Consensus        87 ~G~~CG~C~ec~~~~~C~g~sV~V~VtD~Cp~~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i~I~~r  158 (159)
                      .-..||+|+++++.  -+|.+++|+|+|+|+.       .+|||.+.+|.+|-..+++   ...|.+.|.|+
T Consensus        56 gq~~CGkClrVTNt--~tga~~~~RIVDqCsn-------GGLDld~~vF~~iDtdG~G---~~~Ghl~V~y~  115 (119)
T PF00967_consen   56 GQDSCGKCLRVTNT--ATGAQVTVRIVDQCSN-------GGLDLDPTVFNQIDTDGQG---YAQGHLIVDYE  115 (119)
T ss_dssp             SGGGTT-EEEEE-T--TT--EEEEEEEEE-SS-------SSEES-SSSHHHH-SSSHH---HHHTEEEEEEE
T ss_pred             CcccccceEEEEec--CCCcEEEEEEEEcCCC-------CCcccChhHHhhhccCCcc---cccceEEEEEE
Confidence            34679999999986  3689999999999975       4999999999999865554   67788888875

It is 125 amino acids in length, and contains six cysteine residues that combine to form three disulphide bridges [, ]. Comparative analysis shows the sequence to be highly similar to a 122 amino acid stretch in the C-terminal of the products of two wound-induced genes (win1 and win2) from potato, the product of the hevein gene of rubber trees, and pathogenesis-related protein 4 from tobacco. The high levels of similarity to these proteins, and their ability to bind saccharides, suggest that the barwin domain may be involved in a common defence mechanism in plants.; GO: 0042742 defense response to bacterium, 0050832 defense response to fungus; PDB: 1BW3_A 1BW4_A.

>TIGR00413 rlpA rare lipoprotein A

Probab=98.59  E-value=4e-07  Score=74.29  Aligned_cols=89  Identities=20%  Similarity=0.181  Sum_probs=65.4

Q ss_pred             EEEEEeCCCCCCCCCcCCCCCCCCCCCCCCCCeEEEeCccccCCCCCCCccEEecCCCCCCCCcEEEEEeccCCCCCCCC
Q 048390           44 AGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAP  123 (159)
Q Consensus        44 g~aT~Y~~~~~~g~~~GACGyg~~~~~~~~~~~iaAls~~l~~~G~~CG~C~ec~~~~~C~g~sV~V~VtD~Cp~~~C~~  123 (159)
                      |.|+||+..-.  ...-|.|-..     ....++||..+-.      .|..+++++.  -+|++|+|+|+|++|-   . 
T Consensus         1 G~ASwYg~~f~--G~~TAnGe~y-----~~~~~tAAHktLP------lgT~V~VtNl--~ngrsviVrVnDRGPf---~-   61 (208)
T TIGR00413         1 GLASWYGPKFH--GRKTANGEVY-----NMKALTAAHKTLP------FNTYVKVTNL--HNNRSVIVRINDRGPF---S-   61 (208)
T ss_pred             CEEeEeCCCCC--CCcCCCCeec-----CCCccccccccCC------CCCEEEEEEC--CCCCEEEEEEeCCCCC---C-
Confidence            67999997421  1234444332     2346888876544      4578888875  3689999999999995   3 


Q ss_pred             CCCceecCHHHHHHhccCchhhhcccCceeEEEEE
Q 048390          124 ESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYA  158 (159)
Q Consensus       124 ~~~~~DLS~~AF~kia~~~~~~~l~~~G~i~I~~r  158 (159)
                      +..-+|||+.|+++|..       .+.|+.+|+.+
T Consensus        62 ~gRiIDLS~aAA~~Lg~-------~~~G~a~V~ve   89 (208)
T TIGR00413        62 DDRIIDLSHAAAREIGL-------ISRGVGQVRIE   89 (208)
T ss_pred             CCCEEECCHHHHHHcCC-------CcCceEEEEEE
Confidence            34799999999999999       89999988865

This is a family of prokaryotic proteins with unknown function. Lipoprotein annotation based on the presence of consensus lipoprotein signal sequence. Included in this family is the E. coli putative lipoprotein rlpA.

>COG0797 RlpA Lipoproteins [Cell envelope biogenesis, outer membrane]

Probab=98.47  E-value=8.6e-07  Score=73.46  Aligned_cols=66  Identities=23%  Similarity=0.236  Sum_probs=52.7

Q ss_pred             CCeEEEeCccccCCCCCCCccEEecCCCCCCCCcEEEEEeccCCCCCCCCCCCceecCHHHHHHhccCchhhhcccCcee
Q 048390           74 ASFVTAIGPSLYKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVL  153 (159)
Q Consensus        74 ~~~iaAls~~l~~~G~~CG~C~ec~~~~~C~g~sV~V~VtD~Cp~~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i  153 (159)
                      ..++||.-+-.|.      .-.+++|-  -+|++|+|+|.|++|   +.. ...||||..|+++|+.       .+.|+.
T Consensus       108 ~~~tAAH~TLP~~------t~v~VtNl--~NgrsvvVRINDRGP---f~~-gRiIDlS~aAA~~l~~-------~~~G~a  168 (233)
T COG0797         108 NALTAAHKTLPLP------TYVRVTNL--DNGRSVVVRINDRGP---FVS-GRIIDLSKAAADKLGM-------IRSGVA  168 (233)
T ss_pred             cccccccccCCCC------CEEEEEEc--cCCcEEEEEEeCCCC---CCC-CcEeEcCHHHHHHhCC-------ccCceE
Confidence            4677877766664      45667764  368999999999999   454 4799999999999999       899998


Q ss_pred             EEEEE
Q 048390          154 EVQYA  158 (159)
Q Consensus       154 ~I~~r  158 (159)
                      +|+.+
T Consensus       169 ~V~i~  173 (233)
T COG0797         169 KVRIE  173 (233)
T ss_pred             EEEEE
Confidence            87765

>PRK10672 rare lipoprotein A; Provisional

Probab=98.21  E-value=1.4e-05  Score=70.12  Aligned_cols=89  Identities=17%  Similarity=0.116  Sum_probs=62.8

Q ss_pred             EEEEEEeCCCCCCCCCcCCCCCCCCCCCCCCCCeEEEeCccccCCCCCCCccEEecCCCCCCCCcEEEEEeccCCCCCCC
Q 048390           43 TAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFA  122 (159)
Q Consensus        43 ~g~aT~Y~~~~~~g~~~GACGyg~~~~~~~~~~~iaAls~~l~~~G~~CG~C~ec~~~~~C~g~sV~V~VtD~Cp~~~C~  122 (159)
                      .|.|+||+.....  ..-|-|-..     ....++||...-.|.      ..+++++.  -+|++|+|+|+|++|-   .
T Consensus        80 ~G~ASwYg~~f~G--~~TA~Ge~~-----~~~~~tAAH~tLPlp------s~vrVtNl--~ngrsvvVrVnDRGP~---~  141 (361)
T PRK10672         80 AGLAAIYDAEAGS--NLTASGERF-----DPNALTAAHPTLPIP------SYVRVTNL--ANGRMIVVRINDRGPY---G  141 (361)
T ss_pred             EEEEEEeCCccCC--CcCcCceee-----cCCcCeeeccCCCCC------CEEEEEEC--CCCcEEEEEEeCCCCC---C
Confidence            7899999975211  122333222     234688887665553      66778875  3689999999999995   3


Q ss_pred             CCCCceecCHHHHHHhccCchhhhcccCceeEEEE
Q 048390          123 PESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQY  157 (159)
Q Consensus       123 ~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i~I~~  157 (159)
                       +..-||||..|+++|..       ...+.|.|++
T Consensus       142 -~gRiiDLS~aAA~~Lg~-------~~~~~V~ve~  168 (361)
T PRK10672        142 -PGRVIDLSRAAADRLNT-------SNNTKVRIDP  168 (361)
T ss_pred             -CCCeeEcCHHHHHHhCC-------CCCceEEEEE
Confidence             35799999999999998       5667777765

>PF07249 Cerato-platanin: Cerato-platanin; InterPro: IPR010829 Cerato-platanin (CP) is the first member of the cerato-platanin family

Probab=98.12  E-value=1.3e-05  Score=60.40  Aligned_cols=68  Identities=21%  Similarity=0.495  Sum_probs=48.4

Q ss_pred             CeEEEeCcc-ccCCCCCCCccEEecCCCCCCCCcEEEEEeccCCCCCCCCCCCceecCHHHHHHhccCchhhhcccCcee
Q 048390           75 SFVTAIGPS-LYKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVL  153 (159)
Q Consensus        75 ~~iaAls~~-l~~~G~~CG~C~ec~~~~~C~g~sV~V~VtD~Cp~~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i  153 (159)
                      ..|.+.... -| |...||.|+|.+-    ++++|.|..+|.-+        ..|+|+.+||+.|.+ ++.   .+.|+|
T Consensus        43 p~IGg~~~V~gW-nS~~CGtC~~lty----~g~si~vlaID~a~--------~gfnis~~A~n~LT~-g~a---~~lG~V  105 (119)
T PF07249_consen   43 PYIGGAPAVAGW-NSPNCGTCWKLTY----NGRSIYVLAIDHAG--------GGFNISLDAMNDLTN-GQA---VELGRV  105 (119)
T ss_dssp             TSEEEETT--ST-T-TTTT-EEEEEE----TTEEEEEEEEEE-S--------SSEEE-HHHHHHHHT-S-C---CCC-EE
T ss_pred             CeeccccccccC-CCCCCCCeEEEEE----CCeEEEEEEEecCC--------CcccchHHHHHHhcC-Ccc---cceeEE
Confidence            567777663 46 5589999999874    48999999999954        369999999999997 233   467999


Q ss_pred             EEEEEC
Q 048390          154 EVQYAR  159 (159)
Q Consensus       154 ~I~~rr  159 (159)
                      +++|++
T Consensus       106 ~a~~~q  111 (119)
T PF07249_consen  106 DATYTQ  111 (119)
T ss_dssp             E-EEEE
T ss_pred             EEEEEE
Confidence            999974

It is produced by the Ascomycete Ceratocystis fimbriata f. sp. platani and causes the severe plant disease: canker stain. This protein occurs in the cell wall of the fungus and is involved in the host-plane interaction and induces both cell necrosis and phytoalexin synthesis which is one of the first plant defense-related events. CP, like other fungal surface proteins, is able to self assemble in vitro []. CP is a 120 amino acid protein, containing 40% hydrophobic residues and two S-S bridges. It contains four cysteine residues that form two disulphide bonds []. The N-terminal region of CP is very similar to cerato-ulmin, a phytotoxic protein produced by the Ophiostoma species belonging to the hydrophobin family, which also self-assembles []. This entry also includes other precursor proteins.; PDB: 2KQA_A 3M3G_A.

>PF02015 Glyco_hydro_45: Glycosyl hydrolase family 45; InterPro: IPR000334 O-Glycosyl hydrolases 3

Probab=83.17  E-value=0.84  Score=37.40  Aligned_cols=41  Identities=32%  Similarity=0.446  Sum_probs=26.7

Q ss_pred             CCCCccEEecCC-CCCCCCcEEEEEeccCCCCCCCCCCCceecCHH
Q 048390           89 KECGGCYQCTKH-PACSGKAVRVVITDFCGGGPFAPESAHFDLSGT  133 (159)
Q Consensus        89 ~~CG~C~ec~~~-~~C~g~sV~V~VtD~Cp~~~C~~~~~~~DLS~~  133 (159)
                      ..|++|||.+=. ..-.||..+|+||+.--+    ...+||||..+
T Consensus        82 ~~Cc~Cy~LtFt~g~l~GKkmiVQ~tNtG~d----lg~n~FDl~iP  123 (201)
T PF02015_consen   82 SWCCACYELTFTSGPLKGKKMIVQVTNTGGD----LGSNQFDLAIP  123 (201)
T ss_dssp             HHTT-EEEEEE-SSTTTT-EEEEEEEEE-TT----TTTTEEEEE-T
T ss_pred             CcccceEEEEEcCCCcCCCEeEEEecccCCC----CCCCeEEEEeC
Confidence            569999994321 234689999999998754    23589999765

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 45 GH45 from CAZY comprises enzymes with only one known activity; endoglucanase (3.2.1.4 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases, cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produce a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family K or as the glycosyl hydrolases family 45 []. The best conserved regions in these enzymes is located in the N-terminal section. It contains an aspartic acid residue which has been shown [] to act as a nucleophile in the catalytic mechanism. This also has several cysteines that are involved in forming disulphide bridges.; GO: 0008810 cellulase activity, 0005975 carbohydrate metabolic process; PDB: 1OA7_A 1OA9_A 1L8F_A 1HD5_A 4ENG_A 3ENG_A 2ENG_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	159
1n10_A	241	Crystal Structure Of Phl P 1, A Major Timothy Grass		2e-23
2hcz_X	245	Crystal Structure Of Expb1 (Zea M 1), A Beta-Expans		8e-22

>pdb|1N10|A Chain A, Crystal Structure Of Phl P 1, A Major Timothy Grass Pollen Allergen Length = 241

Iteration: 1
 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/136 (47%), Positives = 83/136 (61%), Gaps = 9/136 (6%)
Query: 29  PKHLNLSAV-GTHWSTAGATWYGSPDGAG--NDGGSCGYGNEVSQSPFASFVTAIGPSLY 85
           P   N++A  G  W  A +TWYG P GAG  ++GG+CGY  +V + PF+         ++
Sbjct: 6   PPGPNITATYGDKWLDAKSTWYGKPTGAGPKDNGGACGY-KDVDKPPFSGMTGCGNTPIF 64
Query: 86  KSGKECGGCYQ--CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQ 143
           KSG+ CG C++  CTK  ACSG+ V V ITD     P AP   HFDLSG AFGAMA    
Sbjct: 65  KSGRGCGSCFEIKCTKPEACSGEPVVVHITDD-NEEPIAP--YHFDLSGHAFGAMAKKGD 121
Query: 144 EAKLRNAGVLEVQYAR 159
           E KLR+AG LE+Q+ R
Sbjct: 122 EQKLRSAGELELQFRR 137

>pdb|2HCZ|X Chain X, Crystal Structure Of Expb1 (Zea M 1), A Beta-Expansin And Group-1 Pollen Allergen From Maize Length = 245

Iteration: 1
 Score = 99.4 bits (246), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 8/124 (6%)
Query: 40  HWSTAGATWYGSPDGAG--NDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ- 96
            W TA ATWYG P+GAG  ++GG+CG  N V+  P++         ++K GK CG CY+ 
Sbjct: 18  KWLTARATWYGQPNGAGAPDNGGACGIKN-VNLPPYSGMTACGNVPIFKDGKGCGSCYEV 76
Query: 97  -CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEV 155
            C + P CSG  V V ITD     P AP   HFDLSG AFG++A P    K+R+ G+++V
Sbjct: 77  RCKEKPECSGNPVTVYITDM-NYEPIAP--YHFDLSGKAFGSLAKPGLNDKIRHCGIMDV 133
Query: 156 QYAR 159
           ++ R
Sbjct: 134 EFRR 137

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	159
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	1e-31
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	1e-31
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	4e-21
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	7e-05

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays} Length = 245

 Score =  112 bits (282), Expect = 1e-31
 Identities = 52/129 (40%), Positives = 71/129 (55%), Gaps = 8/129 (6%)

Query: 35  SAVGTHWSTAGATWYGSPDGAGND--GGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECG 92
           +     W TA ATWYG P+GAG    GG+CG  N V+  P++         ++K GK CG
Sbjct: 13  TNYNGKWLTARATWYGQPNGAGAPDNGGACGIKN-VNLPPYSGMTACGNVPIFKDGKGCG 71

Query: 93  GCYQ--CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNA 150
            CY+  C + P CSG  V V ITD            HFDLSG AFG++A P    K+R+ 
Sbjct: 72  SCYEVRCKEKPECSGNPVTVYITDMN---YEPIAPYHFDLSGKAFGSLAKPGLNDKIRHC 128

Query: 151 GVLEVQYAR 159
           G+++V++ R
Sbjct: 129 GIMDVEFRR 137

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3 Length = 241

 Score =  112 bits (281), Expect = 1e-31
 Identities = 62/136 (45%), Positives = 80/136 (58%), Gaps = 9/136 (6%)

Query: 29  PKHLNLSAV-GTHWSTAGATWYGSPDGAG--NDGGSCGYGNEVSQSPFASFVTAIGPSLY 85
           P   N++A  G  W  A +TWYG P GAG  ++GG+CGY + V + PF+         ++
Sbjct: 6   PPGPNITATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKD-VDKPPFSGMTGCGNTPIF 64

Query: 86  KSGKECGGCYQ--CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQ 143
           KSG+ CG C++  CTK  ACSG+ V V ITD            HFDLSG AFGAMA    
Sbjct: 65  KSGRGCGSCFEIKCTKPEACSGEPVVVHITDDNEEPIAPY---HFDLSGHAFGAMAKKGD 121

Query: 144 EAKLRNAGVLEVQYAR 159
           E KLR+AG LE+Q+ R
Sbjct: 122 EQKLRSAGELELQFRR 137

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A Length = 208

 Score = 84.1 bits (208), Expect = 4e-21
 Identities = 23/123 (18%), Positives = 34/123 (27%), Gaps = 27/123 (21%)

Query: 41  WSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSG----KECGGCYQ 96
                AT+ GS       GG+          P    +TAI P+    G       G   +
Sbjct: 6   LHEGYATYTGSGYS----GGAFLLDP----IPSDMEITAINPADLNYGGVKAALAGSYLE 57

Query: 97  CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQ 156
                        V +TD    G         DLS  AF  +            G + ++
Sbjct: 58  VE----GPKGKTTVYVTDLYPEGA----RGALDLSPNAFRKIGNMK-------DGKINIK 102

Query: 157 YAR 159
           +  
Sbjct: 103 WRV 105

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1 Length = 181

 Score = 39.9 bits (92), Expect = 7e-05
 Identities = 29/154 (18%), Positives = 39/154 (25%), Gaps = 48/154 (31%)

Query: 41  WSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFA----SFVTAIGPSLYKS------GKE 90
            S A  T Y          G+CG G     + F     SFV A     + S      G+ 
Sbjct: 14  KSCASTTNYHDSHK-----GACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQH 68

Query: 91  CGGCYQ--CTKHPACS-------GKAVRVVITDFC----------------GGGPFAPES 125
           CG C +   T             G +   +IT+ C                GG       
Sbjct: 69  CGQCIKLTTTGGYVPGQGGPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYE 128

Query: 126 AHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR 159
            H DL             +         E  +  
Sbjct: 129 LHLDLEN--------GRSQVTGMGWNNPETTWEV 154

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	159
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	100.0
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	100.0
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	99.96
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	99.94
1bw3_A	125	Barwin, basic barley SEED protein; lectin; NMR {Ho	99.64
4avr_A	95	PA4485; unknown function, GRAM-negative bacteria,	99.51
2kqa_A	129	Cerato-platanin; elicitor, secreted, toxin; NMR {C	98.17
3m3g_A	120	EPL1 protein; fungal, plant defense, fungus, polys	98.09
3suj_A	127	Cerato-platanin 1; double PSI beta barrel, unknown	97.94
3sul_A	122	Cerato-platanin-like protein; double PSI beta barr	97.92
3suk_A	125	Cerato-platanin-like protein; double PSI beta barr	97.88
3sum_A	136	Cerato-platanin-like protein; double PSI beta barr	97.78
2eng_A	210	Endoglucanase V; cellulose degradation, hydrolase	90.27

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3

Probab=100.00  E-value=2.6e-37  Score=254.68  Aligned_cols=120  Identities=49%  Similarity=0.925  Sum_probs=105.0

Q ss_pred             ccCCCeeEEEEEEeCCCCCCCC--CcCCCCCCCCCCCCCCCCeEEEeCccccCCCCCCCccEE--ecCCCCCCCCcEEEE
Q 048390           36 AVGTHWSTAGATWYGSPDGAGN--DGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ--CTKHPACSGKAVRVV  111 (159)
Q Consensus        36 ~~~~~w~~g~aT~Y~~~~~~g~--~~GACGyg~~~~~~~~~~~iaAls~~l~~~G~~CG~C~e--c~~~~~C~g~sV~V~  111 (159)
                      .++.+|++|+||||++++++++  ++|||||++ ++..+++.++||+|+.||++|..||+|||  |.+++.|.+++|+|+
T Consensus        14 ~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~-~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~~~C~~~~v~V~   92 (241)
T 1n10_A           14 TYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKD-VDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVH   92 (241)
T ss_dssp             BCCCSCEEEEEEEEC----------CCTTCCCC-TTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSSTTBCSCCEEEE
T ss_pred             cccCCceeeEEEEeCCCCCCCcCCCCeeCCCCC-cCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCCCccCCCCEEEE
Confidence            5678899999999999988887  799999999 77788999999999999999999999999  777667999999999


Q ss_pred             EeccCCCCCCCCCCCceecCHHHHHHhccCchhhhcccCceeEEEEEC
Q 048390          112 ITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR  159 (159)
Q Consensus       112 VtD~Cp~~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i~I~~rr  159 (159)
                      |||+|+   |++++.|||||+.||++||+++++++|++.|+|+|+|||
T Consensus        93 VtD~C~---C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrr  137 (241)
T 1n10_A           93 ITDDNE---EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRR  137 (241)
T ss_dssp             EEEECS---SCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEE
T ss_pred             EeEecC---CCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEE
Confidence            999995   876789999999999999999999999999999999997

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}

Probab=100.00  E-value=5.8e-37  Score=253.14  Aligned_cols=120  Identities=43%  Similarity=0.919  Sum_probs=111.3

Q ss_pred             ccCCCeeEEEEEEeCCCCCCCC--CcCCCCCCCCCCCCCCCCeEEEeCccccCCCCCCCccEE--ecCCCCCCCCcEEEE
Q 048390           36 AVGTHWSTAGATWYGSPDGAGN--DGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ--CTKHPACSGKAVRVV  111 (159)
Q Consensus        36 ~~~~~w~~g~aT~Y~~~~~~g~--~~GACGyg~~~~~~~~~~~iaAls~~l~~~G~~CG~C~e--c~~~~~C~g~sV~V~  111 (159)
                      .++..|++|+||||+++++.++  ++|||||++ ++.++++.++||+|+.||++|..||+|||  |.++..|.+++|+|+
T Consensus        14 ~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~-~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~~~C~~~sv~V~   92 (245)
T 2hcz_X           14 NYNGKWLTARATWYGQPNGAGAPDNGGACGIKN-VNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVY   92 (245)
T ss_dssp             CCCCCCEEEEEEECSCTTSCSSTTSCCTTCCCC-TTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSSSSBCSSCEEEE
T ss_pred             ccCCceeeeEEEEeCCCCCCCcCCCCccCCCCC-CCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCCCccCCCCEEEE
Confidence            5678899999999999988887  789999999 77788999999999999999999999999  776667999999999


Q ss_pred             EeccCCCCCCCCCCCceecCHHHHHHhccCchhhhcccCceeEEEEEC
Q 048390          112 ITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR  159 (159)
Q Consensus       112 VtD~Cp~~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i~I~~rr  159 (159)
                      |||+||   |++++.|||||+.||++||+++++++|++.|+|+|+|||
T Consensus        93 VtD~C~---C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrr  137 (245)
T 2hcz_X           93 ITDMNY---EPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRR  137 (245)
T ss_dssp             EEEECC---CTTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEE
T ss_pred             EEeccC---CCCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEE
Confidence            999997   665689999999999999999999999999999999997

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1

Probab=99.96  E-value=7.3e-30  Score=201.53  Aligned_cols=106  Identities=25%  Similarity=0.350  Sum_probs=90.7

Q ss_pred             CeeEEEEEEeCCCCCCCCCcCCCCCC-----CCCCCCCCCCeEEEeCccccCCC------CCCCccEE--ecCCC-----
Q 048390           40 HWSTAGATWYGSPDGAGNDGGSCGYG-----NEVSQSPFASFVTAIGPSLYKSG------KECGGCYQ--CTKHP-----  101 (159)
Q Consensus        40 ~w~~g~aT~Y~~~~~~g~~~GACGyg-----~~~~~~~~~~~iaAls~~l~~~G------~~CG~C~e--c~~~~-----  101 (159)
                      .|+.++||||++.     ++|||||+     + +++++++.++||||+.||++|      +.||+|||  |++..     
T Consensus        13 g~~~A~aT~Yg~~-----~gGACGyG~~~~~~-l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg   86 (181)
T 1wc2_A           13 GKSCASTTNYHDS-----HKGACGCGPASGDA-QFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG   86 (181)
T ss_dssp             TEEEEEEEEECCC-----BCTTTTCSCSSSSB-CCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred             CccccceeEecCC-----CCcccCcCcCCCCC-ccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCccccc
Confidence            4999999999984     68999999     4 455678999999999999997      89999999  65432     


Q ss_pred             -CC-CCCcEEEEEeccCCC-----CCCCCC-----------CCceecCHHHHHHhccCchhhhcccCceeEEEEEC
Q 048390          102 -AC-SGKAVRVVITDFCGG-----GPFAPE-----------SAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR  159 (159)
Q Consensus       102 -~C-~g~sV~V~VtD~Cp~-----~~C~~~-----------~~~~DLS~~AF~kia~~~~~~~l~~~G~i~I~~rr  159 (159)
                       .| .+++|+|||||+||+     +||.++           +.||||+++| .+|+.       +..|+|+|+|||
T Consensus        87 ~~~~~g~SI~VtaTN~CPpn~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~-------~~~GivpV~yrr  154 (181)
T 1wc2_A           87 GPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTG-------MGWNNPETTWEV  154 (181)
T ss_dssp             CCCCTTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGG-------GTCSSEEEEEEE
T ss_pred             ccCCCCCeEEEEEecCCCCCCCCCCccCCCcccCcccccCccccccccchH-HHhhh-------hcCCCceeEEEE
Confidence             12 367999999999994     599753           7899999999 89998       789999999997

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A

Probab=99.94  E-value=1.4e-27  Score=192.64  Aligned_cols=98  Identities=23%  Similarity=0.274  Sum_probs=86.3

Q ss_pred             CCeeEEEEEEeCCCCCCCCCcCCCCCCCCCCCCCCCCeEEEeCccccCCC----CCCCccEEecCCCCCCCCcEEEEEec
Q 048390           39 THWSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSG----KECGGCYQCTKHPACSGKAVRVVITD  114 (159)
Q Consensus        39 ~~w~~g~aT~Y~~~~~~g~~~GACGyg~~~~~~~~~~~iaAls~~l~~~G----~~CG~C~ec~~~~~C~g~sV~V~VtD  114 (159)
                      .+.++|+||||++..    ++||||+..    .+++.++||+|+.+|++|    ..||+|||++.    .+++|+|+|||
T Consensus         4 ~~~~~G~aT~Y~~g~----~~GACG~~~----~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~----~~gsv~V~v~D   71 (208)
T 3d30_A            4 DDLHEGYATYTGSGY----SGGAFLLDP----IPSDMEITAINPADLNYGGVKAALAGSYLEVEG----PKGKTTVYVTD   71 (208)
T ss_dssp             TCCEEEEEEECSTTS----SSCTTCCCC----CCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEE----TTEEEEEEEEE
T ss_pred             CCcEEEEEEEcCCCC----CCCcCCCCC----CCCCCEEEEeCHHHhCCCCcCccccCCEEEEEe----CCCcEEEEEEE
Confidence            357899999999853    589999875    467899999999999988    89999999764    36799999999


Q ss_pred             cCCCCCCCCCCCceecCHHHHHHhccCchhhhcccCceeEEEEEC
Q 048390          115 FCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR  159 (159)
Q Consensus       115 ~Cp~~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i~I~~rr  159 (159)
                      +||+  |.  ..|||||+.||++||.       ++.|+|+|+|||
T Consensus        72 ~CP~--C~--~~~~DLS~~aF~~la~-------~~~G~i~v~~~~  105 (208)
T 3d30_A           72 LYPE--GA--RGALDLSPNAFRKIGN-------MKDGKINIKWRV  105 (208)
T ss_dssp             ECTT--CC--TTCEEECHHHHHHHSC-------GGGSSEEEEEEE
T ss_pred             CCCC--CC--CCeEECCHHHHHHhcc-------cCCCEEEEEEEE
Confidence            9998  85  5899999999999998       799999999996

>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A

Probab=99.64  E-value=1.6e-17  Score=124.67  Aligned_cols=68  Identities=24%  Similarity=0.403  Sum_probs=55.1

Q ss_pred             eCcccc-CCCCCCCccEEecCCCCCCCCcEEEEEeccCCCCCCCCCCCceecC-HHHHHHhccCchhhhcccCceeEEEE
Q 048390           80 IGPSLY-KSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLS-GTAFGAMAIPSQEAKLRNAGVLEVQY  157 (159)
Q Consensus        80 ls~~l~-~~G~~CG~C~ec~~~~~C~g~sV~V~VtD~Cp~~~C~~~~~~~DLS-~~AF~kia~~~~~~~l~~~G~i~I~~  157 (159)
                      +...+. +++..||+|++++++  .++++|+|+|+|+||.  |     +|||| ++||++|+.++++   ++.|+|+|+|
T Consensus        51 ~~g~~gp~~g~~CG~cv~Vtn~--~nGksV~V~VvD~CP~--g-----gLDLS~~~AF~~Ia~~g~G---~~~G~i~V~w  118 (125)
T 1bw3_A           51 FCGPAGPRGQAACGKCLRVTNP--ATGAQITARIVDQCAN--G-----GLDLDWDTVFTKIDTNGIG---YQQGHLNVNY  118 (125)
T ss_dssp             SCSTTCCCSGGGTTCEEEEEET--TTTEEEEEEEEECCSS--S-----SCCSCSSSSHHHHCSSCHH---HHHSEEEEEE
T ss_pred             eccCCCCCCCcccCCEEEeEeC--CCCCEEEEEEEEeCCC--C-----CCCCCCHHHHHHHhccCCc---ccCcEEEEEE
Confidence            333334 778999999998865  2589999999999997  4     49999 9999999985432   6789999999


Q ss_pred             EC
Q 048390          158 AR  159 (159)
Q Consensus       158 rr  159 (159)
                      ++
T Consensus       119 ~~  120 (125)
T 1bw3_A          119 QF  120 (125)
T ss_dssp             EE
T ss_pred             EE
Confidence            84

>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}

Probab=99.51  E-value=1.3e-13  Score=99.03  Aligned_cols=91  Identities=21%  Similarity=0.168  Sum_probs=73.9

Q ss_pred             eEEEEEEeCCCCCCCCCcCCCCCCCCCCCCCCCCeEEEeCccccCCCCCCCccEEecCCCCCCCCcEEEEEeccCCCCCC
Q 048390           42 STAGATWYGSPDGAGNDGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPF  121 (159)
Q Consensus        42 ~~g~aT~Y~~~~~~g~~~GACGyg~~~~~~~~~~~iaAls~~l~~~G~~CG~C~ec~~~~~C~g~sV~V~VtD~Cp~~~C  121 (159)
                      +.|.|+||++.-.  ....|||-..     ....++||..+-      -||..+++++.  -+|++|+|+|+|+||-  |
T Consensus         2 ~~G~ASwYg~~f~--G~~TA~Ge~~-----~~~~~tAAH~tl------P~gt~vrVtNl--~nGksVvVrVnDRGP~--~   64 (95)
T 4avr_A            2 DTGEASYYGSRHA--GLRTASGERY-----NPNAMTAAHRTL------PFGARVRVTNL--DNRRSVVVRINDRGPF--R   64 (95)
T ss_dssp             EEEEEEECCGGGT--TSBCTTSCBC-----CTTSCEEECSSS------CTTCEEEEEET--TTCCEEEEEEEECCCC--S
T ss_pred             CEEEEEEECCccC--CCCCCCccCc-----CCCCCEEEcCCC------CCCcEEEEEEC--CCCcEEEEEEccCCCC--C
Confidence            5799999997421  1368887655     345799998653      57899999875  3689999999999997  6


Q ss_pred             CCCCCceecCHHHHHHhccCchhhhcccCceeEEEEE
Q 048390          122 APESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYA  158 (159)
Q Consensus       122 ~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i~I~~r  158 (159)
                      .  ...+|||+.||++|+.       ++.|+++|+|+
T Consensus        65 ~--griIDLS~aAa~~Lg~-------~~~G~~~V~ve   92 (95)
T 4avr_A           65 R--GRIIDVSRKAAEGLGM-------IRSGVAPVRIE   92 (95)
T ss_dssp             T--TEEEEECHHHHHHHTC-------TTTSCEEEEEE
T ss_pred             C--CCEEEeCHHHHHHhCC-------cCCCEEEEEEE
Confidence            5  3699999999999998       89999999987

>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}

Probab=98.17  E-value=5e-06  Score=62.32  Aligned_cols=67  Identities=24%  Similarity=0.420  Sum_probs=55.0

Q ss_pred             CeEEEeCccc-cCCCCCCCccEEecCCCCCCCCcEEEEEeccCCCCCCCCCCCceecCHHHHHHhccCchhhhcccCcee
Q 048390           75 SFVTAIGPSL-YKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVL  153 (159)
Q Consensus        75 ~~iaAls~~l-~~~G~~CG~C~ec~~~~~C~g~sV~V~VtD~Cp~~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i  153 (159)
                      .+|.+....- |+ ...||.|+|++-+   ++++|.|+.+|.-+        ..|+++.+||+.|...      .+.|+|
T Consensus        50 P~IGga~~iagWN-S~~CGtC~~lty~---ng~sI~vlaID~A~--------~gFnIs~~Amn~LT~G------~~lG~V  111 (129)
T 2kqa_A           50 PNVGGIPDIAGWD-SPSCGTCWKVTIP---NGNSIFIRGVDSGR--------GGFNVNPTAFTKLVGS------TEAGRV  111 (129)
T ss_dssp             SSEEEETTCCSTT-CTTCSCEEEEEET---TTEEEEEEEEEECS--------SSEEECHHHHHHHHSS------SSSCCB
T ss_pred             CeeccchhhccCC-CCCCCceEEEEEc---CCCEEEEEEEccCC--------CceeehHHHHHHhcCC------cccCcE
Confidence            5677666543 66 7999999998764   48999999999964        3799999999999984      678999


Q ss_pred             -EEEEEC
Q 048390          154 -EVQYAR  159 (159)
Q Consensus       154 -~I~~rr  159 (159)
                       +++|++
T Consensus       112 ~~a~~~q  118 (129)
T 2kqa_A          112 DNVNYVQ  118 (129)
T ss_dssp             CSCEEEE
T ss_pred             eEEEEEE
Confidence             999874

>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}

Probab=98.09  E-value=7.1e-06  Score=60.86  Aligned_cols=68  Identities=16%  Similarity=0.396  Sum_probs=52.8

Q ss_pred             CeEEEeCc-cccCCCCCCCccEEecCCCCCCCCcEEEEEeccCCCCCCCCCCCceecCHHHHHHhccCchhhhcccCcee
Q 048390           75 SFVTAIGP-SLYKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVL  153 (159)
Q Consensus        75 ~~iaAls~-~l~~~G~~CG~C~ec~~~~~C~g~sV~V~VtD~Cp~~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i  153 (159)
                      ..|.+... .-|+ ...||.|+|.+-.    +++|.|..+|.-+        ..|+|+.+||+.|.+ +++   .+.|+|
T Consensus        44 P~IGg~~~i~gwn-s~~CGtC~~lty~----g~si~vlaID~a~--------~Gfnis~~A~n~LT~-G~a---~~lG~V  106 (120)
T 3m3g_A           44 PYIGGAAAVAGWN-SASCGTCWKLQYS----GHTIYVLAVDHAA--------SGFNIALDAMNALTG-GQA---VQLGRV  106 (120)
T ss_dssp             TSEEEETTCCSTT-CTTTTCEEEEEET----TEEEEEEEEEECS--------SSEEECHHHHHHHHT-SCH---HHHCEE
T ss_pred             CccccccccccCC-CCCCCceEEEEEC----CeEEEEEEEecCC--------CceeecHHHHHHhhC-Ccc---eeeeeE
Confidence            56666554 3354 5899999998753    8999999999864        379999999999996 333   356999


Q ss_pred             EEEEEC
Q 048390          154 EVQYAR  159 (159)
Q Consensus       154 ~I~~rr  159 (159)
                      +++|++
T Consensus       107 ~a~~~~  112 (120)
T 3m3g_A          107 SATATQ  112 (120)
T ss_dssp             ECEEEE
T ss_pred             eEEEEE
Confidence            999874

>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=97.94  E-value=1.6e-05  Score=59.55  Aligned_cols=72  Identities=22%  Similarity=0.387  Sum_probs=52.3

Q ss_pred             CeEEEeCc-cccCCCCCCCccEEecCCCC-CCCCcEEEEEeccCCCCCCCCCCCceecCHHHHHHhccCchhhhcccCce
Q 048390           75 SFVTAIGP-SLYKSGKECGGCYQCTKHPA-CSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGV  152 (159)
Q Consensus        75 ~~iaAls~-~l~~~G~~CG~C~ec~~~~~-C~g~sV~V~VtD~Cp~~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~  152 (159)
                      ..|.+... .-|+ ...||.|||.+.+.. -..++|.|..+|.-++        .|+|+.+||+.|.+. ++   .+.|+
T Consensus        44 P~IGg~~~i~gwn-s~~CGtC~~lty~g~~~~~~si~vlaID~a~~--------Gfnis~~Amn~LT~g-~a---~~lG~  110 (127)
T 3suj_A           44 PCIGGSSDIAGYN-SPNCGSCYQLTYSSAHTTPKSIYMVAIDRSAE--------GFTASKQAMDDLTNK-RA---EELGT  110 (127)
T ss_dssp             TSEEEETTCCSTT-CTTTTCEEEEEECCSSSCCEEEEEEEEEECSS--------SEEECHHHHHHHHTS-CH---HHHSS
T ss_pred             CeeccccccccCC-CCCCCceEEEEECCCCCcceEEEEEEEecCCC--------ceeecHHHHHHhcCC-cc---cccee
Confidence            55666543 3354 589999999775410 0128999999999653        699999999999962 32   35689


Q ss_pred             eEEEEEC
Q 048390          153 LEVQYAR  159 (159)
Q Consensus       153 i~I~~rr  159 (159)
                      |+++|++
T Consensus       111 V~~~~~~  117 (127)
T 3suj_A          111 VNVDVRK  117 (127)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEE
Confidence            9999974

>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}

Probab=97.92  E-value=1.9e-05  Score=58.68  Aligned_cols=69  Identities=29%  Similarity=0.512  Sum_probs=53.1

Q ss_pred             eEEEeCc-cccCCCCCCCccEEecCCCCCCCCcEEEEEeccCCCCCCCCCCCceecCHHHHHHhccCchhhhcccCceeE
Q 048390           76 FVTAIGP-SLYKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLE  154 (159)
Q Consensus        76 ~iaAls~-~l~~~G~~CG~C~ec~~~~~C~g~sV~V~VtD~Cp~~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i~  154 (159)
                      +|.+... .-|++ ..||.|+|.+.+  ..+++|.|..+|.-++        .|+|+.+||+.|.+ +++   .+.|+|+
T Consensus        45 FIGg~~~V~gwnS-~~CGtC~~lty~--~~g~si~vlaID~a~~--------Gfnis~~Amn~LT~-G~a---~~lG~V~  109 (122)
T 3sul_A           45 YVGAVDTITGWNS-ESCGTCYQITWS--GTGKTIHVVGVDVAGN--------GFNVGQRAMDDLTN-GQA---VALGNID  109 (122)
T ss_dssp             EEEEETTCCSTTC-TTTTCEEEEEET--TTTEEEEEEEEEECSS--------SEEECHHHHHHHHT-SCH---HHHSEEE
T ss_pred             ccccccccccCCC-CCCCceEEEEEc--CCCcEEEEEEEecCCC--------ceeehHHHHHHhcC-Ccc---eecceEe
Confidence            3666554 44665 999999997754  2489999999999653        69999999999996 333   3469999


Q ss_pred             EEEEC
Q 048390          155 VQYAR  159 (159)
Q Consensus       155 I~~rr  159 (159)
                      ++|++
T Consensus       110 a~~~q  114 (122)
T 3sul_A          110 VTATL  114 (122)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            99874

>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=97.88  E-value=1.8e-05  Score=59.11  Aligned_cols=72  Identities=18%  Similarity=0.400  Sum_probs=52.6

Q ss_pred             CeEEEeCc-cccCCCCCCCccEEecCCCCCCCCcEEEEEeccCCCCCCCCCCCceecCHHHHHHhccCchhhhcccCcee
Q 048390           75 SFVTAIGP-SLYKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVL  153 (159)
Q Consensus        75 ~~iaAls~-~l~~~G~~CG~C~ec~~~~~C~g~sV~V~VtD~Cp~~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i  153 (159)
                      .+|.+... .-|+ ...||.|||.+....-.+++|.|..+|.-++        .|+|+.+||+.|.+ +++.   +.|+|
T Consensus        45 P~IGg~~~i~gwn-S~~CGtC~~lty~g~~~~~si~vlaID~a~~--------Gfnis~~Amn~LT~-G~a~---~lG~V  111 (125)
T 3suk_A           45 PHIGASSDIGGFN-SPACGNCYTISFTFQGVTRSINLVAIDHAGN--------GFNVAQAAMDELTN-GNAV---ALGTI  111 (125)
T ss_dssp             TSEEEETTCCSTT-CTTTTCEEEEEEEETTEEEEEEEEEEEECSS--------SEEECHHHHHHHHT-SCHH---HHCEE
T ss_pred             CeeccccccccCC-CCCCCeeEEEEEcCCCcceEEEEEEEecCCC--------ceeecHHHHHHhcC-Cccc---ccceE
Confidence            56666655 3465 4899999997652001238999999998643        69999999999996 3332   35999


Q ss_pred             EEEEEC
Q 048390          154 EVQYAR  159 (159)
Q Consensus       154 ~I~~rr  159 (159)
                      +++|++
T Consensus       112 ~~~~~~  117 (125)
T 3suk_A          112 DVQSQQ  117 (125)
T ss_dssp             EEEEEE
T ss_pred             eEEEEE
Confidence            999974

>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}

Probab=97.78  E-value=4.2e-05  Score=57.72  Aligned_cols=71  Identities=14%  Similarity=0.181  Sum_probs=52.3

Q ss_pred             CeEEEeCccccCCCCCCCccEEecCCCCCCCCcEEEEEeccCCCCCCCCCCCceecCHHHHHHhccCchhhhcccCceeE
Q 048390           75 SFVTAIGPSLYKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLE  154 (159)
Q Consensus        75 ~~iaAls~~l~~~G~~CG~C~ec~~~~~C~g~sV~V~VtD~Cp~~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i~  154 (159)
                      ..|.+..   | |...||.|+|.+..    +++|.|..+|.-.+      ..-|||+.+||+.|....-+.+-.+.|+|+
T Consensus        48 P~igg~~---w-ns~~CGtCwkLtY~----G~sI~vlaID~a~~------g~~FnIs~~Amn~LT~G~~a~~a~elG~Vd  113 (136)
T 3sum_A           48 PHFVAAP---E-AQTECGSCWKLRYK----GNHAFVTVVDRVEE------ANLFVGGTDLVKNLTTFNGAPEGYDWGTAQ  113 (136)
T ss_dssp             TSEEECC---B-TTBCTTCEEEEEET----TEEEEEEEEECCCS------TTEEEECHHHHHHHTCBTTBCHHHHHSEEE
T ss_pred             Ccccccc---c-CCCCCCceEEEEEC----CeEEEEEEEecCCC------cceEeehHHHHHHHhCCCccccceecceee
Confidence            5677665   5 46899999998754    89999999998643      113999999999999731111125679999


Q ss_pred             E-EEEC
Q 048390          155 V-QYAR  159 (159)
Q Consensus       155 I-~~rr  159 (159)
                      + +|++
T Consensus       114 a~~~~q  119 (136)
T 3sum_A          114 LFSAYQ  119 (136)
T ss_dssp             CSEEEE
T ss_pred             eeEEEE
Confidence            9 8863

>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A

Probab=90.27  E-value=0.11  Score=41.53  Aligned_cols=40  Identities=35%  Similarity=0.496  Sum_probs=27.2

Q ss_pred             CCCCccEEe--cCCCCCCCCcEEEEEeccCCCCCCCCCCCceecCHH
Q 048390           89 KECGGCYQC--TKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGT  133 (159)
Q Consensus        89 ~~CG~C~ec--~~~~~C~g~sV~V~VtD~Cp~~~C~~~~~~~DLS~~  133 (159)
                      ..|++||+.  ++. ...||+.+|+||+...+   - ..+||||..+
T Consensus        84 ~~Cc~C~~LtFt~~-~~~GKkmiVQ~TNtG~D---l-~~n~FDl~iP  125 (210)
T 2eng_A           84 GWCCACYELTFTSG-PVAGKKMVVQSTSTGGD---L-GSNHFDLNIP  125 (210)
T ss_dssp             HHTTCEEEEEECSG-GGTTCEEEEEEEEC---------CCEEEEECT
T ss_pred             cccceeEEEEEcCC-CcCCCEEEEEEecccCC---C-CCCceeEecC
Confidence            459999994  332 24689999999999865   2 3589998643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	159
d1n10a2	143	b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-t	6e-34
d1wc2a1	180	b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mu	1e-15

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 143

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score =  114 bits (286), Expect = 6e-34
 Identities = 60/135 (44%), Positives = 75/135 (55%), Gaps = 8/135 (5%)

Query: 29  PKHLNLSAVGTHWSTAGATWYGSPDGAGND--GGSCGYGNEVSQSPFASFVTAIGPSLYK 86
           P     +  G  W  A +TWYG P GAG    GG+CGY + V + PF+         ++K
Sbjct: 5   PGPNITATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKD-VDKPPFSGMTGCGNTPIFK 63

Query: 87  SGKECGGCYQ--CTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQE 144
           SG+ CG C++  CTK  ACSG+ V V ITD            HFDLSG AFGAMA    E
Sbjct: 64  SGRGCGSCFEIKCTKPEACSGEPVVVHITDDNEEPIAPY---HFDLSGHAFGAMAKKGDE 120

Query: 145 AKLRNAGVLEVQYAR 159
            KLR+AG LE+Q+ R
Sbjct: 121 QKLRSAGELELQFRR 135

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 180

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

 Score = 68.1 bits (166), Expect = 1e-15
 Identities = 29/154 (18%), Positives = 39/154 (25%), Gaps = 48/154 (31%)

Query: 41  WSTAGATWYGSPDGAGNDGGSCGYGNEVSQSPFA----SFVTAIGPSLYKS------GKE 90
            S A  T Y          G+CG G     + F     SFV A     + S      G+ 
Sbjct: 14  KSCASTTNYHDS-----HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQH 68

Query: 91  CGGCYQ---------CTKHPACSGKAVRVVITDFC----------------GGGPFAPES 125
           CG C +             P   G +   +IT+ C                GG       
Sbjct: 69  CGQCIKLTTTGGYVPGQGGPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYE 128

Query: 126 AHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR 159
            H DL       +               E  +  
Sbjct: 129 LHLDLEN-GRSQVTG-------MGWNNPETTWEV 154

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	159
d1n10a2	143	Pollen allergen PHL P 1 N-terminal domain {Timothy	100.0
d1wc2a1	180	Endoglucanase (CMCase) {Blue mussel (Mytilus eduli	99.96
d1bw3a_	125	Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}	98.23
d2enga_	210	Endoglucanase V (Eng V) {Humicola insolens [TaxId:	87.59

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=100.00  E-value=1.2e-38  Score=242.73  Aligned_cols=120  Identities=49%  Similarity=0.922  Sum_probs=103.9

Q ss_pred             ccCCCeeEEEEEEeCCCCCCCC--CcCCCCCCCCCCCCCCCCeEEEeCccccCCCCCCCccEE--ecCCCCCCCCcEEEE
Q 048390           36 AVGTHWSTAGATWYGSPDGAGN--DGGSCGYGNEVSQSPFASFVTAIGPSLYKSGKECGGCYQ--CTKHPACSGKAVRVV  111 (159)
Q Consensus        36 ~~~~~w~~g~aT~Y~~~~~~g~--~~GACGyg~~~~~~~~~~~iaAls~~l~~~G~~CG~C~e--c~~~~~C~g~sV~V~  111 (159)
                      ++.++|++|+||||+.+++.++  .+|||||++ ++..+++.++||+|+.+|++|..||+|||  |.++..|.+++|+|+
T Consensus        12 ~~~~~w~~g~AT~Yg~~~~~~~~~~gGACGyg~-~~~~p~g~~~aAls~~l~~~g~~CG~cyev~c~~~~~c~~~sv~V~   90 (143)
T d1n10a2          12 TYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKD-VDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVH   90 (143)
T ss_dssp             BCCCSCEEEEEEEEC----------CCTTCCCC-TTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSSTTBCSCCEEEE
T ss_pred             ccCCCcEeeEEeEeCCCCCCCCCCCcccCCCCC-cccCCCcceEEEeCHhHccCCCcCCcceEeEcCCCCcccCCCEEEE
Confidence            7889999999999999887664  479999999 77778999999999999999999999999  777778999999999


Q ss_pred             EeccCCCCCCCCCCCceecCHHHHHHhccCchhhhcccCceeEEEEEC
Q 048390          112 ITDFCGGGPFAPESAHFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR  159 (159)
Q Consensus       112 VtD~Cp~~~C~~~~~~~DLS~~AF~kia~~~~~~~l~~~G~i~I~~rr  159 (159)
                      |||.||+  | .+.+|||||+.||++||+++++.+|++.|+|+|+|||
T Consensus        91 vtd~c~~--~-~~~~hfDLS~~AF~~iA~~~~~~~~~~~Giv~V~yRr  135 (143)
T d1n10a2          91 ITDDNEE--P-IAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRR  135 (143)
T ss_dssp             EEEECSS--C-SSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEE
T ss_pred             EEecccC--C-CCCccccCCHHHHhhhccccchhhheecCccceEEEE
Confidence            9999995  3 3468999999999999999989999999999999998

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

Probab=99.96  E-value=1.1e-30  Score=204.89  Aligned_cols=107  Identities=25%  Similarity=0.368  Sum_probs=89.8

Q ss_pred             CeeEEEEEEeCCCCCCCCCcCCCCCCCCCCC----CCCCCeEEEeCccccCC------CCCCCccEE--ecCCCC-----
Q 048390           40 HWSTAGATWYGSPDGAGNDGGSCGYGNEVSQ----SPFASFVTAIGPSLYKS------GKECGGCYQ--CTKHPA-----  102 (159)
Q Consensus        40 ~w~~g~aT~Y~~~~~~g~~~GACGyg~~~~~----~~~~~~iaAls~~l~~~------G~~CG~C~e--c~~~~~-----  102 (159)
                      .|+.+++|||+++     .+|||||+++...    .+++.+|||+|+.||++      |+.||+|||  |++...     
T Consensus        13 g~~~A~aT~Ygd~-----~~GACGyG~~~~~~~~~~g~G~~tAAlS~~lf~~~~~~~~G~~CG~CyeV~C~~~~~~~~~~   87 (180)
T d1wc2a1          13 GKSCASTTNYHDS-----HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGG   87 (180)
T ss_dssp             TEEEEEEEEECCC-----BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCC
T ss_pred             CccccceEEeCCC-----CCCCCCCCcCCCCCccccCCcceEeeccHHHhcCCcccccccccCCEEEEEECCCCCCccCC
Confidence            6999999999975     4799999995433    34568999999999999      899999999  655322     


Q ss_pred             -C-CCCcEEEEEeccCCC-----CCCCCCCC-----------ceecCHHHHHHhccCchhhhcccCceeEEEEEC
Q 048390          103 -C-SGKAVRVVITDFCGG-----GPFAPESA-----------HFDLSGTAFGAMAIPSQEAKLRNAGVLEVQYAR  159 (159)
Q Consensus       103 -C-~g~sV~V~VtD~Cp~-----~~C~~~~~-----------~~DLS~~AF~kia~~~~~~~l~~~G~i~I~~rr  159 (159)
                       | .+++|+|||||+||.     +||.+++.           ||||+ ++|.+||.       +..|+|+|+|||
T Consensus        88 ~~~~g~sV~V~iTd~CP~n~~n~gWCn~p~~~~~~n~~g~~~HFDLs-~af~~ia~-------~~~G~v~V~yrr  154 (180)
T d1wc2a1          88 PVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLE-NGRSQVTG-------MGWNNPETTWEV  154 (180)
T ss_dssp             CCCTTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEE-CTTSTTGG-------GTCSSEEEEEEE
T ss_pred             CCCCCCcEEEEEEecCCCCCCCCCccCCccccccccccCcccceech-HHHHHHhh-------hcCCcceeEEEE
Confidence             2 368999999999995     59976544           99998 59999999       899999999997

>d1bw3a_ b.52.1.2 (A:) Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Barwin
domain: Barwin
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=98.23  E-value=2.2e-07  Score=66.57  Aligned_cols=62  Identities=26%  Similarity=0.512  Sum_probs=48.7

Q ss_pred             cCCCCCCCccEEecCCCCCCCCcEEEEEeccCCCCCCCCCCCceecC-HHHHHHhccCchhhhcccCceeEEEEE
Q 048390           85 YKSGKECGGCYQCTKHPACSGKAVRVVITDFCGGGPFAPESAHFDLS-GTAFGAMAIPSQEAKLRNAGVLEVQYA  158 (159)
Q Consensus        85 ~~~G~~CG~C~ec~~~~~C~g~sV~V~VtD~Cp~~~C~~~~~~~DLS-~~AF~kia~~~~~~~l~~~G~i~I~~r  158 (159)
                      ...-..||+|+++++.  -+|.+|+|+|+|+|..       +.|||. +..|++|-..|++   ...|-+.|.|+
T Consensus        57 p~gq~sCGkclrvTN~--atga~~~~RiVDqCsn-------gGlDLD~~~vFn~iDtdG~G---~~~Ghl~V~y~  119 (125)
T d1bw3a_          57 PRGQAACGKCLRVTNP--ATGAQITARIVDQCAN-------GGLDLDWDTVFTKIDTNGIG---YQQGHLNVNYQ  119 (125)
T ss_dssp             CCSGGGTTCEEEEEET--TTTEEEEEEEEECCSS-------SSCCSCSSSSHHHHCSSCHH---HHHSEEEEEEE
T ss_pred             CcCcccccceEEeeec--ccCcEEEEEEeecccC-------CCCccccHhhhheecCCCcc---cccccEEEEEE
Confidence            3445779999999875  3689999999999753       689999 6799999875555   66787777664

>d2enga_ b.52.1.1 (A:) Endoglucanase V (Eng V) {Humicola insolens [TaxId: 34413]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase V (Eng V)
species: Humicola insolens [TaxId: 34413]

Probab=87.59  E-value=0.1  Score=39.78  Aligned_cols=40  Identities=35%  Similarity=0.487  Sum_probs=26.7

Q ss_pred             CCCCccEEe--cCCCCCCCCcEEEEEeccCCCCCCCCCCCceecCHH
Q 048390           89 KECGGCYQC--TKHPACSGKAVRVVITDFCGGGPFAPESAHFDLSGT  133 (159)
Q Consensus        89 ~~CG~C~ec--~~~~~C~g~sV~V~VtD~Cp~~~C~~~~~~~DLS~~  133 (159)
                      ..|.+|||.  ++. .-.||..+|+||+.--+    ...+||||..+
T Consensus        84 ~~Cc~Cy~LtFTs~-~~~GKkMiVQ~tNTGgD----lg~n~FDl~iP  125 (210)
T d2enga_          84 GWCCACYELTFTSG-PVAGKKMVVQSTSTGGD----LGSNHFDLNIP  125 (210)
T ss_dssp             HHTTCEEEEEECSG-GGTTCEEEEEEEEC---------CCEEEEECT
T ss_pred             ccccccEEEEeecC-CcCCCEEEEEEeccCCc----cCCCeeeEecc
Confidence            559999994  421 13589999999998654    23589999653