Citrus Sinensis ID: 048504

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------
Protein Sequence
MAESEKNLEISSKASSSSSSMLLNRSFTMHATAADSSLPKLNYASLNRAASSNKFYNSMESVLAASNSFKGKVKQLRNLFEPKKSSKKINLNEPESPQQHHLIKLTKPVKSLSLCYNNESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDCCSS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccHHHHHHcccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHccccccccccccccEEEEEHHHHHHHHHHcccHHHccccccccccccccccccccEEEccccccccEEEEcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccHHHccccccccccccccccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHcccEEEcccccccHHHHHHHHHHHccccccccEEEEcccEcccHHHHHHHHHccHHHHHHcccccccccccccccccEEEEEcccccccEEEEEccccEEEEcccccccccEEccccccc
Coil and Loop (DISEMBL)
maeseknleisskassssssmllnrSFTMhataadsslpklnyASLNRAASSNKFYNSMESVLAASNSFKGKVKQLRNlfepkksskkinlnepespqqhhlikltkpvkslslcynnessirlpgteDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRvwvderdvsmdSAYKKELQCvfggknvtlpqvfirgkhvgnaDVLKSMYETGELArvldgfprrqpgfvcgscgdvrfvpcgncsgsrkvfdeadgvpkrclecnenglircpdccss
Flexible Loop (DISEMBL)
maeseknleisskassssssMLLNRSFTMHATAADSSLPKLNYASLNRAASSNKFYNSMESVLAASNSFKGKVKQLRNLFepkksskkinlnepespqqhhlikltkPVKSLSLCYNNessirlpgtedrIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSgsrkvfdeadgvpkrclecnenglircpdccss
Low Complexity Region (SEG)
MAESEKNLEIsskassssssMLLNRSFTMHATAADSSLPKLNYASLNRAASSNKFYNSMESVLAASNSFKGKVKQLRNLFEPKKSSKKINLNEPESPQQHHLIKLTKPVKSLSLCYNNESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDCCSS
Disordered region (IsUnstruct)
*****************************************************************************************************LIKLTKPVKSLSLCYNNESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDCC**
Disordered Region (DISOPRED)
******************************************************************************************************************************TEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG*KNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDCCS*
Disordered Region (DISEMBL)
*********************LLNRSFTMHATAADSSLPKLNYASLNRAASSNKFYNSMESVLAASNSFKGKVKQLRNLFEPKKSSKKINLNEPESPQQHHLIKLTKPVKSLSLCYNNESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDCCSS
Disordered Region (DISPRO)
*******************************************************************************F***************************************SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDCC**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAESEKNLEISSKASSSSSSMLLNRSFTMHATAADSSLPKLNYASLNRAASSNKFYNSMESVLAASNSFKGKVKQLRNLFEPKKSSKKINLNEPESPQQHHLIKLTKPVKSLSLCYNNESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDCCSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	277	2.2.26 [Sep-21-2011]
Q9FLE8	390	Uncharacterized protein A	no	no	0.534	0.379	0.451	9e-33
Q9LH89	428	Uncharacterized protein A	no	no	0.534	0.345	0.410	2e-30
Q50H32	290	Glutaredoxin domain-conta	yes	no	0.523	0.5	0.424	3e-24
A8MXD5	290	Glutaredoxin domain-conta	yes	no	0.570	0.544	0.4	3e-24
Q9VNL4	454	Glutaredoxin domain-conta	yes	no	0.523	0.319	0.342	3e-24
Q9W4S1	582	Glutaredoxin domain-conta	no	no	0.523	0.249	0.328	3e-24
Q8H7F6	293	Monothiol glutaredoxin-S1	no	no	0.425	0.402	0.302	0.0002
Q0JM76	185	Monothiol glutaredoxin-S4	no	no	0.314	0.470	0.277	0.0007

>sp|Q9FLE8|Y5986_ARATH Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=1 SV=1

 Score =  140 bits (353), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 75/166 (45%), Positives = 107/166 (64%), Gaps = 18/166 (10%)

Query: 128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGK--- 184
           ++R+V+Y TSLRGIR+T+EDC  +R+I +   + +DERDVSM S +K EL+ +  GK   
Sbjct: 224 KERVVLYFTSLRGIRKTYEDCCNIRIILKSLGIRIDERDVSMHSGFKDELKKLLEGKFNN 283

Query: 185 --NVTLPQVFIRGKHVGNADVLKSMYETGELARVL---DGFPRRQPGF--VCGSCGDVRF 237
              +TLP+VF+  K++G  + +K + E GEL +++   +      PGF   C +CGDVRF
Sbjct: 284 GVGITLPRVFLGNKYLGGVEEIKKLNENGELEKLIKDCEMVEDGSPGFGNECEACGDVRF 343

Query: 238 VPCGNCSGSRKVF----DEADGVP----KRCLECNENGLIRCPDCC 275
           VPC  CSGS K++    +E +GV     +RC  CNENGLIRC  CC
Sbjct: 344 VPCETCSGSCKLYHEGEEEDEGVTEYGFQRCPYCNENGLIRCHVCC 389

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LH89|Y3885_ARATH Uncharacterized protein At3g28850 OS=Arabidopsis thaliana GN=At3g28850 PE=1 SV=1

 Score =  133 bits (334), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 106/178 (59%), Gaps = 30/178 (16%)

Query: 128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG----- 182
           ++R+++Y TSLRGIR+T+E+   VR+I +   + VDERDVSM S +K EL+ + G     
Sbjct: 250 KERVILYFTSLRGIRKTYEESCDVRVILKSLGIRVDERDVSMHSGFKDELKELLGEKFNK 309

Query: 183 GKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQP-----GFVCGSCGDVRF 237
           G  +TLP+VF+  K++G A+ ++ + E G+L ++L G  R +      G  C +CGDVRF
Sbjct: 310 GVGITLPRVFLGRKYIGGAEEIRKLNEDGKLEKLLGGCERVEENQNGNGLECEACGDVRF 369

Query: 238 VPCGNCSGSRKVF--------------------DEADGVPKRCLECNENGLIRCPDCC 275
           VPC  CSGS KV+                    +E +   + C +CNENGLIRCP CC
Sbjct: 370 VPCETCSGSCKVYYEYEDDDDDDDEGDDDESVKEEREYGFQTCPDCNENGLIRCPVCC 427

Arabidopsis thaliana (taxid: 3702)

>sp|Q50H32|GRCR1_MOUSE Glutaredoxin domain-containing cysteine-rich protein 1 OS=Mus musculus GN=Grxcr1 PE=1 SV=1

 Score =  112 bits (280), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/153 (42%), Positives = 88/153 (57%), Gaps = 8/153 (5%)

Query: 129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKEL--QCVFGGKNV 186
           DR+V+Y T LR +R TFE C  VR IF+  RV  +E++++++  Y KEL  +C    +  
Sbjct: 137 DRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGDYGKELDERCRRVSEAP 196

Query: 187 TLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSGS 246
           +LP VFI G ++G A+ + SM E+GEL  +L    R Q    C SCG   F+PC  C GS
Sbjct: 197 SLPVVFIDGHYLGGAEKILSMNESGELQDLLTKIERVQHPHECPSCGGFGFLPCSVCHGS 256

Query: 247 -----RKVFDEADGVPKRCLECNENGLIRCPDC 274
                R  F +A    K C  CNENGL RC +C
Sbjct: 257 KMSVFRNCFTDAFKALK-CTACNENGLQRCKNC 288

May play a role in actin filament architecture in developing stereocilia of sensory cells.

Mus musculus (taxid: 10090)

>sp|A8MXD5|GRCR1_HUMAN Glutaredoxin domain-containing cysteine-rich protein 1 OS=Homo sapiens GN=GRXCR1 PE=1 SV=1

 Score =  112 bits (280), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/170 (40%), Positives = 97/170 (57%), Gaps = 12/170 (7%)

Query: 116 YNNESSI-RLPGTE---DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS 171
           +NN + + + P T+   DR+V+Y T LR +R TFE C  VR IF+  RV  +E++++++ 
Sbjct: 120 FNNLTKVLQQPSTDLEFDRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNG 179

Query: 172 AYKKEL--QCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVC 229
            Y KEL  +C    +  +LP VFI G ++G A+ + SM E+GEL  +L    R Q    C
Sbjct: 180 EYGKELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDILTKIERVQHPHEC 239

Query: 230 GSCGDVRFVPCGNCSGS-----RKVFDEADGVPKRCLECNENGLIRCPDC 274
            SCG   F+PC  C GS     R  F ++    K C  CNENGL RC +C
Sbjct: 240 PSCGGFGFLPCSVCHGSKMSMFRNCFTDSFKALK-CTACNENGLQRCKNC 288

May play a role in actin filament architecture in developing stereocilia of sensory cells.

Homo sapiens (taxid: 9606)

>sp|Q9VNL4|GRCR1_DROME Glutaredoxin domain-containing cysteine-rich protein CG31559 OS=Drosophila melanogaster GN=CG31559 PE=1 SV=2

 Score =  112 bits (280), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 88/149 (59%), Gaps = 4/149 (2%)

Query: 130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLP 189
           ++V+Y TS+  IR T+  C  V+ I R   V  +ERDV M   Y+ E++       V +P
Sbjct: 306 KVVLYTTSMGIIRETYTKCANVKQILRTLLVKFEERDVFMSVEYQAEMRQRMQSGQVRVP 365

Query: 190 QVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSGSRKV 249
           Q+++ G+H+G+A+ ++ M E+GEL ++L  +      + C +CG  R +PC +C+GS+K 
Sbjct: 366 QLYVEGQHIGDAETVERMNESGELRQLLKPYKSMASTYTCQTCGGYRLLPCPSCNGSKKS 425

Query: 250 FDE----ADGVPKRCLECNENGLIRCPDC 274
                  A+ V  +C+ C+E GL++C +C
Sbjct: 426 VHRNHFTAEFVALKCMNCDEVGLVKCHNC 454

Drosophila melanogaster (taxid: 7227)

>sp|Q9W4S1|GRCR2_DROME Glutaredoxin domain-containing cysteine-rich protein CG12206 OS=Drosophila melanogaster GN=CG12206 PE=2 SV=2

 Score =  112 bits (280), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 90/149 (60%), Gaps = 4/149 (2%)

Query: 130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLP 189
           ++V+Y TS+  IR T+  C  V+ I R   +  +ERD+ M   Y++E++     + + +P
Sbjct: 434 KVVLYTTSMGIIRDTYAKCANVKKILRTLLIKFEERDIFMSVEYQQEMRERMQDETIRVP 493

Query: 190 QVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSGSRKV 249
           Q+F+ G+ +G+A++++ + E+GEL ++L  +      + C +CG  R +PC  C+GS+K 
Sbjct: 494 QLFVEGQLIGDANIVERLNESGELRQLLRPYKSIATAYTCQTCGGYRMLPCPACNGSKKS 553

Query: 250 FDE----ADGVPKRCLECNENGLIRCPDC 274
                  A+ V  +C+ C+E GLI+CP+C
Sbjct: 554 MHRNHFTAEFVALKCMNCDEVGLIKCPNC 582

Drosophila melanogaster (taxid: 7227)

>sp|Q8H7F6|GRS16_ARATH Monothiol glutaredoxin-S16, chloroplastic OS=Arabidopsis thaliana GN=GRXS16 PE=2 SV=2

 Score = 47.0 bits (110), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 11/129 (8%)

Query: 95  ESPQQHHLIKLTKPVKSLSLCYNNESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMI 154
           ++P++   I+LT P + + L    E  I     E ++V ++   +G R   +  ++ R++
Sbjct: 171 QTPRKKSDIRLT-PGRHVELTVPLEELIDRLVKESKVVAFI---KGSRSAPQCGFSQRVV 226

Query: 155 FRGFRVWVDERDVS-MDSAYKKELQCVFGGKNV----TLPQVFIRGKHVGNADVLKSMYE 209
                  VD   V  +D  Y   L+     KN     T PQ+F++G+ VG  D+L SMYE
Sbjct: 227 GILESQGVDYETVDVLDDEYNHGLRETL--KNYSNWPTFPQIFVKGELVGGCDILTSMYE 284

Query: 210 TGELARVLD 218
            GELA +L+
Sbjct: 285 NGELANILN 293

May only reduce GSH-thiol disulfides, but not protein disulfides.

Arabidopsis thaliana (taxid: 3702)

>sp|Q0JM76|GRXS4_ORYSJ Monothiol glutaredoxin-S4, mitochondrial OS=Oryza sativa subsp. japonica GN=GRXS4 PE=2 SV=1

 Score = 44.7 bits (104), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)

Query: 128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVT 187
           E+ +++Y+       R      AVR + + + V +  RD+  D   K+ ++        T
Sbjct: 86  ENPVLIYMKGYPDAPRCGFSALAVR-VLKQYDVPISARDILGDLKLKESVKAHTNWP--T 142

Query: 188 LPQVFIRGKHVGNADVLKSMYETGELARVL 217
            PQ+FI+G+ VG +D++  M++ G+L  VL
Sbjct: 143 FPQIFIKGEFVGGSDIILDMHQKGQLKDVL 172

May only reduce GSH-thiol disulfides, but not protein disulfides.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	277
307136387	267	glutaredoxin family protein [Cucumis mel	0.960	0.996	0.631	2e-90
255544013	274	electron transporter, putative [Ricinus	0.924	0.934	0.640	3e-90
224075836	259	hypothetical protein POPTRDRAFT_817620 [	0.906	0.969	0.626	3e-89
224053276	266	hypothetical protein POPTRDRAFT_708496 [	0.913	0.951	0.626	5e-89
449524026	267	PREDICTED: uncharacterized protein At5g3	0.960	0.996	0.613	2e-87
449449350	267	PREDICTED: uncharacterized protein At5g3	0.960	0.996	0.610	4e-87
225465921	268	PREDICTED: uncharacterized protein At5g3	0.931	0.962	0.6	4e-82
297807405	270	glutaredoxin family protein [Arabidopsis	0.960	0.985	0.589	4e-81
15240723	274	Glutaredoxin family protein [Arabidopsis	0.971	0.981	0.594	5e-80
357456689	283	hypothetical protein MTR_3g017490 [Medic	0.877	0.858	0.544	1e-72

>gi|307136387|gb|ADN34197.1| glutaredoxin family protein [Cucumis melo subsp. melo]

 Score =  337 bits (865), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 175/277 (63%), Positives = 206/277 (74%), Gaps = 11/277 (3%)

Query: 1   MAESEKNLEISSKASSSSSSMLLNRSFTMHATAADSSLPKLNY-ASLNRAASSNKFYNSM 59
           MAE +++ + S K  SS      NRS T+H+++ DSS  K    ASLNR  S  K+Y+ +
Sbjct: 1   MAEFDRSTQFSEKPKSS----FFNRSLTLHSSSMDSSTKKPYLRASLNRTDSVKKYYSPL 56

Query: 60  ESVLAASNSFKGKVKQLRNLFEPKKSSKKINLNEPESPQQHHLIKLTKPVKSLSLCYNNE 119
           ES+ +ASNSFKGKVKQL NLFE  KSS   +        QH +    K  KS    +   
Sbjct: 57  ESMKSASNSFKGKVKQLCNLFEGAKSSSSPSEG-----SQHQIQTKLKSTKSFGSDFRV- 110

Query: 120 SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQC 179
            SIRLPGTEDRIVVYLTSLRGIRRT+EDCYAVR+IFRGFRVWVDERD+SMDSAYKKELQ 
Sbjct: 111 PSIRLPGTEDRIVVYLTSLRGIRRTYEDCYAVRIIFRGFRVWVDERDISMDSAYKKELQS 170

Query: 180 VFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVP 239
           V G KNV+LPQVFIRGKHVG A+V+K ++E GEL ++L+GFP R+PGFVC  CGDVRFVP
Sbjct: 171 VLGEKNVSLPQVFIRGKHVGGAEVIKQLFEAGELVKILEGFPIREPGFVCEGCGDVRFVP 230

Query: 240 CGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDCCS 276
           C  CSGSRKVFDE + V KRCL+CNENGLIRCP+C S
Sbjct: 231 CMTCSGSRKVFDEDEQVLKRCLDCNENGLIRCPECAS 267

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544013|ref|XP_002513069.1| electron transporter, putative [Ricinus communis] gi|223548080|gb|EEF49572.1| electron transporter, putative [Ricinus communis]

 Score =  337 bits (864), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 182/284 (64%), Positives = 209/284 (73%), Gaps = 28/284 (9%)

Query: 1   MAESEKNLEISSKASSSS-SSMLLNRSFTMHATAADSSLPKLNYASLNRAASSNKFYNSM 59
           MAE E N+E + K+  S+ +S L NRS T+H+T    S PK      +   S ++FYNS+
Sbjct: 1   MAELESNMEFNGKSKPSTMASSLFNRSLTIHST---KSSPK------DYVQSPSRFYNSI 51

Query: 60  ESVLAASNSFKGKVKQLRNLFEPKKSSKKINLNEPESPQQHHLIKLTKPVKSLSLCYN-- 117
           ES+       KGKVK+L N+FE  ++ K I LNE    Q   L    K VKS+   YN  
Sbjct: 52  ESM-------KGKVKKLCNIFESSRTPKSI-LNESLLAQAKKL----KSVKSMGPEYNRY 99

Query: 118 ----NESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAY 173
               N S IRLPGTEDRIVVYLTSLRGIRRT+EDCYAVRMIFRGFRV VDERD+SMDSAY
Sbjct: 100 NYGFNNSGIRLPGTEDRIVVYLTSLRGIRRTYEDCYAVRMIFRGFRVCVDERDISMDSAY 159

Query: 174 KKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCG 233
           KKELQ V G KN +LPQVFIRG HVG A+V+K M+ETGELA+VLDGFPRR+PGFVC  CG
Sbjct: 160 KKELQSVLGEKNASLPQVFIRGNHVGGAEVIKLMFETGELAKVLDGFPRREPGFVCDRCG 219

Query: 234 DVRFVPCGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDCCSS 277
           DVRFVPCGNCSGSRKVFDE +GV KRCLECNENGLIRC DCC +
Sbjct: 220 DVRFVPCGNCSGSRKVFDEDEGVLKRCLECNENGLIRCIDCCEA 263

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075836|ref|XP_002304790.1| hypothetical protein POPTRDRAFT_817620 [Populus trichocarpa] gi|222842222|gb|EEE79769.1| hypothetical protein POPTRDRAFT_817620 [Populus trichocarpa]

 Score =  334 bits (856), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 178/284 (62%), Positives = 207/284 (72%), Gaps = 33/284 (11%)

Query: 1   MAESEKNLEISSKASSSSSSM----LLNRSFTMHATAADSSLPKLNYASLNRAASSNKFY 56
           MAE E N EI+  +  +++ M    + NRS T+H+T+   + P L         S++ FY
Sbjct: 1   MAEFENNQEITPNSKPTTNKMTSSSIFNRSLTIHSTSV--TKPYLQ--------STSGFY 50

Query: 57  NSMESVLAASNSFKGKVKQLRNLFEPKKSSKKINLNEPESPQQHHLIKLTKPVKSLSLCY 116
           NS ES+       KGKVK+LR+LFE    S K N NE     Q    K  + VKS+   Y
Sbjct: 51  NSFESM-------KGKVKKLRSLFE----SPKPNPNE----LQIQATKKLQSVKSMGPDY 95

Query: 117 N----NESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSA 172
           N    N++ IRLPGTEDRIVVYLTSLRGIRRT+EDCYAV+MIFRGFRVWVDERD+SMDSA
Sbjct: 96  NRFPVNDNRIRLPGTEDRIVVYLTSLRGIRRTYEDCYAVKMIFRGFRVWVDERDISMDSA 155

Query: 173 YKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSC 232
           YKKELQ V G KNV+LPQVFIRG HVG A+V+K M+ETGE+ARVLDGFPRR  GFVC  C
Sbjct: 156 YKKELQSVLGEKNVSLPQVFIRGNHVGGAEVIKQMFETGEMARVLDGFPRRLAGFVCAGC 215

Query: 233 GDVRFVPCGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDCCS 276
           GDVRFVPCGNCSGSRK+FDE +GV KRCLECNENGLIRC DCCS
Sbjct: 216 GDVRFVPCGNCSGSRKLFDEDEGVLKRCLECNENGLIRCSDCCS 259

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053276|ref|XP_002297745.1| hypothetical protein POPTRDRAFT_708496 [Populus trichocarpa] gi|222845003|gb|EEE82550.1| hypothetical protein POPTRDRAFT_708496 [Populus trichocarpa]

 Score =  333 bits (854), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 181/289 (62%), Positives = 211/289 (73%), Gaps = 36/289 (12%)

Query: 1   MAESEKNLEI--SSKASS--SSSSMLLNRSFTMH-ATAADSSLPKLNYASLNRAASSNKF 55
           MAE EKN EI  +SK ++  ++SS + NRS T+H A+ A+S L            S+++F
Sbjct: 1   MAEVEKNQEIIPNSKPATKNTTSSSIFNRSVTIHSASLANSYL-----------QSTSRF 49

Query: 56  YNSMESVLAASNSFKGKVKQLRNLFEPKKSSKKINLNEPESPQQHHLIKLTKPVKSLSLC 115
           YNS ES+       KGKVK+LR+LFE  K  +K N +E +    H L    +  KS+   
Sbjct: 50  YNSFESM-------KGKVKKLRSLFESPKP-QKPNPDELQIQATHKL----QSFKSMGPE 97

Query: 116 YN--------NESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDV 167
           YN        N S IRLPGTEDRIVVYLTSLRG+RRT+EDCYAVRMIFRGFRVW+DERDV
Sbjct: 98  YNRFPSFGFINNSKIRLPGTEDRIVVYLTSLRGVRRTYEDCYAVRMIFRGFRVWIDERDV 157

Query: 168 SMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGF 227
           SMDSAYKKELQ V G KNV+LPQVFIRG HVG A+V+K M+ETGEL RVLD FPR+QPGF
Sbjct: 158 SMDSAYKKELQSVLGEKNVSLPQVFIRGDHVGGAEVIKQMFETGELVRVLDRFPRQQPGF 217

Query: 228 VCGSCGDVRFVPCGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDCCS 276
           VC  CG  RFVPCGNCSGSRK+FDE +GV KRCLECNENGLIRCPDCCS
Sbjct: 218 VCEGCGGARFVPCGNCSGSRKLFDEDEGVLKRCLECNENGLIRCPDCCS 266

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449524026|ref|XP_004169024.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus]

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 170/277 (61%), Positives = 203/277 (73%), Gaps = 11/277 (3%)

Query: 1   MAESEKNLEISSKASSSSSSMLLNRSFTMHATAADSSLPKLNY-ASLNRAASSNKFYNSM 59
           MA+ +++ + S K  S+      NRS T+H++A D+S  K    ASLNR  S  K+Y+  
Sbjct: 1   MADFDRSKQFSEKPKSA----FFNRSLTLHSSAMDASTKKPYLRASLNRTDSVKKYYSPF 56

Query: 60  ESVLAASNSFKGKVKQLRNLFEPKKSSKKINLNEPESPQQHHLIKLTKPVKSLSLCYNNE 119
           ESV +ASNS KGKVKQL +LFE  KSS   +        QH +    K  KS    +   
Sbjct: 57  ESVKSASNSIKGKVKQLCHLFEGAKSSSSPSEG-----SQHQIQTKLKSTKSFGSDFRV- 110

Query: 120 SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQC 179
            SIRLPGTEDRIVVYLTSLRGIRRT+EDCYAVR+IFRGFRVWVDERD+SMDSAY+KELQ 
Sbjct: 111 PSIRLPGTEDRIVVYLTSLRGIRRTYEDCYAVRIIFRGFRVWVDERDISMDSAYRKELQS 170

Query: 180 VFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVP 239
           V G KNV+LPQVFIRGKHVG A+V+K ++E GEL ++L+GFP R+PGFVC  CGDVRFVP
Sbjct: 171 VLGEKNVSLPQVFIRGKHVGGAEVIKQLFEAGELVKILEGFPIREPGFVCEGCGDVRFVP 230

Query: 240 CGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDCCS 276
           C  CSGSRKV+DE + V KRCL+CNENGLIRCP C S
Sbjct: 231 CMTCSGSRKVYDEDEQVLKRCLDCNENGLIRCPGCAS 267

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449350|ref|XP_004142428.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus]

 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 169/277 (61%), Positives = 203/277 (73%), Gaps = 11/277 (3%)

Query: 1   MAESEKNLEISSKASSSSSSMLLNRSFTMHATAADSSLPKLNY-ASLNRAASSNKFYNSM 59
           MA+ +++ + S K  S+      NRS T+H++A D+S  K    ASLNR  S  K+Y+  
Sbjct: 1   MADFDRSKQFSEKPKSA----FFNRSLTLHSSAMDASTKKPYLRASLNRTDSVKKYYSPF 56

Query: 60  ESVLAASNSFKGKVKQLRNLFEPKKSSKKINLNEPESPQQHHLIKLTKPVKSLSLCYNNE 119
           ESV +ASNS KGKVKQL +LFE  KSS   +        QH +    K  KS    +   
Sbjct: 57  ESVKSASNSIKGKVKQLCHLFEGAKSSSSPSEG-----SQHQIQTKLKSTKSFGSDFRV- 110

Query: 120 SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQC 179
            SIRLPGTEDRIVVYLTSLRGIRRT+EDCYAVR+IFRGFRVWVDERD+SMDSAY+KELQ 
Sbjct: 111 PSIRLPGTEDRIVVYLTSLRGIRRTYEDCYAVRIIFRGFRVWVDERDISMDSAYRKELQS 170

Query: 180 VFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVP 239
           V G KNV+LPQVFIRGKHVG A+V+K ++E GEL ++L+GFP R+PGFVC  CGDVRFVP
Sbjct: 171 VLGEKNVSLPQVFIRGKHVGGAEVIKQLFEAGELVKILEGFPIREPGFVCEGCGDVRFVP 230

Query: 240 CGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDCCS 276
           C  CSGSRKV+DE + V KRCL+CNENGL+RCP C S
Sbjct: 231 CMTCSGSRKVYDEDEQVLKRCLDCNENGLVRCPGCAS 267

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465921|ref|XP_002270142.1| PREDICTED: uncharacterized protein At5g39865-like [Vitis vinifera] gi|452114382|gb|AGG09348.1| glutaredoxin [Vitis vinifera]

 Score =  310 bits (794), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 162/270 (60%), Positives = 193/270 (71%), Gaps = 12/270 (4%)

Query: 10  ISSKASSSSSSMLLNRSFTMHATAADSSLPKLNYASLNRAASSNKFYNSMESVLAASNSF 69
             S   S S      RS T+     ++         L+R+ S  KFYNS ESV++  NS 
Sbjct: 8   FGSFGKSKSRPFFFGRSMTVREAPIEA-------PQLDRSGSMRKFYNSFESVISTGNSI 60

Query: 70  KGKVKQLRNLFEPKKSSKKINLNEPESPQQHHL--IKL-TKPVKSLSLCYNNESSIRLPG 126
           KGKVK+L +LFE    S+  +  +  S     L   KL T  ++  SL  N+   I LPG
Sbjct: 61  KGKVKKLCSLFEKADDSQSQSQPQSRSQSPTKLKASKLGTTDLRVSSLSGNH--WIGLPG 118

Query: 127 TEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNV 186
            EDRIVVY TSLRGIRRT+EDCYAVRMIFR FRVWVDERD+SMDSAY+KELQCV G KNV
Sbjct: 119 AEDRIVVYFTSLRGIRRTYEDCYAVRMIFRAFRVWVDERDISMDSAYRKELQCVLGEKNV 178

Query: 187 TLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSGS 246
           +LPQVFIRGK++G ADV+K +YETGELA++L+GFP R PG+VC SCGDVRF+PC +CSGS
Sbjct: 179 SLPQVFIRGKYMGGADVVKQLYETGELAKILEGFPVRAPGYVCESCGDVRFIPCMDCSGS 238

Query: 247 RKVFDEADGVPKRCLECNENGLIRCPDCCS 276
           RKVFDE +G+ KRCLECNENGLIRCPDCCS
Sbjct: 239 RKVFDEDEGLLKRCLECNENGLIRCPDCCS 268

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297807405|ref|XP_002871586.1| glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata] gi|297317423|gb|EFH47845.1| glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 165/280 (58%), Positives = 195/280 (69%), Gaps = 14/280 (5%)

Query: 1   MAESEKNLEISSKASSSSSSMLLNRSFTMHATAADSSLPK---LNYASLNRAASSNKFYN 57
           MA  +KN   + K  S+++S   NRS T+H      S PK   LN  SLNR  S  KFY 
Sbjct: 1   MAGLDKN---AGKTKSATTSSFFNRSLTIHGRTVVDSSPKSHNLN-PSLNRTTSITKFYT 56

Query: 58  SMESVLAASNSFKGKVKQLRNLFEPKKSSKKINLNEPESPQQHHLIKLTKPVKSLSLCYN 117
            +ES+    +S KGKVK L  LFE   SSK +     E PQ+    K   P   +S  ++
Sbjct: 57  PVESM---GSSLKGKVKNLCRLFE---SSKPVKPASAEIPQKQKSGKSLLPESRISPFFS 110

Query: 118 -NESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKE 176
            N S IRLPGTEDRIVVY TSLRGIRRT+EDCYAVRMIFRGFRVW+DERDVSMD AY+KE
Sbjct: 111 LNNSVIRLPGTEDRIVVYFTSLRGIRRTYEDCYAVRMIFRGFRVWIDERDVSMDIAYRKE 170

Query: 177 LQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVR 236
           LQ   G K+V+LPQVFI GK+VG ADV+KS++E GELA++L  FP RQPGFVC  CGD+R
Sbjct: 171 LQIAMGEKSVSLPQVFIMGKYVGGADVIKSLFEIGELAKILKEFPMRQPGFVCHCCGDIR 230

Query: 237 FVPCGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDCCS 276
           FVPC NCSGS+K+FDE +   KRC +CNENGLIRCP C S
Sbjct: 231 FVPCSNCSGSKKLFDEDEDRLKRCPDCNENGLIRCPHCSS 270

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15240723|ref|NP_196885.1| Glutaredoxin family protein [Arabidopsis thaliana] gi|10177647|dbj|BAB11109.1| unnamed protein product [Arabidopsis thaliana] gi|14532460|gb|AAK63958.1| AT5g13810/MAC12_24 [Arabidopsis thaliana] gi|16974533|gb|AAL31176.1| AT5g13810/MAC12_24 [Arabidopsis thaliana] gi|21618248|gb|AAM67298.1| unknown [Arabidopsis thaliana] gi|332004561|gb|AED91944.1| Glutaredoxin family protein [Arabidopsis thaliana]

 Score =  303 bits (776), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 167/281 (59%), Positives = 194/281 (69%), Gaps = 12/281 (4%)

Query: 1   MAESEKNLEISSKASSSSSSM-LLNRSFTMHATAADSSLPK---LNYASLNRAASSNKFY 56
           MA  EKN + S K + S+++    NRS T+H      S PK   LN  SLNR  S  KFY
Sbjct: 1   MAGLEKNADFSGKTTKSATTTSFFNRSLTIHGRTVVDSGPKSHNLN-PSLNRTTSITKFY 59

Query: 57  NSMESVLAASNSFKGKVKQLRNLFEPKKSSKKINLNEPESPQQHHLIKLTKPVKSLS-LC 115
             +ES+     S KGKVK L  LFE   +SK +     E PQ+    K   P   +S   
Sbjct: 60  TPVESM---GTSLKGKVKNLCRLFE---TSKPVKPALAEIPQKQKSGKSLLPESRISPFS 113

Query: 116 YNNESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKK 175
             N S IRLPGTEDRIVVY TSLRGIRRT+EDCYAVRMIFRGFRVW+DERDVSMD AY+K
Sbjct: 114 SLNNSVIRLPGTEDRIVVYFTSLRGIRRTYEDCYAVRMIFRGFRVWIDERDVSMDIAYRK 173

Query: 176 ELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDV 235
           ELQ   G K+V+LPQVFI GK+VG ADV+KS++E GELA++L  FP RQPGFVC  CGD+
Sbjct: 174 ELQIAMGEKSVSLPQVFIMGKYVGGADVIKSLFEIGELAKILKEFPMRQPGFVCHCCGDI 233

Query: 236 RFVPCGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDCCS 276
           RFVPC NCSGS+K+FDE +   KRC ECNENGLIRCPDC S
Sbjct: 234 RFVPCSNCSGSKKLFDEDEDRVKRCPECNENGLIRCPDCSS 274

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357456689|ref|XP_003598625.1| hypothetical protein MTR_3g017490 [Medicago truncatula] gi|355487673|gb|AES68876.1| hypothetical protein MTR_3g017490 [Medicago truncatula]

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 146/268 (54%), Positives = 188/268 (70%), Gaps = 25/268 (9%)

Query: 22  LLNRSFTMHATAADSSLPKLNYASLNRAASSNKFYNSMESVLAASNSFKGK-VKQLRNLF 80
             NRS TMH ++ + S    N   L+R+ S +KFY SMES+    +S +G+ VK++  LF
Sbjct: 6   FFNRSNTMHTSSKEQSQKPFN-EFLDRSGSLSKFYGSMESM---KSSLRGRMVKKICTLF 61

Query: 81  EPKKSSKKINLN----------EPESPQQHHLIKLTKPVKSLSLCYNNESSI--RLPGTE 128
           E   ++    L+          EP +  +      + P K       +E+ +  RL   +
Sbjct: 62  ESPTTTTTKELSSSSSNLKPSSEPRAASKLGQKPRSGPEK-------DEAGMLFRLADAD 114

Query: 129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTL 188
           DRIVVYLTSLRGIRRTFEDC AV+MI +GFRVWVDERDVSMD A++KELQ V G +NVTL
Sbjct: 115 DRIVVYLTSLRGIRRTFEDCNAVKMILKGFRVWVDERDVSMDRAFRKELQSVMGEENVTL 174

Query: 189 PQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSGSRK 248
           PQVF+RGK++G ADV+KS++ETGEL R+L+GFPR +PGFVC SCGD RF+PC NCSGSRK
Sbjct: 175 PQVFVRGKYIGGADVIKSLFETGELKRILEGFPRMKPGFVCESCGDARFIPCENCSGSRK 234

Query: 249 VFDEADGVPKRCLECNENGLIRCPDCCS 276
           +FDE +G+ KRCLECNENGL+RCP CC+
Sbjct: 235 LFDEDEGLSKRCLECNENGLVRCP-CCA 261

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	277
TAIR|locus:2159038	274	AT5G13810 [Arabidopsis thalian	0.967	0.978	0.588	5.5e-77
TAIR|locus:2080635	417	AT3G57070 [Arabidopsis thalian	0.805	0.534	0.460	1.6e-47
TAIR|locus:2040267	402	AT2G41330 [Arabidopsis thalian	0.689	0.475	0.5	2.8e-43
TAIR|locus:2171223	273	AT5G58530 [Arabidopsis thalian	0.657	0.666	0.417	3.1e-35
TAIR|locus:2150640	384	AT5G03870 [Arabidopsis thalian	0.689	0.497	0.397	3.2e-33
TAIR|locus:2035589	314	AT1G32760 [Arabidopsis thalian	0.657	0.579	0.42	4.1e-33
TAIR|locus:2164285	239	AT5G06470 [Arabidopsis thalian	0.530	0.615	0.433	4.9e-30
TAIR|locus:2139252	334	AT4G10630 [Arabidopsis thalian	0.671	0.556	0.378	2.1e-29
TAIR|locus:504954828	390	AT5G39865 [Arabidopsis thalian	0.519	0.369	0.420	3.9e-28
TAIR|locus:2019479	368	AT1G64500 [Arabidopsis thalian	0.541	0.407	0.436	8.2e-28

TAIR|locus:2159038 AT5G13810 [Arabidopsis thaliana (taxid:3702)]

 Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
 Identities = 166/282 (58%), Positives = 190/282 (67%)

Query:     1 MAESEKNLEIXXXXX-XXXXXMLLNRSFTMHA-TAADSSLPK---LNYASLNRAASSNKF 55
             MA  EKN +               NRS T+H  T  DS  PK   LN  SLNR  S  KF
Sbjct:     1 MAGLEKNADFSGKTTKSATTTSFFNRSLTIHGRTVVDSG-PKSHNLN-PSLNRTTSITKF 58

Query:    56 YNSMESVLAASNSFKGKVKQLRNLFEPKKSSKKINLNEPESPQQHHLIKLTKPVKSLSLC 115
             Y  +ES+     S KGKVK L  LFE   +SK +     E PQ+    K   P   +S  
Sbjct:    59 YTPVESM---GTSLKGKVKNLCRLFE---TSKPVKPALAEIPQKQKSGKSLLPESRISPF 112

Query:   116 YN-NESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYK 174
              + N S IRLPGTEDRIVVY TSLRGIRRT+EDCYAVRMIFRGFRVW+DERDVSMD AY+
Sbjct:   113 SSLNNSVIRLPGTEDRIVVYFTSLRGIRRTYEDCYAVRMIFRGFRVWIDERDVSMDIAYR 172

Query:   175 KELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGD 234
             KELQ   G K+V+LPQVFI GK+VG ADV+KS++E GELA++L  FP RQPGFVC  CGD
Sbjct:   173 KELQIAMGEKSVSLPQVFIMGKYVGGADVIKSLFEIGELAKILKEFPMRQPGFVCHCCGD 232

Query:   235 VRFVPCGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDCCS 276
             +RFVPC NCSGS+K+FDE +   KRC ECNENGLIRCPDC S
Sbjct:   233 IRFVPCSNCSGSKKLFDEDEDRVKRCPECNENGLIRCPDCSS 274

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

TAIR|locus:2080635 AT3G57070 [Arabidopsis thaliana (taxid:3702)]

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 106/230 (46%), Positives = 141/230 (61%)

Query:    51 SSNKFYNSMESVLAAS--NSFKGKV-KQLRNLFEPKKSSKKINLNEPESPQQHHLIKLTK 107
             S   F + ++  + +S   +   K+     N   P + +K ++ + P S     + +  K
Sbjct:   189 SEESFLSDLDPSIVSSYKKALSSKLLSNHSNTRNPHRPTKSLSCS-PSSNPSILISEEPK 247

Query:   108 PVKSLSLCYNNESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDV 167
              V S  L  ++ +  RLPGTED+IV+Y T+LRGIR+T+EDC  VR I RG +V VDERD+
Sbjct:   248 SVSSSQLI-SSPAKPRLPGTEDKIVLYFTTLRGIRKTYEDCCCVRAILRGVQVSVDERDI 306

Query:   168 SMDSAYKKELQCVFGG--KNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQP 225
             SMDS Y+KELQ V G   K V LPQVFIRG H+G  + +  + + GELA +L  FP  + 
Sbjct:   307 SMDSKYRKELQSVLGAAEKPVCLPQVFIRGTHIGGVEEIMQLNDGGELAEMLKDFPACER 366

Query:   226 GFVCGSCGDVRFVPCGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDCC 275
                C SCGD RFVPC NC GS KVF+E D   KRC +CNENGL+RC  CC
Sbjct:   367 LGTCRSCGDARFVPCTNCDGSTKVFEEQDERFKRCPKCNENGLVRCRVCC 416

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2040267 AT2G41330 [Arabidopsis thaliana (taxid:3702)]

 Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
 Identities = 100/200 (50%), Positives = 123/200 (61%)

Query:    85 SSKKINLNEPESPQQHH-LIKLTKPVKSLSLCYN----NESSIRLPGTED---RIVVYLT 136
             SSK++  N       H  L+ L + V S  L       ++   RL   ED   +IVVY T
Sbjct:   202 SSKQLGKNSSNGHSNHSVLVSLPEYVSSSPLSSQTSEKDQEKPRLLEKEDNENKIVVYFT 261

Query:   137 SLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGG-KNVTLPQVFIRG 195
             SLRGIR+T+EDC  VR I RGF+V V+ERD+SMDS Y+KELQ   G  K V LPQVFIRG
Sbjct:   262 SLRGIRKTYEDCCCVRAILRGFQVAVEERDISMDSKYRKELQNALGEEKPVCLPQVFIRG 321

Query:   196 KHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSGSRKVFDEADG 255
               +G  + +K + + GELA +L  FP  +    C SCGD RFVPC NC GS KVF+E + 
Sbjct:   322 VRIGGIEEIKILNDGGELAEMLKDFPACESIGACDSCGDARFVPCTNCGGSTKVFEEQED 381

Query:   256 VPKRCLECNENGLIRCPDCC 275
               KRC  CNENGL+RC  CC
Sbjct:   382 GFKRCNGCNENGLVRCNKCC 401

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2171223 AT5G58530 [Arabidopsis thaliana (taxid:3702)]

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 84/201 (41%), Positives = 116/201 (57%)

Query:    83 KKSSKKINLNEPESPQQHHLIKLTKPVKSLSLCYNNESSIRLPGTEDRIVVYLTSLRGIR 142
             +  S+ INL+  ++P+       TK    +         I +PG E  IVVY TSLR +R
Sbjct:    75 RADSEPINLSRNQNPESDSKQSKTKTEPDVR--------ISIPGAEKSIVVYFTSLRVVR 126

Query:   143 RTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG---------GKNVTLPQVFI 193
              TFE C +V  I   F V +DERD+SMD+++  ELQ +FG          K   LP+VFI
Sbjct:   127 PTFEACKSVTSILHSFPVRIDERDLSMDASFSTELQRIFGKDQNQNQNQAKTPKLPRVFI 186

Query:   194 RGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSGSRKVFDEA 253
              G+++G A+ +K ++E GEL +++   P+ +PG VC  CG  RFVPC +C GS KV  E 
Sbjct:   187 GGRYIGGAEEVKQLHEIGELKKLVQELPKIEPG-VCEMCGGHRFVPCKDCHGSHKVHTEK 245

Query:   254 DGVPKRCLECNENGLIRCPDC 274
              G  + CL CNENGL+RC  C
Sbjct:   246 LGF-RTCLTCNENGLVRCSSC 265

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2150640 AT5G03870 [Arabidopsis thaliana (taxid:3702)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 78/196 (39%), Positives = 114/196 (58%)

Query:    80 FEPKKSSKKINLNEPESPQQHHLIKLTKPVKSLSLCYNNESSIRLPGTEDRIVVYLTSLR 139
             +E + S +K  +    SP  H   K  K  + L   +  +     PG E  +V+Y+T+LR
Sbjct:   192 YERELSQEKEQIKMVISPVVHESRKTEKTERILEK-FPEKCP---PGGEHSVVIYITTLR 247

Query:   140 GIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVG 199
             GIR+TFEDC  VR I     V   ERDVSM S +K+E++ + G K+V +P VF++G+ VG
Sbjct:   248 GIRKTFEDCNVVRSILDSHEVRFSERDVSMHSVFKEEIRGIMGTKHVKIPAVFVKGRMVG 307

Query:   200 NADVLKSMYETGELARVLDGFPR-RQPGFVCGSCGDVRFVPCGNCSGSRKVFDEADGVPK 258
             + + +  + E G+L  +L+G P  R  G  C  CG +RF+ C  C+GS KV +E      
Sbjct:   308 SVEEVMRLEEEGKLGILLEGIPAARLGGSCCRGCGGMRFMMCVVCNGSCKVREEEKKSMV 367

Query:   259 RCLECNENGLIRCPDC 274
             +CL+CNENGL+ CP C
Sbjct:   368 KCLKCNENGLVLCPIC 383

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2035589 AT1G32760 [Arabidopsis thaliana (taxid:3702)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 84/200 (42%), Positives = 118/200 (59%)

Query:    83 KKSSKKINLNEPESPQQHHLIKLTKPVKSLSLCYNNESSIRL-PGTEDRIVVYLTSLRGI 141
             KK +   NL   ++P  + ++K   P   L+     E S RL  G E+R+V+Y TSLRG+
Sbjct:   124 KKENSDPNL---KNPNDYEVLKPLDP--KLA-----EESERLCDGGENRVVIYTTSLRGV 173

Query:   142 RRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKN---VTLPQVFIRGKHV 198
             RRTFE C AVR     F V V ERDVSMD  +++EL  +   ++   V  P+VF++GK++
Sbjct:   174 RRTFEACNAVRAAIESFGVVVCERDVSMDRGFREELSNLMAVESTAAVLPPRVFVKGKYI 233

Query:   199 GNADVLKSMYETGELARVLDGFPRRQP--GFVCGSCGDVRFVPCGNCSGSRKVFDE--AD 254
             G A+ +  + E G L  +L   PR++   G  CG CG + F+PC  C+GS KV +    D
Sbjct:   234 GGAEEVMRLVEEGLLGELLKEIPRKKDRCGGGCGGCGGLAFLPCSGCNGSCKVVEGWGND 293

Query:   255 GVPKRCLECNENGLIRCPDC 274
              V  +C ECNENGL+RCP C
Sbjct:   294 AVVVKCKECNENGLVRCPIC 313

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2164285 AT5G06470 [Arabidopsis thaliana (taxid:3702)]

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 68/157 (43%), Positives = 99/157 (63%)

Query:   125 PGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGK 184
             PG ED +V Y T LR +R+TFE C  VR +    +V   ERDVSMDS +++E+  + GGK
Sbjct:    85 PGGEDSVVFYTTGLRSVRKTFEACRRVRFLLENHQVMYRERDVSMDSEFREEMWRLLGGK 144

Query:   185 NVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCS 244
              VT P++FIRG+++G A+ + ++ E G+L ++L G    Q    C SC + RF+ C +C+
Sbjct:   145 -VTSPRLFIRGRYIGGAEEVVALNENGKLKKLLQGIS--QVDSPCESCENERFLICSSCN 201

Query:   245 GSRKVF----DEA---DGVPKRCLECNENGLIRCPDC 274
             GS ++     DE    D +  RC ECNENGL++CP C
Sbjct:   202 GSTRLLAEHHDEESSNDNMWTRCRECNENGLVKCPLC 238

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

TAIR|locus:2139252 AT4G10630 [Arabidopsis thaliana (taxid:3702)]

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 76/201 (37%), Positives = 111/201 (55%)

Query:    87 KKINLNEPESPQQHHLIKLTKPVKSLSLCYNNE-SSIRLPGTEDRIVVYLTSLRGIRRTF 145
             K ++LN  +S       +  K  K L L  + +   I  PG E+R+V+Y TSLRG+R+TF
Sbjct:   135 KPLDLNREDSDSNSRSPR--KSFKPLDLKLDEKFERICPPGGENRVVMYTTSLRGVRQTF 192

Query:   146 EDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVF----GGKNVTL--PQVFIRGKHVG 199
             E C AVR     F V V ERDVSMD  +++EL  +     G + V    P+VF++G+++G
Sbjct:   193 EACNAVRAAVESFGVVVCERDVSMDRRFREELVSLMAKRVGDEGVAALPPRVFVKGRYIG 252

Query:   200 NADVLKSMYETGELARVLDGFPRRQPGF----VCGSCGDVRFVPCGNCSGSRKVFDE--A 253
               + +  + E G    ++ G PR++ G      C  CG + F+PC  C+GS K+     +
Sbjct:   253 GGEEVLRLVEEGSFGELISGIPRKKAGGCESGACDGCGGLFFLPCFRCNGSCKMVKGWGS 312

Query:   254 DGVPKRCLECNENGLIRCPDC 274
               V  RC ECNENGL+ CP C
Sbjct:   313 ASVVVRCNECNENGLVPCPIC 333

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

TAIR|locus:504954828 AT5G39865 [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 66/157 (42%), Positives = 97/157 (61%)

Query:   128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGK--- 184
             ++R+V+Y TSLRGIR+T+EDC  +R+I +   + +DERDVSM S +K EL+ +  GK   
Sbjct:   224 KERVVLYFTSLRGIRKTYEDCCNIRIILKSLGIRIDERDVSMHSGFKDELKKLLEGKFNN 283

Query:   185 --NVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQ---PGF--VCGSCGDVRF 237
                +TLP+VF+  K++G  + +K + E GEL +++      +   PGF   C +CGDVRF
Sbjct:   284 GVGITLPRVFLGNKYLGGVEEIKKLNENGELEKLIKDCEMVEDGSPGFGNECEACGDVRF 343

Query:   238 VPCGNCSGSRKVFDEADGVPKRCLECNENGLIRCPDC 274
             VPC  CSGS K++ E +   +      E G  RCP C
Sbjct:   344 VPCETCSGSCKLYHEGEEEDEGV---TEYGFQRCPYC 377

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2019479 AT1G64500 [Arabidopsis thaliana (taxid:3702)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 69/158 (43%), Positives = 96/158 (60%)

Query:   125 PGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGK 184
             PG  + ++VY TSL+G+RRT+EDC  VR I     V VDERDVS+D+    EL+ +   +
Sbjct:   208 PGGGEGLIVYTTSLQGVRRTYEDCMRVRAIMEQQGVVVDERDVSLDAGVLSELKELLQDE 267

Query:   185 -NVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPG----FVCGSCGDVRFVP 239
              +V  P+VF++G+++G A  + +M E G+L RVL      + G      C  CG  R++P
Sbjct:   268 ASVAPPRVFVKGRYLGGAAEVTAMNENGKLGRVLRWARVERVGEEGRLTCEGCGGARWLP 327

Query:   240 CGNCSGSRKV--FDEADGVP-KRCLECNENGLIRCPDC 274
             C  C GS KV     A G   +RC++CNENGLIRCP C
Sbjct:   328 CFECGGSCKVAAVGAAKGERWERCVKCNENGLIRCPVC 365

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0005884 "actin filament" evidence=IDA

GO:0009902 "chloroplast relocation" evidence=IMP

GO:0051017 "actin filament bundle assembly" evidence=IDA

GO:0048653 "anther development" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	277
cd03031	147	cd03031, GRX_GRX_like, Glutaredoxin (GRX) family,	1e-73
cd02066	72	cd02066, GRX_family, Glutaredoxin (GRX) family; co	9e-18
pfam00462	60	pfam00462, Glutaredoxin, Glutaredoxin	4e-11
cd03028	90	cd03028, GRX_PICOT_like, Glutaredoxin (GRX) family	2e-06
COG0278	105	COG0278, COG0278, Glutaredoxin-related protein [Po	5e-06
TIGR00365	97	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4	2e-05
cd03419	82	cd03419, GRX_GRXh_1_2_like, Glutaredoxin (GRX) fam	5e-05
TIGR02180	84	TIGR02180, GRX_euk, Glutaredoxin	9e-05
COG0695	80	COG0695, GrxC, Glutaredoxin and related proteins [	3e-04
cd03418	75	cd03418, GRX_GRXb_1_3_like, Glutaredoxin (GRX) fam	6e-04
cd03027	73	cd03027, GRX_DEP, Glutaredoxin (GRX) family, Dishe	0.001
PTZ00062	204	PTZ00062, PTZ00062, glutaredoxin; Provisional	0.002

>gnl|CDD|239329 cd03031, GRX_GRX_like, Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

 Score =  221 bits (565), Expect = 1e-73
 Identities = 78/147 (53%), Positives = 101/147 (68%), Gaps = 5/147 (3%)

Query: 130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGG--KNVT 187
           R+V+Y TSLRG+R+TFEDC  VR I   FRV  DERDVSMDS +++EL+ + G   K V+
Sbjct: 1   RVVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSMDSGFREELRELLGAELKAVS 60

Query: 188 LPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSGSR 247
           LP+VF+ G+++G A+ +  + E+GEL ++L G   R  G VC  CG  RFVPC  C+GS 
Sbjct: 61  LPRVFVDGRYLGGAEEVLRLNESGELRKLLKGIRARAGGGVCEGCGGARFVPCSECNGSC 120

Query: 248 KVFDE---ADGVPKRCLECNENGLIRC 271
           KVF E   A G   RC ECNENGL+RC
Sbjct: 121 KVFAENATAAGGFLRCPECNENGLVRC 147

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive. Length = 147

>gnl|CDD|239017 cd02066, GRX_family, Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

 Score = 75.2 bits (186), Expect = 9e-18
 Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 8/80 (10%)

Query: 130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLP 189
           ++VV+  S      T   C   + +     +  +E D+  D   ++EL+ + G    T+P
Sbjct: 1   KVVVFSKS------TCPYCKRAKRLLESLGIEFEEIDILEDGELREELKELSGW--PTVP 52

Query: 190 QVFIRGKHVGNADVLKSMYE 209
           Q+FI G+ +G  D LK+++E
Sbjct: 53  QIFINGEFIGGYDDLKALHE 72

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH -> GSH reductase -> GSH -> GRX -> protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which are members of this family. E. coli GRX2, however, is a 24-kDa protein that belongs to the GSH S-transferase (GST) family. Length = 72

>gnl|CDD|215931 pfam00462, Glutaredoxin, Glutaredoxin

 Score = 57.1 bits (139), Expect = 4e-11
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)

Query: 131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQ 190
           +V++       + T   C   + +     V  +E DV  D   ++EL+ + G    T+PQ
Sbjct: 1   VVLF------TKPTCPFCKRAKRLLDSLGVKFEEIDVDEDPEIREELKELSGW--PTVPQ 52

Query: 191 VFIRGKHV 198
           VFI G+H+
Sbjct: 53  VFIDGEHI 60

Length = 60

>gnl|CDD|239326 cd03028, GRX_PICOT_like, Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 13/28 (46%), Positives = 21/28 (75%)

Query: 187 TLPQVFIRGKHVGNADVLKSMYETGELA 214
           T PQ+++ G+ VG  D++K M+E+GEL 
Sbjct: 63  TFPQLYVNGELVGGCDIVKEMHESGELQ 90

The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein in Arabidopsis thaliana, and PfGLP-1, a GRX-like protein from Plasmodium falciparum. Length = 90

>gnl|CDD|223355 COG0278, COG0278, Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

 Score = 44.2 bits (105), Expect = 5e-06
 Identities = 13/31 (41%), Positives = 23/31 (74%)

Query: 187 TLPQVFIRGKHVGNADVLKSMYETGELARVL 217
           T PQ+++ G+ VG  D+++ MY++GEL  +L
Sbjct: 71  TFPQLYVNGEFVGGCDIVREMYQSGELQTLL 101

Length = 105

>gnl|CDD|188046 TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 13/31 (41%), Positives = 24/31 (77%)

Query: 187 TLPQVFIRGKHVGNADVLKSMYETGELARVL 217
           T+PQ++++G+ VG  D++  MY++GEL  +L
Sbjct: 67  TIPQLYVKGEFVGGCDIIMEMYQSGELQTLL 97

The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation [Energy metabolism, Electron transport]. Length = 97

>gnl|CDD|239511 cd03419, GRX_GRXh_1_2_like, Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

 Score = 40.6 bits (96), Expect = 5e-05
 Identities = 12/28 (42%), Positives = 20/28 (71%)

Query: 187 TLPQVFIRGKHVGNADVLKSMYETGELA 214
           T+P VFI GK +G  D L +++++G+L 
Sbjct: 53  TVPNVFIGGKFIGGCDDLMALHKSGKLV 80

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH -> GSH reductase -> GSH -> GRX -> protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, which are members of this subfamily. Also included in this subfamily are the N-terminal GRX domains of proteins similar to human thioredoxin reductase 1 and 3. Length = 82

>gnl|CDD|233765 TIGR02180, GRX_euk, Glutaredoxin

 Score = 39.9 bits (94), Expect = 9e-05
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 7/75 (9%)

Query: 148 CYAVRMIFRGFRV-----WVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNAD 202
           C   + I     V      V+   +S  S  +  L+ + G +  T+P +FI GK +G   
Sbjct: 12  CKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQR--TVPNIFINGKFIGGCS 69

Query: 203 VLKSMYETGELARVL 217
            L ++Y++G+LA +L
Sbjct: 70  DLLALYKSGKLAELL 84

Glutaredoxins are thioltransferases (disulfide reductases) which utilize glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system. Glutaredoxins utilize the CXXC motif common to thioredoxins and are involved in multiple cellular processes including protection from redox stress, reduction of critical enzymes such as ribonucleotide reductase and the generation of reduced sulfur for iron sulfur cluster formation. Glutaredoxins are capable of reduction of mixed disulfides of glutathione as well as the formation of glutathione mixed disulfides. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses. Length = 84

>gnl|CDD|223767 COG0695, GrxC, Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 19/52 (36%), Positives = 26/52 (50%)

Query: 163 DERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELA 214
           +E DV  D   +       G    T+PQ+FI GKHVG  D L ++   G+L 
Sbjct: 29  EEIDVDDDEPEEAREMVKRGKGQRTVPQIFIGGKHVGGCDDLDALEAKGKLD 80

Length = 80

>gnl|CDD|239510 cd03418, GRX_GRXb_1_3_like, Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

 Score = 37.2 bits (87), Expect = 6e-04
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 163 DERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETG 211
           +E DV  D A ++E+    GG+  T+PQ+FI   H+G  D L ++   G
Sbjct: 28  EEIDVDGDPALREEMINRSGGR-RTVPQIFIGDVHIGGCDDLYALERKG 75

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH -> GSH reductase -> GSH -> GRX -> protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including E. coli GRX1 and GRX3, which are members of this subfamily. Length = 75

>gnl|CDD|239325 cd03027, GRX_DEP, Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions

 Score = 36.6 bits (85), Expect = 0.001
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 8/80 (10%)

Query: 130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLP 189
           R+ +Y       R   EDC AVR+  R   +   E ++ +    K EL+   G     +P
Sbjct: 2   RVTIY------SRLGCEDCTAVRLFLREKGLPYVEINIDIFPERKAELEERTGSS--VVP 53

Query: 190 QVFIRGKHVGNADVLKSMYE 209
           Q+F   K VG    LKS+ E
Sbjct: 54  QIFFNEKLVGGLTDLKSLEE 73

GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions. Length = 73

>gnl|CDD|240250 PTZ00062, PTZ00062, glutaredoxin; Provisional

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 11/31 (35%), Positives = 22/31 (70%)

Query: 187 TLPQVFIRGKHVGNADVLKSMYETGELARVL 217
           T PQ+++ G+ +G  D++K +YE+  L +V+
Sbjct: 168 TYPQLYVNGELIGGHDIIKELYESNSLRKVI 198

Length = 204

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	277
KOG2824	281	consensus Glutaredoxin-related protein [Posttransl	100.0
cd03031	147	GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d	100.0
cd03030	92	GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3	99.91
TIGR00365	97	monothiol glutaredoxin, Grx4 family. The gene for	99.88
PRK10824	115	glutaredoxin-4; Provisional	99.87
TIGR02189	99	GlrX-like_plant Glutaredoxin-like family. This fam	99.86
cd03028	90	GRX_PICOT_like Glutaredoxin (GRX) family, PKC-inte	99.85
PHA03050	108	glutaredoxin; Provisional	99.85
TIGR02181	79	GRX_bact Glutaredoxin, GrxC family. This family of	99.81
PRK10638	83	glutaredoxin 3; Provisional	99.81
PTZ00062	204	glutaredoxin; Provisional	99.79
KOG1752	104	consensus Glutaredoxin and related proteins [Postt	99.78
cd03418	75	GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX b	99.76
cd03027	73	GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Eg	99.76
TIGR02180	84	GRX_euk Glutaredoxin. This model represents eukary	99.7
COG0278	105	Glutaredoxin-related protein [Posttranslational mo	99.7
cd03419	82	GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX h	99.68
COG0695	80	GrxC Glutaredoxin and related proteins [Posttransl	99.67
cd03029	72	GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hyb	99.66
cd02066	72	GRX_family Glutaredoxin (GRX) family; composed of	99.66
PF04908	99	SH3BGR: SH3-binding, glutamic acid-rich protein; I	99.64
TIGR02190	79	GlrX-dom Glutaredoxin-family domain. This C-termin	99.64
PRK11200	85	grxA glutaredoxin 1; Provisional	99.64
TIGR02183	86	GRXA Glutaredoxin, GrxA family. This model include	99.64
KOG0911	227	consensus Glutaredoxin-related protein [Posttransl	99.57
PF00462	60	Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Gl	99.54
PRK12759	410	bifunctional gluaredoxin/ribonucleoside-diphosphat	99.5
TIGR02194	72	GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-red	99.35
PRK10329	81	glutaredoxin-like protein; Provisional	99.35
TIGR02196	74	GlrX_YruB Glutaredoxin-like protein, YruB-family.	99.13
cd02976	73	NrdH NrdH-redoxin (NrdH) family; NrdH is a small m	99.03
TIGR02200	77	GlrX_actino Glutaredoxin-like protein. This family	98.81
KOG4023	108	consensus Uncharacterized conserved protein [Funct	98.64
cd02973	67	TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-	98.61
cd03041	77	GST_N_2GST_N GST_N family, 2 repeats of the N-term	98.48
cd03040	77	GST_N_mPGES2 GST_N family; microsomal Prostaglandi	98.32
cd00570	71	GST_N_family Glutathione S-transferase (GST) famil	98.3
cd03037	71	GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) sub	98.26
cd03055	89	GST_N_Omega GST_N family, Class Omega subfamily; G	98.05
cd03059	73	GST_N_SspA GST_N family, Stringent starvation prot	97.98
cd03036	111	ArsC_like Arsenate Reductase (ArsC) family, unknow	97.92
cd02977	105	ArsC_family Arsenate Reductase (ArsC) family; comp	97.83
cd03051	74	GST_N_GTT2_like GST_N family, Saccharomyces cerevi	97.83
cd03060	71	GST_N_Omega_like GST_N family, Omega-like subfamil	97.81
PF13417	75	GST_N_3: Glutathione S-transferase, N-terminal dom	97.8
TIGR00411	82	redox_disulf_1 small redox-active disulfide protei	97.79
PRK01655	131	spxA transcriptional regulator Spx; Reviewed	97.72
cd03045	74	GST_N_Delta_Epsilon GST_N family, Class Delta and	97.71
PF05768	81	DUF836: Glutaredoxin-like domain (DUF836); InterPr	97.66
cd03056	73	GST_N_4 GST_N family, unknown subfamily 4; compose	97.65
cd03054	72	GST_N_Metaxin GST_N family, Metaxin subfamily; com	97.51
TIGR01617	117	arsC_related transcriptional regulator, Spx/MgsR f	97.51
cd03032	115	ArsC_Spx Arsenate Reductase (ArsC) family, Spx sub	97.46
PRK13344	132	spxA transcriptional regulator Spx; Reviewed	97.4
PRK12559	131	transcriptional regulator Spx; Provisional	97.38
cd03035	105	ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb s	97.34
PHA02125	75	thioredoxin-like protein	97.26
cd03053	76	GST_N_Phi GST_N family, Class Phi subfamily; compo	97.23
cd03026	89	AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxid	97.21
cd03061	91	GST_N_CLIC GST_N family, Chloride Intracellular Ch	97.16
cd03033	113	ArsC_15kD Arsenate Reductase (ArsC) family, 15kD p	97.15
cd03058	74	GST_N_Tau GST_N family, Class Tau subfamily; GSTs	97.11
cd03042	73	GST_N_Zeta GST_N family, Class Zeta subfamily; GST	97.08
cd03052	73	GST_N_GDAP1 GST_N family, Ganglioside-induced diff	97.08
cd03076	73	GST_N_Pi GST_N family, Class Pi subfamily; GSTs ar	97.04
KOG3029	370	consensus Glutathione S-transferase-related protei	97.01
cd03039	72	GST_N_Sigma_like GST_N family, Class Sigma_like; c	96.89
TIGR00412	76	redox_disulf_2 small redox-active disulfide protei	96.79
cd03049	73	GST_N_3 GST_N family, unknown subfamily 3; compose	96.77
cd03048	81	GST_N_Ure2p_like GST_N family, Ure2p-like subfamil	96.75
cd03080	75	GST_N_Metaxin_like GST_N family, Metaxin subfamily	96.71
PLN03165	111	chaperone protein dnaJ-related; Provisional	96.67
PRK10387	210	glutaredoxin 2; Provisional	96.66
cd03038	84	GST_N_etherase_LigE GST_N family, Beta etherase Li	96.63
PF13192	76	Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZY	96.59
COG1393	117	ArsC Arsenate reductase and related proteins, glut	96.58
TIGR02182	209	GRXB Glutaredoxin, GrxB family. This model include	96.54
cd02975	113	PfPDO_like_N Pyrococcus furiosus protein disulfide	96.53
cd03034	112	ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC s	96.27
cd03050	76	GST_N_Theta GST_N family, Class Theta subfamily; c	96.27
TIGR00014	114	arsC arsenate reductase (glutaredoxin). composed o	96.23
PRK10853	118	putative reductase; Provisional	96.15
PRK10026	141	arsenate reductase; Provisional	96.13
cd03043	73	GST_N_1 GST_N family, unknown subfamily 1; compose	96.11
TIGR01616	126	nitro_assoc nitrogenase-associated protein. This m	96.08
cd03046	76	GST_N_GTT1_like GST_N family, Saccharomyces cerevi	96.02
cd01659	69	TRX_superfamily Thioredoxin (TRX) superfamily; a l	95.98
cd03044	75	GST_N_EF1Bgamma GST_N family, Gamma subunit of Elo	95.92
cd03057	77	GST_N_Beta GST_N family, Class Beta subfamily; GST	95.88
PF13409	70	GST_N_2: Glutathione S-transferase, N-terminal dom	95.88
TIGR00862	236	O-ClC intracellular chloride channel protein. Thes	95.87
cd03047	73	GST_N_2 GST_N family, unknown subfamily 2; compose	95.79
cd02947	93	TRX_family TRX family; composed of two groups: Gro	95.68
TIGR01295	122	PedC_BrcD bacteriocin transport accessory protein,	95.67
PRK09481	211	sspA stringent starvation protein A; Provisional	95.66
COG4545	85	Glutaredoxin-related protein [Posttranslational mo	95.64
TIGR03140	515	AhpF alkyl hydroperoxide reductase, F subunit. Thi	95.61
PRK15317	517	alkyl hydroperoxide reductase subunit F; Provision	95.55
cd02953	104	DsbDgamma DsbD gamma family; DsbD gamma is the C-t	95.4
cd02957	113	Phd_like Phosducin (Phd)-like family; composed of	94.99
TIGR02187	215	GlrX_arch Glutaredoxin-like domain protein. This f	94.92
PF03960	110	ArsC: ArsC family; InterPro: IPR006660 Several bac	94.88
cd02949	97	TRX_NTR TRX domain, novel NADPH thioredoxin reduct	94.69
PHA02278	103	thioredoxin-like protein	94.48
cd03077	79	GST_N_Alpha GST_N family, Class Alpha subfamily; G	94.45
PRK15113	214	glutathione S-transferase; Provisional	93.97
PLN02817	265	glutathione dehydrogenase (ascorbate)	93.83
PLN02378	213	glutathione S-transferase DHAR1	93.49
PLN02473	214	glutathione S-transferase	93.47
PF00085	103	Thioredoxin: Thioredoxin; InterPro: IPR013766 Thio	93.39
cd02989	113	Phd_like_TxnDC9 Phosducin (Phd)-like family, Thior	93.38
TIGR03143	555	AhpF_homolog putative alkyl hydroperoxide reductas	93.06
TIGR01262	210	maiA maleylacetoacetate isomerase. Maleylacetoacet	93.06
cd02954	114	DIM1 Dim1 family; Dim1 is also referred to as U5 s	93.02
TIGR01068	101	thioredoxin thioredoxin. Several proteins, such as	92.91
PF13098	112	Thioredoxin_2: Thioredoxin-like domain; PDB: 1T3B_	92.84
PTZ00051	98	thioredoxin; Provisional	92.54
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	92.37
KOG0910	150	consensus Thioredoxin-like protein [Posttranslatio	92.35
PRK11752	264	putative S-transferase; Provisional	92.31
TIGR02187	215	GlrX_arch Glutaredoxin-like domain protein. This f	92.14
cd02951	125	SoxW SoxW family; SoxW is a bacterial periplasmic	92.07
cd02965	111	HyaE HyaE family; HyaE is also called HupG and Hox	91.98
PLN02395	215	glutathione S-transferase	91.79
PRK09381	109	trxA thioredoxin; Provisional	91.74
cd02985	103	TRX_CDSP32 TRX family, chloroplastic drought-induc	91.72
KOG1422	221	consensus Intracellular Cl- channel CLIC, contains	91.62
cd03079	74	GST_N_Metaxin2 GST_N family, Metaxin subfamily, Me	91.52
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	91.22
PRK10996	139	thioredoxin 2; Provisional	91.06
PTZ00057	205	glutathione s-transferase; Provisional	91.05
cd02987	175	Phd_like_Phd Phosducin (Phd)-like family, Phd subf	90.93
PRK10767	371	chaperone protein DnaJ; Provisional	90.44
KOG0406	231	consensus Glutathione S-transferase [Posttranslati	90.42
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	90.42
KOG0907	106	consensus Thioredoxin [Posttranslational modificat	90.15
cd03065	120	PDI_b_Calsequestrin_N PDIb family, Calsequestrin s	89.92
cd02984	97	TRX_PICOT TRX domain, PICOT (for PKC-interacting c	89.82
cd03004	104	PDI_a_ERdj5_C PDIa family, C-terminal ERdj5 subfam	89.81
PRK14287	371	chaperone protein DnaJ; Provisional	89.77
PRK14290	365	chaperone protein DnaJ; Provisional	89.34
PRK14300	372	chaperone protein DnaJ; Provisional	89.3
PRK13972	215	GSH-dependent disulfide bond oxidoreductase; Provi	89.19
cd02950	142	TxlA TRX-like protein A (TxlA) family; TxlA was or	88.72
cd02962	152	TMX2 TMX2 family; composed of proteins similar to	88.62
cd03075	82	GST_N_Mu GST_N family, Class Mu subfamily; GSTs ar	88.56
COG0625	211	Gst Glutathione S-transferase [Posttranslational m	88.38
TIGR01126	102	pdi_dom protein disulfide-isomerase domain. This m	88.24
cd02996	108	PDI_a_ERp44 PDIa family, endoplasmic reticulum pro	88.09
cd02956	96	ybbN ybbN protein family; ybbN is a hypothetical p	87.96
KOG2813	406	consensus Predicted molecular chaperone, contains	87.92
PRK10357	202	putative glutathione S-transferase; Provisional	87.87
cd03078	73	GST_N_Metaxin1_like GST_N family, Metaxin subfamil	87.77
cd02961	101	PDI_a_family Protein Disulfide Isomerase (PDIa) fa	87.71
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	87.19
cd02994	101	PDI_a_TMX PDIa family, TMX subfamily; composed of	87.18
PRK14284	391	chaperone protein DnaJ; Provisional	87.05
COG3019	149	Predicted metal-binding protein [General function	87.02
PRK14286	372	chaperone protein DnaJ; Provisional	86.9
PRK14285	365	chaperone protein DnaJ; Provisional	86.84
PRK14298	377	chaperone protein DnaJ; Provisional	86.8
cd03003	101	PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfam	86.69
PRK14289	386	chaperone protein DnaJ; Provisional	86.66
PRK14282	369	chaperone protein DnaJ; Provisional	86.59
PF06953	123	ArsD: Arsenical resistance operon trans-acting rep	86.47
PRK14294	366	chaperone protein DnaJ; Provisional	86.47
cd02963	111	TRX_DnaJ TRX domain, DnaJ domain containing protei	86.0
PRK14296	372	chaperone protein DnaJ; Provisional	85.94
PRK14295	389	chaperone protein DnaJ; Provisional	85.77
cd02959	117	ERp19 Endoplasmic reticulum protein 19 (ERp19) fam	85.67
PRK14291	382	chaperone protein DnaJ; Provisional	85.61
PRK14301	373	chaperone protein DnaJ; Provisional	85.53
PRK14292	371	chaperone protein DnaJ; Provisional	85.32
PRK14296	372	chaperone protein DnaJ; Provisional	84.97
PRK14280	376	chaperone protein DnaJ; Provisional	84.78
PRK14288	369	chaperone protein DnaJ; Provisional	84.74
PRK10542	201	glutathionine S-transferase; Provisional	84.64
PRK14297	380	chaperone protein DnaJ; Provisional	84.35
PF07315	93	DUF1462: Protein of unknown function (DUF1462); In	84.29
cd03001	103	PDI_a_P5 PDIa family, P5 subfamily; composed of eu	84.28
COG0178	935	UvrA Excinuclease ATPase subunit [DNA replication,	84.26
PRK14293	374	chaperone protein DnaJ; Provisional	84.25
PRK14278	378	chaperone protein DnaJ; Provisional	84.08
PRK14276	380	chaperone protein DnaJ; Provisional	84.0
PLN00410	142	U5 snRNP protein, DIM1 family; Provisional	83.98
cd02948	102	TRX_NDPK TRX domain, TRX and NDP-kinase (NDPK) fus	83.84
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	83.74
PRK14288	369	chaperone protein DnaJ; Provisional	83.15
PRK14280	376	chaperone protein DnaJ; Provisional	83.03
PF02798	76	GST_N: Glutathione S-transferase, N-terminal domai	83.03
PRK14285	365	chaperone protein DnaJ; Provisional	82.98
PTZ00037	421	DnaJ_C chaperone protein; Provisional	82.86
cd03005	102	PDI_a_ERp46 PDIa family, endoplasmic reticulum pro	82.84
PRK14281	397	chaperone protein DnaJ; Provisional	82.75
PRK14282	369	chaperone protein DnaJ; Provisional	82.6
cd02999	100	PDI_a_ERp44_like PDIa family, endoplasmic reticulu	82.36
PRK14279	392	chaperone protein DnaJ; Provisional	82.35
PRK14284	391	chaperone protein DnaJ; Provisional	82.31
PRK14279	392	chaperone protein DnaJ; Provisional	82.23
PRK14277	386	chaperone protein DnaJ; Provisional	82.21
cd02998	105	PDI_a_ERp38 PDIa family, endoplasmic reticulum pro	82.06
KOG4244	281	consensus Failed axon connections (fax) protein/gl	82.05
PRK14301	373	chaperone protein DnaJ; Provisional	81.96
PF13901	202	DUF4206: Domain of unknown function (DUF4206)	81.84
PF10865	120	DUF2703: Domain of unknown function (DUF2703); Int	81.78
PRK14283	378	chaperone protein DnaJ; Provisional	81.77
PRK14286	372	chaperone protein DnaJ; Provisional	81.73
PTZ00037	421	DnaJ_C chaperone protein; Provisional	81.61
TIGR00595	505	priA primosomal protein N'. All proteins in this f	81.49
PRK14290	365	chaperone protein DnaJ; Provisional	81.26
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	81.16
PRK14276	380	chaperone protein DnaJ; Provisional	81.09
PRK14278	378	chaperone protein DnaJ; Provisional	81.06
PRK14277	386	chaperone protein DnaJ; Provisional	81.04
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	80.89
PRK14873	665	primosome assembly protein PriA; Provisional	80.44
PRK14289	386	chaperone protein DnaJ; Provisional	80.42
PRK10767	371	chaperone protein DnaJ; Provisional	80.38
PRK14297	380	chaperone protein DnaJ; Provisional	80.35
PRK14294	366	chaperone protein DnaJ; Provisional	80.04
PF14595	129	Thioredoxin_9: Thioredoxin; PDB: 1Z6N_A.	80.03

>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.2e-53  Score=392.85  Aligned_cols=156  Identities=56%  Similarity=1.045  Sum_probs=148.1

Q ss_pred             ccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCC--CCCCCcEEEeCCEE
Q 048504          120 SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGG--KNVTLPQVFIRGKH  197 (277)
Q Consensus       120 ~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~--~~~tvPqVFI~G~~  197 (277)
                      ....+|+++++||||+|+++|||+||++|..||+||++++|.|+||||+||..|++||++++|.  ...++|+|||+|+|
T Consensus       122 ~~~~~Pgge~~VVvY~TsLRgvRkTfE~C~~VR~ilesf~V~v~ERDVSMd~~fr~EL~~~lg~~~~~~~LPrVFV~Gry  201 (281)
T KOG2824|consen  122 KEVCPPGGEDRVVVYTTSLRGVRKTFEDCNAVRAILESFRVKVDERDVSMDSEFREELQELLGEDEKAVSLPRVFVKGRY  201 (281)
T ss_pred             hhcCCCCCCceEEEEEcccchhhhhHHHHHHHHHHHHhCceEEEEecccccHHHHHHHHHHHhcccccCccCeEEEccEE
Confidence            4567799999999999999999999999999999999999999999999999999999999997  67999999999999


Q ss_pred             EechhHHHHHHhhccHHHHhcCCCCCCCCCCCCCCCccceEeCCCCCCcceeee--CCCCcceeCCCCCcCceeeCCCCC
Q 048504          198 VGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSGSRKVFD--EADGVPKRCLECNENGLIRCPDCC  275 (277)
Q Consensus       198 IGG~del~~L~EsGeL~klL~~~~~~~~~~~C~~CGg~rfVpC~~C~GS~Kv~~--~~~~~~~rC~~CNEnGLvrCp~C~  275 (277)
                      |||++++++|||.|+|.+||+++| ..+...|++|||.||+||..||||+|++.  +++++++||++||||||||||.|+
T Consensus       202 IGgaeeV~~LnE~GkL~~lL~~~p-~~~~~~C~~CGg~rFlpC~~C~GS~kv~~~~~~~~~~~rC~~CNENGLvrCp~Cs  280 (281)
T KOG2824|consen  202 IGGAEEVVRLNEEGKLGKLLKGIP-CEGGGVCESCGGARFLPCSNCHGSCKVHEEEEDDGGVLRCLECNENGLVRCPVCS  280 (281)
T ss_pred             eccHHHhhhhhhcchHHHHHhcCC-CCCCCcCCCcCCcceEecCCCCCceeeeeeccCCCcEEECcccCCCCceeCCccC
Confidence            999999999999999999999999 45568999999999999999999999998  667789999999999999999997


Q ss_pred             C
Q 048504          276 S  276 (277)
Q Consensus       276 ~  276 (277)
                      .
T Consensus       281 ~  281 (281)
T KOG2824|consen  281 N  281 (281)
T ss_pred             C
Confidence            3

>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

Probab=100.00  E-value=2.5e-51  Score=349.57  Aligned_cols=142  Identities=54%  Similarity=1.003  Sum_probs=136.1

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCC--CCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGG--KNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~--~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +|||||||+++||+|||+|.+||+||++++|+|+|+||+||+++++||++++|.  ++.++|||||+|+||||+|++++|
T Consensus         1 ~VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~DVs~~~~~~~EL~~~~g~~~~~~tvPqVFI~G~~IGG~del~~L   80 (147)
T cd03031           1 RVVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSMDSGFREELRELLGAELKAVSLPRVFVDGRYLGGAEEVLRL   80 (147)
T ss_pred             CEEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCCCCCCCEEEECCEEEecHHHHHHH
Confidence            599999999999999999999999999999999999999999999999999975  358999999999999999999999


Q ss_pred             HhhccHHHHhcCCCCCCCCCCCCCCCccceEeCCCCCCcceeeeCC---CCcceeCCCCCcCceeeC
Q 048504          208 YETGELARVLDGFPRRQPGFVCGSCGDVRFVPCGNCSGSRKVFDEA---DGVPKRCLECNENGLIRC  271 (277)
Q Consensus       208 ~EsGeL~klL~~~~~~~~~~~C~~CGg~rfVpC~~C~GS~Kv~~~~---~~~~~rC~~CNEnGLvrC  271 (277)
                      ||+|+|+++|+.++...+...|++|||.|||||.+|+||+|+|.++   .+.++||++|||||||||
T Consensus        81 ~e~G~L~~lL~~~~~~~~~~~C~~Cgg~rfv~C~~C~Gs~k~~~~~~~~~~~~~rC~~Cnengl~~c  147 (147)
T cd03031          81 NESGELRKLLKGIRARAGGGVCEGCGGARFVPCSECNGSCKVFAENATAAGGFLRCPECNENGLVRC  147 (147)
T ss_pred             HHcCCHHHHHhhcccccCCCCCCCCCCcCeEECCCCCCcceEEeccCcccccEEECCCCCccccccC
Confidence            9999999999999888888899999999999999999999999877   477999999999999999

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.

>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif

Probab=99.91  E-value=2.8e-24  Score=170.32  Aligned_cols=88  Identities=19%  Similarity=0.233  Sum_probs=84.7

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCC--CCCCCcEEEeCCEEEechhHHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGG--KNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~--~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      |+||+||++|+|++...|++|++||++++|+|+|+||++|++.+++|++++|.  +..++|||||+|+||||+|++.+|+
T Consensus         2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~eiDI~~d~~~r~em~~~~~~~~g~~tvPQIFi~~~~iGg~ddl~~l~   81 (92)
T cd03030           2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISMNEENRQWMRENVPNENGKPLPPQIFNGDEYCGDYEAFFEAK   81 (92)
T ss_pred             EEEEEecccccHHHHHHHHHHHHHHHHCCCceEEEecCCCHHHHHHHHHhcCCCCCCCCCCEEEECCEEeeCHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999874  4589999999999999999999999


Q ss_pred             hhccHHHHhc
Q 048504          209 ETGELARVLD  218 (277)
Q Consensus       209 EsGeL~klL~  218 (277)
                      ++|+|.++|+
T Consensus        82 e~g~L~~lLk   91 (92)
T cd03030          82 ENNTLEEFLK   91 (92)
T ss_pred             hCCCHHHHhC
Confidence            9999999986

The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.

>TIGR00365 monothiol glutaredoxin, Grx4 family

Probab=99.88  E-value=1.4e-22  Score=160.73  Aligned_cols=95  Identities=22%  Similarity=0.340  Sum_probs=85.8

Q ss_pred             ccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEe
Q 048504          120 SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVG  199 (277)
Q Consensus       120 ~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IG  199 (277)
                      +++...+.+++||||+++. .-+..||+|.+|+++|+.+||+|+++||..+++.+++|++++|.  .++|||||||++||
T Consensus         3 ~~v~~~i~~~~Vvvf~kg~-~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~~~~~~~~l~~~tg~--~tvP~vfi~g~~iG   79 (97)
T TIGR00365         3 ERIKEQIKENPVVLYMKGT-PQFPQCGFSARAVQILKACGVPFAYVNVLEDPEIRQGIKEYSNW--PTIPQLYVKGEFVG   79 (97)
T ss_pred             HHHHHHhccCCEEEEEccC-CCCCCCchHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhCC--CCCCEEEECCEEEe
Confidence            3456678899999998864 23457899999999999999999999999999999999999986  79999999999999


Q ss_pred             chhHHHHHHhhccHHHHh
Q 048504          200 NADVLKSMYETGELARVL  217 (277)
Q Consensus       200 G~del~~L~EsGeL~klL  217 (277)
                      |+|++.+|+++|+|.++|
T Consensus        80 G~ddl~~l~~~g~L~~~l   97 (97)
T TIGR00365        80 GCDIIMEMYQSGELQTLL   97 (97)
T ss_pred             ChHHHHHHHHCcChHHhC
Confidence            999999999999999986

The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.

>PRK10824 glutaredoxin-4; Provisional

Probab=99.87  E-value=3.5e-22  Score=164.50  Aligned_cols=100  Identities=19%  Similarity=0.263  Sum_probs=89.4

Q ss_pred             ccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEe
Q 048504          120 SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVG  199 (277)
Q Consensus       120 ~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IG  199 (277)
                      +++...+.+++||||+++. .-+..||+|.+|+++|+.++|+|.++||..|++.+++|++++|.  +|+|||||||+|||
T Consensus         6 ~~v~~~I~~~~Vvvf~Kg~-~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~d~~~~~~l~~~sg~--~TVPQIFI~G~~IG   82 (115)
T PRK10824          6 EKIQRQIAENPILLYMKGS-PKLPSCGFSAQAVQALSACGERFAYVDILQNPDIRAELPKYANW--PTFPQLWVDGELVG   82 (115)
T ss_pred             HHHHHHHhcCCEEEEECCC-CCCCCCchHHHHHHHHHHcCCCceEEEecCCHHHHHHHHHHhCC--CCCCeEEECCEEEc
Confidence            4567778899999999863 22346799999999999999999999999999999999999976  89999999999999


Q ss_pred             chhHHHHHHhhccHHHHhcCCCC
Q 048504          200 NADVLKSMYETGELARVLDGFPR  222 (277)
Q Consensus       200 G~del~~L~EsGeL~klL~~~~~  222 (277)
                      |+|++.+|+++|+|+++|+.+..
T Consensus        83 G~ddl~~l~~~G~L~~lL~~~~~  105 (115)
T PRK10824         83 GCDIVIEMYQRGELQQLIKETAA  105 (115)
T ss_pred             ChHHHHHHHHCCCHHHHHHHHHh
Confidence            99999999999999999976543

>TIGR02189 GlrX-like_plant Glutaredoxin-like family

Probab=99.86  E-value=9.9e-22  Score=156.39  Aligned_cols=90  Identities=20%  Similarity=0.272  Sum_probs=80.0

Q ss_pred             CCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHH---HHHHHHHHhCCCCCCCcEEEeCCEEEec
Q 048504          124 LPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSA---YKKELQCVFGGKNVTLPQVFIRGKHVGN  200 (277)
Q Consensus       124 ~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~---~reELke~lG~~~~tvPqVFI~G~~IGG  200 (277)
                      ..+.+++|+||++++|      |+|.+|+++|++++|+|+++||+.+++   ++++|.+++|.  .++|||||+|++|||
T Consensus         3 ~~i~~~~Vvvysk~~C------p~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg~--~tvP~Vfi~g~~iGG   74 (99)
T TIGR02189         3 RMVSEKAVVIFSRSSC------CMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGCS--PAVPAVFVGGKLVGG   74 (99)
T ss_pred             hhhccCCEEEEECCCC------HHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcCC--CCcCeEEECCEEEcC
Confidence            3467899999999875      899999999999999999999998855   55667777776  899999999999999


Q ss_pred             hhHHHHHHhhccHHHHhcCCC
Q 048504          201 ADVLKSMYETGELARVLDGFP  221 (277)
Q Consensus       201 ~del~~L~EsGeL~klL~~~~  221 (277)
                      ++++.+|+++|+|+++|+.++
T Consensus        75 ~ddl~~l~~~G~L~~~l~~~~   95 (99)
T TIGR02189        75 LENVMALHISGSLVPMLKQAG   95 (99)
T ss_pred             HHHHHHHHHcCCHHHHHHHhC
Confidence            999999999999999998654

This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.

>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins

Probab=99.85  E-value=5.5e-21  Score=148.86  Aligned_cols=89  Identities=24%  Similarity=0.312  Sum_probs=79.6

Q ss_pred             cCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechh
Q 048504          123 RLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNAD  202 (277)
Q Consensus       123 ~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~d  202 (277)
                      +..+.+++||||+++. .-...||+|.+|+++|+.++|+|+++||..|++++++|.+++|.  .++|+|||||++|||++
T Consensus         2 ~~~i~~~~vvvf~k~~-~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~~~~~~~l~~~~g~--~tvP~vfi~g~~iGG~~   78 (90)
T cd03028           2 KKLIKENPVVLFMKGT-PEEPRCGFSRKVVQILNQLGVDFGTFDILEDEEVRQGLKEYSNW--PTFPQLYVNGELVGGCD   78 (90)
T ss_pred             hhhhccCCEEEEEcCC-CCCCCCcHHHHHHHHHHHcCCCeEEEEcCCCHHHHHHHHHHhCC--CCCCEEEECCEEEeCHH
Confidence            3456789999998853 12346899999999999999999999999999999999999987  79999999999999999


Q ss_pred             HHHHHHhhccHH
Q 048504          203 VLKSMYETGELA  214 (277)
Q Consensus       203 el~~L~EsGeL~  214 (277)
                      ++++||++|+|+
T Consensus        79 ~l~~l~~~g~L~   90 (90)
T cd03028          79 IVKEMHESGELQ   90 (90)
T ss_pred             HHHHHHHcCCcC
Confidence            999999999984

The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein

>PHA03050 glutaredoxin; Provisional

Probab=99.85  E-value=4.5e-21  Score=155.54  Aligned_cols=95  Identities=14%  Similarity=0.269  Sum_probs=85.8

Q ss_pred             ccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCC---eEEEEECCC---CHHHHHHHHHHhCCCCCCCcEEEe
Q 048504          120 SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRV---WVDERDVSM---DSAYKKELQCVFGGKNVTLPQVFI  193 (277)
Q Consensus       120 ~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV---~y~ErDVs~---d~~~reELke~lG~~~~tvPqVFI  193 (277)
                      .++...+..++|+||++++|      |||.+|+++|+.++|   +|+++||+.   +.+++++|.+++|.  .+||+|||
T Consensus         4 ~~v~~~i~~~~V~vys~~~C------PyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~--~tVP~IfI   75 (108)
T PHA03050          4 EFVQQRLANNKVTIFVKFTC------PFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGG--RTVPRIFF   75 (108)
T ss_pred             HHHHHHhccCCEEEEECCCC------hHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCC--CCcCEEEE
Confidence            34556677899999999975      899999999999999   799999986   57889999999987  79999999


Q ss_pred             CCEEEechhHHHHHHhhccHHHHhcCCCC
Q 048504          194 RGKHVGNADVLKSMYETGELARVLDGFPR  222 (277)
Q Consensus       194 ~G~~IGG~del~~L~EsGeL~klL~~~~~  222 (277)
                      ||++|||++++++||++|+|.++|+.++.
T Consensus        76 ~g~~iGG~ddl~~l~~~g~L~~~l~~~~~  104 (108)
T PHA03050         76 GKTSIGGYSDLLEIDNMDALGDILSSIGV  104 (108)
T ss_pred             CCEEEeChHHHHHHHHcCCHHHHHHHccc
Confidence            99999999999999999999999987654

>TIGR02181 GRX_bact Glutaredoxin, GrxC family

Probab=99.81  E-value=1.2e-19  Score=136.13  Aligned_cols=79  Identities=28%  Similarity=0.420  Sum_probs=74.9

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHHhh
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYET  210 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~Es  210 (277)
                      |+||++++      ||+|.+|+.+|++++|+|+++||+++++.++++.+++|.  .++|+|||+|++|||++++.+|+++
T Consensus         1 v~ly~~~~------Cp~C~~a~~~L~~~~i~~~~~di~~~~~~~~~~~~~~g~--~~vP~i~i~g~~igg~~~~~~~~~~   72 (79)
T TIGR02181         1 VTIYTKPY------CPYCTRAKALLSSKGVTFTEIRVDGDPALRDEMMQRSGR--RTVPQIFIGDVHVGGCDDLYALDRE   72 (79)
T ss_pred             CEEEecCC------ChhHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHHhCC--CCcCEEEECCEEEcChHHHHHHHHc
Confidence            68999986      589999999999999999999999999999999999885  8999999999999999999999999


Q ss_pred             ccHHHHh
Q 048504          211 GELARVL  217 (277)
Q Consensus       211 GeL~klL  217 (277)
                      |+|+++|
T Consensus        73 g~l~~~l   79 (79)
T TIGR02181        73 GKLDPLL   79 (79)
T ss_pred             CChhhhC
Confidence            9999886

This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.

>PRK10638 glutaredoxin 3; Provisional

Probab=99.81  E-value=2.9e-19  Score=136.29  Aligned_cols=82  Identities=24%  Similarity=0.398  Sum_probs=77.1

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      .+|+||++++      |++|.+|+.+|+.++|+|+++||+.+++.++++.++.|.  .++|+||+||++|||++++.+|+
T Consensus         2 ~~v~ly~~~~------Cp~C~~a~~~L~~~gi~y~~~dv~~~~~~~~~l~~~~g~--~~vP~i~~~g~~igG~~~~~~~~   73 (83)
T PRK10638          2 ANVEIYTKAT------CPFCHRAKALLNSKGVSFQEIPIDGDAAKREEMIKRSGR--TTVPQIFIDAQHIGGCDDLYALD   73 (83)
T ss_pred             CcEEEEECCC------ChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHhCC--CCcCEEEECCEEEeCHHHHHHHH
Confidence            4799999986      589999999999999999999999998889999999987  79999999999999999999999


Q ss_pred             hhccHHHHhc
Q 048504          209 ETGELARVLD  218 (277)
Q Consensus       209 EsGeL~klL~  218 (277)
                      ++|+|..+|+
T Consensus        74 ~~g~l~~~~~   83 (83)
T PRK10638         74 ARGGLDPLLK   83 (83)
T ss_pred             HcCCHHHHhC
Confidence            9999999984

>PTZ00062 glutaredoxin; Provisional

Probab=99.79  E-value=1.5e-19  Score=161.71  Aligned_cols=98  Identities=19%  Similarity=0.319  Sum_probs=88.4

Q ss_pred             ccccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEE
Q 048504          118 NESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKH  197 (277)
Q Consensus       118 ~~~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~  197 (277)
                      ...++...+..++|+||.++.. -...|++|++++.+|+.++|+|.++||..|++.+++|++++|.  .|+|||||||++
T Consensus       102 ~~~~v~~li~~~~Vvvf~Kg~~-~~p~C~~C~~~k~~L~~~~i~y~~~DI~~d~~~~~~l~~~sg~--~TvPqVfI~G~~  178 (204)
T PTZ00062        102 TVEKIERLIRNHKILLFMKGSK-TFPFCRFSNAVVNMLNSSGVKYETYNIFEDPDLREELKVYSNW--PTYPQLYVNGEL  178 (204)
T ss_pred             HHHHHHHHHhcCCEEEEEccCC-CCCCChhHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHhCC--CCCCeEEECCEE
Confidence            4467888899999999999521 1147899999999999999999999999999999999999976  899999999999


Q ss_pred             EechhHHHHHHhhccHHHHhc
Q 048504          198 VGNADVLKSMYETGELARVLD  218 (277)
Q Consensus       198 IGG~del~~L~EsGeL~klL~  218 (277)
                      |||+|++++|+++|+|+++|.
T Consensus       179 IGG~d~l~~l~~~G~L~~~l~  199 (204)
T PTZ00062        179 IGGHDIIKELYESNSLRKVIP  199 (204)
T ss_pred             EcChHHHHHHHHcCChhhhhh
Confidence            999999999999999999985

>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]

Probab=99.78  E-value=7.5e-19  Score=142.57  Aligned_cols=93  Identities=27%  Similarity=0.395  Sum_probs=80.9

Q ss_pred             cccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC---HHHHHHHHHHhCCCCCCCcEEEeCCEE
Q 048504          121 SIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD---SAYKKELQCVFGGKNVTLPQVFIRGKH  197 (277)
Q Consensus       121 ~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d---~~~reELke~lG~~~~tvPqVFI~G~~  197 (277)
                      .+...+.+++||||++++|      ++|.+++.+|..+++.+..++++.+   .+++++|.+++|+  +|+|+|||+|++
T Consensus         6 ~v~~~i~~~~VVifSKs~C------~~c~~~k~ll~~~~v~~~vvELD~~~~g~eiq~~l~~~tg~--~tvP~vFI~Gk~   77 (104)
T KOG1752|consen    6 KVRKMISENPVVIFSKSSC------PYCHRAKELLSDLGVNPKVVELDEDEDGSEIQKALKKLTGQ--RTVPNVFIGGKF   77 (104)
T ss_pred             HHHHHhhcCCEEEEECCcC------chHHHHHHHHHhCCCCCEEEEccCCCCcHHHHHHHHHhcCC--CCCCEEEECCEE
Confidence            4667788999999999975      8999999999999998766666544   3677888888877  799999999999


Q ss_pred             EechhHHHHHHhhccHHHHhcCCC
Q 048504          198 VGNADVLKSMYETGELARVLDGFP  221 (277)
Q Consensus       198 IGG~del~~L~EsGeL~klL~~~~  221 (277)
                      |||++++++||.+|+|..+|+.+.
T Consensus        78 iGG~~dl~~lh~~G~L~~~l~~~~  101 (104)
T KOG1752|consen   78 IGGASDLMALHKSGELVPLLKEAG  101 (104)
T ss_pred             EcCHHHHHHHHHcCCHHHHHHHhh
Confidence            999999999999999999998654

>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=99.76  E-value=5.1e-18  Score=125.12  Aligned_cols=75  Identities=28%  Similarity=0.443  Sum_probs=69.2

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHHh
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYE  209 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~E  209 (277)
                      +|+||+++.      |++|.+|+.+|+.++|+|+++||+.+++.+++|.++.|. ..++|+|||+|++|||++++.+||+
T Consensus         1 ~i~ly~~~~------Cp~C~~ak~~L~~~~i~~~~i~i~~~~~~~~~~~~~~~~-~~~vP~v~i~g~~igg~~~~~~~~~   73 (75)
T cd03418           1 KVEIYTKPN------CPYCVRAKALLDKKGVDYEEIDVDGDPALREEMINRSGG-RRTVPQIFIGDVHIGGCDDLYALER   73 (75)
T ss_pred             CEEEEeCCC------ChHHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCC-CCccCEEEECCEEEeChHHHHHHHh
Confidence            589999986      589999999999999999999999999999999998876 1399999999999999999999999


Q ss_pred             hc
Q 048504          210 TG  211 (277)
Q Consensus       210 sG  211 (277)
                      +|
T Consensus        74 ~g   75 (75)
T cd03418          74 KG   75 (75)
T ss_pred             Cc
Confidence            87

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i

>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions

Probab=99.76  E-value=5.1e-18  Score=126.09  Aligned_cols=73  Identities=33%  Similarity=0.423  Sum_probs=68.4

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      ++|+||++++|      ++|.+|+++|+.++|+|+++||..++..+++|++++|.  .++|+|||||++|||+++|.+|+
T Consensus         1 ~~v~ly~~~~C------~~C~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~~g~--~~vP~v~i~~~~iGg~~~~~~~~   72 (73)
T cd03027           1 GRVTIYSRLGC------EDCTAVRLFLREKGLPYVEINIDIFPERKAELEERTGS--SVVPQIFFNEKLVGGLTDLKSLE   72 (73)
T ss_pred             CEEEEEecCCC------hhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCC--CCcCEEEECCEEEeCHHHHHhhc
Confidence            47999999865      89999999999999999999999999999999999986  78999999999999999999987


Q ss_pred             h
Q 048504          209 E  209 (277)
Q Consensus       209 E  209 (277)
                      |
T Consensus        73 ~   73 (73)
T cd03027          73 E   73 (73)
T ss_pred             C
Confidence            5

GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.

>TIGR02180 GRX_euk Glutaredoxin

Probab=99.70  E-value=6.8e-17  Score=120.47  Aligned_cols=79  Identities=28%  Similarity=0.479  Sum_probs=70.0

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCe--EEEEECCCC---HHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVW--VDERDVSMD---SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLK  205 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~--y~ErDVs~d---~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~  205 (277)
                      |++|++++|      |+|.+++.+|++++++  |..+||+.+   .+.+++|.+..|.  .++|+|||||++|||++++.
T Consensus         1 V~~f~~~~C------p~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~--~~vP~v~i~g~~igg~~~~~   72 (84)
T TIGR02180         1 VVVFSKSYC------PYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQ--RTVPNIFINGKFIGGCSDLL   72 (84)
T ss_pred             CEEEECCCC------hhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCC--CCCCeEEECCEEEcCHHHHH
Confidence            689999875      8999999999999998  877777654   4567778888876  79999999999999999999


Q ss_pred             HHHhhccHHHHh
Q 048504          206 SMYETGELARVL  217 (277)
Q Consensus       206 ~L~EsGeL~klL  217 (277)
                      +|+++|+|+++|
T Consensus        73 ~~~~~g~l~~~~   84 (84)
T TIGR02180        73 ALYKSGKLAELL   84 (84)
T ss_pred             HHHHcCChhhhC
Confidence            999999999886

This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.

>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=99.70  E-value=4.3e-17  Score=131.67  Aligned_cols=99  Identities=22%  Similarity=0.305  Sum_probs=89.7

Q ss_pred             cccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCC-CeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEE
Q 048504          119 ESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFR-VWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKH  197 (277)
Q Consensus       119 ~~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~g-V~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~  197 (277)
                      .+.|...+.+++||||.+.. .-.+.|-+..+|-+||...| ++|..+||-.|+++|+.|++..  +|.|+||+||+|++
T Consensus         5 ~~~I~~~i~~n~VvLFMKGt-p~~P~CGFS~~~vqiL~~~g~v~~~~vnVL~d~eiR~~lk~~s--~WPT~PQLyi~GEf   81 (105)
T COG0278           5 LDRIQKQIKENPVVLFMKGT-PEFPQCGFSAQAVQILSACGVVDFAYVDVLQDPEIRQGLKEYS--NWPTFPQLYVNGEF   81 (105)
T ss_pred             HHHHHHHhhcCceEEEecCC-CCCCCCCccHHHHHHHHHcCCcceeEEeeccCHHHHhccHhhc--CCCCCceeeECCEE
Confidence            35677888999999999976 34566778899999999999 8999999999999999999998  57999999999999


Q ss_pred             EechhHHHHHHhhccHHHHhcCC
Q 048504          198 VGNADVLKSMYETGELARVLDGF  220 (277)
Q Consensus       198 IGG~del~~L~EsGeL~klL~~~  220 (277)
                      |||+|-+.+|+++|+|+++|+..
T Consensus        82 vGG~DIv~Em~q~GELq~~l~~~  104 (105)
T COG0278          82 VGGCDIVREMYQSGELQTLLKEA  104 (105)
T ss_pred             eccHHHHHHHHHcchHHHHHHhc
Confidence            99999999999999999999753

>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=99.68  E-value=1.9e-16  Score=118.09  Aligned_cols=79  Identities=27%  Similarity=0.447  Sum_probs=70.0

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC---HHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD---SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d---~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      +|++|++.+      ||+|.+|+.+|+.++++|.++|++.+   .++++++++++|.  .++|+||++|++|||++++.+
T Consensus         1 ~v~~y~~~~------Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~--~~~P~v~~~g~~igg~~~~~~   72 (82)
T cd03419           1 PVVVFSKSY------CPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQ--RTVPNVFIGGKFIGGCDDLMA   72 (82)
T ss_pred             CEEEEEcCC------CHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCC--CCCCeEEECCEEEcCHHHHHH
Confidence            589999986      58999999999999999887777655   4567888898876  899999999999999999999


Q ss_pred             HHhhccHHHH
Q 048504          207 MYETGELARV  216 (277)
Q Consensus       207 L~EsGeL~kl  216 (277)
                      |.++|+|+++
T Consensus        73 ~~~~g~l~~~   82 (82)
T cd03419          73 LHKSGKLVKL   82 (82)
T ss_pred             HHHcCCccCC
Confidence            9999999763

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes

>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]

Probab=99.67  E-value=1.8e-16  Score=121.97  Aligned_cols=76  Identities=29%  Similarity=0.427  Sum_probs=67.0

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      .|+||+++.      ||+|.+|+++|+.+||.|+++|+.+++  +.++.+++..|.  +++|||||||++|||.+++.++
T Consensus         2 ~v~iyt~~~------CPyC~~ak~~L~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~--~tvP~I~i~~~~igg~~d~~~~   73 (80)
T COG0695           2 NVTIYTKPG------CPYCKRAKRLLDRKGVDYEEIDVDDDEPEEAREMVKRGKGQ--RTVPQIFIGGKHVGGCDDLDAL   73 (80)
T ss_pred             CEEEEECCC------CchHHHHHHHHHHcCCCcEEEEecCCcHHHHHHHHHHhCCC--CCcCEEEECCEEEeCcccHHHH
Confidence            589999986      589999999999999999999999987  555555555566  8999999999999999999999


Q ss_pred             HhhccH
Q 048504          208 YETGEL  213 (277)
Q Consensus       208 ~EsGeL  213 (277)
                      +..|.|
T Consensus        74 ~~~~~l   79 (80)
T COG0695          74 EAKGKL   79 (80)
T ss_pred             HhhccC
Confidence            988876

>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria

Probab=99.66  E-value=5.1e-16  Score=114.85  Aligned_cols=70  Identities=23%  Similarity=0.409  Sum_probs=62.8

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      +|+||++++      ||+|.+|+++|+.++|+|+++||+.+. ..++++++.|.  .++|+|||||++|||+++|.++.
T Consensus         2 ~v~lys~~~------Cp~C~~ak~~L~~~~i~~~~~~v~~~~-~~~~~~~~~g~--~~vP~ifi~g~~igg~~~l~~~l   71 (72)
T cd03029           2 SVSLFTKPG------CPFCARAKAALQENGISYEEIPLGKDI-TGRSLRAVTGA--MTVPQVFIDGELIGGSDDLEKYF   71 (72)
T ss_pred             eEEEEECCC------CHHHHHHHHHHHHcCCCcEEEECCCCh-hHHHHHHHhCC--CCcCeEEECCEEEeCHHHHHHHh
Confidence            699999986      589999999999999999999999887 45677888776  89999999999999999998764

PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.

>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=99.66  E-value=7.9e-16  Score=109.53  Aligned_cols=72  Identities=29%  Similarity=0.507  Sum_probs=67.5

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHHh
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYE  209 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~E  209 (277)
                      +|+||++++      |++|++|+.+|+.++++|.++|+..+++.+++|++++|.  .++|+||+||++|||++++++|++
T Consensus         1 ~v~ly~~~~------Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~~--~~~P~~~~~~~~igg~~~~~~~~~   72 (72)
T cd02066           1 KVVVFSKST------CPYCKRAKRLLESLGIEFEEIDILEDGELREELKELSGW--PTVPQIFINGEFIGGYDDLKALHE   72 (72)
T ss_pred             CEEEEECCC------CHHHHHHHHHHHHcCCcEEEEECCCCHHHHHHHHHHhCC--CCcCEEEECCEEEecHHHHHHhhC
Confidence            589999987      589999999999999999999999999999999999986  899999999999999999999875

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which

>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised

Probab=99.64  E-value=6.4e-16  Score=124.53  Aligned_cols=89  Identities=26%  Similarity=0.367  Sum_probs=74.0

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhC-------CCCCCCcEEEeCCEEEechh
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG-------GKNVTLPQVFIRGKHVGNAD  202 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG-------~~~~tvPqVFI~G~~IGG~d  202 (277)
                      .|.||+|+..|.++.-..++++..||++++|+|+++||++|++.++.+++..|       .+...+||||+||+|+|++|
T Consensus         2 ~I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~vDIa~~e~~r~~mr~~~g~~~~~~~~~~~lpPqiF~~~~Y~Gdye   81 (99)
T PF04908_consen    2 VIKVYISSISGSREIKKRQQRVLMILEAKKIPFEEVDIAMDEEARQWMRENAGPEEKDPGNGKPLPPQIFNGDEYCGDYE   81 (99)
T ss_dssp             SEEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEEETTT-HHHHHHHHHHT--CCCS-TSTT--S-EEEETTEEEEEHH
T ss_pred             EEEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEEeCcCCHHHHHHHHHhccccccCCCCCCCCCCEEEeCCEEEeeHH
Confidence            38899999999999999999999999999999999999999999999999985       23356689999999999999


Q ss_pred             HHHHHHhhccHHHHhc
Q 048504          203 VLKSMYETGELARVLD  218 (277)
Q Consensus       203 el~~L~EsGeL~klL~  218 (277)
                      ++.+++|.|+|.++|+
T Consensus        82 ~f~ea~E~~~L~~fL~   97 (99)
T PF04908_consen   82 DFEEANENGELEEFLK   97 (99)
T ss_dssp             HHHHHHCTT-HHHHHT
T ss_pred             HHHHHHhhCHHHHHhC
Confidence            9999999999999996

SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.

>TIGR02190 GlrX-dom Glutaredoxin-family domain

Probab=99.64  E-value=1.6e-15  Score=115.02  Aligned_cols=73  Identities=26%  Similarity=0.390  Sum_probs=64.4

Q ss_pred             CCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHH
Q 048504          126 GTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLK  205 (277)
Q Consensus       126 ~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~  205 (277)
                      .+.++|+||++++|      ++|.+||++|+.+||+|+++||+.+... +++.+++|.  .++|+|||||++|||+++|.
T Consensus         5 ~~~~~V~ly~~~~C------p~C~~ak~~L~~~gi~y~~idi~~~~~~-~~~~~~~g~--~~vP~i~i~g~~igG~~~l~   75 (79)
T TIGR02190         5 RKPESVVVFTKPGC------PFCAKAKATLKEKGYDFEEIPLGNDARG-RSLRAVTGA--TTVPQVFIGGKLIGGSDELE   75 (79)
T ss_pred             CCCCCEEEEECCCC------HhHHHHHHHHHHcCCCcEEEECCCChHH-HHHHHHHCC--CCcCeEEECCEEEcCHHHHH
Confidence            45788999999875      8999999999999999999999987554 567777776  89999999999999999998


Q ss_pred             HH
Q 048504          206 SM  207 (277)
Q Consensus       206 ~L  207 (277)
                      ++
T Consensus        76 ~~   77 (79)
T TIGR02190        76 AY   77 (79)
T ss_pred             HH
Confidence            75

This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.

>PRK11200 grxA glutaredoxin 1; Provisional

Probab=99.64  E-value=1.7e-15  Score=115.70  Aligned_cols=75  Identities=17%  Similarity=0.256  Sum_probs=67.5

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh-----CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG-----FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVL  204 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~-----~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del  204 (277)
                      +|+||++++      |++|.+|+++|+.     .+|+|+++||..+...+++|.++.|....++|||||||++|||+++|
T Consensus         2 ~v~iy~~~~------C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~~~~~el~~~~~~~~~~vP~ifi~g~~igg~~~~   75 (85)
T PRK11200          2 FVVIFGRPG------CPYCVRAKELAEKLSEERDDFDYRYVDIHAEGISKADLEKTVGKPVETVPQIFVDQKHIGGCTDF   75 (85)
T ss_pred             EEEEEeCCC------ChhHHHHHHHHHhhcccccCCcEEEEECCCChHHHHHHHHHHCCCCCcCCEEEECCEEEcCHHHH
Confidence            699999986      5899999999999     89999999999887778899998875447999999999999999999


Q ss_pred             HHHHhh
Q 048504          205 KSMYET  210 (277)
Q Consensus       205 ~~L~Es  210 (277)
                      .++++.
T Consensus        76 ~~~~~~   81 (85)
T PRK11200         76 EAYVKE   81 (85)
T ss_pred             HHHHHH
Confidence            998764

>TIGR02183 GRXA Glutaredoxin, GrxA family

Probab=99.64  E-value=1.6e-15  Score=117.11  Aligned_cols=75  Identities=19%  Similarity=0.325  Sum_probs=65.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLK  205 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~  205 (277)
                      |+||++++      ||+|.+|+++|+.+     +++|+++|+..+...+++|.++.|....++|+|||||++|||+++|.
T Consensus         2 V~vys~~~------Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~~~~~~~l~~~~g~~~~tVP~ifi~g~~igG~~dl~   75 (86)
T TIGR02183         2 VVIFGRPG------CPYCVRAKQLAEKLAIERADFEFRYIDIHAEGISKADLEKTVGKPVETVPQIFVDEKHVGGCTDFE   75 (86)
T ss_pred             EEEEeCCC------CccHHHHHHHHHHhCcccCCCcEEEEECCCCHHHHHHHHHHhCCCCCCcCeEEECCEEecCHHHHH
Confidence            79999986      58999999999998     46799999998776678899988753369999999999999999999


Q ss_pred             HHHhhc
Q 048504          206 SMYETG  211 (277)
Q Consensus       206 ~L~EsG  211 (277)
                      ++++.+
T Consensus        76 ~~~~~~   81 (86)
T TIGR02183        76 QLVKEN   81 (86)
T ss_pred             HHHHhc
Confidence            998764

This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.

>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=99.57  E-value=1.1e-14  Score=132.06  Aligned_cols=97  Identities=21%  Similarity=0.292  Sum_probs=88.7

Q ss_pred             ccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEe
Q 048504          120 SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVG  199 (277)
Q Consensus       120 ~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IG  199 (277)
                      +++...+..++|+||-++.. -.+-|-+.+.+..||+.++|+|...||..|.++|+-|++..  .|.|+|||||+|++||
T Consensus       130 ~~l~~lv~a~~v~lFmKG~p-~~P~CGFS~~~v~iL~~~nV~~~~fdIL~DeelRqglK~fS--dWPTfPQlyI~GEFiG  206 (227)
T KOG0911|consen  130 NRLEKLVKAKPVMLFMKGTP-EEPKCGFSRQLVGILQSHNVNYTIFDVLTDEELRQGLKEFS--DWPTFPQLYVKGEFIG  206 (227)
T ss_pred             HHHHHhcccCeEEEEecCCC-CcccccccHHHHHHHHHcCCCeeEEeccCCHHHHHHhhhhc--CCCCccceeECCEecc
Confidence            48888999999999999863 34556677899999999999999999999999999999998  5799999999999999


Q ss_pred             chhHHHHHHhhccHHHHhcC
Q 048504          200 NADVLKSMYETGELARVLDG  219 (277)
Q Consensus       200 G~del~~L~EsGeL~klL~~  219 (277)
                      |.|-+.+||++|+|+..|+.
T Consensus       207 GlDIl~~m~~~geL~~~l~~  226 (227)
T KOG0911|consen  207 GLDILKEMHEKGELVYTLKE  226 (227)
T ss_pred             CcHHHHHHhhcccHHHHhhc
Confidence            99999999999999999975

>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors

Probab=99.54  E-value=3.2e-14  Score=101.91  Aligned_cols=60  Identities=32%  Similarity=0.435  Sum_probs=56.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~I  198 (277)
                      |+||++.+      |++|.+++++|+++||+|+++||+.+++.+++|+++.|.  .++|+|||||++|
T Consensus         1 V~vy~~~~------C~~C~~~~~~L~~~~i~y~~~dv~~~~~~~~~l~~~~g~--~~~P~v~i~g~~I   60 (60)
T PF00462_consen    1 VVVYTKPG------CPYCKKAKEFLDEKGIPYEEVDVDEDEEAREELKELSGV--RTVPQVFIDGKFI   60 (60)
T ss_dssp             EEEEESTT------SHHHHHHHHHHHHTTBEEEEEEGGGSHHHHHHHHHHHSS--SSSSEEEETTEEE
T ss_pred             cEEEEcCC------CcCHHHHHHHHHHcCCeeeEcccccchhHHHHHHHHcCC--CccCEEEECCEEC
Confidence            78999975      689999999999999999999999999999999999976  8999999999987

Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....

>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional

Probab=99.50  E-value=9.6e-14  Score=135.12  Aligned_cols=84  Identities=19%  Similarity=0.218  Sum_probs=71.0

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHH--------hCCCCCCCcEEEeCCEEEec
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCV--------FGGKNVTLPQVFIRGKHVGN  200 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~--------lG~~~~tvPqVFI~G~~IGG  200 (277)
                      .+|+||++++      ||+|.+||++|+.+||+|+++||+.++...+.+.+.        +|.  .++|||||||++|||
T Consensus         2 ~~V~vys~~~------Cp~C~~aK~~L~~~gi~~~~idi~~~~~~~~~~~~~~~~~~~~~~g~--~tvP~ifi~~~~igG   73 (410)
T PRK12759          2 VEVRIYTKTN------CPFCDLAKSWFGANDIPFTQISLDDDVKRAEFYAEVNKNILLVEEHI--RTVPQIFVGDVHIGG   73 (410)
T ss_pred             CcEEEEeCCC------CHHHHHHHHHHHHCCCCeEEEECCCChhHHHHHHHHhhccccccCCC--CccCeEEECCEEEeC
Confidence            4799999996      589999999999999999999999887544322222        344  799999999999999


Q ss_pred             hhHHHHHHhhccHHHHhcCCCC
Q 048504          201 ADVLKSMYETGELARVLDGFPR  222 (277)
Q Consensus       201 ~del~~L~EsGeL~klL~~~~~  222 (277)
                      ++++.+  .+|+|..+|++.+-
T Consensus        74 f~~l~~--~~g~l~~~~~~~~~   93 (410)
T PRK12759         74 YDNLMA--RAGEVIARVKGSSL   93 (410)
T ss_pred             chHHHH--HhCCHHHHhcCCcc
Confidence            999987  89999999998553

>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH

Probab=99.35  E-value=3.2e-12  Score=94.99  Aligned_cols=64  Identities=13%  Similarity=0.176  Sum_probs=56.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCE-EEechhH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGK-HVGNADV  203 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~-~IGG~de  203 (277)
                      |+||+++.      |++|.+|+++|++++|+|+++||..|+..++++++. |.  .++|+||++|. +|||++.
T Consensus         1 v~ly~~~~------Cp~C~~ak~~L~~~~i~~~~~di~~~~~~~~~~~~~-g~--~~vP~v~~~g~~~~~G~~~   65 (72)
T TIGR02194         1 ITVYSKNN------CVQCKMTKKALEEHGIAFEEINIDEQPEAIDYVKAQ-GF--RQVPVIVADGDLSWSGFRP   65 (72)
T ss_pred             CEEEeCCC------CHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHc-CC--cccCEEEECCCcEEeccCH
Confidence            68999986      589999999999999999999999999999988764 75  79999999775 9999864

NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.

>PRK10329 glutaredoxin-like protein; Provisional

Probab=99.35  E-value=7e-12  Score=96.59  Aligned_cols=65  Identities=17%  Similarity=0.126  Sum_probs=58.8

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADV  203 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~de  203 (277)
                      +|+||++++      |++|.++|.+|+.+||+|+++||+.+++..++++. .|.  .++|+|+++|..|+|++.
T Consensus         2 ~v~lYt~~~------Cp~C~~ak~~L~~~gI~~~~idi~~~~~~~~~~~~-~g~--~~vPvv~i~~~~~~Gf~~   66 (81)
T PRK10329          2 RITIYTRND------CVQCHATKRAMESRGFDFEMINVDRVPEAAETLRA-QGF--RQLPVVIAGDLSWSGFRP   66 (81)
T ss_pred             EEEEEeCCC------CHhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHH-cCC--CCcCEEEECCEEEecCCH
Confidence            699999986      58999999999999999999999999988888876 465  799999999999999863

>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family

Probab=99.13  E-value=6.1e-10  Score=79.62  Aligned_cols=66  Identities=26%  Similarity=0.328  Sum_probs=59.7

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADV  203 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~de  203 (277)
                      +|+||+.++|      ++|++++.+|+.++|+|.++|+..++...+++.++.|.  .++|.++++|+.++|++.
T Consensus         1 ~i~lf~~~~C------~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~~~~~~--~~vP~~~~~~~~~~g~~~   66 (74)
T TIGR02196         1 KVKVYTTPWC------PPCKKAKEYLTSKGIAFEEIDVEKDSAAREEVLKVLGQ--RGVPVIVIGHKIIVGFDP   66 (74)
T ss_pred             CEEEEcCCCC------hhHHHHHHHHHHCCCeEEEEeccCCHHHHHHHHHHhCC--CcccEEEECCEEEeeCCH
Confidence            4899999875      79999999999999999999999998888899998876  789999999999988754

This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.

>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile

Probab=99.03  E-value=1.8e-09  Score=77.11  Aligned_cols=66  Identities=23%  Similarity=0.269  Sum_probs=59.3

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADV  203 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~de  203 (277)
                      +|++|+..+|      ++|.+++.+|+..+++|..+|++.+....+++.++.+.  .++|+|+++|+.|+|.+.
T Consensus         1 ~v~l~~~~~c------~~c~~~~~~l~~~~i~~~~~~i~~~~~~~~~~~~~~~~--~~vP~i~~~~~~i~g~~~   66 (73)
T cd02976           1 EVTVYTKPDC------PYCKATKRFLDERGIPFEEVDVDEDPEALEELKKLNGY--RSVPVVVIGDEHLSGFRP   66 (73)
T ss_pred             CEEEEeCCCC------hhHHHHHHHHHHCCCCeEEEeCCCCHHHHHHHHHHcCC--cccCEEEECCEEEecCCH
Confidence            4899999865      79999999999999999999999888888888888764  799999999999999875

In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou

>TIGR02200 GlrX_actino Glutaredoxin-like protein

Probab=98.81  E-value=4.7e-08  Score=71.35  Aligned_cols=65  Identities=22%  Similarity=0.268  Sum_probs=55.6

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHh-CCCCCCCcEEEe-CCEEEechh
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVF-GGKNVTLPQVFI-RGKHVGNAD  202 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~l-G~~~~tvPqVFI-~G~~IGG~d  202 (277)
                      +|+||++++|      ++|++++.+|+.++++|+.+|++.++...++++++. |.  .++|+|++ +|..+....
T Consensus         1 ~v~ly~~~~C------~~C~~~~~~L~~~~~~~~~idi~~~~~~~~~~~~~~~~~--~~vP~i~~~~g~~l~~~~   67 (77)
T TIGR02200         1 TITVYGTTWC------GYCAQLMRTLDKLGAAYEWVDIEEDEGAADRVVSVNNGN--MTVPTVKFADGSFLTNPS   67 (77)
T ss_pred             CEEEEECCCC------hhHHHHHHHHHHcCCceEEEeCcCCHhHHHHHHHHhCCC--ceeCEEEECCCeEecCCC
Confidence            4899999975      799999999999999999999999888888888886 54  79999976 667776654

This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.

>KOG4023 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.64  E-value=7.6e-08  Score=78.19  Aligned_cols=94  Identities=18%  Similarity=0.186  Sum_probs=80.9

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhC------CCCCCCcEEEeCCEEEechhH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG------GKNVTLPQVFIRGKHVGNADV  203 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG------~~~~tvPqVFI~G~~IGG~de  203 (277)
                      .|.||+++..|.+.+-..-.++..+|+...|.|+++||.+..+.++++.....      .+....||||-+++|.||||.
T Consensus         3 ~irvyvasssg~~eik~kqqevv~~Ld~~ki~fk~~di~~~e~~~~~~~~~~~~e~r~~~GnplPPqifn~d~Y~Gdye~   82 (108)
T KOG4023|consen    3 VIRVYVASSSGSTEIKKKQQEVVRFLDANKIGFKEIDITAYEEVRQWMDNNVPDEKRPLNGNPLPPQIFNGDQYCGDYEL   82 (108)
T ss_pred             ceEEEEecCCCchHHHhhhhhhhhhhhcccCCcceeeccchhhhHHHHHhcCChhhcCCCCCCCCcccccCccccccHHH
Confidence            48899999999888888889999999999999999999988777666554431      113789999999999999999


Q ss_pred             HHHHHhhccHHHHhcCCCCC
Q 048504          204 LKSMYETGELARVLDGFPRR  223 (277)
Q Consensus       204 l~~L~EsGeL~klL~~~~~~  223 (277)
                      +.+..|...|...|..+|..
T Consensus        83 F~ea~E~ntl~eFL~lap~~  102 (108)
T KOG4023|consen   83 FFEAVEQNTLQEFLGLAPPP  102 (108)
T ss_pred             HHHHHHHHHHHHHHccCCCc
Confidence            99999999999999988764

>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)

Probab=98.61  E-value=1.4e-07  Score=68.18  Aligned_cols=59  Identities=17%  Similarity=0.209  Sum_probs=49.1

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEec
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGN  200 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG  200 (277)
                      +|++|++++|      ++|.+++.+|+.+     +|.|..+|++.++    ++.+.+|.  .++|+|+|+|++++-
T Consensus         2 ~v~~f~~~~C------~~C~~~~~~l~~l~~~~~~i~~~~id~~~~~----~l~~~~~i--~~vPti~i~~~~~~~   65 (67)
T cd02973           2 NIEVFVSPTC------PYCPDAVQAANRIAALNPNISAEMIDAAEFP----DLADEYGV--MSVPAIVINGKVEFV   65 (67)
T ss_pred             EEEEEECCCC------CCcHHHHHHHHHHHHhCCceEEEEEEcccCH----hHHHHcCC--cccCEEEECCEEEEe
Confidence            5899999975      7999999999875     6999999998774    45666765  789999999998863

All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri

>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins

Probab=98.48  E-value=1.3e-06  Score=65.37  Aligned_cols=71  Identities=14%  Similarity=0.075  Sum_probs=57.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEechhHHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVGNADVLKSMY  208 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IGG~del~~L~  208 (277)
                      ++||+.+.|      ++|.+|+.+|+.+||+|+++|+..+....+++.+..+.  .++|.+..  +|..+.+...+.+..
T Consensus         2 ~~Ly~~~~s------p~~~kv~~~L~~~gi~y~~~~v~~~~~~~~~~~~~~p~--~~vP~l~~~~~~~~l~es~~I~~yL   73 (77)
T cd03041           2 LELYEFEGS------PFCRLVREVLTELELDVILYPCPKGSPKRDKFLEKGGK--VQVPYLVDPNTGVQMFESADIVKYL   73 (77)
T ss_pred             ceEecCCCC------chHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHhCCC--CcccEEEeCCCCeEEEcHHHHHHHH
Confidence            679998864      79999999999999999999998776567788877654  78999976  367778777776644


Q ss_pred             h
Q 048504          209 E  209 (277)
Q Consensus       209 E  209 (277)
                      +
T Consensus        74 ~   74 (77)
T cd03041          74 F   74 (77)
T ss_pred             H
Confidence            3

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.

>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2

Probab=98.32  E-value=5.7e-06  Score=61.22  Aligned_cols=68  Identities=18%  Similarity=0.226  Sum_probs=53.3

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeC----CEEEechhHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIR----GKHVGNADVLK  205 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~----G~~IGG~del~  205 (277)
                      +|.||+...      |++|++|+.+|+.+||+|++++++.  ..+.++ +..+.  .++|+++++    |..|.....+.
T Consensus         1 ~i~Ly~~~~------~p~c~kv~~~L~~~gi~y~~~~~~~--~~~~~~-~~~~~--~~vP~l~~~~~~~~~~l~eS~~I~   69 (77)
T cd03040           1 KITLYQYKT------CPFCCKVRAFLDYHGIPYEVVEVNP--VSRKEI-KWSSY--KKVPILRVESGGDGQQLVDSSVII   69 (77)
T ss_pred             CEEEEEcCC------CHHHHHHHHHHHHCCCceEEEECCc--hhHHHH-HHhCC--CccCEEEECCCCCccEEEcHHHHH
Confidence            588999975      5899999999999999999999854  334555 34444  789999987    77888877777


Q ss_pred             HHH
Q 048504          206 SMY  208 (277)
Q Consensus       206 ~L~  208 (277)
                      +..
T Consensus        70 ~yL   72 (77)
T cd03040          70 STL   72 (77)
T ss_pred             HHH
Confidence            643

Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.

>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=98.30  E-value=2.5e-06  Score=59.03  Aligned_cols=68  Identities=10%  Similarity=0.014  Sum_probs=54.3

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      .||+...      |++|.+++.+|+.++|+|+.++++.+.....++++..+.  .++|.|+++|..+++...+.+.
T Consensus         2 ~ly~~~~------~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~P~l~~~~~~~~es~~I~~y   69 (71)
T cd00570           2 KLYYFPG------SPRSLRVRLALEEKGLPYELVPVDLGEGEQEEFLALNPL--GKVPVLEDGGLVLTESLAILEY   69 (71)
T ss_pred             EEEeCCC------CccHHHHHHHHHHcCCCcEEEEeCCCCCCCHHHHhcCCC--CCCCEEEECCEEEEcHHHHHHH
Confidence            5777765      579999999999999999988887654333356776655  7999999999999998876653

In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma

>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E

Probab=98.26  E-value=5.9e-06  Score=60.35  Aligned_cols=67  Identities=15%  Similarity=0.149  Sum_probs=52.5

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeC-CEEEechhHHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIR-GKHVGNADVLKSMY  208 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~-G~~IGG~del~~L~  208 (277)
                      .||+..+      |++|.+||.+|..+||+|+++++..+... .. .+..+.  .++|+|+++ |..+++...+.+..
T Consensus         2 ~Ly~~~~------~p~~~rvr~~L~~~gl~~~~~~~~~~~~~-~~-~~~~~~--~~vP~L~~~~~~~l~es~aI~~yL   69 (71)
T cd03037           2 KLYIYEH------CPFCVKARMIAGLKNIPVEQIILQNDDEA-TP-IRMIGA--KQVPILEKDDGSFMAESLDIVAFI   69 (71)
T ss_pred             ceEecCC------CcHhHHHHHHHHHcCCCeEEEECCCCchH-HH-HHhcCC--CccCEEEeCCCeEeehHHHHHHHH
Confidence            5788775      58999999999999999999988765322 22 344544  689999997 89999998887654

coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.

>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=98.05  E-value=2.8e-05  Score=59.91  Aligned_cols=73  Identities=11%  Similarity=0.066  Sum_probs=57.4

Q ss_pred             CCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeC-CEEEechhHH
Q 048504          126 GTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIR-GKHVGNADVL  204 (277)
Q Consensus       126 ~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~-G~~IGG~del  204 (277)
                      ...+.++||+...      |++|.+++.+|+.+||+|+.++++... ..+++.+..+.  .++|.+.++ |..|.....+
T Consensus        14 ~~~~~~~Ly~~~~------sp~~~kv~~~L~~~gl~~~~~~v~~~~-~~~~~~~~np~--~~vPvL~~~~g~~l~eS~aI   84 (89)
T cd03055          14 PVPGIIRLYSMRF------CPYAQRARLVLAAKNIPHEVININLKD-KPDWFLEKNPQ--GKVPALEIDEGKVVYESLII   84 (89)
T ss_pred             CCCCcEEEEeCCC------CchHHHHHHHHHHcCCCCeEEEeCCCC-CcHHHHhhCCC--CCcCEEEECCCCEEECHHHH
Confidence            3456799999875      589999999999999999998887542 23456676654  689999998 8888887776


Q ss_pred             HHH
Q 048504          205 KSM  207 (277)
Q Consensus       205 ~~L  207 (277)
                      .+.
T Consensus        85 ~~y   87 (89)
T cd03055          85 CEY   87 (89)
T ss_pred             HHh
Confidence            654

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega

>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E

Probab=97.98  E-value=4.2e-05  Score=55.49  Aligned_cols=69  Identities=17%  Similarity=0.102  Sum_probs=53.0

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      ++||+...      |++|.+++.+|+.+||+|++++++.+ ....++++....  .++|.+..+|..+.....+.+..
T Consensus         1 ~~ly~~~~------~~~~~~v~~~l~~~gi~~~~~~v~~~-~~~~~~~~~~p~--~~vP~l~~~~~~l~es~aI~~yL   69 (73)
T cd03059           1 MTLYSGPD------DVYSHRVRIVLAEKGVSVEIIDVDPD-NPPEDLAELNPY--GTVPTLVDRDLVLYESRIIMEYL   69 (73)
T ss_pred             CEEEECCC------ChhHHHHHHHHHHcCCccEEEEcCCC-CCCHHHHhhCCC--CCCCEEEECCEEEEcHHHHHHHH
Confidence            46888875      58999999999999999999888754 223566666544  68999988888777776666543

coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.

>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC

Probab=97.92  E-value=1.4e-05  Score=64.61  Aligned_cols=47  Identities=15%  Similarity=0.143  Sum_probs=41.7

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGG  183 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~  183 (277)
                      |+||+.+.      |++|++|+++|+++||+|+++|+..++..+++|.++++.
T Consensus         1 i~iY~~~~------C~~c~ka~~~L~~~~i~~~~idi~~~~~~~~el~~~~~~   47 (111)
T cd03036           1 LKFYEYPK------CSTCRKAKKWLDEHGVDYTAIDIVEEPPSKEELKKWLEK   47 (111)
T ss_pred             CEEEECCC------CHHHHHHHHHHHHcCCceEEecccCCcccHHHHHHHHHH
Confidence            57999986      589999999999999999999999998888888887653

Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.

>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx

Probab=97.83  E-value=2.2e-05  Score=62.27  Aligned_cols=47  Identities=13%  Similarity=0.080  Sum_probs=41.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGG  183 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~  183 (277)
                      |+||+++.      |++|++|+.+|+++||+|+++|+..++...++|+++++.
T Consensus         1 i~iY~~~~------C~~c~ka~~~L~~~~i~~~~idi~~~~~~~~~l~~~~~~   47 (105)
T cd02977           1 ITIYGNPN------CSTSRKALAWLEEHGIEYEFIDYLKEPPTKEELKELLAK   47 (105)
T ss_pred             CEEEECCC------CHHHHHHHHHHHHcCCCcEEEeeccCCCCHHHHHHHHHh
Confidence            57999986      589999999999999999999999888888888888764

ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.

>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S

Probab=97.83  E-value=6.3e-05  Score=54.12  Aligned_cols=67  Identities=13%  Similarity=0.092  Sum_probs=50.0

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEe-CCEEEechhHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFI-RGKHVGNADVLKS  206 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI-~G~~IGG~del~~  206 (277)
                      .||+...      |++|.+++.+|..++|+|++++++..  .....++.+..+.  .++|.+.+ +|..+.....+.+
T Consensus         2 ~Ly~~~~------s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~--~~vP~l~~~~~~~l~es~aI~~   71 (74)
T cd03051           2 KLYDSPT------APNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPA--GTVPVLELDDGTVITESVAICR   71 (74)
T ss_pred             EEEeCCC------CcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCC--CCCCEEEeCCCCEEecHHHHHH
Confidence            6888875      47999999999999999988877642  2234567777655  68999987 6666666555544

cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.

>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs

Probab=97.81  E-value=9.8e-05  Score=54.07  Aligned_cols=66  Identities=15%  Similarity=0.152  Sum_probs=51.5

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeC-CEEEechhHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIR-GKHVGNADVLKS  206 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~-G~~IGG~del~~  206 (277)
                      +||+..+|      ++|.+++.+|..+|++|+.++++... ..+++.++.+.  .++|.+..+ |..|.....+.+
T Consensus         2 ~ly~~~~~------p~~~rv~~~L~~~gl~~e~~~v~~~~-~~~~~~~~np~--~~vP~L~~~~g~~l~eS~aI~~   68 (71)
T cd03060           2 ILYSFRRC------PYAMRARMALLLAGITVELREVELKN-KPAEMLAASPK--GTVPVLVLGNGTVIEESLDIMR   68 (71)
T ss_pred             EEEecCCC------cHHHHHHHHHHHcCCCcEEEEeCCCC-CCHHHHHHCCC--CCCCEEEECCCcEEecHHHHHH
Confidence            68888765      79999999999999999988887642 23567777655  799999986 888776665543

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r

>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A

Probab=97.80  E-value=0.0001  Score=54.75  Aligned_cols=68  Identities=12%  Similarity=0.062  Sum_probs=56.2

Q ss_pred             EEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHHh
Q 048504          133 VYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYE  209 (277)
Q Consensus       133 LYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~E  209 (277)
                      ||....      |++|++|+.+|+.+||+|+.+++..... ..++.++.+.  .++|.+..||..|.+...+.+..+
T Consensus         1 Ly~~~~------Sp~~~kv~~~l~~~~i~~~~~~v~~~~~-~~~~~~~~p~--~~vPvL~~~g~~l~dS~~I~~yL~   68 (75)
T PF13417_consen    1 LYGFPG------SPYSQKVRLALEEKGIPYELVPVDPEEK-RPEFLKLNPK--GKVPVLVDDGEVLTDSAAIIEYLE   68 (75)
T ss_dssp             EEEETT------SHHHHHHHHHHHHHTEEEEEEEEBTTST-SHHHHHHSTT--SBSSEEEETTEEEESHHHHHHHHH
T ss_pred             CCCcCC------ChHHHHHHHHHHHcCCeEEEeccCcccc-hhHHHhhccc--ccceEEEECCEEEeCHHHHHHHHH
Confidence            567765      5899999999999999999999876533 6777777765  799999999999999988877543

...

>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1

Probab=97.79  E-value=0.00018  Score=52.94  Aligned_cols=55  Identities=18%  Similarity=0.326  Sum_probs=42.7

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh----CC--CeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCE
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG----FR--VWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGK  196 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~----~g--V~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~  196 (277)
                      +|+||+.++|      ++|..++.+|+.    ++  +.+..+|+..+++    +.+..|-  ..+|+++++|+
T Consensus         2 ~v~~f~~~~C------~~C~~~~~~l~~l~~~~~~~~~~~~vd~~~~~~----~~~~~~v--~~vPt~~~~g~   62 (82)
T TIGR00411         2 KIELFTSPTC------PYCPAAKRVVEEVAKEMGDAVEVEYINVMENPQ----KAMEYGI--MAVPAIVINGD   62 (82)
T ss_pred             EEEEEECCCC------cchHHHHHHHHHHHHHhcCceEEEEEeCccCHH----HHHHcCC--ccCCEEEECCE
Confidence            5889999876      799999999864    33  6778899887653    3444654  78999999997

This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.

>PRK01655 spxA transcriptional regulator Spx; Reviewed

Probab=97.72  E-value=7.6e-05  Score=62.40  Aligned_cols=45  Identities=9%  Similarity=0.248  Sum_probs=40.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHh
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVF  181 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~l  181 (277)
                      |+||+++.      |++|++|+.+|+.+||+|+++|+..++..+++|.+++
T Consensus         2 i~iY~~~~------C~~C~ka~~~L~~~gi~~~~idi~~~~~~~~eL~~~l   46 (131)
T PRK01655          2 VTLFTSPS------CTSCRKAKAWLEEHDIPFTERNIFSSPLTIDEIKQIL   46 (131)
T ss_pred             EEEEeCCC------ChHHHHHHHHHHHcCCCcEEeeccCChhhHHHHHHHH
Confidence            78999986      5899999999999999999999999988888887765

>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=97.71  E-value=0.00017  Score=52.48  Aligned_cols=68  Identities=16%  Similarity=0.202  Sum_probs=52.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCC--CHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSM--DSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~--d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      +.||+...|      ++|++++.+|+.+|++|++++++.  .....+++.+....  .++|.+.++|..|-....+.+
T Consensus         1 ~~Ly~~~~~------~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~--~~vP~l~~~~~~l~es~aI~~   70 (74)
T cd03045           1 IDLYYLPGS------PPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQ--HTVPTLVDNGFVLWESHAILI   70 (74)
T ss_pred             CEEEeCCCC------CcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcC--CCCCEEEECCEEEEcHHHHHH
Confidence            368888764      799999999999999999888764  33345777777654  689999888877766665554

GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.

>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors

Probab=97.66  E-value=0.00052  Score=52.38  Aligned_cols=53  Identities=21%  Similarity=0.349  Sum_probs=43.1

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhC----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCC
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGF----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRG  195 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G  195 (277)
                      +|++|++..      |.-|..|+.+|+..    ++.++++||..|++    |.++.|.   .+|+|.++|
T Consensus         1 ~l~l~~k~~------C~LC~~a~~~L~~~~~~~~~~l~~vDI~~d~~----l~~~Y~~---~IPVl~~~~   57 (81)
T PF05768_consen    1 TLTLYTKPG------CHLCDEAKEILEEVAAEFPFELEEVDIDEDPE----LFEKYGY---RIPVLHIDG   57 (81)
T ss_dssp             -EEEEE-SS------SHHHHHHHHHHHHCCTTSTCEEEEEETTTTHH----HHHHSCT---STSEEEETT
T ss_pred             CEEEEcCCC------CChHHHHHHHHHHHHhhcCceEEEEECCCCHH----HHHHhcC---CCCEEEEcC
Confidence            589999985      58999999999964    47799999998865    6667764   799999999

Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.

>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs

Probab=97.65  E-value=0.00028  Score=50.88  Aligned_cols=67  Identities=15%  Similarity=0.262  Sum_probs=52.0

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      +||+...      |++|.+++.+|+.+|++|++++++..  ....+++.+....  .++|.+..+|..|.....+.+
T Consensus         2 ~Ly~~~~------~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~--~~vP~l~~~~~~i~es~aI~~   70 (73)
T cd03056           2 KLYGFPL------SGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPN--GEVPVLELDGRVLAESNAILV   70 (73)
T ss_pred             EEEeCCC------CccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCC--CCCCEEEECCEEEEcHHHHHH
Confidence            6788875      47999999999999999999888743  2344666666544  689999999988877666654

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.

>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins

Probab=97.51  E-value=0.00072  Score=49.45  Aligned_cols=61  Identities=13%  Similarity=0.123  Sum_probs=49.1

Q ss_pred             CCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHHh
Q 048504          139 RGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYE  209 (277)
Q Consensus       139 cgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~E  209 (277)
                      .++.-.+++|.+++.+|+.+||+|+.+++....        ...  ...+|.+.++|+.+.+...+.+..+
T Consensus        10 ~~~~s~sp~~~~v~~~L~~~~i~~~~~~~~~~~--------~~p--~g~vP~l~~~g~~l~es~~I~~yL~   70 (72)
T cd03054          10 FGLPSLSPECLKVETYLRMAGIPYEVVFSSNPW--------RSP--TGKLPFLELNGEKIADSEKIIEYLK   70 (72)
T ss_pred             CCCCCCCHHHHHHHHHHHhCCCceEEEecCCcc--------cCC--CcccCEEEECCEEEcCHHHHHHHHh
Confidence            345567899999999999999999999987642        222  2689999999999999888776543

Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.

>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family

Probab=97.51  E-value=0.00023  Score=57.88  Aligned_cols=46  Identities=20%  Similarity=0.222  Sum_probs=40.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG  182 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG  182 (277)
                      |.||+.+.      |++|++|+++|+.+||+|+++|+..++..+++|.+++.
T Consensus         1 i~iY~~~~------C~~c~ka~~~L~~~~i~~~~idi~~~~~~~~el~~l~~   46 (117)
T TIGR01617         1 IKVYGSPN------CTTCKKARRWLEANGIEYQFIDIGEDGPTREELLDILS   46 (117)
T ss_pred             CEEEeCCC------CHHHHHHHHHHHHcCCceEEEecCCChhhHHHHHHHHH
Confidence            57899875      58999999999999999999999999888888887764

This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.

>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes

Probab=97.46  E-value=0.00031  Score=57.00  Aligned_cols=46  Identities=17%  Similarity=0.333  Sum_probs=40.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG  182 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG  182 (277)
                      |.||+.+.      |+.|++|+++|+.+||+|+++|+..++.-+++|++.+.
T Consensus         2 i~iY~~~~------C~~c~ka~~~L~~~gi~~~~idi~~~~~~~~el~~~~~   47 (115)
T cd03032           2 IKLYTSPS------CSSCRKAKQWLEEHQIPFEERNLFKQPLTKEELKEILS   47 (115)
T ss_pred             EEEEeCCC------CHHHHHHHHHHHHCCCceEEEecCCCcchHHHHHHHHH
Confidence            78999985      58999999999999999999999988777788877764

It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.

>PRK13344 spxA transcriptional regulator Spx; Reviewed

Probab=97.40  E-value=0.00029  Score=59.14  Aligned_cols=45  Identities=16%  Similarity=0.338  Sum_probs=39.0

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHh
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVF  181 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~l  181 (277)
                      |+||+.+.      |+.|++|+++|+.+||+|+++|+..++--.++|.+++
T Consensus         2 i~iY~~~~------C~~crkA~~~L~~~~i~~~~~d~~~~~~s~~eL~~~l   46 (132)
T PRK13344          2 IKIYTISS------CTSCKKAKTWLNAHQLSYKEQNLGKEPLTKEEILAIL   46 (132)
T ss_pred             EEEEeCCC------CHHHHHHHHHHHHcCCCeEEEECCCCCCCHHHHHHHH
Confidence            78999986      5799999999999999999999998877667776664

>PRK12559 transcriptional regulator Spx; Provisional

Probab=97.38  E-value=0.00033  Score=58.78  Aligned_cols=45  Identities=18%  Similarity=0.346  Sum_probs=39.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHh
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVF  181 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~l  181 (277)
                      |+||+.+.      |+.|++|+++|+.+||+|+++|+..++--.++|.+++
T Consensus         2 i~iY~~~~------C~~crkA~~~L~~~gi~~~~~di~~~~~s~~el~~~l   46 (131)
T PRK12559          2 VVLYTTAS------CASCRKAKAWLEENQIDYTEKNIVSNSMTVDELKSIL   46 (131)
T ss_pred             EEEEeCCC------ChHHHHHHHHHHHcCCCeEEEEeeCCcCCHHHHHHHH
Confidence            78999986      5799999999999999999999998877777777765

>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC

Probab=97.34  E-value=0.0003  Score=56.82  Aligned_cols=46  Identities=15%  Similarity=0.039  Sum_probs=40.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG  182 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG  182 (277)
                      |+||+.+.|      ..|++|+++|+.+||+|+++|+..++--.+||.+++.
T Consensus         1 i~iy~~~~C------~~crka~~~L~~~~i~~~~~di~~~p~s~~eL~~~l~   46 (105)
T cd03035           1 ITLYGIKNC------DTVKKARKWLEARGVAYTFHDYRKDGLDAATLERWLA   46 (105)
T ss_pred             CEEEeCCCC------HHHHHHHHHHHHcCCCeEEEecccCCCCHHHHHHHHH
Confidence            579999865      7999999999999999999999998877778877764

The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.

>PHA02125 thioredoxin-like protein

Probab=97.26  E-value=0.0012  Score=49.27  Aligned_cols=55  Identities=15%  Similarity=0.187  Sum_probs=39.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~I  198 (277)
                      |++|+++||      +.|+.++.+|+...+.|..+|.+.+    .++.+..+-  ..+|.+. +|+.+
T Consensus         2 iv~f~a~wC------~~Ck~~~~~l~~~~~~~~~vd~~~~----~~l~~~~~v--~~~PT~~-~g~~~   56 (75)
T PHA02125          2 IYLFGAEWC------ANCKMVKPMLANVEYTYVDVDTDEG----VELTAKHHI--RSLPTLV-NTSTL   56 (75)
T ss_pred             EEEEECCCC------HhHHHHHHHHHHHhheEEeeeCCCC----HHHHHHcCC--ceeCeEE-CCEEE
Confidence            789999986      6999999999876555555555443    356666764  7899976 66543

>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins

Probab=97.23  E-value=0.0022  Score=46.92  Aligned_cols=70  Identities=9%  Similarity=-0.053  Sum_probs=53.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      +.+|+...      +++|.+++.+|..+|++|+.+.++...  ...+++++....  ..+|.+..+|..|.....+.+..
T Consensus         2 ~~Ly~~~~------s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~--~~vP~l~~~g~~l~es~aI~~yL   73 (76)
T cd03053           2 LKLYGAAM------STCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPF--GQIPALEDGDLKLFESRAITRYL   73 (76)
T ss_pred             eEEEeCCC------ChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCC--CCCCEEEECCEEEEcHHHHHHHH
Confidence            57888765      479999999999999999988776532  223566666654  78999998888887777766644

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t

>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides

Probab=97.21  E-value=0.00093  Score=52.26  Aligned_cols=63  Identities=14%  Similarity=0.179  Sum_probs=47.5

Q ss_pred             CCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEe
Q 048504          125 PGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVG  199 (277)
Q Consensus       125 ~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IG  199 (277)
                      ....-.|.+|++++|      ++|..++.+++..     +|.|..+|++.++    ++.+..|-  ..+|.++|||+.++
T Consensus        10 l~~pv~i~~F~~~~C------~~C~~~~~~~~~l~~~~~~i~~~~vd~~~~~----e~a~~~~V--~~vPt~vidG~~~~   77 (89)
T cd03026          10 LNGPINFETYVSLSC------HNCPDVVQALNLMAVLNPNIEHEMIDGALFQ----DEVEERGI--MSVPAIFLNGELFG   77 (89)
T ss_pred             cCCCEEEEEEECCCC------CCcHHHHHHHHHHHHHCCCceEEEEEhHhCH----HHHHHcCC--ccCCEEEECCEEEE
Confidence            334446999999875      6888888887754     6899999998664    34455654  78999999998765

AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.

>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins

Probab=97.16  E-value=0.0039  Score=49.60  Aligned_cols=76  Identities=14%  Similarity=0.205  Sum_probs=54.8

Q ss_pred             EEEEEecCCC--CCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          131 IVVYLTSLRG--IRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       131 VVLYttSlcg--iR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      +-+|.+...+  -...|++|++++.+|..+||+|+.++|++... -+.+.++.-.  ..+|.+..+|..|.....+.+..
T Consensus         6 ~el~vka~~~~~~~g~cpf~~rvrl~L~eKgi~ye~~~vd~~~~-p~~~~~~nP~--g~vPvL~~~~~~i~eS~~I~eYL   82 (91)
T cd03061           6 IELFVKASSDGESIGNCPFCQRLFMVLWLKGVVFNVTTVDMKRK-PEDLKDLAPG--TQPPFLLYNGEVKTDNNKIEEFL   82 (91)
T ss_pred             EEEEEEeccCCCCCCCChhHHHHHHHHHHCCCceEEEEeCCCCC-CHHHHHhCCC--CCCCEEEECCEEecCHHHHHHHH
Confidence            4455443322  14679999999999999999999888875421 2456676643  67999999999888877777654


Q ss_pred             h
Q 048504          209 E  209 (277)
Q Consensus       209 E  209 (277)
                      +
T Consensus        83 d   83 (91)
T cd03061          83 E   83 (91)
T ss_pred             H
Confidence            3

They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI

>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC

Probab=97.15  E-value=0.00073  Score=55.41  Aligned_cols=47  Identities=17%  Similarity=0.204  Sum_probs=40.6

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhC
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG  182 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG  182 (277)
                      .|+||+.+.      |..|++|+++|+++||+|+++|+..++--.++|++++.
T Consensus         1 ~i~iy~~p~------C~~crkA~~~L~~~gi~~~~~d~~~~p~s~~eL~~~l~   47 (113)
T cd03033           1 DIIFYEKPG------CANNARQKALLEAAGHEVEVRDLLTEPWTAETLRPFFG   47 (113)
T ss_pred             CEEEEECCC------CHHHHHHHHHHHHcCCCcEEeehhcCCCCHHHHHHHHH
Confidence            378999986      57999999999999999999999988777777777764

It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.

>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=97.11  E-value=0.0031  Score=46.23  Aligned_cols=69  Identities=10%  Similarity=0.007  Sum_probs=49.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +.||+...      +++|.+++.+|+.+|++|++++++.. ....++++.... ..++|.+..+|..+.+...+.+.
T Consensus         1 ~~Ly~~~~------sp~~~~v~~~l~~~gl~~~~~~~~~~-~~~~~~~~~~p~-~~~vP~l~~~~~~l~eS~aI~~y   69 (74)
T cd03058           1 VKLLGAWA------SPFVLRVRIALALKGVPYEYVEEDLG-NKSELLLASNPV-HKKIPVLLHNGKPICESLIIVEY   69 (74)
T ss_pred             CEEEECCC------CchHHHHHHHHHHcCCCCEEEEeCcc-cCCHHHHHhCCC-CCCCCEEEECCEEeehHHHHHHH
Confidence            35787764      58999999999999999999887653 122345555421 15799998888777776666554

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,

>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=97.08  E-value=0.0023  Score=46.12  Aligned_cols=68  Identities=12%  Similarity=0.086  Sum_probs=50.1

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +||+...      ++.|.+++.+|+.+||+|+.+.++...  ....++++....  ..+|.+..+|..+.....+.+.
T Consensus         2 ~L~~~~~------~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~--~~vP~l~~~~~~l~es~aI~~y   71 (73)
T cd03042           2 ILYSYFR------SSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQ--GLVPTLVIDGLVLTQSLAIIEY   71 (73)
T ss_pred             EEecCCC------CcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCC--CCCCEEEECCEEEEcHHHHHHH
Confidence            4676654      368899999999999999988776532  233566666644  7899999998888776665543

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.

>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells

Probab=97.08  E-value=0.0024  Score=47.63  Aligned_cols=69  Identities=13%  Similarity=0.105  Sum_probs=52.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +++|....      ++.|++|+.+|+.+|++|+.+.++...  ....++.++...  .++|.+..||..|.....+.+.
T Consensus         1 ~~ly~~~~------s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~--g~vP~L~~~g~~l~Es~aI~~y   71 (73)
T cd03052           1 LVLYHWTQ------SFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPT--GEVPVLIHGDNIICDPTQIIDY   71 (73)
T ss_pred             CEEecCCC------CccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcC--CCCCEEEECCEEEEcHHHHHHH
Confidence            46788764      479999999999999999888776432  233567777765  6899999899887777666543

More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.

>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=97.04  E-value=0.0043  Score=45.83  Aligned_cols=68  Identities=12%  Similarity=0.112  Sum_probs=51.7

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      ++||....+      +.|.+++.+|...|++|+.+.++.+ ...++++.....  .++|.+..+|..|.+...+.+.
T Consensus         2 ~~Ly~~~~~------~~~~~v~~~L~~~~i~~e~~~v~~~-~~~~~~~~~~p~--~~vP~l~~~~~~l~es~aI~~y   69 (73)
T cd03076           2 YTLTYFPVR------GRAEAIRLLLADQGISWEEERVTYE-EWQESLKPKMLF--GQLPCFKDGDLTLVQSNAILRH   69 (73)
T ss_pred             cEEEEeCCc------chHHHHHHHHHHcCCCCEEEEecHH-HhhhhhhccCCC--CCCCEEEECCEEEEcHHHHHHH
Confidence            567877654      5999999999999999999888752 344455555433  6899999999888877776654

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w

>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]

Probab=97.01  E-value=0.0023  Score=61.11  Aligned_cols=83  Identities=19%  Similarity=0.397  Sum_probs=64.1

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH-
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY-  208 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~-  208 (277)
                      +++||.--      |||+|.+||++|+=+||+|..++|+  +-.+++++=-   ....||.+.|+|+.+-+..-+..+. 
T Consensus        90 ~l~LyQye------tCPFCcKVrAFLDyhgisY~VVEVn--pV~r~eIk~S---sykKVPil~~~Geqm~dSsvIIs~la  158 (370)
T KOG3029|consen   90 DLVLYQYE------TCPFCCKVRAFLDYHGISYAVVEVN--PVLRQEIKWS---SYKKVPILLIRGEQMVDSSVIISLLA  158 (370)
T ss_pred             eEEEEeec------cCchHHHHHHHHhhcCCceEEEEec--chhhhhcccc---ccccccEEEeccceechhHHHHHHHH
Confidence            79999874      7899999999999999999999886  4556665432   2378999999999887777776654 


Q ss_pred             ----hh-ccHHHHhcCCCCC
Q 048504          209 ----ET-GELARVLDGFPRR  223 (277)
Q Consensus       209 ----Es-GeL~klL~~~~~~  223 (277)
                          .. -.|.++++-.|..
T Consensus       159 TyLq~~~q~l~eiiq~yPa~  178 (370)
T KOG3029|consen  159 TYLQDKRQDLGEIIQMYPAT  178 (370)
T ss_pred             HHhccCCCCHHHHHHhcccc
Confidence                22 3677788777753

>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha

Probab=96.89  E-value=0.005  Score=44.88  Aligned_cols=68  Identities=13%  Similarity=0.186  Sum_probs=48.7

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +||.-..+      +.|.+++.+|+.+||+|+.++++.......++.....  ..++|.+..+|..|.....+.+.
T Consensus         2 ~Ly~~~~~------~~~~~v~~~l~~~gi~~e~~~~~~~~~~~~~~~~~~p--~~~vP~L~~~~~~l~es~aI~~y   69 (72)
T cd03039           2 KLTYFNIR------GRGEPIRLLLADAGVEYEDVRITYEEWPELDLKPTLP--FGQLPVLEIDGKKLTQSNAILRY   69 (72)
T ss_pred             EEEEEcCc------chHHHHHHHHHHCCCCcEEEEeCHHHhhhhhhccCCc--CCCCCEEEECCEEEEecHHHHHH
Confidence            57766554      6999999999999999999988653222223444433  37899999998888776666543

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma

>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2

Probab=96.79  E-value=0.0054  Score=46.14  Aligned_cols=54  Identities=19%  Similarity=0.232  Sum_probs=39.6

Q ss_pred             EEEEEecCCCCCCCChhHHHH----HHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAV----RMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~V----k~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~I  198 (277)
                      |.+|+ +||      +.|+.+    +++++++++.++.++|+. .   +++.+ .|-  .++|.|+|||+.+
T Consensus         3 i~~~a-~~C------~~C~~~~~~~~~~~~e~~~~~~~~~v~~-~---~~a~~-~~v--~~vPti~i~G~~~   60 (76)
T TIGR00412         3 IQIYG-TGC------ANCQMTEKNVKKAVEELGIDAEFEKVTD-M---NEILE-AGV--TATPGVAVDGELV   60 (76)
T ss_pred             EEEEC-CCC------cCHHHHHHHHHHHHHHcCCCeEEEEeCC-H---HHHHH-cCC--CcCCEEEECCEEE
Confidence            56666 775      799998    667778899999888883 2   22332 444  7999999999755

This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.

>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs

Probab=96.77  E-value=0.0058  Score=44.53  Aligned_cols=67  Identities=13%  Similarity=0.025  Sum_probs=48.5

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHh--CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe-CCEEEechhHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRG--FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI-RGKHVGNADVLKSM  207 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~--~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI-~G~~IGG~del~~L  207 (277)
                      .||+...      +++|.+++.+|+.  +|++|+.+.++.. ....++.+....  .++|.+.. ||..|.....+.+.
T Consensus         2 ~Ly~~~~------s~~~~~~~~~l~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~--~~vP~l~~~~g~~l~es~aI~~y   71 (73)
T cd03049           2 KLLYSPT------SPYVRKVRVAAHETGLGDDVELVLVNPW-SDDESLLAVNPL--GKIPALVLDDGEALFDSRVICEY   71 (73)
T ss_pred             EEecCCC------CcHHHHHHHHHHHhCCCCCcEEEEcCcc-cCChHHHHhCCC--CCCCEEEECCCCEEECHHHHHhh
Confidence            5777765      4799999999999  8999999888642 223455566544  78999975 77777776665543

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.

>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs

Probab=96.75  E-value=0.0086  Score=44.58  Aligned_cols=68  Identities=13%  Similarity=0.170  Sum_probs=50.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCC--CHHHHHHHHHHhCCCCCCCcEEEeC---CEEEechhHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSM--DSAYKKELQCVFGGKNVTLPQVFIR---GKHVGNADVLK  205 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~--d~~~reELke~lG~~~~tvPqVFI~---G~~IGG~del~  205 (277)
                      +.||...      . ++|.+++.+|+.+||+|+.+.+..  .....+++.++...  .++|.+..+   |..|.....+.
T Consensus         2 ~~Ly~~~------~-~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~--~~vP~l~~~~~~g~~l~eS~aI~   72 (81)
T cd03048           2 ITLYTHG------T-PNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPN--GRIPAIVDHNGTPLTVFESGAIL   72 (81)
T ss_pred             eEEEeCC------C-CChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcC--CCCCEEEeCCCCceEEEcHHHHH
Confidence            5788765      2 799999999999999998776663  22344667776644  689999887   77777766665


Q ss_pred             HH
Q 048504          206 SM  207 (277)
Q Consensus       206 ~L  207 (277)
                      +.
T Consensus        73 ~y   74 (81)
T cd03048          73 LY   74 (81)
T ss_pred             HH
Confidence            54

Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and

>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs

Probab=96.71  E-value=0.013  Score=43.35  Aligned_cols=68  Identities=13%  Similarity=0.197  Sum_probs=51.0

Q ss_pred             EEEEEecCC-CCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          131 IVVYLTSLR-GIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       131 VVLYttSlc-giR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      ++||.-..+ +++.-+++|.+|+.+|+..|++|+.++++.-        +...  ..++|.+..+|+.|.+...+.+..
T Consensus         2 ~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~~~~~--------~~~p--~g~vPvl~~~g~~l~eS~~I~~yL   70 (75)
T cd03080           2 ITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYENKFGGLA--------KRSP--KGKLPFIELNGEKIADSELIIDHL   70 (75)
T ss_pred             EEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEEeecCcc--------cCCC--CCCCCEEEECCEEEcCHHHHHHHH
Confidence            466766533 3344579999999999999999998887641        2332  268999999999998888777643

Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=96.67  E-value=0.002  Score=53.32  Aligned_cols=51  Identities=27%  Similarity=0.617  Sum_probs=40.7

Q ss_pred             CCCCCCCCCccceEeCCCCCCcceeeeCCCC---cceeCCCCCcCceeeCCCCC
Q 048504          225 PGFVCGSCGDVRFVPCGNCSGSRKVFDEADG---VPKRCLECNENGLIRCPDCC  275 (277)
Q Consensus       225 ~~~~C~~CGg~rfVpC~~C~GS~Kv~~~~~~---~~~rC~~CNEnGLvrCp~C~  275 (277)
                      ....|..|.|.+..+|+.|+|+-.+.....+   ...+|+.|+-.|.+.|+.|.
T Consensus        40 ~~v~C~~C~GsG~~~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~~C~~C~   93 (111)
T PLN03165         40 NTQPCFPCSGTGAQVCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSLTCTTCQ   93 (111)
T ss_pred             cCCCCCCCCCCCCcCCCCCcCcCeEEEEeCCcEEEEEECCCCCCcceeeCCCCC
Confidence            4468999998888899999999766432211   26799999999999999995

>PRK10387 glutaredoxin 2; Provisional

Probab=96.66  E-value=0.0088  Score=51.54  Aligned_cols=69  Identities=16%  Similarity=0.164  Sum_probs=51.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE-EeCCEEEechhHHHHHHh
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV-FIRGKHVGNADVLKSMYE  209 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV-FI~G~~IGG~del~~L~E  209 (277)
                      +.||+...      +|+|.+|+.+|+.+||+|+.+++..+.. ... .+..+.  .++|.| ..+|..|.+...+.+..+
T Consensus         1 ~~Ly~~~~------sp~~~kv~~~L~~~gi~y~~~~~~~~~~-~~~-~~~~p~--~~VPvL~~~~g~~l~eS~aI~~yL~   70 (210)
T PRK10387          1 MKLYIYDH------CPFCVKARMIFGLKNIPVELIVLANDDE-ATP-IRMIGQ--KQVPILQKDDGSYMPESLDIVHYID   70 (210)
T ss_pred             CEEEeCCC------CchHHHHHHHHHHcCCCeEEEEcCCCch-hhH-HHhcCC--cccceEEecCCeEecCHHHHHHHHH
Confidence            46888765      5899999999999999999998865432 222 334443  689999 568888888888777544

>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor

Probab=96.63  E-value=0.0061  Score=45.89  Aligned_cols=65  Identities=15%  Similarity=0.172  Sum_probs=47.4

Q ss_pred             CCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeC-CEEEechhHHHHHH
Q 048504          141 IRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIR-GKHVGNADVLKSMY  208 (277)
Q Consensus       141 iR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~-G~~IGG~del~~L~  208 (277)
                      .+..+++|.+++.+|..+||+|+.+.++...  ....++ ...+.  ..+|.+..+ |..|.+...+.+..
T Consensus        12 ~~~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~--~~vP~L~~~~~~~l~eS~aI~~yL   79 (84)
T cd03038          12 VRAFSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-TSGGF--YTVPVIVDGSGEVIGDSFAIAEYL   79 (84)
T ss_pred             CCCcCChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-cCCCC--ceeCeEEECCCCEEeCHHHHHHHH
Confidence            4567899999999999999999988776431  222333 33333  689999888 88888887777654

This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.

>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B

Probab=96.59  E-value=0.023  Score=42.62  Aligned_cols=47  Identities=21%  Similarity=0.355  Sum_probs=34.2

Q ss_pred             CChhHHHHHHH----HHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEE
Q 048504          144 TFEDCYAVRMI----FRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKH  197 (277)
Q Consensus       144 Tc~~C~~Vk~i----L~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~  197 (277)
                      +|++|..+.++    +..+++.++.+|+. +   .+++ ...|-  .++|.++|||+.
T Consensus         9 ~C~~C~~~~~~~~~~~~~~~i~~ei~~~~-~---~~~~-~~ygv--~~vPalvIng~~   59 (76)
T PF13192_consen    9 GCPYCPELVQLLKEAAEELGIEVEIIDIE-D---FEEI-EKYGV--MSVPALVINGKV   59 (76)
T ss_dssp             SCTTHHHHHHHHHHHHHHTTEEEEEEETT-T---HHHH-HHTT---SSSSEEEETTEE
T ss_pred             CCCCcHHHHHHHHHHHHhcCCeEEEEEcc-C---HHHH-HHcCC--CCCCEEEECCEE
Confidence            46899966664    45689999999983 3   2344 55554  899999999984

...

>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]

Probab=96.58  E-value=0.0034  Score=52.01  Aligned_cols=46  Identities=13%  Similarity=0.114  Sum_probs=39.7

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHh
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVF  181 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~l  181 (277)
                      .|+||..+-|      .-|++|+++|+++||+|.++|+..++--+++|.+++
T Consensus         2 ~itiy~~p~C------~t~rka~~~L~~~gi~~~~~~y~~~~~s~~eL~~~l   47 (117)
T COG1393           2 MITIYGNPNC------STCRKALAWLEEHGIEYTFIDYLKTPPSREELKKIL   47 (117)
T ss_pred             eEEEEeCCCC------hHHHHHHHHHHHcCCCcEEEEeecCCCCHHHHHHHH
Confidence            3899999876      599999999999999999999998776677777665

>TIGR02182 GRXB Glutaredoxin, GrxB family

Probab=96.54  E-value=0.0094  Score=52.45  Aligned_cols=67  Identities=16%  Similarity=0.248  Sum_probs=50.4

Q ss_pred             EEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE-eCCEEEechhHHHHHHh
Q 048504          133 VYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF-IRGKHVGNADVLKSMYE  209 (277)
Q Consensus       133 LYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF-I~G~~IGG~del~~L~E  209 (277)
                      ||+...      ||+|.+|+.+|..+|++|+.+++..+.. .. ..+..+.  .++|++. .||..|.+...+.+..+
T Consensus         2 Ly~~~~------sp~~~kvr~~L~~~gl~~e~~~~~~~~~-~~-~~~~np~--g~vP~l~~~~g~~l~es~~I~~yL~   69 (209)
T TIGR02182         2 LYIYDH------CPFCVRARMIFGLKNIPVEKHVLLNDDE-ET-PIRMIGA--KQVPILQKDDGRAMPESLDIVAYFD   69 (209)
T ss_pred             eecCCC------CChHHHHHHHHHHcCCCeEEEECCCCcc-hh-HHHhcCC--CCcceEEeeCCeEeccHHHHHHHHH
Confidence            566654      5899999999999999999998865432 12 2344433  6899997 78899999888877544

This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.

>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding

Probab=96.53  E-value=0.013  Score=47.29  Aligned_cols=55  Identities=15%  Similarity=0.259  Sum_probs=41.1

Q ss_pred             CCCcEEEEE-ecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe
Q 048504          127 TEDRIVVYL-TSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI  193 (277)
Q Consensus       127 ~~~kVVLYt-tSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI  193 (277)
                      ....|+||+ ++||      ++|+.++.+|+..     .|.|..+|++.++    ++.+.++-  .++|.++|
T Consensus        21 ~~~~vvv~f~a~wC------~~C~~~~~~l~~la~~~~~i~~~~vd~d~~~----~l~~~~~v--~~vPt~~i   81 (113)
T cd02975          21 NPVDLVVFSSKEGC------QYCEVTKQLLEELSELSDKLKLEIYDFDEDK----EKAEKYGV--ERVPTTIF   81 (113)
T ss_pred             CCeEEEEEeCCCCC------CChHHHHHHHHHHHHhcCceEEEEEeCCcCH----HHHHHcCC--CcCCEEEE
Confidence            344577775 5665      7999999999864     3678899998765    56666765  78999988

PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.

>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli

Probab=96.27  E-value=0.0076  Score=48.87  Aligned_cols=45  Identities=9%  Similarity=0.068  Sum_probs=37.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHh
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVF  181 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~l  181 (277)
                      |+||+.+.      |.-|++|+.+|++++++|+++|+..++--.++|.+++
T Consensus         1 i~iy~~~~------C~t~rkA~~~L~~~~i~~~~~di~~~~~t~~el~~~l   45 (112)
T cd03034           1 ITIYHNPR------CSKSRNALALLEEAGIEPEIVEYLKTPPTAAELRELL   45 (112)
T ss_pred             CEEEECCC------CHHHHHHHHHHHHCCCCeEEEecccCCcCHHHHHHHH
Confidence            57899985      5799999999999999999999987765556665554

E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.

>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase

Probab=96.27  E-value=0.028  Score=41.32  Aligned_cols=68  Identities=9%  Similarity=0.112  Sum_probs=49.0

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +||....+      +.|++++.+|+..|++|+.+.++..  ....+++.+....  ..+|.+..+|..|-....+.+.
T Consensus         2 ~ly~~~~s------~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~--~~vP~L~~~~~~l~eS~aI~~Y   71 (76)
T cd03050           2 KLYYDLMS------QPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPF--GKVPAIVDGDFTLAESVAILRY   71 (76)
T ss_pred             EEeeCCCC------hhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcC--CCCCEEEECCEEEEcHHHHHHH
Confidence            57887654      7999999999999999998777542  2233466666544  7899998888776665555543

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC

>TIGR00014 arsC arsenate reductase (glutaredoxin)

Probab=96.23  E-value=0.0082  Score=48.91  Aligned_cols=46  Identities=11%  Similarity=0.170  Sum_probs=39.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG  182 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG  182 (277)
                      |+||+.+.      |.-|++|+.+|+++|++|+++|+..++--.++|.+++.
T Consensus         1 i~iy~~~~------C~t~rkA~~~L~~~~i~~~~~di~~~p~t~~el~~~l~   46 (114)
T TIGR00014         1 VTIYHNPR------CSKSRNTLALLEDKGIEPEVVKYLKNPPTKSELEAIFA   46 (114)
T ss_pred             CEEEECCC------CHHHHHHHHHHHHCCCCeEEEeccCCCcCHHHHHHHHH
Confidence            57899975      57999999999999999999999988766777777764

composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.

>PRK10853 putative reductase; Provisional

Probab=96.15  E-value=0.0078  Score=49.70  Aligned_cols=46  Identities=13%  Similarity=0.046  Sum_probs=39.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG  182 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG  182 (277)
                      |+||+.+.|      .-|++|+.+|+.+||+|+++|+..++--.++|.+.+.
T Consensus         2 i~iy~~~~C------~t~rkA~~~L~~~~i~~~~~d~~k~p~s~~eL~~~l~   47 (118)
T PRK10853          2 VTLYGIKNC------DTIKKARRWLEAQGIDYRFHDYRVDGLDSELLQGFID   47 (118)
T ss_pred             EEEEcCCCC------HHHHHHHHHHHHcCCCcEEeehccCCcCHHHHHHHHH
Confidence            789999865      6999999999999999999999988766777777764

>PRK10026 arsenate reductase; Provisional

Probab=96.13  E-value=0.0095  Score=51.05  Aligned_cols=48  Identities=10%  Similarity=0.014  Sum_probs=40.6

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhC
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG  182 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG  182 (277)
                      ..|+||+.+.|      .-|++|+++|+++|++|+++|+..++--.++|+.++.
T Consensus         2 ~~i~iY~~p~C------st~RKA~~wL~~~gi~~~~~d~~~~ppt~~eL~~~l~   49 (141)
T PRK10026          2 SNITIYHNPAC------GTSRNTLEMIRNSGTEPTIIHYLETPPTRDELVKLIA   49 (141)
T ss_pred             CEEEEEeCCCC------HHHHHHHHHHHHCCCCcEEEeeeCCCcCHHHHHHHHH
Confidence            35899999865      6999999999999999999999888766677776653

>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs

Probab=96.11  E-value=0.027  Score=41.68  Aligned_cols=65  Identities=9%  Similarity=0.006  Sum_probs=49.4

Q ss_pred             CCCCCChhHHHHHHHHHhCCCeEEEEECCCCH-HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          140 GIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS-AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       140 giR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~-~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      +.+..++++.+++.+|+.+||+|+.+.++... ....++++....  ..+|.+..+|..|.....+.+
T Consensus         5 ~~~~~s~~s~~v~~~L~~~gl~~e~~~v~~~~~~~~~~~~~~nP~--g~vP~L~~~g~~l~eS~aI~~   70 (73)
T cd03043           5 GNKNYSSWSLRPWLLLKAAGIPFEEILVPLYTPDTRARILEFSPT--GKVPVLVDGGIVVWDSLAICE   70 (73)
T ss_pred             cCCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCccccHHHHhhCCC--CcCCEEEECCEEEEcHHHHHH
Confidence            45667899999999999999999988776532 223566666543  789999999988777666554

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.

>TIGR01616 nitro_assoc nitrogenase-associated protein

Probab=96.08  E-value=0.01  Score=49.68  Aligned_cols=46  Identities=13%  Similarity=0.107  Sum_probs=37.4

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHh
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVF  181 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~l  181 (277)
                      .|+||..+.      |.-|++|+++|+.+||+|+++|+..++--.++|.+.+
T Consensus         2 ~i~iY~~p~------Cst~RKA~~~L~~~gi~~~~~d~~~~p~t~~eL~~~l   47 (126)
T TIGR01616         2 TIIFYEKPG------CANNARQKAALKASGHDVEVQDILKEPWHADTLRPYF   47 (126)
T ss_pred             eEEEEeCCC------CHHHHHHHHHHHHCCCCcEEEeccCCCcCHHHHHHHH
Confidence            478999976      4799999999999999999999987755555555544

This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.

>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S

Probab=96.02  E-value=0.033  Score=40.42  Aligned_cols=68  Identities=4%  Similarity=-0.029  Sum_probs=49.4

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      .||+...       ..+.+++.+|+..|++|+.+.++..  .....++++....  ..+|.+..+|..|.....+.+..
T Consensus         2 ~l~~~~~-------~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~--~~vP~l~~~g~~l~es~aI~~yL   71 (76)
T cd03046           2 TLYHLPR-------SRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPL--GKVPVLVDGDLVLTESAAIILYL   71 (76)
T ss_pred             EEEeCCC-------CChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCC--CCCCEEEECCEEEEcHHHHHHHH
Confidence            4666542       3688999999999999998777643  1234556666543  78999999998888877776643

cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb

>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold

Probab=95.98  E-value=0.034  Score=35.90  Aligned_cols=56  Identities=27%  Similarity=0.414  Sum_probs=41.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHH-----hCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFR-----GFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRG  195 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~-----~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G  195 (277)
                      |++|..++      |++|.+++..|+     ..++.|..+|+.......+.+ ...+  ...+|.+++.+
T Consensus         1 l~~~~~~~------c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~P~~~~~~   61 (69)
T cd01659           1 LVLFYAPW------CPFCQALRPVLAELALLNKGVKFEAVDVDEDPALEKEL-KRYG--VGGVPTLVVFG   61 (69)
T ss_pred             CEEEECCC------ChhHHhhhhHHHHHHhhCCCcEEEEEEcCCChHHhhHH-HhCC--CccccEEEEEe
Confidence            45677765      479999999999     678999999998876554441 2233  37899997765

Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.

>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis

Probab=95.92  E-value=0.039  Score=40.68  Aligned_cols=67  Identities=10%  Similarity=-0.053  Sum_probs=48.5

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH-HHHHHHHHHhCCCCCCCcEEEeC-CEEEechhHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS-AYKKELQCVFGGKNVTLPQVFIR-GKHVGNADVLKS  206 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~-~~reELke~lG~~~~tvPqVFI~-G~~IGG~del~~  206 (277)
                      +||+...      ++.|.+++.+|+.+|++|+.++++... ...++++++...  .++|.+..+ |..|-....+.+
T Consensus         2 ~Ly~~~~------~~~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~nP~--~~vP~L~~~~g~~l~es~aI~~   70 (75)
T cd03044           2 TLYTYPG------NPRSLKILAAAKYNGLDVEIVDFQPGKENKTPEFLKKFPL--GKVPAFEGADGFCLFESNAIAY   70 (75)
T ss_pred             eEecCCC------CccHHHHHHHHHHcCCceEEEecccccccCCHHHHHhCCC--CCCCEEEcCCCCEEeeHHHHHH
Confidence            4666654      479999999999999999998887642 223566666644  789999885 766665555544

EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot

>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=95.88  E-value=0.038  Score=40.58  Aligned_cols=67  Identities=7%  Similarity=0.121  Sum_probs=47.0

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeC-CEEEechhHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIR-GKHVGNADVLKSM  207 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~-G~~IGG~del~~L  207 (277)
                      .||+...+       .+.+++.+|..+||+|+.++++...  ...+++.++...  ..+|.+..+ |..+.....+.+.
T Consensus         2 ~Ly~~~~~-------~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~--~~vP~l~~~~g~~l~eS~aI~~y   71 (77)
T cd03057           2 KLYYSPGA-------CSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPK--GQVPALVLDDGEVLTESAAILQY   71 (77)
T ss_pred             EEEeCCCC-------chHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCC--CCCCEEEECCCcEEEcHHHHHHH
Confidence            57776532       4789999999999999887776532  234677777654  789999887 6666665555543

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.

>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B

Probab=95.88  E-value=0.013  Score=43.23  Aligned_cols=63  Identities=11%  Similarity=0.056  Sum_probs=47.2

Q ss_pred             ChhHHHHHHHHHhCCCeEEEEECCC--CH-HHHHHHHHHhCCCCCCCcEEEe-CCEEEechhHHHHHHh
Q 048504          145 FEDCYAVRMIFRGFRVWVDERDVSM--DS-AYKKELQCVFGGKNVTLPQVFI-RGKHVGNADVLKSMYE  209 (277)
Q Consensus       145 c~~C~~Vk~iL~~~gV~y~ErDVs~--d~-~~reELke~lG~~~~tvPqVFI-~G~~IGG~del~~L~E  209 (277)
                      ||++++++-+|+.+|++|+..-+..  +. ....++.++.+.  .++|.+.. +|..|.....+.+..+
T Consensus         2 sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~--~~VP~L~~~~g~vi~eS~~I~~yL~   68 (70)
T PF13409_consen    2 SPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPR--GKVPVLVDPDGTVINESLAILEYLE   68 (70)
T ss_dssp             -HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT---SSSEEEETTTEEEESHHHHHHHHH
T ss_pred             chHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcC--eEEEEEEECCCCEeeCHHHHHHHHh
Confidence            7999999999999999988655522  21 222567788765  78999997 8999998888877544

...

>TIGR00862 O-ClC intracellular chloride channel protein

Probab=95.87  E-value=0.052  Score=49.87  Aligned_cols=76  Identities=13%  Similarity=0.102  Sum_probs=55.6

Q ss_pred             EEEEEecCCC--CCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          131 IVVYLTSLRG--IRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       131 VVLYttSlcg--iR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      |-||.+....  ....||+|++|+.+|..+||+|+.+.|+.... .+++.++...  .++|.+..+|..|.....+.+..
T Consensus         3 ~el~~ka~~~~~~~~~cp~~~rv~i~L~ekgi~~e~~~vd~~~~-~~~fl~inP~--g~vPvL~~~g~~l~ES~aI~eYL   79 (236)
T TIGR00862         3 IELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRK-PEDLQNLAPG--THPPFLTYNTEVKTDVNKIEEFL   79 (236)
T ss_pred             eEEEEecCCCCCcCCCCHhHHHHHHHHHHcCCCcEEEEECCCCC-CHHHHHHCcC--CCCCEEEECCEEeecHHHHHHHH
Confidence            4555554322  22578999999999999999998888765421 3567777644  68999988898888877777654


Q ss_pred             h
Q 048504          209 E  209 (277)
Q Consensus       209 E  209 (277)
                      +
T Consensus        80 ~   80 (236)
T TIGR00862        80 E   80 (236)
T ss_pred             H
Confidence            4

These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.

>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs

Probab=95.79  E-value=0.053  Score=39.60  Aligned_cols=67  Identities=6%  Similarity=-0.027  Sum_probs=48.6

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      .||.....      +.+.+|+.+|+.+|++|+.++++..  ....+++.+....  .++|.+..+|..|.....+.+
T Consensus         2 ~l~~~~~s------~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~--~~vP~L~~~~~~l~eS~aI~~   70 (73)
T cd03047           2 TIWGRRSS------INVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPN--GRVPVLEDGDFVLWESNAILR   70 (73)
T ss_pred             EEEecCCC------cchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCC--CCCCEEEECCEEEECHHHHHH
Confidence            57776643      6899999999999999998877642  2234566666544  689999888877766555543

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.

>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains

Probab=95.68  E-value=0.089  Score=37.70  Aligned_cols=56  Identities=20%  Similarity=0.342  Sum_probs=40.7

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-----CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-----FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-----~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      +++|++++      |+.|..+..+|+.     .++.|..+|++.+..+    .+.++-  ..+|.+++  +|+.+
T Consensus        14 ll~~~~~~------C~~C~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~v--~~~P~~~~~~~g~~~   76 (93)
T cd02947          14 VVDFWAPW------CGPCKAIAPVLEELAEEYPKVKFVKVDVDENPEL----AEEYGV--RSIPTFLFFKNGKEV   76 (93)
T ss_pred             EEEEECCC------ChhHHHhhHHHHHHHHHCCCceEEEEECCCChhH----HHhcCc--ccccEEEEEECCEEE
Confidence            55555554      5799999999987     7888999999876544    334554  67999866  77743

Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio

>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative

Probab=95.67  E-value=0.1  Score=42.96  Aligned_cols=69  Identities=13%  Similarity=0.164  Sum_probs=41.8

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHH----hCCCeEEEEECCCCH--H-----HHHHHHHHhCC--CCCCCcEE--E
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFR----GFRVWVDERDVSMDS--A-----YKKELQCVFGG--KNVTLPQV--F  192 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~----~~gV~y~ErDVs~d~--~-----~reELke~lG~--~~~tvPqV--F  192 (277)
                      ...++||...     .+||+|+.+.-+|+    ..++++..+|++.+.  +     -..++.+..+.  ....+|.+  |
T Consensus        23 ~~~~iv~f~~-----~~Cp~C~~~~P~l~~~~~~~~~~~y~vdvd~~~~~~~~~~~~~~~~~~~~~i~~~i~~~PT~v~~   97 (122)
T TIGR01295        23 KETATFFIGR-----KTCPYCRKFSGTLSGVVAQTKAPIYYIDSENNGSFEMSSLNDLTAFRSRFGIPTSFMGTPTFVHI   97 (122)
T ss_pred             CCcEEEEEEC-----CCChhHHHHhHHHHHHHHhcCCcEEEEECCCccCcCcccHHHHHHHHHHcCCcccCCCCCEEEEE
Confidence            3444555543     35689998666554    456889999998653  1     22344454432  12458988  5


Q ss_pred             eCCEEEech
Q 048504          193 IRGKHVGNA  201 (277)
Q Consensus       193 I~G~~IGG~  201 (277)
                      -+|+.|+..
T Consensus        98 k~Gk~v~~~  106 (122)
T TIGR01295        98 TDGKQVSVR  106 (122)
T ss_pred             eCCeEEEEE
Confidence            688766544

This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.

>PRK09481 sspA stringent starvation protein A; Provisional

Probab=95.66  E-value=0.064  Score=46.92  Aligned_cols=68  Identities=13%  Similarity=0.106  Sum_probs=52.2

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      .+.||+...      |++|.+|+.+|+.+||+|+.+.|+.. ....++.++.-.  .+||.+..+|..|-....+.+
T Consensus        10 ~~~Ly~~~~------s~~~~rv~~~L~e~gl~~e~~~v~~~-~~~~~~~~~nP~--g~VPvL~~~g~~l~ES~AIl~   77 (211)
T PRK09481         10 VMTLFSGPT------DIYSHQVRIVLAEKGVSVEIEQVEKD-NLPQDLIDLNPY--QSVPTLVDRELTLYESRIIME   77 (211)
T ss_pred             eeEEeCCCC------ChhHHHHHHHHHHCCCCCEEEeCCcc-cCCHHHHHhCCC--CCCCEEEECCEEeeCHHHHHH
Confidence            478999865      47999999999999999999888753 233567777543  689999988877666655554

>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=95.64  E-value=0.037  Score=43.50  Aligned_cols=67  Identities=19%  Similarity=0.232  Sum_probs=45.9

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHH----------hCCCCCCCcEEEeC-CEEEec
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCV----------FGGKNVTLPQVFIR-GKHVGN  200 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~----------lG~~~~tvPqVFI~-G~~IGG  200 (277)
                      ++|.+.+      ||+|..+.+.|++++|.|+++||...-...+++..+          -+.+....|.+.++ |+.|=|
T Consensus         5 ~lfgsn~------Cpdca~a~eyl~rl~v~yd~VeIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gyiGIPall~~d~~vVl~   78 (85)
T COG4545           5 KLFGSNL------CPDCAPAVEYLERLNVDYDFVEITESMANLKRFLHLRDSRPEFDEVKSNGYIGIPALLTDDGKVVLG   78 (85)
T ss_pred             eeecccc------CcchHHHHHHHHHcCCCceeeehhhhhhhHHHHHhhhccchhHHhhhhcCcccceEEEeCCCcEEEe
Confidence            7888875      589999999999999999999997654433322222          12234788999765 455544


Q ss_pred             hhHHH
Q 048504          201 ADVLK  205 (277)
Q Consensus       201 ~del~  205 (277)
                       +++.
T Consensus        79 -~Dl~   82 (85)
T COG4545          79 -DDLS   82 (85)
T ss_pred             -chhh
Confidence             4443

>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit

Probab=95.61  E-value=0.021  Score=57.13  Aligned_cols=92  Identities=16%  Similarity=0.177  Sum_probs=59.8

Q ss_pred             chhhhccccccccccCCcccc-c----cccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEE
Q 048504           97 PQQHHLIKLTKPVKSLSLCYN-N----ESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERD  166 (277)
Q Consensus        97 ~~~~~~~~~l~~~~s~~~~~~-~----~~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErD  166 (277)
                      |+-|.-+.-+.++--.+.-++ .    .+.|......-.|.+|.+..      ||+|..|..+++.+     .|..+-+|
T Consensus        82 P~g~Ef~s~i~~i~~~~~~~~~l~~~~~~~~~~~~~~~~i~~f~~~~------Cp~Cp~~v~~~~~~a~~~p~i~~~~id  155 (515)
T TIGR03140        82 PGGHEFTSLVLAILQVGGHGPKLDEGIIDRIRRLNGPLHFETYVSLT------CQNCPDVVQALNQMALLNPNISHTMID  155 (515)
T ss_pred             CCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHhcCCCeEEEEEEeCC------CCCCHHHHHHHHHHHHhCCCceEEEEE
Confidence            344555666655433332222 1    24566666677899999985      68999999888765     46666677


Q ss_pred             CCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEec
Q 048504          167 VSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGN  200 (277)
Q Consensus       167 Vs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG  200 (277)
                      ....+    ++.+..+.  ..||++||||+.++.
T Consensus       156 ~~~~~----~~~~~~~v--~~VP~~~i~~~~~~~  183 (515)
T TIGR03140       156 GALFQ----DEVEALGI--QGVPAVFLNGEEFHN  183 (515)
T ss_pred             chhCH----HHHHhcCC--cccCEEEECCcEEEe
Confidence            66554    34444544  699999999986643

This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.

>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional

Probab=95.55  E-value=0.022  Score=56.88  Aligned_cols=91  Identities=14%  Similarity=0.146  Sum_probs=60.1

Q ss_pred             chhhhccccccccccCCcccc-----ccccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEE
Q 048504           97 PQQHHLIKLTKPVKSLSLCYN-----NESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERD  166 (277)
Q Consensus        97 ~~~~~~~~~l~~~~s~~~~~~-----~~~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErD  166 (277)
                      |+-|.-+.-+.++--.+.-.+     ..+.|......-.|.+|.+..      ||+|..|..+++.+     .|..+-+|
T Consensus        81 P~g~Ef~s~i~~i~~~~~~~~~l~~~~~~~i~~~~~~~~i~~fv~~~------Cp~Cp~~v~~~~~~a~~~~~i~~~~id  154 (517)
T PRK15317         81 PMGHEFTSLVLALLQVGGHPPKLDQEVIEQIKALDGDFHFETYVSLS------CHNCPDVVQALNLMAVLNPNITHTMID  154 (517)
T ss_pred             CccHHHHHHHHHHHHhcCCCCCCCHHHHHHHHhcCCCeEEEEEEcCC------CCCcHHHHHHHHHHHHhCCCceEEEEE
Confidence            334555666555533222111     135566666677899999985      68999998888764     56677787


Q ss_pred             CCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEe
Q 048504          167 VSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVG  199 (277)
Q Consensus       167 Vs~d~~~reELke~lG~~~~tvPqVFI~G~~IG  199 (277)
                      ....++    +.+..+-  ..||++||||+.+.
T Consensus       155 ~~~~~~----~~~~~~v--~~VP~~~i~~~~~~  181 (517)
T PRK15317        155 GALFQD----EVEARNI--MAVPTVFLNGEEFG  181 (517)
T ss_pred             chhCHh----HHHhcCC--cccCEEEECCcEEE
Confidence            776554    4445554  79999999998654

>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD

Probab=95.40  E-value=0.067  Score=41.41  Aligned_cols=54  Identities=15%  Similarity=0.167  Sum_probs=37.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHH----------HhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIF----------RGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI  193 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL----------~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI  193 (277)
                      +|.|+++|      |++|+.....+          .. ++.+..+|++.+.....++.+.++-  .++|.+++
T Consensus        15 lv~f~a~w------C~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~~~i--~~~Pti~~   78 (104)
T cd02953          15 FVDFTADW------CVTCKVNEKVVFSDPEVQAALKK-DVVLLRADWTKNDPEITALLKRFGV--FGPPTYLF   78 (104)
T ss_pred             EEEEEcch------hHHHHHHHHHhcCCHHHHHHHhC-CeEEEEEecCCCCHHHHHHHHHcCC--CCCCEEEE
Confidence            45566665      57999876443          22 6888889998766555677777765  78998843

It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.

>cd02957 Phd_like Phosducin (Phd)-like family; composed of Phd and Phd-like proteins (PhLP), characterized as cytosolic regulators of G protein functions

Probab=94.99  E-value=0.12  Score=41.06  Aligned_cols=66  Identities=12%  Similarity=0.156  Sum_probs=44.6

Q ss_pred             CcEE-EEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEEec
Q 048504          129 DRIV-VYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHVGN  200 (277)
Q Consensus       129 ~kVV-LYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~IGG  200 (277)
                      ..|+ .|+++||      +.|+.+...|+.+     ++.|..+|++.+     +|.+.++-  ..+|.+  |-+|+.++-
T Consensus        25 ~~vvv~F~a~~c------~~C~~l~~~l~~la~~~~~v~f~~vd~~~~-----~l~~~~~i--~~~Pt~~~f~~G~~v~~   91 (113)
T cd02957          25 TRVVVHFYEPGF------PRCKILDSHLEELAAKYPETKFVKINAEKA-----FLVNYLDI--KVLPTLLVYKNGELIDN   91 (113)
T ss_pred             CEEEEEEeCCCC------CcHHHHHHHHHHHHHHCCCcEEEEEEchhh-----HHHHhcCC--CcCCEEEEEECCEEEEE
Confidence            3444 4666665      6999888888752     577888888643     56666654  688977  669988765


Q ss_pred             hhHHHHH
Q 048504          201 ADVLKSM  207 (277)
Q Consensus       201 ~del~~L  207 (277)
                      ..-+..+
T Consensus        92 ~~G~~~~   98 (113)
T cd02957          92 IVGFEEL   98 (113)
T ss_pred             EecHHHh
Confidence            5444443

Phd and PhLPs specifically bind G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane and impeding G protein-mediated signal transduction by inhibiting the formation of a functional G protein trimer (G protein alphabetagamma). Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-te

>TIGR02187 GlrX_arch Glutaredoxin-like domain protein

Probab=94.92  E-value=0.081  Score=47.00  Aligned_cols=57  Identities=18%  Similarity=0.320  Sum_probs=42.1

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCE
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGK  196 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~  196 (277)
                      .-.|++|+++||      ++|..++.+|+.+     .|.+..+|+..+++    +.+.+|-  ..+|+++|+++
T Consensus       134 pv~I~~F~a~~C------~~C~~~~~~l~~l~~~~~~i~~~~vD~~~~~~----~~~~~~V--~~vPtl~i~~~  195 (215)
T TIGR02187       134 PVRIEVFVTPTC------PYCPYAVLMAHKFALANDKILGEMIEANENPD----LAEKYGV--MSVPKIVINKG  195 (215)
T ss_pred             CcEEEEEECCCC------CCcHHHHHHHHHHHHhcCceEEEEEeCCCCHH----HHHHhCC--ccCCEEEEecC
Confidence            335777999876      6999999988864     46777788887654    4455654  78999988753

This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.

>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []

Probab=94.88  E-value=0.068  Score=42.82  Aligned_cols=38  Identities=11%  Similarity=0.104  Sum_probs=27.6

Q ss_pred             CChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHh
Q 048504          144 TFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVF  181 (277)
Q Consensus       144 Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~l  181 (277)
                      .|.-|++|+++|+.+||.|+++|+..++--+++|.+++
T Consensus         5 ~C~t~rka~~~L~~~gi~~~~~d~~k~p~s~~el~~~l   42 (110)
T PF03960_consen    5 NCSTCRKALKWLEENGIEYEFIDYKKEPLSREELRELL   42 (110)
T ss_dssp             T-HHHHHHHHHHHHTT--EEEEETTTS---HHHHHHHH
T ss_pred             CCHHHHHHHHHHHHcCCCeEeehhhhCCCCHHHHHHHH
Confidence            57899999999999999999999998766666666554

This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....

>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains

Probab=94.69  E-value=0.14  Score=39.34  Aligned_cols=57  Identities=21%  Similarity=0.265  Sum_probs=39.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      +++|.+++      |+.|+.+..+|+.      .++.+..+|++.+++    +.+.++-  ..+|.+++  +|+.++
T Consensus        17 lv~f~a~~------C~~C~~~~~~l~~l~~~~~~~v~~~~id~d~~~~----l~~~~~v--~~vPt~~i~~~g~~v~   81 (97)
T cd02949          17 LVLYTSPT------CGPCRTLKPILNKVIDEFDGAVHFVEIDIDEDQE----IAEAAGI--MGTPTVQFFKDKELVK   81 (97)
T ss_pred             EEEEECCC------ChhHHHHHHHHHHHHHHhCCceEEEEEECCCCHH----HHHHCCC--eeccEEEEEECCeEEE
Confidence            44555565      5799999888876      457888999988764    4455554  68898754  776553

The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.

>PHA02278 thioredoxin-like protein

Probab=94.48  E-value=0.17  Score=40.63  Aligned_cols=60  Identities=13%  Similarity=0.240  Sum_probs=40.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~I  198 (277)
                      ||-|+++||      ..|+.+.-+|+..      .+++..+|++.++....++.+.++-  .++|++  |=||+.+
T Consensus        18 vV~F~A~WC------gpCk~m~p~l~~l~~~~~~~~~~~~vdvd~~~~d~~~l~~~~~I--~~iPT~i~fk~G~~v   85 (103)
T PHA02278         18 IVMITQDNC------GKCEILKSVIPMFQESGDIKKPILTLNLDAEDVDREKAVKLFDI--MSTPVLIGYKDGQLV   85 (103)
T ss_pred             EEEEECCCC------HHHHhHHHHHHHHHhhhcCCceEEEEECCccccccHHHHHHCCC--ccccEEEEEECCEEE
Confidence            445556665      6999888777553      3568889998763224456777754  788887  4588755

>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=94.45  E-value=0.38  Score=36.10  Aligned_cols=70  Identities=14%  Similarity=0.072  Sum_probs=46.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      ++||....+      ..|.+++.+|+..|++|+.+.++...++. ++..-.......+|.+.+||..|.....+...
T Consensus         2 ~~Ly~~~~~------~~~~~v~~~l~~~gi~~e~~~v~~~~~~~-~~~~~~~~~~g~vP~L~~~g~~l~ES~AI~~Y   71 (79)
T cd03077           2 PVLHYFNGR------GRMESIRWLLAAAGVEFEEKFIESAEDLE-KLKKDGSLMFQQVPMVEIDGMKLVQTRAILNY   71 (79)
T ss_pred             CEEEEeCCC------ChHHHHHHHHHHcCCCcEEEEeccHHHHH-hhccccCCCCCCCCEEEECCEEEeeHHHHHHH
Confidence            467887654      48899999999999999988776533321 11110000125799999899877766665543

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the

>PRK15113 glutathione S-transferase; Provisional

Probab=93.97  E-value=0.27  Score=43.10  Aligned_cols=71  Identities=8%  Similarity=0.033  Sum_probs=50.9

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      .++||....    .++++|.+|+.+|..+||+|+.+.++..  ....+++.++.-.  ..||.+.+||..|-....+.+
T Consensus         5 ~~~Ly~~~~----~~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~--g~VP~L~~~~~~l~ES~aI~~   77 (214)
T PRK15113          5 AITLYSDAH----FFSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLT--RRVPTLQHDDFELSESSAIAE   77 (214)
T ss_pred             eEEEEeCCC----CCCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCC--CCCCEEEECCEEEecHHHHHH
Confidence            378998652    1257999999999999999988777642  2233567776643  689999988876665555544

>PLN02817 glutathione dehydrogenase (ascorbate)

Probab=93.83  E-value=0.19  Score=46.63  Aligned_cols=61  Identities=16%  Similarity=0.148  Sum_probs=45.7

Q ss_pred             CChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          144 TFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       144 Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      .||+|++|+.+|+.+||+|+.+.|+... .-+++.++.-.  ..+|.+..+|..|.....+.+.
T Consensus        72 ~cp~s~rV~i~L~ekgi~ye~~~vdl~~-~~~~fl~iNP~--GkVPvL~~d~~~L~ES~aI~~Y  132 (265)
T PLN02817         72 DCPFCQRVLLTLEEKHLPYDMKLVDLTN-KPEWFLKISPE--GKVPVVKLDEKWVADSDVITQA  132 (265)
T ss_pred             CCcHHHHHHHHHHHcCCCCEEEEeCcCc-CCHHHHhhCCC--CCCCEEEECCEEEecHHHHHHH
Confidence            4789999999999999999977665432 22455666533  6899999999887776666654

>PLN02378 glutathione S-transferase DHAR1

Probab=93.49  E-value=0.23  Score=43.73  Aligned_cols=61  Identities=10%  Similarity=0.017  Sum_probs=45.0

Q ss_pred             CCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          143 RTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       143 ~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      .+||+|++|+.+|+.+|++|+.+.|+... --+++.++...  .++|.+-.+|..|.....+.+
T Consensus        18 ~~~p~~~rv~~~L~e~gl~~e~~~v~~~~-~~~~~l~inP~--G~VPvL~~~~~~l~ES~aI~~   78 (213)
T PLN02378         18 GDCPFSQRALLTLEEKSLTYKIHLINLSD-KPQWFLDISPQ--GKVPVLKIDDKWVTDSDVIVG   78 (213)
T ss_pred             CCCcchHHHHHHHHHcCCCCeEEEeCccc-CCHHHHHhCCC--CCCCEEEECCEEecCHHHHHH
Confidence            46899999999999999999876665432 12356666544  689999888877666555554

>PLN02473 glutathione S-transferase

Probab=93.47  E-value=0.32  Score=42.14  Aligned_cols=69  Identities=13%  Similarity=-0.010  Sum_probs=49.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +.||....      .+.+.+|+-+|..+||+|+.+.++..  .....++.++...  ..+|.+..+|..|.....+.+.
T Consensus         3 ~kLy~~~~------s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~~~g~~l~ES~aI~~Y   73 (214)
T PLN02473          3 VKVYGQIK------AANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPF--GQVPAIEDGDLKLFESRAIARY   73 (214)
T ss_pred             eEEecCCC------CCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCC--CCCCeEEECCEEEEehHHHHHH
Confidence            46787654      46899999999999999987755422  2233455555433  6899999999888887777763

>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms

Probab=93.39  E-value=0.34  Score=36.27  Aligned_cols=61  Identities=26%  Similarity=0.445  Sum_probs=41.5

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEEe
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHVG  199 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~IG  199 (277)
                      ...|+||..+     ..|+.|+.++..|..    +  +|.|..+|++.++    +|.+.++-  ..+|.+  |-+|+.+.
T Consensus        17 ~~~vvv~f~~-----~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----~l~~~~~v--~~~Pt~~~~~~g~~~~   85 (103)
T PF00085_consen   17 DKPVVVYFYA-----PWCPPCKAFKPILEKLAKEYKDNVKFAKVDCDENK----ELCKKYGV--KSVPTIIFFKNGKEVK   85 (103)
T ss_dssp             SSEEEEEEES-----TTSHHHHHHHHHHHHHHHHTTTTSEEEEEETTTSH----HHHHHTTC--SSSSEEEEEETTEEEE
T ss_pred             CCCEEEEEeC-----CCCCccccccceecccccccccccccchhhhhccc----hhhhccCC--CCCCEEEEEECCcEEE
Confidence            3455555544     246899999888754    2  5889999998774    45556654  789988  45776554

Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....

>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif

Probab=93.38  E-value=0.59  Score=37.60  Aligned_cols=60  Identities=20%  Similarity=0.208  Sum_probs=41.8

Q ss_pred             CcEEEEEe-cCCCCCCCChhHHHHHHHHHh-----CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEEec
Q 048504          129 DRIVVYLT-SLRGIRRTFEDCYAVRMIFRG-----FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHVGN  200 (277)
Q Consensus       129 ~kVVLYtt-SlcgiR~Tc~~C~~Vk~iL~~-----~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~IGG  200 (277)
                      ..|+||+. +|      |+.|+.+...|+.     .++.|..+|++..++    +.+..+-  ..+|.+  |-+|+.|+-
T Consensus        23 ~~vvV~f~a~~------c~~C~~~~p~l~~la~~~~~i~f~~Vd~~~~~~----l~~~~~v--~~vPt~l~fk~G~~v~~   90 (113)
T cd02989          23 ERVVCHFYHPE------FFRCKIMDKHLEILAKKHLETKFIKVNAEKAPF----LVEKLNI--KVLPTVILFKNGKTVDR   90 (113)
T ss_pred             CcEEEEEECCC------CccHHHHHHHHHHHHHHcCCCEEEEEEcccCHH----HHHHCCC--ccCCEEEEEECCEEEEE
Confidence            45555554 55      5799988888865     258899999988754    5555654  678887  568876643

The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.

>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit

Probab=93.06  E-value=0.18  Score=51.12  Aligned_cols=66  Identities=17%  Similarity=0.176  Sum_probs=48.5

Q ss_pred             ccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHh----C-CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeC
Q 048504          120 SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRG----F-RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIR  194 (277)
Q Consensus       120 ~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~----~-gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~  194 (277)
                      +.|......-.|.+|.+++      ||+|..+.+.++.    . +|..+.+|+...+    ++.+..+-  ..+|.++||
T Consensus       469 ~~i~~~~~~~~i~v~~~~~------C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~~~~----~~~~~~~v--~~vP~~~i~  536 (555)
T TIGR03143       469 EKIKKITKPVNIKIGVSLS------CTLCPDVVLAAQRIASLNPNVEAEMIDVSHFP----DLKDEYGI--MSVPAIVVD  536 (555)
T ss_pred             HHHHhcCCCeEEEEEECCC------CCCcHHHHHHHHHHHHhCCCceEEEEECcccH----HHHHhCCc--eecCEEEEC
Confidence            4566555666799999885      5788877776554    4 7999999998765    44444554  789999999


Q ss_pred             CEE
Q 048504          195 GKH  197 (277)
Q Consensus       195 G~~  197 (277)
                      |+.
T Consensus       537 ~~~  539 (555)
T TIGR03143       537 DQQ  539 (555)
T ss_pred             CEE
Confidence            963

This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).

>TIGR01262 maiA maleylacetoacetate isomerase

Probab=93.06  E-value=0.22  Score=42.86  Aligned_cols=61  Identities=13%  Similarity=0.079  Sum_probs=45.8

Q ss_pred             ChhHHHHHHHHHhCCCeEEEEECCC-C--HHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          145 FEDCYAVRMIFRGFRVWVDERDVSM-D--SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       145 c~~C~~Vk~iL~~~gV~y~ErDVs~-d--~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      ++.+.+|+.+|..+||+|+.+.++. .  .....++.+....  .++|.+.+||..|-....+.+.
T Consensus         8 s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~--g~vP~L~~~g~~l~ES~aI~~y   71 (210)
T TIGR01262         8 SSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQ--GLVPTLDIDGEVLTQSLAIIEY   71 (210)
T ss_pred             CCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCC--CcCCEEEECCEEeecHHHHHHH
Confidence            4789999999999999999887764 1  1123456666533  7899999999888777766653

Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.

>cd02954 DIM1 Dim1 family; Dim1 is also referred to as U5 small nuclear ribonucleoprotein particle (snRNP)-specific 15kD protein

Probab=93.02  E-value=0.54  Score=38.91  Aligned_cols=57  Identities=14%  Similarity=0.278  Sum_probs=41.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----C-CeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----R-VWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----g-V~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~IG  199 (277)
                      ||-|+.+||      +.|+.+.-+|+.+     + +.|..+|++.++    +|.+..|-  ..+|.+  |-+|+.++
T Consensus        18 VV~F~A~WC------gpCk~m~P~le~la~~~~~~v~f~kVDvD~~~----~la~~~~V--~~iPTf~~fk~G~~v~   82 (114)
T cd02954          18 VIRFGRDWD------PVCMQMDEVLAKIAEDVSNFAVIYLVDIDEVP----DFNKMYEL--YDPPTVMFFFRNKHMK   82 (114)
T ss_pred             EEEEECCCC------hhHHHHHHHHHHHHHHccCceEEEEEECCCCH----HHHHHcCC--CCCCEEEEEECCEEEE
Confidence            445777776      6999998888653     2 578899999876    45566664  679987  56888764

It is a component of U5 snRNP, which pre-assembles with U4/U6 snRNPs to form a [U4/U6:U5] tri-snRNP complex required for pre-mRNA splicing. Dim1 interacts with multiple splicing-associated proteins, suggesting that it functions at multiple control points in the splicing of pre-mRNA as part of a large spliceosomal complex involving many protein-protein interactions. U5 snRNP contains seven core proteins (common to all snRNPs) and nine U5-specific proteins, one of which is Dim1. Dim1 adopts a thioredoxin fold but does not contain the redox active CXXC motif. It is essential for G2/M phase transition, as a consequence to its role in pre-mRNA splicing.

>TIGR01068 thioredoxin thioredoxin

Probab=92.91  E-value=1.1  Score=33.31  Aligned_cols=49  Identities=18%  Similarity=0.395  Sum_probs=34.2

Q ss_pred             CChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          144 TFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       144 Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      .|+.|+.+...|+.    +  .+.|..+|++.+..    +.+.+|-  ..+|.+++  +|+.+
T Consensus        25 ~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v--~~~P~~~~~~~g~~~   81 (101)
T TIGR01068        25 WCGPCKMIAPILEELAKEYEGKVKFVKLNVDENPD----IAAKYGI--RSIPTLLLFKNGKEV   81 (101)
T ss_pred             CCHHHHHhCHHHHHHHHHhcCCeEEEEEECCCCHH----HHHHcCC--CcCCEEEEEeCCcEe
Confidence            35799988777754    2  47888999887754    4455654  68998866  76644

Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model.

>PF13098 Thioredoxin_2: Thioredoxin-like domain; PDB: 1T3B_A 2L57_A 1EEJ_B 1TJD_A 1JZD_B 1JZO_A 1G0T_B 3GV1_A 1V58_A 2H0H_A

Probab=92.84  E-value=0.74  Score=35.63  Aligned_cols=68  Identities=16%  Similarity=0.118  Sum_probs=36.9

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh---------CCCeEEEEECCCCHH----------------HHHHHHHHhCCC
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG---------FRVWVDERDVSMDSA----------------YKKELQCVFGGK  184 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~---------~gV~y~ErDVs~d~~----------------~reELke~lG~~  184 (277)
                      .|++|+..      .|++|+++...+..         .++.+..+++..+..                ...+|.+.+|- 
T Consensus         8 ~v~~F~~~------~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v-   80 (112)
T PF13098_consen    8 IVVVFTDP------WCPYCKKLEKELFPDNDVARYLKDDFQVIFVNIDDSRDESEAVLDFDGQKNVRLSNKELAQRYGV-   80 (112)
T ss_dssp             EEEEEE-T------T-HHHHHHHHHHHHHHHHHCEEHCECEEEECESHSHHHHHHHHHSHTCHSSCHHHHHHHHHHTT--
T ss_pred             EEEEEECC------CCHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccccccccccccchhhhHHHHHHHHHcCC-
Confidence            35555555      46899988666542         145566777765432                12456666764 


Q ss_pred             CCCCcEEE-eC--CE---EEechhHHH
Q 048504          185 NVTLPQVF-IR--GK---HVGNADVLK  205 (277)
Q Consensus       185 ~~tvPqVF-I~--G~---~IGG~del~  205 (277)
                       ...|.++ +|  |+   .+-|+-.-.
T Consensus        81 -~gtPt~~~~d~~G~~v~~~~G~~~~~  106 (112)
T PF13098_consen   81 -NGTPTIVFLDKDGKIVYRIPGYLSPE  106 (112)
T ss_dssp             --SSSEEEECTTTSCEEEEEESS--HH
T ss_pred             -CccCEEEEEcCCCCEEEEecCCCCHH
Confidence             6788884 55  66   455654433

...

>PTZ00051 thioredoxin; Provisional

Probab=92.54  E-value=0.82  Score=34.52  Aligned_cols=57  Identities=19%  Similarity=0.239  Sum_probs=38.0

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-----CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-----FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-----~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~IG  199 (277)
                      |+.|+.+|      |+.|+.+...|+.     .++.|..+|++...    .+.+.++-  ..+|.+  |-+|+.++
T Consensus        22 li~f~~~~------C~~C~~~~~~l~~l~~~~~~~~~~~vd~~~~~----~~~~~~~v--~~~Pt~~~~~~g~~~~   85 (98)
T PTZ00051         22 IVDFYAEW------CGPCKRIAPFYEECSKEYTKMVFVKVDVDELS----EVAEKENI--TSMPTFKVFKNGSVVD   85 (98)
T ss_pred             EEEEECCC------CHHHHHHhHHHHHHHHHcCCcEEEEEECcchH----HHHHHCCC--ceeeEEEEEeCCeEEE
Confidence            44555555      5799999888876     36888888987654    34455554  678876  44775553

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=92.37  E-value=0.085  Score=51.91  Aligned_cols=50  Identities=28%  Similarity=0.637  Sum_probs=39.8

Q ss_pred             CCCCCCCCcc------ceEeCCCCCCcceeeeCC----CCcceeCCCCCcCcee---eCCCCC
Q 048504          226 GFVCGSCGDV------RFVPCGNCSGSRKVFDEA----DGVPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       226 ~~~C~~CGg~------rfVpC~~C~GS~Kv~~~~----~~~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ...|..|.|.      .-+.|+.|+|+-.+....    ......|+.||-.|-+   +|+.|.
T Consensus       142 ~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i~~pC~~C~  204 (371)
T COG0484         142 SVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIKDPCGKCK  204 (371)
T ss_pred             eeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeECCCCCCCCC
Confidence            4689999888      667799999998765433    2347899999999987   599995

>KOG0910 consensus Thioredoxin-like protein [Posttranslational modification, protein turnover, chaperones]

Probab=92.35  E-value=0.18  Score=43.91  Aligned_cols=56  Identities=20%  Similarity=0.321  Sum_probs=42.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~I  198 (277)
                      +|-|...|||      .|+.+.-+|+.+      .|.+..+|++.+.+    |.+..+-  ..+|.|  |-||+-+
T Consensus        65 lVdF~A~WCg------PCk~l~P~l~~~~~~~~g~~k~~kvdtD~~~e----la~~Y~I--~avPtvlvfknGe~~  128 (150)
T KOG0910|consen   65 LVDFHAEWCG------PCKMLGPILEELVSEYAGKFKLYKVDTDEHPE----LAEDYEI--SAVPTVLVFKNGEKV  128 (150)
T ss_pred             EEEEecCcCc------cHhHhhHHHHHHHHhhcCeEEEEEEccccccc----hHhhcce--eeeeEEEEEECCEEe
Confidence            7779999986      999888888764      46678899988864    4555654  678887  6788754

>PRK11752 putative S-transferase; Provisional

Probab=92.31  E-value=0.78  Score=42.13  Aligned_cols=73  Identities=10%  Similarity=0.140  Sum_probs=49.8

Q ss_pred             CCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCC--CHHHHHHHHHHhCCCCCCCcEEEeCC-
Q 048504          125 PGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSM--DSAYKKELQCVFGGKNVTLPQVFIRG-  195 (277)
Q Consensus       125 ~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~--d~~~reELke~lG~~~~tvPqVFI~G-  195 (277)
                      +.+.+.+.||+..       .++|++|+.+|+.+      |++|+.+.|+.  ......++.++.-.  .+||.+..++ 
T Consensus        39 ~~~~~~~~Ly~~~-------s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iNP~--GkVP~Lv~~dg  109 (264)
T PRK11752         39 PVGKHPLQLYSLG-------TPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEINPN--SKIPALLDRSG  109 (264)
T ss_pred             CCCCCCeEEecCC-------CCchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhCCC--CCCCEEEeCCC
Confidence            4456689999854       37999999999986      88888766643  22234566666543  6899997753 


Q ss_pred             ---EEEechhHHHH
Q 048504          196 ---KHVGNADVLKS  206 (277)
Q Consensus       196 ---~~IGG~del~~  206 (277)
                         ..|-....+.+
T Consensus       110 ~~~~~L~ES~AIl~  123 (264)
T PRK11752        110 NPPIRVFESGAILL  123 (264)
T ss_pred             CCCeEEEcHHHHHH
Confidence               45555555554

>TIGR02187 GlrX_arch Glutaredoxin-like domain protein

Probab=92.14  E-value=0.72  Score=40.95  Aligned_cols=63  Identities=19%  Similarity=0.274  Sum_probs=42.3

Q ss_pred             CCCCcEEEEEe---cCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CC
Q 048504          126 GTEDRIVVYLT---SLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RG  195 (277)
Q Consensus       126 ~~~~kVVLYtt---SlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G  195 (277)
                      ...-.|++|++   +||      +.|+.+..+|+..     ++.+..+|++.|.  ..++.+.++-  ..+|.+.+  ||
T Consensus        18 ~~~~~i~~f~~~~a~wC------~~C~~~~p~l~~la~~~~~~~i~~v~vd~~~--~~~l~~~~~V--~~~Pt~~~f~~g   87 (215)
T TIGR02187        18 KNPVEIVVFTDNDKEGC------QYCKETEQLLEELSEVSPKLKLEIYDFDTPE--DKEEAEKYGV--ERVPTTIILEEG   87 (215)
T ss_pred             CCCeEEEEEcCCCCCCC------CchHHHHHHHHHHHhhCCCceEEEEecCCcc--cHHHHHHcCC--CccCEEEEEeCC
Confidence            34456889988   776      6999999888764     3556677777542  2355666664  78999855  55


Q ss_pred             EEE
Q 048504          196 KHV  198 (277)
Q Consensus       196 ~~I  198 (277)
                      +.+
T Consensus        88 ~~~   90 (215)
T TIGR02187        88 KDG   90 (215)
T ss_pred             eee
Confidence            443

This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.

>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation

Probab=92.07  E-value=0.8  Score=36.59  Aligned_cols=57  Identities=16%  Similarity=0.176  Sum_probs=34.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHH---------hCCCeEEEEECCCCHHH---------HHHHHHHhCCCCCCCcEE-
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFR---------GFRVWVDERDVSMDSAY---------KKELQCVFGGKNVTLPQV-  191 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~---------~~gV~y~ErDVs~d~~~---------reELke~lG~~~~tvPqV-  191 (277)
                      +|.|.++|      |++|++....|.         ..++.+..+|++.+...         ..+|....+.  ..+|.+ 
T Consensus        18 lv~f~a~w------C~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~l~~~~~v--~~~Pt~~   89 (125)
T cd02951          18 LLLFSQPG------CPYCDKLKRDYLNDPAVQAYIRAHFVVVYINIDGDKEVTDFDGEALSEKELARKYRV--RFTPTVI   89 (125)
T ss_pred             EEEEeCCC------CHHHHHHHHHhcCcHHHHHHHHhheEEEEEEccCCceeeccCCCCccHHHHHHHcCC--ccccEEE
Confidence            44555555      579998765442         12466677787754211         2466666664  689986 


Q ss_pred             EeCC
Q 048504          192 FIRG  195 (277)
Q Consensus       192 FI~G  195 (277)
                      |+++
T Consensus        90 ~~~~   93 (125)
T cd02951          90 FLDP   93 (125)
T ss_pred             EEcC
Confidence            5654

Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation.

>cd02965 HyaE HyaE family; HyaE is also called HupG and HoxO

Probab=91.98  E-value=0.64  Score=38.38  Aligned_cols=65  Identities=18%  Similarity=0.299  Sum_probs=45.1

Q ss_pred             CCCcEEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEE
Q 048504          127 TEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHV  198 (277)
Q Consensus       127 ~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~I  198 (277)
                      +...|+.|+..|    ..||.|..+.-+|+..      .+.|..+|++.++    +|....+-  .++|.+  |-+|+.+
T Consensus        27 ~~~~v~~f~~~~----~~cp~c~~i~P~leela~e~~~~v~f~kVdid~~~----~la~~f~V--~sIPTli~fkdGk~v   96 (111)
T cd02965          27 GGDLVLLLAGDP----VRFPEVLDVAVVLPELLKAFPGRFRAAVVGRADEQ----ALAARFGV--LRTPALLFFRDGRYV   96 (111)
T ss_pred             CCCEEEEecCCc----ccCcchhhhHhHHHHHHHHCCCcEEEEEEECCCCH----HHHHHcCC--CcCCEEEEEECCEEE
Confidence            344566666654    1378999999888753      2567788888775    56666754  788987  5699887


Q ss_pred             ech
Q 048504          199 GNA  201 (277)
Q Consensus       199 GG~  201 (277)
                      +..
T Consensus        97 ~~~   99 (111)
T cd02965          97 GVL   99 (111)
T ss_pred             EEE
Confidence            654

They are proteins serving a critical role in the assembly of multimeric [NiFe] hydrogenases, the enzymes that catalyze the oxidation of molecular hydrogen to enable microorganisms to utilize hydrogen as the sole energy source. The E. coli HyaE protein is a chaperone that specifically interacts with the twin-arginine translocation (Tat) signal peptide of the [NiFe] hydrogenase-1 beta subunit precursor. Tat signal peptides target precursor proteins to the Tat protein export system, which facilitates the transport of fully folded proteins across the inner membrane. HyaE may be involved in regulating the traffic of [NiFe] hydrogenase-1 on the Tat transport pathway.

>PLN02395 glutathione S-transferase

Probab=91.79  E-value=0.74  Score=39.80  Aligned_cols=69  Identities=10%  Similarity=0.028  Sum_probs=49.9

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      +.||....       ..+.+|+.+|..+|++|+.+.|+..  .....++.+..-.  .++|.+..+|..|-....+.+..
T Consensus         3 ~~ly~~~~-------~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~~~~~~l~ES~aI~~YL   73 (215)
T PLN02395          3 LKVYGPAF-------ASPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPF--GVVPVIVDGDYKIFESRAIMRYY   73 (215)
T ss_pred             EEEEcCCc-------CcHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCC--CCCCEEEECCEEEEcHHHHHHHH
Confidence            67887432       3679999999999999998877642  1223567776543  68999998888777777766643

>PRK09381 trxA thioredoxin; Provisional

Probab=91.74  E-value=1  Score=34.95  Aligned_cols=57  Identities=12%  Similarity=0.330  Sum_probs=38.9

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      |+.|.+++      |+.|..+...|+.    +  ++.+..+|++.++..    .+.++-  .++|.+++  +|+.++
T Consensus        25 vv~f~~~~------C~~C~~~~p~~~~l~~~~~~~~~~~~vd~~~~~~~----~~~~~v--~~~Pt~~~~~~G~~~~   89 (109)
T PRK09381         25 LVDFWAEW------CGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT----APKYGI--RGIPTLLLFKNGEVAA   89 (109)
T ss_pred             EEEEECCC------CHHHHHHhHHHHHHHHHhCCCcEEEEEECCCChhH----HHhCCC--CcCCEEEEEeCCeEEE
Confidence            45555655      5899988777754    2  467888998876543    344554  78998855  888764

>cd02985 TRX_CDSP32 TRX family, chloroplastic drought-induced stress protein of 32 kD (CDSP32); CDSP32 is composed of two TRX domains, a C-terminal TRX domain which contains a redox active CXXC motif and an N-terminal TRX-like domain which contains an SXXS sequence instead of the redox active motif

Probab=91.72  E-value=1.3  Score=34.61  Aligned_cols=60  Identities=8%  Similarity=0.022  Sum_probs=39.8

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE--eCCEEE
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF--IRGKHV  198 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF--I~G~~I  198 (277)
                      -||.|..+||      +.|+.....|+.+     ++.|..+|++.+... .+|.+..+-  ..+|.++  -+|+.+
T Consensus        18 vvv~F~a~wC------~~C~~~~p~l~~la~~~~~v~~~~vd~d~~~~~-~~l~~~~~V--~~~Pt~~~~~~G~~v   84 (103)
T cd02985          18 VVLEFALKHS------GPSVKIYPTMVKLSRTCNDVVFLLVNGDENDST-MELCRREKI--IEVPHFLFYKDGEKI   84 (103)
T ss_pred             EEEEEECCCC------HhHHHHhHHHHHHHHHCCCCEEEEEECCCChHH-HHHHHHcCC--CcCCEEEEEeCCeEE
Confidence            3555666665      6999888777652     577888998776432 355555554  6789764  478644

CDSP32 is a stress-inducible TRX, i.e., it acts as a TRX by reducing protein disulfides and is induced by environmental and oxidative stress conditions. It plays a critical role in plastid defense against oxidative damage, a role related to its function as a physiological electron donor to BAS1, a plastidic 2-cys peroxiredoxin. Plants lacking CDSP32 exhibit decreased photosystem II photochemical efficiencies and chlorophyll retention compared to WT controls, as well as an increased proportion of BAS1 in its overoxidized monomeric form.

>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]

Probab=91.62  E-value=0.63  Score=42.86  Aligned_cols=61  Identities=18%  Similarity=0.128  Sum_probs=50.6

Q ss_pred             CChhHHHHHHHHHhCCCeEE--EEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHHh
Q 048504          144 TFEDCYAVRMIFRGFRVWVD--ERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYE  209 (277)
Q Consensus       144 Tc~~C~~Vk~iL~~~gV~y~--ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~E  209 (277)
                      -|++|+++-+.|..++++|.  .+|++.-+   ++++.+.+.  ..+|.|-+||+.+-+.+.+.+..|
T Consensus        20 dcpf~qr~~m~L~~k~~~f~vttVd~~~kp---~~f~~~sp~--~~~P~l~~d~~~~tDs~~Ie~~Le   82 (221)
T KOG1422|consen   20 DCPFCQRLFMTLELKGVPFKVTTVDLSRKP---EWFLDISPG--GKPPVLKFDEKWVTDSDKIEEFLE   82 (221)
T ss_pred             CChhHHHHHHHHHHcCCCceEEEeecCCCc---HHHHhhCCC--CCCCeEEeCCceeccHHHHHHHHH
Confidence            68999999999999999875  67777665   467778865  789999999999999888876543

>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait

Probab=91.52  E-value=0.52  Score=36.13  Aligned_cols=54  Identities=11%  Similarity=0.122  Sum_probs=40.9

Q ss_pred             hhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          146 EDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       146 ~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      +.|.++..+|+..|++|+.+++.....       ...  ...+|.|-+||+.|++...+....
T Consensus        18 ~~~~kv~~~L~elglpye~~~~~~~~~-------~~P--~GkVP~L~~dg~vI~eS~aIl~yL   71 (74)
T cd03079          18 ASCLAVQTFLKMCNLPFNVRCRANAEF-------MSP--SGKVPFIRVGNQIVSEFGPIVQFV   71 (74)
T ss_pred             CCHHHHHHHHHHcCCCcEEEecCCccc-------cCC--CCcccEEEECCEEEeCHHHHHHHH
Confidence            589999999999999999887543111       111  146999999999999988877643

Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=91.22  E-value=0.16  Score=33.92  Aligned_cols=29  Identities=34%  Similarity=0.770  Sum_probs=23.4

Q ss_pred             eEeCCCCCCcceeeeC---CCCcceeCCCCCc
Q 048504          237 FVPCGNCSGSRKVFDE---ADGVPKRCLECNE  265 (277)
Q Consensus       237 fVpC~~C~GS~Kv~~~---~~~~~~rC~~CNE  265 (277)
                      .+-|++|+...++-++   ..+..+||+.|.+
T Consensus         2 ~i~CP~C~~~f~v~~~~l~~~~~~vrC~~C~~   33 (37)
T PF13719_consen    2 IITCPNCQTRFRVPDDKLPAGGRKVRCPKCGH   33 (37)
T ss_pred             EEECCCCCceEEcCHHHcccCCcEEECCCCCc
Confidence            3679999999998665   4566899999975

>PRK10996 thioredoxin 2; Provisional

Probab=91.06  E-value=0.72  Score=38.37  Aligned_cols=56  Identities=16%  Similarity=0.300  Sum_probs=37.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE--eCCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF--IRGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF--I~G~~I  198 (277)
                      ||.|+++|      |+.|+.....|..      .++.|..+|++.+++    +.+.++-  ..+|.++  -+|+.+
T Consensus        56 vv~F~a~w------C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~----l~~~~~V--~~~Ptlii~~~G~~v  119 (139)
T PRK10996         56 VIDFWAPW------CGPCRNFAPIFEDVAAERSGKVRFVKVNTEAERE----LSARFRI--RSIPTIMIFKNGQVV  119 (139)
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCHH----HHHhcCC--CccCEEEEEECCEEE
Confidence            55556665      5799987777754      246778888887654    4555554  6788874  488755

>PTZ00057 glutathione s-transferase; Provisional

Probab=91.05  E-value=2.1  Score=37.20  Aligned_cols=71  Identities=13%  Similarity=0.219  Sum_probs=48.3

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHH-HHHHHHHHh---CCCCCCCcEEEeCCEEEechhHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSA-YKKELQCVF---GGKNVTLPQVFIRGKHVGNADVL  204 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~-~reELke~l---G~~~~tvPqVFI~G~~IGG~del  204 (277)
                      ++++||.-..+      ..+..|+.+|+..||+|+.+.+....+ +. +..+..   ......+|.+.+||..|.....+
T Consensus         3 ~~~~L~y~~~~------~~~~~vrl~L~~~gi~ye~~~~~~~~~~~~-~~~~~~~~~~nP~g~vP~L~~~~~~l~eS~AI   75 (205)
T PTZ00057          3 EEIVLYYFDAR------GKAELIRLIFAYLGIEYTDKRFGENGDAFI-EFKNFKKEKDTPFEQVPILEMDNIIFAQSQAI   75 (205)
T ss_pred             CceEEEecCCC------cchHHHHHHHHHcCCCeEEEeccccchHHH-HHHhccccCCCCCCCCCEEEECCEEEecHHHH
Confidence            34788887655      378999999999999999988754321 11 111111   12237899999999877766665


Q ss_pred             HH
Q 048504          205 KS  206 (277)
Q Consensus       205 ~~  206 (277)
                      ..
T Consensus        76 ~~   77 (205)
T PTZ00057         76 VR   77 (205)
T ss_pred             HH
Confidence            55

>cd02987 Phd_like_Phd Phosducin (Phd)-like family, Phd subfamily; Phd is a cytosolic regulator of G protein functions

Probab=90.93  E-value=1  Score=39.32  Aligned_cols=59  Identities=20%  Similarity=0.242  Sum_probs=40.3

Q ss_pred             cEEEEE-ecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEEech
Q 048504          130 RIVVYL-TSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHVGNA  201 (277)
Q Consensus       130 kVVLYt-tSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~IGG~  201 (277)
                      .|||++ .+|      |+.|+.+..+|+.+     .|.|..+|++..     ++...++.  ..+|.|  |-+|+.|+..
T Consensus        85 ~VVV~Fya~w------c~~Ck~m~~~l~~LA~~~~~vkF~kVd~d~~-----~l~~~f~v--~~vPTlllyk~G~~v~~~  151 (175)
T cd02987          85 TVVVHIYEPG------IPGCAALNSSLLCLAAEYPAVKFCKIRASAT-----GASDEFDT--DALPALLVYKGGELIGNF  151 (175)
T ss_pred             EEEEEEECCC------CchHHHHHHHHHHHHHHCCCeEEEEEeccch-----hhHHhCCC--CCCCEEEEEECCEEEEEE
Confidence            566654 455      57999888777653     477888888742     56666654  789976  5699877533

It specifically binds G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane. This impedes the formation of a functional G protein trimer (G protein alphabetagamma), thereby inhibiting G protein-mediated signal transduction. Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-terminal helical domain.

>PRK10767 chaperone protein DnaJ; Provisional

Probab=90.44  E-value=0.28  Score=47.57  Aligned_cols=50  Identities=26%  Similarity=0.601  Sum_probs=34.6

Q ss_pred             CCCCCCCCccc------eEeCCCCCCcceeeeCCCC--cceeCCCCCcCcee---eCCCCC
Q 048504          226 GFVCGSCGDVR------FVPCGNCSGSRKVFDEADG--VPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       226 ~~~C~~CGg~r------fVpC~~C~GS~Kv~~~~~~--~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ...|..|.|.+      ...|+.|+|+-++....+.  ....|+.|+-.|.+   +|+.|.
T Consensus       142 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~  202 (371)
T PRK10767        142 LVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKDPCKKCH  202 (371)
T ss_pred             cccCCCCCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECCCCCCCCC
Confidence            35788887765      3579999998776543211  24579999888876   688885

>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]

Probab=90.42  E-value=1.7  Score=40.40  Aligned_cols=71  Identities=8%  Similarity=-0.049  Sum_probs=50.7

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +.|.||..-      .||+-++|+..|+.+||+|+.++++-.. --+-|.+..-- ...+|.+-.||+.|+-.-.+.+.
T Consensus         8 ~~vrL~~~w------~sPfa~R~~iaL~~KgI~yE~veedl~~-Ks~~ll~~np~-hkKVPvL~Hn~k~i~ESliiveY   78 (231)
T KOG0406|consen    8 GTVKLLGMW------FSPFAQRVRIALKLKGIPYEYVEEDLTN-KSEWLLEKNPV-HKKVPVLEHNGKPICESLIIVEY   78 (231)
T ss_pred             CeEEEEEee------cChHHHHHHHHHHhcCCceEEEecCCCC-CCHHHHHhccc-cccCCEEEECCceehhhHHHHHH
Confidence            679999986      4699999999999999998877665431 01223333311 26799999999997765555443

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=90.42  E-value=0.29  Score=36.27  Aligned_cols=41  Identities=27%  Similarity=0.601  Sum_probs=24.4

Q ss_pred             cceEeCCCCCCcceeeeCC------CCcceeCCCCCcCceee----CCCCC
Q 048504          235 VRFVPCGNCSGSRKVFDEA------DGVPKRCLECNENGLIR----CPDCC  275 (277)
Q Consensus       235 ~rfVpC~~C~GS~Kv~~~~------~~~~~rC~~CNEnGLvr----Cp~C~  275 (277)
                      .....|+.|+|+-.++...      ......|+.|+-.|.+.    |+.|.
T Consensus        13 ~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i~~~~C~~C~   63 (66)
T PF00684_consen   13 KKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKIIEKDPCKTCK   63 (66)
T ss_dssp             TT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-TSSB-SSST
T ss_pred             CCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEECCCCCCCCC
Confidence            4456788888887764322      11367888888888875    77774

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>KOG0907 consensus Thioredoxin [Posttranslational modification, protein turnover, chaperones]

Probab=90.15  E-value=1.1  Score=36.28  Aligned_cols=62  Identities=24%  Similarity=0.347  Sum_probs=40.1

Q ss_pred             CcEEE-EEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE-E-eCC----E
Q 048504          129 DRIVV-YLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV-F-IRG----K  196 (277)
Q Consensus       129 ~kVVL-YttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV-F-I~G----~  196 (277)
                      ..||| |+++||      +.|+.+.=+|+.+     .+.|..+|++.    -.++.+..+-  ..+|.+ | -+|    +
T Consensus        22 kliVvdF~a~wC------gPCk~i~P~~~~La~~y~~v~Flkvdvde----~~~~~~~~~V--~~~PTf~f~k~g~~~~~   89 (106)
T KOG0907|consen   22 KLVVVDFYATWC------GPCKAIAPKFEKLAEKYPDVVFLKVDVDE----LEEVAKEFNV--KAMPTFVFYKGGEEVDE   89 (106)
T ss_pred             CeEEEEEECCCC------cchhhhhhHHHHHHHHCCCCEEEEEeccc----CHhHHHhcCc--eEeeEEEEEECCEEEEE
Confidence            34455 666776      5999999888874     46678899987    2344444443  788987 3 355    4


Q ss_pred             EEechh
Q 048504          197 HVGNAD  202 (277)
Q Consensus       197 ~IGG~d  202 (277)
                      ++|.-.
T Consensus        90 ~vGa~~   95 (106)
T KOG0907|consen   90 VVGANK   95 (106)
T ss_pred             EecCCH
Confidence            455543

>cd03065 PDI_b_Calsequestrin_N PDIb family, Calsequestrin subfamily, N-terminal TRX-fold domain; Calsequestrin is the major calcium storage protein in the sarcoplasmic reticulum (SR) of skeletal and cardiac muscle

Probab=89.92  E-value=1.9  Score=35.76  Aligned_cols=62  Identities=8%  Similarity=0.043  Sum_probs=45.1

Q ss_pred             CCcEEEEEecCCCCCCCCh-hHH----------HHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeC
Q 048504          128 EDRIVVYLTSLRGIRRTFE-DCY----------AVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIR  194 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~-~C~----------~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~  194 (277)
                      ...||+|+.++|+    +| .|+          .+..+|+..+|.+-.+|++.++    +|.+..|-  ..+|.+  |-|
T Consensus        27 ~~~vvv~f~a~wc----~p~~Ck~~~~~p~~~~~aa~~l~~~~v~~~kVD~d~~~----~La~~~~I--~~iPTl~lfk~   96 (120)
T cd03065          27 DVLCLLYHEPVES----DKEAQKQFQMEELVLELAAQVLEDKGIGFGLVDSKKDA----KVAKKLGL--DEEDSIYVFKD   96 (120)
T ss_pred             CceEEEEECCCcC----ChhhChhhcchhhHHHHHHHHhhcCCCEEEEEeCCCCH----HHHHHcCC--ccccEEEEEEC
Confidence            3468888888873    23 475          4556666778999999999885    56666765  788887  779


Q ss_pred             CEEEe
Q 048504          195 GKHVG  199 (277)
Q Consensus       195 G~~IG  199 (277)
                      |+.+.
T Consensus        97 G~~v~  101 (120)
T cd03065          97 DEVIE  101 (120)
T ss_pred             CEEEE
Confidence            98653

It stores calcium ions in sufficient quantities (up to 20 mM) to allow repetitive contractions and is essential to maintain movement, respiration and heart beat. A missense mutation in human cardiac calsequestrin is associated with catecholamine-induced polymorphic ventricular tachycardia (CPVT), a rare disease characterized by seizures or sudden death in response to physiologic or emotional stress. Calsequestrin is a highly acidic protein with up to 50 calcium binding sites formed simply by the clustering of two or more acidic residues. The monomer contains three redox inactive TRX-fold domains. Calsequestrin is condensed as a linear polymer in the SR lumen and is membrane-anchored through binding with intra-membrane proteins triadin, junctin and ryanodine receptor (RyR) Ca2

>cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes

Probab=89.82  E-value=2.4  Score=31.82  Aligned_cols=56  Identities=18%  Similarity=0.267  Sum_probs=37.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~I  198 (277)
                      ||.|..++      |..|+++...|+.      ..+.+..+|++..+    ++.+.++-  ..+|.+  |.+|+.+
T Consensus        18 ~v~f~~~~------C~~C~~~~~~l~~l~~~~~~~i~~~~vd~~~~~----~~~~~~~i--~~~Pt~~~~~~g~~~   81 (97)
T cd02984          18 VLHFWAPW------AEPCKQMNQVFEELAKEAFPSVLFLSIEAEELP----EISEKFEI--TAVPTFVFFRNGTIV   81 (97)
T ss_pred             EEEEECCC------CHHHHHHhHHHHHHHHHhCCceEEEEEccccCH----HHHHhcCC--ccccEEEEEECCEEE
Confidence            45566665      5799999888875      25677778877654    45555654  678966  5577644

PICOT contains an N-terminal TRX-like domain, which does not contain the catalytic CXXC motif, followed by one to three glutaredoxin domains. The TRX-like domain is required for interaction with PKC theta. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli.

>cd03004 PDI_a_ERdj5_C PDIa family, C-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains

Probab=89.81  E-value=1.8  Score=33.11  Aligned_cols=53  Identities=17%  Similarity=0.179  Sum_probs=35.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRG  195 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G  195 (277)
                      ||.|+++||      +.|+.+...|+.    +  .+.+..+|++.+++    +.+..|-  ..+|.+  |-+|
T Consensus        23 ~v~f~a~wC------~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~i--~~~Pt~~~~~~g   83 (104)
T cd03004          23 LVDFYAPWC------GPCQALLPELRKAARALKGKVKVGSVDCQKYES----LCQQANI--RAYPTIRLYPGN   83 (104)
T ss_pred             EEEEECCCC------HHHHHHHHHHHHHHHHhcCCcEEEEEECCchHH----HHHHcCC--CcccEEEEEcCC
Confidence            556667765      799987766653    2  47788899887643    4455554  788987  3455

This subfamily is composed of the three TRX domains located at the C-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation. Also included in the alignment is the single complete TRX domain of an uncharacterized protein from Tetraodon nigroviridis, which also contains a DnaJ domain at its N-terminus.

>PRK14287 chaperone protein DnaJ; Provisional

Probab=89.77  E-value=0.31  Score=47.43  Aligned_cols=49  Identities=31%  Similarity=0.767  Sum_probs=34.9

Q ss_pred             CCCCCCCccc------eEeCCCCCCcceeeeCCC---C---cceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVR------FVPCGNCSGSRKVFDEAD---G---VPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~r------fVpC~~C~GS~Kv~~~~~---~---~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+      -..|+.|+|+-.+.....   +   ....|+.|+-.|.+   +|+.|.
T Consensus       139 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~  202 (371)
T PRK14287        139 ETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCG  202 (371)
T ss_pred             ccCCCCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCC
Confidence            5788887655      467999999977654321   1   24689999999976   588885

>PRK14290 chaperone protein DnaJ; Provisional

Probab=89.34  E-value=0.35  Score=46.86  Aligned_cols=49  Identities=27%  Similarity=0.721  Sum_probs=32.8

Q ss_pred             CCCCCCCccce-----EeCCCCCCcceeeeCCC-Cc-----ceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVRF-----VPCGNCSGSRKVFDEAD-GV-----PKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~rf-----VpC~~C~GS~Kv~~~~~-~~-----~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+.     ..|+.|+|+-.+..... +.     ..+|+.|+-.|-+   +|+.|.
T Consensus       150 ~~C~~C~G~g~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~  212 (365)
T PRK14290        150 AMCPDCSGTGAKNGKLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCN  212 (365)
T ss_pred             ccCCCCccccCCCCCCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEccCCCCCCC
Confidence            56777766554     56999999876643321 11     2579999888844   688884

>PRK14300 chaperone protein DnaJ; Provisional

Probab=89.30  E-value=0.36  Score=46.93  Aligned_cols=49  Identities=27%  Similarity=0.670  Sum_probs=35.0

Q ss_pred             CCCCCCCccc------eEeCCCCCCcceeeeCCCC--cceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVR------FVPCGNCSGSRKVFDEADG--VPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~r------fVpC~~C~GS~Kv~~~~~~--~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+      ...|+.|+|+-+++...+.  ....|+.|+-.|-+   +|+.|.
T Consensus       146 ~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~  205 (372)
T PRK14300        146 VKCDTCHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIKNPCKKCH  205 (372)
T ss_pred             cccCCCCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEeCCCCCCCC
Confidence            5677777654      5779999999776543211  24689999999966   688885

>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional

Probab=89.19  E-value=1.9  Score=37.55  Aligned_cols=67  Identities=9%  Similarity=0.155  Sum_probs=45.7

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEe-----CC--EEEech
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFI-----RG--KHVGNA  201 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI-----~G--~~IGG~  201 (277)
                      +.||... +      +.|.+|+.+|+.+||+|+.++|+..  .....++.++.-.  ..+|.+..     ||  ..|-..
T Consensus         2 ~~Ly~~~-~------~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iNP~--gkVP~L~~~~~~d~g~~~~L~ES   72 (215)
T PRK13972          2 IDLYFAP-T------PNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPN--NKIPAIVDHSPADGGEPLSLFES   72 (215)
T ss_pred             eEEEECC-C------CChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhCcC--CCCCEEEeCCCCCCCCceeEEcH
Confidence            4678764 2      6899999999999999988777643  2233567777643  68999976     34  235544


Q ss_pred             hHHHH
Q 048504          202 DVLKS  206 (277)
Q Consensus       202 del~~  206 (277)
                      ..+.+
T Consensus        73 ~AI~~   77 (215)
T PRK13972         73 GAILL   77 (215)
T ss_pred             HHHHH
Confidence            44444

>cd02950 TxlA TRX-like protein A (TxlA) family; TxlA was originally isolated from the cyanobacterium Synechococcus

Probab=88.72  E-value=3.4  Score=34.59  Aligned_cols=79  Identities=11%  Similarity=0.117  Sum_probs=44.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE-e--CCEEE---
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF-I--RGKHV---  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF-I--~G~~I---  198 (277)
                      ||.|.++|      |+.|+.....|..+      .+.|..+|++.+. + .++.+.++-  ..+|.++ +  +|+.+   
T Consensus        24 vV~F~A~W------C~~C~~~~p~l~~l~~~~~~~~~~v~v~vd~~~-~-~~~~~~~~V--~~iPt~v~~~~~G~~v~~~   93 (142)
T cd02950          24 LVEFYADW------CTVCQEMAPDVAKLKQKYGDQVNFVMLNVDNPK-W-LPEIDRYRV--DGIPHFVFLDREGNEEGQS   93 (142)
T ss_pred             EEEEECCc------CHHHHHhHHHHHHHHHHhccCeeEEEEEcCCcc-c-HHHHHHcCC--CCCCEEEEECCCCCEEEEE
Confidence            44555666      47999888777642      3667778876542 1 234455554  6899874 5  46544   


Q ss_pred             echhHHHHHHhhccHHHHhcCCC
Q 048504          199 GNADVLKSMYETGELARVLDGFP  221 (277)
Q Consensus       199 GG~del~~L~EsGeL~klL~~~~  221 (277)
                      .|+..-.+|.  ..|++++++.+
T Consensus        94 ~G~~~~~~l~--~~l~~l~~~~~  114 (142)
T cd02950          94 IGLQPKQVLA--QNLDALVAGEP  114 (142)
T ss_pred             eCCCCHHHHH--HHHHHHHcCCC
Confidence            2333222232  23666666543

It is found only in oxygenic photosynthetic organisms. TRX is a small enzyme that participate in redox reactions, via the reversible oxidation of an active site dithiol present in a CXXC motif. Disruption of the txlA gene suggests that the protein is involved in the redox regulation of the structure and function of photosynthetic apparatus. The plant homolog (designated as HCF164) is localized in the chloroplast and is involved in the assembly of the cytochrome b6f complex, which takes a central position in photosynthetic electron transport.

>cd02962 TMX2 TMX2 family; composed of proteins similar to human TMX2, a 372-amino acid TRX-related transmembrane protein, identified and characterized through the cloning of its cDNA from a human fetal library

Probab=88.62  E-value=2.2  Score=36.72  Aligned_cols=59  Identities=20%  Similarity=0.369  Sum_probs=39.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-------CCCeEEEEECCCCHHHHHHHHHHhCCC----CCCCcEE--EeCCEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-------FRVWVDERDVSMDSAYKKELQCVFGGK----NVTLPQV--FIRGKH  197 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-------~gV~y~ErDVs~d~~~reELke~lG~~----~~tvPqV--FI~G~~  197 (277)
                      ||.|.++||      +.|+.+...|+.       .++.+..+|++.+++..++    .+-.    ...+|.+  |.+|+.
T Consensus        51 vV~Fya~wC------~~Ck~l~p~l~~la~~~~~~~v~f~~VDvd~~~~la~~----~~V~~~~~v~~~PT~ilf~~Gk~  120 (152)
T cd02962          51 LVEFFTTWS------PECVNFAPVFAELSLKYNNNNLKFGKIDIGRFPNVAEK----FRVSTSPLSKQLPTIILFQGGKE  120 (152)
T ss_pred             EEEEECCCC------HHHHHHHHHHHHHHHHcccCCeEEEEEECCCCHHHHHH----cCceecCCcCCCCEEEEEECCEE
Confidence            667777765      799988877653       2488899999888754433    3321    1238876  678876


Q ss_pred             Ee
Q 048504          198 VG  199 (277)
Q Consensus       198 IG  199 (277)
                      ++
T Consensus       121 v~  122 (152)
T cd02962         121 VA  122 (152)
T ss_pred             EE
Confidence            64

It contains a TRX domain but the redox active CXXC motif is replaced with SXXC. Sequence analysis predicts that TMX2 may be a Type I membrane protein, with its C-terminal half protruding on the luminal side of the endoplasmic reticulum (ER). In addition to the TRX domain, transmembrane region and ER-retention signal, TMX2 also contains a Myb DNA-binding domain repeat signature and a dileucine motif in the tail.

>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=88.56  E-value=3.3  Score=31.28  Aligned_cols=61  Identities=10%  Similarity=0.127  Sum_probs=39.5

Q ss_pred             hhHHHHHHHHHhCCCeEEEEECCCCH-H-H-HHHHH-HH--hCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          146 EDCYAVRMIFRGFRVWVDERDVSMDS-A-Y-KKELQ-CV--FGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       146 ~~C~~Vk~iL~~~gV~y~ErDVs~d~-~-~-reELk-e~--lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      ..|.+++.+|...||+|+.+.|+... + . .++.. ..  ++....++|.+..||..+.-...+..
T Consensus        10 ~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~g~~l~ES~AIl~   76 (82)
T cd03075          10 GLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDFPNLPYYIDGDVKLTQSNAILR   76 (82)
T ss_pred             cccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcCCCCCEEEECCEEEeehHHHHH
Confidence            47899999999999999887776432 1 1 11211 11  12123689999988877766555554

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc

>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]

Probab=88.38  E-value=1.3  Score=38.39  Aligned_cols=67  Identities=9%  Similarity=0.017  Sum_probs=47.8

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH-HHHHHHHHHhCCCCCCCcEEEeCCE-EEechhHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS-AYKKELQCVFGGKNVTLPQVFIRGK-HVGNADVLKS  206 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~-~~reELke~lG~~~~tvPqVFI~G~-~IGG~del~~  206 (277)
                      .+|....      .++|.+|+-+|..+|++|+.+.|+... ....++..+...  ..||.+-.+|- .|-....|.+
T Consensus         2 ~L~~~~~------sp~~~kv~l~l~e~g~~ye~~~v~~~~~~~~~~~~~~nP~--gkVPvL~~~~~~~l~ES~AI~~   70 (211)
T COG0625           2 KLYGSPT------SPYSRKVRLALEEKGLPYEIVLVDLDAEQKPPDFLALNPL--GKVPALVDDDGEVLTESGAILE   70 (211)
T ss_pred             eeecCCC------CcchHHHHHHHHHcCCCceEEEeCcccccCCHHHHhcCCC--CCCCEEeeCCCCeeecHHHHHH
Confidence            4566654      279999999999999999988887764 444666777644  68999987764 4444444433

>TIGR01126 pdi_dom protein disulfide-isomerase domain

Probab=88.24  E-value=2  Score=32.09  Aligned_cols=52  Identities=13%  Similarity=0.275  Sum_probs=34.8

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh-------C-CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG-------F-RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI  193 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~-------~-gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI  193 (277)
                      -|++|++++|      +.|+.+...|+.       . ++.+..+|++.++    ++.+.++-  ..+|.+++
T Consensus        16 ~~i~f~~~~C------~~c~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~~i--~~~P~~~~   75 (102)
T TIGR01126        16 VLVEFYAPWC------GHCKNLAPEYEKLAKELKGDPDIVLAKVDATAEK----DLASRFGV--SGFPTIKF   75 (102)
T ss_pred             EEEEEECCCC------HHHHhhChHHHHHHHHhccCCceEEEEEEccchH----HHHHhCCC--CcCCEEEE
Confidence            4777777765      799876666643       2 3777888887664    34455654  78998843

This model describes a domain of eukaryotic protein disulfide isomerases, generally found in two copies. The high cutoff for total score reflects the expectation of finding both copies. The domain is similar to thioredoxin but the redox-active disulfide region motif is APWCGHCK.

>cd02996 PDI_a_ERp44 PDIa family, endoplasmic reticulum protein 44 (ERp44) subfamily; ERp44 is an ER-resident protein, induced during stress, involved in thiol-mediated ER retention

Probab=88.09  E-value=2  Score=33.37  Aligned_cols=54  Identities=15%  Similarity=0.156  Sum_probs=37.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC------------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE--eCCE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF------------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF--IRGK  196 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~------------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF--I~G~  196 (277)
                      +|.|.++||      +.|++....|+..            .+.|-.+|.+.+.    +|.+.+|-  .++|.++  -+|+
T Consensus        22 lv~F~a~wC------~~C~~~~p~~~~~a~~~~~~~~~~~~~~~~~vd~d~~~----~l~~~~~v--~~~Ptl~~~~~g~   89 (108)
T cd02996          22 LVNFYADWC------RFSQMLHPIFEEAAAKIKEEFPDAGKVVWGKVDCDKES----DIADRYRI--NKYPTLKLFRNGM   89 (108)
T ss_pred             EEEEECCCC------HHHHhhHHHHHHHHHHHhhccCCCCcEEEEEEECCCCH----HHHHhCCC--CcCCEEEEEeCCc
Confidence            556667765      7999888777521            3677888888764    45566665  7899884  4554

It contains an N-terminal TRX domain, similar to that of PDIa, with a CXFS motif followed by two redox inactive TRX-like domains, homologous to the b and b' domains of PDI. The CXFS motif in the N-terminal domain allows ERp44 to form stable reversible mixed disulfides with its substrates. Through this activity, ERp44 mediates the ER localization of Ero1alpha, a protein that oxidizes protein disulfide isomerases into their active form. ERp44 also prevents the secretion of unassembled cargo protein with unpaired cysteines. It also modulates the activity of inositol 1,4,5-triphosphate type I receptor (IP3R1), an intracellular channel protein that mediates calcium release from the ER to the cytosol.

>cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain

Probab=87.96  E-value=2.5  Score=31.76  Aligned_cols=56  Identities=14%  Similarity=0.294  Sum_probs=37.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE--eCCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF--IRGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF--I~G~~I  198 (277)
                      ||.|.++|      |+.|+.+...|+.    +  .+.+..+|++.+.    +|.+.++-  ..+|.++  -+|+.+
T Consensus        16 lv~f~a~w------C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~----~l~~~~~i--~~~Pt~~~~~~g~~~   79 (96)
T cd02956          16 VVDFWAPR------SPPSKELLPLLERLAEEYQGQFVLAKVNCDAQP----QIAQQFGV--QALPTVYLFAAGQPV   79 (96)
T ss_pred             EEEEECCC------ChHHHHHHHHHHHHHHHhCCcEEEEEEeccCCH----HHHHHcCC--CCCCEEEEEeCCEEe
Confidence            55566666      4799988777764    2  3556788887764    45555654  7899885  466544

Its gene has been sequenced from several gammaproteobacteria and actinobacteria.

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=87.92  E-value=0.41  Score=46.73  Aligned_cols=21  Identities=33%  Similarity=0.680  Sum_probs=13.9

Q ss_pred             CCCCCCCccceEeCCCCCCcc
Q 048504          227 FVCGSCGDVRFVPCGNCSGSR  247 (277)
Q Consensus       227 ~~C~~CGg~rfVpC~~C~GS~  247 (277)
                      ..|.+|-|.+-+.|+.|+|+-
T Consensus       188 ~~ch~c~gRG~~vc~gc~g~G  208 (406)
T KOG2813|consen  188 TFCHACLGRGAMVCHGCSGSG  208 (406)
T ss_pred             hhhhcccCCCceeccCcCCCC
Confidence            356667666666777776664

>PRK10357 putative glutathione S-transferase; Provisional

Probab=87.87  E-value=1.5  Score=37.56  Aligned_cols=65  Identities=5%  Similarity=-0.084  Sum_probs=43.9

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe-CCEEEechhHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI-RGKHVGNADVLK  205 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI-~G~~IGG~del~  205 (277)
                      .||+...      ++++++|+.+|+.+||+|+.++++.... ..++.+....  .++|.+.. +|..+-....+.
T Consensus         2 ~Ly~~~~------s~~~~~v~~~L~~~gv~ye~~~~~~~~~-~~~~~~~nP~--g~vP~L~~~~g~~l~eS~aI~   67 (202)
T PRK10357          2 KLIGSYT------SPFVRKISILLLEKGITFEFVNELPYNA-DNGVAQYNPL--GKVPALVTEEGECWFDSPIIA   67 (202)
T ss_pred             eeecCCC------CchHHHHHHHHHHcCCCCeEEecCCCCC-chhhhhcCCc--cCCCeEEeCCCCeeecHHHHH
Confidence            4677754      4799999999999999999887765321 1244444433  68999985 565554444443

>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi

Probab=87.77  E-value=6.5  Score=29.41  Aligned_cols=61  Identities=11%  Similarity=0.138  Sum_probs=45.2

Q ss_pred             CCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHHh
Q 048504          139 RGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYE  209 (277)
Q Consensus       139 cgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~E  209 (277)
                      -|+.-..|+|-++..+|+-.+++|+.+... ++.       ...  ...+|.|..+|+.|+|.+.+.+..+
T Consensus        10 ~g~ps~sp~clk~~~~Lr~~~~~~~v~~~~-n~~-------~sp--~gkLP~l~~~~~~i~d~~~Ii~~L~   70 (73)
T cd03078          10 WGLPSVDPECLAVLAYLKFAGAPLKVVPSN-NPW-------RSP--TGKLPALLTSGTKISGPEKIIEYLR   70 (73)
T ss_pred             CCCCcCCHHHHHHHHHHHcCCCCEEEEecC-CCC-------CCC--CCccCEEEECCEEecChHHHHHHHH
Confidence            355566699999999999999999665333 221       011  2469999999999999998887543

Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.

>cd02961 PDI_a_family Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants

Probab=87.71  E-value=2.8  Score=30.56  Aligned_cols=51  Identities=18%  Similarity=0.331  Sum_probs=33.2

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh----C----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG----F----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF  192 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~----~----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF  192 (277)
                      -|++|++++      |+.|+.+...|+.    +    ++.+..+|.+.+.    ++.+.++-  ..+|.++
T Consensus        18 ~~v~f~~~~------C~~C~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~i--~~~Pt~~   76 (101)
T cd02961          18 VLVEFYAPW------CGHCKALAPEYEKLAKELKGDGKVVVAKVDCTANN----DLCSEYGV--RGYPTIK   76 (101)
T ss_pred             EEEEEECCC------CHHHHhhhHHHHHHHHHhccCCceEEEEeeccchH----HHHHhCCC--CCCCEEE
Confidence            355566654      5799988777754    3    4566777776543    45555654  6899884

Members of this family include PDI and PDI-related proteins like ERp72, ERp57 (or ERp60), ERp44, P5, PDIR, ERp46 and the transmembrane PDIs. PDI, ERp57, ERp72, P5, PDIR and ERp46 are all oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. These proteins usually contain multiple copies of a redox active TRX (a) domain containing a CXXC motif, and may also contain one or more redox inactive TRX-like (b) domains. Only one a domain is required for the oxidase function but multiple copies

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=87.19  E-value=0.58  Score=44.95  Aligned_cols=49  Identities=24%  Similarity=0.622  Sum_probs=31.5

Q ss_pred             CCCCCCCccc------eEeCCCCCCcceeeeCCC------CcceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVR------FVPCGNCSGSRKVFDEAD------GVPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~r------fVpC~~C~GS~Kv~~~~~------~~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+      ...|+.|+|.-.+.....      .....|+.|+-.|.+   .|+.|.
T Consensus       144 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~  207 (354)
T TIGR02349       144 ESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCK  207 (354)
T ss_pred             CcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCC
Confidence            5677777665      456888888866543211      013578888888765   477774

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>cd02994 PDI_a_TMX PDIa family, TMX subfamily; composed of proteins similar to the TRX-related human transmembrane protein, TMX

Probab=87.18  E-value=2.6  Score=32.10  Aligned_cols=55  Identities=16%  Similarity=0.317  Sum_probs=38.3

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh-------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCE
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG-------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGK  196 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~-------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~  196 (277)
                      -+|.|..+||      +.|+.+...|+.       .+|.+..+|++.++.    +.+.++-  ..+|.+++  +|+
T Consensus        19 ~lv~f~a~wC------~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~----~~~~~~i--~~~Pt~~~~~~g~   82 (101)
T cd02994          19 WMIEFYAPWC------PACQQLQPEWEEFADWSDDLGINVAKVDVTQEPG----LSGRFFV--TALPTIYHAKDGV   82 (101)
T ss_pred             EEEEEECCCC------HHHHHHhHHHHHHHHhhccCCeEEEEEEccCCHh----HHHHcCC--cccCEEEEeCCCC
Confidence            5777788775      799988777753       357778888887654    4444543  78898864  553

TMX is a type I integral membrane protein; the N-terminal redox active TRX domain is present in the endoplasmic reticulum (ER) lumen while the C-terminus is oriented towards the cytoplasm. It is expressed in many cell types and its active site motif (CPAC) is unique. In vitro, TMX reduces interchain disulfides of insulin and renatures inactive RNase containing incorrect disulfide bonds. The C. elegans homolog, DPY-11, is expressed only in the hypodermis and resides in the cytoplasm. It is required for body and sensory organ morphogeneis. Another uncharacterized TRX-related transmembrane protein, human TMX4, is included in the alignment. The active site sequence of TMX4 is CPSC.

>PRK14284 chaperone protein DnaJ; Provisional

Probab=87.05  E-value=0.63  Score=45.60  Aligned_cols=50  Identities=26%  Similarity=0.650  Sum_probs=32.4

Q ss_pred             CCCCCCCCccce------EeCCCCCCcceeeeCCC--CcceeCCCCCcCcee---eCCCCC
Q 048504          226 GFVCGSCGDVRF------VPCGNCSGSRKVFDEAD--GVPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       226 ~~~C~~CGg~rf------VpC~~C~GS~Kv~~~~~--~~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ...|..|.|.+.      ..|+.|+|+-.++...+  .....|+.|+-.|.+   .|+.|.
T Consensus       158 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~  218 (391)
T PRK14284        158 YKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVITDPCSVCR  218 (391)
T ss_pred             eccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcccCCcCCCCC
Confidence            357777766543      56888888866543221  124688888888865   577774

>COG3019 Predicted metal-binding protein [General function prediction only]

Probab=87.02  E-value=5.7  Score=34.64  Aligned_cols=74  Identities=15%  Similarity=0.113  Sum_probs=54.5

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCC--CCCCcEEEeCCEEEech---h
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGK--NVTLPQVFIRGKHVGNA---D  202 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~--~~tvPqVFI~G~~IGG~---d  202 (277)
                      .-++++|..+.||      =|+.--+.|+..|+.+...+.+.    +..|++++|-+  -.+==+..|||.||-|.   +
T Consensus        25 ~~~~~vyksPnCG------CC~~w~~~mk~~Gf~Vk~~~~~d----~~alK~~~gIp~e~~SCHT~VI~Gy~vEGHVPa~   94 (149)
T COG3019          25 ATEMVVYKSPNCG------CCDEWAQHMKANGFEVKVVETDD----FLALKRRLGIPYEMQSCHTAVINGYYVEGHVPAE   94 (149)
T ss_pred             eeeEEEEeCCCCc------cHHHHHHHHHhCCcEEEEeecCc----HHHHHHhcCCChhhccccEEEEcCEEEeccCCHH
Confidence            4469999999876      79999999999999988877653    45677777742  14456789999999886   4


Q ss_pred             HHHHHHhhc
Q 048504          203 VLKSMYETG  211 (277)
Q Consensus       203 el~~L~EsG  211 (277)
                      ++.+|.+++
T Consensus        95 aI~~ll~~~  103 (149)
T COG3019          95 AIARLLAEK  103 (149)
T ss_pred             HHHHHHhCC
Confidence            444444443

>PRK14286 chaperone protein DnaJ; Provisional

Probab=86.90  E-value=0.59  Score=45.54  Aligned_cols=49  Identities=24%  Similarity=0.623  Sum_probs=30.5

Q ss_pred             CCCCCCCccce------EeCCCCCCcceeeeCCCC--cceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVRF------VPCGNCSGSRKVFDEADG--VPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~rf------VpC~~C~GS~Kv~~~~~~--~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+.      ..|+.|+|+-.+....+.  ....|+.|+--|.+   +|+.|.
T Consensus       151 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~  210 (372)
T PRK14286        151 ESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTCG  210 (372)
T ss_pred             ccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEecccCCCCC
Confidence            46777777653      568888888665432211  24578888777754   577764

>PRK14285 chaperone protein DnaJ; Provisional

Probab=86.84  E-value=0.68  Score=45.00  Aligned_cols=49  Identities=33%  Similarity=0.713  Sum_probs=31.8

Q ss_pred             CCCCCCCccc------eEeCCCCCCcceeeeCCCC--cceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVR------FVPCGNCSGSRKVFDEADG--VPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~r------fVpC~~C~GS~Kv~~~~~~--~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+      -..|+.|+|+-.+....+.  ....|+.|+-.|-+   +|+.|.
T Consensus       147 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~  206 (365)
T PRK14285        147 MLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIISNPCKSCK  206 (365)
T ss_pred             ccCCCCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccccCCCCCCCC
Confidence            4677776665      3568888888766542211  24578888888855   577774

>PRK14298 chaperone protein DnaJ; Provisional

Probab=86.80  E-value=0.62  Score=45.50  Aligned_cols=49  Identities=24%  Similarity=0.672  Sum_probs=33.3

Q ss_pred             CCCCCCCccce------EeCCCCCCcceeeeCCC------CcceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVRF------VPCGNCSGSRKVFDEAD------GVPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~rf------VpC~~C~GS~Kv~~~~~------~~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+.      ..|+.|+|+-.+.....      .....|+.|+-.|-+   +|+.|.
T Consensus       142 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~  205 (377)
T PRK14298        142 ERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCS  205 (377)
T ss_pred             ccCCCCCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCC
Confidence            57888877654      56999999876643211      125678888888854   688774

>cd03003 PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains

Probab=86.69  E-value=2.7  Score=32.12  Aligned_cols=54  Identities=17%  Similarity=0.290  Sum_probs=36.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE--eCCE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF--IRGK  196 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF--I~G~  196 (277)
                      +|.|+++||      +.|+.+...|+..      .+.+..+|++.++.    +.+..+-  ..+|.++  -+|+
T Consensus        22 ~v~f~a~wC------~~C~~~~p~~~~~a~~~~~~~~~~~vd~~~~~~----~~~~~~v--~~~Pt~~~~~~g~   83 (101)
T cd03003          22 FVNFYSPRC------SHCHDLAPTWREFAKEMDGVIRIGAVNCGDDRM----LCRSQGV--NSYPSLYVFPSGM   83 (101)
T ss_pred             EEEEECCCC------hHHHHhHHHHHHHHHHhcCceEEEEEeCCccHH----HHHHcCC--CccCEEEEEcCCC
Confidence            556667665      7999888887642      35677888887654    4444543  6889884  4665

This subfamily is comprised of the first TRX domain of ERdj5 located after the DnaJ domain at the N-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation.

>PRK14289 chaperone protein DnaJ; Provisional

Probab=86.66  E-value=0.57  Score=45.71  Aligned_cols=49  Identities=29%  Similarity=0.686  Sum_probs=34.1

Q ss_pred             CCCCCCCccc------eEeCCCCCCcceeeeCCC------CcceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVR------FVPCGNCSGSRKVFDEAD------GVPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~r------fVpC~~C~GS~Kv~~~~~------~~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+      ...|+.|+|+-+++....      .....|+.|+-.|-+   +|+.|.
T Consensus       155 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~  218 (386)
T PRK14289        155 VPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCG  218 (386)
T ss_pred             cccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCC
Confidence            5788886655      467999999977653211      125689999888865   788884

>PRK14282 chaperone protein DnaJ; Provisional

Probab=86.59  E-value=0.65  Score=45.09  Aligned_cols=49  Identities=29%  Similarity=0.763  Sum_probs=32.8

Q ss_pred             CCCCCCCccc------eEeCCCCCCcceeeeCC------CCcceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVR------FVPCGNCSGSRKVFDEA------DGVPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~r------fVpC~~C~GS~Kv~~~~------~~~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+      ...|+.|+|+-.+....      ......|+.|+-.|.+   +|+.|.
T Consensus       153 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~  216 (369)
T PRK14282        153 ETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECG  216 (369)
T ss_pred             ccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCC
Confidence            4677777654      45699999987664321      0125688888888865   577774

>PF06953 ArsD: Arsenical resistance operon trans-acting repressor ArsD; InterPro: IPR010712 This family consists of several bacterial arsenical resistance operon trans-acting repressor ArsD proteins

Probab=86.47  E-value=3.1  Score=35.07  Aligned_cols=76  Identities=16%  Similarity=0.147  Sum_probs=41.7

Q ss_pred             CcEEEEEecCCCCCCCCh---h-----HHHHHHHHHhCCCeEEEEECCCCHHHHH------HHHHHhCCCCCCCcEEEeC
Q 048504          129 DRIVVYLTSLRGIRRTFE---D-----CYAVRMIFRGFRVWVDERDVSMDSAYKK------ELQCVFGGKNVTLPQVFIR  194 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~---~-----C~~Vk~iL~~~gV~y~ErDVs~d~~~re------ELke~lG~~~~tvPqVFI~  194 (277)
                      .+|.||--.+|=..-.|-   +     =..+-..|+..||.+.-..+..++....      ++.+..|.  ..+|.++||
T Consensus         2 ~~i~ifepamCC~tGvCG~~vd~eL~~~a~~~~~Lk~~gv~v~RyNL~~~P~aF~~n~~V~~~L~~~G~--e~LPitlVd   79 (123)
T PF06953_consen    2 KKIEIFEPAMCCSTGVCGPSVDPELVRFAADLDWLKEQGVEVERYNLAQNPQAFVENPEVNQLLQTEGA--EALPITLVD   79 (123)
T ss_dssp             -EEEEEE-S-SSTTS-SSSS--HHHHHHHHHHHHHHHTT-EEEEEETTT-TTHHHHSHHHHHHHHHH-G--GG-SEEEET
T ss_pred             CceEEeccccccccCccCCCCCHHHHHHHHHHHHHHhCCceEEEEccccCHHHHHhCHHHHHHHHHcCc--ccCCEEEEC
Confidence            456677666542222231   1     2255667788999999999999875432      22222354  689999999


Q ss_pred             CEEE--echhHHHH
Q 048504          195 GKHV--GNADVLKS  206 (277)
Q Consensus       195 G~~I--GG~del~~  206 (277)
                      |+.+  |.|=...+
T Consensus        80 Geiv~~G~YPt~eE   93 (123)
T PF06953_consen   80 GEIVKTGRYPTNEE   93 (123)
T ss_dssp             TEEEEESS---HHH
T ss_pred             CEEEEecCCCCHHH
Confidence            9976  77755444

ArsD is a trans-acting repressor of the arsRDABC operon that confers resistance to arsenicals and antimonials in Escherichia coli. It possesses two-pairs of vicinal cysteine residues, Cys(12)-Cys(13) and Cys(112)-Cys(113), that potentially form separate binding sites for the metalloids that trigger dissociation of ArsD from the operon. However, as a homodimer it has four vicinal cysteine pairs [].; GO: 0003677 DNA binding, 0045892 negative regulation of transcription, DNA-dependent, 0046685 response to arsenic-containing substance; PDB: 3MWH_A 3KGK_A 3KTB_B.

>PRK14294 chaperone protein DnaJ; Provisional

Probab=86.47  E-value=0.71  Score=44.80  Aligned_cols=49  Identities=24%  Similarity=0.624  Sum_probs=32.2

Q ss_pred             CCCCCCCccce------EeCCCCCCcceeeeCCCC--cceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVRF------VPCGNCSGSRKVFDEADG--VPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~rf------VpC~~C~GS~Kv~~~~~~--~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+.      ..|+.|+|.-.+....+.  ....|+.|+-.|.+   .|+.|.
T Consensus       145 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~  204 (366)
T PRK14294        145 ETCEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIVSPCKTCH  204 (366)
T ss_pred             ccCCCCCCccccCCCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecCcCCCCCC
Confidence            46777776553      568888888765432211  25678888888865   677774

>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain

Probab=86.00  E-value=5.2  Score=31.68  Aligned_cols=56  Identities=13%  Similarity=0.314  Sum_probs=37.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHH-------hCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE--eCCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFR-------GFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF--IRGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~-------~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF--I~G~~I  198 (277)
                      ||.|.++||      +.|+....+|+       ..++.+..+|++.++.    +.+..|-  .++|.++  .+|+.+
T Consensus        28 lV~F~a~wC------~~C~~~~p~~~~l~~~~~~~~v~~~~vd~d~~~~----l~~~~~V--~~~Pt~~i~~~g~~~   92 (111)
T cd02963          28 LIKITSDWC------FSCIHIEPVWKEVIQELEPLGVGIATVNAGHERR----LARKLGA--HSVPAIVGIINGQVT   92 (111)
T ss_pred             EEEEECCcc------HhHHHhhHHHHHHHHHHHhcCceEEEEeccccHH----HHHHcCC--ccCCEEEEEECCEEE
Confidence            556677765      79986665543       2357888888887643    4455554  7899874  688755

DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.

>PRK14296 chaperone protein DnaJ; Provisional

Probab=85.94  E-value=0.72  Score=44.98  Aligned_cols=49  Identities=31%  Similarity=0.735  Sum_probs=32.7

Q ss_pred             CCCCCCCccce------EeCCCCCCcceeeeCCC-C-----cceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVRF------VPCGNCSGSRKVFDEAD-G-----VPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~rf------VpC~~C~GS~Kv~~~~~-~-----~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+.      ..|+.|+|+-.+..... +     ....|+.|+--|-+   .|+.|.
T Consensus       150 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~  213 (372)
T PRK14296        150 TNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCK  213 (372)
T ss_pred             eccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCC
Confidence            46777877654      45999999876643221 1     13578888888865   488774

>PRK14295 chaperone protein DnaJ; Provisional

Probab=85.77  E-value=0.73  Score=45.19  Aligned_cols=49  Identities=31%  Similarity=0.737  Sum_probs=31.5

Q ss_pred             CCCCCCCccce------EeCCCCCCcceeeeCCCC--cceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVRF------VPCGNCSGSRKVFDEADG--VPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~rf------VpC~~C~GS~Kv~~~~~~--~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+.      ..|+.|+|+-.+.....+  ...+|+.|+-.|.+   +|+.|.
T Consensus       167 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~  226 (389)
T PRK14295        167 APCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCK  226 (389)
T ss_pred             ccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEeccCCCCCC
Confidence            46777766543      568888888665443211  24678888888865   477774

>cd02959 ERp19 Endoplasmic reticulum protein 19 (ERp19) family; ERp19 is also known as ERp18, a protein located in the ER containing one redox active TRX domain

Probab=85.67  E-value=1.5  Score=35.56  Aligned_cols=60  Identities=15%  Similarity=0.209  Sum_probs=35.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE-Ee--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV-FI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV-FI--~G~~IG  199 (277)
                      +|.|+++||      ++|+.....+..      ....|..+|++.+.+...   +..+.....+|.+ |+  +|+.++
T Consensus        23 lV~F~a~WC------~~C~~~~~~~~~~~~~~~~~~~fv~v~vd~~~~~~~---~~~~~~g~~vPt~~f~~~~Gk~~~   91 (117)
T cd02959          23 MLLIHKTWC------GACKALKPKFAESKEISELSHNFVMVNLEDDEEPKD---EEFSPDGGYIPRILFLDPSGDVHP   91 (117)
T ss_pred             EEEEeCCcC------HHHHHHHHHHhhhHHHHhhcCcEEEEEecCCCCchh---hhcccCCCccceEEEECCCCCCch
Confidence            444666665      799988777766      345688888887643221   2232211348988 45  455433

Denaturation studies indicate that the reduced form is more stable than the oxidized form, suggesting that the protein is involved in disulfide bond formation. In vitro, ERp19 has been shown to possess thiol-disulfide oxidase activity which is dependent on the presence of both active site cysteines. Although described as protein disulfide isomerase (PDI)-like, the protein does not complement for PDI activity. ERp19 shows a wide tissue distribution but is most abundant in liver, testis, heart and kidney.

>PRK14291 chaperone protein DnaJ; Provisional

Probab=85.61  E-value=0.78  Score=44.81  Aligned_cols=50  Identities=24%  Similarity=0.736  Sum_probs=34.5

Q ss_pred             CCCCCCCCccc------eEeCCCCCCcceeeeCCCC--cceeCCCCCcCcee--eCCCCC
Q 048504          226 GFVCGSCGDVR------FVPCGNCSGSRKVFDEADG--VPKRCLECNENGLI--RCPDCC  275 (277)
Q Consensus       226 ~~~C~~CGg~r------fVpC~~C~GS~Kv~~~~~~--~~~rC~~CNEnGLv--rCp~C~  275 (277)
                      ...|..|.|.+      ...|+.|+|+-.+......  ....|+.|+--|.+  .|+.|.
T Consensus       156 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~C~~C~  215 (382)
T PRK14291        156 YVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGVLREPCSKCN  215 (382)
T ss_pred             eccCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceEEccCCCCCC
Confidence            35788887765      4669999999776543211  24689999888855  477774

>PRK14301 chaperone protein DnaJ; Provisional

Probab=85.53  E-value=0.73  Score=44.90  Aligned_cols=49  Identities=29%  Similarity=0.764  Sum_probs=30.8

Q ss_pred             CCCCCCCccce------EeCCCCCCcceeeeCCC--CcceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVRF------VPCGNCSGSRKVFDEAD--GVPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~rf------VpC~~C~GS~Kv~~~~~--~~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+.      ..|+.|+|+-.+....+  .....|+.|+-.|.+   .|+.|.
T Consensus       145 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~  204 (373)
T PRK14301        145 VTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVITHPCPKCK  204 (373)
T ss_pred             ccCCCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecCCCCCCCC
Confidence            46777766553      55888888766543221  124678888877754   577774

>PRK14292 chaperone protein DnaJ; Provisional

Probab=85.32  E-value=0.77  Score=44.50  Aligned_cols=49  Identities=31%  Similarity=0.657  Sum_probs=34.4

Q ss_pred             CCCCCCCccc-------eEeCCCCCCcceeeeCC---CC---cceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVR-------FVPCGNCSGSRKVFDEA---DG---VPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~r-------fVpC~~C~GS~Kv~~~~---~~---~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+       ...|..|+|+-.+....   .+   ....|+.|+-.|.+   +|+.|.
T Consensus       140 ~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~  204 (371)
T PRK14292        140 TECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCR  204 (371)
T ss_pred             ecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCC
Confidence            5788887765       46799999997664321   01   13589999999976   688884

>PRK14296 chaperone protein DnaJ; Provisional

Probab=84.97  E-value=0.86  Score=44.46  Aligned_cols=37  Identities=27%  Similarity=0.814  Sum_probs=29.4

Q ss_pred             CCCCCCCccceE---------------eCCCCCCcceeeeCCCCcceeCCCCCcCcee
Q 048504          227 FVCGSCGDVRFV---------------PCGNCSGSRKVFDEADGVPKRCLECNENGLI  269 (277)
Q Consensus       227 ~~C~~CGg~rfV---------------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLv  269 (277)
                      ..|..|+|.+.+               +|+.|+|.-++..      ..|+.|+-.|.+
T Consensus       167 ~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~------~~C~~C~G~g~v  218 (372)
T PRK14296        167 HICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIK------NKCKNCKGKGKY  218 (372)
T ss_pred             ccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeec------ccccCCCCceEE
Confidence            579999988654               7999999987753      459999988865

>PRK14280 chaperone protein DnaJ; Provisional

Probab=84.78  E-value=0.95  Score=44.13  Aligned_cols=50  Identities=30%  Similarity=0.686  Sum_probs=32.9

Q ss_pred             CCCCCCCCccc------eEeCCCCCCcceeeeCCC------CcceeCCCCCcCcee---eCCCCC
Q 048504          226 GFVCGSCGDVR------FVPCGNCSGSRKVFDEAD------GVPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       226 ~~~C~~CGg~r------fVpC~~C~GS~Kv~~~~~------~~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ...|..|.|.+      ...|+.|+|+-.+.....      .....|+.|+-.|.+   +|+.|.
T Consensus       143 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~  207 (376)
T PRK14280        143 EETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCH  207 (376)
T ss_pred             eccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCC
Confidence            35788887765      456888888866543211      124578888888865   577774

>PRK14288 chaperone protein DnaJ; Provisional

Probab=84.74  E-value=0.88  Score=44.28  Aligned_cols=49  Identities=31%  Similarity=0.692  Sum_probs=27.1

Q ss_pred             CCCCCCCccce-----EeCCCCCCcceeeeCCCC--cceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVRF-----VPCGNCSGSRKVFDEADG--VPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~rf-----VpC~~C~GS~Kv~~~~~~--~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+.     ..|+.|+|.-.+....+.  ....|+.|+-.|.+   .|+.|.
T Consensus       141 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~  199 (369)
T PRK14288        141 SVCESCDGTGAKDKALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIKTPCQACK  199 (369)
T ss_pred             ccCCCCCCcccCCCCCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEccccCccCC
Confidence            36666666542     447777777655432211  13467777776643   466663

>PRK10542 glutathionine S-transferase; Provisional

Probab=84.64  E-value=2.6  Score=35.93  Aligned_cols=59  Identities=8%  Similarity=0.093  Sum_probs=40.9

Q ss_pred             hHHHHHHHHHhCCCeEEEEECCCCHH---HHHHHHHHhCCCCCCCcEEEe-CCEEEechhHHHHH
Q 048504          147 DCYAVRMIFRGFRVWVDERDVSMDSA---YKKELQCVFGGKNVTLPQVFI-RGKHVGNADVLKSM  207 (277)
Q Consensus       147 ~C~~Vk~iL~~~gV~y~ErDVs~d~~---~reELke~lG~~~~tvPqVFI-~G~~IGG~del~~L  207 (277)
                      .+.+++.+|+.+||+|+.+.|+....   ..+++.++...  ..+|.+-+ ||..|-....+.+.
T Consensus        10 ~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~--g~vPvL~~~~g~~l~eS~aI~~Y   72 (201)
T PRK10542         10 CSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPK--GQVPALLLDDGTLLTEGVAIMQY   72 (201)
T ss_pred             HHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcC--CCCCeEEeCCCcEeecHHHHHHH
Confidence            56788999999999998876654321   22456666543  68999976 66666666555553

>PRK14297 chaperone protein DnaJ; Provisional

Probab=84.35  E-value=0.89  Score=44.32  Aligned_cols=50  Identities=20%  Similarity=0.564  Sum_probs=33.7

Q ss_pred             CCCCCCCCccce------EeCCCCCCcceeeeCC------CCcceeCCCCCcCcee---eCCCCC
Q 048504          226 GFVCGSCGDVRF------VPCGNCSGSRKVFDEA------DGVPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       226 ~~~C~~CGg~rf------VpC~~C~GS~Kv~~~~------~~~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ...|..|.|.+.      ..|+.|+|.-++....      .....+|+.|+-.|.+   +|+.|.
T Consensus       148 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~  212 (380)
T PRK14297        148 NENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCH  212 (380)
T ss_pred             eccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCC
Confidence            357888877653      5699999987654321      0125688899888865   688774

>PF07315 DUF1462: Protein of unknown function (DUF1462); InterPro: IPR009190 There are currently no experimental data for members of this group of bacterial proteins or their homologues

Probab=84.29  E-value=5  Score=32.51  Aligned_cols=52  Identities=10%  Similarity=0.008  Sum_probs=31.8

Q ss_pred             HHHHHHHHh--------CCCeEEEEECCCCHH--HHHHHHHHhCCCCCCCcEEEeCCEEEec
Q 048504          149 YAVRMIFRG--------FRVWVDERDVSMDSA--YKKELQCVFGGKNVTLPQVFIRGKHVGN  200 (277)
Q Consensus       149 ~~Vk~iL~~--------~gV~y~ErDVs~d~~--~reELke~lG~~~~tvPqVFI~G~~IGG  200 (277)
                      +..-.+|+.        ..+.|..+||...++  ..+++.++.-...--.|.|.|+|++||.
T Consensus        19 keTyeWL~aal~RKyp~~~f~~~YiDi~~p~~~~~~~~~a~~I~ede~fYPlV~i~~eiV~E   80 (93)
T PF07315_consen   19 KETYEWLEAALKRKYPDQPFEFTYIDIENPPENDHDQQFAERILEDELFYPLVVINDEIVAE   80 (93)
T ss_dssp             HHHHHHHHHHHHHH-TTS-EEEEEEETTT----HHHHHHHHHHHTTSS-SSEEEETTEEEEE
T ss_pred             hhHHHHHHHHHhCcCCCCceEEEEEecCCCCccHHHHHHHHHHHhcccccceEEECCEEEec
Confidence            456666654        346688999976543  3444544432223668999999999974

A crystal structure of Q7A6J8 from SWISSPROT revealed a thioredoxin-like fold, its core consisting of three layers alpha/beta/alpha.; PDB: 1XG8_A.

>cd03001 PDI_a_P5 PDIa family, P5 subfamily; composed of eukaryotic proteins similar to human P5, a PDI-related protein with a domain structure of aa'b (where a and a' are redox active TRX domains and b is a redox inactive TRX-like domain)

Probab=84.28  E-value=5.4  Score=29.99  Aligned_cols=50  Identities=16%  Similarity=0.241  Sum_probs=33.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF  192 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF  192 (277)
                      +++|.+++      |+.|+.....|..      ..+.+..+|++.+.+    +.+.++-  ..+|.++
T Consensus        22 lv~f~a~~------C~~C~~~~~~~~~~~~~~~~~~~~~~id~~~~~~----~~~~~~i--~~~P~~~   77 (103)
T cd03001          22 LVEFYAPW------CGHCKNLAPEWKKAAKALKGIVKVGAVDADVHQS----LAQQYGV--RGFPTIK   77 (103)
T ss_pred             EEEEECCC------CHHHHHHhHHHHHHHHHhcCCceEEEEECcchHH----HHHHCCC--CccCEEE
Confidence            44555554      5799988777754      246778888876643    4455554  6799873

Like PDI, P5 is located in the endoplasmic reticulum (ER) and displays both isomerase and chaperone activities, which are independent of each other. Compared to PDI, the isomerase and chaperone activities of P5 are lower. The first cysteine in the CXXC motif of both redox active domains in P5 is necessary for isomerase activity. The P5 gene was first isolated as an amplified gene from a hydroxyurea-resistant hamster cell line. The zebrafish P5 homolog has been implicated to play a critical role in establishing left/right asymmetries in the embryonic midline. Some members of this subfamily are P5-like proteins containing only one redox active TRX domain.

>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]

Probab=84.26  E-value=1.2  Score=48.15  Aligned_cols=61  Identities=23%  Similarity=0.469  Sum_probs=41.3

Q ss_pred             CCCCCCCcEEEeCCEEEechhHHHHHHhhccHHHHhcCCCCCC-----CCCCCCCCCccce------------EeCCCCC
Q 048504          182 GGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQ-----PGFVCGSCGDVRF------------VPCGNCS  244 (277)
Q Consensus       182 G~~~~tvPqVFI~G~~IGG~del~~L~EsGeL~klL~~~~~~~-----~~~~C~~CGg~rf------------VpC~~C~  244 (277)
                      |...++=|.-     |+|=+|++++|...=. +....++.+..     +++.|+.|.|.++            |||+.|+
T Consensus       687 GRTpRSNPAT-----Ytg~Fd~IR~lFA~tp-eAK~rGyk~grFSFNvkGGRCe~C~GdG~ikIeM~FLpdVyv~CevC~  760 (935)
T COG0178         687 GRTPRSNPAT-----YTGVFDDIRELFAGTP-EAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEVCH  760 (935)
T ss_pred             CCCCCCCccc-----hhcchHHHHHHHhcCh-HHHHcCCCcccccccCCCcCCccccCCceEEEEeccCCCceeeCCCcC
Confidence            4334566665     8889999999875433 33344444322     4679999998764            6799999


Q ss_pred             Ccce
Q 048504          245 GSRK  248 (277)
Q Consensus       245 GS~K  248 (277)
                      |.+-
T Consensus       761 GkRY  764 (935)
T COG0178         761 GKRY  764 (935)
T ss_pred             Cccc
Confidence            9764

>PRK14293 chaperone protein DnaJ; Provisional

Probab=84.25  E-value=0.89  Score=44.23  Aligned_cols=49  Identities=27%  Similarity=0.687  Sum_probs=34.1

Q ss_pred             CCCCCCCccc------eEeCCCCCCcceeeeCCC---C---cceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVR------FVPCGNCSGSRKVFDEAD---G---VPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~r------fVpC~~C~GS~Kv~~~~~---~---~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+      ...|+.|+|.-.+.....   +   ...+|+.|+-.|-+   +|+.|.
T Consensus       144 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~  207 (374)
T PRK14293        144 ETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACG  207 (374)
T ss_pred             ccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCC
Confidence            5677776654      356999999977643210   1   24689999999977   677774

>PRK14278 chaperone protein DnaJ; Provisional

Probab=84.08  E-value=1.1  Score=43.76  Aligned_cols=49  Identities=27%  Similarity=0.730  Sum_probs=30.9

Q ss_pred             CCCCCCCccc------eEeCCCCCCcceeeeCCC---C---cceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVR------FVPCGNCSGSRKVFDEAD---G---VPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~r------fVpC~~C~GS~Kv~~~~~---~---~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+      ...|+.|+|+-.+.....   +   ....|+.|+-.|-+   +|+.|.
T Consensus       140 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~  203 (378)
T PRK14278        140 VLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECA  203 (378)
T ss_pred             ccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCC
Confidence            4677777654      356888888866543210   0   14578888877754   577774

>PRK14276 chaperone protein DnaJ; Provisional

Probab=84.00  E-value=0.96  Score=44.14  Aligned_cols=50  Identities=26%  Similarity=0.624  Sum_probs=31.9

Q ss_pred             CCCCCCCCccce------EeCCCCCCcceeeeCCC------CcceeCCCCCcCcee---eCCCCC
Q 048504          226 GFVCGSCGDVRF------VPCGNCSGSRKVFDEAD------GVPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       226 ~~~C~~CGg~rf------VpC~~C~GS~Kv~~~~~------~~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ...|..|.|.+.      ..|+.|+|+-.+.....      .....|+.|+-.|-+   +|+.|.
T Consensus       146 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~  210 (380)
T PRK14276        146 EATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCH  210 (380)
T ss_pred             cccCCCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCC
Confidence            357888877653      56888888866543210      124578888877754   577774

>PLN00410 U5 snRNP protein, DIM1 family; Provisional

Probab=83.98  E-value=6.6  Score=33.73  Aligned_cols=55  Identities=7%  Similarity=0.179  Sum_probs=36.1

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----C-CeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE-Ee-CCE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----R-VWVDERDVSMDSAYKKELQCVFGGKNVTLPQV-FI-RGK  196 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----g-V~y~ErDVs~d~~~reELke~lG~~~~tvPqV-FI-~G~  196 (277)
                      ||-|+.+||      +.|+.+-.+|+..     + +.+..+||+..+++    .+..+-. ..+|.+ |. +|+
T Consensus        27 VvdF~A~WC------gpCk~m~p~l~~la~~~~~~~~~~kVDVDe~~dl----a~~y~I~-~~~t~~~ffk~g~   89 (142)
T PLN00410         27 VIRFGHDWD------ETCMQMDEVLASVAETIKNFAVIYLVDITEVPDF----NTMYELY-DPCTVMFFFRNKH   89 (142)
T ss_pred             EEEEECCCC------hhHHHHHHHHHHHHHHcCCceEEEEEECCCCHHH----HHHcCcc-CCCcEEEEEECCe
Confidence            556777776      5999998888763     2 55688999988654    4445431 245666 44 444

>cd02948 TRX_NDPK TRX domain, TRX and NDP-kinase (NDPK) fusion protein family; most members of this group are fusion proteins which contain one redox active TRX domain containing a CXXC motif and three NDPK domains, and are characterized as intermediate chains (ICs) of axonemal outer arm dynein

Probab=83.84  E-value=6.5  Score=30.48  Aligned_cols=54  Identities=15%  Similarity=0.252  Sum_probs=34.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C---CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F---RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKH  197 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~---gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~  197 (277)
                      ||.|+++||      +.|+.+...|+.    +   .+.|..+|++ ++    ++.+.++-  ..+|.+  |-+|+.
T Consensus        21 vv~F~a~wC------~~Ck~~~p~l~~~~~~~~~~~~~~~~vd~d-~~----~~~~~~~v--~~~Pt~~~~~~g~~   83 (102)
T cd02948          21 VVDVYQEWC------GPCKAVVSLFKKIKNELGDDLLHFATAEAD-TI----DTLKRYRG--KCEPTFLFYKNGEL   83 (102)
T ss_pred             EEEEECCcC------HhHHHHhHHHHHHHHHcCCCcEEEEEEeCC-CH----HHHHHcCC--CcCcEEEEEECCEE
Confidence            556666665      799988777754    3   2567777777 33    34455554  678865  457764

Dyneins are molecular motors that generate force against microtubules to produce cellular movement, and are divided into two classes: axonemal and cytoplasmic. They are supramolecular complexes consisting of three protein groups classified according to size: dynein heavy, intermediate and light chains. Axonemal dyneins form two structures, the inner and outer arms, which are attached to doublet microtubules throughout the cilia and flagella. The human homolog is the sperm-specific Sptrx-2, presumed to be a component of the human sperm axoneme architecture. Included in this group is another human protein, TRX-like protein 2, a smaller fusion protein containing one TRX and one NDPK domain, which

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=83.74  E-value=0.83  Score=30.43  Aligned_cols=29  Identities=31%  Similarity=0.772  Sum_probs=23.0

Q ss_pred             eEeCCCCCCcceeeeC---CCCcceeCCCCCc
Q 048504          237 FVPCGNCSGSRKVFDE---ADGVPKRCLECNE  265 (277)
Q Consensus       237 fVpC~~C~GS~Kv~~~---~~~~~~rC~~CNE  265 (277)
                      .|.|++|+....+-++   ..+..++|+.|.+
T Consensus         2 ~i~Cp~C~~~y~i~d~~ip~~g~~v~C~~C~~   33 (36)
T PF13717_consen    2 IITCPNCQAKYEIDDEKIPPKGRKVRCSKCGH   33 (36)
T ss_pred             EEECCCCCCEEeCCHHHCCCCCcEEECCCCCC
Confidence            3679999999888654   4567899999975

>PRK14288 chaperone protein DnaJ; Provisional

Probab=83.15  E-value=1.3  Score=43.15  Aligned_cols=38  Identities=29%  Similarity=0.721  Sum_probs=30.1

Q ss_pred             CCCCCCCccceE-----------eCCCCCCcceeeeCCCCcceeCCCCCcCceee
Q 048504          227 FVCGSCGDVRFV-----------PCGNCSGSRKVFDEADGVPKRCLECNENGLIR  270 (277)
Q Consensus       227 ~~C~~CGg~rfV-----------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLvr  270 (277)
                      ..|..|+|.+.+           +|+.|+|.-++..      ..|+.|+-.|.++
T Consensus       157 ~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------~~C~~C~G~g~v~  205 (369)
T PRK14288        157 ETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIK------TPCQACKGKTYIL  205 (369)
T ss_pred             cCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEcc------ccCccCCCcceEE
Confidence            579999998865           5999999988753      3499999888763

>PRK14280 chaperone protein DnaJ; Provisional

Probab=83.03  E-value=1.3  Score=43.26  Aligned_cols=37  Identities=27%  Similarity=0.810  Sum_probs=29.5

Q ss_pred             CCCCCCCccceE---------------eCCCCCCcceeeeCCCCcceeCCCCCcCcee
Q 048504          227 FVCGSCGDVRFV---------------PCGNCSGSRKVFDEADGVPKRCLECNENGLI  269 (277)
Q Consensus       227 ~~C~~CGg~rfV---------------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLv  269 (277)
                      ..|..|+|.+.+               +|+.|+|.-+++.      ..|+.|+-.|.+
T Consensus       161 ~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------~~C~~C~G~g~v  212 (376)
T PRK14280        161 ETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIK------EKCPTCHGKGKV  212 (376)
T ss_pred             ccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceec------CCCCCCCCceEE
Confidence            579999987653               6999999977653      459999988876

>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione

Probab=83.03  E-value=9.8  Score=28.13  Aligned_cols=59  Identities=10%  Similarity=0.070  Sum_probs=41.2

Q ss_pred             hHHHHHHHHHhCCCeEEEEECCC--CHHHHHHHHHHhCCCCCCCcEEEeC-CEEEechhHHHH
Q 048504          147 DCYAVRMIFRGFRVWVDERDVSM--DSAYKKELQCVFGGKNVTLPQVFIR-GKHVGNADVLKS  206 (277)
Q Consensus       147 ~C~~Vk~iL~~~gV~y~ErDVs~--d~~~reELke~lG~~~~tvPqVFI~-G~~IGG~del~~  206 (277)
                      .+..++.+|+..||+|+.+-++.  .....+++.+..-. ...+|.+-++ |..|-..-.+.+
T Consensus        11 ~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~-~g~vP~l~~~~~~~l~es~AI~~   72 (76)
T PF02798_consen   11 RSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPM-FGKVPALEDGDGFVLTESNAILR   72 (76)
T ss_dssp             TTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTT-SSSSSEEEETTTEEEESHHHHHH
T ss_pred             chHHHHHHHHHhcccCceEEEecccccccchhhhhcccc-cceeeEEEECCCCEEEcHHHHHH
Confidence            77999999999999998776654  33334677766532 1579999999 888876655544

The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....

>PRK14285 chaperone protein DnaJ; Provisional

Probab=82.98  E-value=1.1  Score=43.43  Aligned_cols=38  Identities=26%  Similarity=0.767  Sum_probs=29.7

Q ss_pred             CCCCCCCccceE-----------eCCCCCCcceeeeCCCCcceeCCCCCcCceee
Q 048504          227 FVCGSCGDVRFV-----------PCGNCSGSRKVFDEADGVPKRCLECNENGLIR  270 (277)
Q Consensus       227 ~~C~~CGg~rfV-----------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLvr  270 (277)
                      ..|..|.|.+.+           +|+.|+|.-++..      ..|..|+-.|.++
T Consensus       164 ~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~------~~C~~C~G~g~v~  212 (365)
T PRK14285        164 SICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIIS------NPCKSCKGKGSLK  212 (365)
T ss_pred             ccCCCccCceeEEecCceeEEeeecCCCCCcccccC------CCCCCCCCCCEEe
Confidence            479999987654           7999999977753      4699999888763

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=82.86  E-value=1.1  Score=44.66  Aligned_cols=49  Identities=31%  Similarity=0.788  Sum_probs=29.4

Q ss_pred             CCCCCCCccc-----eEeCCCCCCcceeeeCC-CC-----cceeCCCCCcCcee-----eCCCCC
Q 048504          227 FVCGSCGDVR-----FVPCGNCSGSRKVFDEA-DG-----VPKRCLECNENGLI-----RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~r-----fVpC~~C~GS~Kv~~~~-~~-----~~~rC~~CNEnGLv-----rCp~C~  275 (277)
                      ..|..|.|.+     ...|+.|+|+-.++... -+     ....|+.|+--|-+     +|+.|.
T Consensus       151 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~~~C~~C~  215 (421)
T PTZ00037        151 VICANCEGHGGPKDAFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCS  215 (421)
T ss_pred             ccccccCCCCCCCCCCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccccccCCcCC
Confidence            4666665554     34588888886543211 11     23478888877765     477774

>cd03005 PDI_a_ERp46 PDIa family, endoplasmic reticulum protein 46 (ERp46) subfamily; ERp46 is an ER-resident protein containing three redox active TRX domains

Probab=82.84  E-value=4  Score=30.66  Aligned_cols=56  Identities=16%  Similarity=0.285  Sum_probs=34.9

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhC---------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE--eCCEE
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGF---------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF--IRGKH  197 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~---------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF--I~G~~  197 (277)
                      -++.|.++||      +.|+.....|+..         .+.+..+|.+.+.    .+.+..+-  ..+|.++  -+|+.
T Consensus        19 ~lv~f~a~wC------~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~----~~~~~~~v--~~~Pt~~~~~~g~~   85 (102)
T cd03005          19 HFVKFFAPWC------GHCKRLAPTWEQLAKKFNNENPSVKIAKVDCTQHR----ELCSEFQV--RGYPTLLLFKDGEK   85 (102)
T ss_pred             EEEEEECCCC------HHHHHhCHHHHHHHHHHhccCCcEEEEEEECCCCh----hhHhhcCC--CcCCEEEEEeCCCe
Confidence            3556666664      7999776655432         4667788887665    33444543  6899864  46643

Yeast complementation studies show that ERp46 can substitute for protein disulfide isomerase (PDI) function in vivo. It has been detected in many tissues, however, transcript and protein levels do not correlate in all tissues, suggesting regulation at a posttranscriptional level. An identical protein, named endoPDI, has been identified as an endothelial PDI that is highly expressed in the endothelium of tumors and hypoxic lesions. It has a protective effect on cells exposed to hypoxia.

>PRK14281 chaperone protein DnaJ; Provisional

Probab=82.75  E-value=1.2  Score=43.84  Aligned_cols=49  Identities=29%  Similarity=0.702  Sum_probs=30.7

Q ss_pred             CCCCCCCccce-----EeCCCCCCcceeeeCCC------CcceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVRF-----VPCGNCSGSRKVFDEAD------GVPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~rf-----VpC~~C~GS~Kv~~~~~------~~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+.     ..|+.|+|+-.+.....      .....|+.|+-.|.+   +|+.|.
T Consensus       164 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~  226 (397)
T PRK14281        164 VPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACY  226 (397)
T ss_pred             ecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCC
Confidence            46776666543     45888888876543210      124578888888864   577774

>PRK14282 chaperone protein DnaJ; Provisional

Probab=82.60  E-value=1.9  Score=41.95  Aligned_cols=38  Identities=32%  Similarity=0.786  Sum_probs=30.2

Q ss_pred             CCCCCCCccceE---------------eCCCCCCcceeeeCCCCcceeCCCCCcCceee
Q 048504          227 FVCGSCGDVRFV---------------PCGNCSGSRKVFDEADGVPKRCLECNENGLIR  270 (277)
Q Consensus       227 ~~C~~CGg~rfV---------------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLvr  270 (277)
                      ..|..|+|.+.+               +|+.|+|.-++..      ..|..|+..|.+.
T Consensus       170 ~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------~~C~~C~G~g~v~  222 (369)
T PRK14282        170 VTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPG------EYCHECGGSGRIR  222 (369)
T ss_pred             cCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCC------CCCCCCCCceeEE
Confidence            579999988654               6999999987743      4599999988764

>cd02999 PDI_a_ERp44_like PDIa family, endoplasmic reticulum protein 44 (ERp44)-like subfamily; composed of uncharacterized PDI-like eukaryotic proteins containing only one redox active TRX (a) domain with a CXXS motif, similar to ERp44

Probab=82.36  E-value=4.8  Score=31.45  Aligned_cols=51  Identities=18%  Similarity=0.265  Sum_probs=34.5

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECC-CCHHHHHHHHHHhCCCCCCCcEEE
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVS-MDSAYKKELQCVFGGKNVTLPQVF  192 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs-~d~~~reELke~lG~~~~tvPqVF  192 (277)
                      -||.|.++||      +.|+...-.|+.+     ++.+..+|.+ .++    ++.+.++-  ..+|.++
T Consensus        21 vlV~F~a~WC------~~C~~~~p~l~~la~~~~~~~~~~vd~~~~~~----~l~~~~~V--~~~PT~~   77 (100)
T cd02999          21 TAVLFYASWC------PFSASFRPHFNALSSMFPQIRHLAIEESSIKP----SLLSRYGV--VGFPTIL   77 (100)
T ss_pred             EEEEEECCCC------HHHHhHhHHHHHHHHHhccCceEEEECCCCCH----HHHHhcCC--eecCEEE
Confidence            4666777775      6999888777653     4667777776 443    45555654  7899874

CXXS is still a redox active motif; however, the mixed disulfide formed with the substrate is more stable than those formed by CXXC motif proteins. PDI-related proteins are usually involved in the oxidative protein folding in the ER by acting as catalysts and folding assistants. ERp44 is involved in thiol-mediated retention in the ER.

>PRK14279 chaperone protein DnaJ; Provisional

Probab=82.35  E-value=1.4  Score=43.37  Aligned_cols=49  Identities=27%  Similarity=0.692  Sum_probs=28.7

Q ss_pred             CCCCCCCccce------EeCCCCCCcceeeeCCC--CcceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVRF------VPCGNCSGSRKVFDEAD--GVPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~rf------VpC~~C~GS~Kv~~~~~--~~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+.      ..|+.|+|+-.+.....  .....|+.|+-.|.+   +|+.|.
T Consensus       174 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~  233 (392)
T PRK14279        174 APCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECK  233 (392)
T ss_pred             ccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEeCCcCCCCC
Confidence            46777766553      45777777766543221  124677777777754   466663

>PRK14284 chaperone protein DnaJ; Provisional

Probab=82.31  E-value=1.5  Score=42.98  Aligned_cols=37  Identities=30%  Similarity=0.715  Sum_probs=29.4

Q ss_pred             CCCCCCCccce-----------EeCCCCCCcceeeeCCCCcceeCCCCCcCcee
Q 048504          227 FVCGSCGDVRF-----------VPCGNCSGSRKVFDEADGVPKRCLECNENGLI  269 (277)
Q Consensus       227 ~~C~~CGg~rf-----------VpC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLv  269 (277)
                      ..|..|+|.+.           .+|+.|+|.-+++.      ..|+.|+-.|.+
T Consensus       176 ~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~------~~C~~C~G~g~v  223 (391)
T PRK14284        176 KVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVIT------DPCSVCRGQGRI  223 (391)
T ss_pred             eecCccCCeeEEEEEeceEEEEEECCCCCCCCcccC------CcCCCCCCccee
Confidence            57999998876           47999999976643      459999988876

>PRK14279 chaperone protein DnaJ; Provisional

Probab=82.23  E-value=1.2  Score=43.68  Aligned_cols=38  Identities=29%  Similarity=0.892  Sum_probs=30.6

Q ss_pred             CCCCCCCccceE-----------eCCCCCCcceeeeCCCCcceeCCCCCcCceee
Q 048504          227 FVCGSCGDVRFV-----------PCGNCSGSRKVFDEADGVPKRCLECNENGLIR  270 (277)
Q Consensus       227 ~~C~~CGg~rfV-----------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLvr  270 (277)
                      ..|..|.|.+.+           +|+.|+|.-++..      .+|..|+-.|.++
T Consensus       191 ~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~------~~C~~C~G~g~v~  239 (392)
T PRK14279        191 KVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIE------DPCEECKGTGVTT  239 (392)
T ss_pred             CCCCCCcceEEEEEEecceEEEEecCCCCceeEEeC------CcCCCCCCCeEEE
Confidence            579999998764           6999999988753      4599999888764

>PRK14277 chaperone protein DnaJ; Provisional

Probab=82.21  E-value=1.3  Score=43.38  Aligned_cols=49  Identities=27%  Similarity=0.590  Sum_probs=30.1

Q ss_pred             CCCCCCCccc------eEeCCCCCCcceeeeCCC------CcceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVR------FVPCGNCSGSRKVFDEAD------GVPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~r------fVpC~~C~GS~Kv~~~~~------~~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+      ...|+.|+|+-.+.....      .....|+.|+-.|.+   +|+.|.
T Consensus       156 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~  219 (386)
T PRK14277        156 EKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCG  219 (386)
T ss_pred             ccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCC
Confidence            4666666544      456888888866543210      013578888887765   477774

>cd02998 PDI_a_ERp38 PDIa family, endoplasmic reticulum protein 38 (ERp38) subfamily; composed of proteins similar to the P5-like protein first isolated from alfalfa, which contains two redox active TRX (a) domains at the N-terminus, like human P5, and a C-terminal domain with homology to the C-terminal domain of ERp29, unlike human P5

Probab=82.06  E-value=4.9  Score=30.09  Aligned_cols=51  Identities=16%  Similarity=0.313  Sum_probs=33.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C----CCeEEEEECCC-CHHHHHHHHHHhCCCCCCCcEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F----RVWVDERDVSM-DSAYKKELQCVFGGKNVTLPQVFI  193 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~----gV~y~ErDVs~-d~~~reELke~lG~~~~tvPqVFI  193 (277)
                      |+.|++++      |+.|+....+|+.    +    ++.+..+|.+. ++.    +.+.++-  ..+|.+++
T Consensus        22 ~v~f~a~~------C~~C~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~----~~~~~~i--~~~P~~~~   81 (105)
T cd02998          22 LVEFYAPW------CGHCKNLAPEYEKLAAVFANEDDVVIAKVDADEANKD----LAKKYGV--SGFPTLKF   81 (105)
T ss_pred             EEEEECCC------CHHHHhhChHHHHHHHHhCCCCCEEEEEEECCCcchh----hHHhCCC--CCcCEEEE
Confidence            55666665      5899877777654    2    36677888877 543    3444554  68998854

The cDNA clone of this protein (named G1) was isolated from an alfalfa cDNA library by screening with human protein disulfide isomerase (PDI) cDNA. The G1 protein is constitutively expressed in all major organs of the plant and its expression is induced by treatment with tunicamycin, indicating that it may be a glucose-regulated protein. The G1 homolog in the eukaryotic social amoeba Dictyostelium discoideum is also described as a P5-like protein, which is located in the endoplasmic reticulum (ER) despite the absence of an ER-retrieval signal. G1 homologs from Aspergillus niger and Neurospora crassa have also been characterized, and are named TIGA and ER

>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]

Probab=82.05  E-value=2.1  Score=40.81  Aligned_cols=68  Identities=19%  Similarity=0.346  Sum_probs=49.0

Q ss_pred             CcEEEEEec-CCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          129 DRIVVYLTS-LRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       129 ~kVVLYttS-lcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      +-|.||.=+ ...+...-|+|-++.-+|+..+|+|+.+|-.+        +.+...  .++|-|-+||++|-+.+-+..
T Consensus        44 D~VYLyQF~R~~~~PnLSPfClKvEt~lR~~~IpYE~~~~~~--------~~rSr~--G~lPFIELNGe~iaDS~~I~~  112 (281)
T KOG4244|consen   44 DTVYLYQFPRTKTCPNLSPFCLKVETFLRAYDIPYEIVDCSL--------KRRSRN--GTLPFIELNGEHIADSDLIED  112 (281)
T ss_pred             CeEEEEeccccCCCCCCChHHHHHHHHHHHhCCCceeccccc--------eeeccC--CCcceEEeCCeeccccHHHHH
Confidence            345566432 22223445899999999999999999998764        222222  589999999999999877654

>PRK14301 chaperone protein DnaJ; Provisional

Probab=81.96  E-value=1.3  Score=43.16  Aligned_cols=38  Identities=32%  Similarity=0.872  Sum_probs=29.9

Q ss_pred             CCCCCCCccceE-----------eCCCCCCcceeeeCCCCcceeCCCCCcCceee
Q 048504          227 FVCGSCGDVRFV-----------PCGNCSGSRKVFDEADGVPKRCLECNENGLIR  270 (277)
Q Consensus       227 ~~C~~CGg~rfV-----------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLvr  270 (277)
                      ..|..|.|.+.+           +|+.|+|.-++..      ..|+.|+-.|.++
T Consensus       162 ~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~------~~C~~C~G~g~v~  210 (373)
T PRK14301        162 ETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVIT------HPCPKCKGSGIVQ  210 (373)
T ss_pred             cccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecC------CCCCCCCCCceec
Confidence            579999988654           7999999988753      4599999888763

>PF13901 DUF4206: Domain of unknown function (DUF4206)

Probab=81.84  E-value=0.28  Score=44.05  Aligned_cols=87  Identities=20%  Similarity=0.408  Sum_probs=62.8

Q ss_pred             CCcEEEeCCEEEechhHHHHHHhhccHHHHhcCCCCC--CCCCCCCCCCccceEeCCCCCCcceeeeCCCCcceeCCCCC
Q 048504          187 TLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRR--QPGFVCGSCGDVRFVPCGNCSGSRKVFDEADGVPKRCLECN  264 (277)
Q Consensus       187 tvPqVFI~G~~IGG~del~~L~EsGeL~klL~~~~~~--~~~~~C~~CGg~rfVpC~~C~GS~Kv~~~~~~~~~rC~~CN  264 (277)
                      ..|.-+++..++=-..||.++. +|.|.+.|+.+-..  ..-..|+-|-+.+| .|.-|+.+.-+|-=+.....+|+.|+
T Consensus       102 ~~~~hl~~~~~~YSl~DL~~v~-~G~L~~~L~~l~~~~~~HV~~C~lC~~kGf-iCe~C~~~~~IfPF~~~~~~~C~~C~  179 (202)
T PF13901_consen  102 QPRDHLLEDPHLYSLADLVQVK-SGQLLPQLEKLVQFAEKHVYSCELCQQKGF-ICEICNSDDIIFPFQIDTTVRCPKCK  179 (202)
T ss_pred             cchhhhhhCCceEcHHHHHHHh-hchHHHHHHHHHHHHHHHHHHhHHHHhCCC-CCccCCCCCCCCCCCCCCeeeCCcCc
Confidence            5577778887888889999885 88999988764322  12348999999998 79999999666543444689999987


Q ss_pred             cCc------eeeCCCCC
Q 048504          265 ENG------LIRCPDCC  275 (277)
Q Consensus       265 EnG------LvrCp~C~  275 (277)
                      --=      -..||.|.
T Consensus       180 ~v~H~~C~~~~~CpkC~  196 (202)
T PF13901_consen  180 SVFHKSCFRKKSCPKCA  196 (202)
T ss_pred             cccchhhcCCCCCCCcH
Confidence            421      15577774

>PF10865 DUF2703: Domain of unknown function (DUF2703); InterPro: IPR021219 This family of protein has no known function

Probab=81.78  E-value=7.9  Score=32.55  Aligned_cols=67  Identities=22%  Similarity=0.422  Sum_probs=40.5

Q ss_pred             CCCChhHH-----------HHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHHhh
Q 048504          142 RRTFEDCY-----------AVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYET  210 (277)
Q Consensus       142 R~Tc~~C~-----------~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~Es  210 (277)
                      .+||+.|.           .++..|..+||.+....+.++.+   ++...    ...-|.|.|||+.             
T Consensus        12 g~tC~RC~~Tg~~L~~av~~l~~~L~~~Giev~l~~~~l~~~---~~~~~----~~~S~~I~inG~p-------------   71 (120)
T PF10865_consen   12 GKTCERCGDTGETLREAVKELAPVLAPLGIEVRLEEIELDEE---EFARQ----PLESPTIRINGRP-------------   71 (120)
T ss_pred             CCcCCchhhHHHHHHHHHHHHHHHHHhCCcEEEEEEEECChH---HHhhc----ccCCCeeeECCEe-------------
Confidence            36888886           45556777888754444433332   21111    1578999999995             


Q ss_pred             ccHHHHhcCCCCCCCCCCCCCCC
Q 048504          211 GELARVLDGFPRRQPGFVCGSCG  233 (277)
Q Consensus       211 GeL~klL~~~~~~~~~~~C~~CG  233 (277)
                        |+.+| ++..  ....|+.||
T Consensus        72 --iE~~l-~~~v--~~s~C~~c~   89 (120)
T PF10865_consen   72 --IEDLL-GAEV--GESPCESCG   89 (120)
T ss_pred             --hhHhh-CCcc--ccCcccccc
Confidence              66777 3332  235777666

>PRK14283 chaperone protein DnaJ; Provisional

Probab=81.77  E-value=1.3  Score=43.08  Aligned_cols=49  Identities=27%  Similarity=0.668  Sum_probs=33.8

Q ss_pred             CCCCCCCccc------eEeCCCCCCcceeeeCCC------CcceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVR------FVPCGNCSGSRKVFDEAD------GVPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~r------fVpC~~C~GS~Kv~~~~~------~~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+      ...|+.|+|+-.+.....      .....|+.|+-.|.+   .|..|.
T Consensus       147 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~  210 (378)
T PRK14283        147 KKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCH  210 (378)
T ss_pred             ccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCC
Confidence            4677776643      456999999977653211      124689999999876   788885

>PRK14286 chaperone protein DnaJ; Provisional

Probab=81.73  E-value=1.5  Score=42.70  Aligned_cols=38  Identities=29%  Similarity=0.767  Sum_probs=30.6

Q ss_pred             CCCCCCCccceE-----------eCCCCCCcceeeeCCCCcceeCCCCCcCceee
Q 048504          227 FVCGSCGDVRFV-----------PCGNCSGSRKVFDEADGVPKRCLECNENGLIR  270 (277)
Q Consensus       227 ~~C~~CGg~rfV-----------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLvr  270 (277)
                      ..|..|.|.+.+           +|+.|+|.-++..      .+|..|+-.|.++
T Consensus       168 ~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~------~~C~~C~G~g~~~  216 (372)
T PRK14286        168 TTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVIS------NPCKTCGGQGLQE  216 (372)
T ss_pred             ccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEec------ccCCCCCCCcEEe
Confidence            579999988754           6999999988753      3599999888775

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=81.61  E-value=1.5  Score=43.79  Aligned_cols=40  Identities=28%  Similarity=0.786  Sum_probs=31.5

Q ss_pred             CCCCCCCccce---------------EeCCCCCCcceeeeCCCCcceeCCCCCcCceee
Q 048504          227 FVCGSCGDVRF---------------VPCGNCSGSRKVFDEADGVPKRCLECNENGLIR  270 (277)
Q Consensus       227 ~~C~~CGg~rf---------------VpC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLvr  270 (277)
                      ..|..|+|.+.               .+|+.|+|.-+++..    ..+|..|+-.|.++
T Consensus       167 ~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~----~~~C~~C~G~g~v~  221 (421)
T PTZ00037        167 VDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPE----SKKCKNCSGKGVKK  221 (421)
T ss_pred             ccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccc----cccCCcCCCcceee
Confidence            57999988763               379999999887763    35699999988775

>TIGR00595 priA primosomal protein N'

Probab=81.49  E-value=1.4  Score=44.63  Aligned_cols=47  Identities=32%  Similarity=0.695  Sum_probs=36.7

Q ss_pred             CCCCCCCCccceEeCCCCCCcceeeeCCCCcceeCCCCCcCc--eeeCCCCCC
Q 048504          226 GFVCGSCGDVRFVPCGNCSGSRKVFDEADGVPKRCLECNENG--LIRCPDCCS  276 (277)
Q Consensus       226 ~~~C~~CGg~rfVpC~~C~GS~Kv~~~~~~~~~rC~~CNEnG--LvrCp~C~~  276 (277)
                      ...|..||-.  +.|+.|+++...+..  ...++|..|+-.-  -.+||.|-+
T Consensus       213 ~~~C~~Cg~~--~~C~~C~~~l~~h~~--~~~l~Ch~Cg~~~~~~~~Cp~C~s  261 (505)
T TIGR00595       213 NLLCRSCGYI--LCCPNCDVSLTYHKK--EGKLRCHYCGYQEPIPKTCPQCGS  261 (505)
T ss_pred             eeEhhhCcCc--cCCCCCCCceEEecC--CCeEEcCCCcCcCCCCCCCCCCCC
Confidence            4589999964  679999999766653  3479999998765  458999975

All proteins in this family for which functions are known are components of the primosome which is involved in replication, repair, and recombination.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PRK14290 chaperone protein DnaJ; Provisional

Probab=81.26  E-value=1.6  Score=42.35  Aligned_cols=38  Identities=24%  Similarity=0.735  Sum_probs=29.4

Q ss_pred             CCCCCCCccce---------------EeCCCCCCcceeeeCCCCcceeCCCCCcCceee
Q 048504          227 FVCGSCGDVRF---------------VPCGNCSGSRKVFDEADGVPKRCLECNENGLIR  270 (277)
Q Consensus       227 ~~C~~CGg~rf---------------VpC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLvr  270 (277)
                      ..|..|+|.+.               .+|+.|+|.-++.      ..+|+.|+-.|.++
T Consensus       166 ~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~------~~~C~~C~G~g~v~  218 (365)
T PRK14290        166 ITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIP------EEKCPRCNGTGTVV  218 (365)
T ss_pred             ccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEc------cCCCCCCCCceeEE
Confidence            57999988774               4799999997763      35699999888753

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=81.16  E-value=1.8  Score=31.97  Aligned_cols=37  Identities=30%  Similarity=0.757  Sum_probs=25.2

Q ss_pred             CCCCCCCCccceE---------------eCCCCCCcceeeeCCCCcceeCCCCCcCc
Q 048504          226 GFVCGSCGDVRFV---------------PCGNCSGSRKVFDEADGVPKRCLECNENG  267 (277)
Q Consensus       226 ~~~C~~CGg~rfV---------------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnG  267 (277)
                      ...|..|.|.+++               +|+.|+|+-+++ +    ..+|+.|+-+|
T Consensus        15 ~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i-~----~~~C~~C~G~g   66 (66)
T PF00684_consen   15 PKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKII-E----KDPCKTCKGSG   66 (66)
T ss_dssp             -EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE--T----SSB-SSSTTSS
T ss_pred             CcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEE-C----CCCCCCCCCcC
Confidence            3589999988665               499999998887 3    36799998654

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>PRK14276 chaperone protein DnaJ; Provisional

Probab=81.09  E-value=1.4  Score=42.92  Aligned_cols=38  Identities=29%  Similarity=0.771  Sum_probs=29.8

Q ss_pred             CCCCCCCccce---------------EeCCCCCCcceeeeCCCCcceeCCCCCcCceee
Q 048504          227 FVCGSCGDVRF---------------VPCGNCSGSRKVFDEADGVPKRCLECNENGLIR  270 (277)
Q Consensus       227 ~~C~~CGg~rf---------------VpC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLvr  270 (277)
                      ..|..|+|.+.               .+|+.|+|.-++..      .+|..|+-.|.+.
T Consensus       164 ~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------~~C~~C~G~g~~~  216 (380)
T PRK14276        164 VTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIK------EPCQTCHGTGHEK  216 (380)
T ss_pred             ccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCcccc------CCCCCCCCceEEE
Confidence            57999998754               36999999977753      4599999888763

>PRK14278 chaperone protein DnaJ; Provisional

Probab=81.06  E-value=1.6  Score=42.70  Aligned_cols=38  Identities=34%  Similarity=0.867  Sum_probs=29.9

Q ss_pred             CCCCCCCccce---------------EeCCCCCCcceeeeCCCCcceeCCCCCcCceee
Q 048504          227 FVCGSCGDVRF---------------VPCGNCSGSRKVFDEADGVPKRCLECNENGLIR  270 (277)
Q Consensus       227 ~~C~~CGg~rf---------------VpC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLvr  270 (277)
                      ..|..|.|.+.               .+|+.|+|.-+++.      .+|+.|+-.|.+.
T Consensus       157 ~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------~~C~~C~G~g~v~  209 (378)
T PRK14278        157 VTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIP------DPCHECAGDGRVR  209 (378)
T ss_pred             eecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeC------CCCCCCCCceeEe
Confidence            47999998754               36999999988753      3599999988763

>PRK14277 chaperone protein DnaJ; Provisional

Probab=81.04  E-value=1.6  Score=42.62  Aligned_cols=37  Identities=30%  Similarity=0.763  Sum_probs=29.9

Q ss_pred             CCCCCCCccceE---------------eCCCCCCcceeeeCCCCcceeCCCCCcCcee
Q 048504          227 FVCGSCGDVRFV---------------PCGNCSGSRKVFDEADGVPKRCLECNENGLI  269 (277)
Q Consensus       227 ~~C~~CGg~rfV---------------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLv  269 (277)
                      ..|..|+|.+.+               +|+.|+|.-+++.      .+|..|+-.|.+
T Consensus       173 ~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------~~C~~C~G~g~v  224 (386)
T PRK14277        173 VTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIIT------DPCNKCGGTGRI  224 (386)
T ss_pred             ccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeecc------CCCCCCCCCcEE
Confidence            579999988653               6999999988753      359999998876

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=80.89  E-value=1.3  Score=43.16  Aligned_cols=50  Identities=28%  Similarity=0.654  Sum_probs=37.0

Q ss_pred             CCCCCCCCccceE-----eCCCCCCcceeeeC-------CCCcceeCCCCCcCcee-----eCCCCC
Q 048504          226 GFVCGSCGDVRFV-----PCGNCSGSRKVFDE-------ADGVPKRCLECNENGLI-----RCPDCC  275 (277)
Q Consensus       226 ~~~C~~CGg~rfV-----pC~~C~GS~Kv~~~-------~~~~~~rC~~CNEnGLv-----rCp~C~  275 (277)
                      ...|..|-|.++-     +|+.|.|+.-....       .....++|..||..|-+     +|+.|.
T Consensus       127 ~~iCs~C~GsGgksg~~~~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~  193 (337)
T KOG0712|consen  127 NFICSKCSGSGGKSGSAPKCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCS  193 (337)
T ss_pred             CccCCcCCCCCCCCCCCCCCCCCCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccc
Confidence            4678888666543     39999999654211       12348999999999999     999995

>PRK14873 primosome assembly protein PriA; Provisional

Probab=80.44  E-value=2  Score=45.27  Aligned_cols=48  Identities=31%  Similarity=0.758  Sum_probs=37.0

Q ss_pred             CCCCCCCCCccceEeCCCCCCcceeeeCCCCcceeCCCCCcCc-eeeCCCCCC
Q 048504          225 PGFVCGSCGDVRFVPCGNCSGSRKVFDEADGVPKRCLECNENG-LIRCPDCCS  276 (277)
Q Consensus       225 ~~~~C~~CGg~rfVpC~~C~GS~Kv~~~~~~~~~rC~~CNEnG-LvrCp~C~~  276 (277)
                      +.-.|..||-  -+.|+.|+++...+..  ...++|..|+-.- -.+||.|-+
T Consensus       382 p~l~C~~Cg~--~~~C~~C~~~L~~h~~--~~~l~Ch~CG~~~~p~~Cp~Cgs  430 (665)
T PRK14873        382 PSLACARCRT--PARCRHCTGPLGLPSA--GGTPRCRWCGRAAPDWRCPRCGS  430 (665)
T ss_pred             CeeEhhhCcC--eeECCCCCCceeEecC--CCeeECCCCcCCCcCccCCCCcC
Confidence            3458999985  4789999999776543  3489999998643 458999975

>PRK14289 chaperone protein DnaJ; Provisional

Probab=80.42  E-value=2.3  Score=41.46  Aligned_cols=39  Identities=28%  Similarity=0.783  Sum_probs=29.6

Q ss_pred             CCCCCCCCccceE---------------eCCCCCCcceeeeCCCCcceeCCCCCcCceee
Q 048504          226 GFVCGSCGDVRFV---------------PCGNCSGSRKVFDEADGVPKRCLECNENGLIR  270 (277)
Q Consensus       226 ~~~C~~CGg~rfV---------------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLvr  270 (277)
                      ...|..|.|.+.+               +|+.|+|.-++.      ..+|..|+-.|.+.
T Consensus       171 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~------~~~C~~C~G~g~v~  224 (386)
T PRK14289        171 SETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKII------KKKCKKCGGEGIVY  224 (386)
T ss_pred             CCcCCCCcCeEEEEEEEecccceEEEEEecCCCCcccccc------CcCCCCCCCCcEEe
Confidence            3679999887554               699999996654      35699999888763

>PRK10767 chaperone protein DnaJ; Provisional

Probab=80.38  E-value=1.8  Score=42.00  Aligned_cols=38  Identities=26%  Similarity=0.736  Sum_probs=29.8

Q ss_pred             CCCCCCCccceE-----------eCCCCCCcceeeeCCCCcceeCCCCCcCceee
Q 048504          227 FVCGSCGDVRFV-----------PCGNCSGSRKVFDEADGVPKRCLECNENGLIR  270 (277)
Q Consensus       227 ~~C~~CGg~rfV-----------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLvr  270 (277)
                      ..|..|+|.+.+           +|+.|+|.-++..      .+|..|+-.|.++
T Consensus       160 ~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------~~C~~C~G~g~v~  208 (371)
T PRK10767        160 KTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIK------DPCKKCHGQGRVE  208 (371)
T ss_pred             ccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECC------CCCCCCCCCceEe
Confidence            479999988765           5999999987643      4599999888763

>PRK14297 chaperone protein DnaJ; Provisional

Probab=80.35  E-value=1.8  Score=42.27  Aligned_cols=37  Identities=32%  Similarity=0.884  Sum_probs=29.7

Q ss_pred             CCCCCCCccceE---------------eCCCCCCcceeeeCCCCcceeCCCCCcCcee
Q 048504          227 FVCGSCGDVRFV---------------PCGNCSGSRKVFDEADGVPKRCLECNENGLI  269 (277)
Q Consensus       227 ~~C~~CGg~rfV---------------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLv  269 (277)
                      ..|..|.|.+.+               +|+.|+|.-++..      ..|..|+-.|.+
T Consensus       166 ~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------~~C~~C~G~g~v  217 (380)
T PRK14297        166 KTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIE------DPCNKCHGKGKV  217 (380)
T ss_pred             ccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcC------CCCCCCCCCeEE
Confidence            579999988654               6999999987753      459999988865

>PRK14294 chaperone protein DnaJ; Provisional

Probab=80.04  E-value=1.8  Score=42.08  Aligned_cols=37  Identities=32%  Similarity=0.757  Sum_probs=29.1

Q ss_pred             CCCCCCCccceE-----------eCCCCCCcceeeeCCCCcceeCCCCCcCcee
Q 048504          227 FVCGSCGDVRFV-----------PCGNCSGSRKVFDEADGVPKRCLECNENGLI  269 (277)
Q Consensus       227 ~~C~~CGg~rfV-----------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLv  269 (277)
                      ..|..|.|.+.+           +|+.|+|.-++..      ..|..|+-.|.+
T Consensus       162 ~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~------~~C~~C~G~g~v  209 (366)
T PRK14294        162 TTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIV------SPCKTCHGQGRV  209 (366)
T ss_pred             ccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecC------cCCCCCCCceEe
Confidence            479999888654           6999999987753      459999988876

>PF14595 Thioredoxin_9: Thioredoxin; PDB: 1Z6N_A

Probab=80.03  E-value=0.91  Score=37.95  Aligned_cols=63  Identities=13%  Similarity=0.092  Sum_probs=31.6

Q ss_pred             ccCCCCCCcEEEEEecCCCCCCCChhHHHH----HHHHHhC-CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe
Q 048504          122 IRLPGTEDRIVVYLTSLRGIRRTFEDCYAV----RMIFRGF-RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI  193 (277)
Q Consensus       122 i~~~~~~~kVVLYttSlcgiR~Tc~~C~~V----k~iL~~~-gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI  193 (277)
                      +......-.|+|++.+||      +||...    .++++.. +|++..+..+.+.+..+.+.. .|  ...+|.+++
T Consensus        36 l~~~~~~~~ilvi~e~WC------gD~~~~vP~l~kiae~~p~i~~~~i~rd~~~el~~~~lt-~g--~~~IP~~I~  103 (129)
T PF14595_consen   36 LKSIQKPYNILVITETWC------GDCARNVPVLAKIAEANPNIEVRIILRDENKELMDQYLT-NG--GRSIPTFIF  103 (129)
T ss_dssp             HHT--S-EEEEEE--TT-------HHHHHHHHHHHHHHHH-TTEEEEEE-HHHHHHHTTTTTT--S--S--SSEEEE
T ss_pred             HHhcCCCcEEEEEECCCc------hhHHHHHHHHHHHHHhCCCCeEEEEEecCChhHHHHHHh-CC--CeecCEEEE
Confidence            344444567999999997      699854    4555555 677766655544443332222 23  378999854

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	277
1t1v_A	93	SH3BGRL3, SH3 domain-binding glutamic acid-rich pr	6e-27
1u6t_A	121	SH3 domain-binding glutamic acid-rich-like protein	1e-22
2ct6_A	111	SH3 domain-binding glutamic acid-rich-like protein	3e-21
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-09
2khp_A	92	Glutaredoxin; thioredoxin type domain, ssgcid, ele	2e-07
3qmx_A	99	Glutaredoxin A, glutaredoxin 3; electron transport	3e-07
1fov_A	82	Glutaredoxin 3, GRX3; active site disulfide, CIS P	3e-07
1wik_A	109	Thioredoxin-like protein 2; picot homology 2 domai	6e-07
2wem_A	118	Glutaredoxin-related protein 5; chromosome 14 open	6e-07
2yan_A	105	Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {H	6e-07
3ipz_A	109	Monothiol glutaredoxin-S14, chloroplastic; electro	7e-07
2e7p_A	116	Glutaredoxin; thioredoxin fold, poplar, electron t	9e-07
3gx8_A	121	Monothiol glutaredoxin-5, mitochondrial; TRX fold,	1e-06
2wci_A	135	Glutaredoxin-4; redox-active center, iron-sulfur c	2e-06
1kte_A	105	Thioltransferase; redox-active center, electron tr	2e-06
3zyw_A	111	Glutaredoxin-3; metal binding protein; 1.84A {Homo	2e-06
3c1r_A	118	Glutaredoxin-1; oxidized form, oxidoreductase, cyt	3e-06
3l4n_A	127	Monothiol glutaredoxin-6; C-terminal domain of GRX	4e-06
3h8q_A	114	Thioredoxin reductase 3; oxidoreductase, structura	7e-06
3rhb_A	113	ATGRXC5, glutaredoxin-C5, chloroplastic; thioredox	1e-05
2cq9_A	130	GLRX2 protein, glutaredoxin 2; glutathione-S-trans	1e-05
2jad_A	362	Yellow fluorescent protein glutaredoxin fusion pro	1e-05
1ego_A	85	Glutaredoxin; electron transport; NMR {Escherichia	1e-05
2ht9_A	146	Glutaredoxin-2; thioredoxin fold, iron-sulfur clus	2e-05
3ctg_A	129	Glutaredoxin-2; reduced form, electron transport,	3e-05
2hze_A	114	Glutaredoxin-1; thioredoxin fold, arsenic, dimethy	4e-05
2klx_A	89	Glutaredoxin; thioredoxin type domain, ssgcid, ele	3e-04

>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A Length = 93

 Score = 99.9 bits (249), Expect = 6e-27
 Identities = 23/89 (25%), Positives = 37/89 (41%)

Query: 129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTL 188
             + VY TS+ G R        V  I  G R+     D+S D+A + E++ + G    T 
Sbjct: 2   SGLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPKATP 61

Query: 189 PQVFIRGKHVGNADVLKSMYETGELARVL 217
           PQ+     + G+ ++     E   L   L
Sbjct: 62  PQIVNGNHYCGDYELFVEAVEQDTLQEFL 90

>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A Length = 121

 Score = 89.3 bits (221), Expect = 1e-22
 Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 6/102 (5%)

Query: 131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGK------ 184
           I VY+ S  G     +    V       ++  +E+D++ +   +K ++            
Sbjct: 2   IRVYIASSSGSTAIKKKQQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPATG 61

Query: 185 NVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPG 226
               PQ+F   ++ G+ D      E   +   L         
Sbjct: 62  YPLPPQIFNESQYRGDYDAFFEARENNAVYAFLGLTAPPGSK 103

>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 111

 Score = 85.4 bits (211), Expect = 3e-21
 Identities = 17/102 (16%), Positives = 35/102 (34%), Gaps = 6/102 (5%)

Query: 131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGK------ 184
           I V++ S  G     +    V       ++  +E D++M    ++ +      +      
Sbjct: 10  IRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQG 69

Query: 185 NVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPG 226
           N   PQ+F   ++ G+ D      E+  +   L        G
Sbjct: 70  NPLPPQIFNGDRYCGDYDSFFESKESNTVFSFLGLKSGPSSG 111

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.2 bits (132), Expect = 9e-09
 Identities = 51/264 (19%), Positives = 80/264 (30%), Gaps = 73/264 (27%)

Query: 42  NYASLNRAASSNKFYNSMESVLAASNSFKGKVKQLRNLFE-----PKKSSKKIN------ 90
           N+  +N     +K    +ES L           + R +F+     P   S  I       
Sbjct: 346 NWKHVN----CDKLTTIIESSLNVLEP-----AEYRKMFDRLSVFPP--SAHIPTILLSL 394

Query: 91  --LNEPESPQQHHLIKLTKPVKSLSLCYNNESSIRLPGTEDRIVVYLTSLRGIRRTFEDC 148
              +  +S     + KL K   SL      ES+I +P     + V L +   + R+  D 
Sbjct: 395 IWFDVIKSDVMVVVNKLHK--YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDH 452

Query: 149 YAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY 208
           Y +    + F    D     +D  Y       +           I G H+ N +      
Sbjct: 453 YNIP---KTFDSD-DLIPPYLDQ-Y------FYS---------HI-GHHLKNIE----HP 487

Query: 209 ETGELARVL-------------DGFPRRQPGFVCGSCGDVRFVP---CGNCSG-SRKVFD 251
           E   L R++             D       G +  +   ++F     C N     R V  
Sbjct: 488 ERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNA 547

Query: 252 EADGVPKRCLECNENGLIRCPDCC 275
             D +PK      EN LI      
Sbjct: 548 ILDFLPK----IEEN-LICSKYTD 566

>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis} Length = 92

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 148 CYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM 207
           C   + +        +E D S     + E+Q   G    T PQ+FI   HVG  D L ++
Sbjct: 19  CARAKALLARKGAEFNEIDASATPELRAEMQERSGRN--TFPQIFIGSVHVGGCDDLYAL 76

Query: 208 YETGELARVL 217
            + G+L  +L
Sbjct: 77  EDEGKLDSLL 86

>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} Length = 99

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 148 CYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM 207
           C     + +   V   E  +  D+  ++ +     GK  +LPQ+FI  +H+G  D + ++
Sbjct: 29  CMRALALLKRKGVEFQEYCIDGDNEAREAMAARANGKR-SLPQIFIDDQHIGGCDDIYAL 87

Query: 208 YETGELARVL 217
              G+L  +L
Sbjct: 88  DGAGKLDPLL 97

>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A* Length = 82

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 148 CYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM 207
           C+  + +     V   E  +  ++A ++E+    G    T+PQ+FI  +H+G  D L ++
Sbjct: 14  CHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGRT--TVPQIFIDAQHIGGYDDLYAL 71

Query: 208 YETGELARVL 217
              G L  +L
Sbjct: 72  DARGGLDPLL 81

>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1 Length = 109

 Score = 46.1 bits (110), Expect = 6e-07
 Identities = 14/33 (42%), Positives = 22/33 (66%)

Query: 187 TLPQVFIRGKHVGNADVLKSMYETGELARVLDG 219
           T PQ+++RG  VG  D++K + + GEL  +L G
Sbjct: 70  TYPQLYVRGDLVGGLDIVKELKDNGELLPILKG 102

>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens} Length = 105

 Score = 46.1 bits (110), Expect = 6e-07
 Identities = 14/33 (42%), Positives = 23/33 (69%)

Query: 187 TLPQVFIRGKHVGNADVLKSMYETGELARVLDG 219
           T PQ++++G+ VG  D++K + E GEL  +L G
Sbjct: 72  TYPQLYVKGELVGGLDIVKELKENGELLPILRG 104

>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} Length = 109

 Score = 46.1 bits (110), Expect = 7e-07
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 187 TLPQVFIRGKHVGNADVLKSMYETGELARVLD 218
           T PQ++I G+  G  D+    ++TGEL   ++
Sbjct: 73  TFPQLYIGGEFFGGCDITLEAFKTGELQEEVE 104

>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A Length = 116

 Score = 45.7 bits (109), Expect = 9e-07
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 148 CYAVRMIFRGFRV---WVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVL 204
           C  V+ +          V+  ++S  S  +  L    G    T+P VFI GK +G  D +
Sbjct: 33  CNRVKQLLTQVGASYKVVELDELSDGSQLQSALAHWTGRG--TVPNVFIGGKQIGGCDTV 90

Query: 205 KSMYETGELARVL 217
              ++  EL  +L
Sbjct: 91  VEKHQRNELLPLL 103

>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae} Length = 121

 Score = 45.8 bits (109), Expect = 1e-06
 Identities = 13/32 (40%), Positives = 23/32 (71%)

Query: 187 TLPQVFIRGKHVGNADVLKSMYETGELARVLD 218
           T+PQ+++  + +G  DV+ SM  +GELA +L+
Sbjct: 74  TIPQLYVNKEFIGGCDVITSMARSGELADLLE 105

>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A Length = 135

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 12/32 (37%), Positives = 22/32 (68%)

Query: 187 TLPQVFIRGKHVGNADVLKSMYETGELARVLD 218
           T PQ+++ G+ VG  D++  MY+ GEL +++ 
Sbjct: 90  TFPQLWVDGELVGGCDIVIEMYQRGELQQLIK 121

>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A* Length = 105

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 6/75 (8%)

Query: 148 CYAVRMIFRGFRVW-----VDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNAD 202
           C   + +              +   + D+   ++      G   T+P+VFI  + +G   
Sbjct: 25  CRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGAR-TVPRVFIGKECIGGCT 83

Query: 203 VLKSMYETGELARVL 217
            L+SM++ GEL   L
Sbjct: 84  DLESMHKRGELLTRL 98

>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens} Length = 111

 Score = 44.6 bits (106), Expect = 2e-06
 Identities = 9/32 (28%), Positives = 19/32 (59%)

Query: 187 TLPQVFIRGKHVGNADVLKSMYETGELARVLD 218
           T PQ+++ G+ +G  D++K +  + EL  +  
Sbjct: 71  TYPQLYVSGELIGGLDIIKELEASEELDTICP 102

>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A* Length = 118

 Score = 44.6 bits (106), Expect = 3e-06
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)

Query: 160 VWVDERDVSMD-SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVL 217
           V V + +   + +  +  L  + G +  T+P ++I GKH+G  D L+ + ETGEL  +L
Sbjct: 56  VLVLQLNDMKEGADIQAALYEINGQR--TVPNIYINGKHIGGNDDLQELRETGELEELL 112

>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae} Length = 127

 Score = 44.3 bits (105), Expect = 4e-06
 Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 6/75 (8%)

Query: 148 CYAVRMIFR-----GFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNAD 202
              ++ +           ++ E D        +E   +  G+  T+P + + G   G  +
Sbjct: 27  SKGMKELLENEYQFIPNYYIIELDKHGHGEELQEYIKLVTGRG-TVPNLLVNGVSRGGNE 85

Query: 203 VLKSMYETGELARVL 217
            +K ++  G+L   L
Sbjct: 86  EIKKLHTQGKLLESL 100

>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} Length = 114

 Score = 43.0 bits (102), Expect = 7e-06
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 148 CYAVRMIFR--GFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLK 205
              V+ +F   G    V E D   D A  +E+      +  T+P +F+   HVG  D   
Sbjct: 30  STRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQK-TVPNIFVNKVHVGGCDQTF 88

Query: 206 SMYETGELARVL 217
             Y++G L ++L
Sbjct: 89  QAYQSGLLQKLL 100

>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A* Length = 113

 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%)

Query: 148 CYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVF---GGKNVTLPQVFIRGKHVGNADVL 204
           C  V+ +F+   V     ++        +LQ V     G++ T+P VF+ GKH+G     
Sbjct: 32  CTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQH-TVPNVFVCGKHIGGCTDT 90

Query: 205 KSMYETGELARVL 217
             +   G+L  +L
Sbjct: 91  VKLNRKGDLELML 103

>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 130

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 148 CYAVRMIFRGFRV--WVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLK 205
           C   + +F    V   V E D+       ++      G+  T+P++F+ G  +G A    
Sbjct: 40  CTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGER-TVPRIFVNGTFIGGATDTH 98

Query: 206 SMYETGELARVL 217
            +++ G+L  ++
Sbjct: 99  RLHKEGKLLPLV 110

>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria} Length = 362

 Score = 44.7 bits (105), Expect = 1e-05
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)

Query: 160 VWVDERDVSMD-SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVL 217
           V V + +   + +  +  L  + G +  T+P ++I GKH+G  D L+ + ETGEL  +L
Sbjct: 292 VLVLQLNDMKEGADIQAALYEINGQR--TVPNIYINGKHIGGNDDLQELRETGELEELL 348

>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A Length = 85

 Score = 41.9 bits (99), Expect = 1e-05
 Identities = 11/37 (29%), Positives = 20/37 (54%)

Query: 163 DERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVG 199
              D+  +   K++LQ   G    T+PQ+F+  +H+G
Sbjct: 34  QYVDIRAEGITKEDLQQKAGKPVETVPQIFVDQQHIG 70

>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A* Length = 146

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 148 CYAVRMIFRGFRV--WVDERDVSMD-SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVL 204
           C   + +F    V   V E D+    + ++  L  + G +  T+P++F+ G  +G A   
Sbjct: 62  CTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGER--TVPRIFVNGTFIGGATDT 119

Query: 205 KSMYETGELARVL 217
             +++ G+L  ++
Sbjct: 120 HRLHKEGKLLPLV 132

>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A* Length = 129

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 13/31 (41%), Positives = 22/31 (70%)

Query: 187 TLPQVFIRGKHVGNADVLKSMYETGELARVL 217
           T+P V+I GKH+G    L+++ + G+LA +L
Sbjct: 94  TVPNVYINGKHIGGNSDLETLKKNGKLAEIL 124

>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B Length = 114

 Score = 41.1 bits (97), Expect = 4e-05
 Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 161 WVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVL 217
            VD ++   ++  +   + + GGK  T+P++F     +G    L  +     L  +L
Sbjct: 51  IVDIKEFKPENELRDYFEQITGGK--TVPRIFFGKTSIGGYSDLLEIDNMDALGDIL 105

>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae} Length = 89

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 162 VDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVL 217
           V   D+   ++ ++E+     G+N T PQ+FI   HVG  D L ++   G+L  +L
Sbjct: 31  VKYTDIDASTSLRQEMVQRANGRN-TFPQIFIGDYHVGGCDDLYALENKGKLDSLL 85

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	277
2wul_A	118	Glutaredoxin related protein 5; chromosome 14 open	99.89
1u6t_A	121	SH3 domain-binding glutamic acid-rich-like protein	99.89
1t1v_A	93	SH3BGRL3, SH3 domain-binding glutamic acid-rich pr	99.88
3zyw_A	111	Glutaredoxin-3; metal binding protein; 1.84A {Homo	99.88
3ipz_A	109	Monothiol glutaredoxin-S14, chloroplastic; electro	99.87
3gx8_A	121	Monothiol glutaredoxin-5, mitochondrial; TRX fold,	99.86
2wem_A	118	Glutaredoxin-related protein 5; chromosome 14 open	99.86
2ct6_A	111	SH3 domain-binding glutamic acid-rich-like protein	99.85
1wik_A	109	Thioredoxin-like protein 2; picot homology 2 domai	99.84
2wci_A	135	Glutaredoxin-4; redox-active center, iron-sulfur c	99.84
3qmx_A	99	Glutaredoxin A, glutaredoxin 3; electron transport	99.82
3l4n_A	127	Monothiol glutaredoxin-6; C-terminal domain of GRX	99.82
3h8q_A	114	Thioredoxin reductase 3; oxidoreductase, structura	99.81
2yan_A	105	Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {H	99.81
3rhb_A	113	ATGRXC5, glutaredoxin-C5, chloroplastic; thioredox	99.8
3ctg_A	129	Glutaredoxin-2; reduced form, electron transport,	99.78
3c1r_A	118	Glutaredoxin-1; oxidized form, oxidoreductase, cyt	99.73
1aba_A	87	Glutaredoxin; electron transport; HET: MES; 1.45A	99.72
2khp_A	92	Glutaredoxin; thioredoxin type domain, ssgcid, ele	99.72
1kte_A	105	Thioltransferase; redox-active center, electron tr	99.71
1fov_A	82	Glutaredoxin 3, GRX3; active site disulfide, CIS P	99.71
2hze_A	114	Glutaredoxin-1; thioredoxin fold, arsenic, dimethy	99.7
2klx_A	89	Glutaredoxin; thioredoxin type domain, ssgcid, ele	99.69
2jad_A	362	Yellow fluorescent protein glutaredoxin fusion pro	99.67
2cq9_A	130	GLRX2 protein, glutaredoxin 2; glutathione-S-trans	99.64
2ht9_A	146	Glutaredoxin-2; thioredoxin fold, iron-sulfur clus	99.63
2lqo_A	92	Putative glutaredoxin RV3198.1/MT3292; TRX fold, o	99.58
3msz_A	89	Glutaredoxin 1; alpha-beta sandwich, center for st	99.56
1ego_A	85	Glutaredoxin; electron transport; NMR {Escherichia	99.45
2x8g_A	598	Thioredoxin glutathione reductase; redox-active ce	99.43
3nzn_A	103	Glutaredoxin; structural genomics, PSI2, MCSG, pro	99.38
1nm3_A	241	Protein HI0572; hybrid, peroxiredoxin, glutaredoxi	99.38
3ic4_A	92	Glutaredoxin (GRX-1); structural genomics, PSI, MC	99.36
2e7p_A	116	Glutaredoxin; thioredoxin fold, poplar, electron t	99.28
1h75_A	81	Glutaredoxin-like protein NRDH; electron transport	99.27
1r7h_A	75	NRDH-redoxin; thioredoxin, glutaredoxin, redox pro	99.23
1wjk_A	100	C330018D20RIK protein; glutaredoxin, thioredoxin f	98.95
2k8s_A	80	Thioredoxin; dimer, structural genomics, PSI-2, pr	98.95
1ttz_A	87	Conserved hypothetical protein; structural genomic	98.78
2fgx_A	107	Putative thioredoxin; NET3, NESG, GFT-glutaredoxin	98.68
1rw1_A	114	Conserved hypothetical protein YFFB; thioredoxin f	98.43
1z3e_A	132	Regulatory protein SPX; bacterial transcription re	98.4
2axo_A	270	Hypothetical protein ATU2684; alpha beta protein.,	98.37
2kok_A	120	Arsenate reductase; brucellosis, zoonotic, oxidore	98.35
3l78_A	120	Regulatory protein SPX; transcription, transcripti	97.82
1s3c_A	141	Arsenate reductase; ARSC, arsenite, oxidoreductase	97.79
3rdw_A	121	Putative arsenate reductase; structural genomics,	97.77
3gkx_A	120	Putative ARSC family related protein; ARSC family	97.74
3fz4_A	120	Putative arsenate reductase; APC61768, structural	97.69
1nho_A	85	Probable thioredoxin; beta sheet, alpha helix, oxi	97.66
3kp8_A	106	Vkorc1/thioredoxin domain protein; blood coagulati	97.53
1fo5_A	85	Thioredoxin; disulfide oxidoreductase, structural	97.44
3f0i_A	119	Arsenate reductase; structural genomics, IDP01300,	97.39
3ir4_A	218	Glutaredoxin 2; glutathione, IDP00895, structural	97.37
3kp9_A	291	Vkorc1/thioredoxin domain protein; warfarin, disul	97.28
3fy7_A	250	Chloride intracellular channel protein 3; GST, glu	97.09
2cz2_A	223	Maleylacetoacetate isomerase; structural genomics,	97.09
3vln_A	241	GSTO-1, glutathione S-transferase omega-1; GST fol	97.08
2r4v_A	247	XAP121, chloride intracellular channel protein 2;	97.05
2l6c_A	110	Thioredoxin; oxidoreductase; NMR {Desulfovibrio vu	97.01
1hyu_A	521	AHPF, alkyl hydroperoxide reductase subunit F; thi	97.01
1e6b_A	221	Glutathione S-transferase; 1.65A {Arabidopsis thal	97.0
2ahe_A	267	Chloride intracellular channel protein 4; glutathi	97.0
2hls_A	243	Protein disulfide oxidoreductase; thioredoxin fold	97.0
3qav_A	243	RHO-class glutathione S-transferase; cytosol; 2.10	96.94
3rbt_A	246	Glutathione transferase O1; glutathione S-transfer	96.93
1axd_A	209	Glutathione S-transferase I; transferase, herbicid	96.92
3lyp_A	215	Stringent starvation protein A; structural genomic	96.92
1k0m_A	241	CLIC1, NCC27, chloride intracellular channel prote	96.87
4hi7_A	228	GI20122; GST, glutathione S-transferase, enzyme fu	96.87
2v6k_A	214	Maleylpyruvate isomerase; glutathione-S-transferas	96.87
2a2r_A	210	Glutathione S-transferase P; detoxification, nitri	96.86
4hoj_A	210	REGF protein; GST, glutathione S-transferase, enzy	96.86
1zl9_A	207	GST class-sigma, glutathione S-transferase 5; glut	96.85
3q18_A	239	GSTO-2, glutathione S-transferase omega-2; glutath	96.84
1yy7_A	213	SSPA, stringent starvation protein A; GST fold, tr	96.83
3bby_A	215	Uncharacterized GST-like protein YFCF; NP_416804.1	96.82
1gnw_A	211	Glutathione S-transferase; herbicide detoxificatio	96.78
3lyk_A	216	Stringent starvation protein A homolog; structural	96.78
1aw9_A	216	Glutathione S-transferase III; herbicide detoxific	96.78
1pn9_A	209	GST class-delta, glutathione S-transferase 1-6; pr	96.77
2e0q_A	104	Thioredoxin; electron transport; 1.49A {Sulfolobus	96.77
2oe3_A	114	Thioredoxin-3; electron transport, alpha/beta sand	96.76
1v2a_A	210	Glutathione transferase GST1-6; glutathione S-tran	96.75
1okt_A	211	Glutathione S-transferase; GST; 1.9A {Plasmodium f	96.73
2cvd_A	198	Glutathione-requiring prostaglandin D synthase; gl	96.71
2on7_A	206	Nagst-1, Na glutathione S-transferase 1; hookworm;	96.7
1tw9_A	206	Glutathione S-transferase 2; 1.71A {Heligmosomoide	96.69
2on5_A	206	Nagst-2, Na glutathione S-transferase 2; hookworm;	96.68
1yq1_A	208	Glutathione S-transferase; nematoda, structural ge	96.68
1k0d_A	260	URE2 protein; nitrate assimilation, structural gen	96.68
2ws2_A	204	NU-class GST, glutathione S-transferase; parasite,	96.68
2imi_A	221	Epsilon-class glutathione S-transferase; HET: GSH;	96.67
1oyj_A	231	Glutathione S-transferase; herbicide detoxificatio	96.67
3lxz_A	229	Glutathione S-transferase family protein; structur	96.67
3n5o_A	235	Glutathione transferase; seattle structural genomi	96.66
4g10_A	265	Glutathione S-transferase homolog; thioredoxin fol	96.65
1ep7_A	112	Thioredoxin CH1, H-type; electron transport; 2.10A	96.62
3ay8_A	216	Glutathione S-transferase; GST fold, GST binding,	96.61
4iel_A	229	Glutathione S-transferase, N-terminal domain PROT;	96.61
2vo4_A	219	2,4-D inducible glutathione S-transferase; herbici	96.58
2c3n_A	247	Glutathione S-transferase theta 1; glutathione tra	96.58
1gwc_A	230	Glutathione S-transferase TSI-1; herbicide detoxif	96.55
2yzu_A	109	Thioredoxin; redox protein, electron transport, st	96.53
3m9j_A	105	Thioredoxin; oxidoreductase; 1.10A {Homo sapiens}	96.53
1syr_A	112	Thioredoxin; SGPP, structural genomics, PSI, prote	96.52
3m3m_A	210	Glutathione S-transferase; PSI-II, structural geno	96.5
1thx_A	115	Thioredoxin, thioredoxin 2; oxido-reductase, elect	96.46
1ljr_A	244	HGST T2-2, glutathione S-transferase; HET: GSH; 3.	96.46
1r5a_A	218	Glutathione transferase; glutathione S-transferase	96.45
2vm1_A	118	Thioredoxin, thioredoxin H isoform 1.; oxidoreduct	96.44
3ic8_A	310	Uncharacterized GST-like proteinprotein; glutathio	96.42
3ibh_A	233	GST-II, saccharomyces cerevisiae GTT2; glutathione	96.41
3f6d_A	219	Adgstd4-4, glutathione transferase GST1-4; HET: GT	96.4
2hnl_A	225	Glutathione S-transferase 1; prostaglandin synthas	96.4
1z9h_A	290	Membrane-associated prostaglandin E synthase-2; me	96.4
2yv7_A	260	CG10997-PA, LD46306P, CLIC; dmclic, chloride ION c	96.39
2gsq_A	202	Squid GST, glutathione S-transferase; squid digest	96.39
4ags_A	471	Thiol-dependent reductase 1; transferase, leishman	96.37
3m8n_A	225	Possible glutathione S-transferase; PSI-II, struct	96.33
2i4a_A	107	Thioredoxin; acidophIle, disulfide exchange, oxido	96.33
2vlu_A	122	Thioredoxin, thioredoxin H isoform 2.; oxidoreduct	96.32
3m0f_A	213	Uncharacterized protein GST_N; PSI-2, NYSGXRC, glu	96.25
3niv_A	222	Glutathione S-transferase; structural genomics, PS	96.23
1fb6_A	105	Thioredoxin M; electron transport; 2.10A {Spinacia	96.21
1t00_A	112	Thioredoxin, TRX; redox regulation, multifunction	96.21
1xfl_A	124	Thioredoxin H1; AT3G51030, structural genomics, pr	96.2
1vf1_A	229	Glutathione S-transferase 3; detoxification; HET:	96.2
1dby_A	107	Chloroplast thioredoxin M CH2; thioredoxin CH2, ch	96.2
3cxg_A	133	Putative thioredoxin; malaria, structural GEN oxid	96.19
2wz9_A	153	Glutaredoxin-3; protein binding; 1.55A {Homo sapie	96.19
4f03_A	253	Glutathione transferase; GST fold; 1.80A {Phaneroc	96.18
3ein_A	209	GST class-theta, glutathione S-transferase 1-1; de	96.17
3gnj_A	111	Thioredoxin domain protein; APC92103, STR genomics	96.17
1k3y_A	221	GSTA1-1, glutathione S-transferase A1; S-hexyl glu	96.17
2trx_A	108	Thioredoxin; electron transport; 1.68A {Escherichi	96.16
4hz2_A	230	Glutathione S-transferase domain; glutathione,enzy	96.15
3ubk_A	242	Glutathione transferase; GSH binding; 1.95A {Lepto	96.13
1v98_A	140	Thioredoxin; oxidoreductase, structural genomics,	96.12
3vk9_A	216	Glutathione S-transferase delta; glutathione bindi	96.12
1w4v_A	119	Thioredoxin, mitochondrial; antioxidant enzyme, mi	96.1
3d22_A	139	TRXH4, thioredoxin H-type; electron transport, cyt	96.1
3d6i_A	112	Monothiol glutaredoxin-3; thioredoxin-like, electr	96.09
2l57_A	126	Uncharacterized protein; structural genomics, unkn	96.07
3gyk_A	175	27KDA outer membrane protein; APC61738.2, siliciba	96.07
4euy_A	105	Uncharacterized protein; structural genomics, PSI-	96.06
2yv9_A	291	Chloride intracellular channel EXC-4; chloride ION	96.05
4dej_A	231	Glutathione S-transferase related protein; transfe	96.05
3qfa_C	116	Thioredoxin; protein-protein complex, rossmann fol	96.05
3f3q_A	109	Thioredoxin-1; His TAG, electron transport, cytopl	96.05
1nhy_A	219	EF-1-gamma 1, elongation factor 1-gamma 1; protein	96.03
3ik7_A	222	Glutathione S-transferase A4; human GST A4-4, enzy	96.03
2xc2_A	117	Thioredoxinn; oxidoreductase, protein disulfide re	96.02
3r2q_A	202	Uncharacterized GST-like protein YIBF; transferase	95.98
3gtu_B	224	Glutathione S-transferase; conjugation, detoxifica	95.97
2vim_A	104	Thioredoxin, TRX; thioredoxin fold, oxidoreductase	95.96
4ags_A	471	Thiol-dependent reductase 1; transferase, leishman	95.94
2wb9_A	211	Glutathione transferase sigma class; thioredoxin f	95.93
1nsw_A	105	Thioredoxin, TRX; thermostability, electron transp	95.93
1ti3_A	113	Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Popul	95.84
1tu7_A	208	Glutathione S-transferase 2; HET: GSH; 1.50A {Onch	95.84
3die_A	106	Thioredoxin, TRX; electron transport, SWAP domain,	95.83
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	95.79
3iv4_A	112	Putative oxidoreductase; APC23140, meticillin-resi	95.78
1gh2_A	107	Thioredoxin-like protein; redox-active center, ele	95.76
3tco_A	109	Thioredoxin (TRXA-1); disulfide oxidoreductase, ox	95.76
1xwb_A	106	Thioredoxin; dimerization, redox regulation, THI X	95.75
3hz4_A	140	Thioredoxin; NYSGXRC, PSI-II, reduced form, protei	95.73
4glt_A	225	Glutathione S-transferase-like protein; structural	95.71
4ikh_A	244	Glutathione S-transferase; enzyme function initiat	95.69
3p2a_A	148	Thioredoxin 2, putative thioredoxin-like protein;	95.69
1ilo_A	77	Conserved hypothetical protein MTH895; beta-alpha-	95.68
3aps_A	122	DNAJ homolog subfamily C member 10; thioredoxin fo	95.67
4exj_A	238	Uncharacterized protein; transferase-like protein,	95.66
1r26_A	125	Thioredoxin; redox-active disulfide, electron tran	95.65
1m0u_A	249	GST2 gene product; flight muscle protein, sigma, t	95.61
2i1u_A	121	Thioredoxin, TRX, MPT46; redox protein, electron t	95.59
1faa_A	124	Thioredoxin F; electron transport; 1.85A {Spinacia	95.54
3cbu_A	214	Probable GST-related protein; thioredoxin fold, GS	95.5
2x64_A	207	Glutathione-S-transferase; detoxification enzyme;	95.45
3tou_A	226	Glutathione S-transferase protein; GSH binding sit	95.45
1zzo_A	136	RV1677; thioredoxin fold, structural genomics, PSI	95.43
1b48_A	221	GST, mgsta4-4, protein (glutathione S-transferase)	95.42
2pu9_C	111	TRX-F, thioredoxin F-type, chloroplast; protein-pr	95.41
3gx0_A	215	GST-like protein YFCG; transferase, glutathione, g	95.34
2j23_A	121	Thioredoxin; immune protein, autoreactivity, cross	95.31
3uvt_A	111	Thioredoxin domain-containing protein 5; thioredox	95.29
2ycd_A	230	Glutathione S-transferase; SOIL bacteria, herbicid	95.24
1zma_A	118	Bacterocin transport accessory protein; alpha-beta	95.24
4hz4_A	217	Glutathione-S-transferase; enzyme function initiat	95.16
2voc_A	112	Thioredoxin; electron transport, homodimer, disulf	95.15
2f51_A	118	Thioredoxin; electron transport; 1.90A {Trichomona	95.13
3ul3_B	128	Thioredoxin, thioredoxin-2; PTEX, oxidoreductase;	95.12
2o8v_B	128	Thioredoxin 1; disulfide crosslinked complex, oxid	95.02
2ywm_A	229	Glutaredoxin-like protein; redox protein, structur	94.91
1mek_A	120	Protein disulfide isomerase; electron transport, r	94.88
2ppt_A	155	Thioredoxin-2; thiredoxin, zinc finger, oxidoreduc	94.84
1x5e_A	126	Thioredoxin domain containing protein 1; TMX, TXND	94.82
3c8e_A	288	YGHU, glutathione S-transferase homologue; glutath	94.81
2l5l_A	136	Thioredoxin; structural genomics, electron transpo	94.79
1gsu_A	219	GST, CGSTM1-1, class-MU glutathione S-transferase;	94.76
1t3b_A	211	Thiol:disulfide interchange protein DSBC; oxidored	94.75
2ju5_A	154	Thioredoxin disulfide isomerase; protein, oxidored	94.75
1eej_A	216	Thiol:disulfide interchange protein; oxidoreductas	94.71
2fhe_A	216	GST, glutathione S-transferase; transferase-substr	94.58
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	94.57
1oe8_A	211	Glutathione S-transferase; schistosomiasis, detoxi	94.45
3iso_A	218	Putative glutathione transferase; GST; HET: GSH; 1	94.44
4ecj_A	244	Glutathione S-transferase; transferase-like protei	94.43
3hxs_A	141	Thioredoxin, TRXP; electron transport; 2.00A {Bact	94.4
2c4j_A	218	Glutathione S-transferase MU 2; glutathione transf	94.38
2dj1_A	140	Protein disulfide-isomerase A4; protein ERP-72, ER	94.35
3uar_A	227	Glutathione S-transferase; GSH binding site; HET:	94.34
4gf0_A	215	Glutathione S-transferase; GST, enzyme function in	94.2
3zzx_A	105	Thioredoxin; oxidoreductase; 1.88A {Litopenaeus va	94.05
4id0_A	214	Glutathione S-transferase-like protein YIBF; GST,	93.94
1x5d_A	133	Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC	93.88
3lsz_A	225	Glutathione S-transferase; xenobiotic, biodegradat	93.77
3emx_A	135	Thioredoxin; structural genomics, oxidoreductase,	93.72
2f9s_A	151	Thiol-disulfide oxidoreductase RESA; thioredoxin-l	93.7
1lu4_A	136	Soluble secreted antigen MPT53; thioredoxin-like f	93.64
2yj7_A	106	LPBCA thioredoxin; oxidoreductase; 1.65A {Syntheti	92.69
1dug_A	234	Chimera of glutathione S-transferase-synthetic lin	93.57
1qgv_A	142	Spliceosomal protein U5-15KD; snRNP, thioredoxin,	93.52
2lrn_A	152	Thiol:disulfide interchange protein; structural ge	93.48
2av4_A	160	Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECI	93.45
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	93.43
1a8l_A	226	Protein disulfide oxidoreductase; PDI, thioredoxin	93.21
1wou_A	123	Thioredoxin -related protein, 14 kDa; electron tra	93.08
2dml_A	130	Protein disulfide-isomerase A6; thioredoxin domain	93.06
2fwh_A	134	Thiol:disulfide interchange protein DSBD; thioredo	93.02
2kuc_A	130	Putative disulphide-isomerase; structural genomics	92.93
3fk8_A	133	Disulphide isomerase; APC61824.1, xylella fastidio	92.83
1n2a_A	201	Glutathione S-transferase; HET: GTS; 1.90A {Escher	92.56
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	92.48
2rem_A	193	Disulfide oxidoreductase; disulfide oxidoreductase	92.45
3ha9_A	165	Uncharacterized thioredoxin-like protein; PSI, MCS	92.38
3h79_A	127	Thioredoxin-like protein; thioredoxin fold, cataly	92.31
2pvq_A	201	Glutathione S-transferase; xenobiotics detoxificat	92.06
3h1n_A	252	Probable glutathione S-transferase; APC84167, bord	91.91
1kng_A	156	Thiol:disulfide interchange protein CYCY; thioredo	91.85
1z6m_A	175	Conserved hypothetical protein; structural genomic	91.63
1pmt_A	203	PMGST, GST B1-1, glutathione transferase; glutathi	91.6
2dsa_A	203	Glutathione S-transferase; HET: GSH HPX; 2.10A {Bu	91.41
1f2e_A	201	Glutathione S-transferase; GST complexed with glut	91.26
2lst_A	130	Thioredoxin; structural genomics, NEW YORK structu	90.57
1a8l_A	226	Protein disulfide oxidoreductase; PDI, thioredoxin	91.14
2dj3_A	133	Protein disulfide-isomerase A4; protein ERP-72, ER	91.11
1wmj_A	130	Thioredoxin H-type; structural genomics, program f	91.1
3or5_A	165	Thiol:disulfide interchange protein, thioredoxin p	91.06
3gix_A	149	Thioredoxin-like protein 4B; PRE-mRNA splicing, TX	90.81
3fkf_A	148	Thiol-disulfide oxidoreductase; structural genomic	90.65
3hcz_A	148	Possible thiol-disulfide isomerase; APC61559.2, cy	90.45
1xg8_A	111	Hypothetical protein SA0798; structural genomics,	90.36
2dj0_A	137	Thioredoxin-related transmembrane protein 2; AVLA2	90.32
2b5x_A	148	YKUV protein, TRXY; thioredoxin-like, oxidoreducta	90.3
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	90.16
3hd5_A	195	Thiol:disulfide interchange protein DSBA; protein	90.12
2lja_A	152	Putative thiol-disulfide oxidoreductase; structura	90.0
1o73_A	144	Tryparedoxin; electron transport, trypanosomatid,	89.63
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	89.57
2l5o_A	153	Putative thioredoxin; structural genomics, unknown	89.56
3ppu_A	352	Glutathione-S-transferase; GST fold; HET: GSH; 2.3	89.39
3h93_A	192	Thiol:disulfide interchange protein DSBA; disulfid	89.22
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	89.07
3dxb_A	222	Thioredoxin N-terminally fused to PUF60(UHM); spli	89.03
3qou_A	287	Protein YBBN; thioredoxin-like fold, tetratricopep	88.86
3ewl_A	142	Uncharacterized conserved protein BF1870; alpha-be	88.77
1oaz_A	123	Thioredoxin 1; immune system, antibody/complex, an	88.46
2es7_A	142	Q8ZP25_salty, putative thiol-disulfide isomerase a	88.21
2trc_P	217	Phosducin, MEKA, PP33; transducin, beta-gamma, sig	88.17
1v58_A	241	Thiol:disulfide interchange protein DSBG; reduced	88.12
3eur_A	142	Uncharacterized protein; PSI2,MCSG, conserved prot	88.06
3lwa_A	183	Secreted thiol-disulfide isomerase; thioredoxin, P	87.97
2znm_A	195	Thiol:disulfide interchange protein DSBA; thioredo	87.73
3idv_A	241	Protein disulfide-isomerase A4; thioredoxin-like f	87.1
2djj_A	121	PDI, protein disulfide-isomerase; thioredoxin fold	87.06
3kgk_A	110	Arsenical resistance operon trans-acting represso;	86.83
3gl3_A	152	Putative thiol:disulfide interchange protein DSBE;	86.66
2lrt_A	152	Uncharacterized protein; structural genomics, thio	86.49
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	86.39
2dbc_A	135	PDCL2, unnamed protein product; phosducin-like pro	86.37
1i5g_A	144	Tryparedoxin II; electron transport; HET: TS5; 1.4	86.23
3evi_A	118	Phosducin-like protein 2; alpha beta, 3-layer(ABA)	85.71
3ktb_A	106	Arsenical resistance operon trans-acting represso;	85.67
3fw2_A	150	Thiol-disulfide oxidoreductase; structural genomic	85.55
1o8x_A	146	Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrot	85.46
3kcm_A	154	Thioredoxin family protein; SGX, thioredoxin prote	85.3
3ph9_A	151	Anterior gradient protein 3 homolog; thioredoxin f	85.23
3q6o_A	244	Sulfhydryl oxidase 1; protein disulfide isomerase,	85.17
1b8x_A	280	Protein (AML-1B); nuclear matrix targeting signal	85.17
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	84.77
1a0r_P	245	Phosducin, MEKA, PP33; transducin, beta-gamma, sig	84.67
3idv_A	241	Protein disulfide-isomerase A4; thioredoxin-like f	84.63
2qsi_A	137	Putative hydrogenase expression/formation protein;	84.55
2fno_A	248	AGR_PAT_752P; thioredoxin fold, GST C-terminal dom	83.79
3s9f_A	165	Tryparedoxin; thioredoxin fold, disulfide reductas	83.63
1bg5_A	254	MAB, fusion protein of alpha-Na,K-ATPase with glut	83.6
3gv1_A	147	Disulfide interchange protein; neisseria gonorrhoe	83.37
3f9u_A	172	Putative exported cytochrome C biogenesis-related;	83.11
3m1g_A	362	Putative glutathione S-transferase; ECM4-like subf	82.4
3ia1_A	154	THIO-disulfide isomerase/thioredoxin; oxidoreducta	81.41
4gci_A	211	Glutathione S-transferase; GST, enzyme function in	81.1
2qgv_A	140	Hydrogenase-1 operon protein HYAE; alpha-beta prot	80.89
1z6n_A	167	Hypothetical protein PA1234; alpha-beta-alpha sand	80.1
2dlx_A	153	UBX domain-containing protein 7; UAS domain, prote	80.08

>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}

Probab=99.89  E-value=7.6e-24  Score=173.45  Aligned_cols=102  Identities=24%  Similarity=0.297  Sum_probs=90.7

Q ss_pred             cccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCC-eEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEE
Q 048504          119 ESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRV-WVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKH  197 (277)
Q Consensus       119 ~~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV-~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~  197 (277)
                      .++|...+.+++||||++++. --+.|++|.+|+++|+.++| +|.++||..|++.+++|++++|.  +|+|||||||+|
T Consensus        10 ~e~i~~~i~~~~VvvF~Kgt~-~~P~C~fc~~ak~lL~~~gv~~~~~~~v~~~~~~r~~l~~~sg~--~TvPqIFI~g~~   86 (118)
T 2wul_A           10 AEQLDALVKKDKVVVFLKGTP-EQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPELRQGIKDYSNW--PTIPQVYLNGEF   86 (118)
T ss_dssp             HHHHHHHHHHSSEEEEESBCS-SSBSSHHHHHHHHHHHHTTCCSCEEEETTSCHHHHHHHHHHHTC--CSSCEEEETTEE
T ss_pred             HHHHHHHHhcCCEEEEEcCCC-CCCCCHHHHHHHHHHHHhCCcCeEeecccCCHHHHHHHHHhccC--CCCCeEeECCEE
Confidence            356777788999999999742 12358999999999999999 69999999999999999999976  899999999999


Q ss_pred             EechhHHHHHHhhccHHHHhcCCCCC
Q 048504          198 VGNADVLKSMYETGELARVLDGFPRR  223 (277)
Q Consensus       198 IGG~del~~L~EsGeL~klL~~~~~~  223 (277)
                      |||+|+|.+|+++|+|.++|+.++..
T Consensus        87 IGG~Ddl~~l~~~GeL~~lL~~~Gi~  112 (118)
T 2wul_A           87 VGGCDILLQMHQNGDLVEELKKLGIH  112 (118)
T ss_dssp             EECHHHHHHHHHHTHHHHHHHHTTCC
T ss_pred             ECCHHHHHHHHHCCCHHHHHHHcCCc
Confidence            99999999999999999999876643

>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A

Probab=99.89  E-value=2.3e-23  Score=171.57  Aligned_cols=91  Identities=19%  Similarity=0.198  Sum_probs=85.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHh--------CCCCCCCcEEEeCCEEEechh
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVF--------GGKNVTLPQVFIRGKHVGNAD  202 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~l--------G~~~~tvPqVFI~G~~IGG~d  202 (277)
                      |+||++++|+.++++.+|.+|++||+++||+|+|+||++|++.+++|++++        |.  .++|||||||+||||+|
T Consensus         2 V~vYtt~~c~~c~~kk~c~~aK~lL~~kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~--~tvPQIFi~~~~iGG~D   79 (121)
T 1u6t_A            2 IRVYIASSSGSTAIKKKQQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPATGY--PLPPQIFNESQYRGDYD   79 (121)
T ss_dssp             EEEEECTTCSCHHHHHHHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSS--CCSCEEEETTEEEEEHH
T ss_pred             EEEEecCCCCCccchHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHhccccccccCCC--cCCCEEEECCEEEechH
Confidence            899999999888888888999999999999999999999999999999998        54  79999999999999999


Q ss_pred             HHHHHHhhccHHHHhcCCCCC
Q 048504          203 VLKSMYETGELARVLDGFPRR  223 (277)
Q Consensus       203 el~~L~EsGeL~klL~~~~~~  223 (277)
                      ++.+|++.|+|.++|...+..
T Consensus        80 d~~~l~e~g~L~~lL~~~~~~  100 (121)
T 1u6t_A           80 AFFEARENNAVYAFLGLTAPP  100 (121)
T ss_dssp             HHHHHHHTTCHHHHHTCCCCT
T ss_pred             HHHHhhhhChHHHHHcCCCCC
Confidence            999999999999999876653

>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A

Probab=99.88  E-value=1.4e-22  Score=155.12  Aligned_cols=91  Identities=25%  Similarity=0.331  Sum_probs=79.2

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      .+|+||++++|+..++..+|.+|+++|+.+||+|+++||+.|++.+++|++++|....++|+|||||++|||+|++.+|+
T Consensus         2 ~~v~ly~~~~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi~g~~igG~d~l~~l~   81 (93)
T 1t1v_A            2 SGLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVNGNHYCGDYELFVEAV   81 (93)
T ss_dssp             CCEEEEECSSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEETTEEEEEHHHHHHHH
T ss_pred             CCEEEEEcCCCCCchhhHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEECCEEEeCHHHHHHHH
Confidence            57999999986422222333999999999999999999999999999999999832379999999999999999999999


Q ss_pred             hhccHHHHhcC
Q 048504          209 ETGELARVLDG  219 (277)
Q Consensus       209 EsGeL~klL~~  219 (277)
                      ++|+|+++|+.
T Consensus        82 ~~g~L~~~l~~   92 (93)
T 1t1v_A           82 EQDTLQEFLKL   92 (93)
T ss_dssp             HTTCHHHHTTC
T ss_pred             hcCCHHHHhCC
Confidence            99999999963

>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}

Probab=99.88  E-value=9.4e-23  Score=163.01  Aligned_cols=100  Identities=13%  Similarity=0.202  Sum_probs=89.0

Q ss_pred             ccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEe
Q 048504          120 SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVG  199 (277)
Q Consensus       120 ~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IG  199 (277)
                      ++|+..+..++||||+++.. -..+||+|.+|+++|+.+||+|+++||..|++.+++|++++|.  .++|+|||||++||
T Consensus         7 ~~v~~~i~~~~Vvlf~kg~~-~~~~Cp~C~~ak~~L~~~gi~y~~~di~~d~~~~~~l~~~~g~--~tvP~ifi~g~~iG   83 (111)
T 3zyw_A            7 LRLKKLTHAAPCMLFMKGTP-QEPRCGFSKQMVEILHKHNIQFSSFDIFSDEEVRQGLKAYSSW--PTYPQLYVSGELIG   83 (111)
T ss_dssp             HHHHHHHTSSSEEEEESBCS-SSBSSHHHHHHHHHHHHTTCCCEEEEGGGCHHHHHHHHHHHTC--CSSCEEEETTEEEE
T ss_pred             HHHHHHHhcCCEEEEEecCC-CCCcchhHHHHHHHHHHcCCCeEEEECcCCHHHHHHHHHHHCC--CCCCEEEECCEEEe
Confidence            56777788999999999221 1124699999999999999999999999999999999999986  89999999999999


Q ss_pred             chhHHHHHHhhccHHHHhcCCCC
Q 048504          200 NADVLKSMYETGELARVLDGFPR  222 (277)
Q Consensus       200 G~del~~L~EsGeL~klL~~~~~  222 (277)
                      |+|++.+|+++|+|.++|+.++.
T Consensus        84 G~d~l~~l~~~G~L~~~L~~a~~  106 (111)
T 3zyw_A           84 GLDIIKELEASEELDTICPKAAE  106 (111)
T ss_dssp             CHHHHHHHHHTTCHHHHSCCCCC
T ss_pred             cHHHHHHHHHCCCHHHHHHhCcc
Confidence            99999999999999999987664

>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A

Probab=99.87  E-value=2.2e-22  Score=159.54  Aligned_cols=98  Identities=17%  Similarity=0.312  Sum_probs=88.0

Q ss_pred             cccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEE
Q 048504          119 ESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHV  198 (277)
Q Consensus       119 ~~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~I  198 (277)
                      .+++...+..++|+||+++.- ..+.||+|.+|+++|+.+||+|+++||..|++.+++|++++|.  .++|+|||||++|
T Consensus         8 ~~~v~~~i~~~~Vvvy~k~t~-~~p~Cp~C~~ak~~L~~~gi~~~~~dI~~~~~~~~~l~~~~g~--~tvP~ifi~g~~i   84 (109)
T 3ipz_A            8 KDTLEKLVNSEKVVLFMKGTR-DFPMCGFSNTVVQILKNLNVPFEDVNILENEMLRQGLKEYSNW--PTFPQLYIGGEFF   84 (109)
T ss_dssp             HHHHHHHHTSSSEEEEESBCS-SSBSSHHHHHHHHHHHHTTCCCEEEEGGGCHHHHHHHHHHHTC--SSSCEEEETTEEE
T ss_pred             HHHHHHHHccCCEEEEEecCC-CCCCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHHCC--CCCCeEEECCEEE
Confidence            456777888999999999731 1234799999999999999999999999999999999999986  8999999999999


Q ss_pred             echhHHHHHHhhccHHHHhcC
Q 048504          199 GNADVLKSMYETGELARVLDG  219 (277)
Q Consensus       199 GG~del~~L~EsGeL~klL~~  219 (277)
                      ||+|++.+|+++|+|.++|+.
T Consensus        85 GG~d~l~~l~~~G~L~~~L~~  105 (109)
T 3ipz_A           85 GGCDITLEAFKTGELQEEVEK  105 (109)
T ss_dssp             ECHHHHHHHHHHSHHHHHHHH
T ss_pred             eCHHHHHHHHHcCcHHHHHHH
Confidence            999999999999999999975

>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}

Probab=99.86  E-value=2.6e-22  Score=162.89  Aligned_cols=102  Identities=19%  Similarity=0.205  Sum_probs=90.3

Q ss_pred             ccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCe---EEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCE
Q 048504          120 SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVW---VDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGK  196 (277)
Q Consensus       120 ~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~---y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~  196 (277)
                      ++|...+..++||||+++.- -...||+|.+|+++|+.+||+   |+++||..|++++++|++++|.  .++|||||||+
T Consensus         7 ~~v~~~i~~~~Vvvfsk~t~-~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~~~~~~~~~l~~~sg~--~tvP~vfI~g~   83 (121)
T 3gx8_A            7 KAIEDAIESAPVVLFMKGTP-EFPKCGFSRATIGLLGNQGVDPAKFAAYNVLEDPELREGIKEFSEW--PTIPQLYVNKE   83 (121)
T ss_dssp             HHHHHHHHSCSEEEEESBCS-SSBCTTHHHHHHHHHHHHTBCGGGEEEEECTTCHHHHHHHHHHHTC--CSSCEEEETTE
T ss_pred             HHHHHHhccCCEEEEEeccC-CCCCCccHHHHHHHHHHcCCCcceEEEEEecCCHHHHHHHHHHhCC--CCCCeEEECCE
Confidence            45666778999999999731 123468999999999999999   9999999999999999999986  89999999999


Q ss_pred             EEechhHHHHHHhhccHHHHhcCCCCCC
Q 048504          197 HVGNADVLKSMYETGELARVLDGFPRRQ  224 (277)
Q Consensus       197 ~IGG~del~~L~EsGeL~klL~~~~~~~  224 (277)
                      +|||+|++.+|+++|+|.++|+.++...
T Consensus        84 ~iGG~d~l~~l~~~G~L~~~L~~~g~~~  111 (121)
T 3gx8_A           84 FIGGCDVITSMARSGELADLLEEAQALV  111 (121)
T ss_dssp             EEESHHHHHHHHHHTHHHHHHHHTTCBC
T ss_pred             EEecHHHHHHHHHcCChHHHHHHcCCCC
Confidence            9999999999999999999998776543

>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.85  E-value=4.4e-21  Score=152.67  Aligned_cols=89  Identities=17%  Similarity=0.127  Sum_probs=80.2

Q ss_pred             CcEEEEEecCCCCCCCChhHH------HHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhC------CCCCCCcEEEeCCE
Q 048504          129 DRIVVYLTSLRGIRRTFEDCY------AVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG------GKNVTLPQVFIRGK  196 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~------~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG------~~~~tvPqVFI~G~  196 (277)
                      .+|+||++++|      ++|.      +|+++|+.++|+|+++||+.|++.+++|+++++      ..+.++|||||||+
T Consensus         8 m~V~vy~~~~C------~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~vfi~g~   81 (111)
T 2ct6_A            8 MVIRVFIASSS------GFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIFNGDR   81 (111)
T ss_dssp             CCEEEEECSSC------SCHHHHHHHHHHHHHHHHTTCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEEEETTE
T ss_pred             cEEEEEEcCCC------CCcccchhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEEEECCE
Confidence            36999999976      6888      899999999999999999999999999999962      12489999999999


Q ss_pred             EEechhHHHHHHhhccHHHHhcCCCCC
Q 048504          197 HVGNADVLKSMYETGELARVLDGFPRR  223 (277)
Q Consensus       197 ~IGG~del~~L~EsGeL~klL~~~~~~  223 (277)
                      +|||+|++.+|+++|+|+++|+..++.
T Consensus        82 ~iGG~d~l~~l~~~g~L~~~L~~~~~~  108 (111)
T 2ct6_A           82 YCGDYDSFFESKESNTVFSFLGLKSGP  108 (111)
T ss_dssp             EEEEHHHHHHHHTTTCHHHHHTCCSSS
T ss_pred             EEeCHHHHHHHHHcCCHHHHHcCCCCC
Confidence            999999999999999999999887654

>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1

Probab=99.84  E-value=6.5e-21  Score=150.07  Aligned_cols=100  Identities=20%  Similarity=0.335  Sum_probs=88.5

Q ss_pred             ccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEe
Q 048504          120 SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVG  199 (277)
Q Consensus       120 ~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IG  199 (277)
                      +.++..+..++|+||+++.. .+.+|++|.+|+.+|+.++|+|+++||+.|++++++|++++|.  .++|+|||||++||
T Consensus         6 ~~~~~~i~~~~vvvy~~g~~-~~~~Cp~C~~ak~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g~--~~vP~ifi~g~~ig   82 (109)
T 1wik_A            6 SGLKVLTNKASVMLFMKGNK-QEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKTFSNW--PTYPQLYVRGDLVG   82 (109)
T ss_dssp             CCHHHHHTTSSEEEEESSTT-TCCCSSTHHHHHHHHHHTCSCEEEEESSSCHHHHHHHHHHHSC--CSSCEEECSSSEEE
T ss_pred             HHHHHHhccCCEEEEEecCC-CCCCCchHHHHHHHHHHcCCCeEEEECCCCHHHHHHHHHHhCC--CCCCEEEECCEEEc
Confidence            45566667889999999433 2346789999999999999999999999999999999999986  89999999999999


Q ss_pred             chhHHHHHHhhccHHHHhcCCCC
Q 048504          200 NADVLKSMYETGELARVLDGFPR  222 (277)
Q Consensus       200 G~del~~L~EsGeL~klL~~~~~  222 (277)
                      |++++.+|+++|+|.++|+.+.+
T Consensus        83 G~d~l~~l~~~g~L~~~L~~a~~  105 (109)
T 1wik_A           83 GLDIVKELKDNGELLPILKGESG  105 (109)
T ss_dssp             CHHHHHHHHHHTCSHHHHHTCCS
T ss_pred             CHHHHHHHHHCCCHHHHHhcccC
Confidence            99999999999999999987554

>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A

Probab=99.84  E-value=1.9e-21  Score=161.55  Aligned_cols=99  Identities=19%  Similarity=0.262  Sum_probs=89.5

Q ss_pred             cccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEE
Q 048504          119 ESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHV  198 (277)
Q Consensus       119 ~~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~I  198 (277)
                      .+.+...+..++|+||++++.. +.+|++|.+|+++|+.++|+|+++||..|++.+++|++++|.  .++|+|||||++|
T Consensus        25 ~~~v~~~i~~~~Vvvy~ks~~~-~~~Cp~C~~ak~~L~~~gv~y~~vdI~~d~~~~~~L~~~~G~--~tvP~VfI~G~~i  101 (135)
T 2wci_A           25 IEKIQRQIAENPILLYMKGSPK-LPSCGFSAQAVQALAACGERFAYVDILQNPDIRAELPKYANW--PTFPQLWVDGELV  101 (135)
T ss_dssp             HHHHHHHHHHCSEEEEESBCSS-SBSSHHHHHHHHHHHTTCSCCEEEEGGGCHHHHHHHHHHHTC--CSSCEEEETTEEE
T ss_pred             HHHHHHHhccCCEEEEEEecCC-CCCCccHHHHHHHHHHcCCceEEEECCCCHHHHHHHHHHHCC--CCcCEEEECCEEE
Confidence            3567777778899999996543 457899999999999999999999999999999999999986  8999999999999


Q ss_pred             echhHHHHHHhhccHHHHhcCC
Q 048504          199 GNADVLKSMYETGELARVLDGF  220 (277)
Q Consensus       199 GG~del~~L~EsGeL~klL~~~  220 (277)
                      ||+|++.+|+++|+|+++|+.+
T Consensus       102 GG~d~l~~l~~~G~L~~~L~~~  123 (135)
T 2wci_A          102 GGCDIVIEMYQRGELQQLIKET  123 (135)
T ss_dssp             ESHHHHHHHHHHTHHHHHHHHH
T ss_pred             EChHHHHHHHHCChHHHHHHHc
Confidence            9999999999999999999754

>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0

Probab=99.82  E-value=5.4e-20  Score=143.84  Aligned_cols=84  Identities=23%  Similarity=0.362  Sum_probs=79.0

Q ss_pred             CCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHh-CCCCCCCcEEEeCCEEEechhHHH
Q 048504          127 TEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVF-GGKNVTLPQVFIRGKHVGNADVLK  205 (277)
Q Consensus       127 ~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~l-G~~~~tvPqVFI~G~~IGG~del~  205 (277)
                      ..++|+||++++|      |+|.+|+.+|+.++|+|+++||+.+++.+++|++++ |.  .++|+|||||++|||++++.
T Consensus        14 ~~~~v~vy~~~~C------p~C~~ak~~L~~~~i~y~~idI~~~~~~~~~l~~~~~g~--~~vP~ifi~g~~igG~d~l~   85 (99)
T 3qmx_A           14 VSAKIEIYTWSTC------PFCMRALALLKRKGVEFQEYCIDGDNEAREAMAARANGK--RSLPQIFIDDQHIGGCDDIY   85 (99)
T ss_dssp             CCCCEEEEECTTC------HHHHHHHHHHHHHTCCCEEEECTTCHHHHHHHHHHTTTC--CCSCEEEETTEEEESHHHHH
T ss_pred             CCCCEEEEEcCCC------hhHHHHHHHHHHCCCCCEEEEcCCCHHHHHHHHHHhCCC--CCCCEEEECCEEEeChHHHH
Confidence            3568999999975      899999999999999999999999999999999998 65  89999999999999999999


Q ss_pred             HHHhhccHHHHhc
Q 048504          206 SMYETGELARVLD  218 (277)
Q Consensus       206 ~L~EsGeL~klL~  218 (277)
                      +++++|+|.++|+
T Consensus        86 ~~~~~g~L~~~L~   98 (99)
T 3qmx_A           86 ALDGAGKLDPLLH   98 (99)
T ss_dssp             HHHHTTCHHHHHT
T ss_pred             HHHHcCCHHHHhc
Confidence            9999999999996

>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}

Probab=99.82  E-value=1.1e-20  Score=155.31  Aligned_cols=93  Identities=14%  Similarity=0.188  Sum_probs=82.2

Q ss_pred             ccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhC---CCeEEEEECCCC---HHHHHHHHHHhCCCCCCCcEEEeCC
Q 048504          122 IRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGF---RVWVDERDVSMD---SAYKKELQCVFGGKNVTLPQVFIRG  195 (277)
Q Consensus       122 i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~---gV~y~ErDVs~d---~~~reELke~lG~~~~tvPqVFI~G  195 (277)
                      +...+.+++|+||++++      ||+|.+|+++|+..   +++|.++||+.+   ++++++|++.+|.  .++|||||||
T Consensus         7 ~~~ii~~~~Vvvysk~~------Cp~C~~ak~lL~~~~~~~v~~~~idid~~~d~~~~~~~l~~~~G~--~tVP~IfI~G   78 (127)
T 3l4n_A            7 YSLILDLSPIIIFSKST------CSYSKGMKELLENEYQFIPNYYIIELDKHGHGEELQEYIKLVTGR--GTVPNLLVNG   78 (127)
T ss_dssp             HHHHHTSCSEEEEECTT------CHHHHHHHHHHHHHEEEESCCEEEEGGGSTTHHHHHHHHHHHHSC--CSSCEEEETT
T ss_pred             HHHHHccCCEEEEEcCC------CccHHHHHHHHHHhcccCCCcEEEEecCCCCHHHHHHHHHHHcCC--CCcceEEECC
Confidence            44456788999999986      58999999999985   799999999876   4678888888886  8999999999


Q ss_pred             EEEechhHHHHHHhhccHHHHhcCCCC
Q 048504          196 KHVGNADVLKSMYETGELARVLDGFPR  222 (277)
Q Consensus       196 ~~IGG~del~~L~EsGeL~klL~~~~~  222 (277)
                      ++|||+|++.+|+++|+|+++|+.++.
T Consensus        79 ~~IGG~ddl~~l~~~G~L~~lL~~~g~  105 (127)
T 3l4n_A           79 VSRGGNEEIKKLHTQGKLLESLQVWSD  105 (127)
T ss_dssp             EECCCHHHHHHHHHTTCHHHHHHHTCT
T ss_pred             EEEcCHHHHHHHHHCCCHHHHHHHhcC
Confidence            999999999999999999999987664

>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0

Probab=99.81  E-value=2.6e-20  Score=147.94  Aligned_cols=92  Identities=20%  Similarity=0.310  Sum_probs=81.6

Q ss_pred             ccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC---HHHHHHHHHHhCCCCCCCcEEEeCCE
Q 048504          120 SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD---SAYKKELQCVFGGKNVTLPQVFIRGK  196 (277)
Q Consensus       120 ~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d---~~~reELke~lG~~~~tvPqVFI~G~  196 (277)
                      +.+...+..++|+||++++      ||+|.+|+.+|+.+||+|+++||+.+   ++++++|++.+|.  .++|+|||||+
T Consensus         8 ~~~~~~i~~~~v~vy~~~~------Cp~C~~ak~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~~~g~--~tvP~vfi~g~   79 (114)
T 3h8q_A            8 RHLVGLIERSRVVIFSKSY------CPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQ--KTVPNIFVNKV   79 (114)
T ss_dssp             HHHHHHHHHCSEEEEECTT------CHHHHHHHHHHHHTTCCCEEEETTTSTTHHHHHHHHHHHHSC--CSSCEEEETTE
T ss_pred             HHHHHHhccCCEEEEEcCC------CCcHHHHHHHHHHcCCCcEEEEecCCCChHHHHHHHHHHhCC--CccCEEEECCE
Confidence            3455556688999999986      58999999999999999999999963   4567888888886  89999999999


Q ss_pred             EEechhHHHHHHhhccHHHHhcC
Q 048504          197 HVGNADVLKSMYETGELARVLDG  219 (277)
Q Consensus       197 ~IGG~del~~L~EsGeL~klL~~  219 (277)
                      +|||++++.+|+++|+|.++|+.
T Consensus        80 ~igG~d~l~~l~~~G~L~~~l~~  102 (114)
T 3h8q_A           80 HVGGCDQTFQAYQSGLLQKLLQE  102 (114)
T ss_dssp             EEESHHHHHHHHHHTHHHHHHHS
T ss_pred             EEeCHHHHHHHHHCCCHHHHhcC
Confidence            99999999999999999999984

>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}

Probab=99.81  E-value=3.6e-20  Score=144.40  Aligned_cols=96  Identities=20%  Similarity=0.350  Sum_probs=84.5

Q ss_pred             cccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEec
Q 048504          121 SIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGN  200 (277)
Q Consensus       121 ~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG  200 (277)
                      .+...+..++|+||+++.. .+..|++|++++.+|+.++|+|.++||+.|++.+++|.+++|.  .++|+|||||++|||
T Consensus         9 ~~~~~i~~~~vvvf~~g~~-~~~~C~~C~~~~~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g~--~~vP~v~i~g~~igg   85 (105)
T 2yan_A            9 RLKVLTNKASVMLFMKGNK-QEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKAYSNW--PTYPQLYVKGELVGG   85 (105)
T ss_dssp             HHHHHHTSSSEEEEESBCS-SSBCTTHHHHHHHHHHHHTCCCEEEEGGGCHHHHHHHHHHHTC--CSSCEEEETTEEEEC
T ss_pred             HHHHHhccCCEEEEEecCC-CCCCCccHHHHHHHHHHCCCCeEEEECCCCHHHHHHHHHHHCC--CCCCeEEECCEEEeC
Confidence            4455556778999999432 1345789999999999999999999999999999999999986  899999999999999


Q ss_pred             hhHHHHHHhhccHHHHhcC
Q 048504          201 ADVLKSMYETGELARVLDG  219 (277)
Q Consensus       201 ~del~~L~EsGeL~klL~~  219 (277)
                      ++++.+|+++|+|+++|+.
T Consensus        86 ~d~~~~l~~~g~L~~~l~~  104 (105)
T 2yan_A           86 LDIVKELKENGELLPILRG  104 (105)
T ss_dssp             HHHHHHHHHTTCHHHHHTT
T ss_pred             hHHHHHHHHCCCHHHHhcc
Confidence            9999999999999999964

>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*

Probab=99.80  E-value=5.5e-20  Score=144.26  Aligned_cols=95  Identities=26%  Similarity=0.392  Sum_probs=82.3

Q ss_pred             ccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC----HHHHHHHHHHhCCCCCCCcEEEeCC
Q 048504          120 SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD----SAYKKELQCVFGGKNVTLPQVFIRG  195 (277)
Q Consensus       120 ~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d----~~~reELke~lG~~~~tvPqVFI~G  195 (277)
                      +.++..+..++|+||++++|      |+|++++.+|+.++|+|.++||+.+    ++.+++|.+.+|.  .++|+|||||
T Consensus        10 ~~~~~~i~~~~v~vy~~~~C------p~C~~~~~~L~~~~i~~~~~di~~~~~~~~~~~~~l~~~~g~--~tvP~ifi~g   81 (113)
T 3rhb_A           10 ESIRKTVTENTVVIYSKTWC------SYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQ--HTVPNVFVCG   81 (113)
T ss_dssp             HHHHHHHHHSSEEEEECTTC------HHHHHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHHHHHHHSC--CSSCEEEETT
T ss_pred             HHHHHHHhcCCEEEEECCCC------hhHHHHHHHHHHcCCCCeEEEeecCCCChHHHHHHHHHHhCC--CCcCEEEECC
Confidence            34555566788999999875      8999999999999999999999874    6778888888886  8999999999


Q ss_pred             EEEechhHHHHHHhhccHHHHhcCCCC
Q 048504          196 KHVGNADVLKSMYETGELARVLDGFPR  222 (277)
Q Consensus       196 ~~IGG~del~~L~EsGeL~klL~~~~~  222 (277)
                      ++|||++++.+|+++|+|.++|+.++.
T Consensus        82 ~~igG~~~~~~~~~~g~L~~~l~~~~~  108 (113)
T 3rhb_A           82 KHIGGCTDTVKLNRKGDLELMLAEANG  108 (113)
T ss_dssp             EEEESHHHHHHHHHHTHHHHHHTC---
T ss_pred             EEEcCcHHHHHHHHcCCHHHHHHHHhh
Confidence            999999999999999999999987654

>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*

Probab=99.78  E-value=1.5e-19  Score=147.72  Aligned_cols=95  Identities=21%  Similarity=0.341  Sum_probs=84.6

Q ss_pred             ccccccCCCCCCcEEEEEecCCCCCCCChhHHHH-HHHHHhCC---CeEEEEECCCC---HHHHHHHHHHhCCCCCCCcE
Q 048504          118 NESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAV-RMIFRGFR---VWVDERDVSMD---SAYKKELQCVFGGKNVTLPQ  190 (277)
Q Consensus       118 ~~~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~V-k~iL~~~g---V~y~ErDVs~d---~~~reELke~lG~~~~tvPq  190 (277)
                      ..+.+...+.+++|+||++++      ||+|.+| +.+|+.++   ++|+++||+.+   ++++++|++++|.  .++|+
T Consensus        26 ~~~~v~~~i~~~~Vvvy~~~~------Cp~C~~a~k~~L~~~~~~~i~~~~vdvd~~~~~~~~~~~L~~~~g~--~tVP~   97 (129)
T 3ctg_A           26 TVAHVKDLIGQKEVFVAAKTY------CPYCKATLSTLFQELNVPKSKALVLELDEMSNGSEIQDALEEISGQ--KTVPN   97 (129)
T ss_dssp             HHHHHHHHHHHSSEEEEECTT------CHHHHHHHHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSC--CSSCE
T ss_pred             HHHHHHHHHcCCCEEEEECCC------CCchHHHHHHHHHhcCccCCCcEEEEccccCCHHHHHHHHHHHhCC--CCCCE
Confidence            345666667778999999986      5899999 99999999   99999999877   4578899999986  89999


Q ss_pred             EEeCCEEEechhHHHHHHhhccHHHHhcCC
Q 048504          191 VFIRGKHVGNADVLKSMYETGELARVLDGF  220 (277)
Q Consensus       191 VFI~G~~IGG~del~~L~EsGeL~klL~~~  220 (277)
                      |||||++|||+|++.+|+++|+|+++|+.+
T Consensus        98 vfi~g~~igG~d~l~~l~~~G~L~~~L~~a  127 (129)
T 3ctg_A           98 VYINGKHIGGNSDLETLKKNGKLAEILKPV  127 (129)
T ss_dssp             EEETTEEEESHHHHHHHHHTTHHHHHTTTT
T ss_pred             EEECCEEEcCHHHHHHHHHCCCHHHHHHHH
Confidence            999999999999999999999999999753

>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*

Probab=99.73  E-value=1.4e-18  Score=139.17  Aligned_cols=93  Identities=26%  Similarity=0.380  Sum_probs=82.1

Q ss_pred             ccccCCCCCCcEEEEEecCCCCCCCChhHHHH-HHHHHhCC---CeEEEEECCCCH---HHHHHHHHHhCCCCCCCcEEE
Q 048504          120 SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAV-RMIFRGFR---VWVDERDVSMDS---AYKKELQCVFGGKNVTLPQVF  192 (277)
Q Consensus       120 ~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~V-k~iL~~~g---V~y~ErDVs~d~---~~reELke~lG~~~~tvPqVF  192 (277)
                      +.+...+.+++|+||++++|      ++|.++ +.+|+.++   |+|.++||+.++   +.+++|.+++|.  .++|+||
T Consensus        16 ~~~~~~i~~~~Vvvf~~~~C------p~C~~alk~~L~~~~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~--~tvP~vf   87 (118)
T 3c1r_A           16 KHVKDLIAENEIFVASKTYC------PYCHAALNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQ--RTVPNIY   87 (118)
T ss_dssp             HHHHHHHHHSSEEEEECSSC------HHHHHHHHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSC--CSSCEEE
T ss_pred             HHHHHHHccCcEEEEEcCCC------cCHHHHHHHHHHHcCCCCCCeEEEECccCCChHHHHHHHHHHhCC--CCcCEEE
Confidence            34444555678999999875      899999 99999999   999999999874   578899999986  8999999


Q ss_pred             eCCEEEechhHHHHHHhhccHHHHhcCC
Q 048504          193 IRGKHVGNADVLKSMYETGELARVLDGF  220 (277)
Q Consensus       193 I~G~~IGG~del~~L~EsGeL~klL~~~  220 (277)
                      |||++|||++++.+|+++|+|+++|+.+
T Consensus        88 i~g~~igG~d~l~~l~~~g~L~~~L~~~  115 (118)
T 3c1r_A           88 INGKHIGGNDDLQELRETGELEELLEPI  115 (118)
T ss_dssp             ETTEEEESHHHHHHHHHHTHHHHHHHHH
T ss_pred             ECCEEEEcHHHHHHHHHCCcHHHHHHHc
Confidence            9999999999999999999999999753

>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A

Probab=99.72  E-value=2.2e-17  Score=124.34  Aligned_cols=75  Identities=23%  Similarity=0.314  Sum_probs=66.8

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECC-----CCHHHHHHHHHHhCCCCC-----CCcEEEe-CCEEE
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVS-----MDSAYKKELQCVFGGKNV-----TLPQVFI-RGKHV  198 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs-----~d~~~reELke~lG~~~~-----tvPqVFI-~G~~I  198 (277)
                      +|+||+++...  .+|++|.+|+++|+.++|+|+++||+     .+++.+++|++++|.  .     ++|+||| ||++|
T Consensus         1 ~v~iY~~~~~~--~~Cp~C~~ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~--~~~~~~tvP~v~i~~g~~i   76 (87)
T 1aba_A            1 MFKVYGYDSNI--HKCGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGR--DTQIGLTMPQVFAPDGSHI   76 (87)
T ss_dssp             CEEEEECCTTT--SCCHHHHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTC--SCCTTCCSCEEECTTSCEE
T ss_pred             CEEEEEeCCCC--CcCccHHHHHHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCC--CCCCCCccCEEEEECCEEE
Confidence            48999998111  13589999999999999999999999     889999999999986  5     9999999 99999


Q ss_pred             echhHHHHHH
Q 048504          199 GNADVLKSMY  208 (277)
Q Consensus       199 GG~del~~L~  208 (277)
                      ||++++.+|+
T Consensus        77 gG~d~l~~~~   86 (87)
T 1aba_A           77 GGFDQLREYF   86 (87)
T ss_dssp             ESHHHHHHHT
T ss_pred             eCHHHHHHhc
Confidence            9999999886

>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}

Probab=99.72  E-value=6.1e-17  Score=121.56  Aligned_cols=86  Identities=27%  Similarity=0.419  Sum_probs=79.8

Q ss_pred             CCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHH
Q 048504          125 PGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVL  204 (277)
Q Consensus       125 ~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del  204 (277)
                      |..+.+|++|++++|      ++|++++.+|+.++|+|+++||+.++..+++|.+.+|.  .++|++|+||++|||++++
T Consensus         2 p~~m~~v~ly~~~~C------~~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~~--~~vP~l~~~g~~i~g~~~i   73 (92)
T 2khp_A            2 PGSMVDVIIYTRPGC------PYCARAKALLARKGAEFNEIDASATPELRAEMQERSGR--NTFPQIFIGSVHVGGCDDL   73 (92)
T ss_dssp             CCCCCCEEEEECTTC------HHHHHHHHHHHHTTCCCEEEESTTSHHHHHHHHHHHTS--SCCCEEEETTEEEESHHHH
T ss_pred             CCCcccEEEEECCCC------hhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHhCC--CCcCEEEECCEEEcCHHHH
Confidence            445678999999864      89999999999999999999999999999999999976  7999999999999999999


Q ss_pred             HHHHhhccHHHHhc
Q 048504          205 KSMYETGELARVLD  218 (277)
Q Consensus       205 ~~L~EsGeL~klL~  218 (277)
                      .+++++|+|+++|+
T Consensus        74 ~~~~~~~~l~~~l~   87 (92)
T 2khp_A           74 YALEDEGKLDSLLK   87 (92)
T ss_dssp             HHHHTTTCHHHHHH
T ss_pred             HHHHHcCCHHHHHh
Confidence            99999999999997

>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*

Probab=99.71  E-value=2.3e-17  Score=126.40  Aligned_cols=92  Identities=22%  Similarity=0.331  Sum_probs=82.0

Q ss_pred             ccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCe---EEEEECCCC---HHHHHHHHHHhCCCCCCCcEEEeCC
Q 048504          122 IRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVW---VDERDVSMD---SAYKKELQCVFGGKNVTLPQVFIRG  195 (277)
Q Consensus       122 i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~---y~ErDVs~d---~~~reELke~lG~~~~tvPqVFI~G  195 (277)
                      +...+..++|++|++++|      ++|++++.+|+.++++   |.++||+.+   ++.+++|.+.+|.  .++|+|||+|
T Consensus         5 ~~~~i~~~~v~~f~~~~C------~~C~~~~~~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~--~~vP~i~~~g   76 (105)
T 1kte_A            5 VNSKIQPGKVVVFIKPTC------PFCRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGA--RTVPRVFIGK   76 (105)
T ss_dssp             HHHHCCTTCEEEEECSSC------HHHHHHHHHHHHSCBCTTSEEEEEGGGSTTHHHHHHHHHHHHSC--CCSCEEEETT
T ss_pred             HHhhcccCCEEEEEcCCC------HhHHHHHHHHHHcCCCCCccEEEEccCCCCHHHHHHHHHHHhCC--CCcCeEEECC
Confidence            444556778999999875      8999999999999999   999999987   5778899999976  7999999999


Q ss_pred             EEEechhHHHHHHhhccHHHHhcCCC
Q 048504          196 KHVGNADVLKSMYETGELARVLDGFP  221 (277)
Q Consensus       196 ~~IGG~del~~L~EsGeL~klL~~~~  221 (277)
                      ++|||++++.++++.|+|+++|+.++
T Consensus        77 ~~i~g~~~~~~~~~~g~L~~~l~~~g  102 (105)
T 1kte_A           77 ECIGGCTDLESMHKRGELLTRLQQVG  102 (105)
T ss_dssp             EEEESHHHHHHHHHHTHHHHHHHHHT
T ss_pred             EEEeccHHHHHHHHCCcHHHHHHHcC
Confidence            99999999999999999999997643

>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*

Probab=99.71  E-value=5e-17  Score=118.54  Aligned_cols=81  Identities=23%  Similarity=0.385  Sum_probs=75.8

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHHh
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYE  209 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~E  209 (277)
                      +|++|++++      |++|++++.+|+.++|+|+++||+.+++.++++.+..|.  .++|+||+||++|||++++.++++
T Consensus         2 ~i~~y~~~~------C~~C~~~~~~l~~~~i~~~~~~i~~~~~~~~~~~~~~~~--~~vP~l~~~g~~i~g~~~i~~~~~   73 (82)
T 1fov_A            2 NVEIYTKET------CPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGR--TTVPQIFIDAQHIGGYDDLYALDA   73 (82)
T ss_dssp             CEEEEECSS------CHHHHHHHHHHHHHTCCCEEEECTTCSHHHHHHHHHHSS--CCSCEEEETTEEEESHHHHHHHHH
T ss_pred             cEEEEECCC------ChhHHHHHHHHHHCCCCcEEEECCCCHHHHHHHHHHhCC--CCcCEEEECCEEEeCHHHHHHHHH
Confidence            689999986      589999999999999999999999988888999999876  799999999999999999999999


Q ss_pred             hccHHHHhc
Q 048504          210 TGELARVLD  218 (277)
Q Consensus       210 sGeL~klL~  218 (277)
                      +|+|+++|+
T Consensus        74 ~g~l~~~l~   82 (82)
T 1fov_A           74 RGGLDPLLK   82 (82)
T ss_dssp             TTCSHHHHC
T ss_pred             CCCHHHHhC
Confidence            999999984

>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B

Probab=99.70  E-value=6.4e-17  Score=127.64  Aligned_cols=96  Identities=15%  Similarity=0.255  Sum_probs=86.7

Q ss_pred             cccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCe---EEEEECCCCH---HHHHHHHHHhCCCCCCCcEEE
Q 048504          119 ESSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVW---VDERDVSMDS---AYKKELQCVFGGKNVTLPQVF  192 (277)
Q Consensus       119 ~~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~---y~ErDVs~d~---~~reELke~lG~~~~tvPqVF  192 (277)
                      .+.+...+...+|++|++++|      ++|++++.+|+.++++   |.++||+.++   +.+++|.+.+|.  .++|+||
T Consensus         9 ~~~~~~~i~~~~vv~f~~~~C------p~C~~~~~~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~--~~vP~v~   80 (114)
T 2hze_A            9 EEFVQQRLANNKVTIFVKYTC------PFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGG--KTVPRIF   80 (114)
T ss_dssp             HHHHHTTCCTTCEEEEECTTC------HHHHHHHHHHTTSCBCTTSEEEEEGGGSSSHHHHHHHHHHHHSC--CSSCEEE
T ss_pred             HHHHHHHhccCCEEEEEeCCC------hhHHHHHHHHHHcCCCcCceEEEEccCCCChHHHHHHHHHHhCC--CCcCEEE
Confidence            356777788899999999875      8999999999999999   9999999885   778899999986  7999999


Q ss_pred             eCCEEEechhHHHHHHhhccHHHHhcCCCC
Q 048504          193 IRGKHVGNADVLKSMYETGELARVLDGFPR  222 (277)
Q Consensus       193 I~G~~IGG~del~~L~EsGeL~klL~~~~~  222 (277)
                      |||++|||++++..+++.|+|.++|+..+.
T Consensus        81 i~g~~igg~~~~~~~~~~~~L~~~L~~~g~  110 (114)
T 2hze_A           81 FGKTSIGGYSDLLEIDNMDALGDILSSIGV  110 (114)
T ss_dssp             ETTEEEESHHHHHHHHHTTCHHHHHHHTTC
T ss_pred             ECCEEEeCcHHHHHHHHCChHHHHHHHcCC
Confidence            999999999999999999999999986543

>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}

Probab=99.69  E-value=7.3e-17  Score=120.96  Aligned_cols=85  Identities=28%  Similarity=0.443  Sum_probs=77.5

Q ss_pred             CCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHh-CCCCCCCcEEEeCCEEEechhH
Q 048504          125 PGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVF-GGKNVTLPQVFIRGKHVGNADV  203 (277)
Q Consensus       125 ~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~l-G~~~~tvPqVFI~G~~IGG~de  203 (277)
                      |..+.+|++|++++|      ++|++++.+|+.++++|+++||+  ++.+++|.+++ |.  .++|+||+||++|||+++
T Consensus         2 ~~mm~~v~~y~~~~C------~~C~~~~~~L~~~~i~~~~vdv~--~~~~~~l~~~~~~~--~~vP~l~~~g~~i~g~~~   71 (89)
T 2klx_A            2 PGSMKEIILYTRPNC------PYCKRARDLLDKKGVKYTDIDAS--TSLRQEMVQRANGR--NTFPQIFIGDYHVGGCDD   71 (89)
T ss_dssp             CCCCCCEEEESCSCC------TTTHHHHHHHHHHTCCEEEECSC--HHHHHHHHHHHHSS--CCSCEEEETTEECCSHHH
T ss_pred             CCCcceEEEEECCCC------hhHHHHHHHHHHcCCCcEEEECC--HHHHHHHHHHhCCC--CCcCEEEECCEEEeChHH
Confidence            455678999999875      79999999999999999999998  67788899888 76  799999999999999999


Q ss_pred             HHHHHhhccHHHHhcC
Q 048504          204 LKSMYETGELARVLDG  219 (277)
Q Consensus       204 l~~L~EsGeL~klL~~  219 (277)
                      +.+++++|+|+++|+.
T Consensus        72 i~~~~~~g~l~~~l~~   87 (89)
T 2klx_A           72 LYALENKGKLDSLLQD   87 (89)
T ss_dssp             HHHHHHHTTHHHHHHH
T ss_pred             HHHHHHcCcHHHHHhh
Confidence            9999999999999974

>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}

Probab=99.67  E-value=1.9e-17  Score=157.92  Aligned_cols=95  Identities=25%  Similarity=0.334  Sum_probs=83.3

Q ss_pred             ccccCCCCCCcEEEEEecCCCCCCCChhHHHHHH-HHHhCCCeEEEEEC------CCCHHHHHHHHHHhCCCCCCCcEEE
Q 048504          120 SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRM-IFRGFRVWVDERDV------SMDSAYKKELQCVFGGKNVTLPQVF  192 (277)
Q Consensus       120 ~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~-iL~~~gV~y~ErDV------s~d~~~reELke~lG~~~~tvPqVF  192 (277)
                      +.|...+..++|+||++++      ||+|.+|++ +|+.++|+|.++||      ..+++++++|++++|.  .++||||
T Consensus       252 ~~V~~lI~~~~VvVYsk~~------CPyC~~Ak~~LL~~~gV~y~eidVlEld~~~~~~e~~~~L~~~tG~--~TVPqVF  323 (362)
T 2jad_A          252 KHVKDLIAENEIFVASKTY------CPYSHAALNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQ--RTVPNIY  323 (362)
T ss_dssp             HHHHHHHHTCSEEEEECTT------CHHHHHHHHHHHTTTCCCTTTEEEEEGGGSTTHHHHHHHHHHHHCC--CSSCEEE
T ss_pred             HHHHHHhccCCEEEEEcCC------CcchHHHHHHHHHHcCCCcceEEEEEeccccCCHHHHHHHHHHHCC--CCcCEEE
Confidence            4677777899999999986      589999997 89999999876665      4567899999999986  8999999


Q ss_pred             eCCEEEechhHHHHHHhhccHHHHhcCCCC
Q 048504          193 IRGKHVGNADVLKSMYETGELARVLDGFPR  222 (277)
Q Consensus       193 I~G~~IGG~del~~L~EsGeL~klL~~~~~  222 (277)
                      |||++|||+|+|.+|+++|+|+++|+.++.
T Consensus       324 I~Gk~IGG~DdL~~L~~~GeL~~lL~~~~~  353 (362)
T 2jad_A          324 INGKHIGGNDDLQELRETGELEELLEPILA  353 (362)
T ss_dssp             ETTEEEESHHHHHHHHHSSHHHHHHHHHC-
T ss_pred             ECCEEEEChHHHHHhhhCChHHHHHHhCch
Confidence            999999999999999999999999986554

>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.64  E-value=1.5e-16  Score=128.96  Aligned_cols=93  Identities=16%  Similarity=0.333  Sum_probs=82.3

Q ss_pred             ccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC---HHHHHHHHHHhCCCCCCCcEEEeCCEEE
Q 048504          122 IRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD---SAYKKELQCVFGGKNVTLPQVFIRGKHV  198 (277)
Q Consensus       122 i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d---~~~reELke~lG~~~~tvPqVFI~G~~I  198 (277)
                      +...+..++|+||++++|      ++|++++.+|+.++++|+++||+.+   ++++++|.+.+|.  .++|+|||||++|
T Consensus        20 ~~~~i~~~~vvvf~~~~C------p~C~~~~~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~--~~vP~l~i~G~~i   91 (130)
T 2cq9_A           20 IQETISDNCVVIFSKTSC------SYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGE--RTVPRIFVNGTFI   91 (130)
T ss_dssp             HHHHHHHSSEEEEECSSC------SHHHHHHHHHHHHTCCCEEEETTTSTTHHHHHHHHHHHHSS--CCSSEEEETTEEE
T ss_pred             HHHHHcCCcEEEEEcCCC------hHHHHHHHHHHHcCCCcEEEECcCCcCcHHHHHHHHHHhCC--CCcCEEEECCEEE
Confidence            333445568999999875      7999999999999999999999987   7788899999976  8999999999999


Q ss_pred             echhHHHHHHhhccHHHHhcCCCC
Q 048504          199 GNADVLKSMYETGELARVLDGFPR  222 (277)
Q Consensus       199 GG~del~~L~EsGeL~klL~~~~~  222 (277)
                      ||++++.++++.|+|.++|+.++.
T Consensus        92 gg~~~l~~~~~~~~L~~~L~~~g~  115 (130)
T 2cq9_A           92 GGATDTHRLHKEGKLLPLVHQCYL  115 (130)
T ss_dssp             EEHHHHHHHHHHTSSHHHHHHHSS
T ss_pred             cChHHHHHHHHcCcHHHHHHHcCc
Confidence            999999999999999999987543

>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*

Probab=99.63  E-value=3e-16  Score=130.85  Aligned_cols=94  Identities=16%  Similarity=0.330  Sum_probs=83.0

Q ss_pred             cccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC---HHHHHHHHHHhCCCCCCCcEEEeCCEE
Q 048504          121 SIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD---SAYKKELQCVFGGKNVTLPQVFIRGKH  197 (277)
Q Consensus       121 ~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d---~~~reELke~lG~~~~tvPqVFI~G~~  197 (277)
                      .+...+..++|+||++++|      ++|.+++.+|+.++++|.++||+.+   ++++++|.+.+|.  .++|+|||||++
T Consensus        41 ~~~~~i~~~~Vvvf~~~~C------p~C~~~k~~L~~~~i~~~~vdId~~~~~~~~~~~L~~~~g~--~tvP~ifi~G~~  112 (146)
T 2ht9_A           41 QIQETISDNCVVIFSKTSC------SYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGE--RTVPRIFVNGTF  112 (146)
T ss_dssp             HHHHHHHHCSEEEEECTTC------HHHHHHHHHHHHHTCCCEEEEGGGCTTHHHHHHHHHHHHSC--CCSCEEEETTEE
T ss_pred             HHHHHhcCCCEEEEECCCC------hhHHHHHHHHHHcCCCeEEEECccCcCCHHHHHHHHHHhCC--CCcCeEEECCEE
Confidence            3444445668999999875      8999999999999999999999987   7788899999986  899999999999


Q ss_pred             EechhHHHHHHhhccHHHHhcCCCC
Q 048504          198 VGNADVLKSMYETGELARVLDGFPR  222 (277)
Q Consensus       198 IGG~del~~L~EsGeL~klL~~~~~  222 (277)
                      |||++++.++++.|+|.++|+.++.
T Consensus       113 igG~d~l~~l~~~g~L~~~L~~~g~  137 (146)
T 2ht9_A          113 IGGATDTHRLHKEGKLLPLVHQCYL  137 (146)
T ss_dssp             EESHHHHHHHHHTTCHHHHHHHTTC
T ss_pred             EeCchHHHHHHHcChHHHHHHHcCc
Confidence            9999999999999999999987643

>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}

Probab=99.58  E-value=6.8e-15  Score=114.71  Aligned_cols=67  Identities=24%  Similarity=0.343  Sum_probs=60.2

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHh-CCCCCCCcEEEe-CCEEEechh
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVF-GGKNVTLPQVFI-RGKHVGNAD  202 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~l-G~~~~tvPqVFI-~G~~IGG~d  202 (277)
                      ..+|+||++++|      |+|.+||++|+.+||+|+++||+.|++.++++.++. |.  .++|+||| ||..++|++
T Consensus         3 ta~I~vYs~~~C------p~C~~aK~~L~~~gi~y~~idi~~d~~~~~~~~~~~~G~--~tVP~I~i~Dg~~l~~~~   71 (92)
T 2lqo_A            3 TAALTIYTTSWC------GYCLRLKTALTANRIAYDEVDIEHNRAAAEFVGSVNGGN--RTVPTVKFADGSTLTNPS   71 (92)
T ss_dssp             SSCEEEEECTTC------SSHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHHHSSSS--SCSCEEEETTSCEEESCC
T ss_pred             CCcEEEEcCCCC------HhHHHHHHHHHhcCCceEEEEcCCCHHHHHHHHHHcCCC--CEeCEEEEeCCEEEeCCC
Confidence            457999999975      799999999999999999999999999999999987 44  89999999 688888864

>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*

Probab=99.56  E-value=1.2e-14  Score=107.18  Aligned_cols=75  Identities=20%  Similarity=0.241  Sum_probs=64.3

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHH--HHHHHHHHhCC---CCCCCcEEEeCCEEEechhHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSA--YKKELQCVFGG---KNVTLPQVFIRGKHVGNADVL  204 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~--~reELke~lG~---~~~tvPqVFI~G~~IGG~del  204 (277)
                      +|+||++++      |++|++|+.+|+.++++|++++|+.+..  .+++|.++.|.   ...++|+|||||++|||++++
T Consensus         5 ~v~ly~~~~------Cp~C~~~~~~L~~~~i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i~g~~i~g~~~i   78 (89)
T 3msz_A            5 KVKIYTRNG------CPYCVWAKQWFEENNIAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFIDDEHIGGFTEL   78 (89)
T ss_dssp             CEEEEECTT------CHHHHHHHHHHHHTTCCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEETTEEEESHHHH
T ss_pred             EEEEEEcCC------ChhHHHHHHHHHHcCCCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEECCEEEeChHHH
Confidence            599999986      5899999999999999999998876544  56788888865   236999999999999999999


Q ss_pred             HHHHhh
Q 048504          205 KSMYET  210 (277)
Q Consensus       205 ~~L~Es  210 (277)
                      .+++++
T Consensus        79 ~~~~~~   84 (89)
T 3msz_A           79 KANADK   84 (89)
T ss_dssp             HHTHHH
T ss_pred             HHHHHH
Confidence            998764

>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A

Probab=99.45  E-value=5.6e-14  Score=102.89  Aligned_cols=77  Identities=18%  Similarity=0.223  Sum_probs=66.4

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh-----CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG-----FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVL  204 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~-----~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del  204 (277)
                      +|++|++++|      ++|++++.+|+.     .+|+|.++|+..++..+++|.+..|....++|+||+||++|||++++
T Consensus         2 ~v~~f~~~~C------~~C~~~~~~l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~~~g~~i~~~~~l   75 (85)
T 1ego_A            2 QTVIFGRSGC------PYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFVDQQHIGGYTDF   75 (85)
T ss_dssp             EEEEECCTTS------THHHHHHHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEEETTEEEESSHHH
T ss_pred             EEEEEeCCCC------CCHHHHHHHHHHHHhcCCCceEEEEecccChHHHHHHHHHhCCCCceeCeEEECCEEEECHHHH
Confidence            5899999875      799999999998     88999999998765556788888873348999999999999999999


Q ss_pred             HHHHhhcc
Q 048504          205 KSMYETGE  212 (277)
Q Consensus       205 ~~L~EsGe  212 (277)
                      .++.++|-
T Consensus        76 ~~~~~~~~   83 (85)
T 1ego_A           76 AAWVKENL   83 (85)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhc
Confidence            99988763

>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*

Probab=99.43  E-value=1.1e-13  Score=135.81  Aligned_cols=91  Identities=21%  Similarity=0.345  Sum_probs=82.0

Q ss_pred             cccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC---HHHHHHHHHHhCCCCCCCcEEEeCCEE
Q 048504          121 SIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD---SAYKKELQCVFGGKNVTLPQVFIRGKH  197 (277)
Q Consensus       121 ~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d---~~~reELke~lG~~~~tvPqVFI~G~~  197 (277)
                      +++..+.+++|+||++++      ||+|.+++++|+.++++|+++||+.+   ++++++|++++|.  .++|+|||+|++
T Consensus        10 ~v~~~i~~~~v~vy~~~~------Cp~C~~~k~~L~~~~i~~~~~dv~~~~~~~~~~~~l~~~~g~--~tvP~v~i~g~~   81 (598)
T 2x8g_A           10 WLRKTVDSAAVILFSKTT------CPYCKKVKDVLAEAKIKHATIELDQLSNGSAIQKCLASFSKI--ETVPQMFVRGKF   81 (598)
T ss_dssp             HHHHHHHHCSEEEEECTT------CHHHHHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHTHHHHSC--CCSCEEEETTEE
T ss_pred             HHHHHhccCCEEEEECCC------ChhHHHHHHHHHHCCCCcEEEEcccCcchHHHHHHHHHHhCC--ceeCEEEECCEE
Confidence            455555678999999986      58999999999999999999999875   6788999999886  899999999999


Q ss_pred             EechhHHHHHHhhccHHHHhcC
Q 048504          198 VGNADVLKSMYETGELARVLDG  219 (277)
Q Consensus       198 IGG~del~~L~EsGeL~klL~~  219 (277)
                      |||++++.++++.|+|+++|..
T Consensus        82 igG~~~l~~~~~~g~L~~~l~~  103 (598)
T 2x8g_A           82 IGDSQTVLKYYSNDELAGIVNE  103 (598)
T ss_dssp             EECHHHHHHHHHTTCHHHHHHC
T ss_pred             EEeeehhhhhhhcCcchhhccc
Confidence            9999999999999999999964

>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}

Probab=99.38  E-value=1.5e-12  Score=100.71  Aligned_cols=69  Identities=16%  Similarity=0.149  Sum_probs=57.5

Q ss_pred             CCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC-HHH----HHHHHHHhCCCCCCCcEEEeCC-EEEec
Q 048504          127 TEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD-SAY----KKELQCVFGGKNVTLPQVFIRG-KHVGN  200 (277)
Q Consensus       127 ~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d-~~~----reELke~lG~~~~tvPqVFI~G-~~IGG  200 (277)
                      ..++|+||++++|      |+|++++.+|+.++++|+++||+.+ .+.    .++|++..|.  .++|+|||+| ++|||
T Consensus        20 ~~~~v~ly~~~~C------p~C~~ak~~L~~~~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~--~~vP~l~i~~~~~igg   91 (103)
T 3nzn_A           20 DRGKVIMYGLSTC------VWCKKTKKLLTDLGVDFDYVYVDRLEGKEEEEAVEEVRRFNPS--VSFPTTIINDEKAIVG   91 (103)
T ss_dssp             CCSCEEEEECSSC------HHHHHHHHHHHHHTBCEEEEEGGGCCHHHHHHHHHHHHHHCTT--CCSCEEEETTTEEEES
T ss_pred             CCCeEEEEcCCCC------chHHHHHHHHHHcCCCcEEEEeeccCcccHHHHHHHHHHhCCC--CccCEEEECCCEEEEc
Confidence            4578999999875      8999999999999999999999873 433    3444455565  8999999999 99999


Q ss_pred             hhH
Q 048504          201 ADV  203 (277)
Q Consensus       201 ~de  203 (277)
                      +++
T Consensus        92 ~~~   94 (103)
T 3nzn_A           92 FKE   94 (103)
T ss_dssp             CCH
T ss_pred             CCH
Confidence            976

>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10

Probab=99.38  E-value=8.6e-13  Score=115.05  Aligned_cols=75  Identities=24%  Similarity=0.417  Sum_probs=66.4

Q ss_pred             CCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHH
Q 048504          125 PGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVL  204 (277)
Q Consensus       125 ~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del  204 (277)
                      +..+.+|+||++++      |++|++|+.+|+.++|+|+++||..++. +++|++.+|.  .++|+|||||++|||++++
T Consensus       166 ~i~~~~i~ly~~~~------Cp~C~~a~~~L~~~~i~~~~~~i~~~~~-~~~l~~~~g~--~~vP~~~~~g~~i~g~~~i  236 (241)
T 1nm3_A          166 HQVQESISIFTKPG------CPFCAKAKQLLHDKGLSFEEIILGHDAT-IVSVRAVSGR--TTVPQVFIGGKHIGGSDDL  236 (241)
T ss_dssp             SCCCCCEEEEECSS------CHHHHHHHHHHHHHTCCCEEEETTTTCC-HHHHHHHTCC--SSSCEEEETTEEEESHHHH
T ss_pred             ccccceEEEEECCC------ChHHHHHHHHHHHcCCceEEEECCCchH-HHHHHHHhCC--CCcCEEEECCEEEECHHHH
Confidence            45678899999986      5899999999999999999999998854 4889999876  8999999999999999999


Q ss_pred             HHHH
Q 048504          205 KSMY  208 (277)
Q Consensus       205 ~~L~  208 (277)
                      .++.
T Consensus       237 ~~~l  240 (241)
T 1nm3_A          237 EKYF  240 (241)
T ss_dssp             HHC-
T ss_pred             HHHh
Confidence            8764

>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}

Probab=99.36  E-value=1.4e-12  Score=97.52  Aligned_cols=68  Identities=15%  Similarity=0.139  Sum_probs=58.6

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCC-----CHHHHHHHHHHhCCCCCCCcEEEeCCEEEechh
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSM-----DSAYKKELQCVFGGKNVTLPQVFIRGKHVGNAD  202 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~-----d~~~reELke~lG~~~~tvPqVFI~G~~IGG~d  202 (277)
                      +.+|+||++++|      ++|++++.+|+.++++|+++||+.     ++++.++|.+..|.  .++|+||+||++|||++
T Consensus        11 M~~v~ly~~~~C------p~C~~~~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~--~~vP~l~~~g~~i~G~~   82 (92)
T 3ic4_A           11 MAEVLMYGLSTC------PHCKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGS--YSVPVVVKGDKHVLGYN   82 (92)
T ss_dssp             CSSSEEEECTTC------HHHHHHHHHHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSS--SCSCEEEETTEEEESCC
T ss_pred             CceEEEEECCCC------hHHHHHHHHHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCC--CCcCEEEECCEEEeCCC
Confidence            467999999865      899999999999999999999984     23445888888876  79999999999999985


Q ss_pred             H
Q 048504          203 V  203 (277)
Q Consensus       203 e  203 (277)
                      .
T Consensus        83 ~   83 (92)
T 3ic4_A           83 E   83 (92)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A

Probab=99.28  E-value=6.7e-12  Score=96.73  Aligned_cols=90  Identities=21%  Similarity=0.306  Sum_probs=77.1

Q ss_pred             CCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHH---HHHHHHHHhCCCCCCCcEEEeCCEEEechh
Q 048504          126 GTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSA---YKKELQCVFGGKNVTLPQVFIRGKHVGNAD  202 (277)
Q Consensus       126 ~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~---~reELke~lG~~~~tvPqVFI~G~~IGG~d  202 (277)
                      ....+|++|+++||      ++|++++.+|+.++++|..+||+.++.   .+.+|.+.+|.  .++|++|++|+.|||++
T Consensus        17 ~~~~~vv~f~a~~C------~~C~~~~~~l~~~~~~~~~v~v~~~~~~~~~~~~l~~~~~v--~~~Pt~~~~g~~v~~~~   88 (116)
T 2e7p_A           17 ASSAPVVVFSKTYC------GYCNRVKQLLTQVGASYKVVELDELSDGSQLQSALAHWTGR--GTVPNVFIGGKQIGGCD   88 (116)
T ss_dssp             HTSSSEEEEECTTC------HHHHHHHHHHHHHTCCCEEEEGGGSTTHHHHHHHHHHHHSC--CSSCEEEETTEEEECHH
T ss_pred             HcCCCEEEEECCCC------hhHHHHHHHHHHcCCCeEEEEccCCCChHHHHHHHHHHhCC--CCcCEEEECCEEECChH
Confidence            34567999999985      799999999999999999999987653   45678888875  79999999999999999


Q ss_pred             HHHHHHhhccHHHHhcCCCCC
Q 048504          203 VLKSMYETGELARVLDGFPRR  223 (277)
Q Consensus       203 el~~L~EsGeL~klL~~~~~~  223 (277)
                      .+..++..++|.++|+.++..
T Consensus        89 ~~~~~~~~~~l~~~l~~~g~~  109 (116)
T 2e7p_A           89 TVVEKHQRNELLPLLQDAAAT  109 (116)
T ss_dssp             HHHHHHHTTCHHHHHHHTTC-
T ss_pred             HHHHHHhCChHHHHHHHcccc
Confidence            999999999999999876543

>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1

Probab=99.27  E-value=1.5e-11  Score=89.44  Aligned_cols=75  Identities=16%  Similarity=0.109  Sum_probs=62.8

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHHh
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYE  209 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~E  209 (277)
                      +|++|++++|      ++|++++.+|+.++|+|.++|++.+++..+++++ +|.  .++|++|++|+++||++.      
T Consensus         2 ~v~~f~~~~C------~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~~-~g~--~~vP~~~~~g~~~~g~~~------   66 (81)
T 1h75_A            2 RITIYTRNDC------VQCHATKRAMENRGFDFEMINVDRVPEAAEALRA-QGF--RQLPVVIAGDLSWSGFRP------   66 (81)
T ss_dssp             CEEEEECTTC------HHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHH-TTC--CSSCEEEETTEEEESCCH------
T ss_pred             EEEEEcCCCC------hhHHHHHHHHHHCCCCeEEEECCCCHHHHHHHHH-hCC--CccCEEEECCEEEecCCH------
Confidence            5899999875      8999999999999999999999999888777765 554  799999999999999863      


Q ss_pred             hccHHHHhcCC
Q 048504          210 TGELARVLDGF  220 (277)
Q Consensus       210 sGeL~klL~~~  220 (277)
                       .+|+++|+..
T Consensus        67 -~~l~~~l~~~   76 (81)
T 1h75_A           67 -DMINRLHPAP   76 (81)
T ss_dssp             -HHHGGGSCCC
T ss_pred             -HHHHHHHhcc
Confidence             2466666543

>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1

Probab=99.23  E-value=7e-11  Score=84.11  Aligned_cols=73  Identities=18%  Similarity=0.270  Sum_probs=61.2

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHHh
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYE  209 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~E  209 (277)
                      +|++|++++|      ++|++++.+|+.++|+|+.+|++.+++..++++ ..|.  .++|++++||+++||++.      
T Consensus         2 ~i~~y~~~~C------~~C~~~~~~l~~~~i~~~~~di~~~~~~~~~~~-~~~~--~~vP~l~~~g~~~~g~~~------   66 (75)
T 1r7h_A            2 SITLYTKPAC------VQCTATKKALDRAGLAYNTVDISLDDEARDYVM-ALGY--VQAPVVEVDGEHWSGFRP------   66 (75)
T ss_dssp             CEEEEECTTC------HHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHH-HTTC--BCCCEEEETTEEEESCCH------
T ss_pred             eEEEEeCCCC------hHHHHHHHHHHHcCCCcEEEECCCCHHHHHHHH-HcCC--CccCEEEECCeEEcCCCH------
Confidence            5899999875      899999999999999999999999988777774 4654  789999999999999863      


Q ss_pred             hccHHHHhc
Q 048504          210 TGELARVLD  218 (277)
Q Consensus       210 sGeL~klL~  218 (277)
                       .+|+++|+
T Consensus        67 -~~l~~~l~   74 (75)
T 1r7h_A           67 -ERIKQLQA   74 (75)
T ss_dssp             -HHHHHHHC
T ss_pred             -HHHHHHHh
Confidence             24666653

>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1

Probab=98.95  E-value=3.7e-09  Score=81.69  Aligned_cols=76  Identities=11%  Similarity=0.245  Sum_probs=59.3

Q ss_pred             CCCcEEEEEecCCCCCCCChhHHHHHHHHH--hCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEE--Eechh
Q 048504          127 TEDRIVVYLTSLRGIRRTFEDCYAVRMIFR--GFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKH--VGNAD  202 (277)
Q Consensus       127 ~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~--~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~--IGG~d  202 (277)
                      ....|++|++++|      ++|++++.+|+  ..+|+|.++||+. ++. .+|.+.+|   .++|+||+||+.  +||++
T Consensus        15 ~~~~v~~f~~~~C------~~C~~~~~~L~~l~~~i~~~~vdi~~-~~~-~el~~~~g---~~vP~l~~~g~~~~~~g~~   83 (100)
T 1wjk_A           15 ALPVLTLFTKAPC------PLCDEAKEVLQPYKDRFILQEVDITL-PEN-STWYERYK---FDIPVFHLNGQFLMMHRVN   83 (100)
T ss_dssp             CCCEEEEEECSSC------HHHHHHHHHTSTTSSSSEEEEEETTS-STT-HHHHHHSS---SSCSEEEESSSEEEESSCC
T ss_pred             CCCEEEEEeCCCC------cchHHHHHHHHHhhhCCeEEEEECCC-cch-HHHHHHHC---CCCCEEEECCEEEEecCCC
Confidence            3456999999875      79999999999  6789999999982 222 56777775   589999999998  78875


Q ss_pred             HHHHHHhhccHHHHhcCC
Q 048504          203 VLKSMYETGELARVLDGF  220 (277)
Q Consensus       203 el~~L~EsGeL~klL~~~  220 (277)
                      .       .+|+++|+.+
T Consensus        84 ~-------~~l~~~l~~~   94 (100)
T 1wjk_A           84 T-------SKLEKQLRKL   94 (100)
T ss_dssp             H-------HHHHHHHHSS
T ss_pred             H-------HHHHHHHHHH
Confidence            3       3477777654

>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}

Probab=98.95  E-value=8.5e-10  Score=80.83  Aligned_cols=71  Identities=13%  Similarity=0.141  Sum_probs=56.4

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHH----HHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCE--EEechh
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRM----IFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGK--HVGNAD  202 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~----iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~--~IGG~d  202 (277)
                      ++|+||++++|      ++|++++.    +++.++++|..+||+.|.+.. ++.+.+|.  .++|+|||||+  ++|+..
T Consensus         2 ~~~~~f~~~~C------~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~gv--~~vPt~~i~g~~~~~G~~~   72 (80)
T 2k8s_A            2 ASKAIFYHAGC------PVCVSAEQAVANAIDPSKYTVEIVHLGTDKARI-AEAEKAGV--KSVPALVIDGAAFHINFGA   72 (80)
T ss_dssp             CEEEEEEECSC------HHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTH-HHHHHHTC--CEEEEEEETTEEEEEEEEE
T ss_pred             cceEEEeCCCC------CchHHHHHHHHHHHHhcCCeEEEEEecCChhhH-HHHHHcCC--CcCCEEEECCEEEEeccCc
Confidence            46999999975      79999999    777788999999998753333 34456665  79999999999  889877


Q ss_pred             HHHHHH
Q 048504          203 VLKSMY  208 (277)
Q Consensus       203 el~~L~  208 (277)
                      +..+|.
T Consensus        73 ~~~~l~   78 (80)
T 2k8s_A           73 GIDDLK   78 (80)
T ss_dssp             EHHHHC
T ss_pred             CHHHhh
Confidence            666654

>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A

Probab=98.78  E-value=2.5e-08  Score=76.29  Aligned_cols=59  Identities=15%  Similarity=0.133  Sum_probs=50.5

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCe-EEEEECCCCHHHHHHHHHHhCCCCCCCcEEE-eCCEEEech
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVW-VDERDVSMDSAYKKELQCVFGGKNVTLPQVF-IRGKHVGNA  201 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~-y~ErDVs~d~~~reELke~lG~~~~tvPqVF-I~G~~IGG~  201 (277)
                      +|++|++++|      +.|+.++.+|+..+++ |.++||+.|++    |.+.+|.  . +|+|+ +||+.++|.
T Consensus         2 ~vv~f~a~~C------~~C~~~~~~L~~~~~~~~~~vdid~~~~----l~~~~g~--~-vPtl~~~~G~~v~g~   62 (87)
T 1ttz_A            2 ALTLYQRDDC------HLCDQAVEALAQARAGAFFSVFIDDDAA----LESAYGL--R-VPVLRDPMGRELDWP   62 (87)
T ss_dssp             CEEEEECSSC------HHHHHHHHHHHHTTCCCEEEEECTTCHH----HHHHHTT--T-CSEEECTTCCEEESC
T ss_pred             EEEEEECCCC------chHHHHHHHHHHHHHhheEEEECCCCHH----HHHHhCC--C-cCeEEEECCEEEeCC
Confidence            5999999986      7999999999999997 89999999875    4445664  4 99999 899999754

>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}

Probab=98.68  E-value=5.4e-08  Score=77.79  Aligned_cols=58  Identities=12%  Similarity=0.157  Sum_probs=49.7

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHh----CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEE
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRG----FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHV  198 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~----~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~I  198 (277)
                      +..|++|++++|      ++|+.++.+|+.    ++|+|.++||+.|+++    .+.+|.   .+|+|  |+||+.+
T Consensus        29 m~~vv~y~~~~C------~~C~~a~~~L~~l~~e~~i~~~~vDId~d~~l----~~~ygv---~VP~l~~~~dG~~v   92 (107)
T 2fgx_A           29 PRKLVVYGREGC------HLCEEMIASLRVLQKKSWFELEVINIDGNEHL----TRLYND---RVPVLFAVNEDKEL   92 (107)
T ss_dssp             CCCEEEEECSSC------HHHHHHHHHHHHHHHHSCCCCEEEETTTCHHH----HHHSTT---SCSEEEETTTTEEE
T ss_pred             ccEEEEEeCCCC------hhHHHHHHHHHHHHHhcCCeEEEEECCCCHHH----HHHhCC---CCceEEEEECCEEE
Confidence            457999999986      799999999998    8999999999998754    445664   49999  9999988

>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12

Probab=98.43  E-value=2.6e-07  Score=73.40  Aligned_cols=68  Identities=15%  Similarity=0.120  Sum_probs=53.0

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH---HHHHHHHHHhC---------------C---C----
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS---AYKKELQCVFG---------------G---K----  184 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~---~~reELke~lG---------------~---~----  184 (277)
                      .|+||+++.      |++|++|+++|+.+||+|+++||..++   +..+++.+.+|               .   .    
T Consensus         1 ~i~iY~~~~------C~~C~kak~~L~~~gi~~~~~di~~~~~~~~~l~~~~~~~g~~~l~n~~~~~~k~l~~~~~~~~~   74 (114)
T 1rw1_A            1 TYVLYGIKA------CDTMKKARTWLDEHKVAYDFHDYKAVGIDREHLRRWCAEHGWQTVLNRAGTTFRKLDEAQKADLD   74 (114)
T ss_dssp             CEEEEECSS------CHHHHHHHHHHHHTTCCEEEEEHHHHCCCHHHHHHHHHHHCHHHHBCTTSHHHHTSCHHHHTTCC
T ss_pred             CEEEEECCC------ChHHHHHHHHHHHCCCceEEEeecCCCCCHHHHHHHHHhCChHHhccCCcHhHHhcCccccccCC
Confidence            389999986      589999999999999999999998654   44455555555               0   0    


Q ss_pred             -------------CCCCcEEEeCCEEEechhH
Q 048504          185 -------------NVTLPQVFIRGKHVGNADV  203 (277)
Q Consensus       185 -------------~~tvPqVFI~G~~IGG~de  203 (277)
                                   ....|.|.++|+.+-|+++
T Consensus        75 ~~~~~~~l~~~p~likrPiv~~~~~~~vGf~~  106 (114)
T 1rw1_A           75 EAKAIELMLAQPSMIKRPVLELGGRTLVGFKP  106 (114)
T ss_dssp             HHHHHHHHHHCGGGBCSCEEECSSCEEESCCH
T ss_pred             HHHHHHHHHhChhheeCcEEEECCEEEEeCCH
Confidence                         1468999999998888764

>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A

Probab=98.40  E-value=4.5e-07  Score=73.80  Aligned_cols=68  Identities=10%  Similarity=0.152  Sum_probs=55.6

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhC---CC----------------------
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG---GK----------------------  184 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG---~~----------------------  184 (277)
                      .|+||+++.      |++|++|+.+|+.+||+|+++||..++..+++|+++++   ..                      
T Consensus         2 mi~lY~~~~------C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~~~~~l   75 (132)
T 1z3e_A            2 MVTLYTSPS------CTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNVNVESM   75 (132)
T ss_dssp             CEEEEECTT------CHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHHTCSSCGGGTBCTTSHHHHHHCCCGGGS
T ss_pred             eEEEEeCCC------ChHHHHHHHHHHHcCCceEEEEccCCCccHHHHHHHHHHcCCCHHHhhcCCchHHHhcCcccccC
Confidence            489999986      58999999999999999999999988777777777652   10                      


Q ss_pred             --------------CCCCcEEEeCCEEEechhH
Q 048504          185 --------------NVTLPQVFIRGKHVGNADV  203 (277)
Q Consensus       185 --------------~~tvPqVFI~G~~IGG~de  203 (277)
                                    ....|.|.++|+.+-|+++
T Consensus        76 s~~~~~~~l~~~p~likrPiv~~~~~~~vGf~~  108 (132)
T 1z3e_A           76 PLQDLYRLINEHPGLLRRPIIIDEKRLQVGYNE  108 (132)
T ss_dssp             BHHHHHHHHHHCGGGBCSCEEECSSCEEESCCT
T ss_pred             CHHHHHHHHHhCccceeCCEEEECCEEEEcCCH
Confidence                          0368999999998888763

>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19

Probab=98.37  E-value=3.3e-07  Score=84.32  Aligned_cols=67  Identities=21%  Similarity=0.284  Sum_probs=48.8

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhC----CC---eEEEEECC----CCH----HH---HHHHHHHhCCCCCCC--
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGF----RV---WVDERDVS----MDS----AY---KKELQCVFGGKNVTL--  188 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~----gV---~y~ErDVs----~d~----~~---reELke~lG~~~~tv--  188 (277)
                      ..|.|||+.+      |++|.+|+.+|+.+    +|   .|++.+++    .|+    ++   .+++.+..|.  .++  
T Consensus        44 ~~VelyTs~g------Cp~C~~Ak~lL~~~~~~~~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~--~tVyT  115 (270)
T 2axo_A           44 GVVELFTSQG------CASCPPADEALRKMIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGR--NGVYT  115 (270)
T ss_dssp             CEEEEEECTT------CTTCHHHHHHHHHHHHHTSSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTC--SCCCS
T ss_pred             cEEEEEeCCC------CCChHHHHHHHHHhhccCCeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCC--CcccC
Confidence            5799999986      58999999999998    77   55522222    232    22   3345566676  678  


Q ss_pred             cEEEeCCE-EEechhH
Q 048504          189 PQVFIRGK-HVGNADV  203 (277)
Q Consensus       189 PqVFI~G~-~IGG~de  203 (277)
                      |||||||+ ++||+|.
T Consensus       116 PqI~Ing~~~v~G~d~  131 (270)
T 2axo_A          116 PQAILNGRDHVKGADV  131 (270)
T ss_dssp             SEEEETTTEEEETTCH
T ss_pred             CEEEECCEEeecCCCH
Confidence            99999999 8999974

>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}

Probab=98.35  E-value=4.5e-07  Score=72.68  Aligned_cols=68  Identities=10%  Similarity=0.012  Sum_probs=53.6

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH---HHHHHHHHHhCC--------------C--------
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS---AYKKELQCVFGG--------------K--------  184 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~---~~reELke~lG~--------------~--------  184 (277)
                      .|+||+++.      |++|++|+++|+.+||+|+++||..++   +..+++.+.+|-              +        
T Consensus         6 ~i~iY~~~~------C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~~l~~~~~~~g~~~l~n~~~~~~k~l~~~~~~~~~   79 (120)
T 2kok_A            6 SVTIYGIKN------CDTMKKARIWLEDHGIDYTFHDYKKEGLDAETLDRFLKTVPWEQLLNRAGTTFRKLPEDVRSNVD   79 (120)
T ss_dssp             CEEEEECSS------CHHHHHHHHHHHHHTCCEEEEEHHHHCCCHHHHHHHHHHSCGGGTBCSSSHHHHHSCHHHHHSCC
T ss_pred             EEEEEECCC------ChHHHHHHHHHHHcCCcEEEEeeeCCCCCHHHHHHHHHHcChHhhccCCchhhHhcCchhhccCC
Confidence            599999986      589999999999999999999997654   444455555550              0        


Q ss_pred             -------------CCCCcEEEeCCEEEechhH
Q 048504          185 -------------NVTLPQVFIRGKHVGNADV  203 (277)
Q Consensus       185 -------------~~tvPqVFI~G~~IGG~de  203 (277)
                                   ....|.|.++++.+-|+++
T Consensus        80 ~~~~~~~l~~~p~likrPiv~~~~~~~vGf~~  111 (120)
T 2kok_A           80 AASARELMLAQPSMVKRPVLERDGKLMVGFKP  111 (120)
T ss_dssp             HHHHHHHHHHCGGGBCSSEEEETTEEEECCCH
T ss_pred             HHHHHHHHHhCcccEECCEEEECCEEEEeCCH
Confidence                         1468999999998888764

>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12

Probab=97.82  E-value=2.3e-05  Score=62.94  Aligned_cols=46  Identities=15%  Similarity=0.327  Sum_probs=41.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG  182 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG  182 (277)
                      |+||+++.      |++|++|+++|+.+||+|+++|+..++..+++|+++++
T Consensus         2 i~iY~~~~------C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~l~   47 (120)
T 3l78_A            2 VTLFLSPS------CTSCRKARAWLNRHDVVFQEHNIMTSPLSRDELLKILS   47 (120)
T ss_dssp             EEEEECSS------CHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHH
T ss_pred             EEEEeCCC------CHHHHHHHHHHHHcCCCeEEEecccCCCcHHHHHHHHh
Confidence            78999986      58999999999999999999999998888888888875

>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A

Probab=97.79  E-value=7.7e-06  Score=67.89  Aligned_cols=49  Identities=10%  Similarity=-0.004  Sum_probs=42.2

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCC
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGG  183 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~  183 (277)
                      ..|+||+++.      |++|++|+++|+.+||+|+++|+..++..+++|.++++.
T Consensus         2 ~~itiY~~p~------C~~crkak~~L~~~gi~~~~idi~~~~~~~~eL~~~~~~   50 (141)
T 1s3c_A            2 SNITIYHNPA------SGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIAD   50 (141)
T ss_dssp             -CCEEECCTT------CHHHHHHHHHHHHTTCCCEEECTTTSCCCHHHHHHHHHH
T ss_pred             CcEEEEECCC------ChHHHHHHHHHHHcCCCEEEEECCCCCccHHHHHHHhcc
Confidence            3689999985      589999999999999999999999987777888777653

>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}

Probab=97.77  E-value=1.4e-05  Score=64.48  Aligned_cols=50  Identities=4%  Similarity=-0.053  Sum_probs=43.0

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCC
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGG  183 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~  183 (277)
                      +..|+||+++.      |+.|++|+++|+.+||+|+++|+..++..+++|.++++.
T Consensus         4 M~~i~iY~~p~------C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~   53 (121)
T 3rdw_A            4 MKDVTIYHNPR------CSKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQ   53 (121)
T ss_dssp             --CCEEECCTT------CHHHHHHHHHHHTTTCCCEEECTTTSCCCHHHHHHHHHH
T ss_pred             CCcEEEEECCC------CHHHHHHHHHHHHcCCCcEEEeeccCCCcHHHHHHHHHh
Confidence            45699999985      589999999999999999999999988888888887753

>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0

Probab=97.74  E-value=2.6e-05  Score=62.87  Aligned_cols=47  Identities=11%  Similarity=0.090  Sum_probs=41.9

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhC
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG  182 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG  182 (277)
                      .|+||+++.      |+.|++|+++|+.+||+|+++|+..++..+++|.++++
T Consensus         5 ~i~iY~~p~------C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~   51 (120)
T 3gkx_A            5 KTLFLQYPA------CSTCQKAKKWLIENNIEYTNRLIVDDNPTVEELKAWIP   51 (120)
T ss_dssp             CCEEEECTT------CHHHHHHHHHHHHTTCCCEEEETTTTCCCHHHHHHHHH
T ss_pred             EEEEEECCC------ChHHHHHHHHHHHcCCceEEEecccCcCCHHHHHHHHH
Confidence            489999985      58999999999999999999999998888888877764

>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0

Probab=97.69  E-value=3.6e-05  Score=62.03  Aligned_cols=48  Identities=8%  Similarity=0.090  Sum_probs=42.6

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCC
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGG  183 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~  183 (277)
                      -|+||+++.      |+.|++|+++|+.+||+|+++|+..++..+++|.++++.
T Consensus         4 Mi~iY~~~~------C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~   51 (120)
T 3fz4_A            4 MLTFYEYPK------CSTCRRAKAELDDLAWDYDAIDIKKNPPAASLIRNWLEN   51 (120)
T ss_dssp             SEEEEECSS------CHHHHHHHHHHHHHTCCEEEEETTTSCCCHHHHHHHHHH
T ss_pred             eEEEEeCCC------ChHHHHHHHHHHHcCCceEEEEeccCchhHHHHHHHHHH
Confidence            489999986      589999999999999999999999998888888887753

>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1

Probab=97.66  E-value=3e-05  Score=55.16  Aligned_cols=60  Identities=20%  Similarity=0.313  Sum_probs=46.5

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCE--EEec
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGK--HVGN  200 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~--~IGG  200 (277)
                      -.|++|+++||      ++|+++...|+..      ++.|..+|++.+++    +.+.+|-  ..+|.++++|+  ++|.
T Consensus         3 ~~vv~f~~~~C------~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v--~~~Pt~~~~G~~~~~G~   70 (85)
T 1nho_A            3 VNIEVFTSPTC------PYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDRE----KAIEYGL--MAVPAIAINGVVRFVGA   70 (85)
T ss_dssp             CCEEEESCSSS------CCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGG----GGGGTCS--SCSSEEEETTTEEEECS
T ss_pred             EEEEEEECCCC------cchHHHHHHHHHHHHHhcCCeEEEEEECCCCHH----HHHhCCc--eeeCEEEECCEEEEccC
Confidence            36889999886      6999888877652      68999999998864    3344554  78999999998  6775

>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}

Probab=97.53  E-value=7.8e-05  Score=57.89  Aligned_cols=69  Identities=14%  Similarity=0.106  Sum_probs=51.8

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHH--HHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSA--YKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~--~reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      .||.|+++||      +.|+++..+|+...-.|..+|++.+..  ...+|.+..|-  ..+|.++|+|+.+.|..+...
T Consensus        15 ~vV~F~A~WC------~~C~~~~p~~~~~a~~~~~v~~~~~~~~~~~~~l~~~~~V--~~~PT~~i~G~~~~G~~~~~~   85 (106)
T 3kp8_A           15 GGTMYGAYWC------PHCQDQKELFGAAFDQVPYVECSPNGPGTPQAQECTEAGI--TSYPTWIINGRTYTGVRSLEA   85 (106)
T ss_dssp             TCEEEECTTC------HHHHHHHHHHGGGGGGSCEEESCTTCTTSCCCHHHHHTTC--CSSSEEEETTEEEESCCCHHH
T ss_pred             EEEEEECCCC------HHHHHHHHHHHHHHHhCCEEEEecccccchhHHHHHHcCC--eEeCEEEECCEEecCCCCHHH
Confidence            3899999986      799999999998766666777774322  23456666765  799999999998877665443

>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1

Probab=97.44  E-value=4.3e-05  Score=54.38  Aligned_cols=59  Identities=19%  Similarity=0.401  Sum_probs=44.0

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCE--EEec
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGK--HVGN  200 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~--~IGG  200 (277)
                      .|++|++++|      ++|+++...|+.    +  ++.+..+|++.++++    .+..|-  ..+|.++++|+  +.|.
T Consensus         5 ~vv~f~~~~C------~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~----~~~~~v--~~~Pt~~~~G~~~~~G~   71 (85)
T 1fo5_A            5 KIELFTSPMC------PHCPAAKRVVEEVANEMPDAVEVEYINVMENPQK----AMEYGI--MAVPTIVINGDVEFIGA   71 (85)
T ss_dssp             EEEEEECCCS------SCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCT----TTSTTT--CCSSEEEETTEEECCSS
T ss_pred             EEEEEeCCCC------CchHHHHHHHHHHHHHcCCceEEEEEECCCCHHH----HHHCCC--cccCEEEECCEEeeecC
Confidence            4788888876      699888877765    3  688999999877543    333443  68999999999  4554

>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}

Probab=97.39  E-value=4e-05  Score=61.65  Aligned_cols=47  Identities=11%  Similarity=0.101  Sum_probs=40.4

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhC
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG  182 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG  182 (277)
                      .|+||+++.      |+.|++|+++|+.+||+|+++|+..++..+++|.++++
T Consensus         5 ~i~iY~~p~------C~~c~ka~~~L~~~gi~~~~~di~~~~~t~~eL~~~l~   51 (119)
T 3f0i_A            5 SVVIYHNPK------CSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQ   51 (119)
T ss_dssp             CCEEECCTT------CHHHHHHHHHHHHTTCCCEEECHHHHCCCHHHHHHHHH
T ss_pred             EEEEEECCC------ChHHHHHHHHHHHcCCceEEEEeccCcCcHHHHHHHHH
Confidence            589999985      58999999999999999999999887666777776653

>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A

Probab=97.37  E-value=0.00045  Score=58.00  Aligned_cols=71  Identities=14%  Similarity=0.162  Sum_probs=56.6

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE-eCCEEEechhHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF-IRGKHVGNADVLKSM  207 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF-I~G~~IGG~del~~L  207 (277)
                      ++++||+...      ||+|.+|+.+|+.+||+|+.++|+.+..  +...++.+.  .++|.+. .||..|.+...+.+.
T Consensus         2 ~~~~Ly~~~~------sp~~~~v~~~l~~~gi~~~~~~v~~~~~--~~~~~~~p~--~~vP~l~~~~g~~l~eS~aI~~y   71 (218)
T 3ir4_A            2 NAMKLYIYDH------CPFCVKARMIFGLKNIPVELNVLQNDDE--ATPTRMIGQ--KMVPILQKDDSRYLPESMDIVHY   71 (218)
T ss_dssp             CCCEEEECTT------CHHHHHHHHHHHHHTCCCEEEECCTTCC--HHHHHHHSS--SCSCEEECTTSCEEECHHHHHHH
T ss_pred             CeEEEEcCCC------CchHHHHHHHHHHcCCceEEEECCCcch--hhhhhcCCC--ceeeeEEEeCCeEeeCHHHHHHH
Confidence            4689999975      5899999999999999999998876532  123566655  7899999 899999988887765


Q ss_pred             Hh
Q 048504          208 YE  209 (277)
Q Consensus       208 ~E  209 (277)
                      .+
T Consensus        72 L~   73 (218)
T 3ir4_A           72 VD   73 (218)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}

Probab=97.28  E-value=0.00016  Score=66.82  Aligned_cols=71  Identities=14%  Similarity=0.095  Sum_probs=52.1

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC-H-HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHH
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD-S-AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLK  205 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d-~-~~reELke~lG~~~~tvPqVFI~G~~IGG~del~  205 (277)
                      ...||.|+.+||      ++|++++.+|++..-.+..+|++.+ . +...++.+..|-  ..+|++|+||+.+.|..+..
T Consensus       198 ~~~vV~F~A~WC------~~Ck~l~p~le~lA~~l~~Vd~d~~d~~~~~~~la~~~gI--~~vPT~~i~G~~~~G~~~~~  269 (291)
T 3kp9_A          198 QIGGTMYGAYWC------PHCQDQKELFGAAFDQVPYVECSPNGPGTPQAQECTEAGI--TSYPTWIINGRTYTGVRSLE  269 (291)
T ss_dssp             HTTCEEEECTTC------HHHHHHHHHHGGGGGGSCEEESCSSCSSSCCCHHHHTTTC--CSTTEEEETTEEEESCCCHH
T ss_pred             CCCEEEEECCCC------HHHHHHHHHHHHHHHHcCEEEEeecCchhhHHHHHHHcCC--cccCeEEECCEEecCCCCHH
Confidence            345899999986      7999999999987544445666532 1 223456666664  79999999999998887655


Q ss_pred             H
Q 048504          206 S  206 (277)
Q Consensus       206 ~  206 (277)
                      +
T Consensus       270 ~  270 (291)
T 3kp9_A          270 A  270 (291)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3fy7_A Chloride intracellular channel protein 3; GST, glutathione, CLIC, chloride channel, ION transport, ionic channel, nucleus, transport, gated channel; 1.95A {Homo sapiens} PDB: 3kjy_A

Probab=97.09  E-value=0.0015  Score=56.86  Aligned_cols=78  Identities=12%  Similarity=0.120  Sum_probs=52.1

Q ss_pred             CCcEEEEEecCCC--CCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHH
Q 048504          128 EDRIVVYLTSLRG--IRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLK  205 (277)
Q Consensus       128 ~~kVVLYttSlcg--iR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~  205 (277)
                      ..+|.||.+....  .-..||+|.+|+.+|+.+||+|+.+.|+.. ...+++.++...  .++|.+.+||..|.....+.
T Consensus        23 ~~~i~l~~ka~~~~~s~~~sP~~~rv~~~L~~~gi~ye~~~v~~~-~~~~~~~~~nP~--g~VPvL~~dg~~l~ES~aI~   99 (250)
T 3fy7_A           23 ETKLQLFVKASEDGESVGHCPSCQRLFMVLLLKGVPFTLTTVDTR-RSPDVLKDFAPG--SQLPILLYDSDAKTDTLQIE   99 (250)
T ss_dssp             --CEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEEC-----------------CCSCEEEETTEEECCHHHHH
T ss_pred             CCCceEEEEeCCCCCCCCCChHHHHHHHHHHHcCCccEEEECCCc-cChHHHHhhCCC--CCCCEEEECCEEecCHHHHH
Confidence            4579999986543  225799999999999999999998888754 233466666543  68999999999998887777


Q ss_pred             HHH
Q 048504          206 SMY  208 (277)
Q Consensus       206 ~L~  208 (277)
                      +..
T Consensus       100 ~YL  102 (250)
T 3fy7_A          100 DFL  102 (250)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            643

>2cz2_A Maleylacetoacetate isomerase; structural genomics, GST, GSTZ1-1, NPPSFA, national project protein structural and functional analyses; HET: GSH; 1.40A {Mus musculus} PDB: 2cz3_A 1fw1_A*

Probab=97.09  E-value=0.0021  Score=54.16  Aligned_cols=73  Identities=11%  Similarity=0.103  Sum_probs=57.7

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH----HHHHHHHHHhCCCCCCCcEEEeCCEEEechhH
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS----AYKKELQCVFGGKNVTLPQVFIRGKHVGNADV  203 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~----~~reELke~lG~~~~tvPqVFI~G~~IGG~de  203 (277)
                      +.+++||+...      +++|.+|+.+|+.+||+|+.+.|+...    ....++.++...  .++|.+..||..|.....
T Consensus        10 ~~~~~Ly~~~~------sp~~~~v~~~L~~~gi~~e~~~v~~~~~~~e~~~~~~~~~nP~--g~vP~L~~~g~~l~eS~a   81 (223)
T 2cz2_A           10 AGKPILYSYFR------SSCSWRVRIALALKGIDYEIVPINLIKDGGQQFTEEFQTLNPM--KQVPALKIDGITIVQSLA   81 (223)
T ss_dssp             -CCCEEEECTT------CHHHHHHHHHHHHTTCCCEEEECCSSGGGCGGGSHHHHHHCTT--CCSCEEEETTEEEESHHH
T ss_pred             cCceEEEecCC------CChHHHHHHHHHhcCCCCeEEEeecccCchhhcCHHHhccCCC--CCCCEEEECCEEEeeHHH
Confidence            35689999875      589999999999999999999887643    234566677644  689999999999988887


Q ss_pred             HHHHH
Q 048504          204 LKSMY  208 (277)
Q Consensus       204 l~~L~  208 (277)
                      +.+..
T Consensus        82 I~~yL   86 (223)
T 2cz2_A           82 IMEYL   86 (223)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77643

>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase; HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*

Probab=97.08  E-value=0.0012  Score=56.23  Aligned_cols=74  Identities=9%  Similarity=0.066  Sum_probs=58.2

Q ss_pred             CCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe-CCEEEechhH
Q 048504          125 PGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI-RGKHVGNADV  203 (277)
Q Consensus       125 ~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI-~G~~IGG~de  203 (277)
                      +...++++||+...      |++|.+|+.+|+.+||+|+.+.|+... ..+++.++...  .++|.+.+ ||..|.....
T Consensus        18 ~~~~~~~~Ly~~~~------sp~~~~v~~~L~~~gi~ye~~~v~~~~-~~~~~~~~~P~--g~vP~L~~~~g~~l~eS~a   88 (241)
T 3vln_A           18 PVPEGSIRIYSMRF------SPFAERTRLVLKAKGIRHEVININLKN-KPEWFFKKNPF--GLVPVLENSQGQLIYESAI   88 (241)
T ss_dssp             CCCTTCEEEEECTT------CHHHHHHHHHHHHHTCCEEEEEBCTTS-CCTTHHHHCTT--CCSCEEECTTCCEEESHHH
T ss_pred             CCCCCeEEEEcCCC------CcHHHHHHHHHHHcCCCCeEEecCccc-CCHHHHHhCCC--CCCCEEEECCCcEEEcHHH
Confidence            34567899999976      489999999999999999998887542 22345666544  68999999 9988888777


Q ss_pred             HHHH
Q 048504          204 LKSM  207 (277)
Q Consensus       204 l~~L  207 (277)
                      +.+.
T Consensus        89 I~~y   92 (241)
T 3vln_A           89 TCEY   92 (241)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7664

>2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A*

Probab=97.05  E-value=0.0014  Score=56.71  Aligned_cols=78  Identities=14%  Similarity=0.105  Sum_probs=51.3

Q ss_pred             CCcEEEEEecCCC--CCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHH
Q 048504          128 EDRIVVYLTSLRG--IRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLK  205 (277)
Q Consensus       128 ~~kVVLYttSlcg--iR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~  205 (277)
                      +..++||......  -...||+|.+|+.+|+.+||+|+.+.|+.. ...+++.++...  .+||.|..||..|.....+.
T Consensus        11 ~~~i~ly~~~~~~~~~~~~sp~~~rv~~~L~~~gi~ye~~~v~~~-~~~~~~~~~nP~--g~vP~L~~~g~~l~ES~aI~   87 (247)
T 2r4v_A           11 DPEIELFVKAGSDGESIGNCPFCQRLFMILWLKGVKFNVTTVDMT-RKPEELKDLAPG--TNPPFLVYNKELKTDFIKIE   87 (247)
T ss_dssp             CCCEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEECCC-----------CC--SSSCEEEETTEEECCHHHHH
T ss_pred             CCCEEEEEecCcccccCCCChhHHHHHHHHHHcCCCcEEEEcCcc-cchHHHHHhCCC--CCCCEEEECCEeccCHHHHH
Confidence            3469999432110  113579999999999999999998888754 233456666544  68999999999998887777


Q ss_pred             HHH
Q 048504          206 SMY  208 (277)
Q Consensus       206 ~L~  208 (277)
                      +..
T Consensus        88 ~YL   90 (247)
T 2r4v_A           88 EFL   90 (247)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            643

>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A

Probab=97.01  E-value=0.0021  Score=48.54  Aligned_cols=73  Identities=21%  Similarity=0.303  Sum_probs=50.9

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe---
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG---  199 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG---  199 (277)
                      -||.|+++||      ++|+.+...|+.+     ++.|..+|++.++    ++.+.+|-  ..+|.+++  +|+.++   
T Consensus        22 ~vv~f~a~wC------~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~----~l~~~~~v--~~~Pt~~~~~~G~~v~~~~   89 (110)
T 2l6c_A           22 AIVFFHKNLC------PHCKNMEKVLDKFGARAPQVAISSVDSEARP----ELMKELGF--ERVPTLVFIRDGKVAKVFS   89 (110)
T ss_dssp             EEEEEECSSC------STHHHHHHHHHHHHTTCTTSCEEEEEGGGCH----HHHHHTTC--CSSCEEEEEESSSEEEEEE
T ss_pred             EEEEEECCCC------HhHHHHHHHHHHHHHHCCCcEEEEEcCcCCH----HHHHHcCC--cccCEEEEEECCEEEEEEc
Confidence            3666777765      7999999888763     5778899997765    45555664  78999987  998876   


Q ss_pred             chhHHHHHHhhccHHHHhcCC
Q 048504          200 NADVLKSMYETGELARVLDGF  220 (277)
Q Consensus       200 G~del~~L~EsGeL~klL~~~  220 (277)
                      |+-+..      +|.++|+..
T Consensus        90 G~~~~~------~l~~~~~~~  104 (110)
T 2l6c_A           90 GIMNPR------ELQALYASI  104 (110)
T ss_dssp             SCCCHH------HHHHHHHTC
T ss_pred             CCCCHH------HHHHHHHHH
Confidence            643322      355666543

>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A

Probab=97.01  E-value=0.0012  Score=63.90  Aligned_cols=80  Identities=19%  Similarity=0.199  Sum_probs=58.3

Q ss_pred             cccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCC
Q 048504          121 SIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRG  195 (277)
Q Consensus       121 ~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G  195 (277)
                      .+........|++|+++||      ++|..+..+|+.+     +|.+..+|++..+    ++.+.+|-  .++|++||||
T Consensus       111 ~i~~~~~~~~i~~f~a~~C------~~C~~~~~~l~~~a~~~~~v~~~~vd~~~~~----~~~~~~~i--~svPt~~i~g  178 (521)
T 1hyu_A          111 QIRDIDGDFEFETYYSLSC------HNCPDVVQALNLMAVLNPRIKHTAIDGGTFQ----NEITERNV--MGVPAVFVNG  178 (521)
T ss_dssp             HHHHCCSCEEEEEEECTTC------SSHHHHHHHHHHHHHHCTTEEEEEEETTTCH----HHHHHTTC--CSSSEEEETT
T ss_pred             HHHhcCCCcceEEEECCCC------cCcHHHHHHHHHHHhHcCceEEEEEechhhH----HHHHHhCC--CccCEEEECC
Confidence            3443344557999999986      6999998888652     5788889988664    45666665  7999999999


Q ss_pred             EEEech----hHHHHHHhhcc
Q 048504          196 KHVGNA----DVLKSMYETGE  212 (277)
Q Consensus       196 ~~IGG~----del~~L~EsGe  212 (277)
                      +.++.-    +++.++.+.+.
T Consensus       179 ~~~~~G~~~~~~l~~~l~~~~  199 (521)
T 1hyu_A          179 KEFGQGRMTLTEIVAKVDTGA  199 (521)
T ss_dssp             EEEEESCCCHHHHHHHHCCSS
T ss_pred             EEEecCCCCHHHHHHHHhhcc
Confidence            988643    56666665553

>1e6b_A Glutathione S-transferase; 1.65A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5

Probab=97.00  E-value=0.0026  Score=53.31  Aligned_cols=73  Identities=10%  Similarity=0.036  Sum_probs=56.7

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHH
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLK  205 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~  205 (277)
                      +.+++||+...      +++|.+|+.+|+.+||+|+.+.|+...  ....++.+....  .++|.+..||..|.+...+.
T Consensus         6 ~~~~~Ly~~~~------s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~~~g~~l~eS~aI~   77 (221)
T 1e6b_A            6 EEKLKLYSYWR------SSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKINPM--GTVPALVDGDVVINDSFAII   77 (221)
T ss_dssp             --CCEEEECTT------CHHHHHHHHHHHHTTCCCEEEECCTTTTGGGCHHHHHHCTT--CCSSEEEETTEEEESHHHHH
T ss_pred             CCCeEEEecCC------CCchHHHHHHHHHcCCCCEEEEecCCcccccCHHHHhhCCC--CCCCEEEECCEEEeeHHHHH
Confidence            34689999875      489999999999999999998887532  234566666644  68999999999999888877


Q ss_pred             HHH
Q 048504          206 SMY  208 (277)
Q Consensus       206 ~L~  208 (277)
                      +..
T Consensus        78 ~yL   80 (221)
T 1e6b_A           78 MYL   80 (221)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            643

>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase superfamily, CLIC4, NCC27, chloride ION channel, metal transport; 1.80A {Homo sapiens} PDB: 2d2z_A

Probab=97.00  E-value=0.0013  Score=58.26  Aligned_cols=81  Identities=12%  Similarity=0.079  Sum_probs=57.6

Q ss_pred             CCCCCcEEEEEecCCC--CCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechh
Q 048504          125 PGTEDRIVVYLTSLRG--IRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNAD  202 (277)
Q Consensus       125 ~~~~~kVVLYttSlcg--iR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~d  202 (277)
                      +..+..|+||.+....  ....||+|.+|+.+|+.+||+|+.+.|+.. ...+++.++...  .+||.|..||..|....
T Consensus        13 ~~~~~~i~ly~~~~~~~~~~~~~p~~~rv~~~L~~~gi~ye~~~v~~~-~~~~~~~~~nP~--gkVPvL~~~g~~l~ES~   89 (267)
T 2ahe_A           13 EDKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLK-RKPADLQNLAPG--THPPFITFNSEVKTDVN   89 (267)
T ss_dssp             ---CCCEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEECTT-SCCHHHHHHSTT--CCSCEEEETTEEECCHH
T ss_pred             cccCCCEEEEEecCCCccCCCCCchHHHHHHHHHHcCCCCEEEEeCcc-cChHHHHHhCCC--CCCCEEEECCEEecCHH
Confidence            3446679999543210  124689999999999999999998887653 122456666544  68999999999998887


Q ss_pred             HHHHHH
Q 048504          203 VLKSMY  208 (277)
Q Consensus       203 el~~L~  208 (277)
                      .+.+..
T Consensus        90 aI~~YL   95 (267)
T 2ahe_A           90 KIEEFL   95 (267)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            777654

>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}

Probab=97.00  E-value=0.0033  Score=55.11  Aligned_cols=58  Identities=12%  Similarity=0.153  Sum_probs=45.2

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHh----------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEE
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRG----------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKH  197 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~----------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~  197 (277)
                      ...|++|+++||      ++|.++..+|+.          .+|.+..+|++.+++    +.+..|-  .++|++||+|+.
T Consensus       139 ~~~vv~F~a~wC------~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~----~~~~~~V--~~vPt~~i~G~~  206 (243)
T 2hls_A          139 RVHIETIITPSC------PYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPD----IADKYGV--MSVPSIAINGYL  206 (243)
T ss_dssp             CEEEEEEECSSC------SSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHH----HHHHTTC--CSSSEEEETTEE
T ss_pred             CcEEEEEECCCC------CCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHH----HHHHcCC--eeeCeEEECCEE
Confidence            334677999886      699999998875          468899999998764    4445554  799999999984

>3qav_A RHO-class glutathione S-transferase; cytosol; 2.10A {Laternula elliptica} PDB: 3qaw_A*

Probab=96.94  E-value=0.0032  Score=53.97  Aligned_cols=74  Identities=16%  Similarity=0.178  Sum_probs=57.3

Q ss_pred             CCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEeCCEEEechhH
Q 048504          126 GTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADV  203 (277)
Q Consensus       126 ~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI~G~~IGG~de  203 (277)
                      ..+.+++||....      +++|.+|+.+|+.+||+|+.+.|+..  .....++.++...  .++|.+..||..|.....
T Consensus        22 s~~~~~~Ly~~~~------sp~~~rv~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~nP~--g~vPvL~~~g~~l~eS~a   93 (243)
T 3qav_A           22 ATTSKPFVYWGSG------SPPCWKVLLVLQEKKIDYDEKIISFSKKEHKSEEILELNPR--GQVPTFTDGDVVVNESTA   93 (243)
T ss_dssp             ---CCCEEEECTT------CHHHHHHHHHHHHTTCCCEEEECCTTTTGGGSHHHHHHCTT--CCSCEEEETTEEECSHHH
T ss_pred             cccCccEEEeCCC------CcchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCC--CCCCEEEECCEEEecHHH
Confidence            3456799999875      48999999999999999998888653  2334667777654  689999999999888777


Q ss_pred             HHHH
Q 048504          204 LKSM  207 (277)
Q Consensus       204 l~~L  207 (277)
                      +.+.
T Consensus        94 I~~Y   97 (243)
T 3qav_A           94 ICMY   97 (243)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7664

>3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A {Bombyx mori}

Probab=96.93  E-value=0.003  Score=54.34  Aligned_cols=71  Identities=10%  Similarity=0.105  Sum_probs=57.1

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe-CCE---EEechhH
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI-RGK---HVGNADV  203 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI-~G~---~IGG~de  203 (277)
                      .++++||+...|      ++|.+|+.+|+.+||+|+.+.|+... ..+++.++...  .++|.|.+ ||.   .|.....
T Consensus        24 ~~~~~Ly~~~~s------p~~~~v~~~L~~~gi~ye~~~v~~~~-~~~~~~~~nP~--g~vP~L~~~~g~~~~~l~eS~a   94 (246)
T 3rbt_A           24 TDKLRLYHVDMN------PYGHRVLLVLEAKRIKYEVYRLDPLR-LPEWFRAKNPR--LKIPVLEIPTDQGDRFLFESVV   94 (246)
T ss_dssp             CSSEEEEECTTC------HHHHHHHHHHHHTTBCEEEEECCSSS-CCHHHHHHCTT--CBSCEEEECCTTSCEEECCHHH
T ss_pred             CCceEEEecCCC------ccHHHHHHHHHHcCCCceEEEeCccc-CCHHHHHhCCC--CCCCEEEecCCCCceeeeCHHH
Confidence            678999999764      89999999999999999998887642 33456777654  68999999 888   8887777


Q ss_pred             HHHH
Q 048504          204 LKSM  207 (277)
Q Consensus       204 l~~L  207 (277)
                      +.+.
T Consensus        95 I~~y   98 (246)
T 3rbt_A           95 ICDY   98 (246)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6654

>1axd_A Glutathione S-transferase I; transferase, herbicide detoxification, transferase-transfera inhibitor complex; HET: GGL CYW; 2.50A {Zea mays} SCOP: a.45.1.1 c.47.1.5 PDB: 1bye_A*

Probab=96.92  E-value=0.0016  Score=53.62  Aligned_cols=71  Identities=4%  Similarity=-0.144  Sum_probs=55.4

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +++||+...      +++|.+|+.+|+.+||+|+.+.++...  ....++.+....  .++|.+..||..|.+...+.+.
T Consensus         2 ~~~Ly~~~~------sp~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~y   73 (209)
T 1axd_A            2 PMKLYGAVM------SWNLTRCATALEEAGSDYEIVPINFATAEHKSPEHLVRNPF--GQVPALQDGDLYLFESRAICKY   73 (209)
T ss_dssp             CEEEESCTT------CTTHHHHHHHHHHHTCCEEEECCCTTTTGGGSHHHHTTCTT--CCSCEEEETTEEEESHHHHHHH
T ss_pred             ceEEEeCCC------CchHHHHHHHHHhcCCCCEEEeccccccCcCChHHHHhCcC--CCCCeEEECCEEEecHHHHHHH
Confidence            478998875      479999999999999999998887542  233455555433  6899999999999998887774


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        74 L   74 (209)
T 1axd_A           74 A   74 (209)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3lyp_A Stringent starvation protein A; structural genomics, GST-superfamily, SSPA, stringent starva protein A homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB: 3mdk_A

Probab=96.92  E-value=0.0017  Score=54.35  Aligned_cols=70  Identities=17%  Similarity=0.093  Sum_probs=54.4

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      +++||+...      +++|.+|+.+|+..||+|+.+.|+.. ...+++.++...  .++|.+..||..|.+...+.+..
T Consensus         8 ~~~Ly~~~~------s~~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~yL   77 (215)
T 3lyp_A            8 RLACYSDPA------DHYSHRVRIVLAEKGVSAEIISVEAG-RQPPKLIEVNPY--GSLPTLVDRDLALWESTVVMEYL   77 (215)
T ss_dssp             CCEEEECTT------CHHHHHHHHHHHHHTCCCEEEECC----CCHHHHHHCTT--CCSSEEECC-CEEESHHHHHHHH
T ss_pred             CeEEEeCCC------CchHHHHHHHHHHCCCCcEEEecCcc-cccHHHHHHCCC--CCcCeEEECCEEeecHHHHHHHH
Confidence            789999875      48999999999999999999988754 234566777654  68999999999988887776643

>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1; glutathione-S-tranferase superfamily, chloride ION channel, metal transport; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A 3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A

Probab=96.87  E-value=0.0034  Score=54.26  Aligned_cols=78  Identities=9%  Similarity=0.072  Sum_probs=57.6

Q ss_pred             CCcEEEEEecCC--CCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHH
Q 048504          128 EDRIVVYLTSLR--GIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLK  205 (277)
Q Consensus       128 ~~kVVLYttSlc--giR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~  205 (277)
                      +..+.||.....  ..-.+||+|++|+.+|..+||+|+.+.|+.. ...+++.++...  .+||.+..||..|.....+.
T Consensus         5 ~~~~~Ly~~~~~~g~~~~~sp~~~rv~~~L~~~gi~ye~~~v~~~-~~~~~~~~~nP~--g~VPvL~~~g~~l~eS~aI~   81 (241)
T 1k0m_A            5 QPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTK-RRTETVQKLCPG--GELPFLLYGTEVHTDTNKIE   81 (241)
T ss_dssp             -CCEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEECTT-SCCHHHHHHCTT--CCSSEEEETTEEEECHHHHH
T ss_pred             CCceEEEeecCCCCCCCCCCHHHHHHHHHHHHcCCccEEEEcCCc-ccHHHHHHhCCC--CCCCEEEECCEEecCHHHHH
Confidence            446899998732  1124789999999999999999988877643 233456666543  68999999999888877776


Q ss_pred             HHH
Q 048504          206 SMY  208 (277)
Q Consensus       206 ~L~  208 (277)
                      +..
T Consensus        82 ~yL   84 (241)
T 1k0m_A           82 EFL   84 (241)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            643

>4hi7_A GI20122; GST, glutathione S-transferase, enzyme function initiative, structural genomics, unknown function; HET: GSH; 1.25A {Drosophila mojavensis}

Probab=96.87  E-value=0.0028  Score=53.58  Aligned_cols=70  Identities=11%  Similarity=0.119  Sum_probs=55.1

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCC--CHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSM--DSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~--d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +.|||....      +|+|++|+.+|+.+||+|+.+.|+.  ......++.++...  .+||.+..||..|.....+.+.
T Consensus         3 kpiLY~~~~------Sp~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~d~~~~l~eS~aI~~Y   74 (228)
T 4hi7_A            3 KPILYGIDA------SPPVRAVKLTLAALQLPYDYKIVNLMNKEQHSEEYLKKNPQ--HTVPLLEDGDANIADSHAIMAY   74 (228)
T ss_dssp             CCEEEECTT------CHHHHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHHHCTT--CCSCEEEETTEEEESHHHHHHH
T ss_pred             ceEEEECCC------ChHHHHHHHHHHHhCCCCEEEEecCCCcccCCHHHHHhCCC--CceeeEEECCEEEechHHHHHH
Confidence            568999875      4899999999999999998877654  33344667777543  6899999999999888777764

>2v6k_A Maleylpyruvate isomerase; glutathione-S-transferase, GST, plasmid, bacterial, biodegradation, fumaryl pyruvate; HET: TGG; 1.3A {Ralstonia SP} PDB: 2jl4_A*

Probab=96.87  E-value=0.0027  Score=52.68  Aligned_cols=71  Identities=8%  Similarity=0.014  Sum_probs=55.4

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +++||+...      +++|.+|+.+|+.+||+|+.+.|+...  ....++.++...  .++|.+..||..|.+...+.+.
T Consensus         2 ~~~Ly~~~~------s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~y   73 (214)
T 2v6k_A            2 KMKLYNFWR------SGTSHRLRIALNLKGVPYEYLAVHLGKEEHLKDAFKALNPQ--QLVPALDTGAQVLIQSPAIIEW   73 (214)
T ss_dssp             CCEEEECSS------CHHHHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHHHCTT--CCSCEEECSSCEEECHHHHHHH
T ss_pred             eeEEEecCC------CCcHHHHHHHHHHCCCCceEEecCCCcccccCHHHHhcCCC--CcCCEEEECCEEEecHHHHHHH
Confidence            578998875      489999999999999999998887542  234566676644  6899998888888888777764


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        74 L   74 (214)
T 2v6k_A           74 L   74 (214)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2a2r_A Glutathione S-transferase P; detoxification, nitric oxide carrier, S- nitrosoglutathione; HET: MES GSN; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 11gs_A* 12gs_A* 14gs_A* 16gs_A* 18gs_A* 21gs_A* 13gs_A* 2a2s_A* 3dd3_A* 3dgq_A* 3n9j_A* 3pgt_A* 1pgt_A* 2pgt_A* 4pgt_A* 22gs_A* 17gs_A* 3gus_A* 10gs_A* 1aqv_A* ...

Probab=96.86  E-value=0.0044  Score=51.58  Aligned_cols=72  Identities=14%  Similarity=0.075  Sum_probs=55.8

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      .+++||+...      +++|.+|+.+|+..||+|+.+.|+.......++++....  .++|.+..||..|.....+.+..
T Consensus         2 ~~~~Ly~~~~------s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~yL   73 (210)
T 2a2r_A            2 PPYTVVYFPV------RGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLY--GQLPKFQDGDLTLYQSNTILRHL   73 (210)
T ss_dssp             CSEEEEECSS------SGGGHHHHHHHHHTTCCEEEEECCHHHHHHSHHHHHSTT--SCSCEEEETTEEEECHHHHHHHH
T ss_pred             CceEEEEeCC------cchHHHHHHHHHHcCCCceEEEecHHhhchhhccCCCCC--CCCCEEEECCEEEeeHHHHHHHH
Confidence            3588999875      479999999999999999999987532222456666543  68999999999998887777643

>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}

Probab=96.86  E-value=0.0025  Score=53.24  Aligned_cols=68  Identities=10%  Similarity=0.142  Sum_probs=52.9

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      ++||+..      +||+|++|+.+|+.+||+|+.+.|+... -.+++.++...  .++|.+..||..|.....+.+.
T Consensus         4 m~LY~~~------~sP~~~rvr~~L~e~gi~~e~~~v~~~~-~~~~~~~~nP~--g~vPvL~~~~~~l~ES~aI~~y   71 (210)
T 4hoj_A            4 MTLYSGI------TCPFSHRCRFVLYEKGMDFEIKDIDIYN-KPEDLAVMNPY--NQVPVLVERDLVLHESNIINEY   71 (210)
T ss_dssp             CEEEECT------TCHHHHHHHHHHHHHTCCCEEEECCTTS-CCHHHHHHCTT--CCSCEEEETTEEEESHHHHHHH
T ss_pred             EEEecCC------CChHHHHHHHHHHHcCCCCEEEEeCCCC-CCHHHHHHCCC--CCCcEEEECCEEEeccHHHHHH
Confidence            6789886      4699999999999999999988876431 12456666644  6899999999988877766654

>1zl9_A GST class-sigma, glutathione S-transferase 5; glutathione transferase, C.elegans; HET: GSH; 2.01A {Caenorhabditis elegans}

Probab=96.85  E-value=0.0048  Score=51.12  Aligned_cols=72  Identities=14%  Similarity=0.088  Sum_probs=56.6

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      ..++||+...+      ++|.+|+.+|+..||+|+.+.|+.+  ...++++..|....++|.+..||..|.+...+.+..
T Consensus         2 ~~~~Ly~~~~s------~~~~~v~~~L~~~gi~~e~~~v~~~--~~~~~~~~~~~P~g~vP~L~~~g~~l~eS~aI~~yL   73 (207)
T 1zl9_A            2 VSYKLTYFNGR------GAGEVSRQIFAYAGQQYEDNRVTQE--QWPALKETCAAPFGQLPFLEVDGKKLAQSHAIARFL   73 (207)
T ss_dssp             CCEEEEEESSS------GGGHHHHHHHHHHTCCCEEEEECTT--THHHHHHTTCSTTSCSCEEEETTEEEECHHHHHHHH
T ss_pred             CceEEEEcCCC------chHHHHHHHHHHcCCCceEEEecHH--HHHHHhhccCCCCCCCCEEEECCEEEeeHHHHHHHH
Confidence            35889998754      7999999999999999999888753  236677763323368999999999999888877744

>3q18_A GSTO-2, glutathione S-transferase omega-2; glutathione transferase, dehydroascorbate reductase, reductase; 1.70A {Homo sapiens} PDB: 3q19_A* 3qag_A*

Probab=96.84  E-value=0.0018  Score=55.21  Aligned_cols=74  Identities=8%  Similarity=0.074  Sum_probs=56.6

Q ss_pred             CCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe-CCEEEechhH
Q 048504          125 PGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI-RGKHVGNADV  203 (277)
Q Consensus       125 ~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI-~G~~IGG~de  203 (277)
                      +...++++||+...      |++|.+|+.+|+.+||+|+.+.|+... ..+++.++...  .++|.+.+ ||..|.....
T Consensus        18 ~~~~~~~~Ly~~~~------sp~~~~v~~~L~~~gi~~e~~~v~~~~-~~~~~~~~nP~--g~vP~L~~~~g~~l~eS~a   88 (239)
T 3q18_A           18 PVPEGLIRIYSMRF------CPYSHRTRLVLKAKDIRHEVVNINLRN-KPEWYYTKHPF--GHIPVLETSQSQLIYESVI   88 (239)
T ss_dssp             CCCTTCEEEEECTT------CHHHHHHHHHHHHTTCCEEEEEBCSSS-CCGGGGGTSTT--CCSCEEECTTCCEECSHHH
T ss_pred             CCCCCeEEEEeCCC------ChHHHHHHHHHHHcCCCcEEEecCccc-CCHHHHhcCCC--CCCCEEEeCCCceeecHHH
Confidence            34567899999876      489999999999999999998887542 22334444433  68999999 8988888777


Q ss_pred             HHHH
Q 048504          204 LKSM  207 (277)
Q Consensus       204 l~~L  207 (277)
                      +.+.
T Consensus        89 I~~y   92 (239)
T 3q18_A           89 ACEY   92 (239)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7664

>1yy7_A SSPA, stringent starvation protein A; GST fold, transcription; HET: CIT; 2.02A {Yersinia pestis}

Probab=96.83  E-value=0.0036  Score=52.33  Aligned_cols=71  Identities=14%  Similarity=0.101  Sum_probs=56.1

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      ..++||+...      |++|.+|+.+|+..||+|+.+.|+.+ ....++.++...  .++|.+..||..|.+...+.+..
T Consensus         9 ~~~~Ly~~~~------s~~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~yL   79 (213)
T 1yy7_A            9 SVMTLFSGPT------DIFSHQVRIVLAEKGVSVEIEQVEAD-NLPQDLIDLNPY--RTVPTLVDRELTLYESRIIMEYL   79 (213)
T ss_dssp             SSEEEEECTT------CHHHHHHHHHHHHHTCCEEEEECCTT-SCCHHHHHHCTT--CCSSEEEETTEEEESHHHHHHHH
T ss_pred             CceEEEcCCC------ChhHHHHHHHHHHcCCCCeEEeCCcc-cCcHHHHHHCCC--CCCCEEEECCEEEecHHHHHHHH
Confidence            3589999875      48999999999999999999988753 223456666644  68999999999998887777643

>3bby_A Uncharacterized GST-like protein YFCF; NP_416804.1, glutathione S-transferase, N-terminal domain, S genomics; 1.85A {Escherichia coli}

Probab=96.82  E-value=0.0034  Score=52.36  Aligned_cols=73  Identities=8%  Similarity=0.047  Sum_probs=47.9

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      .+++||+...    ..+++|.+|+.+|+..||+|+.+.|+...  ....++.++...  .++|.+..||..|.....+.+
T Consensus         5 ~~~~Ly~~~~----~~s~~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~~~g~~l~eS~aI~~   78 (215)
T 3bby_A            5 PAITLWSDAH----FFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPTWQGYGQT--RRVPLLQIDDFELSESSAIAE   78 (215)
T ss_dssp             CCEEEEEETT----SCCHHHHHHHHHHHHHTCCCEEEEEC--------------------CCCEEEETTEEEESHHHHHH
T ss_pred             CCEEEEecCC----CCCcHHHHHHHHHHHcCCCCEEEEecCccccccCHHHHhhCCC--CCCCEEEeCCeEeecHHHHHH
Confidence            4689999861    13589999999999999999988876532  233456666543  589999999999988877776


Q ss_pred             H
Q 048504          207 M  207 (277)
Q Consensus       207 L  207 (277)
                      .
T Consensus        79 y   79 (215)
T 3bby_A           79 Y   79 (215)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1gnw_A Glutathione S-transferase; herbicide detoxification; HET: GTX; 2.20A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5 PDB: 1bx9_A*

Probab=96.78  E-value=0.0018  Score=53.41  Aligned_cols=71  Identities=8%  Similarity=-0.064  Sum_probs=53.8

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +++||+...      +++|.+|+.+|+.+||+|+.+.|+...  ....++.++...  .++|.+..||..|.+...+.+.
T Consensus         2 ~~~Ly~~~~------sp~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~y   73 (211)
T 1gnw_A            2 GIKVFGHPA------SIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPF--GQVPAFEDGDLKLFESRAITQY   73 (211)
T ss_dssp             CEEEEECTT------CHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSTTGGGTCTT--CCSCEEEETTEEEECHHHHHHH
T ss_pred             eeEEEeCCC------CcchHHHHHHHHhcCCCcEEEEeccccccccCHHHHHhCCC--CCCCEEEECCEEEeCHHHHHHH
Confidence            578999875      489999999999999999988887432  122344444433  6899999999999888777764


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        74 L   74 (211)
T 1gnw_A           74 I   74 (211)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}

Probab=96.78  E-value=0.0037  Score=52.39  Aligned_cols=70  Identities=14%  Similarity=0.172  Sum_probs=56.2

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      .++||+...      +++|.+|+.+|+..||+|+.+.|+.. ...+++.++...  .++|.+..||..|.+...+.+..
T Consensus         6 ~~~Ly~~~~------sp~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~yL   75 (216)
T 3lyk_A            6 VMTLFSNKD------DIYCHQVKIVLAEKGVLYENAEVDLQ-ALPEDLMELNPY--GTVPTLVDRDLVLFNSRIIMEYL   75 (216)
T ss_dssp             CEEEEECTT------CHHHHHHHHHHHHHTCCCEEEECCTT-SCCHHHHHHCTT--CCSCEEEETTEEEESHHHHHHHH
T ss_pred             eEEEEeCCC------ChhHHHHHHHHHHcCCCcEEEeCCcc-cCcHHHHhhCCC--CCcCeEEECCeEecCHHHHHHHH
Confidence            488999875      48999999999999999999888754 233566666654  68999999999998887777643

>1aw9_A Glutathione S-transferase III; herbicide detoxification; 2.20A {Zea mays} SCOP: a.45.1.1 c.47.1.5

Probab=96.78  E-value=0.0011  Score=55.21  Aligned_cols=71  Identities=7%  Similarity=0.044  Sum_probs=53.6

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +++||+...      +++|.+|+.+|+.+||+|+.+.++...  ....++.++...  .++|.+..||..|.+...+.+.
T Consensus         2 ~~~Ly~~~~------sp~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~y   73 (216)
T 1aw9_A            2 PLKLYGMPL------SPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPF--GQIPALVDGDEVLFESRAINRY   73 (216)
T ss_dssp             CEEEESCTT------CHHHHHHHHHHHHTTCCEEEECCCSSTTSSCCCSGGGTCTT--CCSCEEEETTEEEESHHHHHHH
T ss_pred             ceEEEecCC------CccHHHHHHHHHHcCCccEEEecCccccccCCHHHHHhCCC--CCcCEEEECCEEeeCHHHHHHH
Confidence            578998875      489999999999999999998886432  111233444433  6899999999999988887764


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        74 L   74 (216)
T 1aw9_A           74 I   74 (216)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1pn9_A GST class-delta, glutathione S-transferase 1-6; protein inhibitor complex; HET: GTX; 2.00A {Anopheles gambiae} SCOP: a.45.1.1 c.47.1.5

Probab=96.77  E-value=0.0049  Score=51.25  Aligned_cols=70  Identities=14%  Similarity=0.122  Sum_probs=54.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      ++||+...      +++|.+|+.+|+.+||+|+.+.|+..  .....++.++...  .++|.+..||..|.+...+.+..
T Consensus         1 ~~Ly~~~~------sp~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~yL   72 (209)
T 1pn9_A            1 MDFYYLPG------SAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKLNPQ--HCIPTLVDNGFALWESRAIQIYL   72 (209)
T ss_dssp             CEEEECTT------CHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHHCTT--CCSSEEEETTEEEESHHHHHHHH
T ss_pred             CeEEeCCC------CccHHHHHHHHHHcCCCcEEEEecccCCCcCCHHHHhhCCC--CCCCEEEECCEEEEeHHHHHHHH
Confidence            36888775      58999999999999999998888642  2233566677644  68999999999999888777643

>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A

Probab=96.77  E-value=0.014  Score=41.97  Aligned_cols=57  Identities=18%  Similarity=0.395  Sum_probs=41.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C-CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F-RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~-gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      |+.|++++      |++|+.+...|+.    + ++.+..+|++.+++    +.+.++-  ..+|.+++  +|+.+.
T Consensus        20 ~v~f~~~~------C~~C~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~v--~~~Pt~~~~~~g~~~~   83 (104)
T 2e0q_A           20 VVDFWAEW------CAPCLILAPIIEELAEDYPQVGFGKLNSDENPD----IAARYGV--MSLPTVIFFKDGEPVD   83 (104)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHH----HHHHTTC--CSSCEEEEEETTEEEE
T ss_pred             EEEEECCC------ChhHHHHhHHHHHHHHHcCCceEEEEECCCCHH----HHHhCCc--cccCEEEEEECCeEhh
Confidence            44555554      6899988877765    2 58899999988754    4555654  68999988  888653

>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A

Probab=96.76  E-value=0.0033  Score=48.10  Aligned_cols=56  Identities=11%  Similarity=0.230  Sum_probs=41.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+++|      |+.|+++...|+..     +|.|..+|++.+++    +.+.++-  ..+|.+++  +|+.+
T Consensus        34 vv~F~a~w------C~~C~~~~p~l~~~~~~~~~v~~~~vd~~~~~~----l~~~~~v--~~~Pt~~~~~~G~~~   96 (114)
T 2oe3_A           34 VIDFYATW------CGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPD----IAKECEV--TAMPTFVLGKDGQLI   96 (114)
T ss_dssp             EEEEECTT------CHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHH----HHHHTTC--CSBSEEEEEETTEEE
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH----HHHHCCC--CcccEEEEEeCCeEE
Confidence            55566665      58999888877764     59999999998764    4455654  68999876  88864

>1v2a_A Glutathione transferase GST1-6; glutathione S-transferase, detoxification, xenobiotics; HET: GTS; 2.15A {Anopheles dirus} SCOP: a.45.1.1 c.47.1.5

Probab=96.75  E-value=0.007  Score=50.20  Aligned_cols=70  Identities=10%  Similarity=0.174  Sum_probs=55.0

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC-HHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD-SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d-~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      +.||+...      +++|.+|+.+|+..||+|+.+.|+.. .+...++.++...  .++|.+..||..|.+...+.+..
T Consensus         1 ~~Ly~~~~------s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~nP~--g~vP~L~~~g~~l~eS~aI~~yL   71 (210)
T 1v2a_A            1 MDYYYSLI------SPPCQSAILLAKKLGITLNLKKTNVHDPVERDALTKLNPQ--HTIPTLVDNGHVVWESYAIVLYL   71 (210)
T ss_dssp             CEEEECTT------CHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCTT--CCSCEEEETTEEEESHHHHHHHH
T ss_pred             CeEEeCCC------CccHHHHHHHHHHcCCCcEEEECCcccchhhHHHHHhCCC--CCcCeEEECCEEEEcHHHHHHHH
Confidence            36888765      58999999999999999998888753 2233677777644  68999999999998888777643

>1okt_A Glutathione S-transferase; GST; 1.9A {Plasmodium falciparum} SCOP: a.45.1.1 c.47.1.5 PDB: 1pa3_A 1q4j_A* 3fr9_A* 3frc_A* 2aaw_A* 3fr6_A 3fr3_A*

Probab=96.73  E-value=0.0039  Score=51.95  Aligned_cols=72  Identities=15%  Similarity=0.191  Sum_probs=54.9

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHH-----HhCCCCCCCcEEEeCCEEEechhH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQC-----VFGGKNVTLPQVFIRGKHVGNADV  203 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke-----~lG~~~~tvPqVFI~G~~IGG~de  203 (277)
                      .+++||+...+      ++|.+|+.+|+..||+|+.+.|+...+...++.+     ....  .++|.+..||..|.....
T Consensus         3 ~~~~Ly~~~~s------~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~P~--g~vP~L~~~g~~l~eS~a   74 (211)
T 1okt_A            3 DNIVLYYFDAR------GKAELIRLIFAYLGIEYTDKRFGVNGDAFVEFKNFKKEKDTPF--EQVPILQIGDLILAQSQA   74 (211)
T ss_dssp             CCEEEEEESSS------TTTHHHHHHHHHHTCCCEEEEETSSSCHHHHHHHHHHHSCCSS--SCSCEEEETTEEEECHHH
T ss_pred             CccEEEEECCC------chhHHHHHHHHHcCCCceeeeccCCHHHHHHHhhccccccCCC--CCCCEEEECCEEeehHHH
Confidence            45899998764      7999999999999999998888532223355555     4433  689999999999988887


Q ss_pred             HHHHH
Q 048504          204 LKSMY  208 (277)
Q Consensus       204 l~~L~  208 (277)
                      +.+..
T Consensus        75 I~~yL   79 (211)
T 1okt_A           75 IVRYL   79 (211)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77643

>2cvd_A Glutathione-requiring prostaglandin D synthase; glutathione-S-transferase, isomerase; HET: GSH HQL; 1.45A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1iyi_A* 1v40_A* 1iyh_A* 3vi5_A* 3vi7_A* 2vcq_A* 2vcw_A* 2vcx_A* 2vcz_A* 2vd0_A* 2vd1_A* 3kxo_A* 3ee2_A* 1pd2_1*

Probab=96.71  E-value=0.0053  Score=50.46  Aligned_cols=70  Identities=9%  Similarity=0.104  Sum_probs=54.9

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHHh
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYE  209 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~E  209 (277)
                      ++.||+...      +++|.+|+.+|+..||+|+.+.++.+  ...++.++...  .++|.+..||..|.+...+.+..+
T Consensus         2 ~~~Ly~~~~------s~~~~~v~~~L~~~gi~~e~~~v~~~--~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~yL~   71 (198)
T 2cvd_A            2 NYKLTYFNM------RGRAEIIRYIFAYLDIQYEDHRIEQA--DWPEIKSTLPF--GKIPILEVDGLTLHQSLAIARYLT   71 (198)
T ss_dssp             CEEEEEESS------SGGGHHHHHHHHHTTCCCEEEEECGG--GHHHHHTTSTT--SCSCEEEETTEEEECHHHHHHHHH
T ss_pred             CcEEEEcCC------CchHHHHHHHHHHcCCCceEEEeCHH--HHHHhccCCCC--CCCCEEEECCEEEecHHHHHHHHH
Confidence            478998875      47999999999999999998888752  24555555433  689999999999988888777543

>2on7_A Nagst-1, Na glutathione S-transferase 1; hookworm; 2.40A {Necator americanus}

Probab=96.70  E-value=0.0048  Score=50.81  Aligned_cols=70  Identities=10%  Similarity=0.032  Sum_probs=55.2

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      .+++||+...+      ++|.+|+.+|+..||+|+.+.|+.  +...++.+....  .++|.+..||..|.+...+.+..
T Consensus         2 ~~~~Ly~~~~s------~~~~~vr~~L~~~gi~~e~~~v~~--~~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~yL   71 (206)
T 2on7_A            2 VHYKLTYFAIR------GAGECARQIFALADQEFEDVRLDK--EQFAKVKPDLPF--GQVPVLEVDGKQLAQSLAICRYL   71 (206)
T ss_dssp             CCEEEEEESSS------TTTHHHHHHHHHHTCCCEEEEECH--HHHHHHGGGSSS--SCSCEEEETTEEEECHHHHHHHH
T ss_pred             CceEEEEcCCC------cchHHHHHHHHHcCCCeeEEEecH--HHHHHhCcCCCC--CCCCEEEECCEEEeeHHHHHHHH
Confidence            35889998754      799999999999999999988874  223455555543  68999999999999888877744

>1tw9_A Glutathione S-transferase 2; 1.71A {Heligmosomoides polygyrus} SCOP: a.45.1.1 c.47.1.5

Probab=96.69  E-value=0.0046  Score=50.93  Aligned_cols=70  Identities=10%  Similarity=0.062  Sum_probs=54.7

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      .+++||+...+      ++|.+|+.+|+..||+|+.+.|+.  +...++.++...  .++|.+..||..|.+...+.+..
T Consensus         2 ~~~~Ly~~~~s------~~~~~v~~~L~~~gi~ye~~~v~~--~~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~yL   71 (206)
T 1tw9_A            2 VHYKLTYFNGR------GAGECARQVFALADQKYEDVRLTQ--ETFVPLKATFPF--GQVPVLEVDGQQLAQSQAICRYL   71 (206)
T ss_dssp             CCEEEEEESSS------GGGHHHHHHHHHTTCCCEEEEECH--HHHGGGGGGSTT--SCSCEEEETTEEEECHHHHHHHH
T ss_pred             CceEEEEcCCC------ccHHHHHHHHHHcCCCceEEEeCH--HHHHHHcccCCC--CCCCEEEECCEEEecHHHHHHHH
Confidence            35889998754      799999999999999999988873  222444455433  68999999999999988877744

>2on5_A Nagst-2, Na glutathione S-transferase 2; hookworm; HET: GSH; 1.90A {Necator americanus}

Probab=96.68  E-value=0.0029  Score=52.11  Aligned_cols=71  Identities=10%  Similarity=-0.011  Sum_probs=55.1

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      .+++||+...+      ++|.+|+.+|+.+||+|+.+.|+.+.  ..++++....  .++|.+..||..|.+...+.+..
T Consensus         2 ~~~~Ly~~~~s------~~~~~vr~~L~~~gi~ye~~~v~~~~--~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~yL   71 (206)
T 2on5_A            2 VHYKLTYFAGR------GLAEPIRQIFALAGQKYEDVRYTFQE--WPKHKDEMPF--GQIPVLEEDGKQLAQSFAIARYL   71 (206)
T ss_dssp             CCEEEEEESSS------GGGHHHHHHHHHHTCCCEEEEECTTT--GGGGGGGSTT--SCSCEEEETTEEEESHHHHHHHH
T ss_pred             CceEEEecCCC------cchHHHHHHHHHcCCCceEEEecHHH--HHHhccCCCC--CCCCEEEECCEEEecHHHHHHHH
Confidence            35889998754      79999999999999999988887532  2445555433  68999999999999888877744


Q ss_pred             h
Q 048504          209 E  209 (277)
Q Consensus       209 E  209 (277)
                      +
T Consensus        72 ~   72 (206)
T 2on5_A           72 S   72 (206)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1yq1_A Glutathione S-transferase; nematoda, structural genomics, PSI, protein structure initiative; 3.00A {Caenorhabditis elegans}

Probab=96.68  E-value=0.0028  Score=52.27  Aligned_cols=71  Identities=14%  Similarity=0.081  Sum_probs=54.5

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      .+++||+...+      ++|.+|+.+|+.+||+|+.+.|+.. ....++.+....  .++|.+..||..|.+...+.+..
T Consensus         2 ~~~~Ly~~~~s------~~~~~vr~~L~~~gi~~e~~~v~~~-~~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~yL   72 (208)
T 1yq1_A            2 PSYKLTYFFFR------GLGEPIRLLFHLAGVQFEEVRMNPD-QTWLDIKDSTPM--KQLPVLNIDGFELPQSGAILRYL   72 (208)
T ss_dssp             CCEEEEEESSS------TTTHHHHHHHHHHTCCCEEEEECTT-TCCHHHHHTSTT--SCSCEEEESSCEECCHHHHHHHH
T ss_pred             CceEEEEeCCC------CchHHHHHHHHHcCCCeEEEEeccc-chhhhhhccCCC--CCCCEEEECCEEEeeHHHHHHHH
Confidence            35889998764      7999999999999999998887631 112455555543  68999999999998888777644

>1k0d_A URE2 protein; nitrate assimilation, structural genomics, gene regulation; HET: GSH; 2.20A {Saccharomyces cerevisiae} SCOP: a.45.1.1 c.47.1.5 PDB: 1jzr_A* 1k0b_A* 1k0c_A* 1k0a_A* 1g6w_A 1g6y_A 1hqo_A

Probab=96.68  E-value=0.0069  Score=52.50  Aligned_cols=72  Identities=6%  Similarity=0.069  Sum_probs=55.5

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEe---CCEEEechh
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFI---RGKHVGNAD  202 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI---~G~~IGG~d  202 (277)
                      +..++||+...      |++|.+|+.+|+.+||+|+.+.|+...  ....++.++...  .+||.+..   ||..|....
T Consensus        17 m~~~~Ly~~~~------~p~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~~~~~~g~~l~ES~   88 (260)
T 1k0d_A           17 LEGYTLFSHRS------APNGFKVAIVLSELGFHYNTIFLDFNLGEHRAPEFVSVNPN--ARVPALIDHGMDNLSIWESG   88 (260)
T ss_dssp             SSSEEEEECTT------CHHHHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHHTTCTT--CCSCEEEEGGGTTEEEESHH
T ss_pred             CCcEEEEcCCC------CccHHHHHHHHHHCCCCceEEEecCccccccCHHHHhhCCC--CCcCEEEecCCCCeEEECHH
Confidence            45799999875      589999999999999999988776532  233556665543  68999988   788888877


Q ss_pred             HHHHH
Q 048504          203 VLKSM  207 (277)
Q Consensus       203 el~~L  207 (277)
                      .+.+.
T Consensus        89 aI~~Y   93 (260)
T 1k0d_A           89 AILLH   93 (260)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77664

>2ws2_A NU-class GST, glutathione S-transferase; parasite, nematode; 2.01A {Haemonchus contortus}

Probab=96.68  E-value=0.0037  Score=51.52  Aligned_cols=70  Identities=10%  Similarity=0.035  Sum_probs=54.9

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      .+++||+...+      ++|.+|+.+|+.+||+|+.+.|+.+.  ..++.++...  .++|.+..||..|.+...+.+..
T Consensus         2 ~~~~Ly~~~~s------~~~~~v~~~L~~~gi~~e~~~v~~~~--~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~yL   71 (204)
T 2ws2_A            2 VHYKLTYFNGR------GAAEIIRQVFVLAGQDYEDVRLTHEE--WPKHKASMPF--GQLPVLEVDGKQLPQSVAIVRYL   71 (204)
T ss_dssp             CCEEEEEESSS------GGGHHHHHHHHHTTCCCEEEEECTTT--GGGTGGGSTT--SCSCEEEETTEEEESHHHHHHHH
T ss_pred             CccEEEEeCCC------chHHHHHHHHHHcCCCceEEEecHhh--HHHhhhcCCC--CCCCEEEECCEEeecHHHHHHHH
Confidence            35789998754      79999999999999999988887531  2444555443  68999999999999988877744

>2imi_A Epsilon-class glutathione S-transferase; HET: GSH; 1.40A {Anopheles gambiae} PDB: 2il3_A* 2imk_A*

Probab=96.67  E-value=0.0042  Score=52.13  Aligned_cols=71  Identities=15%  Similarity=0.259  Sum_probs=55.1

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +++||+...      +++|.+|+.+|+..||+|+.+.++...  ....++.++...  .++|.+..||..|.+...+.+.
T Consensus         3 ~~~Ly~~~~------s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~~~g~~l~eS~aI~~y   74 (221)
T 2imi_A            3 NLVLYTLHL------SPPCRAVELTAKALGLELEQKTINLLTGDHLKPEFVKLNPQ--HTIPVLDDNGTIITESHAIMIY   74 (221)
T ss_dssp             CEEEEECTT------CHHHHHHHHHHHHHTCCEEEEECCGGGTGGGSHHHHTTCTT--CCSCEEEETTEEEESHHHHHHH
T ss_pred             ceEEeeCCC------CccHHHHHHHHHHcCCCceEEEccccccccCCHHHHhhCcC--CCCCEEEECCEEEeeHHHHHHH
Confidence            589999875      489999999999999999998887432  223455555543  6899999899999888877764


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        75 L   75 (221)
T 2imi_A           75 L   75 (221)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1oyj_A Glutathione S-transferase; herbicide detoxification; HET: GSH; 1.95A {Oryza sativa} SCOP: a.45.1.1 c.47.1.5

Probab=96.67  E-value=0.0061  Score=51.72  Aligned_cols=73  Identities=12%  Similarity=0.054  Sum_probs=55.5

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +.+++||+...      |++|.+|+.+|+.+||+|+.+.|+.. ....++.+.... ..++|.+..||..|.+...+.+.
T Consensus         4 ~~~~~Ly~~~~------sp~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~~~~nP~-~g~vP~L~~~g~~l~eS~aI~~y   75 (231)
T 1oyj_A            4 EKELVLLDFWV------SPFGQRCRIAMAEKGLEFEYREEDLG-NKSDLLLRSNPV-HRKIPVLLHAGRPVSESLVILQY   75 (231)
T ss_dssp             SCCEEEEECTT------CHHHHHHHHHHHHHTCCCEEEECCTT-SCCHHHHHHSTT-TCCSCEEEETTEEEESHHHHHHH
T ss_pred             CCceEEEeCCC------ChHHHHHHHHHHHCCCCCeEEecCcc-cCCHHHHhhCCC-CCCCCEEEECCEEEecHHHHHHH
Confidence            56799999875      58999999999999999998888653 122455555432 14799999999998888777664


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        76 L   76 (231)
T 1oyj_A           76 L   76 (231)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3lxz_A Glutathione S-transferase family protein; structural genomics, PP0183, PSI-2, protein structure initiative; 1.76A {Pseudomonas putida} PDB: 3pr8_A*

Probab=96.67  E-value=0.0041  Score=52.32  Aligned_cols=68  Identities=10%  Similarity=0.002  Sum_probs=53.9

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      ++||+...      +++|.+|+.+|+..||+|+.+.|..+  ...++.++...  .++|.|.++|..|.+...+.+..
T Consensus         3 ~~Ly~~~~------sp~~~~v~~~L~~~gi~ye~~~v~~~--~~~~~~~~~P~--g~vP~L~~~~~~l~eS~aI~~yL   70 (229)
T 3lxz_A            3 LKLYGFSV------SNYYNMVKLALLEKGLTFEEVTFYGG--QAPQALEVSPR--GKVPVLETEHGFLSETSVILDYI   70 (229)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHTTCCEEEEECCCC--SCHHHHTTSTT--SCSCEEEETTEEEESHHHHHHHH
T ss_pred             EEEEeCCC------CchHHHHHHHHHHcCCCCEEEecCCC--CCHHHHhhCCC--CCcCeEEeCCceeecHHHHHHHH
Confidence            78999875      48999999999999999999998543  23455555544  68999999998888877776643

>3n5o_A Glutathione transferase; seattle structural genomics center for infectious disease, S GST, pathogenic fungus, coccidioidomycosis; HET: GSH; 1.85A {Coccidioides immitis} PDB: 3lg6_A*

Probab=96.66  E-value=0.006  Score=51.51  Aligned_cols=71  Identities=10%  Similarity=0.026  Sum_probs=55.9

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEeCC-----------
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFIRG-----------  195 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI~G-----------  195 (277)
                      .+++||+...      +++|.+|+.+|+.+||+|+.+.|+..  .....++.++...  .++|.|.++|           
T Consensus         8 ~~~~Ly~~~~------s~~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~~~~g~~~~~~~~~~   79 (235)
T 3n5o_A            8 PNFELYGYFR------SSCSGRLRIAFHLKSIPYTRHPVNLLKGEQHSDTYKSLNPT--NTVPLLVVSNINNTVSPSSAS   79 (235)
T ss_dssp             CEEEEEECTT------CHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHHCTT--CCSCEEEEESSCCSSSTTCSE
T ss_pred             CCeEEEecCC------CcHHHHHHHHHHHcCCccEEEecccccccccCHHHHhcCCC--CCCCEEEeCCCccccccccCc
Confidence            4699999875      48999999999999999999888643  2334567777654  6899999988           


Q ss_pred             EEEechhHHHHH
Q 048504          196 KHVGNADVLKSM  207 (277)
Q Consensus       196 ~~IGG~del~~L  207 (277)
                      ..|.....+.+.
T Consensus        80 ~~l~eS~aI~~y   91 (235)
T 3n5o_A           80 FSIGQSLAALEY   91 (235)
T ss_dssp             EEECSHHHHHHH
T ss_pred             eeehhHHHHHHH
Confidence            888877776654

>4g10_A Glutathione S-transferase homolog; thioredoxin fold; HET: MSE GSH; 1.20A {Sphingomonas paucimobilis}

Probab=96.65  E-value=0.0037  Score=55.08  Aligned_cols=73  Identities=11%  Similarity=0.146  Sum_probs=52.5

Q ss_pred             CCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHH-HHHhCCCCCCCcEEEe-CCEEEechhHH
Q 048504          127 TEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKEL-QCVFGGKNVTLPQVFI-RGKHVGNADVL  204 (277)
Q Consensus       127 ~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reEL-ke~lG~~~~tvPqVFI-~G~~IGG~del  204 (277)
                      ..+.++||....      ||+|++|+.+|+.+||+|+.+.|+....--+.+ .++...  .+||.+-+ ||..|.....+
T Consensus         3 ~p~~~~LY~~~~------sP~~~rv~i~L~e~gi~ye~~~vd~~~~~pe~~~~~~nP~--g~VPvL~~d~g~~l~ES~aI   74 (265)
T 4g10_A            3 EPQELTIYHIPG------CPFSERVEIMLELKGLRMKDVEIDISKPRPDWLLAKTGGT--TALPLLDVENGESLKESMVI   74 (265)
T ss_dssp             CCCCCEEEECTT------CHHHHHHHHHHHHHTCCCEEEECCTTSCCCHHHHHHHTSC--CCSCEEECTTSCEEECHHHH
T ss_pred             CCCceEEEecCC------ChHHHHHHHHHHHhCCCCEEEEeCCCCCCcHHHHHhcCCC--CccceEEECCCeEEeccHHH
Confidence            345799999875      589999999999999999988776421111223 345443  68999987 77787776666


Q ss_pred             HHH
Q 048504          205 KSM  207 (277)
Q Consensus       205 ~~L  207 (277)
                      .+.
T Consensus        75 ~~Y   77 (265)
T 4g10_A           75 LRY   77 (265)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A

Probab=96.62  E-value=0.021  Score=42.19  Aligned_cols=57  Identities=18%  Similarity=0.327  Sum_probs=41.1

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      ||.|+.+|      |++|+.+...|+.    +  ++.+..+|++.+++    +.+.+|-  ..+|.+++  +|+.+.
T Consensus        28 vv~f~~~~------C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v--~~~Pt~~~~~~G~~~~   92 (112)
T 1ep7_A           28 VVDFTATW------CGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAA----VAEAAGI--TAMPTFHVYKDGVKAD   92 (112)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHH----HHHHHTC--CBSSEEEEEETTEEEE
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHH----HHHHcCC--CcccEEEEEECCeEEE
Confidence            55566665      5899988877765    3  58899999987754    4455654  68999877  887643

>3ay8_A Glutathione S-transferase; GST fold, GST binding, cytosolic; 2.10A {Bombyx mori}

Probab=96.61  E-value=0.0052  Score=51.36  Aligned_cols=71  Identities=6%  Similarity=-0.004  Sum_probs=55.7

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +++||+...      +++|.+|+.+|+..||+|+.+.++...  ....++.++...  .++|.+..||..|.+...+.+.
T Consensus         3 ~~~Ly~~~~------s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~~~g~~l~eS~aI~~y   74 (216)
T 3ay8_A            3 SLKLYHFPV------SGPSRGALLAARAIGIPIQIEIVNLFKKEQLQESFLKLNPQ--HCVPTLDDNNFVLWESRAIACY   74 (216)
T ss_dssp             CCEEEECTT------CHHHHHHHHHHHHHTCCCEEEECCTTCGGGCCHHHHHHSSS--CCSSEEEETTEEEECHHHHHHH
T ss_pred             ceEEecCCC------CccHHHHHHHHHHcCCCceEEEeccccccccCHHHHhhCCC--CCCCeEEECCEEEEcHHHHHHH
Confidence            578999875      489999999999999999998887531  223566666644  6899999999999888777764


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        75 L   75 (216)
T 3ay8_A           75 L   75 (216)
T ss_dssp             H
T ss_pred             H
Confidence            3

>4iel_A Glutathione S-transferase, N-terminal domain PROT; GST, glutathione S-transferase, enzyme function initiative, structural genomics; HET: GSH; 1.60A {Burkholderia ambifaria}

Probab=96.61  E-value=0.0033  Score=53.34  Aligned_cols=73  Identities=5%  Similarity=-0.030  Sum_probs=54.5

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHH
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLK  205 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~  205 (277)
                      +.-++||+...      +++|.+|+.+|+.+||+|+.+.|+...  ....++.++...  .++|.+.+||..|.+...+.
T Consensus        21 ~~m~~Ly~~~~------sp~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~   92 (229)
T 4iel_A           21 QSMLHILGKIP------SINVRKVLWLCTELNLPFEQEDWGAGFRTTNDPAYLALNPN--GLVPVIKDDGFVLWESNTII   92 (229)
T ss_dssp             -CCEEEESCTT------CHHHHHHHHHHHHHTCCEEEECCC-------CHHHHTTCTT--CCSCEEEETTEEEECHHHHH
T ss_pred             cceEEEecCCC------CcchHHHHHHHHHCCCCcEEEEecCCcCCcCCHHHHhcCCC--CCCCEEEECCEEEEeHHHHH
Confidence            34589998875      489999999999999999998887532  233455555443  68999999999999888877


Q ss_pred             HHH
Q 048504          206 SMY  208 (277)
Q Consensus       206 ~L~  208 (277)
                      +..
T Consensus        93 ~yL   95 (229)
T 4iel_A           93 RYL   95 (229)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            643

>2vo4_A 2,4-D inducible glutathione S-transferase; herbicide, TAU class GST, S-(P-nitrobenzyl- glutathione); HET: GTB 4NM; 1.75A {Glycine max} PDB: 3fhs_A*

Probab=96.58  E-value=0.0086  Score=50.10  Aligned_cols=72  Identities=11%  Similarity=0.033  Sum_probs=54.3

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      .+++||+...      |++|.+|+.+|+..||+|+.+.++.. ....++.++... ..++|.+..||..|.+...+.+..
T Consensus         3 ~~~~Ly~~~~------sp~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~~~~nP~-~g~vP~L~~~g~~l~eS~aI~~yL   74 (219)
T 2vo4_A            3 DEVVLLDFWP------SPFGMRVRIALAEKGIKYEYKEEDLR-NKSPLLLQMNPV-HKKIPVLIHNGKPICESLIAVQYI   74 (219)
T ss_dssp             CCEEEEECTT------CHHHHHHHHHHHHTTCCCEEEECCTT-SCCHHHHHHCTT-TCCSCEEEETTEEEESHHHHHHHH
T ss_pred             CceEEEeccC------CchHHHHHHHHHHcCCCceEEecCcc-cCCHHHHHhCCC-CCcCCEEEECCEeeehHHHHHHHH
Confidence            3689999875      58999999999999999998888643 122445555431 147999999999888877777643

>2c3n_A Glutathione S-transferase theta 1; glutathione transferase, polymorphism; 1.5A {Homo sapiens} PDB: 2c3q_A* 2c3t_A

Probab=96.58  E-value=0.0079  Score=51.88  Aligned_cols=70  Identities=14%  Similarity=0.102  Sum_probs=55.6

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      .|++|....|      |+|++|+.+|+..||+|+.+.|+...  ....++.++...  .++|.+..||..|.....+.+.
T Consensus         9 ~~~ly~~~~s------p~~rkv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~--gkVPvL~d~g~~l~ES~aI~~Y   80 (247)
T 2c3n_A            9 GLELYLDLLS------QPCRAVYIFAKKNDIPFELRIVDLIKGQHLSDAFAQVNPL--KKVPALKDGDFTLTESVAILLY   80 (247)
T ss_dssp             CEEEEECTTS------HHHHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHHCTT--CCSCEEEETTEEEECHHHHHHH
T ss_pred             ceEEeecCCC------hhHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCC--CcCcEEEECCEEEEcHHHHHHH
Confidence            5899999864      89999999999999999988887532  233556666544  6899999999998888777764

>1gwc_A Glutathione S-transferase TSI-1; herbicide detoxification, plant, TAU class; HET: GTX; 2.25A {Aegilops tauschii} SCOP: a.45.1.1 c.47.1.5

Probab=96.55  E-value=0.0075  Score=50.74  Aligned_cols=72  Identities=8%  Similarity=-0.020  Sum_probs=54.3

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      .+++||+...      |++|.+|+.+|+..||+|+.+.++.. ...+++.++... ..++|.+..||..|.+...+.+..
T Consensus         5 ~~~~Ly~~~~------sp~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~~~~nP~-~g~vP~L~~~g~~l~eS~aI~~yL   76 (230)
T 1gwc_A            5 DDLKLLGAWP------SPFVTRVKLALALKGLSYEDVEEDLY-KKSELLLKSNPV-HKKIPVLIHNGAPVCESMIILQYI   76 (230)
T ss_dssp             CCEEEEECTT------CHHHHHHHHHHHHHTCCCEEEECCTT-SCCHHHHHHSTT-TCCSCEEEETTEEEESHHHHHHHH
T ss_pred             CcEEEEeCCC------ChHHHHHHHHHHHcCCCCeEEecccc-cCCHHHHhhCCC-CCccCEEEECCEEeecHHHHHHHH
Confidence            5799999875      48999999999999999998888643 122345555421 147999999999988887777643

>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A

Probab=96.53  E-value=0.02  Score=41.52  Aligned_cols=57  Identities=18%  Similarity=0.370  Sum_probs=41.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      |+.|++++      |++|+.+...|+..      ++.+..+|++.+++    +.+.++-  ..+|.+++  +|+.+.
T Consensus        22 lv~f~~~~------C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~v--~~~Pt~~~~~~g~~~~   86 (109)
T 2yzu_A           22 LVDFWAEW------CAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPK----TAMRYRV--MSIPTVILFKDGQPVE   86 (109)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEECCC------CHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHh----HHHhCCC--CcCCEEEEEeCCcEee
Confidence            45555554      68999888777652      48899999988764    4555654  68999988  898653

>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...

Probab=96.53  E-value=0.028  Score=40.84  Aligned_cols=58  Identities=19%  Similarity=0.271  Sum_probs=43.0

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh-----CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG-----FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~-----~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      -|+.|+++|      |++|+++...|+.     .++.+..+|++.+++    +.+.++-  ..+|.+++  +|+.++
T Consensus        23 ~~v~f~~~~------C~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v--~~~Pt~~~~~~g~~~~   87 (105)
T 3m9j_A           23 VVVDFSATW------CGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQD----VASESEV--KSMPTFQFFKKGQKVG   87 (105)
T ss_dssp             EEEEEECTT------CHHHHHHHHHHHHHHHHSTTSEEEEEETTTCHH----HHHHTTC--CBSSEEEEEETTEEEE
T ss_pred             EEEEEECCC------ChhhHHHHHHHHHHHHHccCeEEEEEEhhhhHH----HHHHcCC--CcCcEEEEEECCeEEE
Confidence            355566665      5899999888876     368899999988764    4455654  78999877  888764

>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1

Probab=96.52  E-value=0.028  Score=42.08  Aligned_cols=56  Identities=18%  Similarity=0.237  Sum_probs=41.1

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-----CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-----FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-----~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+++|      |++|+++...|+.     .+|.|..+|++.++    ++.+.++-  ..+|.+++  +|+.+
T Consensus        30 lv~f~a~~------C~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~----~~~~~~~v--~~~Pt~~~~~~G~~~   92 (112)
T 1syr_A           30 IVDFFAEW------CGPCKRIAPFYEECSKTYTKMVFIKVDVDEVS----EVTEKENI--TSMPTFKVYKNGSSV   92 (112)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHCTTSEEEEEETTTTH----HHHHHTTC--CSSSEEEEEETTEEE
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHHcCCCEEEEEECCCCH----HHHHHcCC--CcccEEEEEECCcEE
Confidence            44455555      5899999888876     36899999998875    34555654  78998877  88764

>3m3m_A Glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics; HET: GSH; 1.75A {Pseudomonas fluorescens}

Probab=96.50  E-value=0.0076  Score=49.87  Aligned_cols=73  Identities=10%  Similarity=0.165  Sum_probs=54.8

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEe-CCEEEechhHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFI-RGKHVGNADVLKS  206 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI-~G~~IGG~del~~  206 (277)
                      .++||....      +++|.+|+.+|+..||+|+.+.|+..  .....++.++...  .++|.+.+ ||..|.+...+.+
T Consensus         3 ~~~Ly~~~~------s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~--g~vP~L~~d~g~~l~eS~aI~~   74 (210)
T 3m3m_A            3 LYKVYGDYR------SGNCYKIKLMLNLLGLPYEWQAVDILGGDTQTEAFLAKNPN--GKIPVLELEDGTCLWESNAILN   74 (210)
T ss_dssp             CEEEEECTT------SHHHHHHHHHHHHTTCCEEEEECCTTTTTTSSHHHHTTCTT--CCSCEEEETTSCEEECHHHHHH
T ss_pred             eEEEeCCCC------CCcHHHHHHHHHHcCCCCEEEEecCCCccccCHHHHhhCCC--CCCCEEEecCCEEEecHHHHHH
Confidence            478999875      47999999999999999999888752  1223455555433  68999996 8888888777776


Q ss_pred             HHhh
Q 048504          207 MYET  210 (277)
Q Consensus       207 L~Es  210 (277)
                      ..+.
T Consensus        75 yL~~   78 (210)
T 3m3m_A           75 FLAD   78 (210)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            5443

>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1

Probab=96.46  E-value=0.034  Score=40.93  Aligned_cols=57  Identities=11%  Similarity=0.187  Sum_probs=41.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      ||.|++++      |++|+++...|+.    +  .+.+..+|++.+++    +.+.++-  ..+|.+++  +|+.++
T Consensus        29 lv~f~~~~------C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~----~~~~~~v--~~~Pt~~~~~~G~~~~   93 (115)
T 1thx_A           29 LVYFWASW------CGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPT----TVKKYKV--EGVPALRLVKGEQILD   93 (115)
T ss_dssp             EEEEECTT------CTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEECCC------CHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHH----HHHHcCC--CceeEEEEEcCCEEEE
Confidence            55566665      5799988877765    2  48899999998764    4555654  68999988  898654

>1ljr_A HGST T2-2, glutathione S-transferase; HET: GSH; 3.20A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 2ljr_A 3ljr_A*

Probab=96.46  E-value=0.007  Score=51.85  Aligned_cols=69  Identities=13%  Similarity=0.079  Sum_probs=54.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      ++||+...      +++|.+|+.+|+..||+|+.+.|+...  ....++.++...  .++|.+..||..|.+...+.+.
T Consensus         3 ~~Ly~~~~------sp~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~d~g~~l~eS~aI~~Y   73 (244)
T 1ljr_A            3 LELFLDLV------SQPSRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSL--GKLPTLKDGDFILTESSAILIY   73 (244)
T ss_dssp             CEEEECTT------SHHHHHHHHHHHHTTCCCEEEECCTTTTGGGSHHHHTTCTT--CCSCEEEETTEEEECHHHHHHH
T ss_pred             EEEEecCC------CcchHHHHHHHHHcCCCCeEEEecccccccCCHHHHHhCCC--CcCcEEEECCEEEEchHHHHHH
Confidence            67898865      589999999999999999998887532  233556555533  6899999999999988887764

>1r5a_A Glutathione transferase; glutathione S-transferase, GST, GSH, mosquito, detoxification, xenobiotics; HET: GTS; 2.50A {Anopheles cracens} SCOP: a.45.1.1 c.47.1.5

Probab=96.45  E-value=0.011  Score=49.39  Aligned_cols=70  Identities=16%  Similarity=0.165  Sum_probs=54.2

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      .++||+...      +++|.+|+.+|+..||+|+.+.|+...  ....++.+....  .++|.+..||..|.+...+.+.
T Consensus         2 ~~~Ly~~~~------sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~~~g~~l~eS~aI~~y   73 (218)
T 1r5a_A            2 TTVLYYLPA------SPPCRSVLLLAKMIGVELDLKVLNIMEGEQLKPDFVELNPQ--HCIPTMDDHGLVLWESRVILSY   73 (218)
T ss_dssp             CEEEEECTT------CHHHHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHHTTCTT--CCSSEEEETTEEEECHHHHHHH
T ss_pred             eEEEEeCCC------ChhHHHHHHHHHHcCCCCeEEecCcccccccCHHHHhhCCC--CCcCEEEECCEEEEcHHHHHHH
Confidence            378999875      489999999999999999998887532  233555555433  6899999999999888777664

>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A

Probab=96.44  E-value=0.011  Score=43.93  Aligned_cols=56  Identities=16%  Similarity=0.306  Sum_probs=41.1

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+++|      |++|+.+...|+.+     ++.+..+|++.+++    +.+.++-  ..+|.+++  +|+.+
T Consensus        32 vv~f~~~~------C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~----~~~~~~v--~~~Pt~~~~~~g~~~   94 (118)
T 2vm1_A           32 IIDFTASW------CGPCRVIAPVFAEYAKKFPGAIFLKVDVDELKD----VAEAYNV--EAMPTFLFIKDGEKV   94 (118)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHH----HHHHTTC--CSBSEEEEEETTEEE
T ss_pred             EEEEECCC------CHhHHHHhHHHHHHHHHCCCcEEEEEEcccCHH----HHHHcCC--CcCcEEEEEeCCeEE
Confidence            55566665      58999888877653     68899999987754    4555654  68999877  88764

>3ic8_A Uncharacterized GST-like proteinprotein; glutathione, transferase, PSI, MCSG, structural genomics; 2.40A {Pseudomonas syringae PV}

Probab=96.42  E-value=0.008  Score=53.67  Aligned_cols=69  Identities=10%  Similarity=0.002  Sum_probs=55.8

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHh-CCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVF-GGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~l-G~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      .++||....+      ++|.+|+.+|+.+||+|+.++++.. ....++..+. +.  .++|.+.+||..|.+...+.+.
T Consensus         3 ~~~Ly~~~~s------p~~~kvr~~L~~~gi~ye~~~v~~~-~~~~~~~~~n~P~--g~vPvL~~~g~~l~eS~aI~~y   72 (310)
T 3ic8_A            3 ELILHHYPTS------LFAEKARLMLGFKGVNWRSVTIPSI-MPKPDLTALTGGY--RKTPVLQIGADIYCDTALMARR   72 (310)
T ss_dssp             CEEEEECTTC------GGGHHHHHHHHHHTCEEEEEECCSS-SCCHHHHHHHSSC--CCSCEEEETTEEECSHHHHHHH
T ss_pred             eEEEEecCCC------cHHHHHHHHHHhcCCCcEEEEcCCC-CCcHHHHHhcCCC--CceeEEEECCEEEcCHHHHHHH
Confidence            5899998764      7999999999999999999888653 2345666777 44  7899999999999888777664

>3ibh_A GST-II, saccharomyces cerevisiae GTT2; glutathione S-transferase, transferase; HET: GSH; 2.10A {Saccharomyces cerevisiae} PDB: 3erf_A* 3erg_A*

Probab=96.41  E-value=0.0077  Score=50.39  Aligned_cols=71  Identities=14%  Similarity=0.089  Sum_probs=54.4

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCC--eEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEE-eCCEEEechhH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRV--WVDERDVSMD--SAYKKELQCVFGGKNVTLPQVF-IRGKHVGNADV  203 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV--~y~ErDVs~d--~~~reELke~lG~~~~tvPqVF-I~G~~IGG~de  203 (277)
                      .+++||....      +++|.+|+.+|+.+||  +|+.++|+..  .....++.++...  .++|.+. .||..|.....
T Consensus        17 ~~~~Ly~~~~------sp~~~~v~~~L~~~gi~~~~~~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~~~~g~~l~eS~a   88 (233)
T 3ibh_A           17 QKMIIYDTPA------GPYPARVRIALAEKNMLSSVQFVRINLWKGEHKKPEFLAKNYS--GTVPVLELDDGTLIAECTA   88 (233)
T ss_dssp             --CEEEECTT------CHHHHHHHHHHHHTTCGGGCEEEECCGGGTGGGSHHHHHHCTT--CCSCEEECTTCCEEESHHH
T ss_pred             cceEEecCCC------CCccHHHHHHHHhcCCCCCceEEEeccccccccChHHhccCCC--CccceEEecCCeEEecHHH
Confidence            5799999875      4899999999999999  9998887643  2234566777654  6899998 68888888777


Q ss_pred             HHHH
Q 048504          204 LKSM  207 (277)
Q Consensus       204 l~~L  207 (277)
                      +.+.
T Consensus        89 I~~y   92 (233)
T 3ibh_A           89 ITEY   92 (233)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7664

>3f6d_A Adgstd4-4, glutathione transferase GST1-4; HET: GTX; 1.70A {Anopheles dirus} PDB: 3f63_A* 1jlw_A* 3g7i_A* 3g7j_A*

Probab=96.40  E-value=0.0083  Score=49.96  Aligned_cols=70  Identities=14%  Similarity=0.115  Sum_probs=54.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEe-CCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFI-RGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI-~G~~IGG~del~~L  207 (277)
                      +.||+...      +++|.+|+.+|+.+||+|+.+.|+..  .....++.++...  .++|.+.. ||..|.....+.+.
T Consensus         1 m~Ly~~~~------s~~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~P~--g~vP~L~~~~g~~l~eS~aI~~y   72 (219)
T 3f6d_A            1 MDFYYLPG------SAPCRAVQMTAAAVGVELNLKLTNLMAGEHMKPEFLKLNPQ--HCIPTLVDEDGFVLWESRAIQIY   72 (219)
T ss_dssp             CEEEECTT------CHHHHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHHHCTT--CCSCEEECTTSCEEESHHHHHHH
T ss_pred             CEEEeCCC------CCchHHHHHHHHHcCCCceEEEccCcccccCCHHHHhhCCC--CccCeEEeCCCCEEEcHHHHHHH
Confidence            46888875      48999999999999999998888653  2234566777644  68999999 99999888887764


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        73 L   73 (219)
T 3f6d_A           73 L   73 (219)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2hnl_A Glutathione S-transferase 1; prostaglandin synthase, river BLI onchocerca volvulus, immune modulation; HET: GSH; 2.00A {Onchocerca volvulus}

Probab=96.40  E-value=0.0083  Score=50.88  Aligned_cols=71  Identities=13%  Similarity=0.152  Sum_probs=55.7

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +.+++||+...+      ++|.+|+.+|+..||+|+.+.|+.  +...++.+....  .++|.+..||..|.+...+.+.
T Consensus        25 m~~~~Ly~~~~s------~~~~~vr~~L~~~gi~ye~~~v~~--~~~~~~~~~nP~--g~vPvL~~~g~~l~eS~aI~~Y   94 (225)
T 2hnl_A           25 MEKYTLTYFNGR------GRAEVIRLLFALANVSYEDNRITR--DEWKYLKPRTPF--GHVPMLNVSGNVLGESHAIELL   94 (225)
T ss_dssp             CCCEEEEEESSS------GGGHHHHHHHHHHTCCCEEEEECH--HHHHHHGGGSSS--SCSCEEEETTEEEECHHHHHHH
T ss_pred             CCCeEEEEcCCC------CchHHHHHHHHHCCCCeeEEEeCh--hhhHHhccCCCC--CCCCEEEECCEEEecHHHHHHH
Confidence            446899998754      799999999999999999988874  223455555543  6899999999999888877764


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        95 L   95 (225)
T 2hnl_A           95 L   95 (225)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1z9h_A Membrane-associated prostaglandin E synthase-2; membran associated protein, indomethacin, isomerase; HET: IMN; 2.60A {Macaca fascicularis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pbj_A*

Probab=96.40  E-value=0.0034  Score=55.74  Aligned_cols=71  Identities=13%  Similarity=0.133  Sum_probs=52.4

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeC--C--EEEechhH
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIR--G--KHVGNADV  203 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~--G--~~IGG~de  203 (277)
                      ...++||+...      |++|.+|+.+|+.+||+|+.++|+...  ..++ ++.+.  .++|.|.++  |  ..|.....
T Consensus        12 ~~~~~Ly~~~~------sp~~~~v~~~L~~~gi~~~~~~v~~~~--~~~~-~~~p~--~~vP~l~~~~~g~~~~l~eS~a   80 (290)
T 1z9h_A           12 RLQLTLYQYKT------CPFCSKVRAFLDFHALPYQVVEVNPVL--RAEI-KFSSY--RKVPILVAQEGESSQQLNDSSV   80 (290)
T ss_dssp             -CEEEEEECTT------CHHHHHHHHHHHHTTCCEEEEECCTTT--CGGG-TTCSC--CSSCEEEEEETTEEEEECSHHH
T ss_pred             CCCEEEEeCCC------ChHHHHHHHHHHHcCCCeEEEECChhh--HHHH-HHcCC--CCCCEEEECCCCCeEEecCHHH
Confidence            34699999875      589999999999999999999996321  1233 23333  789999985  3  68888888


Q ss_pred             HHHHHh
Q 048504          204 LKSMYE  209 (277)
Q Consensus       204 l~~L~E  209 (277)
                      +.+..+
T Consensus        81 I~~yL~   86 (290)
T 1z9h_A           81 IISALK   86 (290)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            776543

>2yv7_A CG10997-PA, LD46306P, CLIC; dmclic, chloride ION channel, GST fold, metal transport; 1.70A {Drosophila melanogaster}

Probab=96.39  E-value=0.0088  Score=52.87  Aligned_cols=79  Identities=10%  Similarity=0.065  Sum_probs=55.2

Q ss_pred             CCcEEEEEecCC---CCCCCChhHHHHHHHH----HhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEec
Q 048504          128 EDRIVVYLTSLR---GIRRTFEDCYAVRMIF----RGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGN  200 (277)
Q Consensus       128 ~~kVVLYttSlc---giR~Tc~~C~~Vk~iL----~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG  200 (277)
                      +..|+||.....   .....||+|++|+.+|    +.+||+|+.+.|+.. ...+++.++...  ..+|.+..||..|..
T Consensus        20 ~~~i~Ly~~~~s~~~~~~~~cP~~~rv~~~L~ll~~~~gi~ye~~~v~~~-~~~~~~~~~nP~--gkVPvL~d~g~~l~E   96 (260)
T 2yv7_A           20 VPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQ-KPPPDFRTNFEA--THPPILIDNGLAILE   96 (260)
T ss_dssp             CCEEEEEEEBCTTTSSSBCCCHHHHHHHHHHHHHHHTTSSEEEEEEECTT-SCC-----CCTT--CCSCEEEETTEEECS
T ss_pred             CccEEEEEeccCCCCCccCcChHHHHHHHHHHhHHHhcCCCceEEEeccc-cCCHHHHhhCCC--CCCCEEEECCEEEeC
Confidence            446999976533   3456899999999999    889999998877643 122345555433  689999999999888


Q ss_pred             hhHHHHHHh
Q 048504          201 ADVLKSMYE  209 (277)
Q Consensus       201 ~del~~L~E  209 (277)
                      ...+.+..+
T Consensus        97 S~aI~~YL~  105 (260)
T 2yv7_A           97 NEKIERHIM  105 (260)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            777776543

>2gsq_A Squid GST, glutathione S-transferase; squid digestive gland, sigma class; HET: GBI; 2.20A {Ommastrephes sloani} SCOP: a.45.1.1 c.47.1.5 PDB: 1gsq_A*

Probab=96.39  E-value=0.0076  Score=49.67  Aligned_cols=69  Identities=13%  Similarity=0.143  Sum_probs=54.2

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      +++||+...+      ++|.+|+.+|+..||+|+.+.++.+  ...++.+....  ..+|.+..||..|.+...+.+..
T Consensus         2 ~~~Ly~~~~s------~~~~~v~~~L~~~gi~~e~~~v~~~--~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~yL   70 (202)
T 2gsq_A            2 KYTLHYFPLM------GRAELCRFVLAAHGEEFTDRVVEMA--DWPNLKATMYS--NAMPVLDIDGTKMSQSMCIARHL   70 (202)
T ss_dssp             CEEEEECSSS------GGGHHHHHHHHHTTCCCEEEECCTT--THHHHGGGSGG--GSSCEEEETTEEECCHHHHHHHH
T ss_pred             CcEEEEcCCC------chhHHHHHHHHHcCCCeeEEEeCHH--HHHhhcccCCC--CCCCEEEECCEEEecHHHHHHHH
Confidence            4789988754      7999999999999999999988753  23455555433  58999999999999888877744

>4ags_A Thiol-dependent reductase 1; transferase, leishmaniasis, DE-gluathionylation; HET: MSE GSH; 2.30A {Leishmania infantum}

Probab=96.37  E-value=0.01  Score=55.62  Aligned_cols=72  Identities=13%  Similarity=0.181  Sum_probs=57.2

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCC---EEEechhHH
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRG---KHVGNADVL  204 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G---~~IGG~del  204 (277)
                      +..++||+...      |++|.+|+.+|+.+||+|+.+.|+......+++.++...  .++|.+.++|   ..|.....+
T Consensus        24 ~~~~~Ly~~~~------sp~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~nP~--g~vP~L~~~~~~g~~l~eS~aI   95 (471)
T 4ags_A           24 ARALKLYVSAT------CPFCHRVEIVAREKQVSYDRVAVGLREEMPQWYKQINPR--ETVPTLEVGNADKRFMFESMLI   95 (471)
T ss_dssp             -CCEEEEECTT------CHHHHHHHHHHHHTTCCCEEEECCCGGGCCHHHHHHCTT--CCSCEEEECSSSCEEEESHHHH
T ss_pred             CCceEEECCCC------CchHHHHHHHHHHcCCCCEEEEeCCCCCccHHHHhhCCC--CccCeEEECCcCeEEEecHHHH
Confidence            45799999865      589999999999999999999987644344567777654  6899999987   888877776


Q ss_pred             HHH
Q 048504          205 KSM  207 (277)
Q Consensus       205 ~~L  207 (277)
                      .+.
T Consensus        96 ~~y   98 (471)
T 4ags_A           96 AQY   98 (471)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>3m8n_A Possible glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, nysgxrc; 2.04A {Rhodopseudomonas palustris}

Probab=96.33  E-value=0.0083  Score=50.55  Aligned_cols=73  Identities=10%  Similarity=0.093  Sum_probs=54.8

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEe-CCEEEechhHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFI-RGKHVGNADVLKS  206 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI-~G~~IGG~del~~  206 (277)
                      .++||+...      +++|.+|+.+|+.+||+|+.+.|+...  ....++.++...  .++|.|.+ ||..|.....+.+
T Consensus         3 ~~~Ly~~~~------sp~~~~vr~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~--g~vP~L~~~~g~~l~eS~aI~~   74 (225)
T 3m8n_A            3 LYKLYSMQR------SGNSYKVRLALALLDAPYRAVEVDILRGESRTPDFLAKNPS--GQVPLLETAPGRYLAESNAILW   74 (225)
T ss_dssp             CEEEEECTT------CHHHHHHHHHHHHTTCCEEEEECCGGGTTTSSHHHHTTCTT--CCSSEEECSTTCEEECHHHHHH
T ss_pred             ceEEecCCC------CCCHHHHHHHHHHcCCCeEEEEeCCCCCccCCHHHHHhCCC--CCCCEEEeCCCCEEEcHHHHHH
Confidence            478999875      489999999999999999998886421  223455555433  68999997 7788888877776


Q ss_pred             HHhh
Q 048504          207 MYET  210 (277)
Q Consensus       207 L~Es  210 (277)
                      ..+.
T Consensus        75 yL~~   78 (225)
T 3m8n_A           75 YLAV   78 (225)
T ss_dssp             HHHT
T ss_pred             HHHc
Confidence            5443

>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}

Probab=96.33  E-value=0.031  Score=40.67  Aligned_cols=57  Identities=12%  Similarity=0.252  Sum_probs=41.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      |+.|++++      |++|+++...|+.      .++.+..+|++.+++    +.+..|-  ..+|.+++  +|+.++
T Consensus        24 lv~f~~~~------C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~v--~~~Pt~~~~~~G~~~~   88 (107)
T 2i4a_A           24 LVDFWAEW------CGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPE----TPNAYQV--RSIPTLMLVRDGKVID   88 (107)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEECCC------ChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHH----HHHhcCC--CccCEEEEEeCCEEEE
Confidence            44455554      6899988887765      258889999988764    4455654  78999988  998754

>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*

Probab=96.32  E-value=0.05  Score=40.93  Aligned_cols=58  Identities=16%  Similarity=0.251  Sum_probs=41.8

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh----C-CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG----F-RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~----~-gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      -||.|+++|      |++|+.+...|+.    + ++.|..+|++.+++    +.+.+|-  ..+|.+++  +|+.++
T Consensus        37 ~vv~f~~~~------C~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v--~~~Pt~~~~~~G~~~~  101 (122)
T 2vlu_A           37 VVIDFTASW------CGPCRIMAPVFADLAKKFPNAVFLKVDVDELKP----IAEQFSV--EAMPTFLFMKEGDVKD  101 (122)
T ss_dssp             EEEEEECTT------CHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEEECCC------CHHHHHHHHHHHHHHHHCCCcEEEEEECCCCHH----HHHHcCC--CcccEEEEEeCCEEEE
Confidence            355666665      5899988887765    2 58899999988754    4455654  68999877  887643

>3m0f_A Uncharacterized protein GST_N; PSI-2, NYSGXRC, glutathione, structural genomics, protein structure initiative; HET: GSH; 1.60A {Pseudomonas fluorescens} PDB: 3lxt_A*

Probab=96.25  E-value=0.0075  Score=50.01  Aligned_cols=69  Identities=9%  Similarity=0.073  Sum_probs=54.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE-eCCEEEechhHHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF-IRGKHVGNADVLKSMY  208 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF-I~G~~IGG~del~~L~  208 (277)
                      +.||+...      +++|.+|+.+|+.+||+|+.+.|+.... .+++.++...  .++|.+. .||..|.....+.+..
T Consensus         3 ~~Ly~~~~------sp~~~~v~~~l~~~gi~~e~~~v~~~~~-~~~~~~~nP~--g~vP~L~~~~g~~l~eS~aI~~yL   72 (213)
T 3m0f_A            3 LKLIGMLD------SPYVRRVAISLKSLGLPFEHHSLSVFST-FEQFKAINPV--VKAPTLVCEGGEVLMDSSLIIDYL   72 (213)
T ss_dssp             CEEESCTT------SHHHHHHHHHHHHHTCCCEEECCCTTTT-HHHHHHHCTT--CCSSEEECTTCCEEESHHHHHHHH
T ss_pred             EEEecCCC------CCcHHHHHHHHHHCCCCcEEEEecCCCC-cHHHHhcCCC--CCcCeEEeCCCcEEEcHHHHHHHH
Confidence            57887765      5899999999999999999988875432 4677777654  5899998 6888888877776643

>3niv_A Glutathione S-transferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.30A {Legionella pneumophila subsp}

Probab=96.23  E-value=0.0099  Score=49.73  Aligned_cols=70  Identities=13%  Similarity=0.208  Sum_probs=46.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH----HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS----AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~----~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      ++||+...      +++|.+|+.+|+.+||+|+.+.|+...    ....++.++...  .++|.|..||..|.....+.+
T Consensus         3 ~~Ly~~~~------s~~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~   74 (222)
T 3niv_A            3 LILYDYFR------STACYRVRIALNLKKIAYEKIEVHLVNNGGEQHSLQYHQINPQ--ELVPSLDINGQILSQSMAIID   74 (222)
T ss_dssp             -CEEECTT------CHHHHHHHHHHHHTTCCCCEEECCC---------------------CCSEEEETTEEEECHHHHHH
T ss_pred             EEEEcCCC------CcHHHHHHHHHHHcCCCcEEEEeccccccccccCHHHHhcCCC--CCcCEEEECCEEeecHHHHHH
Confidence            57888765      489999999999999999988887543    234556666544  689999999999988877776


Q ss_pred             HH
Q 048504          207 MY  208 (277)
Q Consensus       207 L~  208 (277)
                      ..
T Consensus        75 yL   76 (222)
T 3niv_A           75 YL   76 (222)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C

Probab=96.21  E-value=0.052  Score=39.24  Aligned_cols=56  Identities=11%  Similarity=0.298  Sum_probs=40.0

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      |+.|++++      |++|+.+...|+.    +  .+.+..+|++.+++    +.+.+|-  ..+|.+++  +|+.+
T Consensus        22 ~v~f~~~~------C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~v--~~~Pt~~~~~~g~~~   85 (105)
T 1fb6_A           22 MVDFWAPW------CGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPG----IATQYNI--RSIPTVLFFKNGERK   85 (105)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEE
T ss_pred             EEEEECCC------ChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHH----HHHhCCC--CcccEEEEEeCCeEE
Confidence            55555555      6899988877764    3  38888999988754    4455654  68999877  88754

>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}

Probab=96.21  E-value=0.049  Score=40.21  Aligned_cols=56  Identities=9%  Similarity=0.333  Sum_probs=40.1

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+.+|      |+.|+++...|+.    +  .+.+..+|++.+++    +.+.+|-  ..+|.+++  +|+.+
T Consensus        27 vv~f~~~~------C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~v--~~~Pt~~~~~~G~~~   90 (112)
T 1t00_A           27 LVDFWAAW------CGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPG----TAAKYGV--MSIPTLNVYQGGEVA   90 (112)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEE
T ss_pred             EEEEECCC------CHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHH----HHHhCCC--CcccEEEEEeCCEEE
Confidence            55556655      5899988877764    3  48899999988754    4455654  68999877  88754

>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1

Probab=96.20  E-value=0.029  Score=43.33  Aligned_cols=57  Identities=16%  Similarity=0.255  Sum_probs=41.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      ||.|+++|      |+.|+++...|+.+     +|.|..+|++.+.+    +.+.+|-  ..+|.+++  +|+.+.
T Consensus        42 vv~f~a~w------C~~C~~~~~~l~~l~~~~~~v~~~~vd~d~~~~----l~~~~~v--~~~Pt~~~~~~G~~~~  105 (124)
T 1xfl_A           42 VVDFTASW------CGPCRFIAPFFADLAKKLPNVLFLKVDTDELKS----VASDWAI--QAMPTFMFLKEGKILD  105 (124)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHCSSEEEEEEETTTSHH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHHCCCcEEEEEECccCHH----HHHHcCC--CccCEEEEEECCEEEE
Confidence            44556665      58999888877653     68888999987753    4555664  78999877  898653

>1vf1_A Glutathione S-transferase 3; detoxification; HET: GSH; 1.77A {Gallus gallus} PDB: 1vf2_A* 1vf3_A* 1vf4_A

Probab=96.20  E-value=0.025  Score=47.89  Aligned_cols=73  Identities=15%  Similarity=0.067  Sum_probs=54.8

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      ..++||+...+      ++|.+|+.+|+..||+|+.+.++..+. ..++++.......++|.+..||..|.....+.+..
T Consensus         3 ~~~~Ly~~~~s------~~~~~vr~~L~~~gi~ye~~~v~~~~~-~~~~~~~~~nP~g~vP~L~~~g~~l~eS~aI~~YL   75 (229)
T 1vf1_A            3 AKPVLYYFNGR------GKMESIRWLLAAAGVEFEEVFLETREQ-YEKLLQSGILMFQQVPMVEIDGMKLVQTRAILNYI   75 (229)
T ss_dssp             CCCEEEECSSC------TTTHHHHHHHHHTTCCCEEEECCSHHH-HHHHHHHTCSTTSCSCEEEETTEEEESHHHHHHHH
T ss_pred             CCeEEEEeCCC------chhHHHHHHHHHcCCCCeeEecCcHHH-HHHHHHhcCCCCCCCCEEEECCEEEEcHHHHHHHH
Confidence            35789987654      699999999999999999999874332 34555551112368999999999998888877644

>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1

Probab=96.20  E-value=0.046  Score=39.94  Aligned_cols=56  Identities=11%  Similarity=0.325  Sum_probs=39.9

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      |+.|++++      |++|+.+...|+.    +  .+.+..+|++.+++    +.+.+|-  ..+|.+++  +|+.+
T Consensus        23 lv~f~~~~------C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~v--~~~Pt~~~~~~G~~~   86 (107)
T 1dby_A           23 LVDFWAPW------CGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPN----VASEYGI--RSIPTIMVFKGGKKC   86 (107)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH----HHHHHTC--CSSCEEEEESSSSEE
T ss_pred             EEEEECCC------CHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHH----HHHHCCC--CcCCEEEEEeCCEEE
Confidence            55555555      5899988877765    3  48889999988764    4455664  68999877  77653

>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}

Probab=96.19  E-value=0.029  Score=44.04  Aligned_cols=55  Identities=15%  Similarity=0.229  Sum_probs=40.5

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhC----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe----CCE
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGF----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI----RGK  196 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI----~G~  196 (277)
                      -||.|+++|      |+.|+++...|+.+    +|.|..+|++.+.    +|.+.+|-  ..+|.+++    +|+
T Consensus        43 vvv~F~a~w------C~~C~~~~p~l~~l~~~~~v~~~~vd~~~~~----~l~~~~~v--~~~Pt~~~~~~~~g~  105 (133)
T 3cxg_A           43 IVIKFGAVW------CKPCNKIKEYFKNQLNYYYVTLVDIDVDIHP----KLNDQHNI--KALPTFEFYFNLNNE  105 (133)
T ss_dssp             EEEEEECTT------CHHHHHTHHHHHGGGGTEECEEEEEETTTCH----HHHHHTTC--CSSSEEEEEEEETTE
T ss_pred             EEEEEECCC------CHHHHHHHHHHHHHHHhcCEEEEEEeccchH----HHHHhcCC--CCCCEEEEEEecCCC
Confidence            355666666      57999999888865    4778888988765    45555664  78999865    897

>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A

Probab=96.19  E-value=0.023  Score=45.47  Aligned_cols=57  Identities=7%  Similarity=0.178  Sum_probs=42.8

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      -||.|+.+|      |+.|+++...|+.+     +|.|..+|++.+++    +.+.+|-  ..+|.+++  +|+.+
T Consensus        35 vvv~F~a~w------C~~C~~~~p~l~~l~~~~~~v~~~~vd~~~~~~----l~~~~~v--~~~Pt~~~~~~G~~~   98 (153)
T 2wz9_A           35 LVVHFWAPW------APQCAQMNEVMAELAKELPQVSFVKLEAEGVPE----VSEKYEI--SSVPTFLFFKNSQKI   98 (153)
T ss_dssp             EEEEEECTT------CHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHH----HHHHTTC--CSSSEEEEEETTEEE
T ss_pred             EEEEEECCC------CHhHHHHHHHHHHHHHHcCCeEEEEEECCCCHH----HHHHcCC--CCCCEEEEEECCEEE
Confidence            355666666      58999988887764     79999999988754    4555654  78999977  99865

>4f03_A Glutathione transferase; GST fold; 1.80A {Phanerochaete chrysosporium} PDB: 4g19_A*

Probab=96.18  E-value=0.023  Score=47.97  Aligned_cols=78  Identities=17%  Similarity=0.164  Sum_probs=51.9

Q ss_pred             CcEEEEEecCCC---CCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCC----------CCCCCcEEEe--
Q 048504          129 DRIVVYLTSLRG---IRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGG----------KNVTLPQVFI--  193 (277)
Q Consensus       129 ~kVVLYttSlcg---iR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~----------~~~tvPqVFI--  193 (277)
                      .+|++|--....   -...+|+|.+||.+|+-+||+|+.+.|+.. +....+... |.          ...+||.|..  
T Consensus         3 ~pi~lYd~~~~~~~~~~~~SP~~~kvr~~L~~kgi~y~~~~v~~~-~~~~~~~~~-g~~~~~~~~~~~P~~~VPvL~~~d   80 (253)
T 4f03_A            3 QPIVFYDIPSNERIKHSPWSPNTWKIRYALNYKGLKYKTEWVEYP-DIAGVVQKL-GGKPTEKTPDGRDHYTLPVIYDPN   80 (253)
T ss_dssp             CCEEEEECCCCGGGTTCCCCHHHHHHHHHHHHHTCCEEEEECCGG-GHHHHHHHH-TCCCSEECTTCCEECCSCEEEETT
T ss_pred             CCeEEeecCCCCCCCCCCcChhHHHHHHHHHHcCCCCEEEEEccc-cchhhhhhc-CCCCchhhHhhCCCCccCeEEeCC
Confidence            468999533210   123579999999999999999999888753 222333332 21          1257999987  


Q ss_pred             CCEEEechhHHHHHH
Q 048504          194 RGKHVGNADVLKSMY  208 (277)
Q Consensus       194 ~G~~IGG~del~~L~  208 (277)
                      +|..|.....+.+..
T Consensus        81 ~g~~l~ES~aI~~YL   95 (253)
T 4f03_A           81 TKKVVEDSAAIAKYL   95 (253)
T ss_dssp             TTEEEESHHHHHHHH
T ss_pred             CCEEEecHHHHHHHH
Confidence            578888777766643

>3ein_A GST class-theta, glutathione S-transferase 1-1; delta-class GST; HET: GSH; 1.13A {Drosophila melanogaster} PDB: 3mak_A* 3f6f_A 3gh6_A* 1jlv_A*

Probab=96.17  E-value=0.0085  Score=49.54  Aligned_cols=69  Identities=14%  Similarity=0.197  Sum_probs=53.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +.||+...      +++|.+|+.+|+.+||+|+.+.|+...  ....++.++...  .++|.+..||..|.....+.+.
T Consensus         2 ~~Ly~~~~------s~~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~y   72 (209)
T 3ein_A            2 VDFYYLPG------SSPCRSVIMTAKAVGVELNKKLLNLQAGEHLKPEFLKINPQ--HTIPTLVDNGFALWESRAIQVY   72 (209)
T ss_dssp             CEEEECTT------CHHHHHHHHHHHHHTCCCEEEECCGGGTGGGSHHHHTTCTT--CCSCEEEETTEEEECHHHHHHH
T ss_pred             eEEecCCC------CccHHHHHHHHHHcCCCcEEEEcccccCCcCCHHHHhcCCC--CCCCEEEECCEEEEcHHHHHHH
Confidence            46888875      489999999999999999988886532  234555555543  6899999999999888777664

>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0

Probab=96.17  E-value=0.046  Score=40.06  Aligned_cols=56  Identities=18%  Similarity=0.221  Sum_probs=41.1

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+++|      |+.|+.+...|+..      ++.|..+|++.+++    |.+.++-  ..+|.+++  +|+.+
T Consensus        26 lv~f~a~~------C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~----l~~~~~v--~~~Pt~~~~~~g~~~   89 (111)
T 3gnj_A           26 LVMFSRKN------CHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKT----LFQRFSL--KGVPQILYFKDGEYK   89 (111)
T ss_dssp             EEEEECSS------CHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHH----HHHHTTC--CSSCEEEEEETTEEE
T ss_pred             EEEEeCCC------ChhHHHHHHHHHHHHHHcCCceEEEEEECCcChh----HHHhcCC--CcCCEEEEEECCEEE
Confidence            55566665      58999988888752      48899999988764    4555654  78998866  88765

>1k3y_A GSTA1-1, glutathione S-transferase A1; S-hexyl glutatione, water structu transferase; HET: GTX; 1.30A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1gsf_A* 1guh_A* 1gsd_A* 1k3o_A 1k3l_A* 1pl1_A* 1pkz_A 1pkw_A* 2r6k_A* 1gse_A* 3u6v_A 1usb_A* 1ydk_A* 3q74_A 3ktl_A* 1pl2_A* 2r3x_A* 1xwg_A 3l0h_A* 1ags_A* ...

Probab=96.17  E-value=0.013  Score=49.14  Aligned_cols=72  Identities=13%  Similarity=0.027  Sum_probs=53.8

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      .++||+...+      ++|.+|+.+|+..||+|+.+.++..+. ..+++........++|.+-.||..|.....+.+..
T Consensus         3 ~~~Ly~~~~s------~~~~~vr~~L~~~gi~ye~~~v~~~~~-~~~~~~~~~nP~g~vPvL~~~g~~l~eS~aI~~yL   74 (221)
T 1k3y_A            3 KPKLHYFNAR------GRMESTRWLLAAAGVEFEEKFIKSAED-LDKLRNDGYLMFQQVPMVEIDGMKLVQTRAILNYI   74 (221)
T ss_dssp             CCEEEEESSS------TTTHHHHHHHHHHTCCCEEEEECSHHH-HHHHHHTTCCTTSCSCEEEETTEEEESHHHHHHHH
T ss_pred             CcEEEEeCCC------chhHHHHHHHHHcCCCceEEEeCchhH-HHHHhhhcCCCCCCCCEEEECCEEEecHHHHHHHH
Confidence            4789987754      799999999999999999988874332 24455541112368999999999998888777644

>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...

Probab=96.16  E-value=0.037  Score=40.49  Aligned_cols=56  Identities=13%  Similarity=0.336  Sum_probs=40.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+++|      |++|+.+...|+.    +  .+.+..+|++.+++    +.+.+|-  ..+|.+++  +|+.+
T Consensus        24 ~v~f~~~~------C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~v--~~~Pt~~~~~~G~~~   87 (108)
T 2trx_A           24 LVDFWAEW------CGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG----TAPKYGI--RGIPTLLLFKNGEVA   87 (108)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTT----HHHHTTC--CSSSEEEEEETTEEE
T ss_pred             EEEEECCC------CHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHH----HHHHcCC--cccCEEEEEeCCEEE
Confidence            45555555      5899988877765    2  47888999988764    4445654  68999987  88764

>4hz2_A Glutathione S-transferase domain; glutathione,enzyme function initiative; HET: GSH; 1.50A {Xanthobacter autotrophicus}

Probab=96.15  E-value=0.013  Score=49.82  Aligned_cols=72  Identities=10%  Similarity=0.099  Sum_probs=55.9

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEE-eCCEEEechhHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVF-IRGKHVGNADVLKS  206 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVF-I~G~~IGG~del~~  206 (277)
                      .++||+...      +++|.+|+.+|+..||+|+.+.|+..  .....++.++...  .++|.+. .||..|.+...+.+
T Consensus        22 m~~Ly~~~~------sp~~~~vr~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~--g~vPvL~~~~g~~l~eS~aI~~   93 (230)
T 4hz2_A           22 SMRIYGMNG------SGNCWKAAQILSLTGHDFEWVETSSGAAGTRSADFLALNAI--GKVPVVVLDDGTALRESNAILL   93 (230)
T ss_dssp             CCEEEECTT------CHHHHHHHHHHHHTTCCCEEEECCSSTTTTTSHHHHHHCTT--CCSCEEECTTSCEEECHHHHHH
T ss_pred             hheeeCCCC------CccHHHHHHHHHHcCCCceEEEecCCCCccCCHHHHhhCCC--CCCCEEEecCCEEeeCHHHHHH
Confidence            378999875      48999999999999999998888643  1234566666644  6899999 88888888877776


Q ss_pred             HHh
Q 048504          207 MYE  209 (277)
Q Consensus       207 L~E  209 (277)
                      ..+
T Consensus        94 yL~   96 (230)
T 4hz2_A           94 HFA   96 (230)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            544

>3ubk_A Glutathione transferase; GSH binding; 1.95A {Leptospira interrogans serovar lai} PDB: 3ubl_A*

Probab=96.13  E-value=0.0063  Score=52.11  Aligned_cols=68  Identities=9%  Similarity=0.040  Sum_probs=52.9

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      .++||+...      +++|.+|+.+|+..||+|+.+.|..+  ...++.++...  .++|.+.++|..|.....+.+.
T Consensus         3 ~~~Ly~~~~------sp~~~~v~~~L~~~gi~ye~~~v~~~--~~~~~~~~nP~--g~vPvL~~~~~~l~eS~aI~~Y   70 (242)
T 3ubk_A            3 MIKLHGASI------SNYVNKVKLGILEKGLEYEQIRIAPS--QEEDFLKISPM--GKIPVLEMDGKFIFESGAILEF   70 (242)
T ss_dssp             CEEEESCTT------CHHHHHHHHHHHHHTCCEEEECCCCC--CCHHHHTTSTT--CCSCEEEETTEEECCHHHHHHH
T ss_pred             eEEEEeCCC------ChHHHHHHHHHHHcCCCcEEEecCCc--cCHHHHhcCCC--CCcCeEEECCceEecHHHHHHH
Confidence            478998875      58999999999999999999998543  23455555543  6899999999888777666653

>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}

Probab=96.12  E-value=0.048  Score=42.46  Aligned_cols=56  Identities=23%  Similarity=0.411  Sum_probs=40.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+++|      |+.|..+...|+.    +  +|.|..+|++.+.+    +.+.++-  ..+|.+++  +|+.+
T Consensus        54 vv~f~~~~------C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~----l~~~~~v--~~~Pt~~~~~~G~~~  117 (140)
T 1v98_A           54 LVDFFAPW------CGPCRLVSPILEELARDHAGRLKVVKVNVDEHPG----LAARYGV--RSVPTLVLFRRGAPV  117 (140)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEE
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHHccCceEEEEEECCCCHH----HHHHCCC--CccCEEEEEeCCcEE
Confidence            44555554      6899988887775    2  48889999988754    4555654  68999977  88864

>3vk9_A Glutathione S-transferase delta; glutathione binding; 2.00A {Bombyx mori}

Probab=96.12  E-value=0.015  Score=48.84  Aligned_cols=69  Identities=16%  Similarity=0.206  Sum_probs=54.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCC--CHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSM--DSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~--d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +.||..+.+      ++|++|+.+|+.+||+|+.+.|+.  ......++.++...  .++|.+..||..|.....+.+.
T Consensus         3 mkLY~~~~S------~~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~d~g~~l~eS~aI~~Y   73 (216)
T 3vk9_A            3 IDLYYVPGS------APCRAVLLTAKALNLNLNLKLVDLHHGEQLKPEYLKLNPQ--HTVPTLVDDGLSIWESRAIITY   73 (216)
T ss_dssp             CEEEECTTC------HHHHHHHHHHHHHTCCCEEEECCGGGTGGGSHHHHHHCTT--CCSCEEEETTEEECCHHHHHHH
T ss_pred             EEEEeCCCC------hhHHHHHHHHHHcCCCCEEEEeCCCCCccCCHHHHHhCCC--CccceEecCCceeechHHHHHH
Confidence            679998754      899999999999999998777653  33345677777643  6899999999998887777664

>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A

Probab=96.10  E-value=0.061  Score=40.79  Aligned_cols=56  Identities=16%  Similarity=0.258  Sum_probs=40.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+++|      |+.|+++...|+.    +  +|.|..+|++.+.+    +.+.++-  ..+|.+++  +|+.+
T Consensus        35 lv~f~a~~------C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~----l~~~~~v--~~~Pt~~~~~~G~~~   98 (119)
T 1w4v_A           35 VVDFHAQW------CGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTD----LAIEYEV--SAVPTVLAMKNGDVV   98 (119)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHH----HHHHTTC--CSSSEEEEEETTEEE
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHH----HHHHcCC--CcccEEEEEeCCcEE
Confidence            45555555      5899988877764    2  58899999988753    5555664  78999988  89754

>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A

Probab=96.10  E-value=0.046  Score=42.31  Aligned_cols=56  Identities=13%  Similarity=0.151  Sum_probs=40.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+++|      |+.|+.+...|+.+     +|.|..+|++.+.+    +.+.+|-  ..+|.+++  +|+.+
T Consensus        50 vv~f~a~w------C~~C~~~~~~l~~l~~~~~~v~~~~v~~~~~~~----~~~~~~v--~~~Pt~~~~~~G~~~  112 (139)
T 3d22_A           50 LANFSARW------CGPSRQIAPYYIELSENYPSLMFLVIDVDELSD----FSASWEI--KATPTFFFLRDGQQV  112 (139)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHH----HHHHTTC--CEESEEEEEETTEEE
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHHCCCCEEEEEeCcccHH----HHHHcCC--CcccEEEEEcCCeEE
Confidence            55566665      58999888877753     68999999988754    4555664  68998754  77654

>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}

Probab=96.09  E-value=0.035  Score=41.17  Aligned_cols=57  Identities=23%  Similarity=0.357  Sum_probs=40.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      ||.|+++|      |+.|+++...|+.       .++.|..+|++.+++    +.+..|-  ..+|.+++  +|+.++
T Consensus        25 ~v~f~a~w------C~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v--~~~Pt~~~~~~G~~~~   90 (112)
T 3d6i_A           25 VLYFHTSW------AEPCKALKQVFEAISNEPSNSNVSFLSIDADENSE----ISELFEI--SAVPYFIIIHKGTILK   90 (112)
T ss_dssp             EEEEECCC--------CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHH----HHHHcCC--CcccEEEEEECCEEEE
Confidence            55566666      4799988877762       368899999988764    4555654  78999866  898764

>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}

Probab=96.07  E-value=0.045  Score=41.66  Aligned_cols=58  Identities=10%  Similarity=0.202  Sum_probs=39.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe---CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI---RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI---~G~~I  198 (277)
                      ||.|+++|      |++|+++...|+.      .+|.+..+|++.|.  ..++.+.+|-  ..+|.+++   +|+.+
T Consensus        30 lv~f~a~w------C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~--~~~~~~~~~v--~~~Pt~~~~~~~G~~~   96 (126)
T 2l57_A           30 IIMFKTDT------CPYCVEMQKELSYVSKEREGKFNIYYARLEEEK--NIDLAYKYDA--NIVPTTVFLDKEGNKF   96 (126)
T ss_dssp             EEEEECSS------CHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSH--HHHHHHHTTC--CSSSEEEEECTTCCEE
T ss_pred             EEEEECCC------CccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCc--hHHHHHHcCC--cceeEEEEECCCCCEE
Confidence            55556665      5899988877765      36888899933332  2356666765  78999987   78754

>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}

Probab=96.07  E-value=0.043  Score=44.38  Aligned_cols=23  Identities=9%  Similarity=-0.003  Sum_probs=18.5

Q ss_pred             CCCcEEEeCCEEEechhHHHHHH
Q 048504          186 VTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       186 ~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      ..+|.++|+|+.+-|+.....|.
T Consensus       143 ~gtPt~~i~g~~~~G~~~~~~l~  165 (175)
T 3gyk_A          143 NGTPSFVVEDALVPGFVEQSQLQ  165 (175)
T ss_dssp             CSSSEEEETTEEECSCCCHHHHH
T ss_pred             ccCCEEEECCEEeeCCCCHHHHH
Confidence            78999999999998876655443

>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}

Probab=96.06  E-value=0.021  Score=42.24  Aligned_cols=56  Identities=16%  Similarity=0.072  Sum_probs=35.9

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+++|      |+.|+.+...|+..     ++.+..+|++.+++    +.+.++-  ..+|.+++  +|+.+
T Consensus        22 lv~f~a~w------C~~C~~~~p~~~~~~~~~~~~~~~~vd~~~~~~----l~~~~~v--~~~Pt~~~~~~G~~~   84 (105)
T 4euy_A           22 LLFIKTEN------CGVCDVMLRKVNYVLENYNYVEKIEILLQDMQE----IAGRYAV--FTGPTVLLFYNGKEI   84 (105)
T ss_dssp             EEEEEESS------CHHHHHHHHHHHHHHHTCTTEEEEEEEECCC---------------CCCCEEEEEETTEEE
T ss_pred             EEEEeCCC------CcchHHHHHHHHHHHHHcCCceEEEEECCCCHH----HHHhcCC--CCCCEEEEEeCCeEE
Confidence            44466666      57999988888762     67888999988864    4444554  68998755  88876

>2yv9_A Chloride intracellular channel EXC-4; chloride ION channel, CLIC, GST fold, metal transport; 1.60A {Caenorhabditis elegans}

Probab=96.05  E-value=0.027  Score=50.46  Aligned_cols=77  Identities=12%  Similarity=0.058  Sum_probs=56.5

Q ss_pred             CCcEEEEEecCC---CCCCCChhHHHHHHHH----HhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          128 EDRIVVYLTSLR---GIRRTFEDCYAVRMIF----RGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       128 ~~kVVLYttSlc---giR~Tc~~C~~Vk~iL----~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      +..+.||.....   .....||+|++|+.+|    +.+||+|+.+.|+....  . +.++...  .+||.+..  +|..|
T Consensus        17 ~~~i~Ly~~~~~~~~~~~~~cP~~~rv~~~L~lL~e~kgi~ye~~~vd~~~~--p-fl~~nP~--GkVPvL~d~~~g~~l   91 (291)
T 2yv9_A           17 KPLLELYVKASGIDARRIGADLFCQEFWMELYALYEIGVARVEVKTVNVNSE--A-FKKNFLG--AQPPIMIEEEKELTY   91 (291)
T ss_dssp             SCEEEEEEEBCSSCTTSBCCCHHHHHHHHHHHHHHHTTSCEEEEEEECTTCH--H-HHHHHTT--CCSCEEEEGGGTEEE
T ss_pred             CCCEEEEEecCCCCcCccCcChHHHHHHHHHHHHHHhcCceeEEEEeCCCCh--h-HHhcCCC--CCCCEEEEcCCCeEE
Confidence            446999987642   1234689999999999    78899999888775421  2 6666644  68999988  89888


Q ss_pred             echhHHHHHHh
Q 048504          199 GNADVLKSMYE  209 (277)
Q Consensus       199 GG~del~~L~E  209 (277)
                      .....+.+..+
T Consensus        92 ~ES~aI~~YL~  102 (291)
T 2yv9_A           92 TDNREIEGRIF  102 (291)
T ss_dssp             CSHHHHHHHHH
T ss_pred             eCHHHHHHHHH
Confidence            87777766443

>4dej_A Glutathione S-transferase related protein; transferase-like protein, transcription regulation; 2.90A {Idiomarina loihiensis}

Probab=96.05  E-value=0.017  Score=49.47  Aligned_cols=70  Identities=16%  Similarity=0.089  Sum_probs=54.7

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCC-CCCcEEEeCCEEEechhHHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKN-VTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~-~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      .++||+...      +++|.+|+.+|+.+||+|+.+.|+.. ....++.++..  . .++|.+..||..|.+...+.+..
T Consensus        12 ~~~Ly~~~~------sp~~~~vr~~L~~~gi~~e~~~v~~~-~~~~~~~~~nP--~~g~vPvL~~~g~~l~eS~aI~~YL   82 (231)
T 4dej_A           12 VMTLYSGKD------DLKSHQVRLVLAEKGVGVEITYVTDE-STPEDLLQLNP--YPEAKPTLVDRELVLYNAQIIMEYL   82 (231)
T ss_dssp             SCEEEECSS------CHHHHHHHHHHHHHTCBCEEEECCSS-CCCHHHHHHCC--SSSCCSEEEETTEEEESHHHHHHHH
T ss_pred             eEEEEcCCC------ChHHHHHHHHHHHcCCCcEEEEcCcc-cCCHHHHHhCC--CCCCCCEEEECCEEEEcHHHHHHHH
Confidence            489999875      48999999999999999999888754 22345556542  3 47999999999998887776643

>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*

Probab=96.05  E-value=0.051  Score=41.26  Aligned_cols=57  Identities=18%  Similarity=0.261  Sum_probs=41.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      ||.|+++|      |+.|+++...|+.+     +|.|..+|++.+++    +.+.+|-  ..+|.+++  +|+.+.
T Consensus        35 lv~F~a~w------C~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~----l~~~~~v--~~~Pt~~~~~~G~~~~   98 (116)
T 3qfa_C           35 VVDFSATW------CGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQD----VASECEV--KSMPTFQFFKKGQKVG   98 (116)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHTTCTTSEEEEEETTTTHH----HHHHTTC--CSSSEEEEESSSSEEE
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH----HHHHcCC--ccccEEEEEeCCeEEE
Confidence            55566666      57999988888762     58889999988754    4555654  78999876  776553

>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B

Probab=96.05  E-value=0.072  Score=39.87  Aligned_cols=57  Identities=14%  Similarity=0.191  Sum_probs=41.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-----CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-----FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-----~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      ||.|+++|      |+.|+++...|+.     .++.|..+|++.+++    +.+.++-  ..+|.+++  +|+.+.
T Consensus        28 lv~f~a~w------C~~C~~~~p~l~~l~~~~~~~~~~~vd~~~~~~----l~~~~~v--~~~Pt~~~~~~G~~~~   91 (109)
T 3f3q_A           28 VVDFYATW------CGPCKMIAPMIEKFSEQYPQADFYKLDVDELGD----VAQKNEV--SAMPTLLLFKNGKEVA   91 (109)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEECCc------CHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHH----HHHHcCC--CccCEEEEEECCEEEE
Confidence            44466665      5899998888876     368899999988754    4555654  78999866  887665

>1nhy_A EF-1-gamma 1, elongation factor 1-gamma 1; protein synthesis, GST-like, translation; 3.00A {Saccharomyces cerevisiae} SCOP: a.45.1.1 c.47.1.5

Probab=96.03  E-value=0.0095  Score=49.58  Aligned_cols=67  Identities=12%  Similarity=0.128  Sum_probs=52.6

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe-CCEEEechhHHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI-RGKHVGNADVLKSMY  208 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI-~G~~IGG~del~~L~  208 (277)
                      +++||+ ..      +++|.+|+.+|+..||+|+.+.++   ....++.++...  .++|.+.. ||..|.+...+.+..
T Consensus         3 ~~~Ly~-~~------~~~~~~v~~~l~~~gi~~e~~~~~---~~~~~~~~~nP~--g~vP~L~~~~g~~l~eS~aI~~yL   70 (219)
T 1nhy_A            3 QGTLYA-NF------RIRTWVPRGLVKALKLDVKVVTPD---AAAEQFARDFPL--KKVPAFVGPKGYKLTEAMAINYYL   70 (219)
T ss_dssp             TCEEEC-CS------SHHHHHHHHHHHHHTCCCEEECGG---GCHHHHHHHCTT--CCSSEEECGGGCEEESHHHHHHHH
T ss_pred             ceEEec-CC------CCChHHHHHHHHHcCCCceeeccc---CCCHHHHHHCCC--CCCCeEEcCCCCEEecHHHHHHHH
Confidence            578998 43      589999999999999999999887   233556666543  67999998 888888887776643

>3ik7_A Glutathione S-transferase A4; human GST A4-4, enzyme, cytoplasm, polymorphism; HET: BOB; 1.97A {Homo sapiens} PDB: 1gum_A 1gul_A*

Probab=96.03  E-value=0.026  Score=47.10  Aligned_cols=70  Identities=17%  Similarity=0.081  Sum_probs=53.7

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhC---CCCCCCcEEEeCCEEEechhHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG---GKNVTLPQVFIRGKHVGNADVLK  205 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG---~~~~tvPqVFI~G~~IGG~del~  205 (277)
                      ++++||+...+      ++|.+|+.+|+..||+|+.+.|+..+    ++.++..   ....++|.+..||..|.....+.
T Consensus         3 ~~~~Ly~~~~s------~~~~~v~~~L~~~gi~ye~~~v~~~~----~~~~~~p~~~~p~g~vP~L~~~g~~l~eS~aI~   72 (222)
T 3ik7_A            3 ARPKLHYPNGR------GRMESVRWVLAAAGVEFDEEFLETKE----QLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSIL   72 (222)
T ss_dssp             CSCEEEECSSC------TTTHHHHHHHHHTTCCCEEEECCSHH----HHHHHHHTTCSTTSCSCEEEETTEEEESHHHHH
T ss_pred             CCcEEEEeCCC------cchHHHHHHHHHcCCCeeEEeeCcHH----HHHHhhhcCCCCCCCCCEEEECCEEeehHHHHH
Confidence            36889998865      69999999999999999999997643    3333331   11257999999999998888777


Q ss_pred             HHH
Q 048504          206 SMY  208 (277)
Q Consensus       206 ~L~  208 (277)
                      +..
T Consensus        73 ~yL   75 (222)
T 3ik7_A           73 HYI   75 (222)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            643

>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A

Probab=96.02  E-value=0.032  Score=41.95  Aligned_cols=58  Identities=16%  Similarity=0.312  Sum_probs=42.2

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhC----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGF----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      -||.|+++|      |+.|+++...|+..    ++.+..+|++.+.+    +.+.+|-  ..+|.+++  +|+.++
T Consensus        36 ~vv~f~a~w------C~~C~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v--~~~Pt~~~~~~G~~~~   99 (117)
T 2xc2_A           36 VVVDFFATW------CGPCKTIAPLFKELSEKYDAIFVKVDVDKLEE----TARKYNI--SAMPTFIAIKNGEKVG   99 (117)
T ss_dssp             EEEEEECTT------CHHHHHHHHHHHHHHTTSSSEEEEEETTTSHH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEEECCC------CHhHHHHhHHHHHHHHHcCcEEEEEECCccHH----HHHHcCC--CccceEEEEeCCcEEE
Confidence            355566665      58999888877753    78899999987754    4555654  78999877  887653

>3r2q_A Uncharacterized GST-like protein YIBF; transferase, glutathione; HET: GSH; 1.05A {Escherichia coli}

Probab=95.98  E-value=0.0041  Score=50.95  Aligned_cols=68  Identities=3%  Similarity=-0.118  Sum_probs=50.0

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE-eCCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF-IRGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF-I~G~~IGG~del~~L  207 (277)
                      +.||+...      +++|.+|+.+|+.+||+|+.+.|+.. ....++.++...  .++|.+. .||..|.....+.+.
T Consensus         1 m~Ly~~~~------sp~~~~v~~~l~~~gi~~e~~~v~~~-~~~~~~~~~~P~--g~vP~L~~~~g~~l~eS~aI~~y   69 (202)
T 3r2q_A            1 MKLVGSYT------SPFVRKLSILLLEKGITFEFINELPY-NADNGVAQFNPL--GKVPVLVTEEGECWFDSPIIAEY   69 (202)
T ss_dssp             CEEEECSS------CHHHHHHHHHHHHTTCCCEEEECCTT-SSSCSCTTTCTT--CCSCEEECTTSCEECSHHHHHHH
T ss_pred             CEEEeCCC------CcHHHHHHHHHHHcCCCCeEEEecCC-CCcHHHHHhCCC--CCcCeEEecCCcEEecHHHHHHH
Confidence            46888875      48999999999999999999888753 111233344333  6899998 688888877776654

>3gtu_B Glutathione S-transferase; conjugation, detoxification, cytosolic, heterodimer; 2.80A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5

Probab=95.97  E-value=0.034  Score=46.67  Aligned_cols=75  Identities=12%  Similarity=0.123  Sum_probs=53.1

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--H--HHHHHHHH--hCCCCCCCcEEEeCCEEEech
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--A--YKKELQCV--FGGKNVTLPQVFIRGKHVGNA  201 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~--~reELke~--lG~~~~tvPqVFI~G~~IGG~  201 (277)
                      ..+++||+...+      ++|.+|+.+|+.+||+|+.+.|+...  +  .-+.+...  .|....++|.+..||..|...
T Consensus         3 ~~~~~Ly~~~~s------~~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~d~g~~l~eS   76 (224)
T 3gtu_B            3 ESSMVLGYWDIR------GLAHAIRLLLEFTDTSYEEKRYTCGEAPDYDRSQWLDVKFKLDLDFPNLPYLLDGKNKITQS   76 (224)
T ss_dssp             CCCEEEEEESSS------GGGHHHHHHHHHTTCCEEEEEECCCCSSSCCCHHHHHHHTTSCCSSCCSSEEEETTEEEESH
T ss_pred             CCCcEEEEeCCC------cchHHHHHHHHHcCCCceEEEeecCCcccccHHHHHhhhhhcCCCCCCCCEEEECCEEeecH
Confidence            356889888764      79999999999999999988886431  0  11223333  222336799998888888888


Q ss_pred             hHHHHHH
Q 048504          202 DVLKSMY  208 (277)
Q Consensus       202 del~~L~  208 (277)
                      ..+.+..
T Consensus        77 ~aI~~yL   83 (224)
T 3gtu_B           77 NAILRYI   83 (224)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7777643

>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}

Probab=95.96  E-value=0.04  Score=39.79  Aligned_cols=57  Identities=16%  Similarity=0.309  Sum_probs=41.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      |+.|++++      |+.|+.+...|+..     ++.+..+|++.+++    +.+.+|-  ..+|.+++  +|+.+.
T Consensus        23 ~v~f~~~~------C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~----~~~~~~v--~~~Pt~~~~~~g~~~~   86 (104)
T 2vim_A           23 VVDFFAQW------CGPCRNIAPKVEALAKEIPEVEFAKVDVDQNEE----AAAKYSV--TAMPTFVFIKDGKEVD   86 (104)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEECCC------CHHHHHhhHHHHHHHHHCCCCEEEEEeccCCHH----HHHHcCC--ccccEEEEEeCCcEEE
Confidence            44466665      58999888877752     78999999988754    4455654  68999877  887653

>4ags_A Thiol-dependent reductase 1; transferase, leishmaniasis, DE-gluathionylation; HET: MSE GSH; 2.30A {Leishmania infantum}

Probab=95.94  E-value=0.01  Score=55.62  Aligned_cols=75  Identities=13%  Similarity=0.148  Sum_probs=56.5

Q ss_pred             CCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe-CCEEEechhH
Q 048504          125 PGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI-RGKHVGNADV  203 (277)
Q Consensus       125 ~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI-~G~~IGG~de  203 (277)
                      +..+.+++||....      ||+|.+++.+|+.+||+|+.+.|+.. ...+++.+....  .++|.|.+ ||..|.....
T Consensus       247 ~~~~~~~~L~~~~~------sp~~~rv~~~L~~~gi~y~~~~v~~~-~~~~~~~~~~P~--g~vP~L~~~~g~~l~eS~a  317 (471)
T 4ags_A          247 MGANGGHVLYSNLF------CPFVDRARLASELRKFQMHIVEVPLH-PQPEWYKYINPR--DTVPALFTPSGEAVHESQL  317 (471)
T ss_dssp             GGGTTSCEEEECTT------CHHHHHHHHHHHHTTCCCEEEECCCS-SCCTTHHHHCTT--CCSCEEECTTSCEEESHHH
T ss_pred             CCCCCcEEEEecCC------CchHHHHHHHHHHCCCCcEEEEecCC-cCcHHHHHhCCC--CCcCeEEeCCCcEeecHHH
Confidence            34567899999976      48999999999999999999888754 222344555543  68999986 8888877766


Q ss_pred             HHHHH
Q 048504          204 LKSMY  208 (277)
Q Consensus       204 l~~L~  208 (277)
                      +.+..
T Consensus       318 I~~yL  322 (471)
T 4ags_A          318 IVQYI  322 (471)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66543

>2wb9_A Glutathione transferase sigma class; thioredoxin fold; HET: GSH; 1.59A {Fasciola hepatica} PDB: 2wdu_A*

Probab=95.93  E-value=0.017  Score=47.69  Aligned_cols=70  Identities=11%  Similarity=0.250  Sum_probs=53.8

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCC-----EEEechhH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRG-----KHVGNADV  203 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G-----~~IGG~de  203 (277)
                      ..++||....+      ++|.+|+.+|+..||+|+.+.|+.+  ...++.+....  .++|.+.++|     ..|.+...
T Consensus         4 ~~~~Ly~~~~s------~~~~~v~~~L~~~gi~~e~~~v~~~--~~~~~~~~~P~--g~vP~L~~~~~~g~~~~l~eS~a   73 (211)
T 2wb9_A            4 QHFKLWYFQFR------GRAEPIRLLLTCAGVKFEDYQFTMD--QWPTIKPTLPG--GRVPLLDVTGPDGKLRRYQESMA   73 (211)
T ss_dssp             CEEEEEEESSC------GGGHHHHHHHHHTTCCCEEEEECTT--THHHHGGGSGG--GCSCEEEEECTTSCEEEEESHHH
T ss_pred             CceEEEEeCCC------CchHHHHHHHHHcCCCceEEEechh--hHHHhCcCCCC--CCCCEEEECCCCccceeecCHHH
Confidence            35889998754      7999999999999999999888743  22555555433  5799999988     88888877


Q ss_pred             HHHHH
Q 048504          204 LKSMY  208 (277)
Q Consensus       204 l~~L~  208 (277)
                      +.+..
T Consensus        74 I~~yL   78 (211)
T 2wb9_A           74 IARLL   78 (211)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77643

>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A

Probab=95.93  E-value=0.058  Score=39.25  Aligned_cols=56  Identities=18%  Similarity=0.395  Sum_probs=40.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      |+.|+++|      |++|+.+...|+.    +  .+.+..+|++.+++    +.+.+|-  ..+|.+++  +|+.+
T Consensus        21 ~v~f~~~~------C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~----~~~~~~v--~~~Pt~~~~~~G~~~   84 (105)
T 1nsw_A           21 LVDFWAAW------CGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPE----TTSQFGI--MSIPTLILFKGGRPV   84 (105)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEE
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHH----HHHHcCC--ccccEEEEEeCCeEE
Confidence            55556655      5899988877765    2  38899999988754    4555664  68999987  88854

>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1

Probab=95.84  E-value=0.031  Score=41.19  Aligned_cols=56  Identities=23%  Similarity=0.271  Sum_probs=39.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+++|      |++|..+...|+..     +|.|..+|++.++++    .+.+|-  ..+|.+++  +|+.+
T Consensus        30 vv~f~~~~------C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~----~~~~~v--~~~Pt~~~~~~G~~~   92 (113)
T 1ti3_A           30 VVDFTASW------CPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAV----AEEWNV--EAMPTFIFLKDGKLV   92 (113)
T ss_dssp             EEEEECSS------CHHHHHHHHHHHHHHHHCSSEEEEEEETTTCHHH----HHHHHC--SSTTEEEEEETTEEE
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHhCCCcEEEEEEccccHHH----HHhCCC--CcccEEEEEeCCEEE
Confidence            44455555      58999888777653     688899999887644    444544  67999877  88764

>1tu7_A Glutathione S-transferase 2; HET: GSH; 1.50A {Onchocerca volvulus} SCOP: a.45.1.1 c.47.1.5 PDB: 1tu8_A*

Probab=95.84  E-value=0.012  Score=48.79  Aligned_cols=69  Identities=10%  Similarity=0.130  Sum_probs=52.4

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      +++||+...+      ++|.+|+.+|+..||+|+.+.++....  .++.+....  .++|.+..||..|.+...+.+..
T Consensus         2 ~~~Ly~~~~s------~~~~~v~~~L~~~gi~~e~~~v~~~~~--~~~~~~nP~--g~vP~L~~~g~~l~eS~aI~~yL   70 (208)
T 1tu7_A            2 SYKLTYFSIR------GLAEPIRLFLVDQDIKFIDDRIAKDDF--SSIKSQFQF--GQLPCLYDGDQQIVQSGAILRHL   70 (208)
T ss_dssp             CEEEEEESSS------GGGHHHHHHHHHTTCCCEEEEECGGGS--TTTGGGSTT--SCSCEEEETTEEEESHHHHHHHH
T ss_pred             CcEEEEcCCC------cchHHHHHHHHHcCCCceEEEEcHHHH--HHhccCCCC--CCCCEEEECCEEEEcHHHHHHHH
Confidence            4789988754      799999999999999999888764321  234444433  57999999999998887777643

>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A

Probab=95.83  E-value=0.082  Score=38.25  Aligned_cols=57  Identities=12%  Similarity=0.327  Sum_probs=40.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      |+.|+++|      |++|+.+...|+..      .+.+..+|++.+++    +.+.++-  ..+|.+++  +|+.++
T Consensus        23 lv~f~~~~------C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~v--~~~Pt~~~~~~G~~~~   87 (106)
T 3die_A           23 LVDFWATA------CGPCKMIAPVLEELAADYEGKADILKLDVDENPS----TAAKYEV--MSIPTLIVFKDGQPVD   87 (106)
T ss_dssp             EEEEECSB------CHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH----HHHHTTC--CSBSEEEEEETTEEEE
T ss_pred             EEEEECCC------CHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHH----HHHhCCC--cccCEEEEEeCCeEEE
Confidence            44555555      68999988877652      38899999988864    4455654  68999866  887554

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=95.79  E-value=0.006  Score=44.88  Aligned_cols=49  Identities=27%  Similarity=0.596  Sum_probs=35.5

Q ss_pred             CCCCCCCccce------EeCCCCCCcceeeeCCCC--cceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVRF------VPCGNCSGSRKVFDEADG--VPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~rf------VpC~~C~GS~Kv~~~~~~--~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+.      .+|+.|+|+-+++.....  ....|+.|+-.|.+   +|+.|.
T Consensus        12 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~   71 (79)
T 1exk_A           12 EECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCH   71 (79)
T ss_dssp             EECGGGTTTSBCSSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECSSBCGGGT
T ss_pred             eECCCCcccccCCCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEECCCcCCCCC
Confidence            46777777663      679999999876542211  13589999999988   898885

>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}

Probab=95.78  E-value=0.046  Score=43.94  Aligned_cols=66  Identities=18%  Similarity=0.045  Sum_probs=52.5

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhC----CCeEEEEECCCCHHHHHHHHHHhCCCCC-CCcEEE--eCCEEEec
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGF----RVWVDERDVSMDSAYKKELQCVFGGKNV-TLPQVF--IRGKHVGN  200 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~----gV~y~ErDVs~d~~~reELke~lG~~~~-tvPqVF--I~G~~IGG  200 (277)
                      ..+|+|+..+.     +|+-|+.+...|+.+    .++|..+||..++.+-.++.+.+|-  . ..||++  -||+-|..
T Consensus        24 ~~~vvi~khat-----wCgpc~~~~~~~e~~~~~~~v~~~~vdVde~r~~Sn~IA~~~~V--~h~sPq~il~k~G~~v~~   96 (112)
T 3iv4_A           24 NKYVFVLKHSE-----TCPISANAYDQFNKFLYERDMDGYYLIVQQERDLSDYIAKKTNV--KHESPQAFYFVNGEMVWN   96 (112)
T ss_dssp             CSEEEEEEECT-----TCHHHHHHHHHHHHHHHHHTCCEEEEEGGGGHHHHHHHHHHHTC--CCCSSEEEEEETTEEEEE
T ss_pred             CCCEEEEEECC-----cCHhHHHHHHHHHHHhccCCceEEEEEeecCchhhHHHHHHhCC--ccCCCeEEEEECCEEEEE
Confidence            55677777663     478999988888765    7999999999888777789999986  4 589985  49988765

>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1

Probab=95.76  E-value=0.052  Score=39.99  Aligned_cols=57  Identities=12%  Similarity=0.111  Sum_probs=41.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      |+.|+++|      |+.|+++...|+..     ++.|..+|++.+++    +.+.+|-  ..+|.+++  +|+.++
T Consensus        25 ~v~f~a~w------C~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v--~~~Pt~~~~~~G~~~~   88 (107)
T 1gh2_A           25 VVKFTMRG------CGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQG----TAATNNI--SATPTFQFFRNKVRID   88 (107)
T ss_dssp             EEEEECSS------CHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEECCC------ChhhHHHHHHHHHHHHHCCCcEEEEEECccCHH----HHHhcCC--CcccEEEEEECCeEEE
Confidence            55566666      58999988888763     68899999988754    4555664  68998754  887554

>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0

Probab=95.76  E-value=0.081  Score=38.36  Aligned_cols=57  Identities=12%  Similarity=0.317  Sum_probs=39.9

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE--eCCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF--IRGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF--I~G~~IG  199 (277)
                      ||.|+++|      |++|+.+...|+.    +  .+.+..+|++.+++    +.+.++-  ..+|.++  -+|+.++
T Consensus        25 lv~f~~~~------C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~i--~~~Pt~~~~~~g~~~~   89 (109)
T 3tco_A           25 LVDCWAEW------CAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQK----IADKYSV--LNIPTTLIFVNGQLVD   89 (109)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEECCC------CHHHHhhhHHHHHHHHHhCCCceEEEEccccCHH----HHHhcCc--ccCCEEEEEcCCcEEE
Confidence            45566655      5899988877764    2  48899999988764    4455654  7899854  4887553

>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A

Probab=95.75  E-value=0.062  Score=38.92  Aligned_cols=57  Identities=14%  Similarity=0.202  Sum_probs=40.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      |+.|++++      |++|+++...|+.      .++.+..+|++.+++    +.+.+|-  ..+|.+++  +|+.+.
T Consensus        24 vv~f~~~~------C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~v--~~~Pt~~~~~~G~~~~   88 (106)
T 1xwb_A           24 VLDFFATW------CGPCKMISPKLVELSTQFADNVVVLKVDVDECED----IAMEYNI--SSMPTFVFLKNGVKVE   88 (106)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEECCc------CHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHH----HHHHcCC--CcccEEEEEcCCcEEE
Confidence            45555555      6899988877765      368888999987754    4555654  68999877  887654

>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}

Probab=95.73  E-value=0.059  Score=42.25  Aligned_cols=57  Identities=14%  Similarity=0.261  Sum_probs=41.9

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      ||.|+++|      |+.|+++...|+.+      .|.|..+|++.+++    |.+.++-  ..+|.+++  +|+.+.
T Consensus        28 lv~F~a~w------C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~----l~~~~~v--~~~Pt~~~~~~G~~~~   92 (140)
T 3hz4_A           28 VVMFYSPA------CPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPW----TAEKYGV--QGTPTFKFFCHGRPVW   92 (140)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHH----HHHHHTC--CEESEEEEEETTEEEE
T ss_pred             EEEEECCC------ChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHh----HHHHCCC--CcCCEEEEEeCCcEEE
Confidence            55566666      58999988887653      38899999988754    4555654  78999977  887654

>4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus}

Probab=95.71  E-value=0.0063  Score=51.75  Aligned_cols=68  Identities=13%  Similarity=0.096  Sum_probs=49.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe-CCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI-RGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI-~G~~IGG~del~~L  207 (277)
                      ..||.+..      +|+|++|+.+|..+||+|+.+.|+.... .+++.++...  .+||.+.+ ||..|.....+.+.
T Consensus        23 MKLy~~~~------SP~~~rVr~~L~e~gi~~e~~~v~~~~~-~~~~~~~nP~--gkVPvL~~~dG~~l~ES~aI~~Y   91 (225)
T 4glt_A           23 MKLLYSNT------SPYARKVRVVAAEKRIDVDMVLVVLADP-ECPVADHNPL--GKIPVLILPDGESLYDSRVIVEY   91 (225)
T ss_dssp             CEEEECSS------CHHHHHHHHHHHHHTCCCEEEECCTTCS-SSCGGGTCTT--CCSCEEECTTSCEECSHHHHHHH
T ss_pred             ceEecCCC------CHHHHHHHHHHHHhCCCCEEEEeCCCCC-CHHHHHhCCC--CCCCEEEeCCCCEEeehHHHHHH
Confidence            46899875      5999999999999999999888864311 1234444432  57999987 67888776666554

>4ikh_A Glutathione S-transferase; enzyme function initiative, EFI, structural genomics; HET: GSH; 2.10A {Pseudomonas protegens}

Probab=95.69  E-value=0.025  Score=48.02  Aligned_cols=73  Identities=11%  Similarity=0.144  Sum_probs=54.7

Q ss_pred             CCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEe----CC--EEE
Q 048504          127 TEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFI----RG--KHV  198 (277)
Q Consensus       127 ~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI----~G--~~I  198 (277)
                      .+..++||... +      ++|.+|+.+|+..||+|+.+.|+...  ....++.++...  .++|.|.+    ||  ..|
T Consensus        19 ~~~~~~Ly~~~-~------~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~~~dg~dG~~~~l   89 (244)
T 4ikh_A           19 FPEWIQLYSLP-T------PNGVKVSIMLEEIGLPYEAHRVSFETQDQMTPEFLSVSPN--NKIPAILDPHGPGDQPLAL   89 (244)
T ss_dssp             STTSEEEEECS-S------HHHHHHHHHHHHHTCCEEEEECCTTTTTTSSHHHHTTCTT--SCSCEEEETTCGGGCCEEE
T ss_pred             CCCeeEEEeCC-C------CChHHHHHHHHHcCCCceEEEecCCCCCcCChHHHhcCCC--CCCCEEEecCCCCCCceeE
Confidence            35689999986 4      89999999999999999988887532  234456655543  68999988    35  678


Q ss_pred             echhHHHHHH
Q 048504          199 GNADVLKSMY  208 (277)
Q Consensus       199 GG~del~~L~  208 (277)
                      .....+.+..
T Consensus        90 ~eS~aI~~yL   99 (244)
T 4ikh_A           90 FESGAILIYL   99 (244)
T ss_dssp             ESHHHHHHHH
T ss_pred             EcHHHHHHHH
Confidence            8877776643

>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}

Probab=95.69  E-value=0.12  Score=40.54  Aligned_cols=57  Identities=18%  Similarity=0.345  Sum_probs=41.0

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      ||.|+++|      |+.|+++...|+.      ..+.|..+|++.+++    +.+.++-  ..+|.+++  +|+.+.
T Consensus        59 lv~F~a~w------C~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~----l~~~~~v--~~~Pt~~~~~~G~~~~  123 (148)
T 3p2a_A           59 VIDFWAPW------CGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPA----LSTRFRI--RSIPTIMLYRNGKMID  123 (148)
T ss_dssp             EEEEECSS------CHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHH----HHHHCCC--CccCEEEEEECCeEEE
Confidence            45566666      5899988877765      258899999988764    4555654  78998865  887653

>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1

Probab=95.68  E-value=0.053  Score=37.54  Aligned_cols=55  Identities=15%  Similarity=0.165  Sum_probs=37.0

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHH----hCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFR----GFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~----~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IG  199 (277)
                      |.+|+ +||      +.|+.+...|+    .++..+...+|+ +.    ++.+..|-  ..+|.++++|+.+.
T Consensus         4 v~f~a-~wC------~~C~~~~~~l~~~~~~~~~~~~~~~v~-~~----~~~~~~~v--~~~Pt~~~~G~~~~   62 (77)
T 1ilo_A            4 IQIYG-TGC------ANCQMLEKNAREAVKELGIDAEFEKIK-EM----DQILEAGL--TALPGLAVDGELKI   62 (77)
T ss_dssp             EEEEC-SSS------STTHHHHHHHHHHHHHTTCCEEEEEEC-SH----HHHHHHTC--SSSSCEEETTEEEE
T ss_pred             EEEEc-CCC------hhHHHHHHHHHHHHHHcCCceEEEEec-CH----HHHHHCCC--CcCCEEEECCEEEE
Confidence            55555 575      69998777654    456566665655 43    45556665  78999999998763

>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}

Probab=95.67  E-value=0.11  Score=39.02  Aligned_cols=51  Identities=16%  Similarity=0.103  Sum_probs=37.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI  193 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI  193 (277)
                      ||.|+++|      |+.|+.+...|+.      .+|.|..+|++.+++    +.+.++-  ..+|.+++
T Consensus        25 lv~f~a~~------C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v--~~~Pt~~~   81 (122)
T 3aps_A           25 VVDFYAPW------CGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQ----TCQKAGI--KAYPSVKL   81 (122)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHH----HHHHTTC--CSSSEEEE
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHH----HHHHcCC--CccceEEE
Confidence            55566665      5899998888875      268999999998754    4555654  68999865

>4exj_A Uncharacterized protein; transferase-like protein, transcription regulation, transfer structural genomics; 1.64A {Lodderomyces elongisporus nrrl yb-4239}

Probab=95.66  E-value=0.039  Score=46.97  Aligned_cols=67  Identities=4%  Similarity=-0.002  Sum_probs=51.5

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEe-CCEEEechhHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFI-RGKHVGNADVLKSM  207 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI-~G~~IGG~del~~L  207 (277)
                      +||+.. +      ++|.+|+.+|+..||+|+.+.|+..  .....++.++...  .++|.+.. ||..|.....+.+.
T Consensus         5 lLy~~~-s------~~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~P~--g~vPvL~~~dg~~l~eS~aI~~y   74 (238)
T 4exj_A            5 ILYTGP-T------GNGRKPLVLGKLLNAPIKVHMFHWPTKDIQEDWYLKLNPA--GIVPTLVDDKGTPITESNNILLY   74 (238)
T ss_dssp             EEEECS-S------TTTHHHHHHHHHTTCSEEEEECC-CCSGGGSHHHHHHCTT--CCSCEEECTTSCEEESHHHHHHH
T ss_pred             eEeeCC-C------CchHHHHHHHHHcCCCceEEEecccCCccCCHHHHhhCCC--CCCCEEEeCCCcEEeeHHHHHHH
Confidence            388876 4      7999999999999999998888753  3344566777644  68999988 46888887777664

>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1

Probab=95.65  E-value=0.056  Score=42.05  Aligned_cols=57  Identities=18%  Similarity=0.255  Sum_probs=41.9

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-----CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-----FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-----~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      ||.|+++|      |+.|+++...|+.     .+|.|..+|++.+++    |.+.++-  ..+|.+++  +|+.++
T Consensus        41 vv~F~a~w------C~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~----l~~~~~v--~~~Pt~~i~~~G~~~~  104 (125)
T 1r26_A           41 VAWFTAVW------CGPCKTIERPMEKIAYEFPTVKFAKVDADNNSE----IVSKCRV--LQLPTFIIARSGKMLG  104 (125)
T ss_dssp             EEEEECTT------CHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEECCc------CHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHH----HHHHcCC--CcccEEEEEeCCeEEE
Confidence            55566665      5899988877765     269999999988754    4555654  78999977  898643

>1m0u_A GST2 gene product; flight muscle protein, sigma, transferase; HET: GSH; 1.75A {Drosophila melanogaster} SCOP: a.45.1.1 c.47.1.5

Probab=95.61  E-value=0.024  Score=49.58  Aligned_cols=71  Identities=13%  Similarity=0.143  Sum_probs=55.3

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +.++.||+...+      ++|.+|+.+|+.+||+|+.+.++.+.  ..+++++...  .+||.+..||..|.....+.+.
T Consensus        47 m~~~~Ly~~~~s------~~~~~vr~~L~~~gi~ye~~~v~~~~--~~e~~~~nP~--gkVPvL~~~g~~l~ES~aI~~Y  116 (249)
T 1m0u_A           47 KHSYTLFYFNVK------ALAEPLRYLFAYGNQEYEDVRVTRDE--WPALKPTMPM--GQMPVLEVDGKRVHQSISMARF  116 (249)
T ss_dssp             CCCEEEEEESSS------GGGHHHHHHHHHHTCCCEEEEECTTT--HHHHGGGSGG--GCSCEEEETTEEEECHHHHHHH
T ss_pred             CCCeEEEEcCCc------ccHHHHHHHHHHcCCCcEEEEeCHHH--HHHHhhcCCC--CCCCEEEECCEEEecHHHHHHH
Confidence            456899998754      79999999999999999998887532  3455554433  5799999999999888777764


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus       117 L  117 (249)
T 1m0u_A          117 L  117 (249)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A

Probab=95.59  E-value=0.1  Score=38.85  Aligned_cols=57  Identities=19%  Similarity=0.322  Sum_probs=41.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      ||.|++++      |+.|+.+...|+.    +  ++.|..+|++.+++    +.+.++-  ..+|.+++  +|+.+.
T Consensus        34 lv~f~~~~------C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~i--~~~Pt~~~~~~g~~~~   98 (121)
T 2i1u_A           34 LVDFWATW------CGPCKMVAPVLEEIATERATDLTVAKLDVDTNPE----TARNFQV--VSIPTLILFKDGQPVK   98 (121)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHH----HHHhcCC--CcCCEEEEEECCEEEE
Confidence            55555555      6899998887765    2  58899999988754    4455654  68999977  887653

>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1

Probab=95.54  E-value=0.096  Score=39.55  Aligned_cols=58  Identities=19%  Similarity=0.224  Sum_probs=41.5

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh-----CCCeEEEEECC-CCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG-----FRVWVDERDVS-MDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~-----~gV~y~ErDVs-~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      -||.|+++|      |+.|++....|+.     .++.+..+|++ .+.    ++.+..|-  ..+|.+++  +|+.++
T Consensus        40 ~vv~f~a~w------C~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~----~~~~~~~v--~~~Pt~~~~~~G~~~~  105 (124)
T 1faa_A           40 VVLDMFTQW------CGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENK----TLAKELGI--RVVPTFKILKENSVVG  105 (124)
T ss_dssp             EEEEEECTT------CHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTH----HHHHHHCC--SSSSEEEEEETTEEEE
T ss_pred             EEEEEECCc------CHhHHHHhHHHHHHHHHCCCCEEEEEecCcchH----HHHHHcCC--CeeeEEEEEeCCcEEE
Confidence            355566665      5899988888865     26889999997 443    45556665  78999877  888753

>3cbu_A Probable GST-related protein; thioredoxin fold, GST C-terminal domain-like fold, structura genomics, joint center for structural genomics; 2.05A {Ralstonia eutropha}

Probab=95.50  E-value=0.044  Score=45.20  Aligned_cols=66  Identities=8%  Similarity=0.012  Sum_probs=49.9

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      ++||+...      +++|.+|+.+|+..||+|+.+.|+.. ....++   ..  ..++|.+.++|..|.+...+.+..
T Consensus         3 ~~Ly~~~~------s~~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~---~P--~g~vP~L~~~~~~l~eS~aI~~yL   68 (214)
T 3cbu_A            3 LKLCGFAA------SNYYNKVKLALLEKNVPFEEVLAWIG-ETDTTA---TP--AGKVPYMITESGSLCESEVINEYL   68 (214)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHTCCEEEEECCTT-SSCTTT---ST--TCCSCEEEETTEEECSHHHHHHHH
T ss_pred             EEEecCCC------CcHhHHHHHHHHhCCCCCEEEecCcc-cCCccc---CC--CCCCCEEEECCeeeecHHHHHHHH
Confidence            78998875      48999999999999999999888741 111122   22  367999999999888877776643

>2x64_A Glutathione-S-transferase; detoxification enzyme; HET: GSH; 2.30A {Xylella fastidiosa}

Probab=95.45  E-value=0.028  Score=46.27  Aligned_cols=70  Identities=10%  Similarity=0.047  Sum_probs=52.0

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      .+.||+...       +.|.+|+.+|+..||+|+.+.|+.......++.++...  .++|.+..||..|.+...+.+..
T Consensus         2 ~~~Ly~~~~-------s~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~P~--g~vP~L~~~g~~l~eS~aI~~yL   71 (207)
T 2x64_A            2 HMKLYIMPG-------ACSLADHILLRWSGSSFDLQFLDHQSMKAPEYLALNPS--GAVPALQVGDWVLTQNAAILNYI   71 (207)
T ss_dssp             CEEEEECTT-------STTHHHHHHHHHHTCCEEEEECCTTTTSSHHHHTTCTT--CCSCEEEETTEEECCHHHHHHHH
T ss_pred             eEEEEcCCC-------CcHHHHHHHHHHcCCCcceEEecccccCChhHHhcCCC--CcCCeEeECCEEEeeHHHHHHHH
Confidence            478898653       35899999999999999998887542122455555433  68999999999998887777643

>3tou_A Glutathione S-transferase protein; GSH binding site, GSH; HET: GSH; 1.75A {Ralstonia solanacearum} PDB: 3tot_A*

Probab=95.45  E-value=0.013  Score=49.43  Aligned_cols=69  Identities=9%  Similarity=-0.005  Sum_probs=50.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe-CCEEEechhHHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI-RGKHVGNADVLKSMY  208 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI-~G~~IGG~del~~L~  208 (277)
                      ++||+...      +++|.+|+.+|+.+||+|+.+.|+.... .+++.++...  .++|.+.+ ||..|.+...+.+..
T Consensus         3 ~~Ly~~~~------sp~~~~vr~~L~~~gi~ye~~~v~~~~~-~~~~~~~nP~--g~vPvL~~~~g~~l~eS~aI~~yL   72 (226)
T 3tou_A            3 MKLIGSHA------SPYTRKVRVVLAEKKIDYQFVLEDVWNA-DTQIHQFNPL--GKVPCLVMDDGGALFDSRVIAEYA   72 (226)
T ss_dssp             CEEEECSS------CHHHHHHHHHHHHTTCCCEEEECCTTST-TCCGGGTCTT--CCSCEEECTTSCEECSHHHHHHHH
T ss_pred             EEEecCCC------CchHHHHHHHHHHcCCCcEEEecCccCC-cHHHHHhCCC--CCCCEEEeCCCCEeccHHHHHHHH
Confidence            57898875      4899999999999999999988864321 1123334333  68999997 778887777766543

>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A

Probab=95.43  E-value=0.14  Score=38.14  Aligned_cols=59  Identities=12%  Similarity=0.099  Sum_probs=37.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHH-------------------HHHHhCCCCC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKE-------------------LQCVFGGKNV  186 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reE-------------------Lke~lG~~~~  186 (277)
                      |+.|..++      |+.|......|+.+     ++.+..++++.+.+...+                   +.+.+|-  .
T Consensus        29 ll~f~~~~------C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i--~  100 (136)
T 1zzo_A           29 VLWFWAPW------CPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGV--T  100 (136)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTC--C
T ss_pred             EEEEEcCC------ChhHHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCC--C
Confidence            44455554      68999876666653     688989998765433332                   2333332  6


Q ss_pred             CCcEEEe---CCEE
Q 048504          187 TLPQVFI---RGKH  197 (277)
Q Consensus       187 tvPqVFI---~G~~  197 (277)
                      .+|.++|   +|+.
T Consensus       101 ~~P~~~~id~~g~i  114 (136)
T 1zzo_A          101 QQPAYAFVDPHGNV  114 (136)
T ss_dssp             SSSEEEEECTTCCE
T ss_pred             CCceEEEECCCCCE
Confidence            7999876   7876

>1b48_A GST, mgsta4-4, protein (glutathione S-transferase); subunit cooperativity; HET: HAG GSH; 2.60A {Mus musculus} SCOP: a.45.1.1 c.47.1.5 PDB: 1guk_A

Probab=95.42  E-value=0.018  Score=48.49  Aligned_cols=73  Identities=15%  Similarity=0.065  Sum_probs=53.1

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      ..++||+...+      ++|.+|+.+|+..||+|+.+.++..+. ..++++.......++|.+..||..|.....+.+..
T Consensus         2 ~~~~Ly~~~~s------~~~~~v~~~L~~~gi~ye~~~v~~~~~-~~~~~~~~~nP~g~vP~L~~~g~~l~eS~aI~~YL   74 (221)
T 1b48_A            2 AKPKLYYFNGR------GRMESIRWLLAAAGVEFEEEFLETREQ-YEKMQKDGHLLFGQVPLVEIDGMMLTQTRAILSYL   74 (221)
T ss_dssp             CCCEEEBCSSC------TTTHHHHHHHHHHTCCCCCCBCCCHHH-HHHHHTTTCSSSSCSCEEEETTEEECCHHHHHHHH
T ss_pred             CceEEEEeCCC------cchHHHHHHHHHcCCCceEEEeCchHh-HHHHHhcCCCCCCCCCEEEECCEEEecHHHHHHHH
Confidence            35789987654      799999999999999999888864322 23444430012368999999999998887777643

>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A

Probab=95.41  E-value=0.071  Score=39.50  Aligned_cols=56  Identities=16%  Similarity=0.137  Sum_probs=39.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-----CCCeEEEEECC-CCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-----FRVWVDERDVS-MDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-----~gV~y~ErDVs-~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+++|      |+.|+++...|+.     .++.|..+|++ .+.    ++.+.+|-  ..+|.+++  +|+.+
T Consensus        28 lv~f~a~w------C~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~----~~~~~~~v--~~~Pt~~~~~~G~~~   91 (111)
T 2pu9_C           28 VLDMFTQW------CGPSKAMAPKYEKLAEEYLDVIFLKLDCNQENK----TLAKELGI--RVVPTFKILKENSVV   91 (111)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTH----HHHHHHCC--SBSSEEEEESSSSEE
T ss_pred             EEEEECCc------CHhHHHHCHHHHHHHHHCCCeEEEEEecCcchH----HHHHHcCC--CeeeEEEEEeCCcEE
Confidence            55556655      5899988888765     25889999997 443    45556665  78999777  78654

>3gx0_A GST-like protein YFCG; transferase, glutathione, glutathione disulfide, disulfide bond oxidoreductase; HET: GDS; 2.30A {Escherichia coli}

Probab=95.34  E-value=0.047  Score=45.18  Aligned_cols=69  Identities=7%  Similarity=0.115  Sum_probs=52.1

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeC---C----EEEech
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIR---G----KHVGNA  201 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~---G----~~IGG~  201 (277)
                      ++||+..       +++|.+|+.+|+.+||+|+.+.|+...  ....++.++...  .++|.+.++   |    ..|...
T Consensus         2 ~~Ly~~~-------s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~--g~vP~L~~~~~~~dG~~~~l~eS   72 (215)
T 3gx0_A            2 IDLYFAP-------TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPN--NKIPAIVDHSPADGGEPLSLFES   72 (215)
T ss_dssp             EEEEECS-------SHHHHHHHHHHHHHTCCEEEEECCTTTTGGGSHHHHTTCTT--SCSCEEEESSCTTCCSCEEEESH
T ss_pred             eEEEeCC-------CCChHHHHHHHHHcCCCcEEEecCCCCCCCCChHHHHhCCC--CCCCEEEeCCCCCCCCceEEEcH
Confidence            5788764       489999999999999999988887542  234556655533  679999998   4    788888


Q ss_pred             hHHHHHH
Q 048504          202 DVLKSMY  208 (277)
Q Consensus       202 del~~L~  208 (277)
                      ..+.+..
T Consensus        73 ~aI~~yL   79 (215)
T 3gx0_A           73 GAILLYL   79 (215)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7777643

>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}

Probab=95.31  E-value=0.11  Score=39.57  Aligned_cols=56  Identities=16%  Similarity=0.338  Sum_probs=40.1

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+++|      |+.|..+...|+..       +|.|..+|++.+++    +.+.++-  ..+|.+++  +|+.+
T Consensus        37 vv~f~a~~------C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~----~~~~~~v--~~~Pt~~~~~~G~~~  101 (121)
T 2j23_A           37 VIDFWATW------CGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQ----IAQEVGI--RAMPTFVFFKNGQKI  101 (121)
T ss_dssp             EEEEECTT------CSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHH----HHHHHTC--CSSSEEEEEETTEEE
T ss_pred             EEEEECCC------CHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHH----HHHHcCC--CcccEEEEEECCeEE
Confidence            45555555      57999988888752       38899999988764    4455654  68999876  88764

>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A

Probab=95.29  E-value=0.084  Score=38.53  Aligned_cols=57  Identities=14%  Similarity=0.296  Sum_probs=40.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      ||.|+++|      |+.|+.+...|+.    +     +|.+..+|++.+++    +.+.++-  ..+|.+++  +|+.+.
T Consensus        25 lv~f~~~~------C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----l~~~~~v--~~~Pt~~~~~~g~~~~   92 (111)
T 3uvt_A           25 FIKFYAPW------CGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERN----ICSKYSV--RGYPTLLLFRGGKKVS   92 (111)
T ss_dssp             EEEEECSS------CHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEECCC------ChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHh----HHHhcCC--CcccEEEEEeCCcEEE
Confidence            55566665      5899998887764    2     56788899987754    4555654  68998866  886553

>2ycd_A Glutathione S-transferase; SOIL bacteria, herbicide detoxification; HET: GTB; 1.40A {Agrobacterium tumefaciens} PDB: 3lq7_A

Probab=95.24  E-value=0.0099  Score=50.35  Aligned_cols=76  Identities=13%  Similarity=0.008  Sum_probs=53.6

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      +++||....|.-| .+++|.+|+.+|+.+||+|+.+.|+.......++.++...  .++|.+..||..|.+...+.+..
T Consensus        18 ~~~Ly~~~~s~~~-~~~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~nP~--g~vP~L~~~g~~l~eS~aI~~yL   93 (230)
T 2ycd_A           18 TITVFERSPDGGR-GLARDMPVRWALEEVGQPYHVRRLSFEAMKEASHLAYQPF--GQIPSYEQGDLILFESGAIVMHI   93 (230)
T ss_dssp             EEEEESSCTTTTS-SCSTHHHHHHHHHHHTCCCEEEEECHHHHTSTTGGGTCTT--SCSCEEEETTEEEECHHHHHHHH
T ss_pred             eEEEecCCCcccc-CCCccHHHHHHHHHcCCCceEEEeCccccCCHHHHhcCCC--CCCCEEEECCEEEEcHHHHHHHH
Confidence            6899988754100 0168999999999999999988886421112233344332  68999999999998888777644

>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1

Probab=95.24  E-value=0.092  Score=39.51  Aligned_cols=60  Identities=10%  Similarity=0.030  Sum_probs=40.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHH----hCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFR----GFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~----~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+.+|      |++|+++...|+    .+++.+..+|++...  ....++.+.+|-  ..+|.+++  +|+.+
T Consensus        33 ~v~f~a~w------C~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i--~~~Pt~~~~~~G~~~  100 (118)
T 1zma_A           33 TFFIGRKT------CPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGI--PTVPGFVHITDGQIN  100 (118)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTC--CSSCEEEEEETTEEE
T ss_pred             EEEEECCC------CccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCC--CCCCeEEEEECCEEE
Confidence            55566665      589998766655    456777788886543  344567777765  78999854  78755

>4hz4_A Glutathione-S-transferase; enzyme function initiative; 1.62A {Actinobacillus pleuropneumoniae}

Probab=95.16  E-value=0.036  Score=46.22  Aligned_cols=70  Identities=6%  Similarity=-0.059  Sum_probs=52.8

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHH---HHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSA---YKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~---~reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      .++||....       +.|.+|+.+|+..||+|+.+.|+....   ...++.++...  .++|.+..||..|.....+.+
T Consensus         3 ~~~Ly~~~~-------~~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~nP~--g~vP~L~~~g~~l~eS~aI~~   73 (217)
T 4hz4_A            3 MITLHYLKQ-------SCSHRIVWLLEALGLDYELKIYDRLEGTGFAPEELKAQHPL--GKAPVLQDGDLVLAEGNAIIQ   73 (217)
T ss_dssp             CEEEEEESS-------STTHHHHHHHHHHTCCCEEEEECCCTTTCCCCHHHHTTSTT--CCSCEEEETTEEEECHHHHHH
T ss_pred             eEEEeecCC-------CcHHHHHHHHHHcCCCceEEEEecCcccccCCHHHHhcCCC--CCCCEEEECCEeeecHHHHHH
Confidence            478998763       369999999999999999888865421   23455655543  689999999999988887776


Q ss_pred             HH
Q 048504          207 MY  208 (277)
Q Consensus       207 L~  208 (277)
                      ..
T Consensus        74 yL   75 (217)
T 4hz4_A           74 HL   75 (217)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A

Probab=95.15  E-value=0.045  Score=40.99  Aligned_cols=57  Identities=11%  Similarity=0.240  Sum_probs=41.1

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      ||.|+++|      |+.|+++...|+.      .+|.+..+|++.+.+    +.+.+|-  ..+|.+++  +|+.++
T Consensus        21 lv~f~a~w------C~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~----l~~~~~v--~~~Pt~~~~~~G~~~~   85 (112)
T 2voc_A           21 LADFWAPW------CGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQE----TAGKYGV--MSIPTLLVLKDGEVVE   85 (112)
T ss_dssp             EEEEECTT------BGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCS----HHHHTTC--CSBSEEEEEETTEEEE
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHH----HHHHcCC--CcccEEEEEeCCEEEE
Confidence            44556665      5799988777764      268999999988754    4455654  68999988  998653

>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}

Probab=95.13  E-value=0.094  Score=39.96  Aligned_cols=51  Identities=18%  Similarity=0.326  Sum_probs=38.0

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-----CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-----FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI  193 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-----~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI  193 (277)
                      ||.|+++|      |+.|+.+...|+.     .++.|..+|++.+++    +.+.++-  ..+|.+++
T Consensus        27 lv~f~a~w------C~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~----~~~~~~i--~~~Pt~~~   82 (118)
T 2f51_A           27 LVDFFATW------CGPCQRLGQILPSIAEANKDVTFIKVDVDKNGN----AADAYGV--SSIPALFF   82 (118)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHH----HHHHTTC--CSSSEEEE
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHHCCCeEEEEEECCCCHH----HHHhcCC--CCCCEEEE
Confidence            55566665      5899998887776     478999999998754    5555664  68999865

>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}

Probab=95.12  E-value=0.13  Score=39.47  Aligned_cols=57  Identities=12%  Similarity=0.336  Sum_probs=41.1

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      ||.|+++|      |+.|++....|+..      +|.+..+|++.++    ++.+.++-  ..+|.+++  +|+.+.
T Consensus        46 lv~F~a~w------C~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~----~l~~~~~v--~~~Pt~~~~~~G~~~~  110 (128)
T 3ul3_B           46 VLYFFAKW------CQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNE----SLARKFSV--KSLPTIILLKNKTMLA  110 (128)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCH----HHHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEECCC------CHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCH----HHHHHcCC--CCcCEEEEEECCEEEE
Confidence            44466665      58999888777642      4778889988775    45566664  78999877  888765

>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}

Probab=95.02  E-value=0.052  Score=42.23  Aligned_cols=56  Identities=11%  Similarity=0.271  Sum_probs=39.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+++|      |+.|+++...|+.    +  +|.|..+|++.+++    +.+.++-  ..+|.+++  +|+.+
T Consensus        44 lv~F~a~w------C~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~----l~~~~~v--~~~Pt~~~~~~G~~~  107 (128)
T 2o8v_B           44 LVDFWAEW------CGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPG----TAPKYGI--RGIPTLLLFKNGEVA  107 (128)
T ss_dssp             EEEEECSS------CHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCT----TSGGGTC--CSSSEEEEEETTEEE
T ss_pred             EEEEECCC------CHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHH----HHHHcCC--CccCEEEEEeCCEEE
Confidence            45556665      5899988777764    3  48888999987754    3344554  68999988  89864

>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A

Probab=94.91  E-value=0.047  Score=45.99  Aligned_cols=54  Identities=22%  Similarity=0.278  Sum_probs=41.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGK  196 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~  196 (277)
                      |+.|+++||      ++|..+...|+..     +|.+..+|++.+++    +.+.+|-  ..+|.++++|+
T Consensus       140 ~v~F~a~wC------~~C~~~~~~~~~~~~~~~~v~~~~vd~~~~~~----l~~~~~v--~~~Pt~~~~G~  198 (229)
T 2ywm_A          140 IWVFVTTSC------GYCPSAAVMAWDFALANDYITSKVIDASENQD----LAEQFQV--VGVPKIVINKG  198 (229)
T ss_dssp             EEEEECTTC------TTHHHHHHHHHHHHHHCTTEEEEEEEGGGCHH----HHHHTTC--CSSSEEEEGGG
T ss_pred             EEEEECCCC------cchHHHHHHHHHHHHHCCCeEEEEEECCCCHH----HHHHcCC--cccCEEEECCE
Confidence            344888876      6999988888763     68889999987754    4555664  78999999987

>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2

Probab=94.88  E-value=0.025  Score=41.81  Aligned_cols=55  Identities=16%  Similarity=0.291  Sum_probs=38.0

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh---------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG---------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKH  197 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~---------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~  197 (277)
                      ||.|+++||      +.|+++...|+.         ..|.+..+|+..++.    +.+.++-  ..+|.+++  +|+.
T Consensus        28 lv~f~~~~C------~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~----~~~~~~v--~~~Pt~~~~~~g~~   93 (120)
T 1mek_A           28 LVEFYAPWC------GHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESD----LAQQYGV--RGYPTIKFFRNGDT   93 (120)
T ss_dssp             EEEEECSSC------STTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCS----SHHHHTC--CSSSEEEEEESSCS
T ss_pred             EEEEECCCC------HHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHH----HHHHCCC--CcccEEEEEeCCCc
Confidence            556666665      799877766654         247888999987754    4444554  68999977  7753

>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}

Probab=94.84  E-value=0.17  Score=40.77  Aligned_cols=56  Identities=14%  Similarity=0.266  Sum_probs=41.1

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+.+|      |+.|+.....|+.      .+|.|..+|++.+++    +.+.+|-  ..+|.+++  +|+.+
T Consensus        68 lv~F~a~w------C~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~----l~~~~~i--~~~Pt~~~~~~G~~~  131 (155)
T 2ppt_A           68 LVDFWAPW------CGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPA----VAGRHRI--QGIPAFILFHKGREL  131 (155)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTH----HHHHTTC--CSSSEEEEEETTEEE
T ss_pred             EEEEECCC------CHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHH----HHHHcCC--CcCCEEEEEeCCeEE
Confidence            55566655      5899988887764      258999999988754    5556664  78999976  88764

>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.82  E-value=0.14  Score=38.75  Aligned_cols=55  Identities=16%  Similarity=0.324  Sum_probs=40.5

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh-------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCE
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG-------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGK  196 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~-------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~  196 (277)
                      -||.|+++|      |+.|+++...|+.       .+|.|..+|++.+.+    +.+.++-  ..+|.+++  +|+
T Consensus        25 vlv~f~a~w------C~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~----~~~~~~v--~~~Pt~~~~~~G~   88 (126)
T 1x5e_A           25 WMIEFYAPW------CPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPG----LSGRFII--NALPTIYHCKDGE   88 (126)
T ss_dssp             EEEEEECSS------CHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTE
T ss_pred             EEEEEECCC------CHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHH----HHHHcCC--cccCEEEEEeCCe
Confidence            355666665      5899988887765       268999999988754    4555654  68999876  887

>3c8e_A YGHU, glutathione S-transferase homologue; glutathione transferase homologue, E. coli; HET: GSH; 1.50A {Escherichia coli}

Probab=94.81  E-value=0.079  Score=46.95  Aligned_cols=75  Identities=9%  Similarity=0.085  Sum_probs=55.2

Q ss_pred             CCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCC-
Q 048504          125 PGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRG-  195 (277)
Q Consensus       125 ~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G-  195 (277)
                      |.+...++||+..       +++|.+|+.+|+.+      ||+|+.+.|+...  ....++.++...  .+||.|..+| 
T Consensus        39 ~~~~~~~~Ly~~~-------sp~~~rvr~~L~e~~~~g~kgi~ye~~~v~~~~~e~~~~~~~~~nP~--gkVPvL~~~~g  109 (288)
T 3c8e_A           39 PVGKHPLQLYSLG-------TPNGQKVTIMLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPN--SKIPALRDHTH  109 (288)
T ss_dssp             CCCSSSEEEEECS-------SHHHHHHHHHHHHHHHTTCGGGCEEEEECCGGGTGGGBHHHHHHCTT--CCSCEEEETTS
T ss_pred             CCCCCceEEecCC-------CCChHHHHHHHHHhhhcccCCCCcEEEEeccccccccCHHHHHhCCC--CCCCEEEeCCC
Confidence            3455679999752       58999999999988      9999988886432  233566666643  6899999876 


Q ss_pred             ---EEEechhHHHHHH
Q 048504          196 ---KHVGNADVLKSMY  208 (277)
Q Consensus       196 ---~~IGG~del~~L~  208 (277)
                         ..|.....+.+..
T Consensus       110 ~~~~~l~ES~aI~~YL  125 (288)
T 3c8e_A          110 NPPIRVFESGSILLYL  125 (288)
T ss_dssp             SSCEEEESHHHHHHHH
T ss_pred             CCceEEeCHHHHHHHH
Confidence               7787777766643

>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}

Probab=94.79  E-value=0.35  Score=37.46  Aligned_cols=56  Identities=21%  Similarity=0.420  Sum_probs=39.7

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe---CCEE
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI---RGKH  197 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI---~G~~  197 (277)
                      -||.|+++|      |++|+++...|+.    +  .|.+..+|++.+.+    +.+.++-  ..+|.+++   +|+.
T Consensus        41 ~lv~f~a~w------C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~----l~~~~~v--~~~Pt~~~~~~~G~~  105 (136)
T 2l5l_A           41 AIVDFYADW------CGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQE----LAGAFGI--RSIPSILFIPMEGKP  105 (136)
T ss_dssp             EEEEEECTT------SHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH----HHHHTTC--CSSCEEEEECSSSCC
T ss_pred             EEEEEECCc------CHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHH----HHHHcCC--CCCCEEEEECCCCcE
Confidence            366666666      5899988887765    3  48899999988753    4555654  68999854   6754

>1gsu_A GST, CGSTM1-1, class-MU glutathione S-transferase; detoxification enzyme, S-hexyl glutathione; HET: GTX; 1.94A {Gallus gallus} SCOP: a.45.1.1 c.47.1.5 PDB: 1c72_A*

Probab=94.76  E-value=0.096  Score=43.83  Aligned_cols=72  Identities=13%  Similarity=0.044  Sum_probs=50.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHH----HHHHHHHHh--CCCCCCCcEEEeCCEEEechhHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSA----YKKELQCVF--GGKNVTLPQVFIRGKHVGNADVL  204 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~----~reELke~l--G~~~~tvPqVFI~G~~IGG~del  204 (277)
                      ++||+...+      ++|.+|+.+|+.+||+|+.+.|+....    ..+++.+..  |....++|.+..||..|.....+
T Consensus         2 ~~L~~~~~~------~~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~d~g~~l~eS~aI   75 (219)
T 1gsu_A            2 VTLGYWDIR------GLAHAIRLLLEYTETPYQERRYKAGPAPDFDPSDWTNEKEKLGLDFPNLPYLIDGDVKLTQSNAI   75 (219)
T ss_dssp             EEEEEESSS------GGGHHHHHHHHHTTCCEEEEEECCCSTTSCCTHHHHTTGGGSCCSSCCSSEEEETTEEEESHHHH
T ss_pred             cEEEEeCCC------chhHHHHHHHHHcCCCceEEEeccCcccccchhhHhhhcccCCCCCCCCCEEEECCEEEecHHHH
Confidence            467777654      799999999999999999887764321    123443332  21235799999889988888777


Q ss_pred             HHHH
Q 048504          205 KSMY  208 (277)
Q Consensus       205 ~~L~  208 (277)
                      .+..
T Consensus        76 ~~yL   79 (219)
T 1gsu_A           76 LRYI   79 (219)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7643

>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1

Probab=94.75  E-value=0.059  Score=46.07  Aligned_cols=66  Identities=15%  Similarity=0.268  Sum_probs=42.5

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhC---CCeEEEEECCC---CHH-----------------------------
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGF---RVWVDERDVSM---DSA-----------------------------  172 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~---gV~y~ErDVs~---d~~-----------------------------  172 (277)
                      ...|++|+-.+      ||+|++....|+.+   +|.+..+++..   ++.                             
T Consensus        87 k~~vv~F~d~~------Cp~C~~~~~~l~~~~~~~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~  160 (211)
T 1t3b_A           87 KHVVTVFMDIT------CHYCHLLHQQLKEYNDLGITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKE  160 (211)
T ss_dssp             SEEEEEEECTT------CHHHHHHHTTHHHHHHTTEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSS
T ss_pred             CEEEEEEECCC------CHhHHHHHHHHHHHHhCCcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCCh
Confidence            34577777776      58999877666553   67776665531   111                             


Q ss_pred             --------HHHHHHHHhCCCCCCCcEEEe-CCEEEech
Q 048504          173 --------YKKELQCVFGGKNVTLPQVFI-RGKHVGNA  201 (277)
Q Consensus       173 --------~reELke~lG~~~~tvPqVFI-~G~~IGG~  201 (277)
                              ...++.+.+|-  ..+|.+|| ||+.+.|+
T Consensus       161 ~~~~~~v~~~~~l~~~~gV--~gTPt~vi~nG~~~~G~  196 (211)
T 1t3b_A          161 VKTPNIVKKHYELGIQFGV--RGTPSIVTSTGELIGGY  196 (211)
T ss_dssp             CCCSSHHHHHHHHHHHHTC--CSSCEEECTTSCCCCSC
T ss_pred             HHHHHHHHHHHHHHHHcCC--CcCCEEEEeCCEEecCC
Confidence                    11233444554  78999999 99988876

>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}

Probab=94.75  E-value=0.12  Score=41.36  Aligned_cols=66  Identities=15%  Similarity=0.310  Sum_probs=43.8

Q ss_pred             CcEEEEE--ecCCCCCCCChhHHHHHHHH---H------hCCCeEEEEECCCCH-------HHHHHHHHHhCCCCCCCcE
Q 048504          129 DRIVVYL--TSLRGIRRTFEDCYAVRMIF---R------GFRVWVDERDVSMDS-------AYKKELQCVFGGKNVTLPQ  190 (277)
Q Consensus       129 ~kVVLYt--tSlcgiR~Tc~~C~~Vk~iL---~------~~gV~y~ErDVs~d~-------~~reELke~lG~~~~tvPq  190 (277)
                      ..|+||+  .+||      +.|++....|   .      ..++.+..+|++.+.       ....++.+.++-  ..+|.
T Consensus        48 k~vlv~F~ga~wC------~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v--~~~Pt  119 (154)
T 2ju5_A           48 KPIGLFFTGSDWC------MWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKV--TGFPE  119 (154)
T ss_dssp             CCEEEEEECTTTC------HHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTC--CSSSE
T ss_pred             CeEEEEEeCCCCC------HhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCC--CCCCE
Confidence            3566655  4665      7999877655   2      135778888887654       334567777765  67999


Q ss_pred             EEe---CCEEEe--chh
Q 048504          191 VFI---RGKHVG--NAD  202 (277)
Q Consensus       191 VFI---~G~~IG--G~d  202 (277)
                      ++|   +|+.+.  |+.
T Consensus       120 ~~~~d~~G~~~~~~G~~  136 (154)
T 2ju5_A          120 LVFIDAEGKQLARMGFE  136 (154)
T ss_dssp             EEEECTTCCEEEEECCC
T ss_pred             EEEEcCCCCEEEEecCC
Confidence            865   787665  554

>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A

Probab=94.71  E-value=0.092  Score=44.83  Aligned_cols=67  Identities=19%  Similarity=0.202  Sum_probs=43.1

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhC---CCeEEEEECCC---CH------------------------------
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGF---RVWVDERDVSM---DS------------------------------  171 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~---gV~y~ErDVs~---d~------------------------------  171 (277)
                      ...|++|+..+      ||+|++....|+.+   +|.+..+.+..   ++                              
T Consensus        87 k~~vv~F~d~~------Cp~C~~~~~~l~~l~~~~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~  160 (216)
T 1eej_A           87 KHVITVFTDIT------CGYCHKLHEQMADYNALGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAP  160 (216)
T ss_dssp             CEEEEEEECTT------CHHHHHHHTTHHHHHHTTEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCC
T ss_pred             CEEEEEEECCC------CHHHHHHHHHHHHHHhCCcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCCh
Confidence            34577777776      58999877766553   67777665531   11                              


Q ss_pred             -------HHHHHHHHHhCCCCCCCcEEEe-CCEEEechh
Q 048504          172 -------AYKKELQCVFGGKNVTLPQVFI-RGKHVGNAD  202 (277)
Q Consensus       172 -------~~reELke~lG~~~~tvPqVFI-~G~~IGG~d  202 (277)
                             +...++.+.+|-  ..+|.+|| ||+.+.|+.
T Consensus       161 ~~~~~~v~~~~~l~~~~gV--~gtPt~v~~dG~~~~G~~  197 (216)
T 1eej_A          161 ASCDVDIADHYALGVQLGV--SGTPAVVLSNGTLVPGYQ  197 (216)
T ss_dssp             CCCSCCHHHHHHHHHHHTC--CSSSEEECTTSCEEESCC
T ss_pred             hHHHHHHHHHHHHHHHcCC--CccCEEEEcCCeEecCCC
Confidence                   112234445554  78999998 888887763

>2fhe_A GST, glutathione S-transferase; transferase-substrate complex; HET: GSH; 2.30A {Fasciola hepatica} SCOP: a.45.1.1 c.47.1.5 PDB: 2wrt_A 1fhe_A*

Probab=94.58  E-value=0.14  Score=42.58  Aligned_cols=72  Identities=14%  Similarity=0.016  Sum_probs=50.0

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHh--CCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVF--GGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~l--G~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +++||+-..+      ++|.+|+.+|+.+||+|+.+.|+... ..+.+....  +....++|.+..||..|.....+.+.
T Consensus         1 ~~~L~y~~~~------~~~~~v~~~L~~~gi~ye~~~v~~~~-~~~~~~~~~~~~~P~g~vP~L~d~g~~l~eS~aI~~Y   73 (216)
T 2fhe_A            1 PAKLGYWKIR------GLQQPVRLLLEYLGEKYEEQIYERDD-GEKWFSKKFELGLDLPNLPYYIDDKCKLTQSLAILRY   73 (216)
T ss_dssp             CEEEEEESSS------TTTHHHHHHHHHTTCCEEEEEECTTC-HHHHHHHTTTSCCSSCCSSEEECSSCEEESHHHHHHH
T ss_pred             CcEEEEcCCC------chhHHHHHHHHHcCCCceEEeeCCCc-hhhhhccccccCCCCCCCCEEEECCEEEEeHHHHHHH
Confidence            3678777654      69999999999999999988887531 112222222  21235799998888888888777764


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        74 L   74 (216)
T 2fhe_A           74 I   74 (216)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.57  E-value=0.034  Score=43.19  Aligned_cols=49  Identities=24%  Similarity=0.527  Sum_probs=35.7

Q ss_pred             CCCCCCCccc------eEeCCCCCCcceeeeCCCC--cceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVR------FVPCGNCSGSRKVFDEADG--VPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~r------fVpC~~C~GS~Kv~~~~~~--~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+      ...|+.|+|+-.+......  ....|+.|+-.|.+   +|+.|.
T Consensus        29 ~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i~~~C~~C~   88 (104)
T 2ctt_A           29 DTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIIISPCVVCR   88 (104)
T ss_dssp             EECSSSSSSSSCTTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEECSSCCSSSS
T ss_pred             eECCCCcCCccCCCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceECCCcCCCCC
Confidence            5788887765      5789999999766432211  24689999999987   799884

>1oe8_A Glutathione S-transferase; schistosomiasis, detoxifying enzyme, prostaglandin D2 synthase, vaccine candidate; HET: GSH; 1.65A {Schistosoma haematobium} SCOP: a.45.1.1 c.47.1.5 PDB: 1oe7_A* 2c80_A* 2ca8_A* 2f8f_A* 2c8u_A 2caq_A* 2cai_A* 1u3i_A*

Probab=94.45  E-value=0.058  Score=44.50  Aligned_cols=69  Identities=20%  Similarity=0.242  Sum_probs=49.7

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEE-----EechhH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKH-----VGNADV  203 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~-----IGG~de  203 (277)
                      .+++||+...+      ++|.+|+.+|+..||+|+.+.++...  ..++......  .++|.+.++|..     |.+...
T Consensus         4 ~~~~Ly~~~~s------~~~~~v~~~L~~~gi~~e~~~v~~~~--~~~~~~~~P~--g~vP~L~~~~~~g~~~~l~eS~a   73 (211)
T 1oe8_A            4 DHIKVIYFNGR------GRAESIRMTLVAAGVNYEDERISFQD--WPKIKPTIPG--GRLPAVKITDNHGHVKWMVESLA   73 (211)
T ss_dssp             CEEEEEESCTT------STTHHHHHHHHHTTCCCEEEECCTTT--HHHHGGGSTT--SCSCEEEEECTTCCEEEEESHHH
T ss_pred             CceEEEEeCCC------ChHHHHHHHHHHcCCCceEEEechHh--HHHhcccCCC--CCCCEEEECCccccceeeccHHH
Confidence            35889887654      79999999999999999999887532  2334443333  689999886643     766666


Q ss_pred             HHHH
Q 048504          204 LKSM  207 (277)
Q Consensus       204 l~~L  207 (277)
                      +.+.
T Consensus        74 I~~y   77 (211)
T 1oe8_A           74 IARY   77 (211)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6553

>3iso_A Putative glutathione transferase; GST; HET: GSH; 1.90A {Clonorchis sinensis}

Probab=94.44  E-value=0.1  Score=43.37  Aligned_cols=69  Identities=10%  Similarity=-0.011  Sum_probs=49.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECC--CCHHHHHHHHHHh--CCCCCCCcEEEeCCEEEechhHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVS--MDSAYKKELQCVF--GGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs--~d~~~reELke~l--G~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      ++||+...+      ++|.+|+.+|+..||+|+.+.|+  ..++.   +....  +....++|.+..||..|.+...+.+
T Consensus         3 ~~Ly~~~~s------~~~~~vr~~L~~~gi~ye~~~v~~~~~~~~---~~~~~~~~~P~g~vP~L~d~~~~l~eS~aI~~   73 (218)
T 3iso_A            3 PVLGYWKIR------GLAQPIRLLLEYVGDSYEEHSYGRCDGEKW---QNDKHNLGLELPNLPYYKDGNFSLTQSLAILR   73 (218)
T ss_dssp             CEEEEESSS------GGGHHHHHHHHHHTCCCEEEEECTTCHHHH---HHHTTSSCCSSCCSSEEEETTEEEESHHHHHH
T ss_pred             cEEEEeCCC------cchHHHHHHHHHcCCCceeeccCCCCHHHH---HhhchhcCCCCCCCCeEEECCEEEecHHHHHH
Confidence            578777654      79999999999999999998886  22222   22221  1223679999888888888877776


Q ss_pred             HH
Q 048504          207 MY  208 (277)
Q Consensus       207 L~  208 (277)
                      ..
T Consensus        74 yL   75 (218)
T 3iso_A           74 YI   75 (218)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>4ecj_A Glutathione S-transferase; transferase-like protein, transcription regulation; HET: GSH; 1.76A {Pseudomonas aeruginosa} PDB: 4eci_A*

Probab=94.43  E-value=0.078  Score=45.45  Aligned_cols=70  Identities=13%  Similarity=0.093  Sum_probs=52.0

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeC-C--EEEechhHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIR-G--KHVGNADVL  204 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~-G--~~IGG~del  204 (277)
                      .++||...       +++|.+|+.+|+.+||+|+.+.|+...  ....++.++...  .++|.|.++ |  ..|.+...+
T Consensus         3 m~~Ly~~~-------sp~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~nP~--g~vPvL~~~dg~~~~l~eS~aI   73 (244)
T 4ecj_A            3 MIDLYTAA-------TPNGHKVSIALEEMGLPYRVHALSFDKKEQKAPEFLRINPN--GRIPAIVDRDNDDFAVFESGAI   73 (244)
T ss_dssp             CEEEEECS-------SHHHHHHHHHHHHHTCCEEEEECCGGGTGGGSHHHHTTCTT--CCSCEEEEGGGTTEEEESHHHH
T ss_pred             EEEEecCC-------CcCHHHHHHHHHHcCCCceEEEecCCCCCcCCHHHHhcCCC--CCCCEEEECCCCeEEEecHHHH
Confidence            37889764       489999999999999999998887532  233556655543  689999986 4  478877777


Q ss_pred             HHHH
Q 048504          205 KSMY  208 (277)
Q Consensus       205 ~~L~  208 (277)
                      .+..
T Consensus        74 ~~YL   77 (244)
T 4ecj_A           74 LIYL   77 (244)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6643

>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A

Probab=94.40  E-value=0.32  Score=37.43  Aligned_cols=52  Identities=19%  Similarity=0.450  Sum_probs=37.1

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI  193 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI  193 (277)
                      -||.|+.+|      |++|+.+...|+.    +  .|.+..+|++.+++    +.+.+|-  ..+|.+++
T Consensus        54 vlv~f~a~w------C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~v--~~~Pt~~~  111 (141)
T 3hxs_A           54 AIVDFYADW------CGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPE----LARDFGI--QSIPTIWF  111 (141)
T ss_dssp             EEEEEECTT------CTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH----HHHHTTC--CSSSEEEE
T ss_pred             EEEEEECCC------CHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHH----HHHHcCC--CCcCEEEE
Confidence            355566666      5799988877764    3  48889999988764    4555664  78999865

>2c4j_A Glutathione S-transferase MU 2; glutathione transferase, multigene family; HET: GSO; 1.35A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1xw5_A* 1ykc_A* 2ab6_A* 2gtu_A 3gtu_A 3gur_A* 1hna_A* 1hnb_A* 1hnc_A* 1xw6_A* 1xwk_A* 1yj6_A* 2f3m_A* 2dc5_A 1gtu_A 4gtu_A 6gsu_A* 6gsv_A* 6gsw_A* 2gst_A* ...

Probab=94.38  E-value=0.12  Score=42.99  Aligned_cols=72  Identities=13%  Similarity=0.182  Sum_probs=50.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--H-HHHH-HHHHh--CCCCCCCcEEEeCCEEEechhHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--A-YKKE-LQCVF--GGKNVTLPQVFIRGKHVGNADVL  204 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~-~reE-Lke~l--G~~~~tvPqVFI~G~~IGG~del  204 (277)
                      ++||+...+      ++|.+|+.+|+..||+|+.+.|+...  + ...+ +....  |.....+|.+..||..|.....+
T Consensus         3 ~~Ly~~~~s------~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~g~P~g~vP~L~d~~~~l~eS~aI   76 (218)
T 2c4j_A            3 MTLGYWNIR------GLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLPYLIDGTHKITQSNAI   76 (218)
T ss_dssp             EEEEEESSS------GGGHHHHHHHHHTTCCEEEEEECCCCTTTTCCHHHHTTTTSSCCSSCCSSEEEETTEEEESHHHH
T ss_pred             cEEEEeCCC------chhHHHHHHHHHcCCCceEEEeecCcccccchhHHhhhccccCCCCCCCCEEEECCeEeeeHHHH
Confidence            678887654      79999999999999999988876432  1 1222 22222  11125799998888888888777


Q ss_pred             HHHH
Q 048504          205 KSMY  208 (277)
Q Consensus       205 ~~L~  208 (277)
                      .+..
T Consensus        77 ~~yL   80 (218)
T 2c4j_A           77 LRYI   80 (218)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7643

>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=94.35  E-value=0.19  Score=38.55  Aligned_cols=54  Identities=17%  Similarity=0.268  Sum_probs=37.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-------C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-------F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGK  196 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-------~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~  196 (277)
                      ||.|+++|      |+.|+++...|+.       .  .|.+..+|+..+.    +|.+.++-  ..+|.+++  +|+
T Consensus        38 lv~f~a~w------C~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~----~~~~~~~v--~~~Pt~~~~~~G~  102 (140)
T 2dj1_A           38 LLEFYAPW------CGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSAS----MLASKFDV--SGYPTIKILKKGQ  102 (140)
T ss_dssp             EEEECCTT------CHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCH----HHHHHTTC--CSSSEEEEEETTE
T ss_pred             EEEEECCC------CHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccH----HHHHHCCC--CccCeEEEEECCc
Confidence            44455555      5899977766654       2  3888899998774    45555654  68999977  887

>3uar_A Glutathione S-transferase; GSH binding site; HET: GSH; 2.60A {Methylococcus capsulatus} PDB: 3uap_A*

Probab=94.34  E-value=0.043  Score=46.45  Aligned_cols=69  Identities=12%  Similarity=0.151  Sum_probs=50.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH---HHHHHHHHHhCCCCCCCcEEEe-CCEEEechhHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS---AYKKELQCVFGGKNVTLPQVFI-RGKHVGNADVLKS  206 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~---~~reELke~lG~~~~tvPqVFI-~G~~IGG~del~~  206 (277)
                      ++||....+       .|.+|+.+|+..||+|+.+.|+...   ...+++.++...  .++|.+.+ ||..|.....+.+
T Consensus         3 ~~Ly~~~~s-------~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~nP~--g~vP~L~~~dg~~l~eS~aI~~   73 (227)
T 3uar_A            3 MKLYYFPGA-------CSLAPHIVLREAGLDFELENVDLGTKKTGSGADFLQVNPK--GYVPALQLDDGQVLTEDQVILQ   73 (227)
T ss_dssp             EEEEECTTS-------TTHHHHHHHHHHTCCEEEEEEETTTTEETTCCBHHHHCTT--CCSCEEECTTCCEEECHHHHHH
T ss_pred             EEEecCCCc-------chHHHHHHHHHcCCCceEEEeccCcCcccCCHHHHHhCCC--CCCCeEEECCCCEEecHHHHHH
Confidence            678887642       5999999999999999887775432   112456666644  68999998 6778888877776


Q ss_pred             HH
Q 048504          207 MY  208 (277)
Q Consensus       207 L~  208 (277)
                      ..
T Consensus        74 YL   75 (227)
T 3uar_A           74 YL   75 (227)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>4gf0_A Glutathione S-transferase; GST, enzyme function initiative, EFI, structural genomics; HET: GSH; 1.75A {Sulfitobacter}

Probab=94.20  E-value=0.12  Score=43.03  Aligned_cols=69  Identities=12%  Similarity=0.097  Sum_probs=49.9

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEeC-CEEEechhHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFIR-GKHVGNADVLKS  206 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI~-G~~IGG~del~~  206 (277)
                      -+.||+.+.       +.+.+|+-+|+.+||+|+.+.|+..  .....++.++...  .+||.+.++ |..|.....+.+
T Consensus         3 m~kLY~~p~-------s~s~~vr~~L~e~gl~ye~~~v~~~~~~~~~~~~l~~nP~--g~vP~L~~d~g~~l~ES~aI~~   73 (215)
T 4gf0_A            3 MLTLYFTPG-------TISVAVAIAIEEAALPYQPVRVDFATAEQTKPDYLAINPK--GRVPALRLEDDTILTETGALLD   73 (215)
T ss_dssp             SEEEEECTT-------STHHHHHHHHHHTTCCEEEEECCGGGTGGGSHHHHTTCTT--CCSCEEECTTSCEEECHHHHHH
T ss_pred             cEEEEeCCC-------CcHHHHHHHHHHhCCCCEEEEECCCCCccCCHHHHHhCCC--CCcceEEecCCcEEechHHHHH
Confidence            367998763       3678999999999999998877542  2334566655433  679999886 677777666665


Q ss_pred             H
Q 048504          207 M  207 (277)
Q Consensus       207 L  207 (277)
                      .
T Consensus        74 Y   74 (215)
T 4gf0_A           74 Y   74 (215)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}

Probab=94.05  E-value=0.35  Score=36.80  Aligned_cols=56  Identities=13%  Similarity=0.186  Sum_probs=40.6

Q ss_pred             EEE-EEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEE
Q 048504          131 IVV-YLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHV  198 (277)
Q Consensus       131 VVL-YttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~I  198 (277)
                      |+| |+++||      +.|+.+...|+.+     ++.|..+|++.+++    |.+.+|-  ..+|.+  |-+|+.+
T Consensus        23 vvv~F~a~wC------~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~~----l~~~~~V--~~~PT~~~~~~G~~v   86 (105)
T 3zzx_A           23 VVIDFYATWC------GPCKMIAPKLEELSQSMSDVVFLKVDVDECED----IAQDNQI--ACMPTFLFMKNGQKL   86 (105)
T ss_dssp             EEEEEECTTC------HHHHHHHHHHHHHHHHCTTEEEEEEETTTCHH----HHHHTTC--CBSSEEEEEETTEEE
T ss_pred             EEEEEECCCC------CCccCCCcchhhhhhccCCeEEEEEecccCHH----HHHHcCC--CeecEEEEEECCEEE
Confidence            444 777776      6999988888753     57788999988754    5556664  789987  4588754

>4id0_A Glutathione S-transferase-like protein YIBF; GST, enzyme function initiative, structural genomics; HET: GSF; 1.10A {Pseudomonas fluorescens} PDB: 4ibp_A*

Probab=93.94  E-value=0.029  Score=46.28  Aligned_cols=69  Identities=9%  Similarity=0.024  Sum_probs=47.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEE--EECCCCH-HHHHHHHHHhCCCCCCCcEEE-eCCEEEechhHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDE--RDVSMDS-AYKKELQCVFGGKNVTLPQVF-IRGKHVGNADVLKS  206 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~E--rDVs~d~-~~reELke~lG~~~~tvPqVF-I~G~~IGG~del~~  206 (277)
                      +.||+...      +++|.+|+.+|+.+||+|+.  +|+.... ....++.++...  .++|.+. .||..|.....+.+
T Consensus         3 ~~Ly~~~~------s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~~~~nP~--g~vP~L~~~~g~~l~eS~aI~~   74 (214)
T 4id0_A            3 LTLFHNPA------SPYVRKVMVLLHETGQLNRVALQASQLSPVAPDAALNQDNPL--GKIPALRLDNGQVLYDSRVILD   74 (214)
T ss_dssp             EEEEECSS------CHHHHHHHHHHHHHTCGGGEEEEECCCCSSSCCSSCCTTCTT--CCSSEEECTTSCEECSHHHHHH
T ss_pred             eEEecCCC------CChHHHHHHHHHHcCCCcceEEeecccCccCCcHHHHhcCCC--cCCCeEEecCCcEeecHHHHHH
Confidence            78998875      48999999999999999654  5554221 112233344333  6899998 78888877776665


Q ss_pred             H
Q 048504          207 M  207 (277)
Q Consensus       207 L  207 (277)
                      .
T Consensus        75 y   75 (214)
T 4id0_A           75 Y   75 (214)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.88  E-value=0.21  Score=37.73  Aligned_cols=56  Identities=16%  Similarity=0.318  Sum_probs=38.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+++|      |+.|+++...|+.          ..|.|..+|++.+.+    |.+.++-  ..+|.+++  +|+.+
T Consensus        29 lv~f~a~w------C~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----l~~~~~v--~~~Pt~~~~~~g~~~   96 (133)
T 1x5d_A           29 MVEFYAPW------CGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQV----LASRYGI--RGFPTIKIFQKGESP   96 (133)
T ss_dssp             EEEEECTT------CHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCH----HHHHHTC--CSSSEEEEEETTEEE
T ss_pred             EEEEECCC------CHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHH----HHHhCCC--CeeCeEEEEeCCCce
Confidence            55556665      5899977665543          358888999987753    4455654  68999866  67644

>3lsz_A Glutathione S-transferase; xenobiotic, biodegradative metabolism, PSI2, NYSGXRC, structural genomics, protein structure initiative; HET: GSH; 1.70A {Rhodobacter sphaeroides}

Probab=93.77  E-value=0.059  Score=45.00  Aligned_cols=69  Identities=7%  Similarity=-0.055  Sum_probs=52.0

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC-----H--------HHHHHHHHHhCCCCCCCcEEEeCCEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD-----S--------AYKKELQCVFGGKNVTLPQVFIRGKH  197 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d-----~--------~~reELke~lG~~~~tvPqVFI~G~~  197 (277)
                      ++||....      + +|.+|+.+|+.+||+|+.+.|+..     .        ....++.++...  .++|.+..||..
T Consensus         3 ~~Ly~~~~------s-~~~~v~~~L~~~gi~ye~~~v~~~~~~~d~~~~e~~~~~~~~~~~~~nP~--g~vP~L~~~g~~   73 (225)
T 3lsz_A            3 LKIYGVYR------S-RASRPLWLLAELDLPFEHVPVIQANRVAHPHGPEAPLNTASAAYLAVNPL--GQIPCLEEEGLI   73 (225)
T ss_dssp             CEEESCSS------S-TTHHHHHHHHHHTCCCEEECCBCGGGSSCTTSTTCCSBTTCHHHHTTCTT--CCSCEEEETTEE
T ss_pred             EEEEeCCC------C-chHHHHHHHHHcCCCcEEEEeecccccccccccccccccCCHHHHhhCcC--CCCCeEEECCEE
Confidence            57888764      4 899999999999999998888542     0        033455555543  689999999999


Q ss_pred             EechhHHHHHH
Q 048504          198 VGNADVLKSMY  208 (277)
Q Consensus       198 IGG~del~~L~  208 (277)
                      |.....+.+..
T Consensus        74 l~eS~aI~~yL   84 (225)
T 3lsz_A           74 LTESLAITLHI   84 (225)
T ss_dssp             EESHHHHHHHH
T ss_pred             EEcHHHHHHHH
Confidence            98888777643

>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}

Probab=93.72  E-value=0.44  Score=37.02  Aligned_cols=60  Identities=12%  Similarity=-0.042  Sum_probs=39.9

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----CCCeEEEEECCCCH-----HHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----FRVWVDERDVSMDS-----AYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~gV~y~ErDVs~d~-----~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+++|      |+.|++....|+.    +++.|..+|+..+.     +...++.+.+|-  ..+|.+++  +|+.+
T Consensus        35 lv~F~a~w------C~~C~~~~p~l~~l~~~~~v~~~~vd~~~~~~~~~~d~~~~l~~~~~v--~~~Pt~~~~~~G~~v  105 (135)
T 3emx_A           35 ILAVYSKT------CPHCHRDWPQLIQASKEVDVPIVMFIWGSLIGERELSAARLEMNKAGV--EGTPTLVFYKEGRIV  105 (135)
T ss_dssp             EEEEEETT------CHHHHHHHHHHHHHHTTCCSCEEEEEECTTCCHHHHHHHHHHHHHHTC--CSSSEEEEEETTEEE
T ss_pred             EEEEECCc------CHhhhHhChhHHHHHHHCCCEEEEEECCCchhhhhhhhhHHHHHHcCC--ceeCeEEEEcCCEEE
Confidence            55556666      5899988777764    56888899985432     233455666765  78998754  77654

>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A

Probab=93.70  E-value=0.49  Score=36.58  Aligned_cols=54  Identities=20%  Similarity=0.174  Sum_probs=33.7

Q ss_pred             CChhHHHHHHHHHh-------CCCeEEEEECCCCHHHHH------------------HHHHHhCCCCCCCcEEE-e--CC
Q 048504          144 TFEDCYAVRMIFRG-------FRVWVDERDVSMDSAYKK------------------ELQCVFGGKNVTLPQVF-I--RG  195 (277)
Q Consensus       144 Tc~~C~~Vk~iL~~-------~gV~y~ErDVs~d~~~re------------------ELke~lG~~~~tvPqVF-I--~G  195 (277)
                      .|+.|......|..       .+|.+..++++.+++...                  ++.+.+|-  ..+|.+| |  +|
T Consensus        37 ~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v--~~~P~~~lid~~G  114 (151)
T 2f9s_A           37 WCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDV--SPLPTTFLINPEG  114 (151)
T ss_dssp             TCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTC--CSSCEEEEECTTS
T ss_pred             CCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCC--CCCCeEEEECCCC
Confidence            36899866655543       368888888876653322                  33344443  6789965 5  67


Q ss_pred             EEEe
Q 048504          196 KHVG  199 (277)
Q Consensus       196 ~~IG  199 (277)
                      +.+.
T Consensus       115 ~i~~  118 (151)
T 2f9s_A          115 KVVK  118 (151)
T ss_dssp             EEEE
T ss_pred             cEEE
Confidence            6554

>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10

Probab=93.64  E-value=0.3  Score=36.55  Aligned_cols=59  Identities=12%  Similarity=0.053  Sum_probs=37.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C-CCeEEEEECCCCHHHHHHH------------------HHHhCCCCCC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F-RVWVDERDVSMDSAYKKEL------------------QCVFGGKNVT  187 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~-gV~y~ErDVs~d~~~reEL------------------ke~lG~~~~t  187 (277)
                      |+.|..++      |+.|......|..    + ++.+..++++.+++..+++                  .+.+|-  ..
T Consensus        28 lv~f~~~~------C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i--~~   99 (136)
T 1lu4_A           28 VLWFWTPW------CPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNV--PW   99 (136)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTC--CS
T ss_pred             EEEEECCc------ChhHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCC--CC
Confidence            44455555      5899977666654    3 6888889988754433332                  333333  67


Q ss_pred             CcEEEe---CCEE
Q 048504          188 LPQVFI---RGKH  197 (277)
Q Consensus       188 vPqVFI---~G~~  197 (277)
                      +|.++|   +|+.
T Consensus       100 ~P~~~lid~~G~i  112 (136)
T 1lu4_A          100 QPAFVFYRADGTS  112 (136)
T ss_dssp             SSEEEEECTTSCE
T ss_pred             CCEEEEECCCCcE
Confidence            899876   6775

>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}

Probab=92.69  E-value=0.013  Score=42.34  Aligned_cols=57  Identities=18%  Similarity=0.359  Sum_probs=37.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      |+.|++++      |++|+.+...|+..      ++.+..+|++.+.+    +.+.+|-  ..+|.+++  +|+.+.
T Consensus        23 ~v~f~~~~------C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~v--~~~Pt~~~~~~g~~~~   87 (106)
T 2yj7_A           23 LVDFWAPW------CGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPN----TAAQYGI--RSIPTLLLFKNGQVVD   87 (106)
Confidence            55556655      57999888777653      36666777766543    4444554  67899977  777653

>1dug_A Chimera of glutathione S-transferase-synthetic linker-C-terminal fibrinogen gamma...; gamma chain integrin fragment; HET: GSH; 1.80A {Schistosoma japonicum} SCOP: a.45.1.1 c.47.1.5 PDB: 1gne_A* 3qmz_T 1y6e_A 1m9a_A* 1gtb_A* 1gta_A* 1m99_A* 1m9b_A* 1ua5_A* 1u87_A* 1u88_A* 3crt_A* 3cru_A* 3d0z_A*

Probab=93.57  E-value=0.17  Score=43.02  Aligned_cols=72  Identities=11%  Similarity=0.014  Sum_probs=49.7

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHh--CCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVF--GGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~l--G~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +++||+...+      ++|.+|+.+|+..||+|+.+.|+... ..+.+....  +.....+|.+..||..|.....+.+.
T Consensus         1 ~~~L~y~~~s------~~~~~vr~~L~~~gi~ye~~~v~~~~-~~~~~~~~~~~~~P~g~vP~L~d~g~~l~eS~aI~~Y   73 (234)
T 1dug_A            1 SPILGYWKIK------GLVQPTRLLLEYLEEKYEEHLYERDE-GDKWRNKKFELGLEFPNLPYYIDGDVKLTQSMAIIRY   73 (234)
T ss_dssp             CCEEEEESSS------GGGHHHHHHHHHHTCCCEEEEECTTC-HHHHHHHTTSSCCSSCCSSEEECSSCEEESHHHHHHH
T ss_pred             CcEEEEcCCC------CchHHHHHHHHHcCCCceEEEeCCCc-hhhHhhhccccCCCCCCCCEEEECCEEEecHHHHHHH
Confidence            3567777654      79999999999999999988887531 112222221  21235799998888888888777764


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        74 L   74 (234)
T 1dug_A           74 I   74 (234)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A

Probab=93.52  E-value=0.22  Score=39.64  Aligned_cols=57  Identities=12%  Similarity=0.195  Sum_probs=39.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~IG  199 (277)
                      ||.|..+||      +.|+.....|+..      .+.+..+|++.+++    +.+.++-  ..+|.+  |.+|+.+.
T Consensus        27 lv~F~a~wC------~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~----~~~~~~i--~~~Pt~~~~~~G~~v~   91 (142)
T 1qgv_A           27 VIRFGHDWD------PTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPD----FNKMYEL--YDPCTVMFFFRNKHIM   91 (142)
T ss_dssp             EEEEECTTS------HHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCT----TTTSSCS--CSSCEEEEEETTEEEE
T ss_pred             EEEEECCCC------HHHHHHHHHHHHHHHHhCCCeEEEEEccccCHH----HHHHcCC--CCCCEEEEEECCcEEE
Confidence            455666664      7999888777642      47888999987754    3334443  689998  45887663

>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}

Probab=93.48  E-value=0.75  Score=35.73  Aligned_cols=63  Identities=13%  Similarity=0.093  Sum_probs=39.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-------CCCeEEEEECCCCHHH---------------------HHHHHHHhC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-------FRVWVDERDVSMDSAY---------------------KKELQCVFG  182 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-------~gV~y~ErDVs~d~~~---------------------reELke~lG  182 (277)
                      |+.|..++      |+.|......|..       .++.+..++++.+.+.                     ..++.+.+|
T Consensus        33 ll~F~a~~------C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  106 (152)
T 2lrn_A           33 LVDFWFAG------CSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYC  106 (152)
T ss_dssp             EEEEECTT------CTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTT
T ss_pred             EEEEECCC------ChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhC
Confidence            44555565      5689875555443       4588888888765432                     244555565


Q ss_pred             CCCCCCcEEEe---CCEEEech
Q 048504          183 GKNVTLPQVFI---RGKHVGNA  201 (277)
Q Consensus       183 ~~~~tvPqVFI---~G~~IGG~  201 (277)
                      -  ..+|.+||   +|+.+..+
T Consensus       107 v--~~~P~~~lid~~G~i~~~~  126 (152)
T 2lrn_A          107 I--VGFPHIILVDPEGKIVAKE  126 (152)
T ss_dssp             C--CSSCEEEEECTTSEEEEEC
T ss_pred             C--CcCCeEEEECCCCeEEEee
Confidence            4  67999754   68877653

>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}

Probab=93.45  E-value=0.089  Score=44.88  Aligned_cols=56  Identities=14%  Similarity=0.231  Sum_probs=42.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~I  198 (277)
                      ||-|..+||      +.|+.+.-+|+.+      .+.|..+||+..+++    .+..+-  ..+|.+  |-+|++|
T Consensus        45 VVdF~A~WC------gPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~----a~~y~V--~siPT~~fFk~G~~v  108 (160)
T 2av4_A           45 CIRFGHDYD------PDCMKMDELLYKVADDIKNFCVIYLVDITEVPDF----NTMYEL--YDPVSVMFFYRNKHM  108 (160)
T ss_dssp             EEEEECTTS------HHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTT----TTTTTC--CSSEEEEEEETTEEE
T ss_pred             EEEEECCCC------hhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHH----HHHcCC--CCCCEEEEEECCEEE
Confidence            444777876      6999998888753      378999999987654    444554  789998  7899997

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=93.43  E-value=0.056  Score=39.56  Aligned_cols=38  Identities=24%  Similarity=0.700  Sum_probs=31.3

Q ss_pred             CCCCCCCccceE-----------eCCCCCCcceeeeCCCCcceeCCCCCcCceee
Q 048504          227 FVCGSCGDVRFV-----------PCGNCSGSRKVFDEADGVPKRCLECNENGLIR  270 (277)
Q Consensus       227 ~~C~~CGg~rfV-----------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLvr  270 (277)
                      ..|..|.|.+.+           +|+.|+|+-++..      .+|+.|+-.|.++
T Consensus        29 ~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------~~C~~C~G~G~~~   77 (79)
T 1exk_A           29 QTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIK------DPCNKCHGHGRVE   77 (79)
T ss_dssp             EECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECS------SBCGGGTTSSEEE
T ss_pred             CCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEECC------CcCCCCCCeEEEe
Confidence            479999988754           8999999988752      4799999999874

>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A

Probab=93.21  E-value=0.37  Score=40.12  Aligned_cols=51  Identities=14%  Similarity=0.174  Sum_probs=38.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI  193 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI  193 (277)
                      ||.|+++||      ++|+++...|+.          .+|.+..+|++.+++    +.+.+|-  ..+|.+++
T Consensus       138 ~v~F~a~wC------~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~----l~~~~~v--~~~Pt~~~  198 (226)
T 1a8l_A          138 ILVFVTPTC------PYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPE----WADQYNV--MAVPKIVI  198 (226)
T ss_dssp             EEEEECSSC------TTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHH----HHHHTTC--CSSCEEEE
T ss_pred             EEEEeCCCC------CccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHH----HHHhCCC--cccCeEEE
Confidence            677888876      699988877765          268889999987754    4555654  68999877

>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A

Probab=93.08  E-value=0.22  Score=38.15  Aligned_cols=68  Identities=7%  Similarity=0.164  Sum_probs=39.7

Q ss_pred             ChhHHHHHHHHHh----C--CCeEEEEECCCCHHH---HHHHHHHhCCCCCCCcEEEe--CCEEEechhHHHHHHhhccH
Q 048504          145 FEDCYAVRMIFRG----F--RVWVDERDVSMDSAY---KKELQCVFGGKNVTLPQVFI--RGKHVGNADVLKSMYETGEL  213 (277)
Q Consensus       145 c~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~---reELke~lG~~~~tvPqVFI--~G~~IGG~del~~L~EsGeL  213 (277)
                      |+.|+.+...|+.    +  ++.|..+|+...+.+   ..++.+.++-  ..+|.+++  ++..+.|...    ....+|
T Consensus        43 C~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~i--~~~Pt~~~~~~~~~~~g~~~----~~~~~l  116 (123)
T 1wou_A           43 CPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKV--TAVPTLLKYGTPQKLVESEC----LQANLV  116 (123)
T ss_dssp             CHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCC--CSSSEEEETTSSCEEEGGGG----GCHHHH
T ss_pred             CHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCCC--CeeCEEEEEcCCceEecccc----CCHHHH
Confidence            5899999888875    2  688899999422111   1234445654  78999965  3344444332    112346


Q ss_pred             HHHhc
Q 048504          214 ARVLD  218 (277)
Q Consensus       214 ~klL~  218 (277)
                      +++|+
T Consensus       117 ~~~i~  121 (123)
T 1wou_A          117 EMLFS  121 (123)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            66654

>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=93.06  E-value=0.28  Score=37.11  Aligned_cols=52  Identities=15%  Similarity=0.256  Sum_probs=36.1

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI  193 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI  193 (277)
                      -||.|+++||      ++|+++...|+.    +  .+.+..+|++.+.+    |.+.++-  ..+|.+++
T Consensus        38 ~lv~f~a~wC------~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----l~~~~~v--~~~Pt~~~   95 (130)
T 2dml_A           38 WLVEFYAPWC------GHCQRLTPEWKKAATALKDVVKVGAVNADKHQS----LGGQYGV--QGFPTIKI   95 (130)
T ss_dssp             EEEEEECTTC------STTGGGHHHHHHHHHHTTTTSEEEEEETTTCHH----HHHHHTC--CSSSEEEE
T ss_pred             EEEEEECCCC------HHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHH----HHHHcCC--CccCEEEE
Confidence            3566666665      699877766654    2  28888999988754    4555654  78999976

>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A

Probab=93.02  E-value=0.35  Score=37.47  Aligned_cols=61  Identities=11%  Similarity=0.171  Sum_probs=41.7

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHH-------Hh-CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe---CCEEE
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIF-------RG-FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI---RGKHV  198 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL-------~~-~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI---~G~~I  198 (277)
                      -||.|..+|      |+.|+++...|       +. .++.+..+|++.+.+...++.+.+|-  ..+|.+++   +|+.+
T Consensus        34 vlv~F~a~w------C~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~~~l~~~~~v--~~~Pt~~~~d~~G~~v  105 (134)
T 2fwh_A           34 VMLDLYADW------CVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNV--LGLPTILFFDGQGQEH  105 (134)
T ss_dssp             EEEEEECTT------CHHHHHHHHHTTTSHHHHHHTTTSEEEEEECTTCCHHHHHHHHHTTC--CSSSEEEEECTTSCBC
T ss_pred             EEEEEECCC------CHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCCCCcchHHHHHHHcCC--CCCCEEEEECCCCCEe
Confidence            355566666      58999876443       22 25889999997665556677777775  68999854   56654

>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}

Probab=92.93  E-value=0.16  Score=38.54  Aligned_cols=58  Identities=17%  Similarity=0.189  Sum_probs=35.7

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHH---Hh------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe---CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIF---RG------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI---RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL---~~------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI---~G~~I  198 (277)
                      ||.|+.+|      |+.|++....|   +.      .++.+..+|++.+  ...++.+.+|-  ..+|.+++   +|+.+
T Consensus        31 lv~f~a~w------C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~--~~~~~~~~~~v--~~~Pt~~~~d~~G~~~  100 (130)
T 2kuc_A           31 FVDCFTTW------CGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKG--EGVELRKKYGV--HAYPTLLFINSSGEVV  100 (130)
T ss_dssp             EEEECCTT------CTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSST--THHHHHHHTTC--CSSCEEEEECTTSCEE
T ss_pred             EEEEECCC------CccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCc--chHHHHHHcCC--CCCCEEEEECCCCcEE
Confidence            44555555      57999877666   21      2355666666542  22456666765  68999965   67654

>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}

Probab=92.83  E-value=0.51  Score=35.98  Aligned_cols=58  Identities=26%  Similarity=0.351  Sum_probs=38.7

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHH--h------CCCeEEEEEC---CCCHHHHHHHHHHhCCCC-CCCcEEEe---CC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFR--G------FRVWVDERDV---SMDSAYKKELQCVFGGKN-VTLPQVFI---RG  195 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~--~------~gV~y~ErDV---s~d~~~reELke~lG~~~-~tvPqVFI---~G  195 (277)
                      ||.|+++|      |++|+.....|+  .      .++.+..+|+   +.+.    +|.+.+|-.. ..+|.+++   +|
T Consensus        33 lv~f~a~w------C~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~----~l~~~~~v~~~~~~Pt~~~~d~~G  102 (133)
T 3fk8_A           33 LLVFGANW------CTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNL----ELSQAYGDPIQDGIPAVVVVNSDG  102 (133)
T ss_dssp             EEEEECTT------CHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSH----HHHHHTTCGGGGCSSEEEEECTTS
T ss_pred             EEEEcCCC------CHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchH----HHHHHhCCccCCccceEEEECCCC
Confidence            55566666      579999988888  2      3688889999   4443    4555554200 57898854   78


Q ss_pred             EEE
Q 048504          196 KHV  198 (277)
Q Consensus       196 ~~I  198 (277)
                      +.+
T Consensus       103 ~~~  105 (133)
T 3fk8_A          103 KVR  105 (133)
T ss_dssp             CEE
T ss_pred             CEE
Confidence            766

>1n2a_A Glutathione S-transferase; HET: GTS; 1.90A {Escherichia coli} SCOP: a.45.1.1 c.47.1.5 PDB: 1a0f_A*

Probab=92.56  E-value=0.064  Score=43.99  Aligned_cols=67  Identities=9%  Similarity=0.045  Sum_probs=46.5

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH---HHHHHHHHHhCCCCCCCcEEEe-CCEEEechhHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS---AYKKELQCVFGGKNVTLPQVFI-RGKHVGNADVLKSM  207 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~---~~reELke~lG~~~~tvPqVFI-~G~~IGG~del~~L  207 (277)
                      .||+...      + .|.+|+.+|+..||+|+.+.|+...   ....++.++...  .++|.+.+ ||..|.....+.+.
T Consensus         2 ~Ly~~~~------s-~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~--g~vP~L~~~~g~~l~eS~aI~~y   72 (201)
T 1n2a_A            2 KLFYKPG------A-CSLASHITLRESGKDFTLVSVDLMKKRLENGDDYFAVNPK--GQVPALLLDDGTLLTEGVAIMQY   72 (201)
T ss_dssp             EEEECTT------S-TTHHHHHHHHHTTCCCEEEEEETTTTEETTCCBGGGTCTT--CCSCEEECTTSCEEESHHHHHHH
T ss_pred             eeecCCC------c-chHHHHHHHHHcCCCCeeEEEeCCCccccCCHHHHhhCcC--CCCCeEEecCCcEEecHHHHHHH
Confidence            5787664      3 3899999999999999877765431   112344444433  68999986 77888887776664

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.48  E-value=0.1  Score=40.51  Aligned_cols=38  Identities=24%  Similarity=0.670  Sum_probs=31.1

Q ss_pred             CCCCCCCccceE-----------eCCCCCCcceeeeCCCCcceeCCCCCcCceee
Q 048504          227 FVCGSCGDVRFV-----------PCGNCSGSRKVFDEADGVPKRCLECNENGLIR  270 (277)
Q Consensus       227 ~~C~~CGg~rfV-----------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLvr  270 (277)
                      ..|..|+|.+.+           +|+.|+|.-+++.      .+|+.|+-.|.++
T Consensus        46 ~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i~------~~C~~C~G~G~v~   94 (104)
T 2ctt_A           46 QHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIII------SPCVVCRGAGQAK   94 (104)
T ss_dssp             EECSSSSSSCEEEEEETTEEEEEECSSSSSSSEECS------SCCSSSSSCSEEC
T ss_pred             ccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceECC------CcCCCCCCeeEEE
Confidence            579999988754           7999999988763      5799999998875

>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}

Probab=92.45  E-value=0.83  Score=37.14  Aligned_cols=16  Identities=19%  Similarity=0.468  Sum_probs=13.8

Q ss_pred             CCCcEEEeCCEEE-ech
Q 048504          186 VTLPQVFIRGKHV-GNA  201 (277)
Q Consensus       186 ~tvPqVFI~G~~I-GG~  201 (277)
                      ..+|.++|||+++ +|+
T Consensus       154 ~gtPt~ving~~~~~g~  170 (193)
T 2rem_A          154 VGTPTIVVNGRYMVTGH  170 (193)
T ss_dssp             SSSSEEEETTTEEECCS
T ss_pred             CCCCeEEECCEEEecCC
Confidence            7899999999976 775

>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}

Probab=92.38  E-value=0.86  Score=35.80  Aligned_cols=32  Identities=13%  Similarity=0.262  Sum_probs=20.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C-CCeEEEEECC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F-RVWVDERDVS  168 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~-gV~y~ErDVs  168 (277)
                      ||.|..++      |+.|......|..    + +|.+..++++
T Consensus        41 lv~F~~~~------C~~C~~~~~~l~~l~~~~~~v~vv~i~~d   77 (165)
T 3ha9_A           41 ILWFMAAW------CPSCVYMADLLDRLTEKYREISVIAIDFW   77 (165)
T ss_dssp             EEEEECTT------CTTHHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred             EEEEECCC------CcchhhhHHHHHHHHHHcCCcEEEEEEec
Confidence            44455555      5799866655543    4 6777778877

>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0

Probab=92.31  E-value=0.39  Score=36.55  Aligned_cols=51  Identities=10%  Similarity=0.091  Sum_probs=37.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI  193 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI  193 (277)
                      +|.|+++||      +.|+.....|+.+           .|.+..+|++.+.    +|.+..+-  ..+|.+++
T Consensus        37 lv~F~a~wC------~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~----~l~~~~~v--~~~Pt~~~   98 (127)
T 3h79_A           37 FVLYYVPWS------RHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYP----DVIERMRV--SGFPTMRY   98 (127)
T ss_dssp             EEEEECTTC------HHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCH----HHHHHTTC--CSSSEEEE
T ss_pred             EEEEECCcc------HHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccH----hHHHhcCC--ccCCEEEE
Confidence            566777775      7999988888763           4778899998775    45555654  78998854

>2pvq_A Glutathione S-transferase; xenobiotics detoxification, H-site; HET: GSH; 1.80A {Ochrobactrum anthropi} PDB: 2nto_A*

Probab=92.06  E-value=0.094  Score=42.98  Aligned_cols=68  Identities=10%  Similarity=0.056  Sum_probs=48.2

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHH---HHHHHHHHhCCCCCCCcEEE-eCCEEEechhHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSA---YKKELQCVFGGKNVTLPQVF-IRGKHVGNADVLKSM  207 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~---~reELke~lG~~~~tvPqVF-I~G~~IGG~del~~L  207 (277)
                      +||+...      ++ |.+|+.+|+..||+|+.+.++....   ...++.++...  .++|.+. -||..|.+...+.+.
T Consensus         2 ~Ly~~~~------s~-~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~~P~--g~vP~L~~~~g~~l~eS~aI~~y   72 (201)
T 2pvq_A            2 KLYYKVG------AA-SLAPHIILSEAGLPYELEAVDLKAKKTADGGDYFAVNPR--GAVPALEVKPGTVITQNAAILQY   72 (201)
T ss_dssp             EEEECTT------ST-THHHHHHHHHHTCCCEEEECBTTTTBCTTSCBGGGTCTT--CCSCEEEEETTEEEESHHHHHHH
T ss_pred             eeeeCCC------cc-HHHHHHHHHhcCCCceEEEecccccCCCCCHHHHhhCcC--CCCCEEEeCCCCEEehHHHHHHH
Confidence            5787764      34 8999999999999999888875321   12234444433  6899998 588888887777664


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        73 L   73 (201)
T 2pvq_A           73 I   73 (201)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3h1n_A Probable glutathione S-transferase; APC84167, bordetella bronchisepti structural genomics, PSI-2, protein structure initiative; 1.83A {Bordetella bronchiseptica RB50}

Probab=91.91  E-value=0.17  Score=43.64  Aligned_cols=72  Identities=7%  Similarity=0.026  Sum_probs=51.8

Q ss_pred             cEEEEEec-CCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHH-hCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTS-LRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCV-FGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttS-lcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~-lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      .+.||... .+      +.+.+|+.+|+..||+|+.+.|+.+.....++.+. ..... .||.+..||..|.....+.+.
T Consensus        21 ~~~L~y~~g~~------~~a~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~k~~nP~-kVPvL~d~g~~l~ES~AI~~Y   93 (252)
T 3h1n_A           21 AYDLWYWDGIP------GRGEFVRLALEAGKIPYRDRAREPGEDMLDDMRRRRDTPPF-APPYLVADGMTIAQTANILLF   93 (252)
T ss_dssp             CEEEECCSSSC------TTHHHHHHHHHHHTCCEEEGGGSTTCCHHHHHTSCCSSCCS-SSCEEEETTEEEESHHHHHHH
T ss_pred             ceEEEeCCCCC------cchHHHHHHHHhCCCCceEEeecCchhhHHHHhhccCCCCC-CCCEEEECCEEeecHHHHHHH
Confidence            38888887 45      49999999999999999999887432222332210 01234 899999999999887777664


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        94 L   94 (252)
T 3h1n_A           94 L   94 (252)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10

Probab=91.85  E-value=1.7  Score=33.33  Aligned_cols=40  Identities=10%  Similarity=0.069  Sum_probs=27.2

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhC----CCeEEEEECCCCHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGF----RVWVDERDVSMDSAYKK  175 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~----gV~y~ErDVs~d~~~re  175 (277)
                      -|+.|..++      |+.|......|+.+    +|.+..++++.+++...
T Consensus        45 ~ll~f~~~~------C~~C~~~~~~l~~l~~~~~v~~v~v~~~~~~~~~~   88 (156)
T 1kng_A           45 SLVNVWASW------CVPCHDEAPLLTELGKDKRFQLVGINYKDAADNAR   88 (156)
T ss_dssp             EEEEEECTT------CHHHHHHHHHHHHHTTCTTSEEEEEEESCCHHHHH
T ss_pred             EEEEEEccc------CHhHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHH
Confidence            355556655      58999887777664    38888888876654333

>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13

Probab=91.63  E-value=1.5  Score=35.19  Aligned_cols=20  Identities=10%  Similarity=0.092  Sum_probs=16.6

Q ss_pred             CCCcEEEeCCEEEechhHHH
Q 048504          186 VTLPQVFIRGKHVGNADVLK  205 (277)
Q Consensus       186 ~tvPqVFI~G~~IGG~del~  205 (277)
                      ..+|.+||||+++-|+....
T Consensus       148 ~gtPt~vvng~~~~G~~~~~  167 (175)
T 1z6m_A          148 QFVPTIIIGEYIFDESVTEE  167 (175)
T ss_dssp             CSSCEEEETTEEECTTCCHH
T ss_pred             CCcCeEEECCEEccCCCCHH
Confidence            78999999999998865543

>1pmt_A PMGST, GST B1-1, glutathione transferase; glutathione-conjugating, A putative oxidoreduct; HET: GSH; 2.50A {Proteus mirabilis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pmt_A*

Probab=91.60  E-value=0.091  Score=43.12  Aligned_cols=68  Identities=9%  Similarity=0.083  Sum_probs=46.9

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHH--H-HHHHHHHhCCCCCCCcEEE-eCCEEEechhHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSA--Y-KKELQCVFGGKNVTLPQVF-IRGKHVGNADVLKSM  207 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~--~-reELke~lG~~~~tvPqVF-I~G~~IGG~del~~L  207 (277)
                      .||+...      + .|.+|+.+|+..||+|+.+.|+....  . ..++.++...  .++|.+. .||..|.....+.+.
T Consensus         2 ~Ly~~~~------s-~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~--g~vP~L~~~~g~~l~eS~aI~~y   72 (203)
T 1pmt_A            2 KLYYTPG------S-CSLSPHIVLRETGLDFSIERIDLRTKKTESGKDFLAINPK--GQVPVLQLDNGDILTEGVAIVQY   72 (203)
T ss_dssp             EEEECTT------S-TTHHHHHHHHHTTCCCEEEEEETTTTEETTSCBGGGTCTT--CCSCEEECTTSCEEESHHHHHHH
T ss_pred             eeeccCC------c-chHHHHHHHHHcCCCceEEEeccccccccCCHHHHhcCCC--CCCCeEEecCCcEEeeHHHHHHH
Confidence            5787764      3 38999999999999998776654321  1 2334444433  6899998 677888877777664


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        73 L   73 (203)
T 1pmt_A           73 L   73 (203)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2dsa_A Glutathione S-transferase; HET: GSH HPX; 2.10A {Burkholderia xenovorans} PDB: 2gdr_A*

Probab=91.41  E-value=0.072  Score=43.74  Aligned_cols=67  Identities=12%  Similarity=0.118  Sum_probs=46.3

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH---HHHHHHHHHhCCCCCCCcEEEe-CCEEEechhHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS---AYKKELQCVFGGKNVTLPQVFI-RGKHVGNADVLKSM  207 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~---~~reELke~lG~~~~tvPqVFI-~G~~IGG~del~~L  207 (277)
                      +||+...      + .|.+|+.+|+..||+|+.+.|+...   ....++.++...  .++|.+.+ ||..|.....+.+.
T Consensus         2 ~Ly~~~~------s-~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~~P~--g~vP~L~~~~g~~l~eS~aI~~y   72 (203)
T 2dsa_A            2 KLYYSPG------A-CSLSPHIALREAGLNFELVQVDLASKKTASGQDYLEVNPA--GYVPCLQLDDGRTLTEGPAIVQY   72 (203)
T ss_dssp             EEEECTT------S-TTHHHHHHHHHHTCCCEEEEEETTTTEETTCCBGGGTCTT--CCSCEEECTTSCEEESHHHHHHH
T ss_pred             eeeecCC------c-chHHHHHHHHHcCCCCeEEEEeCCCCcccCCHHHHHhCCC--CCCCEEEecCCcEEecHHHHHHH
Confidence            5787654      2 3899999999999999887775431   111334444432  68999986 77888887777664

>1f2e_A Glutathione S-transferase; GST complexed with glutathione, thioredoxin superfamily fold transferase; HET: GSH; 2.30A {Sphingomonas paucimobilis} SCOP: a.45.1.1 c.47.1.5

Probab=91.26  E-value=0.14  Score=41.90  Aligned_cols=67  Identities=9%  Similarity=0.087  Sum_probs=46.9

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHH-H--HHHHHHHhCCCCCCCcEEE-eCCEEEechhHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSA-Y--KKELQCVFGGKNVTLPQVF-IRGKHVGNADVLKSM  207 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~-~--reELke~lG~~~~tvPqVF-I~G~~IGG~del~~L  207 (277)
                      .||+...       +.|.+|+.+|+.+||+|+.+.++.... .  ..++.+....  .++|.+. .||..|.....+.+.
T Consensus         2 ~Ly~~~~-------~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~~P~--g~vP~L~~~~g~~l~eS~aI~~y   72 (201)
T 1f2e_A            2 KLFISPG-------ACSLAPHIALRETGADFEAVKVDLAVRKTEAGEDFLTVNPS--GKVPALTLDSGETLTENPAILLY   72 (201)
T ss_dssp             EEEECTT-------STTHHHHHHHHHHTCCCEEEEEETTTTEETTSCBHHHHCTT--CCSCEEECTTSCEEESHHHHHHH
T ss_pred             eeeecCC-------ccHHHHHHHHHHcCCCceEEEeecCCCCCCCChHHHccCcC--CCCceEEecCCcEeeHHHHHHHH
Confidence            5777542       479999999999999998776654211 1  1345556543  6899998 478888877776654

>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}

Probab=90.57  E-value=0.039  Score=42.15  Aligned_cols=57  Identities=16%  Similarity=0.209  Sum_probs=33.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHH---Hh----CC--CeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe----CCEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIF---RG----FR--VWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI----RGKH  197 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL---~~----~g--V~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI----~G~~  197 (277)
                      ||.|+.+||      ++|+.....|   ..    ++  +.+..+|++.+  ...++.+.++-  ..+|.+++    +|+.
T Consensus        23 lv~f~a~wC------~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~--~~~~~~~~~~v--~~~Pt~~~~d~~~G~~   92 (130)
T 2lst_A           23 MVYFHSEHC------PYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTP--EGQELARRYRV--PGTPTFVFLVPKAGAW   92 (130)
Confidence            445666664      7999887666   22    22  44555565422  22455555654  68999865    4765

>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A

Probab=91.14  E-value=0.55  Score=39.01  Aligned_cols=55  Identities=16%  Similarity=0.231  Sum_probs=39.9

Q ss_pred             EEEEEec-CCCCCCCChhHHHHHHHHHh-----CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CC
Q 048504          131 IVVYLTS-LRGIRRTFEDCYAVRMIFRG-----FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RG  195 (277)
Q Consensus       131 VVLYttS-lcgiR~Tc~~C~~Vk~iL~~-----~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G  195 (277)
                      |++|+.+ ||      ++|+.++.+|+.     -+|.|..+|++. ++. .++.+.+|-  ..+|.+.+  +|
T Consensus        26 lv~f~~~~~C------~~C~~~~~~~~~la~~~~~v~~~~vd~~~-~~~-~~~~~~~~v--~~~Pt~~~~~~g   88 (226)
T 1a8l_A           26 LIVFVRKDHC------QYCDQLKQLVQELSELTDKLSYEIVDFDT-PEG-KELAKRYRI--DRAPATTITQDG   88 (226)
T ss_dssp             EEEEECSSSC------TTHHHHHHHHHHHHTTCTTEEEEEEETTS-HHH-HHHHHHTTC--CSSSEEEEEETT
T ss_pred             EEEEecCCCC------chhHHHHHHHHHHHhhCCceEEEEEeCCC-ccc-HHHHHHcCC--CcCceEEEEcCC
Confidence            4666666 76      699999999987     358889999875 122 356666765  68999977  55

>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=91.11  E-value=0.13  Score=39.22  Aligned_cols=51  Identities=8%  Similarity=0.286  Sum_probs=33.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh--------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG--------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI  193 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~--------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI  193 (277)
                      ||.|+++|      |+.|+++...|+.        ..|.+..+|++.+..+    .+.++  ...+|.+++
T Consensus        29 lv~f~a~w------C~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~----~~~~~--v~~~Pt~~~   87 (133)
T 2dj3_A           29 LIEFYAPW------CGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDIT----NDQYK--VEGFPTIYF   87 (133)
T ss_dssp             EEEECCTT------CSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCC----CSSCC--CSSSSEEEE
T ss_pred             EEEEECCC------ChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHH----HhhcC--CCcCCEEEE
Confidence            44555555      5799988887765        2477888888766432    22333  378999865

>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}

Probab=91.10  E-value=0.026  Score=42.79  Aligned_cols=56  Identities=16%  Similarity=0.233  Sum_probs=38.1

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C-CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F-RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~-gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+++||      ++|+++...|+.    + +|.|..+|++.+.++    .+.++-  ..+|.+++  +|+.+
T Consensus        40 vv~f~~~~C------~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~----~~~~~v--~~~Pt~~~~~~g~~~  102 (130)
T 1wmj_A           40 IIDFTASWC------GPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEV----AEKYNV--EAMPTFLFIKDGAEA  102 (130)
T ss_dssp             BEECCSSSC------SCSSSSHHHHHHHHHHCTTBCCEECCTTTSGGG----HHHHTC--CSSCCCCBCTTTTCC
T ss_pred             EEEEECCCC------hhHHHHHHHHHHHHHHCCCCEEEEEeccchHHH----HHHcCC--CccceEEEEeCCeEE
Confidence            556666665      688866666554    3 688889998877543    444554  68998877  77654

>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0

Probab=91.06  E-value=2.4  Score=32.82  Aligned_cols=42  Identities=12%  Similarity=-0.013  Sum_probs=27.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-------CCCeEEEEECCCCHHHHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-------FRVWVDERDVSMDSAYKKELQ  178 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-------~gV~y~ErDVs~d~~~reELk  178 (277)
                      ||.|..++      |+.|......|..       .+|.+..++++.+++...++.
T Consensus        38 lv~f~~~~------C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~   86 (165)
T 3or5_A           38 IVNFFATW------CPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYM   86 (165)
T ss_dssp             EEEEECTT------SHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHH
T ss_pred             EEEEEcCc------CHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHH
Confidence            44455554      6899976666654       358888888887765544443

>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A

Probab=90.81  E-value=0.98  Score=36.08  Aligned_cols=56  Identities=14%  Similarity=0.223  Sum_probs=39.1

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----C-CeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE--eCCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----R-VWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF--IRGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----g-V~y~ErDVs~d~~~reELke~lG~~~~tvPqVF--I~G~~I  198 (277)
                      ||.|.++||      +.|+.....|+..     + +.+..+|++.+++    |.+.++-  ..+|.++  -+|+.+
T Consensus        27 lv~F~a~WC------~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~----l~~~~~v--~~~Pt~~~~~~G~~v   90 (149)
T 3gix_A           27 VLRFGRDED------PVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAV----YTQYFDI--SYIPSTVFFFNGQHM   90 (149)
T ss_dssp             EEEEECTTS------HHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCH----HHHHTTC--CSSSEEEEEETTEEE
T ss_pred             EEEEECCCC------HHHHHHHHHHHHHHHHccCceEEEEEECCcCHH----HHHHcCC--CccCeEEEEECCeEE
Confidence            445677775      7999988888752     2 7788899987754    4555654  6788864  477665

>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}

Probab=90.65  E-value=0.69  Score=35.04  Aligned_cols=64  Identities=13%  Similarity=0.142  Sum_probs=38.9

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHH----hC----CCeEEEEECCCCHHHH---------------------HHHHHHh
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFR----GF----RVWVDERDVSMDSAYK---------------------KELQCVF  181 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~----~~----gV~y~ErDVs~d~~~r---------------------eELke~l  181 (277)
                      |+.|..++|      +.|......|.    .+    ++.+..++++.+.+..                     .++.+.+
T Consensus        37 ll~F~~~~C------~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  110 (148)
T 3fkf_A           37 LLNFWASWC------DPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQY  110 (148)
T ss_dssp             EEEEECGGG------CCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHT
T ss_pred             EEEEECCCC------HHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhc
Confidence            455666665      57875554443    33    4777788887665322                     2344555


Q ss_pred             CCCCCCCcEEEe---CCEEEechh
Q 048504          182 GGKNVTLPQVFI---RGKHVGNAD  202 (277)
Q Consensus       182 G~~~~tvPqVFI---~G~~IGG~d  202 (277)
                      |-  ..+|.++|   +|+.++...
T Consensus       111 ~v--~~~P~~~lid~~G~i~~~~~  132 (148)
T 3fkf_A          111 AI--LTLPTNILLSPTGKILARDI  132 (148)
T ss_dssp             TC--CSSSEEEEECTTSBEEEESC
T ss_pred             CC--CCcCEEEEECCCCeEEEecC
Confidence            54  68899764   788777554

>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}

Probab=90.45  E-value=1.4  Score=33.35  Aligned_cols=70  Identities=9%  Similarity=0.133  Sum_probs=40.1

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHH-------hCCCeEEEEECCCCHHHHHH---------------------HHHHhC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFR-------GFRVWVDERDVSMDSAYKKE---------------------LQCVFG  182 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~-------~~gV~y~ErDVs~d~~~reE---------------------Lke~lG  182 (277)
                      |+.|..++|      +.|......|.       ..++.+..++++.+++...+                     +.+..|
T Consensus        35 ll~f~~~~C------~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  108 (148)
T 3hcz_A           35 ILFFWDSQC------GHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD  108 (148)
T ss_dssp             EEEEECGGG------CTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC
T ss_pred             EEEEECCCC------ccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcC
Confidence            445666665      57764443333       34688888888866543222                     333444


Q ss_pred             CCCCCCcEEEe---CCEEEe---chhHHHHHH
Q 048504          183 GKNVTLPQVFI---RGKHVG---NADVLKSMY  208 (277)
Q Consensus       183 ~~~~tvPqVFI---~G~~IG---G~del~~L~  208 (277)
                      -  ..+|.+||   +|+.+.   |.+++.++.
T Consensus       109 i--~~~P~~~lid~~G~i~~~~~g~~~~~~~l  138 (148)
T 3hcz_A          109 I--YATPVLYVLDKNKVIIAKRIGYENLDDFL  138 (148)
T ss_dssp             C--CSSCEEEEECTTCBEEEESCCGGGHHHHH
T ss_pred             c--CCCCEEEEECCCCcEEEecCCHHHHHHHH
Confidence            3  67899875   676653   344444443

>1xg8_A Hypothetical protein SA0798; structural genomics, protein structure initative, MCSG, PSI, protein structure initiative; 2.10A {Staphylococcus aureus subsp} SCOP: c.47.1.17

Probab=90.36  E-value=1  Score=36.26  Aligned_cols=75  Identities=12%  Similarity=0.149  Sum_probs=48.1

Q ss_pred             CcEEEEEecCCCCCCCChhHH------HHHHHHHh--------CCCeEEEEECCCCHH----HHHHHHHHhCCCCCCCcE
Q 048504          129 DRIVVYLTSLRGIRRTFEDCY------AVRMIFRG--------FRVWVDERDVSMDSA----YKKELQCVFGGKNVTLPQ  190 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~------~Vk~iL~~--------~gV~y~ErDVs~d~~----~reELke~lG~~~~tvPq  190 (277)
                      -.|+||....     .|.-|.      ..-.+|+.        ..+.|..+||...++    ..+++.++.-...--.|.
T Consensus         8 v~i~VYGAe~-----iCASCVnaPSSkeTyEWLqAal~RKyp~~~f~~~YIDI~~~~~~l~d~~~~~ae~I~ede~FYPl   82 (111)
T 1xg8_A            8 NAVVVYGADV-----ICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQDELFYPL   82 (111)
T ss_dssp             EEEEEEECSS-----CCGGGSSSCCHHHHHHHHHHHHHHHCTTSCEEEEEEETTTC---CCHHHHHHHHHHHTTSSCSSE
T ss_pred             EEEEEEcccc-----cchhccCCCCchhHHHHHHHHHhCcCCCCceEEEEEeccCCccchhHHHHHHHHHHhhccccceE
Confidence            3589999873     576664      66667764        346688999975533    244555444332366899


Q ss_pred             EEeCCEEEec-hhHHHHHH
Q 048504          191 VFIRGKHVGN-ADVLKSMY  208 (277)
Q Consensus       191 VFI~G~~IGG-~del~~L~  208 (277)
                      |.|+|++||. .-.|+...
T Consensus        83 V~indeiVaEGnp~LK~I~  101 (111)
T 1xg8_A           83 ITMNDEYVADGYIQTKQIT  101 (111)
T ss_dssp             EEETTEEEEESSCCHHHHH
T ss_pred             EEECCEEeecCCccHHHHH
Confidence            9999999974 44444443

>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.32  E-value=0.36  Score=37.33  Aligned_cols=56  Identities=20%  Similarity=0.363  Sum_probs=38.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-------CCCeEEEEECCCCHHHHHHHHHHhCCCCC------CCcEEEe--CC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-------FRVWVDERDVSMDSAYKKELQCVFGGKNV------TLPQVFI--RG  195 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-------~gV~y~ErDVs~d~~~reELke~lG~~~~------tvPqVFI--~G  195 (277)
                      ||.|+++||      +.|+++...|+.       .++.|..+|++.+++    +.+.++-  .      .+|.+++  +|
T Consensus        30 lv~f~a~wC------~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~----~~~~~~v--~~~~~~~~~Pt~~~~~~G   97 (137)
T 2dj0_A           30 IVEFFANWS------NDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTD----VSTRYKV--STSPLTKQLPTLILFQGG   97 (137)
T ss_dssp             EEEECCTTC------STTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHH----HHHHTTC--CCCSSSSCSSEEEEESSS
T ss_pred             EEEEECCCC------HHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHH----HHHHccC--cccCCcCCCCEEEEEECC
Confidence            667777765      699877766654       268888999988754    4445553  4      8999854  67


Q ss_pred             EEE
Q 048504          196 KHV  198 (277)
Q Consensus       196 ~~I  198 (277)
                      +.+
T Consensus        98 ~~~  100 (137)
T 2dj0_A           98 KEA  100 (137)
T ss_dssp             SEE
T ss_pred             EEE
Confidence            644

>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A

Probab=90.30  E-value=0.63  Score=35.18  Aligned_cols=61  Identities=11%  Similarity=0.183  Sum_probs=36.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCC-----CHHHH------------------HHHHHHh
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSM-----DSAYK------------------KELQCVF  181 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~-----d~~~r------------------eELke~l  181 (277)
                      |+.|..++      |+.|.+....|..    +  .+.+..++++.     +++..                  .++.+.+
T Consensus        33 lv~f~~~~------C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  106 (148)
T 2b5x_A           33 LIHFWSIS------CHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAF  106 (148)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHT
T ss_pred             EEEEEcCC------CHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHh
Confidence            55555555      5899876666553    2  28888888764     22111                  1334444


Q ss_pred             CCCCCCCcEEEe---CCEEEe
Q 048504          182 GGKNVTLPQVFI---RGKHVG  199 (277)
Q Consensus       182 G~~~~tvPqVFI---~G~~IG  199 (277)
                      |-  ..+|.+||   +|+.+.
T Consensus       107 ~v--~~~P~~~lid~~G~i~~  125 (148)
T 2b5x_A          107 EN--EYVPAYYVFDKTGQLRH  125 (148)
T ss_dssp             CC--CCSSEEEEECTTCBEEE
T ss_pred             CC--CCCCEEEEECCCCcEEE
Confidence            43  68999976   777654

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=90.16  E-value=0.18  Score=35.46  Aligned_cols=25  Identities=36%  Similarity=0.824  Sum_probs=11.6

Q ss_pred             eCCCCCCcceeeeCCCCcceeCCCCCcCcee
Q 048504          239 PCGNCSGSRKVFDEADGVPKRCLECNENGLI  269 (277)
Q Consensus       239 pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLv  269 (277)
                      +|+.|+|+-+++.      .+|+.|+-.|++
T Consensus        11 ~C~~C~GsG~~i~------~~C~~C~G~G~v   35 (53)
T 3lcz_A           11 TCPNCNGSGREEP------EPCPKCLGKGVI   35 (53)
T ss_dssp             ECTTTTTSCEETT------EECTTTTTSSEE
T ss_pred             cCcCCcccccCCC------CcCCCCCCcEEE
Confidence            4555555544331      345555555544

>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}

Probab=90.12  E-value=1.4  Score=36.10  Aligned_cols=34  Identities=9%  Similarity=0.278  Sum_probs=24.0

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCC
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSM  169 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~  169 (277)
                      .|++|+..+      ||+|.++...|+.    +  +|.|..+++..
T Consensus        28 ~vv~f~d~~------Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~~   67 (195)
T 3hd5_A           28 EVLEFFAYT------CPHCAAIEPMVEDWAKTAPQDVVLKQVPIAF   67 (195)
T ss_dssp             EEEEEECTT------CHHHHHHHHHHHHHHHTCCTTEEEEEEECCS
T ss_pred             EEEEEECCC------CccHHHhhHHHHHHHHHCCCCeEEEEEeccc
Confidence            477777766      5899987766654    3  47788888863

>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}

Probab=90.00  E-value=1.3  Score=33.89  Aligned_cols=61  Identities=7%  Similarity=0.098  Sum_probs=36.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHH----HhC---CCeEEEEECCCCHHHHH-------------------HHHHHhCCC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIF----RGF---RVWVDERDVSMDSAYKK-------------------ELQCVFGGK  184 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL----~~~---gV~y~ErDVs~d~~~re-------------------ELke~lG~~  184 (277)
                      |+.|..++      |+.|......|    +.+   ++.+..++++.+.+...                   ++.+.+|. 
T Consensus        34 lv~f~~~~------C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v-  106 (152)
T 2lja_A           34 YIDVWATW------CGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLI-  106 (152)
T ss_dssp             EEEECCSS------CCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTC-
T ss_pred             EEEEECCc------CHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCc-
Confidence            44455555      56887544433    333   57788888877653222                   34445543 


Q ss_pred             CCCCcEEEe---CCEEEe
Q 048504          185 NVTLPQVFI---RGKHVG  199 (277)
Q Consensus       185 ~~tvPqVFI---~G~~IG  199 (277)
                       ..+|.+||   +|+.+.
T Consensus       107 -~~~P~~~lid~~G~i~~  123 (152)
T 2lja_A          107 -NGIPRFILLDRDGKIIS  123 (152)
T ss_dssp             -CSSCCEEEECTTSCEEE
T ss_pred             -CCCCEEEEECCCCeEEE
Confidence             67898876   677665

>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10

Probab=89.63  E-value=2.4  Score=32.22  Aligned_cols=62  Identities=16%  Similarity=0.222  Sum_probs=38.7

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh--------CCCeEEEEECCCCHH--------------------HHHHHHHHhC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG--------FRVWVDERDVSMDSA--------------------YKKELQCVFG  182 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~--------~gV~y~ErDVs~d~~--------------------~reELke~lG  182 (277)
                      |+.|..++      |+.|......|..        .++.+..++++.+.+                    ...++.+.+|
T Consensus        32 ll~F~a~w------C~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (144)
T 1o73_A           32 FLYFSASW------CPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFG  105 (144)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHT
T ss_pred             EEEEECcC------CHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcC
Confidence            44455554      6899876666553        367788888876542                    2345566666


Q ss_pred             CCCCCCcEEEe----CCEEEec
Q 048504          183 GKNVTLPQVFI----RGKHVGN  200 (277)
Q Consensus       183 ~~~~tvPqVFI----~G~~IGG  200 (277)
                      -  ..+|.+||    +|+.+.-
T Consensus       106 v--~~~Pt~~lid~~~G~i~~~  125 (144)
T 1o73_A          106 V--ESIPTLITINADTGAIIGT  125 (144)
T ss_dssp             C--CSSSEEEEEETTTCCEEES
T ss_pred             C--CCCCEEEEEECCCCeEEec
Confidence            4  67898864    4776643

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=89.57  E-value=1.5  Score=36.42  Aligned_cols=56  Identities=18%  Similarity=0.265  Sum_probs=39.9

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEE
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKH  197 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~  197 (277)
                      -||.|+++|      |+.|..+...|+.    +  .|.+..+|++.++    +|.+.++-  ..+|.+++  +|+.
T Consensus       117 vlv~F~a~w------C~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~----~l~~~~~v--~~~Pt~~~~~~G~~  180 (210)
T 3apq_A          117 WFVNFYSPG------CSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDR----MLCRMKGV--NSYPSLFIFRSGMA  180 (210)
T ss_dssp             EEEEEECTT------CHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCH----HHHHHTTC--CSSSEEEEECTTSC
T ss_pred             EEEEEeCCC------ChhHHHHHHHHHHHHHHhcCceEEEEEECCccH----HHHHHcCC--CcCCeEEEEECCCc
Confidence            356666666      5799988877765    2  3788899998875    45555664  78999876  6753

>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}

Probab=89.56  E-value=1.5  Score=33.56  Aligned_cols=82  Identities=12%  Similarity=0.180  Sum_probs=44.1

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-------CCCeEEEEECCCCH-H-HH-----------------HHHHHHhCCC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-------FRVWVDERDVSMDS-A-YK-----------------KELQCVFGGK  184 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-------~gV~y~ErDVs~d~-~-~r-----------------eELke~lG~~  184 (277)
                      |+.|..++      |+.|......|..       .++.+..++++.|. + ++                 .++.+.+|- 
T Consensus        32 lv~f~~~~------C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i-  104 (153)
T 2l5o_A           32 LINFWFPS------CPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGT-  104 (153)
T ss_dssp             EEEEECTT------CTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTC-
T ss_pred             EEEEECCC------CccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCC-
Confidence            45555555      5789865555443       35777777654332 1 11                 134444543 


Q ss_pred             CCCCcEEEe---CCEEE---echhHHHHHHhhccHHHHhcCCCC
Q 048504          185 NVTLPQVFI---RGKHV---GNADVLKSMYETGELARVLDGFPR  222 (277)
Q Consensus       185 ~~tvPqVFI---~G~~I---GG~del~~L~EsGeL~klL~~~~~  222 (277)
                       ..+|.+||   +|+.+   .|..+..+|.+  .|+++|+....
T Consensus       105 -~~~P~~~lid~~G~i~~~~~g~~~~~~l~~--~l~~ll~~~~~  145 (153)
T 2l5o_A          105 -QVYPTSVLIGKKGEILKTYVGEPDFGKLYQ--EIDTAWRNSDA  145 (153)
T ss_dssp             -CSSSEEEEECSSSCCCEEEESSCCHHHHHH--HHHHHHHCCSS
T ss_pred             -CccCeEEEECCCCcEEEEEcCCCCHHHHHH--HHHHHHHhhhh
Confidence             67899876   67642   33333344433  36777765443

>3ppu_A Glutathione-S-transferase; GST fold; HET: GSH; 2.30A {Phanerochaete chrysosporium}

Probab=89.39  E-value=1.5  Score=40.85  Aligned_cols=80  Identities=11%  Similarity=0.032  Sum_probs=53.7

Q ss_pred             CCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCe----EEEEECCCC-----------------------HHHHHH
Q 048504          124 LPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVW----VDERDVSMD-----------------------SAYKKE  176 (277)
Q Consensus       124 ~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~----y~ErDVs~d-----------------------~~~reE  176 (277)
                      -|...++..||....      ||+|++|+.+|.-+|++    +..++..++                       ....++
T Consensus        71 ~~~e~gry~Ly~s~~------CP~a~Rv~i~l~lKGL~~~I~v~~v~~~~~~~gW~f~~~~~~~g~~~d~~~~~e~~~~~  144 (352)
T 3ppu_A           71 FTPEKGRYHLYVSYA------CPWATRTLIVRKLKGLEDFIGVTVVSPRMGSNGWPFANVDPFPAADSDPLNNAQHVKDL  144 (352)
T ss_dssp             SCCCTTSEEEEECSS------CHHHHHHHHHHHHTTCTTTSEEEECCSCCBTTBSBCTTTSCCTTCCCCTTTCCSBHHHH
T ss_pred             CCCCCCcEEEEEeCC------CchHHHHHHHHHHcCCCceeEEEEecCCCCCCCceeccccccCCCCcCcccccccchHH
Confidence            356788999999875      69999999999999985    444443321                       113456


Q ss_pred             HHHHhCC--CCCCCcEEEe---CCEEEechhHHHHHHh
Q 048504          177 LQCVFGG--KNVTLPQVFI---RGKHVGNADVLKSMYE  209 (277)
Q Consensus       177 Lke~lG~--~~~tvPqVFI---~G~~IGG~del~~L~E  209 (277)
                      +.++...  ...+||.|..   ++..+.....+.++.+
T Consensus       145 y~~~nP~g~gr~kVPvL~d~~~g~~vl~ES~aI~~YL~  182 (352)
T 3ppu_A          145 YLKVKPDYDGRFTVPVLWDKHTGTIVNNESSEIIRMFN  182 (352)
T ss_dssp             HHHHCTTCCSCCCSCEEEETTTTEEEECCHHHHHHHHH
T ss_pred             HHHhCCCCCCCeeeeEEEEeCCCCEEEecHHHHHHHHH
Confidence            6666422  1148999998   4456777777766543

>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0

Probab=89.22  E-value=2.1  Score=34.86  Aligned_cols=33  Identities=15%  Similarity=0.102  Sum_probs=22.1

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECC
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVS  168 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs  168 (277)
                      .|+.|+..+      ||+|......|..    +  +|.|..+.+.
T Consensus        28 ~i~~f~d~~------Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~   66 (192)
T 3h93_A           28 EVVELFWYG------CPHCYAFEPTIVPWSEKLPADVHFVRLPAL   66 (192)
T ss_dssp             EEEEEECTT------CHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred             EEEEEECCC------ChhHHHhhHHHHHHHHhCCCCeEEEEEehh
Confidence            477777765      5899977776654    3  3556666653

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=89.07  E-value=0.18  Score=44.98  Aligned_cols=48  Identities=27%  Similarity=0.664  Sum_probs=25.3

Q ss_pred             CCCCCCccc-----eEeCCCCCCcceeeeCC-CC-----cceeCCCCCcCc-----eeeCCCCC
Q 048504          228 VCGSCGDVR-----FVPCGNCSGSRKVFDEA-DG-----VPKRCLECNENG-----LIRCPDCC  275 (277)
Q Consensus       228 ~C~~CGg~r-----fVpC~~C~GS~Kv~~~~-~~-----~~~rC~~CNEnG-----LvrCp~C~  275 (277)
                      .|..|.|.+     ...|+.|+|+-.+.... .+     ....|+.|+-.|     -.+|+.|.
T Consensus        40 ~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~~~~C~~C~  103 (248)
T 1nlt_A           40 LCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCN  103 (248)
T ss_dssp             ECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCTTSBCSSST
T ss_pred             eCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEeccCCCCcccC
Confidence            566665554     35577777765442111 01     234577776666     33466663

>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}

Probab=89.03  E-value=1.2  Score=37.65  Aligned_cols=56  Identities=13%  Similarity=0.333  Sum_probs=39.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+++|      |+.|+.....|+.    +  .+.+..+|++.++.+    .+.++-  ..+|.+++  +|+.+
T Consensus        34 vv~F~a~w------C~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l----~~~~~v--~~~Pt~~~~~~G~~~   97 (222)
T 3dxb_A           34 LVDFWAEW------CGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT----APKYGI--RGIPTLLLFKNGEVA   97 (222)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTT----GGGGTC--CSBSEEEEEETTEEE
T ss_pred             EEEEECCc------CHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHH----HHHcCC--CcCCEEEEEECCeEE
Confidence            45566666      4799988877764    2  388899999887643    344554  78999876  88654

>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*

Probab=88.86  E-value=0.62  Score=40.35  Aligned_cols=56  Identities=16%  Similarity=0.444  Sum_probs=39.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ||.|+.+||      +.|+...-.|+..      .|.|..+|++.++    ++.+..|-  ..+|.+++  +|+.|
T Consensus        30 ~v~f~a~wC------~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~----~~~~~~~v--~~~Pt~~~~~~G~~~   93 (287)
T 3qou_A           30 LFYFWSERS------QHCLQLTPILESLAAQYNGQFILAKLDCDAEQ----MIAAQFGL--RAIPTVYLFQNGQPV   93 (287)
T ss_dssp             EEEEECTTC------TTTTTTHHHHHHHHHHHTSSSEEEEEETTTCH----HHHHTTTC--CSSSEEEEEETTEEE
T ss_pred             EEEEECCCC------hHHHHHHHHHHHHHHHcCCCeEEEEEeCccCH----HHHHHcCC--CCCCeEEEEECCEEE
Confidence            666777776      6898766666542      3889999999875    44555654  78999855  88654

>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}

Probab=88.77  E-value=1.6  Score=33.07  Aligned_cols=66  Identities=6%  Similarity=0.021  Sum_probs=38.9

Q ss_pred             cEEE-EEecCCCCCCCChhHHHH----------HHHHHhCCCeEEEEECCCCHHHHHHHHHHhC----------------
Q 048504          130 RIVV-YLTSLRGIRRTFEDCYAV----------RMIFRGFRVWVDERDVSMDSAYKKELQCVFG----------------  182 (277)
Q Consensus       130 kVVL-YttSlcgiR~Tc~~C~~V----------k~iL~~~gV~y~ErDVs~d~~~reELke~lG----------------  182 (277)
                      .|+| |..+|      |+.|...          ...+...++.+.-++++.+.+...++.+..+                
T Consensus        29 ~vll~F~a~~------C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  102 (142)
T 3ewl_A           29 YTMLFFYDPD------CSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTR  102 (142)
T ss_dssp             EEEEEECCSS------CHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHT
T ss_pred             EEEEEEECCC------CccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhH
Confidence            4555 44554      5899874          3334456788988988876554333322111                


Q ss_pred             --CCCCCCcEEEe---CCEEEech
Q 048504          183 --GKNVTLPQVFI---RGKHVGNA  201 (277)
Q Consensus       183 --~~~~tvPqVFI---~G~~IGG~  201 (277)
                        -+...+|.+||   +|+.+.+.
T Consensus       103 ~~~~v~~~P~~~lid~~G~i~~~~  126 (142)
T 3ewl_A          103 QLYDIRATPTIYLLDGRKRVILKD  126 (142)
T ss_dssp             TCSCCCSSSEEEEECTTCBEEECS
T ss_pred             HHcCCCCCCeEEEECCCCCEEecC
Confidence              12367898754   57777653

>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1

Probab=88.46  E-value=0.31  Score=37.51  Aligned_cols=46  Identities=13%  Similarity=0.335  Sum_probs=33.1

Q ss_pred             hHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          147 DCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       147 ~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      .|+.+...|+..      ++.+..+|++.+++    +.+..|-  ..+|.+++  +|+.+
T Consensus        49 ~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~----l~~~~~v--~~~Pt~~~~~~G~~~  102 (123)
T 1oaz_A           49 PCKMIAPILDEIADEYQGKLTVAKLNIDQNPG----TAPKYGI--RGIPTLLLFKNGEVA  102 (123)
T ss_dssp             CCCTTHHHHTTC-------CEEEEEETTSCTT----TGGGGTC--CBSSEEEEEESSSEE
T ss_pred             CcHHHHHHHHHHHHHhcCCeEEEEEECCCCHH----HHHHcCC--CccCEEEEEECCEEE
Confidence            998888888753      47788999988754    3444554  68999976  88754

>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A

Probab=88.21  E-value=0.41  Score=38.60  Aligned_cols=59  Identities=17%  Similarity=0.218  Sum_probs=32.4

Q ss_pred             cEEEEE-ecCCCCCCCChhHHHHHHHHHh----C-CCe--EEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          130 RIVVYL-TSLRGIRRTFEDCYAVRMIFRG----F-RVW--VDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       130 kVVLYt-tSlcgiR~Tc~~C~~Vk~iL~~----~-gV~--y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      .++||+ ..++    .|+.|+.+.-+|+.    + +|.  |..+|++.+    .+|.+.+|-  ..+|.+++  +|+.+
T Consensus        36 ~~vv~f~~~~~----~C~~C~~l~P~l~~la~~~~~v~~~~~~Vd~d~~----~~la~~~~V--~~iPT~~~fk~G~~v  104 (142)
T 2es7_A           36 DGVILLSSDPR----RTPEVSDNPVMIAELLREFPQFDWQVAVADLEQS----EAIGDRFNV--RRFPATLVFTDGKLR  104 (142)
T ss_dssp             SEEEEECCCSC----C----CCHHHHHHHHHHTCTTSCCEEEEECHHHH----HHHHHTTTC--CSSSEEEEESCC---
T ss_pred             CEEEEEECCCC----CCccHHHHHHHHHHHHHHhcccceeEEEEECCCC----HHHHHhcCC--CcCCeEEEEeCCEEE
Confidence            355554 4443    37789877766654    2 477  778887643    345556654  78999855  77644

>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6

Probab=88.17  E-value=0.37  Score=41.62  Aligned_cols=78  Identities=14%  Similarity=0.165  Sum_probs=46.7

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-----CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE--eCCEEEechhH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-----FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF--IRGKHVGNADV  203 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-----~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF--I~G~~IGG~de  203 (277)
                      ||.|+.+|      |+.|+.+..+|+.     ..|.|..+|++ ++    ++.+.++  ...+|.|+  -+|+.++-+.-
T Consensus       124 vV~F~a~w------C~~C~~l~p~l~~la~~~~~v~f~~vd~~-~~----~l~~~~~--i~~~PTl~~~~~G~~v~~~~G  190 (217)
T 2trc_P          124 VVNIYEDG------VRGCDALNSSLECLAAEYPMVKFCKIRAS-NT----GAGDRFS--SDVLPTLLVYKGGELISNFIS  190 (217)
T ss_dssp             EEEEECTT------STTHHHHHHHHHHHHTTCTTSEEEEEEHH-HH----TCSTTSC--GGGCSEEEEEETTEEEEEETT
T ss_pred             EEEEECCC------CccHHHHHHHHHHHHHHCCCeEEEEEECC-cH----HHHHHCC--CCCCCEEEEEECCEEEEEEeC
Confidence            55566666      4799999988876     25788888886 22    2333343  36899764  48877643322


Q ss_pred             HHHHH----hhccHHHHhcCCC
Q 048504          204 LKSMY----ETGELARVLDGFP  221 (277)
Q Consensus       204 l~~L~----EsGeL~klL~~~~  221 (277)
                      +..+.    ...+|.++|...+
T Consensus       191 ~~~~~g~~~~~~~Le~~L~~~g  212 (217)
T 2trc_P          191 VAEQFAEDFFAADVESFLNEYG  212 (217)
T ss_dssp             GGGGSCSSCCHHHHHHHHHTTT
T ss_pred             CcccCcccCCHHHHHHHHHHcC
Confidence            22210    0135777776544

>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A

Probab=88.12  E-value=2.1  Score=37.02  Aligned_cols=34  Identities=12%  Similarity=0.046  Sum_probs=23.3

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHH----HHhCCCeEEEEECC
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMI----FRGFRVWVDERDVS  168 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~i----L~~~gV~y~ErDVs  168 (277)
                      ..|++|+-.+      ||+|++....    ++.-+|.|..+++.
T Consensus        99 ~~v~~F~D~~------Cp~C~~~~~~l~~~~~~g~v~v~~~~~p  136 (241)
T 1v58_A           99 VIVYVFADPF------CPYCKQFWQQARPWVDSGKVQLRTLLVG  136 (241)
T ss_dssp             EEEEEEECTT------CHHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred             eEEEEEECCC------ChhHHHHHHHHHHHHhCCcEEEEEEECC
Confidence            3577777765      5899987544    44445888877773

>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}

Probab=88.06  E-value=2  Score=32.88  Aligned_cols=38  Identities=5%  Similarity=-0.014  Sum_probs=23.9

Q ss_pred             CcEEEE-EecCCCCCCCChhHHHHHHHHHh----------CCCeEEEEECCCCHH
Q 048504          129 DRIVVY-LTSLRGIRRTFEDCYAVRMIFRG----------FRVWVDERDVSMDSA  172 (277)
Q Consensus       129 ~kVVLY-ttSlcgiR~Tc~~C~~Vk~iL~~----------~gV~y~ErDVs~d~~  172 (277)
                      ..|+|| ..+|      |+.|......|..          .++.+.-++++.+.+
T Consensus        32 k~vll~F~a~w------C~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~   80 (142)
T 3eur_A           32 EYTLLFINNPG------CHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELD   80 (142)
T ss_dssp             SEEEEEECCSS------SHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHH
T ss_pred             CEEEEEEECCC------CccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHH
Confidence            345554 4444      5899765444443          578888888877644

>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}

Probab=87.97  E-value=6.1  Score=31.49  Aligned_cols=38  Identities=8%  Similarity=-0.106  Sum_probs=23.6

Q ss_pred             CChhHHHHHHHHH-------hCCC------eEEEEECCC-CHHHHHHHHHHh
Q 048504          144 TFEDCYAVRMIFR-------GFRV------WVDERDVSM-DSAYKKELQCVF  181 (277)
Q Consensus       144 Tc~~C~~Vk~iL~-------~~gV------~y~ErDVs~-d~~~reELke~l  181 (277)
                      .|+.|......|+       ..++      .+.-++++. +++..+++.+..
T Consensus        70 ~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~  121 (183)
T 3lwa_A           70 WCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDN  121 (183)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHT
T ss_pred             cCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHc
Confidence            3589986554443       4568      888899987 565555554443

>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A

Probab=87.73  E-value=2.2  Score=34.71  Aligned_cols=16  Identities=31%  Similarity=0.304  Sum_probs=13.5

Q ss_pred             CCCcEEEeCCEE-Eech
Q 048504          186 VTLPQVFIRGKH-VGNA  201 (277)
Q Consensus       186 ~tvPqVFI~G~~-IGG~  201 (277)
                      ..+|.++|||++ |.|.
T Consensus       149 ~gtPt~ving~~~~~g~  165 (195)
T 2znm_A          149 DSTPTVIVGGKYRVIFN  165 (195)
T ss_dssp             CSSSEEEETTTEEECCC
T ss_pred             CCCCeEEECCEEEEcCC
Confidence            789999999996 7664

>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A

Probab=87.10  E-value=1.9  Score=35.78  Aligned_cols=56  Identities=18%  Similarity=0.293  Sum_probs=39.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-------C--CeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-------R--VWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-------g--V~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      +|.|+.+|      |+.|+.....|+.+       +  |.+..+|++.+.    +|.+.+|-  ..+|.+++  +|+.+
T Consensus        36 ~v~F~a~w------C~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~----~l~~~~~v--~~~Pt~~~~~~g~~~  102 (241)
T 3idv_A           36 LLEFYAPW------CGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSAS----VLASRFDV--SGYPTIKILKKGQAV  102 (241)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCH----HHHHHTTC--CSSSEEEEEETTEEE
T ss_pred             EEEEECCC------CHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCH----HHHHhcCC--CcCCEEEEEcCCCcc
Confidence            55566666      57999887776642       2  889999998875    45556664  78999854  67655

>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A

Probab=87.06  E-value=0.69  Score=34.31  Aligned_cols=49  Identities=12%  Similarity=0.275  Sum_probs=34.4

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhC-----------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGF-----------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI  193 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI  193 (277)
                      -||.|+++||      +.|++....|+..           +|.+..+|++.++     +.+  +  ...+|.+++
T Consensus        28 vlv~f~a~wC------~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-----~~~--~--v~~~Pt~~~   87 (121)
T 2djj_A           28 VLIEFYAPWC------GHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-----VPD--E--IQGFPTIKL   87 (121)
T ss_dssp             EEEEEECSSC------TTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-----CSS--C--CSSSSEEEE
T ss_pred             EEEEEECCCC------HhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-----ccc--c--cCcCCeEEE
Confidence            3566666665      7999888777642           5889999998764     222  3  478999865

>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A

Probab=86.83  E-value=2.1  Score=34.39  Aligned_cols=51  Identities=16%  Similarity=0.191  Sum_probs=38.0

Q ss_pred             HHHHHHHhCCCeEEEEECCCCHHHH------HHHHHHhCCCCCCCcEEEeCCEEE--echh
Q 048504          150 AVRMIFRGFRVWVDERDVSMDSAYK------KELQCVFGGKNVTLPQVFIRGKHV--GNAD  202 (277)
Q Consensus       150 ~Vk~iL~~~gV~y~ErDVs~d~~~r------eELke~lG~~~~tvPqVFI~G~~I--GG~d  202 (277)
                      .+-.+|+.+||.++-.++..++...      .++.+..|.  ..+|.++|||+.+  |-|=
T Consensus        31 ~~~~~lk~~Gi~V~RyNL~~~P~aF~~N~~V~~~L~~~G~--~~LP~~~VDGevv~~G~yP   89 (110)
T 3kgk_A           31 TDVQWLKQSGVQIERFNLAQQPMSFVQNEKVKAFIEASGA--EGLPLLLLDGETVMAGRYP   89 (110)
T ss_dssp             HHHHHHHHHTCCEEEEETTTCTTHHHHSHHHHHHHHHHCG--GGCCEEEETTEEEEESSCC
T ss_pred             HHHHHHHHCCCeEEEEccccChHHHhcCHHHHHHHHHcCc--ccCCEEEECCEEEEeccCC
Confidence            5577888899999999999987522      233344465  7899999999976  5553

>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}

Probab=86.66  E-value=5.7  Score=30.22  Aligned_cols=60  Identities=13%  Similarity=0.160  Sum_probs=36.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-------CCCeEEEEECCCCHHHHH------------------HHHHHhCCCC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-------FRVWVDERDVSMDSAYKK------------------ELQCVFGGKN  185 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-------~gV~y~ErDVs~d~~~re------------------ELke~lG~~~  185 (277)
                      |+.|..++      |+.|......|..       .++.+..++++.+.+...                  ++.+.+|-  
T Consensus        32 ll~f~~~~------C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v--  103 (152)
T 3gl3_A           32 YLDFWASW------CGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGV--  103 (152)
T ss_dssp             EEEEECTT------CTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTC--
T ss_pred             EEEEECCc------CHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCC--
Confidence            34455555      5799866555543       468888888887654332                  34444554  


Q ss_pred             CCCcEE-Ee--CCEEE
Q 048504          186 VTLPQV-FI--RGKHV  198 (277)
Q Consensus       186 ~tvPqV-FI--~G~~I  198 (277)
                      ..+|.+ +|  +|+.+
T Consensus       104 ~~~P~~~lid~~G~i~  119 (152)
T 3gl3_A          104 KGMPTSFLIDRNGKVL  119 (152)
T ss_dssp             CSSSEEEEECTTSBEE
T ss_pred             CCCCeEEEECCCCCEE
Confidence            679995 55  56533

>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}

Probab=86.49  E-value=4.2  Score=31.79  Aligned_cols=54  Identities=15%  Similarity=0.181  Sum_probs=34.5

Q ss_pred             ChhHHHHHHHHH-------hCCCeEEEEECCCCHHHHHH-------------------HHHHhCCCCCCCcEEEe---CC
Q 048504          145 FEDCYAVRMIFR-------GFRVWVDERDVSMDSAYKKE-------------------LQCVFGGKNVTLPQVFI---RG  195 (277)
Q Consensus       145 c~~C~~Vk~iL~-------~~gV~y~ErDVs~d~~~reE-------------------Lke~lG~~~~tvPqVFI---~G  195 (277)
                      |+.|......|.       ..++.+.-++++.+.+..++                   +.+.+|.  ..+|.+||   +|
T Consensus        47 C~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v--~~~P~~~lid~~G  124 (152)
T 2lrt_A           47 NAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNV--TNLPSVFLVNRNN  124 (152)
T ss_dssp             CHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTC--CSCSEEEEEETTT
T ss_pred             ChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCc--ccCceEEEECCCC
Confidence            689986444333       34688888888877543222                   5555654  57898865   68


Q ss_pred             EEEec
Q 048504          196 KHVGN  200 (277)
Q Consensus       196 ~~IGG  200 (277)
                      +.+.-
T Consensus       125 ~i~~~  129 (152)
T 2lrt_A          125 ELSAR  129 (152)
T ss_dssp             EEEEE
T ss_pred             eEEEe
Confidence            76643

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=86.39  E-value=0.37  Score=42.99  Aligned_cols=40  Identities=28%  Similarity=0.669  Sum_probs=31.0

Q ss_pred             CCCCCCCccceE---------------eCCCCCCcceeeeCCCCcceeCCCCCcCceee
Q 048504          227 FVCGSCGDVRFV---------------PCGNCSGSRKVFDEADGVPKRCLECNENGLIR  270 (277)
Q Consensus       227 ~~C~~CGg~rfV---------------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLvr  270 (277)
                      ..|..|+|.+.+               +|+.|+|.-+++..    ..+|+.|+-.|.++
T Consensus        55 ~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~----~~~C~~C~G~g~~~  109 (248)
T 1nlt_A           55 KKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDP----KDRCKSCNGKKVEN  109 (248)
T ss_dssp             CCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCT----TSBCSSSTTSCEEE
T ss_pred             ccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEecc----CCCCcccCCCceEe
Confidence            689999887643               59999999877642    35899999888764

>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=86.37  E-value=0.21  Score=39.20  Aligned_cols=53  Identities=19%  Similarity=0.254  Sum_probs=34.6

Q ss_pred             cEEE-EEecCCCCCCCChhHHHHHHHHHh----C-CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEE
Q 048504          130 RIVV-YLTSLRGIRRTFEDCYAVRMIFRG----F-RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKH  197 (277)
Q Consensus       130 kVVL-YttSlcgiR~Tc~~C~~Vk~iL~~----~-gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~  197 (277)
                      .|+| |+.+|      |+.|+.+...|+.    + +|.|..+|++...       +.++  ...+|.+++  +|+.
T Consensus        32 ~vvv~f~a~w------C~~C~~~~p~l~~la~~~~~v~~~~vd~~~~~-------~~~~--i~~~Pt~~~~~~G~~   92 (135)
T 2dbc_A           32 WVVIHLYRSS------VPMCLVVNQHLSVLARKFPETKFVKAIVNSCI-------EHYH--DNCLPTIFVYKNGQI   92 (135)
T ss_dssp             EEEEEECCTT------CHHHHHHHHHHHHHHHHCSSEEEEEECCSSSC-------SSCC--SSCCSEEEEESSSSC
T ss_pred             EEEEEEECCC------ChHHHHHHHHHHHHHHHCCCcEEEEEEhhcCc-------ccCC--CCCCCEEEEEECCEE
Confidence            4555 55555      5899988887765    2 4777888887653       2333  378999744  6753

>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A

Probab=86.23  E-value=2.6  Score=32.11  Aligned_cols=53  Identities=11%  Similarity=-0.009  Sum_probs=34.0

Q ss_pred             ChhHHHHHHHHHh--------CCCeEEEEECCCCHH--------------------HHHHHHHHhCCCCCCCcEEE-e--
Q 048504          145 FEDCYAVRMIFRG--------FRVWVDERDVSMDSA--------------------YKKELQCVFGGKNVTLPQVF-I--  193 (277)
Q Consensus       145 c~~C~~Vk~iL~~--------~gV~y~ErDVs~d~~--------------------~reELke~lG~~~~tvPqVF-I--  193 (277)
                      |+.|......|..        .++.+..++++.+.+                    ...++.+.+|.  ..+|.+| |  
T Consensus        40 C~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v--~~~P~~~lid~  117 (144)
T 1i5g_A           40 CPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV--KSIPTLVGVEA  117 (144)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC--CSSSEEEEEET
T ss_pred             CHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC--CCCCEEEEEEC
Confidence            6899876655543        367788888876542                    23455666654  6789875 4  


Q ss_pred             -CCEEEe
Q 048504          194 -RGKHVG  199 (277)
Q Consensus       194 -~G~~IG  199 (277)
                       +|+.+.
T Consensus       118 ~~G~i~~  124 (144)
T 1i5g_A          118 DSGNIIT  124 (144)
T ss_dssp             TTCCEEE
T ss_pred             CCCcEEe
Confidence             477664

>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}

Probab=85.71  E-value=0.72  Score=36.16  Aligned_cols=78  Identities=13%  Similarity=0.092  Sum_probs=48.6

Q ss_pred             cEEE-EEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEEech
Q 048504          130 RIVV-YLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHVGNA  201 (277)
Q Consensus       130 kVVL-YttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~IGG~  201 (277)
                      .|+| |+.+|      |+.|+.+..+|+.+     ++.|..+|++..       .+.++  ...+|.+  |-+|+.|+-.
T Consensus        25 ~vvv~F~a~w------c~~C~~~~p~l~~la~~~~~v~f~kvd~d~~-------~~~~~--v~~~PT~~~fk~G~~v~~~   89 (118)
T 3evi_A           25 WVIIHLYRSS------IPMCLLVNQHLSLLARKFPETKFVKAIVNSC-------IQHYH--DNCLPTIFVYKNGQIEAKF   89 (118)
T ss_dssp             EEEEEEECTT------SHHHHHHHHHHHHHHHHCTTSEEEEEEGGGT-------STTCC--GGGCSEEEEEETTEEEEEE
T ss_pred             eEEEEEeCCC------ChHHHHHHHHHHHHHHHCCCCEEEEEEhHHh-------HHHCC--CCCCCEEEEEECCEEEEEE
Confidence            4555 55665      57999999888763     588999998753       12333  3789987  5688765433


Q ss_pred             hHHHHH----HhhccHHHHhcCCCC
Q 048504          202 DVLKSM----YETGELARVLDGFPR  222 (277)
Q Consensus       202 del~~L----~EsGeL~klL~~~~~  222 (277)
                      .-+..+    ....+|+.+|...+.
T Consensus        90 ~G~~~~gg~~~~~~~le~~L~~~g~  114 (118)
T 3evi_A           90 IGIIECGGINLKLEELEWKLAEVGA  114 (118)
T ss_dssp             ESTTTTTCSSCCHHHHHHHHHTTTS
T ss_pred             eChhhhCCCCCCHHHHHHHHHHcCC
Confidence            222211    123467777765443

>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}

Probab=85.67  E-value=3.8  Score=32.63  Aligned_cols=72  Identities=10%  Similarity=0.098  Sum_probs=46.9

Q ss_pred             CCcEEEEEecCCCCCCCC---h-----hHHHHHHHHHhCCCeEEEEECCCCHHHH------HHHHHHhCCCCCCCcEEEe
Q 048504          128 EDRIVVYLTSLRGIRRTF---E-----DCYAVRMIFRGFRVWVDERDVSMDSAYK------KELQCVFGGKNVTLPQVFI  193 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc---~-----~C~~Vk~iL~~~gV~y~ErDVs~d~~~r------eELke~lG~~~~tvPqVFI  193 (277)
                      +.+|.||--.+|=.=-.|   .     .=..+-.+|+.+||.++-.++..+|...      .++.+..|.  ..+|.++|
T Consensus         4 M~~i~ifepamCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~G~--~~LP~~~V   81 (106)
T 3ktb_A            4 MKKIEIFDPAMCCPTGLCGTNINPELMRIAVVIESLKKQGIIVTRHNLRDEPQVYVSNKTVNDFLQKHGA--DALPITLV   81 (106)
T ss_dssp             CCCEEEEECSCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCCCEEEETTTCTTHHHHSHHHHHHHHTTCG--GGCSEEEE
T ss_pred             CceEEEechhhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEccccChHHHhcCHHHHHHHHHcCc--ccCCEEEE
Confidence            567888876665100001   1     1235567888899999999999987532      122222344  78999999


Q ss_pred             CCEEE--ech
Q 048504          194 RGKHV--GNA  201 (277)
Q Consensus       194 ~G~~I--GG~  201 (277)
                      ||+.+  |-|
T Consensus        82 DGevv~~G~y   91 (106)
T 3ktb_A           82 DGEIAVSQTY   91 (106)
T ss_dssp             TTEEEECSSC
T ss_pred             CCEEEEeccC
Confidence            99976  555

>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}

Probab=85.55  E-value=5.5  Score=30.59  Aligned_cols=63  Identities=11%  Similarity=0.191  Sum_probs=36.3

Q ss_pred             EEEEEecCCCCCCCChh--HHHHHHHH----Hh----CCCeEEEEECCCCHH-HHH--------------------HHHH
Q 048504          131 IVVYLTSLRGIRRTFED--CYAVRMIF----RG----FRVWVDERDVSMDSA-YKK--------------------ELQC  179 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~--C~~Vk~iL----~~----~gV~y~ErDVs~d~~-~re--------------------ELke  179 (277)
                      |+.|..+||      +.  |......|    +.    .++.+.-++++.+++ +++                    ++.+
T Consensus        37 ll~F~a~~C------~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  110 (150)
T 3fw2_A           37 LINFWASWN------DSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAK  110 (150)
T ss_dssp             EEEEECTTC------CCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHH
T ss_pred             EEEEEeCCC------CchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHH
Confidence            444555654      68  98544433    22    367888888887643 222                    3334


Q ss_pred             HhCCCCCCCcEEE-e--CCEEEech
Q 048504          180 VFGGKNVTLPQVF-I--RGKHVGNA  201 (277)
Q Consensus       180 ~lG~~~~tvPqVF-I--~G~~IGG~  201 (277)
                      .+|-  ..+|.+| |  +|+.+.-.
T Consensus       111 ~~~v--~~~P~~~lid~~G~i~~~~  133 (150)
T 3fw2_A          111 QYSI--YKIPANILLSSDGKILAKN  133 (150)
T ss_dssp             HTTC--CSSSEEEEECTTSBEEEES
T ss_pred             HcCC--CccCeEEEECCCCEEEEcc
Confidence            4443  5788876 4  57766544

>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A

Probab=85.46  E-value=3.1  Score=31.91  Aligned_cols=54  Identities=11%  Similarity=0.022  Sum_probs=34.4

Q ss_pred             ChhHHHHHHHHHh--------CCCeEEEEECCCCHH--------------------HHHHHHHHhCCCCCCCcEEE-e--
Q 048504          145 FEDCYAVRMIFRG--------FRVWVDERDVSMDSA--------------------YKKELQCVFGGKNVTLPQVF-I--  193 (277)
Q Consensus       145 c~~C~~Vk~iL~~--------~gV~y~ErDVs~d~~--------------------~reELke~lG~~~~tvPqVF-I--  193 (277)
                      |+.|......|..        .++.+..++++.+.+                    ...++.+.+|-  ..+|.++ |  
T Consensus        40 C~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v--~~~Pt~~lid~  117 (146)
T 1o8x_A           40 CPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV--ESIPTLIGVDA  117 (146)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC--CSSSEEEEEET
T ss_pred             CHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC--CCCCEEEEEEC
Confidence            5899876655543        367788888876542                    23456666654  6789875 4  


Q ss_pred             -CCEEEec
Q 048504          194 -RGKHVGN  200 (277)
Q Consensus       194 -~G~~IGG  200 (277)
                       +|+.+.-
T Consensus       118 ~~G~i~~~  125 (146)
T 1o8x_A          118 DSGDVVTT  125 (146)
T ss_dssp             TTCCEEES
T ss_pred             CCCeEEEe
Confidence             4776643

>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}

Probab=85.30  E-value=7.3  Score=29.63  Aligned_cols=27  Identities=4%  Similarity=-0.198  Sum_probs=18.5

Q ss_pred             CChhHHHHHHHHHh-------CCCeEEEEECCCC
Q 048504          144 TFEDCYAVRMIFRG-------FRVWVDERDVSMD  170 (277)
Q Consensus       144 Tc~~C~~Vk~iL~~-------~gV~y~ErDVs~d  170 (277)
                      .|+.|......|..       .++.+..++++.+
T Consensus        39 ~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~   72 (154)
T 3kcm_A           39 WCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEG   72 (154)
T ss_dssp             TCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTT
T ss_pred             CCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCc
Confidence            36899876555543       2577788888775

>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A

Probab=85.23  E-value=0.52  Score=38.75  Aligned_cols=57  Identities=7%  Similarity=0.015  Sum_probs=32.9

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE-e--CCEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF-I--RGKHV  198 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF-I--~G~~I  198 (277)
                      +|.|+++||      ++|+.+...+...       ++.|..+||+.+..   ++....+  ...+|.++ +  +|+.|
T Consensus        48 lV~F~A~WC------~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~---~~~~~~~--v~~~PT~~f~~~~G~~v  114 (151)
T 3ph9_A           48 MVIHHLEDC------QYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETT---DKNLSPD--GQYVPRIMFVDPSLTVR  114 (151)
T ss_dssp             EEEECCTTC------HHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCS---CGGGCTT--CCCSSEEEEECTTSCBC
T ss_pred             EEEEECCCC------HhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCch---hhHhhcC--CCCCCEEEEECCCCCEE
Confidence            444566665      7999988777642       23577778764321   1111222  36799985 4  46543

>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}

Probab=85.17  E-value=1.9  Score=36.61  Aligned_cols=52  Identities=15%  Similarity=0.248  Sum_probs=35.9

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF  192 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF  192 (277)
                      ||.|+++||      +.|++..-.|+.    +     +|.+..+|++.+.  ..++.+..+-  ..+|.++
T Consensus        34 lv~F~a~wC------~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~--~~~l~~~~~v--~~~Pt~~   94 (244)
T 3q6o_A           34 AVEFFASWC------GHCIAFAPTWXALAEDVKAWRPALYLAALDCAEET--NSAVCRDFNI--PGFPTVR   94 (244)
T ss_dssp             EEEEECTTC------HHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTT--THHHHHHTTC--CSSSEEE
T ss_pred             EEEEECCcC------HHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchh--hHHHHHHcCC--CccCEEE
Confidence            566777775      799988777754    2     5778889985432  2456666664  7899984

>1b8x_A Protein (AML-1B); nuclear matrix targeting signal protein, signal protein; 2.70A {Escherichia coli} SCOP: a.45.1.1 c.47.1.5

Probab=85.17  E-value=0.35  Score=43.04  Aligned_cols=70  Identities=10%  Similarity=0.058  Sum_probs=46.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HH-HHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SA-YKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~-~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      ++||.-..+      ++|.+|+.+|+.+||+|+.+.|+..  .+ +..+.  .++.....||.|..||..|.....+.+.
T Consensus         2 ~~Lyy~~~s------~~~~~vr~~L~e~gi~ye~~~v~~~~~~~~~~~~~--~ln~P~gkVPvL~d~g~~l~ES~aI~~Y   73 (280)
T 1b8x_A            2 PILGYWKIK------GLVQPTRLLLEYLEEKYEEHLYERDEGDKWRNKKF--ELGLEFPNLPYYIDGDVKLTQSMAIIRY   73 (280)
T ss_dssp             CCCEEESSS------TTTHHHHHHHHHTTCCCCCEEECSSTTTTTTSSTT--TTCCSSCCSSBEECSSCEECSHHHHHHH
T ss_pred             cEEEEeCCC------chHHHHHHHHHHcCCCcEEEEeCCCChhhhhhhhh--ccCCCCCCCCEEEECCEEEEcHHHHHHH
Confidence            356666544      6999999999999999987777642  11 11111  1121125799998888888887777664


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        74 L   74 (280)
T 1b8x_A           74 I   74 (280)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=84.77  E-value=0.59  Score=32.77  Aligned_cols=26  Identities=27%  Similarity=0.733  Sum_probs=13.8

Q ss_pred             EeCCCCCCcceeeeCCCCcceeCCCCCcCcee
Q 048504          238 VPCGNCSGSRKVFDEADGVPKRCLECNENGLI  269 (277)
Q Consensus       238 VpC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLv  269 (277)
                      ++|+.|+|+-++.      ...|+.|+-.|.+
T Consensus        10 ~~C~~C~GsG~~~------~~~C~~C~G~G~v   35 (53)
T 2bx9_A           10 VACPKCERAGEIE------GTPCPACSGKGVI   35 (53)
T ss_dssp             EECTTTTTSSEET------TEECTTTTTSSEE
T ss_pred             ccCCCCcceeccC------CCCCccCCCCccE
Confidence            4555555555442      1456666655554

>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C

Probab=84.67  E-value=0.48  Score=42.15  Aligned_cols=79  Identities=16%  Similarity=0.191  Sum_probs=47.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEechhH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVGNADV  203 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IGG~de  203 (277)
                      ||.|+.+||      +.|+.+...|..+     +|.|..+|++.     .++.+.++  ...+|.++|  +|+.|+-+.-
T Consensus       137 vV~Fya~wC------~~Ck~l~p~l~~La~~~~~v~f~kVd~d~-----~~l~~~~~--I~~~PTll~~~~G~~v~~~vG  203 (245)
T 1a0r_P          137 VVHIYEDGI------KGCDALNSSLICLAAEYPMVKFCKIKASN-----TGAGDRFS--SDVLPTLLVYKGGELLSNFIS  203 (245)
T ss_dssp             EEEEECTTS------TTHHHHHHHHHHHHHHCTTSEEEEEEHHH-----HCCTTSSC--TTTCSEEEEEETTEEEEEETT
T ss_pred             EEEEECCCC------hHHHHHHHHHHHHHHHCCCCEEEEEeCCc-----HHHHHHCC--CCCCCEEEEEECCEEEEEEeC
Confidence            455666665      7999988888753     58888888753     22333333  367898754  8876543322


Q ss_pred             HHHH----HhhccHHHHhcCCCC
Q 048504          204 LKSM----YETGELARVLDGFPR  222 (277)
Q Consensus       204 l~~L----~EsGeL~klL~~~~~  222 (277)
                      +..+    .....|.++|...+.
T Consensus       204 ~~~~~g~~~~~e~Le~~L~~~g~  226 (245)
T 1a0r_P          204 VTEQLAEEFFTGDVESFLNEYGL  226 (245)
T ss_dssp             GGGGSCTTCCHHHHHHHHHTTTC
T ss_pred             CcccccccccHHHHHHHHHHcCC
Confidence            2211    012358888877554

>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A

Probab=84.63  E-value=1.6  Score=36.20  Aligned_cols=57  Identities=14%  Similarity=0.244  Sum_probs=38.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-------C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-------F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-------~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~IG  199 (277)
                      ||.|+++||      +.|+.....|..       .  .|.+..+|++.+++    |.+.+|-  ..+|.+++  +|+.+.
T Consensus       151 ~v~f~a~wC------~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~----l~~~~~v--~~~Pt~~~~~~g~~~~  218 (241)
T 3idv_A          151 LVEFYAPWC------GHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETD----LAKRFDV--SGYPTLKIFRKGRPYD  218 (241)
T ss_dssp             EEEEECTTC------TGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEECCCC------HHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHH----HHHHcCC--cccCEEEEEECCeEEE
Confidence            555677775      689765444432       1  28899999998754    5566664  68998854  787664

>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}

Probab=84.55  E-value=1.7  Score=35.73  Aligned_cols=61  Identities=16%  Similarity=0.354  Sum_probs=43.7

Q ss_pred             cEEEEEec-CCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEEec
Q 048504          130 RIVVYLTS-LRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHVGN  200 (277)
Q Consensus       130 kVVLYttS-lcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~IGG  200 (277)
                      .|+|++.. +|    -|..|+.+--+|+.    +  +|.+..+|++.+    .+|...+|-  ..+|.+  |-||+.|+-
T Consensus        35 ~vlVdF~A~wC----r~gpCk~iaPvleela~e~~~~v~~~KVdvDe~----~~la~~ygV--~siPTlilFkdG~~v~~  104 (137)
T 2qsi_A           35 IVVLFFRGDAV----RFPEAADLAVVLPELINAFPGRLVAAEVAAEAE----RGLMARFGV--AVCPSLAVVQPERTLGV  104 (137)
T ss_dssp             EEEEEECCCTT----TCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGH----HHHHHHHTC--CSSSEEEEEECCEEEEE
T ss_pred             cEEEEEeCCcc----CCCchhhHHhHHHHHHHHccCCcEEEEEECCCC----HHHHHHcCC--ccCCEEEEEECCEEEEE
Confidence            57776665 76    13699988888775    3  467888888755    456777875  789987  679988753

>2fno_A AGR_PAT_752P; thioredoxin fold, GST C-terminal domain-like fold, structura genomics, joint center for structural genomics, JCSG; 2.00A {Agrobacterium tumefaciens} SCOP: a.45.1.1 c.47.1.5

Probab=83.79  E-value=1.3  Score=38.27  Aligned_cols=71  Identities=14%  Similarity=0.017  Sum_probs=47.4

Q ss_pred             CCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHH--h--CCCCCCCcEE--EeCCEEEec
Q 048504          127 TEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCV--F--GGKNVTLPQV--FIRGKHVGN  200 (277)
Q Consensus       127 ~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~--l--G~~~~tvPqV--FI~G~~IGG  200 (277)
                      ....+.||+...+      ..|.+|+.+|+..||+|+.++++.    .+.+.+.  .  ......||.+  ..||..|..
T Consensus        16 ~~~~~~Ly~~~~~------~~~~~vrl~L~e~gi~ye~~~~~~----~~~~~~~~~~~~~nP~gkVPvL~~~d~g~~l~E   85 (248)
T 2fno_A           16 GMNTFDLYYWPVP------FRGQLIRGILAHCGCSWDEHDVDA----IEGLMDCGAEKQPVAFMGPPVLIDRERNFAISQ   85 (248)
T ss_dssp             SCBSEEEECCSSS------STTHHHHHHHHHTTCCEECCCHHH----HHHHHHSCGGGSSSCCSSSCEEEETTTTEEEES
T ss_pred             CCCceEEEecCCC------CchHHHHHHHHHcCCCcEeeccch----HHHHHhccccccCCCCCCCCEEEeccCCEEEec
Confidence            3456889987644      478999999999999999876541    1222110  0  1123679999  567777877


Q ss_pred             hhHHHHH
Q 048504          201 ADVLKSM  207 (277)
Q Consensus       201 ~del~~L  207 (277)
                      ...+.+.
T Consensus        86 S~AI~~Y   92 (248)
T 2fno_A           86 MPAIAIY   92 (248)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7666664

>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}

Probab=83.63  E-value=5  Score=32.01  Aligned_cols=63  Identities=10%  Similarity=0.076  Sum_probs=39.0

Q ss_pred             cEEE-EEecCCCCCCCChhHHHHHHHHHh--------CCCeEEEEECCCCHHHH--------------------HHHHHH
Q 048504          130 RIVV-YLTSLRGIRRTFEDCYAVRMIFRG--------FRVWVDERDVSMDSAYK--------------------KELQCV  180 (277)
Q Consensus       130 kVVL-YttSlcgiR~Tc~~C~~Vk~iL~~--------~gV~y~ErDVs~d~~~r--------------------eELke~  180 (277)
                      .|+| |..++      |+.|.+....|..        .++.+..++++.+.+..                    .++.+.
T Consensus        50 ~vll~F~a~w------C~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  123 (165)
T 3s9f_A           50 TVFFYFSASW------CPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKK  123 (165)
T ss_dssp             EEEEEEECTT------CHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHH
T ss_pred             EEEEEEECCc------ChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHH
Confidence            3444 55555      5899876655543        36778888887664311                    455555


Q ss_pred             hCCCCCCCcEEEe-C---CEEEec
Q 048504          181 FGGKNVTLPQVFI-R---GKHVGN  200 (277)
Q Consensus       181 lG~~~~tvPqVFI-~---G~~IGG  200 (277)
                      +|.  ..+|.+|| |   |+.|.-
T Consensus       124 ~~v--~~~Pt~~lid~~~G~iv~~  145 (165)
T 3s9f_A          124 YSV--ESIPTLIGLNADTGDTVTT  145 (165)
T ss_dssp             TTC--CSSSEEEEEETTTCCEEES
T ss_pred             cCC--CCCCEEEEEeCCCCEEEec
Confidence            654  67898865 3   777653

>1bg5_A MAB, fusion protein of alpha-Na,K-ATPase with glutathione S-transferase; ankyrin binding, carrier crystallization, ION transport; 2.60A {Rattus norvegicus} SCOP: a.45.1.1 c.47.1.5

Probab=83.60  E-value=0.26  Score=42.48  Aligned_cols=71  Identities=10%  Similarity=-0.038  Sum_probs=46.2

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHH--hCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCV--FGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~--lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      ++||+...      +++|.+|+.+|+..||+|+.+.|+.. ...+.+...  ++....+||.+..||..|.....+.+..
T Consensus         3 ~~Ly~~~~------s~~~~~vr~~L~~~gi~ye~~~v~~~-~~~~~~~~~~~~~~P~g~VPvL~d~~~~l~eS~aI~~yL   75 (254)
T 1bg5_A            3 PILGYWKI------KGLVQPTRLLLEYLEEKYEEHLYERD-EGDKWRNKKFELGLEFPNLPYYIDGDVKLTQSMAIIRYI   75 (254)
T ss_dssp             CBCCSCSC------STTTHHHHHHHHHTTCCCBCCCCCGG-GTHHHHHHTTTTCCSSCCSSBCCCSSCCCBSHHHHHHHH
T ss_pred             cEEEEeCC------cchhHHHHHHHHHcCCCceEEeeCCC-CHHHHhhcccccCCCCCCCCEEEECCEEEecHHHHHHHH
Confidence            45666554      46999999999999999998877642 011122222  1212357999987777777776666643

>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}

Probab=83.37  E-value=6  Score=32.08  Aligned_cols=35  Identities=14%  Similarity=0.095  Sum_probs=24.8

Q ss_pred             CCCcEEEEEecCCCCCCCChhHHHHHHHHHhCC-CeEEEEEC
Q 048504          127 TEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFR-VWVDERDV  167 (277)
Q Consensus       127 ~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~g-V~y~ErDV  167 (277)
                      +...|++|+-..      ||+|+++...|+.++ |.+..+++
T Consensus        14 a~~~vv~f~D~~------Cp~C~~~~~~l~~l~~v~v~~~~~   49 (147)
T 3gv1_A           14 GKLKVAVFSDPD------CPFCKRLEHEFEKMTDVTVYSFMM   49 (147)
T ss_dssp             CCEEEEEEECTT------CHHHHHHHHHHTTCCSEEEEEEEC
T ss_pred             CCEEEEEEECCC------ChhHHHHHHHHhhcCceEEEEEEc
Confidence            344566777654      699999999998864 55666655

>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}

Probab=83.11  E-value=3.4  Score=32.82  Aligned_cols=35  Identities=6%  Similarity=-0.096  Sum_probs=21.8

Q ss_pred             EEEEEecCCCCCCCChhHHHH-------HHHHHh--CCCeEEEEECCCCH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAV-------RMIFRG--FRVWVDERDVSMDS  171 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~V-------k~iL~~--~gV~y~ErDVs~d~  171 (277)
                      ||.|..+||      +.|++.       ..+-+.  .++.+..+|++.+.
T Consensus        51 lv~F~A~WC------~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~   94 (172)
T 3f9u_A           51 MLDFTGYGC------VNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKT   94 (172)
T ss_dssp             EEEEECTTC------HHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCC
T ss_pred             EEEEECCCC------HHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCccc
Confidence            444667775      799986       222222  15888888887654

>3m1g_A Putative glutathione S-transferase; ECM4-like subfamily, GST_C family, structural genomics, PSI- protein structure initiative; 2.10A {Corynebacterium glutamicum}

Probab=82.40  E-value=1.1  Score=42.13  Aligned_cols=38  Identities=11%  Similarity=-0.061  Sum_probs=30.9

Q ss_pred             CCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCe-EEEEECC
Q 048504          125 PGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVW-VDERDVS  168 (277)
Q Consensus       125 ~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~-y~ErDVs  168 (277)
                      |...+++.||....      ||+|++|+-+|.-+||+ +..+|+.
T Consensus        56 ~~e~gr~~LY~~~~------cP~a~Rv~I~L~lkGL~e~i~vdl~   94 (362)
T 3m1g_A           56 PVEAGRYRLVAARA------CPWAHRTVITRRLLGLENVISLGLT   94 (362)
T ss_dssp             ECCTTSEEEEECTT------CHHHHHHHHHHHHHTCTTTSEEEEC
T ss_pred             CCCCCeEEEEecCC------CccHHHHHHHHHHhCCCceEEEecc
Confidence            45678999999975      58999999999999997 4456664

>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}

Probab=81.41  E-value=4.7  Score=30.84  Aligned_cols=24  Identities=13%  Similarity=-0.263  Sum_probs=17.7

Q ss_pred             CChhHHHHHHHHHh----CCCeEEEEEC
Q 048504          144 TFEDCYAVRMIFRG----FRVWVDERDV  167 (277)
Q Consensus       144 Tc~~C~~Vk~iL~~----~gV~y~ErDV  167 (277)
                      .|+.|......|..    +++.+..+++
T Consensus        41 ~C~~C~~~~~~l~~l~~~~~v~~v~v~~   68 (154)
T 3ia1_A           41 WCTVCKAEFPGLHRVAEETGVPFYVISR   68 (154)
T ss_dssp             TCHHHHHHHHHHHHHHHHHCCCEEEEEC
T ss_pred             cChhHHHHHHHHHHHHHHcCCeEEEEeC
Confidence            36899876665554    3888888888

>4gci_A Glutathione S-transferase; GST, enzyme function initiative, structural genomics; HET: GSH; 1.50A {Yersinia pestis} PDB: 4g9h_A*

Probab=81.10  E-value=0.95  Score=37.51  Aligned_cols=67  Identities=4%  Similarity=0.080  Sum_probs=42.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCC--CHH-HHHHHHHHhCCCCCCCcEEEeCC-EEEechhHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSM--DSA-YKKELQCVFGGKNVTLPQVFIRG-KHVGNADVLKS  206 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~--d~~-~reELke~lG~~~~tvPqVFI~G-~~IGG~del~~  206 (277)
                      +.||..+.       ....+|+-+|+.+||+|+.+.|+.  .++ ...++.++...  .++|.+.++| ..|.....+.+
T Consensus         4 mkLY~~p~-------s~s~rvri~L~e~gl~~e~~~vd~~~~~~~~~~~~~~~nP~--g~vP~L~~d~~~~l~eS~aI~~   74 (211)
T 4gci_A            4 MKLFYKPG-------ACSLSPHIVLREAGLDFSIERVDLVTKKTETGADYLSINPK--GQVPALVLDDGSLLTEGVAIVQ   74 (211)
T ss_dssp             EEEEECTT-------STTHHHHHHHHHTTCCEEEEEEETTTTEETTSCBGGGTCTT--CCSCEEECTTSCEEECHHHHHH
T ss_pred             EEEEeCCC-------CcHHHHHHHHHHhCCCCeEEEecCCCCcccCCHHHHHhCCC--CCCCccccCCCCEEecCHHHHH
Confidence            56888753       235789999999999998665542  221 11234444432  5799998877 55666555554

>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A

Probab=80.89  E-value=1.3  Score=36.61  Aligned_cols=63  Identities=21%  Similarity=0.252  Sum_probs=43.3

Q ss_pred             CCcEEEEEec-CCCCCCCChhHHHHHHHHHh----C--C-CeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEE
Q 048504          128 EDRIVVYLTS-LRGIRRTFEDCYAVRMIFRG----F--R-VWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKH  197 (277)
Q Consensus       128 ~~kVVLYttS-lcgiR~Tc~~C~~Vk~iL~~----~--g-V~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~  197 (277)
                      ...|+|++.. +|    -|+.|+.+--+|+.    +  . |.|..+|++.+    .+|...+|-  ..+|.+  |-||+.
T Consensus        34 ~~~vlVdF~a~~c----rCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~----~~lA~~ygV--~sIPTlilFk~G~~  103 (140)
T 2qgv_A           34 APDGVVLLSSDPK----RTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQS----EAIGDRFGA--FRFPATLVFTGGNY  103 (140)
T ss_dssp             CSSEEEEECCCTT----TCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHH----HHHHHHHTC--CSSSEEEEEETTEE
T ss_pred             CCCEEEEEeCCcc----cCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCC----HHHHHHcCC--ccCCEEEEEECCEE
Confidence            4457776653 43    26788888877775    3  3 67777777644    467777875  789987  679988


Q ss_pred             Eec
Q 048504          198 VGN  200 (277)
Q Consensus       198 IGG  200 (277)
                      |+-
T Consensus       104 v~~  106 (140)
T 2qgv_A          104 RGV  106 (140)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            753

>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A

Probab=80.10  E-value=0.75  Score=38.23  Aligned_cols=55  Identities=11%  Similarity=-0.013  Sum_probs=34.1

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhC-CCCCCCcEE-EeC
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFG-GKNVTLPQV-FIR  194 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG-~~~~tvPqV-FI~  194 (277)
                      -||.|..+||      ++|+...-+|+.+     +|.+..+|++.++    ++.+..+ .+...+|.+ |++
T Consensus        57 vvv~F~A~WC------~pC~~~~P~l~~l~~~~~~v~~~~v~~d~~~----~~~~~~~~~~v~~iPt~i~~~  118 (167)
T 1z6n_A           57 RLLVAGEMWC------PDCQINLAALDFAQRLQPNIELAIISKGRAE----DDLRQRLALERIAIPLVLVLD  118 (167)
T ss_dssp             EEEEECCTTC------HHHHHHHHHHHHHHHHCTTEEEEEECHHHHH----HHTTTTTTCSSCCSSEEEEEC
T ss_pred             EEEEEECCCC------hhHHHHHHHHHHHHHHCCCcEEEEEECCCCH----HHHHHHHHcCCCCcCeEEEEC
Confidence            3677788886      7999888777653     4667777765432    2222222 123789986 444

>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24

Probab=80.08  E-value=11  Score=30.81  Aligned_cols=81  Identities=10%  Similarity=0.123  Sum_probs=47.1

Q ss_pred             CcEEEEEecCCCCCCCChhHHHH----------HHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE-EeC---
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAV----------RMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV-FIR---  194 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~V----------k~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV-FI~---  194 (277)
                      ..|+||....     .|.+|+.+          +++|+. ++-+..+|++. + .-.+|.+.++.  ..+|.+ ||+   
T Consensus        43 K~vlvd~~a~-----wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~~-~-~~~~l~~~y~v--~~~P~~~fld~~~  112 (153)
T 2dlx_A           43 KWLMINIQNV-----QDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHDS-E-EGQRYIQFYKL--GDFPYVSILDPRT  112 (153)
T ss_dssp             CEEEEEEECS-----CTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESSS-H-HHHHHHHHHTC--CSSSEEEEECTTT
T ss_pred             CeEEEEEECC-----CCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecCC-H-hHHHHHHHcCC--CCCCEEEEEeCCC
Confidence            4577776652     46899765          455544 34445667743 3 33466777765  678888 564   


Q ss_pred             CE---EEechhHHHHHHhhccHHHHhcCCCC
Q 048504          195 GK---HVGNADVLKSMYETGELARVLDGFPR  222 (277)
Q Consensus       195 G~---~IGG~del~~L~EsGeL~klL~~~~~  222 (277)
                      |+   .+|| -+..++.+  .|+++++..+.
T Consensus       113 G~~l~~~~g-~~~~~fl~--~L~~~l~~~~~  140 (153)
T 2dlx_A          113 GQKLVEWHQ-LDVSSFLD--QVTGFLGEHGQ  140 (153)
T ss_dssp             CCCCEEESS-CCHHHHHH--HHHHHHHHTCS
T ss_pred             CcEeeecCC-CCHHHHHH--HHHHHHHhcCC
Confidence            42   3566 34444443  36777765544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	277
d1t1va_	93	c.47.1.14 (A:) SH3BGRL3 {Mouse (Mus musculus) [Tax	1e-23
d1wika_	109	c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (M	9e-11
d1fova_	82	c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)	1e-09
d1ktea_	105	c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)	5e-07
d1egoa_	85	c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)	3e-05
d1nm3a1	74	c.47.1.1 (A:166-239) C-terminal, Grx domain of Hyb	0.003

>d1t1va_ c.47.1.14 (A:) SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]} Length = 93

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: SH3BGR (SH3-binding, glutamic acid-rich protein-like)
domain: SH3BGRL3
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 89.6 bits (222), Expect = 1e-23
 Identities = 23/88 (26%), Positives = 37/88 (42%)

Query: 130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLP 189
            + VY TS+ G R        V  I  G R+     D+S D+A + E++ + G    T P
Sbjct: 3   GLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPKATPP 62

Query: 190 QVFIRGKHVGNADVLKSMYETGELARVL 217
           Q+     + G+ ++     E   L   L
Sbjct: 63  QIVNGNHYCGDYELFVEAVEQDTLQEFL 90

>d1wika_ c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 109

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin-like protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.8 bits (134), Expect = 9e-11
 Identities = 19/92 (20%), Positives = 41/92 (44%), Gaps = 3/92 (3%)

Query: 128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVT 187
           +  +++++   +   +       +  I     V  +  D+  D   ++ L+        T
Sbjct: 14  KASVMLFMKGNKQEAKC-GFSKQILEILNSTGVEYETFDILEDEEVRQGLKTFSNWP--T 70

Query: 188 LPQVFIRGKHVGNADVLKSMYETGELARVLDG 219
            PQ+++RG  VG  D++K + + GEL  +L G
Sbjct: 71  YPQLYVRGDLVGGLDIVKELKDNGELLPILKG 102

>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]} Length = 82

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Escherichia coli, Grx3 [TaxId: 562]

 Score = 51.9 bits (124), Expect = 1e-09
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 148 CYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM 207
           C+  + +     V   E  +  ++A ++E+    G    T+PQ+FI  +H+G  D L ++
Sbjct: 14  CHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGRT--TVPQIFIDAQHIGGYDDLYAL 71

Query: 208 YETGELARVL 217
              G L  +L
Sbjct: 72  DARGGLDPLL 81

>d1ktea_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Pig (Sus scrofa) [TaxId: 9823]} Length = 105

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 45.1 bits (106), Expect = 5e-07
 Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 12/95 (12%)

Query: 128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVW-----VDERDVSMDSAYKKELQCVFG 182
             ++VV+      I+ T   C   + +              +   + D+   ++      
Sbjct: 11  PGKVVVF------IKPTCPFCRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLT 64

Query: 183 GKNVTLPQVFIRGKHVGNADVLKSMYETGELARVL 217
           G     P+VFI  + +G    L+SM++ GEL   L
Sbjct: 65  GARTV-PRVFIGKECIGGCTDLESMHKRGELLTRL 98

>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli [TaxId: 562]} Length = 85

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Escherichia coli [TaxId: 562]

 Score = 39.6 bits (92), Expect = 3e-05
 Identities = 11/50 (22%), Positives = 22/50 (44%)

Query: 160 VWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYE 209
                 D+  +   K++LQ   G    T+PQ+F+  +H+G      +  +
Sbjct: 31  FQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFVDQQHIGGYTDFAAWVK 80

>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]} Length = 74

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: C-terminal, Grx domain of Hybrid-Prx5
species: Haemophilus influenzae [TaxId: 727]

 Score = 33.8 bits (77), Expect = 0.003
 Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 9/78 (11%)

Query: 128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVT 187
           ++ I ++             C   + +     +  +E  +  D+     ++ V G   V 
Sbjct: 4   QESISIFTKPGCP------FCAKAKQLLHDKGLSFEEIILGHDAT-IVSVRAVSGRTTV- 55

Query: 188 LPQVFIRGKHVGNADVLK 205
            PQVFI GKH+G +D L+
Sbjct: 56  -PQVFIGGKHIGGSDDLE 72

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	277
d1t1va_	93	SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]}	99.91
d1fova_	82	Glutaredoxin (Grx, thioltransferase) {Escherichia	99.88
d1wika_	109	Thioredoxin-like protein 2 {Mouse (Mus musculus) [	99.88
d1ktea_	105	Glutaredoxin (Grx, thioltransferase) {Pig (Sus scr	99.85
d1nm3a1	74	C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus	99.72
d1egoa_	85	Glutaredoxin (Grx, thioltransferase) {Escherichia	99.7
d1r7ha_	74	Glutaredoxin-like NRDH-redoxin {Corynebacterium am	99.65
d1h75a_	76	Glutaredoxin-like NRDH-redoxin {Escherichia coli [	99.64
d1abaa_	87	Glutaredoxin (Grx, thioltransferase) {Bacteriophag	99.59
d1wjka_	100	Thioredoxin-like structure containing protein C330	98.8
d1ttza_	75	Hypothetical protein XCC2852 {Xanthomonas campestr	98.53
d1hyua4	96	Alkyl hydroperoxide reductase subunit F (AhpF), N-	98.28
d1g7oa2	75	Glutaredoxin 2 {Escherichia coli [TaxId: 562]}	98.11
d1gwca2	83	Class tau GST {Aegilops tauschii, also known as Tr	97.94
d1oyja2	84	Class tau GST {Rice (Oryza sativa) [TaxId: 4530]}	97.85
d1k0ma2	86	Chloride intracellular channel 1 (clic1) {Human (H	97.85
d1eema2	98	Class omega GST {Human (Homo sapiens) [TaxId: 9606	97.83
d1e6ba2	80	Class zeta GST {Mouse-ear cress (Arabidopsis thali	97.79
d1v2aa2	83	Class delta GST {Mosquito (Anopheles dirus b), iso	97.78
d1z9ha2	113	Microsomal prostaglandin E synthase-2 {Crab-eating	97.53
d1k0da2	92	Yeast prion protein ure2p, nitrogen regulation fra	97.46
d1fw1a2	83	Class zeta GST {Human (Homo sapiens) [TaxId: 9606]	97.41
d1aw9a2	81	Class phi GST {Maize (Zea mays), type III [TaxId:	97.41
d1r5aa2	85	Class delta GST {Mosquito (Anopheles dirus b), iso	97.33
d1axda2	80	Class phi GST {Maize (Zea mays), type I [TaxId: 45	97.28
d1ljra2	79	Class theta GST {Human (Homo sapiens) [TaxId: 9606	97.27
d2a2ra2	77	Class pi GST {Human (Homo sapiens) [TaxId: 9606]}	96.96
d1gnwa2	84	Class phi GST {Mouse-ear cress (Arabidopsis thalia	96.94
d1jlva2	84	Class delta GST {Mosquito (Anopheles dirus b), iso	96.89
d1a8la2	107	Protein disulfide isomerase, PDI {Archaeon Pyrococ	96.78
d1z3ea1	114	Regulatory protein Spx {Bacillus subtilis [TaxId:	96.54
d1nhoa_	85	MTH807, thioredoxin/glutaredoxin-like protein {Arc	96.49
d1rw1a_	114	Hypothetical protein PA3664 (YffB) {Pseudomonas ae	96.33
d2cvda2	74	Class sigma GST {Human (Homo sapiens) [TaxId: 9606	96.24
d1fo5a_	85	MJ0307, thioredoxin/glutaredoxin-like protein {Arc	95.96
d1gula2	77	Class alpha GST {Human (Homo sapiens), (a1-1) [Tax	95.83
d1okta2	85	Pf GST {Malarial parasite (Plasmodium falciparum)	95.75
d1r26a_	113	Thioredoxin {Trypanosoma brucei [TaxId: 5691]}	95.54
d2gsqa2	75	Class sigma GST {Squid (Ommastrephes sloani pacifi	95.5
d1thxa_	108	Thioredoxin {Anabaena sp., pcc 7120 [TaxId: 1167]}	95.45
d1b48a2	78	Class alpha GST {Mouse (Mus musculus), (a1-4) [Tax	95.4
d1k3ya2	79	Class alpha GST {Human (Homo sapiens), (a1-1) [Tax	95.31
d1ep7a_	112	Thioredoxin {Chlamydomonas reinhardtii [TaxId: 305	95.13
d1syra_	103	Thioredoxin {Malarial parasite (Plasmodium falcipa	95.07
d1dbya_	107	Thioredoxin {Chlamydomonas reinhardtii [TaxId: 305	94.97
d1xfla_	114	Thioredoxin {Thale cress (Arabidopsis thaliana) [T	94.96
d1gh2a_	107	Thioredoxin-like protein, N-terminal domain {Human	94.5
d1j9ba_	138	Arsenate reductase ArsC {Escherichia coli [TaxId:	94.43
d1ti3a_	113	Thioredoxin {European aspen (Populus tremula), thi	94.13
d1fb6a_	104	Thioredoxin {Spinach (Spinacia oleracea), thioredo	94.13
d1m0ua2	76	Class sigma GST {Fruit fly (Drosophila melanogaste	93.76
d1eeja1	156	Disulfide bond isomerase, DsbC, C-terminal domain	93.67
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	93.39
d1tw9a2	77	Class sigma GST {Heligmosomoides polygyrus [TaxId:	93.38
d2ifqa1	105	Thioredoxin {Human (Homo sapiens) [TaxId: 9606]}	93.37
d1iloa_	77	MTH985, a thioredoxin {Archaeon Methanobacterium t	93.36
d1nw2a_	105	Thioredoxin {Alicyclobacillus acidocaldarius, form	93.34
d1qgva_	137	spliceosomal protein U5-15Kd {Human (Homo sapiens)	93.32
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	93.32
d1woua_	119	Putative 42-9-9 protein (thioredoxin containing pr	93.31
d1zmaa1	115	Bacterocin transport accessory protein Bta {Strept	93.27
d1tu7a2	77	Class pi GST {Onchocerca volvulus [TaxId: 6282]}	93.22
d1fhea2	80	Class alpha GST {Fasciola hepatica [TaxId: 6192]}	93.18
d2trxa_	108	Thioredoxin {Escherichia coli [TaxId: 562]}	92.4
d2c4ja2	84	Class mu GST {Human (Homo sapiens) [TaxId: 9606]}	92.29
d1f9ma_	112	Thioredoxin {Spinach (Spinacia oleracea), thioredo	91.77
d1duga2	80	Class alpha GST {Schistosoma japonicum [TaxId: 618	91.38
d1xg8a_	111	Hypothetical protein SA0798 {Staphylococcus aureus	91.35
d1pmta2	80	Class beta GST {Proteus mirabilis [TaxId: 584]}	90.65
d1n2aa2	80	Class beta GST {Escherichia coli [TaxId: 562]}	90.58
d1a8ya1	124	Calsequestrin {Rabbit (Oryctolagus cuniculus) [Tax	90.07
d1f2ea2	80	Class beta GST {Sphingomonas paucimobilis [TaxId:	90.02
d1t3ba1	150	Disulfide bond isomerase, DsbC, C-terminal domain	89.83
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	89.58
d2b5ea4	119	Protein disulfide isomerase, PDI {Baker's yeast (S	89.47
d2fnoa2	87	Hypothetical protein AGR_pAT_752p/Atu5508 {Agrobac	89.31
d1xwaa_	111	Thioredoxin {Fruit fly (Drosophila melanogaster) [	89.19
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	88.49
d1nhya2	75	GST-like domain of elongation factor 1-gamma {Bake	83.96
d2fwha1	117	Thiol:disulfide interchange protein DsbD, C-termin	83.73
d2dlxa1	147	UBX domain-containing protein 7 {Human (Homo sapie	81.62

>d1t1va_ c.47.1.14 (A:) SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: SH3BGR (SH3-binding, glutamic acid-rich protein-like)
domain: SH3BGRL3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=4.2e-25  Score=170.21  Aligned_cols=91  Identities=25%  Similarity=0.331  Sum_probs=87.1

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      .+|+||+|++|++|++..+|.+|+.||++++|+|+++||++|+..+++++++.|.+..++|||||||+||||+|++.+|+
T Consensus         2 ~~i~vy~ts~~~~~~~~~~~~r~~~lL~~~~I~y~~iDi~~d~~~~~~~~~~~g~~~~t~Pqifv~~~~iGg~del~~~~   81 (93)
T d1t1va_           2 SGLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVNGNHYCGDYELFVEAV   81 (93)
T ss_dssp             CCEEEEECSSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEETTEEEEEHHHHHHHH
T ss_pred             CCEEEEEccCcCChhhHHHHHHHHHHHHHCCCceEEEEecCchhHHHHHHHhccCCCceeEEEEECCEEEecHHHHHHHH
Confidence            56999999999999999999999999999999999999999999999999998865579999999999999999999999


Q ss_pred             hhccHHHHhcC
Q 048504          209 ETGELARVLDG  219 (277)
Q Consensus       209 EsGeL~klL~~  219 (277)
                      |+|+|.++|+.
T Consensus        82 e~g~L~~~lk~   92 (93)
T d1t1va_          82 EQDTLQEFLKL   92 (93)
T ss_dssp             HTTCHHHHTTC
T ss_pred             HCCCHHHHhcc
Confidence            99999999975

>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Escherichia coli, Grx3 [TaxId: 562]

Probab=99.88  E-value=6.2e-23  Score=153.53  Aligned_cols=81  Identities=23%  Similarity=0.385  Sum_probs=77.4

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHHh
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYE  209 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~E  209 (277)
                      .|+||++++      ||+|.+|+++|+.++|+|.++||+.|++.+++|.+..|.  .++|||||||++|||++++.+|++
T Consensus         2 ~I~iys~~~------Cp~C~~ak~~L~~~~i~y~~~di~~~~~~~~~~~~~~g~--~tvP~i~i~~~~IGG~~el~~l~~   73 (82)
T d1fova_           2 NVEIYTKET------CPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGR--TTVPQIFIDAQHIGGYDDLYALDA   73 (82)
T ss_dssp             CEEEEECSS------CHHHHHHHHHHHHHTCCCEEEECTTCSHHHHHHHHHHSS--CCSCEEEETTEEEESHHHHHHHHH
T ss_pred             cEEEEeCCC------CHhHHHHHHHHHHcCCCeEEEeccchHHHHHHHHHHhCC--CCCCeEEECCEEEecHHHHHHHHH
Confidence            599999986      589999999999999999999999999999999999986  899999999999999999999999


Q ss_pred             hccHHHHhc
Q 048504          210 TGELARVLD  218 (277)
Q Consensus       210 sGeL~klL~  218 (277)
                      +|+|+++|+
T Consensus        74 ~g~L~~lLk   82 (82)
T d1fova_          74 RGGLDPLLK   82 (82)
T ss_dssp             TTCSHHHHC
T ss_pred             cCCHHHHhC
Confidence            999999985

>d1wika_ c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin-like protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=6.2e-23  Score=163.12  Aligned_cols=101  Identities=20%  Similarity=0.329  Sum_probs=90.5

Q ss_pred             ccccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEe
Q 048504          120 SSIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVG  199 (277)
Q Consensus       120 ~~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IG  199 (277)
                      ++|+..+.+++||||++... -...||||.+|+++|+.++|+|.++||..+++.+++|.+.+|.  .|+|||||+|++||
T Consensus         6 ~~i~~~i~~~~VvvF~Kgt~-~~p~Cp~c~~ak~lL~~~~i~~~~~~v~~~~~~~~~l~~~t~~--~TvPqIFi~g~~IG   82 (109)
T d1wika_           6 SGLKVLTNKASVMLFMKGNK-QEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKTFSNW--PTYPQLYVRGDLVG   82 (109)
T ss_dssp             CCHHHHHTTSSEEEEESSTT-TCCCSSTHHHHHHHHHHTCSCEEEEESSSCHHHHHHHHHHHSC--CSSCEEECSSSEEE
T ss_pred             HHHHHHHhcCCEEEEeCCCC-CCCCChHHHHHHHHHHhcCCCceEEEecccHHHHHHHHHhcCC--CCCCeEEECCEEEc
Confidence            56777888999999998542 1235899999999999999999999999999999999999986  89999999999999


Q ss_pred             chhHHHHHHhhccHHHHhcCCCCC
Q 048504          200 NADVLKSMYETGELARVLDGFPRR  223 (277)
Q Consensus       200 G~del~~L~EsGeL~klL~~~~~~  223 (277)
                      |+|+|++|+++|+|.++|+.....
T Consensus        83 G~ddl~~l~~~G~L~~lL~~~~~~  106 (109)
T d1wika_          83 GLDIVKELKDNGELLPILKGESGP  106 (109)
T ss_dssp             CHHHHHHHHHHTCSHHHHHTCCSC
T ss_pred             CHHHHHHHHHCCCHHHHHHhcCCC
Confidence            999999999999999999876543

>d1ktea_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.85  E-value=7.4e-22  Score=154.89  Aligned_cols=94  Identities=21%  Similarity=0.297  Sum_probs=79.7

Q ss_pred             cccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCe-----EEEEECCCCHH-HHHHHHHHhCCCCCCCcEEEeC
Q 048504          121 SIRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVW-----VDERDVSMDSA-YKKELQCVFGGKNVTLPQVFIR  194 (277)
Q Consensus       121 ~i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~-----y~ErDVs~d~~-~reELke~lG~~~~tvPqVFI~  194 (277)
                      .|...+.+++||||++++|      |+|.+|+++|+.++++     |+++|+..|.. .++.|.+.+|.  .|+||||||
T Consensus         4 ~v~~~i~~~~Vviysk~~C------p~C~~ak~ll~~~~~~~~~~~~~e~d~~~d~~~~~~~l~~~~g~--~tvPqIfi~   75 (105)
T d1ktea_           4 FVNSKIQPGKVVVFIKPTC------PFCRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGA--RTVPRVFIG   75 (105)
T ss_dssp             HHHHHCCTTCEEEEECSSC------HHHHHHHHHHHHSCBCTTSEEEEEGGGSTTHHHHHHHHHHHHSC--CCSCEEEET
T ss_pred             HHHHHhccCCEEEEECCCC------chHHHHHHHHHHhCCccceeeeeecccccccHHHHHHHhhccCC--CcCcEEEEC
Confidence            3445567899999999875      8999999999999976     67788887765 44556777776  899999999


Q ss_pred             CEEEechhHHHHHHhhccHHHHhcCCCC
Q 048504          195 GKHVGNADVLKSMYETGELARVLDGFPR  222 (277)
Q Consensus       195 G~~IGG~del~~L~EsGeL~klL~~~~~  222 (277)
                      |+||||+++|++|+++|+|.++|+.++.
T Consensus        76 g~~IGG~~el~~l~~~G~L~~~L~~~Ga  103 (105)
T d1ktea_          76 KECIGGCTDLESMHKRGELLTRLQQVGA  103 (105)
T ss_dssp             TEEEESHHHHHHHHHHTHHHHHHHHHTC
T ss_pred             CEEEecHHHHHHHHHCCCHHHHHHHcCC
Confidence            9999999999999999999999987554

>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: C-terminal, Grx domain of Hybrid-Prx5
species: Haemophilus influenzae [TaxId: 727]

Probab=99.72  E-value=8.6e-18  Score=123.12  Aligned_cols=70  Identities=26%  Similarity=0.433  Sum_probs=62.2

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      +.+|+||++++      ||+|.+|+++|+.+||+|+++||+.|.. ++++.+..|.  .++|||||||++|||++||.+
T Consensus         4 ~~~I~iYs~~~------C~~C~~ak~lL~~~~i~~~~~~v~~~~~-~~~~~~~~~~--~tvP~i~i~g~~IGG~~el~~   73 (74)
T d1nm3a1           4 QESISIFTKPG------CPFCAKAKQLLHDKGLSFEEIILGHDAT-IVSVRAVSGR--TTVPQVFIGGKHIGGSDDLEK   73 (74)
T ss_dssp             CCCEEEEECSS------CHHHHHHHHHHHHHTCCCEEEETTTTCC-HHHHHHHTCC--SSSCEEEETTEEEESHHHHHH
T ss_pred             cCcEEEEECCC------CHHHHHHHHHHHHcCCCeEEEEccCcHH-HHHHHHHhCC--ccCCEEEECCEEEEChHHHhh
Confidence            56799999986      5899999999999999999999998865 4677777776  899999999999999999875

>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=2.2e-18  Score=129.63  Aligned_cols=75  Identities=19%  Similarity=0.275  Sum_probs=66.7

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCC-----CeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFR-----VWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVL  204 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~g-----V~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del  204 (277)
                      +||||++++      ||+|.+||++|+.++     |+|+++|+..++..+++|.+..+....|+|||||||++|||+++|
T Consensus         2 kvviysk~~------Cp~C~~aK~ll~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~tvPqIfi~g~~IGG~~el   75 (85)
T d1egoa_           2 QTVIFGRSG------CPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFVDQQHIGGYTDF   75 (85)
T ss_dssp             EEEEECCTT------STHHHHHHHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEEETTEEEESSHHH
T ss_pred             EEEEEeCCC------CHhHHHHHHHHHHcCCCCCCceEEEEecCCCHHHHHHHHHHhcCCCCCCCEEEECCEEEECHHHH
Confidence            699999986      589999999999854     789999998888888999999876557999999999999999999


Q ss_pred             HHHHhh
Q 048504          205 KSMYET  210 (277)
Q Consensus       205 ~~L~Es  210 (277)
                      .++++.
T Consensus        76 ~~~~~~   81 (85)
T d1egoa_          76 AAWVKE   81 (85)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            998764

>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin-like NRDH-redoxin
species: Corynebacterium ammoniagenes [TaxId: 1697]

Probab=99.65  E-value=2.5e-16  Score=114.85  Aligned_cols=64  Identities=20%  Similarity=0.308  Sum_probs=57.8

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechh
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNAD  202 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~d  202 (277)
                      +|+||++++      |++|.+|+++|+.+||+|+++||+.|++.+++++. +|.  .++|+|||||++|||++
T Consensus         2 ~v~iYt~~~------C~~C~~ak~~L~~~~i~~~~~~i~~~~~~~~~~~~-~g~--~tvP~i~i~g~~igGf~   65 (74)
T d1r7ha_           2 SITLYTKPA------CVQCTATKKALDRAGLAYNTVDISLDDEARDYVMA-LGY--VQAPVVEVDGEHWSGFR   65 (74)
T ss_dssp             CEEEEECTT------CHHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHH-TTC--BCCCEEEETTEEEESCC
T ss_pred             EEEEEeCCC------ChhHHHHHHHHHHcCCceEEEEccCCHHHHHHHHH-hCC--CCcCEEEECCEEEeCCC
Confidence            599999986      58999999999999999999999999998888765 465  79999999999999984

>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin-like NRDH-redoxin
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=2.7e-16  Score=115.75  Aligned_cols=70  Identities=17%  Similarity=0.176  Sum_probs=61.3

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEech--hHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNA--DVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~--del~~L  207 (277)
                      +|+||++++      |++|.+|+++|+.+||+|+++||+.|++.+++++. +|.  .++|+|||||++|||+  |.|.+|
T Consensus         2 ki~iYs~~~------C~~C~~ak~~L~~~~i~y~~~~i~~~~~~~~~~~~-~g~--~tvP~i~i~~~~i~Gf~~d~i~~L   72 (76)
T d1h75a_           2 RITIYTRND------CVQCHATKRAMENRGFDFEMINVDRVPEAAEALRA-QGF--RQLPVVIAGDLSWSGFRPDMINRL   72 (76)
T ss_dssp             CEEEEECTT------CHHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHH-TTC--CSSCEEEETTEEEESCCHHHHGGG
T ss_pred             EEEEEeCCC------CccHHHHHHHHHhcCceeEEEeecCCHHHHHHHHh-cCC--CCCCEEEECCEEEECCCHHHHHHH
Confidence            599999986      58999999999999999999999999998888765 565  7999999999999997  556555


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      +
T Consensus        73 ~   73 (76)
T d1h75a_          73 H   73 (76)
T ss_dssp             S
T ss_pred             h
Confidence            4

>d1abaa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.59  E-value=2.7e-15  Score=113.61  Aligned_cols=77  Identities=21%  Similarity=0.314  Sum_probs=61.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC-----HHHHHHHHHHhCC---CCCCCcEEEe-CCEEEech
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD-----SAYKKELQCVFGG---KNVTLPQVFI-RGKHVGNA  201 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d-----~~~reELke~lG~---~~~tvPqVFI-~G~~IGG~  201 (277)
                      +.||+.+..  ...|++|.+|+++|+.+||+|+++|+..+     ...++++.+..+.   .+.|+||||| ||+||||+
T Consensus         2 ~~Iy~~~~~--~~~C~~C~~AK~lL~~~~i~y~~~~i~~~~~~~~~~~~~e~~~~~~~~~~~~~TvPqIfi~dg~~IGG~   79 (87)
T d1abaa_           2 FKVYGYDSN--IHKCGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFAPDGSHIGGF   79 (87)
T ss_dssp             EEEEECCTT--TSCCHHHHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEECTTSCEEESH
T ss_pred             EEEEEeCCC--CCCChhHHHHHHHHHHcCCCceeccccccccccCHHHHHHHHHHhcccCCCCceeCeEEecCCcEEECH
Confidence            568887642  13489999999999999999999998653     5566777777653   3489999999 69999999


Q ss_pred             hHHHHHHh
Q 048504          202 DVLKSMYE  209 (277)
Q Consensus       202 del~~L~E  209 (277)
                      ++|+++++
T Consensus        80 del~e~~k   87 (87)
T d1abaa_          80 DQLREYFK   87 (87)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHHHhC
Confidence            99998753

>d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing protein C330018D20Rik {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin-like structure containing protein C330018D20Rik
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=2e-09  Score=82.42  Aligned_cols=79  Identities=9%  Similarity=0.175  Sum_probs=61.3

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEE--echhHHH
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHV--GNADVLK  205 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~I--GG~del~  205 (277)
                      ...|++|++.+|      +.|+.++.+|+.+.++|..+++..|.+..++|.++.|.   .+|+|||||+.+  |..+   
T Consensus        16 ~p~i~lft~~~C------~~C~~a~~~L~~~~~~~~~~~v~vd~~~~~~l~~~y~~---~VPvl~idg~~~~~g~~d---   83 (100)
T d1wjka_          16 LPVLTLFTKAPC------PLCDEAKEVLQPYKDRFILQEVDITLPENSTWYERYKF---DIPVFHLNGQFLMMHRVN---   83 (100)
T ss_dssp             CCEEEEEECSSC------HHHHHHHHHTSTTSSSSEEEEEETTSSTTHHHHHHSSS---SCSEEEESSSEEEESSCC---
T ss_pred             CCEEEEEECCCC------CChHHHHHHHHHhhhhcceEEEecccccCHHHHHHhcc---cCCceeecCceEEeCCCC---
Confidence            457999999875      89999999999999998777776666667889999875   399999999765  2333   


Q ss_pred             HHHhhccHHHHhcCCCC
Q 048504          206 SMYETGELARVLDGFPR  222 (277)
Q Consensus       206 ~L~EsGeL~klL~~~~~  222 (277)
                          ..+|++.|+.+..
T Consensus        84 ----~~~L~~~L~~l~~   96 (100)
T d1wjka_          84 ----TSKLEKQLRKLSG   96 (100)
T ss_dssp             ----HHHHHHHHHSSSC
T ss_pred             ----HHHHHHHHHHHhc
Confidence                3467788876554

>d1ttza_ c.47.1.1 (A:) Hypothetical protein XCC2852 {Xanthomonas campestris [TaxId: 339]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Hypothetical protein XCC2852
species: Xanthomonas campestris [TaxId: 339]

Probab=98.53  E-value=2.1e-07  Score=68.44  Aligned_cols=73  Identities=14%  Similarity=0.068  Sum_probs=53.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh-CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHHh
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG-FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYE  209 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~-~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~E  209 (277)
                      |+|||++.      |+.|..|+++|.. .++.|.++||+.|+    +|.++.|.   .+|+|.++|..+-+.     -.+
T Consensus         2 ltLyt~~~------C~LCe~A~~~l~~~~~~~~~~vdI~~d~----~l~~~y~~---~IPVl~~~~~~~l~w-----~fd   63 (75)
T d1ttza_           2 LTLYQRDD------CHLCDQAVEALAQARAGAFFSVFIDDDA----ALESAYGL---RVPVLRDPMGRELDW-----PFD   63 (75)
T ss_dssp             EEEEECSS------CHHHHHHHHHHHHTTCCCEEEEECTTCH----HHHHHHTT---TCSEEECTTCCEEES-----CCC
T ss_pred             EEEECCCC------ccHHHHHHHHHHhccCCcEEEEEccCCH----HHHHHhCC---eeeEEEECCeeEEcC-----ccC
Confidence            79999986      5899999997755 68999999999986    56677775   489999976443331     012


Q ss_pred             hccHHHHhcCCC
Q 048504          210 TGELARVLDGFP  221 (277)
Q Consensus       210 sGeL~klL~~~~  221 (277)
                      ..+|+++|+++|
T Consensus        64 ~~~l~~~L~~~~   75 (75)
T d1ttza_          64 APRLRAWLDAAP   75 (75)
T ss_dssp             HHHHHHHHHTCC
T ss_pred             HHHHHHHHhcCC
Confidence            345777776643

>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: PDI-like
domain: Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.28  E-value=1.1e-06  Score=65.92  Aligned_cols=66  Identities=20%  Similarity=0.180  Sum_probs=50.8

Q ss_pred             ccCCCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCE
Q 048504          122 IRLPGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGK  196 (277)
Q Consensus       122 i~~~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~  196 (277)
                      |....+...|++|+++||      ++|+.+..+|+.+     .|.+..+|++.+++    +.+..|-  ..+|.+|+||+
T Consensus        10 ik~l~~~~~i~~F~s~~C------~~C~~~~p~~~~~a~~~~~i~~~~vd~~~~~~----l~~~~~I--~~vPt~~~ng~   77 (96)
T d1hyua4          10 IRDIDGDFEFETYYSLSC------HNCPDVVQALNLMAVLNPRIKHTAIDGGTFQN----EITERNV--MGVPAVFVNGK   77 (96)
T ss_dssp             HHHCCSCEEEEEEECTTC------SSHHHHHHHHHHHHHHCTTEEEEEEETTTCHH----HHHHTTC--CSSSEEEETTE
T ss_pred             HHhcCCCeEEEEEECCCC------cchHHHHHHHHHHHHhCCceEEEEEecccchH----HHhhccc--ccccEEEECCE
Confidence            333344556888999886      6999999999864     58899999998864    4455654  78999999999


Q ss_pred             EEe
Q 048504          197 HVG  199 (277)
Q Consensus       197 ~IG  199 (277)
                      .++
T Consensus        78 ~~~   80 (96)
T d1hyua4          78 EFG   80 (96)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            875

>d1g7oa2 c.47.1.5 (A:1-75) Glutaredoxin 2 {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Glutaredoxin 2
species: Escherichia coli [TaxId: 562]

Probab=98.11  E-value=5.9e-06  Score=59.59  Aligned_cols=68  Identities=15%  Similarity=0.149  Sum_probs=56.2

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe-CCEEEechhHHHHHHh
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI-RGKHVGNADVLKSMYE  209 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI-~G~~IGG~del~~L~E  209 (277)
                      -||+...      ||+|++|+.+|..+||+|+.+++..+  ..+++.++.+.  .+||++.. ||+.|.+..++.+..+
T Consensus         2 kLY~~~~------cP~~~rvr~~l~~kgi~~e~~~~~~~--~~~~~~~~~p~--~~VP~L~~~dg~~i~eS~~I~~yLd   70 (75)
T d1g7oa2           2 KLYIYDH------CPYCLKARMIFGLKNIPVELHVLLND--DAETPTRMVGQ--KQVPILQKDDSRYMPESMDIVHYVD   70 (75)
T ss_dssp             EEEECTT------CHHHHHHHHHHHHHTCCCEEEECCTT--TTHHHHHHHSS--SCCCEEEETTTEEEECHHHHHHHHH
T ss_pred             EEEccCC------CCchHHHHHHHHHhCCCccccccccc--chHHHHHhCCC--CceEEEEEcCCCEEecHHHHHHHHH
Confidence            4788764      69999999999999999999988655  34677888876  79999987 6799999998887544

>d1gwca2 c.47.1.5 (A:4-86) Class tau GST {Aegilops tauschii, also known as Triticum tauschii [TaxId: 37682]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class tau GST
species: Aegilops tauschii, also known as Triticum tauschii [TaxId: 37682]

Probab=97.94  E-value=1.4e-05  Score=57.59  Aligned_cols=72  Identities=8%  Similarity=-0.010  Sum_probs=55.9

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      +++.||....      ||+|++||.+|..+||+|+.++|..... .+++.++... ...+|.+..||..|.....+.+..
T Consensus         2 ~~mkLy~~~~------sp~~~rvr~~l~~kgi~~e~~~v~~~~~-~~~~~~~~~~-~~~~p~l~~dg~~i~eS~~I~~YL   73 (83)
T d1gwca2           2 DDLKLLGAWP------SPFVTRVKLALALKGLSYEDVEEDLYKK-SELLLKSNPV-HKKIPVLIHNGAPVCESMIILQYI   73 (83)
T ss_dssp             CCEEEEECTT------CHHHHHHHHHHHHHTCCCEEEECCTTSC-CHHHHHHSTT-TCCSCEEEETTEEEESHHHHHHHH
T ss_pred             CeEEEEecCC------ChHHHHHHHHHHHCCCCeEEEEEeccch-hHHHHHHHhc-cCCCceeecCCceEcCHHHHHHHH
Confidence            3588998864      6999999999999999999998875422 2445555542 257899999999999888877653

>d1oyja2 c.47.1.5 (A:2-85) Class tau GST {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class tau GST
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.85  E-value=3e-05  Score=57.04  Aligned_cols=75  Identities=12%  Similarity=0.062  Sum_probs=58.5

Q ss_pred             CCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          127 TEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       127 ~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      .+++++||...      .||+|++||.+|..+||+|+.+.++... -.+++.++... ..++|.+..||..|-+...+.+
T Consensus         2 ~~~~l~Ly~~~------~Sp~~~rvr~~L~~kgi~~e~~~v~~~~-~~~~~~~~nP~-~g~vP~L~~~g~~l~eS~~I~~   73 (84)
T d1oyja2           2 EEKELVLLDFW------VSPFGQRCRIAMAEKGLEFEYREEDLGN-KSDLLLRSNPV-HRKIPVLLHAGRPVSESLVILQ   73 (84)
T ss_dssp             CSCCEEEEECT------TCHHHHHHHHHHHHHTCCCEEEECCTTS-CCHHHHHHSTT-TCCSCEEEETTEEEESHHHHHH
T ss_pred             CCCceEEEcCC------CChHHHHHHHHHHHcCCCcEEEEEccCc-CCHHHHhhCCC-cCcccEEEECCceEEcHHHHHH
Confidence            36789999875      4699999999999999999988887542 23566666532 1579999999999988888776


Q ss_pred             HHh
Q 048504          207 MYE  209 (277)
Q Consensus       207 L~E  209 (277)
                      ..+
T Consensus        74 YL~   76 (84)
T d1oyja2          74 YLD   76 (84)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            544

>d1k0ma2 c.47.1.5 (A:6-91) Chloride intracellular channel 1 (clic1) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Chloride intracellular channel 1 (clic1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=2.7e-05  Score=57.65  Aligned_cols=77  Identities=10%  Similarity=0.084  Sum_probs=59.3

Q ss_pred             cEEEEEecCCC--CCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRG--IRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcg--iR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      .+.||.+....  ....||+|++|+.+|..+||+|+.+.|++.. ..++++++...  ..+|.+..||..|.+...+.+.
T Consensus         2 ~i~l~~ka~~dg~~~~~cPf~~rv~~~L~~kgi~~~~~~v~~~~-~~~~~~~~nP~--~~vPvL~~~~~~i~eS~~I~~Y   78 (86)
T d1k0ma2           2 QVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKR-RTETVQKLCPG--GELPFLLYGTEVHTDTNKIEEF   78 (86)
T ss_dssp             CEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEECTTS-CCHHHHHHCTT--CCSSEEEETTEEEECHHHHHHH
T ss_pred             cEEEEEecCCCcCcCCCCHhHHHHHHHHHHHCCCcEEEEeeccc-ccHHHHHHhcc--CceeEEEEcccccccHHHHHHH
Confidence            36788776431  1136999999999999999999888887542 33578888755  6899999999999998887765


Q ss_pred             Hh
Q 048504          208 YE  209 (277)
Q Consensus       208 ~E  209 (277)
                      .|
T Consensus        79 Le   80 (86)
T d1k0ma2          79 LE   80 (86)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>d1eema2 c.47.1.5 (A:5-102) Class omega GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class omega GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=1.7e-05  Score=60.00  Aligned_cols=76  Identities=9%  Similarity=0.085  Sum_probs=58.1

Q ss_pred             CCCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe-CCEEEechhH
Q 048504          125 PGTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI-RGKHVGNADV  203 (277)
Q Consensus       125 ~~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI-~G~~IGG~de  203 (277)
                      +...+.+.||....      ||+|++|+.+|..+||+|+.+.|+... ..+++.++...  .++|.+.. +|..|.+...
T Consensus        14 ~~~~~~~~Ly~~~~------sP~~~rv~~~l~~kgi~~e~~~v~~~~-~~~~~~~~nP~--g~VPvL~~~dg~~i~eS~a   84 (98)
T d1eema2          14 PVPEGSIRIYSMRF------CPFAERTRLVLKAKGIRHEVININLKN-KPEWFFKKNPF--GLVPVLENSQGQLIYESAI   84 (98)
T ss_dssp             CCCTTCEEEEECTT------CHHHHHHHHHHHHTTCCEEEEEBCTTS-CCGGGGGTCTT--CCSCEEEETTCCEEESHHH
T ss_pred             CCCCCcEEEEcCCC------ChHHHHHHHHHHHhCCCCEEEEecccC-CcHHHHhhhcc--ccceeEEeCCCCEEcCHHH
Confidence            44567899999875      589999999999999999988886532 22455666544  68999988 4788888877


Q ss_pred             HHHHHh
Q 048504          204 LKSMYE  209 (277)
Q Consensus       204 l~~L~E  209 (277)
                      +.+..+
T Consensus        85 I~~YL~   90 (98)
T d1eema2          85 TCEYLD   90 (98)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            776543

>d1e6ba2 c.47.1.5 (A:8-87) Class zeta GST {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class zeta GST
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.79  E-value=5.4e-05  Score=54.70  Aligned_cols=71  Identities=8%  Similarity=0.029  Sum_probs=55.9

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCC--CHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSM--DSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~--d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      ++.||....      |++|++|+.+|+.+||+|+.+.|+.  ......++.++...  .++|.+..||..|-+...+.+.
T Consensus         1 ~m~Ly~~~~------sp~~~kv~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~--~~vPvL~~~~~~l~eS~aI~~y   72 (80)
T d1e6ba2           1 KLKLYSYWR------SSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKINPM--GTVPALVDGDVVINDSFAIIMY   72 (80)
T ss_dssp             CCEEEECTT------CHHHHHHHHHHHHTTCCCEEEECCTTTTGGGCHHHHHHCTT--CCSSEEEETTEEEESHHHHHHH
T ss_pred             CEEEEeCCC------ChHHHHHHHHHHHhCCCCEEEEEeccccccccHHHhhcCcc--ccCCEEEECCEEEECHHHHHHH
Confidence            467888765      5899999999999999999888764  33344667776644  6899999999998888777664


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        73 L   73 (80)
T d1e6ba2          73 L   73 (80)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1v2aa2 c.47.1.5 (A:1-83) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-6 [TaxId: 123217]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class delta GST
species: Mosquito (Anopheles dirus b), isozyme 1-6 [TaxId: 123217]

Probab=97.78  E-value=7e-05  Score=54.36  Aligned_cols=68  Identities=12%  Similarity=0.188  Sum_probs=56.0

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCC-CHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSM-DSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~-d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      .||....      +++|++|+.+|+.+||+|+.+.|+. ..+.++++.++...  .++|.+..||..|-....+.+.
T Consensus         2 ~LY~~~~------Sp~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~nP~--g~VP~L~~~g~~l~eS~aI~~Y   70 (83)
T d1v2aa2           2 DYYYSLI------SPPCQSAILLAKKLGITLNLKKTNVHDPVERDALTKLNPQ--HTIPTLVDNGHVVWESYAIVLY   70 (83)
T ss_dssp             EEEECTT------CHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCTT--CCSCEEEETTEEEESHHHHHHH
T ss_pred             EEECCCC------ChHHHHHHHHHHHhCCCceEEEEeCCCCcchHHHHHHhhc--cCCCEEEEccceeEcHHHHHHH
Confidence            5888875      4899999999999999999888874 44567788877654  6899999999999888777764

>d1z9ha2 c.47.1.5 (A:100-212) Microsomal prostaglandin E synthase-2 {Crab-eating macaque (Macaca fascicularis) [TaxId: 9541]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Microsomal prostaglandin E synthase-2
species: Crab-eating macaque (Macaca fascicularis) [TaxId: 9541]

Probab=97.53  E-value=5e-05  Score=58.23  Aligned_cols=69  Identities=13%  Similarity=0.136  Sum_probs=52.6

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe----CCEEEechhHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI----RGKHVGNADVLK  205 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI----~G~~IGG~del~  205 (277)
                      +++||....      ||+|++||.+|+.+||+|+.++++....  +++ ...+.  .++|++.+    +|+.|++..++.
T Consensus         2 ~i~LY~~~~------sP~~~kvr~~L~~k~l~~~~~~v~~~~~--~~~-~~~~~--~~vP~l~~~~~~~g~~i~eS~~Ii   70 (113)
T d1z9ha2           2 QLTLYQYKT------CPFCSKVRAFLDFHALPYQVVEVNPVLR--AEI-KFSSY--RKVPILVAQEGESSQQLNDSSVII   70 (113)
T ss_dssp             EEEEEECTT------CHHHHHHHHHHHHTTCCEEEEECCTTTC--GGG-TTCSC--CSSCEEEEEETTEEEEECSHHHHH
T ss_pred             EEEEEcCCC------ChHHHHHHHHHHHcCCeeEEeccCcccc--hhh-ccCcc--ccccccccccCCCceEeecHHHHH
Confidence            489999864      6999999999999999999999875422  222 23333  78999875    358999999988


Q ss_pred             HHHh
Q 048504          206 SMYE  209 (277)
Q Consensus       206 ~L~E  209 (277)
                      +..+
T Consensus        71 ~YL~   74 (113)
T d1z9ha2          71 SALK   74 (113)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7544

>d1k0da2 c.47.1.5 (A:109-200) Yeast prion protein ure2p, nitrogen regulation fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Yeast prion protein ure2p, nitrogen regulation fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.46  E-value=0.00029  Score=52.10  Aligned_cols=73  Identities=5%  Similarity=0.068  Sum_probs=55.5

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEe---CCEEEechh
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFI---RGKHVGNAD  202 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI---~G~~IGG~d  202 (277)
                      +..++||....      ||+|.+|+.+|+.+||+|+.+.|+...  ....++.++...  .++|.+..   ||..|....
T Consensus         3 ~~~~tLY~~~~------sp~~~kV~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~np~--g~vP~L~d~~~~~~~l~ES~   74 (92)
T d1k0da2           3 LEGYTLFSHRS------APNGFKVAIVLSELGFHYNTIFLDFNLGEHRAPEFVSVNPN--ARVPALIDHGMDNLSIWESG   74 (92)
T ss_dssp             SSSEEEEECTT------CHHHHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHHTTCTT--CCSCEEEEGGGTTEEEESHH
T ss_pred             CCceEEeeCCC------CccHHHHHHHHHHcCCCCEEEEeeccCCcccCHHHHHHhhc--cccceeEEecccceEEcCHH
Confidence            45699999875      589999999999999999988876543  233566666544  68999986   788887777


Q ss_pred             HHHHHH
Q 048504          203 VLKSMY  208 (277)
Q Consensus       203 el~~L~  208 (277)
                      .+.+..
T Consensus        75 aI~~YL   80 (92)
T d1k0da2          75 AILLHL   80 (92)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            666543

>d1fw1a2 c.47.1.5 (A:5-87) Class zeta GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class zeta GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=0.0004  Score=50.34  Aligned_cols=70  Identities=11%  Similarity=0.125  Sum_probs=54.5

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC----HHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD----SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d----~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      -|||.-..+      ++|.+|+.+|..+||+|+.+.|+..    .....++.++...  .++|.+..||..|.....+.+
T Consensus         2 piLY~~~~S------~~s~rvr~~L~ekgi~~e~~~v~l~~~~~~~~~~~~~~~nP~--g~vP~L~~~g~~i~eS~aI~~   73 (83)
T d1fw1a2           2 PILYSYFRS------SCSWRVRIALALKGIDYKTVPINLIKDGGQQFSKDFQALNPM--KQVPTLKIDGITIHQSLAIIE   73 (83)
T ss_dssp             CEEEECTTC------HHHHHHHHHHHHTTCCCEEEECCSSTTSCGGGSHHHHHHCTT--CCSCEEEETTEEEESHHHHHH
T ss_pred             CEEEcCCCC------hHHHHHHHHHHHhCCCCEEEeccccccccccCCHHHHHhccC--CccCEEEECCEEEecHHHHHH
Confidence            468988754      7999999999999999988776532    2234677777654  689999999999888877776


Q ss_pred             HH
Q 048504          207 MY  208 (277)
Q Consensus       207 L~  208 (277)
                      ..
T Consensus        74 yL   75 (83)
T d1fw1a2          74 YL   75 (83)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>d1aw9a2 c.47.1.5 (A:2-82) Class phi GST {Maize (Zea mays), type III [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class phi GST
species: Maize (Zea mays), type III [TaxId: 4577]

Probab=97.41  E-value=6.1e-05  Score=54.53  Aligned_cols=71  Identities=7%  Similarity=0.042  Sum_probs=54.6

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      ++.||....      +++|++|+.+|..+||+|+.++|+..  ....+++.++...  .++|.+..||..|.....+.+.
T Consensus         2 pm~Ly~~~~------sp~~~~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~~~~~~l~eS~aI~~Y   73 (81)
T d1aw9a2           2 PLKLYGMPL------SPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPF--GQIPALVDGDEVLFESRAINRY   73 (81)
T ss_dssp             CEEEESCTT------CHHHHHHHHHHHHTTCCEEEECCCSSTTSSCCCSGGGTCTT--CCSCEEEETTEEEESHHHHHHH
T ss_pred             CEEEEeCCC------ChhHHHHHHHHHhcCCCCEEEEecCCCcchhhHHHHHHhhc--CeeEEEEECCcEEECHHHHHHH
Confidence            478998765      58999999999999999999887643  2233455555543  6899999999999888777764


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        74 L   74 (81)
T d1aw9a2          74 I   74 (81)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1r5aa2 c.47.1.5 (A:2-86) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-5 [TaxId: 123217]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class delta GST
species: Mosquito (Anopheles dirus b), isozyme 1-5 [TaxId: 123217]

Probab=97.33  E-value=0.0005  Score=50.11  Aligned_cols=69  Identities=16%  Similarity=0.196  Sum_probs=55.0

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCC--CHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSM--DSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~--d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      ++||....+      ++|++|+.+|+.+|++|+.+.|+.  .....+++.++...  .++|.+-.||..|.....+.+.
T Consensus         2 ~iLY~~~~S------~~~~~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~~~~~~l~ES~aI~~Y   72 (85)
T d1r5aa2           2 TVLYYLPAS------PPCRSVLLLAKMIGVELDLKVLNIMEGEQLKPDFVELNPQ--HCIPTMDDHGLVLWESRVILSY   72 (85)
T ss_dssp             EEEEECTTC------HHHHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHHTTCTT--CCSSEEEETTEEEECHHHHHHH
T ss_pred             EEEEcCCCC------HhHHHHHHHHHHcCCCCEEEEecCCCcccCCHHHHHHHhc--CCCCEEEEcccceecHHHHHHH
Confidence            789999864      799999999999999999887764  33455677777644  6899999999988877776654

>d1axda2 c.47.1.5 (A:1-80) Class phi GST {Maize (Zea mays), type I [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class phi GST
species: Maize (Zea mays), type I [TaxId: 4577]

Probab=97.28  E-value=0.00026  Score=51.08  Aligned_cols=71  Identities=4%  Similarity=-0.132  Sum_probs=55.5

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      ++.||....+      ++|++|+.+|+.+||+|+.++|+...  ....++.++...  .++|.+..||..|.....+.+.
T Consensus         2 p~~Ly~~~~S------~~~~kv~~~L~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~--g~VP~L~~~~~~l~ES~aI~~Y   73 (80)
T d1axda2           2 PMKLYGAVMS------WNLTRCATALEEAGSDYEIVPINFATAEHKSPEHLVRNPF--GQVPALQDGDLYLFESRAICKY   73 (80)
T ss_dssp             CEEEESCTTC------TTHHHHHHHHHHHTCCEEEECCCTTTTGGGSHHHHTTCTT--CCSCEEEETTEEEESHHHHHHH
T ss_pred             CEEEEECCCC------hHHHHHHHHHHHcCCCCEEEEecCCccchhhHHHHHhhcc--ccCCEEEECCEEEECHHHHHHH
Confidence            5889998865      69999999999999999988886532  234566666544  6899999999888887777664


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        74 L   74 (80)
T d1axda2          74 A   74 (80)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1ljra2 c.47.1.5 (A:1-79) Class theta GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class theta GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=0.0004  Score=49.43  Aligned_cols=70  Identities=13%  Similarity=0.090  Sum_probs=54.7

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMY  208 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L~  208 (277)
                      +.||....+      ++|++|+.+|+.+||+|+.+.|+...  ...+++.+....  ..+|.+..||..|-....+.+..
T Consensus         3 m~LY~~~~s------p~~r~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~np~--g~vP~L~d~~~~l~ES~aI~~yL   74 (79)
T d1ljra2           3 LELFLDLVS------QPSRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSL--GKLPTLKDGDFILTESSAILIYL   74 (79)
T ss_dssp             CEEEECTTS------HHHHHHHHHHHHTTCCCEEEECCTTTTGGGSHHHHTTCTT--CCSCEEEETTEEEECHHHHHHHH
T ss_pred             EEEeeCCCC------hHHHHHHHHHHHhCCCCEEEeeeccccccCCHHHHHhhhh--cceeEEEeCCcEEEcHHHHHHHH
Confidence            578988764      89999999999999999988876542  344566666544  78999999999888877776643

>d2a2ra2 c.47.1.5 (A:1-77) Class pi GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class pi GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.0018  Score=45.71  Aligned_cols=70  Identities=16%  Similarity=0.131  Sum_probs=52.2

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      ++.||.-..+      ..|+.+|.+|...||+|+++.|+.+.....+.....-  ..++|.+..||..|.....+.+.
T Consensus         2 ~~~L~yf~~~------g~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~p--~g~vP~L~~~g~~i~eS~aI~~y   71 (77)
T d2a2ra2           2 PYTVVYFPVR------GRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCL--YGQLPKFQDGDLTLYQSNTILRH   71 (77)
T ss_dssp             SEEEEECSSS------GGGHHHHHHHHHTTCCEEEEECCHHHHHHSHHHHHST--TSCSCEEEETTEEEECHHHHHHH
T ss_pred             CEEEEEcCCc------hhHHHHHHHHHHcCCCcEEEEecccccccccccccCC--CCCCCEEEECCEeeecHHHHHHH
Confidence            4677777765      4899999999999999999999765433223333322  25799999999999888777654

>d1gnwa2 c.47.1.5 (A:2-85) Class phi GST {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class phi GST
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.94  E-value=0.00065  Score=49.26  Aligned_cols=69  Identities=9%  Similarity=-0.059  Sum_probs=52.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +.||....      +++|++|+.+|+.+||+|+.+.|+..  ....+++.++...  .++|.+..||..|-....+.+.
T Consensus         2 ~kLY~~~~------s~~~~~v~~~l~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~~~~~~l~ES~aI~~Y   72 (84)
T d1gnwa2           2 IKVFGHPA------SIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPF--GQVPAFEDGDLKLFESRAITQY   72 (84)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSTTGGGTCTT--CCSCEEEETTEEEECHHHHHHH
T ss_pred             eEEEeCCC------ChHHHHHHHHHHHcCCCcEeecccCCcccccHHHHHHHhhc--CcceEEEECCcEEecHHHHHHH
Confidence            67898875      58999999999999999998887643  2233455555533  6899999999988776666553

>d1jlva2 c.47.1.5 (A:1-84) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-3 [TaxId: 123217]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class delta GST
species: Mosquito (Anopheles dirus b), isozyme 1-3 [TaxId: 123217]

Probab=96.89  E-value=0.0023  Score=46.40  Aligned_cols=68  Identities=15%  Similarity=0.117  Sum_probs=52.2

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      .||....      +++|++|+.+|+.+||+|+.+.|+..  .....++.++...  .++|.+..||..|-....+.+.
T Consensus         2 kLY~~~~------S~~~~~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~--g~vP~L~d~~~~l~ES~aI~~y   71 (84)
T d1jlva2           2 DFYYLPG------SAPCRAVQMTAAAVGVELNLKLTNLMAGEHMKPEFLKINPQ--HCIPTLVDNGFALWESRAICTY   71 (84)
T ss_dssp             EEEECTT------CHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHHCTT--CCSCEEEETTEEEESHHHHHHH
T ss_pred             EEEcCCC------CHHHHHHHHHHHHcCCCCEEEEecCCCCccCCHHHHHHhcc--ccCCEEEECCEEEEcHHHHHHH
Confidence            5788775      48999999999999999998888642  3344577777654  6899999888877766666553

>d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: PDI-like
domain: Protein disulfide isomerase, PDI
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=96.78  E-value=0.0033  Score=45.97  Aligned_cols=55  Identities=18%  Similarity=0.308  Sum_probs=39.3

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC----------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEE
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF----------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKH  197 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~----------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~  197 (277)
                      |++|+++||      ++|++++.+|+.+          .|.+..+|+..++    +|.+..|-  ..+|.+++  +|+.
T Consensus        19 i~~F~a~wC------~~C~~~~p~~~~la~~~~~~~~~~v~~~~id~~~~~----~l~~~~~V--~~vPTi~i~~~G~~   85 (107)
T d1a8la2          19 ILVFVTPTC------PYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYP----EWADQYNV--MAVPKIVIQVNGED   85 (107)
T ss_dssp             EEEEECSSC------TTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCH----HHHHHTTC--CSSCEEEEEETTEE
T ss_pred             EEEEEcCcc------ccchhhChhHHhhhhhhhhccCCcEEEEEecccccc----cccccccc--ccceEEEEEeCCeE
Confidence            455888886      6999998888653          4677888988775    45566664  78898865  5643

>d1z3ea1 c.47.1.12 (A:1-114) Regulatory protein Spx {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: ArsC-like
domain: Regulatory protein Spx
species: Bacillus subtilis [TaxId: 1423]

Probab=96.54  E-value=0.0016  Score=49.84  Aligned_cols=46  Identities=13%  Similarity=0.270  Sum_probs=39.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhC
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG  182 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG  182 (277)
                      |+||..+.      |..|++|+++|+.+||+|+.+|+..++--.++|.+++.
T Consensus         2 i~ly~~~~------C~~~rka~~~L~~~~i~~~~~d~~~~p~s~~eL~~ll~   47 (114)
T d1z3ea1           2 VTLYTSPS------CTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILR   47 (114)
T ss_dssp             EEEEECTT------CHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHH
T ss_pred             EEEEcCCC------CHHHHHHHHHHHHCCCCeEEEeeeccCCCHHHHHHHHH
Confidence            68999985      57999999999999999999999988766677777763

>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like protein {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: MTH807, thioredoxin/glutaredoxin-like protein
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.49  E-value=0.00075  Score=48.31  Aligned_cols=60  Identities=20%  Similarity=0.330  Sum_probs=45.6

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCE--EEech
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGK--HVGNA  201 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~--~IGG~  201 (277)
                      +|++|+++||      +.|++++.+|+..      .|.+..+|++.+++    |.+.+|-  ..+|.++++|+  ++|..
T Consensus         4 ~v~~F~a~wC------~~C~~~~p~~~~l~~~~~~~v~~~~vd~d~~~~----l~~~~~V--~~~Pt~~~~~~~~~~G~~   71 (85)
T d1nhoa_           4 NIEVFTSPTC------PYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDRE----KAIEYGL--MAVPAIAINGVVRFVGAP   71 (85)
T ss_dssp             CEEEESCSSS------CCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGG----GGGGTCS--SCSSEEEETTTEEEECSS
T ss_pred             EEEEEECCCC------cchHHHHHHHhhhcccccccccccccccccchh----hHHhcCc--eEeCEEEECCcEEEEcCC
Confidence            5889999987      5999988888752      48888999988765    3444554  78999999885  56653

>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: ArsC-like
domain: Hypothetical protein PA3664 (YffB)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.33  E-value=0.00078  Score=51.52  Aligned_cols=44  Identities=16%  Similarity=0.098  Sum_probs=35.1

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCV  180 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~  180 (277)
                      |+||+.+.      |.-|++|+++|+.+||+|+++|+..++--.++|.++
T Consensus         2 ~~iY~~p~------Cs~srka~~~L~~~~i~~~~idy~k~pls~~eL~~l   45 (114)
T d1rw1a_           2 YVLYGIKA------CDTMKKARTWLDEHKVAYDFHDYKAVGIDREHLRRW   45 (114)
T ss_dssp             EEEEECSS------CHHHHHHHHHHHHTTCCEEEEEHHHHCCCHHHHHHH
T ss_pred             EEEEECCC------ChHHHHHHHHHHHcCCCeEEEEccccCCCHHHHHHH
Confidence            79999986      479999999999999999999997654333444444

>d2cvda2 c.47.1.5 (A:2-75) Class sigma GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class sigma GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.0094  Score=41.90  Aligned_cols=68  Identities=10%  Similarity=0.172  Sum_probs=51.6

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      ++.||.-..+      ..|+.+|.+|...||+|+++++..+.  ..+.++...  ..++|.+.+||..|.....+.+.
T Consensus         2 ~~kL~yf~~~------~~~~~vRl~L~~~gi~~e~~~~~~~~--~~~~~~~~p--~g~vP~L~~~g~~l~qS~AI~~y   69 (74)
T d2cvda2           2 NYKLTYFNMR------GRAEIIRYIFAYLDIQYEDHRIEQAD--WPEIKSTLP--FGKIPILEVDGLTLHQSLAIARY   69 (74)
T ss_dssp             CEEEEEESSS------GGGHHHHHHHHHTTCCCEEEEECGGG--HHHHHTTST--TSCSCEEEETTEEEECHHHHHHH
T ss_pred             cEEEEEcCCc------HHHHHHHHHHHHcCCCCEeccccccc--chhhcccCC--CCCcCEEEECCEEEEcHHHHHHH
Confidence            4677777765      49999999999999999999987542  344444432  36899999999988877766653

>d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like protein {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: MJ0307, thioredoxin/glutaredoxin-like protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.96  E-value=0.0014  Score=46.35  Aligned_cols=60  Identities=18%  Similarity=0.400  Sum_probs=40.1

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCC--EEEech
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRG--KHVGNA  201 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G--~~IGG~  201 (277)
                      .|++|+++||      +.|+.+...|+.    +  .+.+..+|.+.++++    .+..|-  ..+|.+++++  +++|..
T Consensus         5 ~v~~F~a~wC------~~C~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l----a~~~~V--~~~Pt~~i~~~g~~~G~~   72 (85)
T d1fo5a_           5 KIELFTSPMC------PHCPAAKRVVEEVANEMPDAVEVEYINVMENPQK----AMEYGI--MAVPTIVINGDVEFIGAP   72 (85)
T ss_dssp             EEEEEECCCS------SCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCT----TTSTTT--CCSSEEEETTEEECCSSS
T ss_pred             EEEEEECCCC------cChHhhhhhccccccccccccccccccccccccc----cccCCc--eEeeEEEEECCcEEECCC
Confidence            4777899987      588877777754    3  355667777766443    334443  7899998865  466653

>d1gula2 c.47.1.5 (A:4-80) Class alpha GST {Human (Homo sapiens), (a1-1) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class alpha GST
species: Human (Homo sapiens), (a1-1) [TaxId: 9606]

Probab=95.83  E-value=0.024  Score=39.78  Aligned_cols=70  Identities=19%  Similarity=0.071  Sum_probs=48.7

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      .+||.-+.++      .++.+|.+|...||+|+++-+....... ...........++|.+-+||..|.....+.+.
T Consensus         2 pkL~yf~~~g------~~~~vR~~L~~~gi~ye~~~~~~~~~~~-~~~~~~~~p~g~lPvL~~~g~~l~eS~AI~~y   71 (77)
T d1gula2           2 PKLHYPNGRG------RMESVRWVLAAAGVEFDEEFLETKEQLY-KLQDGNHLLFQQVPMVEIDGMKLVQTRSILHY   71 (77)
T ss_dssp             CEEEEESSCT------TTHHHHHHHHHTTCCCEEEEECSHHHHH-HHHHTTCSTTSCSCEEEETTEEEESHHHHHHH
T ss_pred             CEEEEcCCcc------hHHHHHHHHHHcCCCceEEeeccccccc-hhhhcccCCCCCCCEEEECCEeeecHHHHHHH
Confidence            4566666553      8899999999999999988876543322 22222222236799999999988777666553

>d1okta2 c.47.1.5 (A:1-85) Pf GST {Malarial parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Pf GST
species: Malarial parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.75  E-value=0.033  Score=39.43  Aligned_cols=72  Identities=15%  Similarity=0.219  Sum_probs=51.3

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHH---HHHHHhCCCCCCCcEEEeCCEEEechhHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKK---ELQCVFGGKNVTLPQVFIRGKHVGNADVLK  205 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~re---ELke~lG~~~~tvPqVFI~G~~IGG~del~  205 (277)
                      +++++|.-..+|      .++.+|.+|+..||+|+++.++.+.....   .+.........++|.+-+||..|.....+.
T Consensus         3 ~~i~L~Y~~~~g------r~e~irl~L~~~gi~ye~~~~~~~~~~~~~~~~~~~~~~~p~g~lP~l~~~g~~l~eS~AI~   76 (85)
T d1okta2           3 DNIVLYYFDARG------KAELIRLIFAYLGIEYTDKRFGVNGDAFVEFKNFKKEKDTPFEQVPILQIGDLILAQSQAIV   76 (85)
T ss_dssp             CCEEEEEESSST------TTHHHHHHHHHHTCCCEEEEETSSSCHHHHHHHHHHHSCCSSSCSCEEEETTEEEECHHHHH
T ss_pred             CCeEEEEcCCch------hhHHHHHHHHHcCCCceEEEEcccccchhhhhhhhhcccccCCCCCeeecCCCEEecHHHHH
Confidence            578997766654      88999999999999999887765432222   222222222367999999999888776665


Q ss_pred             H
Q 048504          206 S  206 (277)
Q Consensus       206 ~  206 (277)
                      +
T Consensus        77 ~   77 (85)
T d1okta2          77 R   77 (85)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1r26a_ c.47.1.1 (A:) Thioredoxin {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.54  E-value=0.018  Score=43.11  Aligned_cols=57  Identities=16%  Similarity=0.180  Sum_probs=41.7

Q ss_pred             cEEE-EEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEE
Q 048504          130 RIVV-YLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHV  198 (277)
Q Consensus       130 kVVL-YttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~I  198 (277)
                      .|+| |+++||      +.|+.++..|+.+     +|.|..+|++.+++    +.+..|-  ..+|.+  |-+|+.+
T Consensus        28 ~vvv~F~a~wC------~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~----l~~~~~V--~~~Pt~~~~~~G~~v   92 (113)
T d1r26a_          28 LTVAWFTAVWC------GPCKTIERPMEKIAYEFPTVKFAKVDADNNSE----IVSKCRV--LQLPTFIIARSGKML   92 (113)
T ss_dssp             CEEEEEECTTC------HHHHHTHHHHHHHHHHCTTSEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEE
T ss_pred             eEEEEEECCCC------ccchhhceeccccccccccccccccccccchh----hHHHccc--cCCCEEEEEECCEEE
Confidence            3444 677875      7999999888763     78899999988764    5556664  678887  5688543

>d2gsqa2 c.47.1.5 (A:1-75) Class sigma GST {Squid (Ommastrephes sloani pacificus) [TaxId: 6634]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class sigma GST
species: Squid (Ommastrephes sloani pacificus) [TaxId: 6634]

Probab=95.50  E-value=0.021  Score=40.18  Aligned_cols=68  Identities=13%  Similarity=0.161  Sum_probs=52.2

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +..||.-..+      ..|+.+|.+|...||+|+++.+..+.  ..+++.....  .++|.+-+||..|.....+.+.
T Consensus         2 ~~~L~yf~~~------g~~~~iRl~L~~~gi~ye~~~~~~~~--~~~~~~~~p~--g~lPvL~~~g~~i~eS~aI~~y   69 (75)
T d2gsqa2           2 KYTLHYFPLM------GRAELCRFVLAAHGEEFTDRVVEMAD--WPNLKATMYS--NAMPVLDIDGTKMSQSMCIARH   69 (75)
T ss_dssp             CEEEEECSSS------GGGHHHHHHHHHTTCCCEEEECCTTT--HHHHGGGSGG--GSSCEEEETTEEECCHHHHHHH
T ss_pred             CEEEEecCCc------hhHHHHHHHHHHcCCCchhhcccccc--chhhhhcccc--CCcCEEEECCeeeecHHHHHHH
Confidence            4677777765      48999999999999999999887663  3444444332  5799999999998887776653

>d1thxa_ c.47.1.1 (A:) Thioredoxin {Anabaena sp., pcc 7120 [TaxId: 1167]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Anabaena sp., pcc 7120 [TaxId: 1167]

Probab=95.45  E-value=0.036  Score=40.33  Aligned_cols=58  Identities=10%  Similarity=0.151  Sum_probs=41.5

Q ss_pred             CcEEE-EEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          129 DRIVV-YLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       129 ~kVVL-YttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ..|+| |+++||      +.|+++..+|+..      .+.+..+|++.++.    |.+.++-  ..+|.+++  +|+.+
T Consensus        21 ~~vlv~f~a~wC------~~C~~~~~~~~~~~~~~~~~~~~~~vd~d~~~~----l~~~~~I--~~~Pt~~~~~~g~~v   87 (108)
T d1thxa_          21 QPVLVYFWASWC------GPCQLMSPLINLAANTYSDRLKVVKLEIDPNPT----TVKKYKV--EGVPALRLVKGEQIL   87 (108)
T ss_dssp             SCEEEEEECTTC------TTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHH----HHHHTTC--CSSSEEEEEETTEEE
T ss_pred             CcEEEEEECCCC------CCccccchHHHHHHHhcCCcceeceecccccHH----HHHHhcc--cCCCEEEEEECCEEE
Confidence            34544 667775      6999999888753      37788999998864    4555654  78998855  88744

>d1b48a2 c.47.1.5 (A:2-79) Class alpha GST {Mouse (Mus musculus), (a1-4) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class alpha GST
species: Mouse (Mus musculus), (a1-4) [TaxId: 10090]

Probab=95.40  E-value=0.013  Score=41.34  Aligned_cols=71  Identities=18%  Similarity=0.149  Sum_probs=49.6

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      |.+||.-..++      .|+.+|.+|...||+|+++.++..... +............+|.+.+||..|.....+.+.
T Consensus         3 K~kL~yf~~~~------~~~~vR~~L~~~gi~ye~~~~~~~~~~-~~~~~~~~~p~g~lPvL~~~g~~l~eS~AI~rY   73 (78)
T d1b48a2           3 KPKLYYFNGRG------RMESIRWLLAAAGVEFEEEFLETREQY-EKMQKDGHLLFGQVPLVEIDGMMLTQTRAILSY   73 (78)
T ss_dssp             CCEEEBCSSCT------TTHHHHHHHHHHTCCCCCCBCCCHHHH-HHHHTTTCSSSSCSCEEEETTEEECCHHHHHHH
T ss_pred             CcEEEEcCCch------HHHHHHHHHHHcCCCcEEEEEcchhhh-cchhhcccccCCCCCEEEeCCeEEECHHHHHHH
Confidence            45676666654      899999999999999998888754322 222222222235799999999988877666553

>d1k3ya2 c.47.1.5 (A:2-80) Class alpha GST {Human (Homo sapiens), (a1-1) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class alpha GST
species: Human (Homo sapiens), (a1-1) [TaxId: 9606]

Probab=95.31  E-value=0.053  Score=38.27  Aligned_cols=71  Identities=14%  Similarity=0.065  Sum_probs=50.0

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      |.+||.=..+|      .++.+|.+|...||+|+++.+..... .............++|.+-+||..|.....+.+.
T Consensus         3 k~kL~Yf~~~g------rae~irl~L~~~gv~yed~~~~~~~~-~~~~~~~~~~p~g~lPvl~~~g~~l~qS~AI~~Y   73 (79)
T d1k3ya2           3 KPKLHYFNARG------RMESTRWLLAAAGVEFEEKFIKSAED-LDKLRNDGYLMFQQVPMVEIDGMKLVQTRAILNY   73 (79)
T ss_dssp             CCEEEEESSST------TTHHHHHHHHHHTCCCEEEEECSHHH-HHHHHHTTCCTTSCSCEEEETTEEEESHHHHHHH
T ss_pred             CcEEEEcCCcH------HHHHHHHHHHHcCCCceEEEecchhh-hhhhcccccCCCCCCCEEEECCeEEEcHHHHHHH
Confidence            44555555654      88999999999999999888876433 2333333322346899999999988877666653

>d1ep7a_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii [TaxId: 3055]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Chlamydomonas reinhardtii [TaxId: 3055]

Probab=95.13  E-value=0.076  Score=39.24  Aligned_cols=57  Identities=18%  Similarity=0.318  Sum_probs=40.1

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~IG  199 (277)
                      ||.|+++||      +.|+.+...|+.    +  .|.|..+|++.+++    |.+.+|-  ..+|.+  |-+|+.|.
T Consensus        28 vv~f~a~wC------~~C~~~~p~~~~l~~~~~~~v~~~~vd~d~~~~----l~~~~~v--~~~Pt~~~~~~G~~v~   92 (112)
T d1ep7a_          28 VVDFTATWC------GPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAA----VAEAAGI--TAMPTFHVYKDGVKAD   92 (112)
T ss_dssp             EEEEECTTC------HHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHH----HHHHHTC--CBSSEEEEEETTEEEE
T ss_pred             EEEEEcCCc------CCCcccchhhhhhhhcccceEEEEEeecccccc----ccccccc--cCCCEEEEEECCEEEE
Confidence            444666665      799988888865    2  48899999988764    4555664  688886  55887543

>d1syra_ c.47.1.1 (A:) Thioredoxin {Malarial parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Malarial parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.07  E-value=0.047  Score=39.51  Aligned_cols=73  Identities=14%  Similarity=0.197  Sum_probs=47.7

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEEechhH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHVGNADV  203 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~IGG~de  203 (277)
                      ||.|+++||      +.|..+...|+.+     ++.|..+|++.+++    +.+.++-  ..+|.+  |.+|+.++-+.-
T Consensus        22 vv~F~a~wC------~~C~~~~~~~~~l~~~~~~~~~~~vd~d~~~~----~~~~~~V--~~~Pt~i~~k~G~~v~~~~G   89 (103)
T d1syra_          22 IVDFFAEWC------GPCKRIAPFYEECSKTYTKMVFIKVDVDEVSE----VTEKENI--TSMPTFKVYKNGSSVDTLLG   89 (103)
T ss_dssp             EEEEECTTC------HHHHHHHHHHHHHHHHCTTSEEEEEETTTTHH----HHHHTTC--CSSSEEEEEETTEEEEEEES
T ss_pred             EEEEeCCcc------cCcccccccchhhhhcccceEEEeeccccCcc----eeeeeee--ecceEEEEEECCEEEEEEeC
Confidence            344667665      7999888888753     67788999988764    4555654  789986  569976543321


Q ss_pred             HHHHHhhccHHHHhcC
Q 048504          204 LKSMYETGELARVLDG  219 (277)
Q Consensus       204 l~~L~EsGeL~klL~~  219 (277)
                      .    ...+|.++|+.
T Consensus        90 ~----~~~~l~~~i~k  101 (103)
T d1syra_          90 A----NDSALKQLIEK  101 (103)
T ss_dssp             C----CHHHHHHHHHT
T ss_pred             c----CHHHHHHHHHh
Confidence            1    11346677654

>d1dbya_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii [TaxId: 3055]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Chlamydomonas reinhardtii [TaxId: 3055]

Probab=94.97  E-value=0.068  Score=38.67  Aligned_cols=59  Identities=12%  Similarity=0.281  Sum_probs=40.9

Q ss_pred             CcEEE-EEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEEe
Q 048504          129 DRIVV-YLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHVG  199 (277)
Q Consensus       129 ~kVVL-YttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~IG  199 (277)
                      .+|+| |+++||      +.|.++...|...      .+.+..+|++.+++    |.+.++-  ..+|.+  |-+|+.++
T Consensus        20 kpvlv~F~a~wC------~~C~~~~p~~~~~~~~~~~~~~~~~vd~d~~~~----l~~~~~V--~~~Pt~~~~~~G~~v~   87 (107)
T d1dbya_          20 VPVLVDFWAPWC------GPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPN----VASEYGI--RSIPTIMVFKGGKKCE   87 (107)
T ss_dssp             SCEEEEEECTTC------HHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH----HHHHHTC--CSSCEEEEESSSSEEE
T ss_pred             CcEEEEEECCCC------CCccccChHHHHHHHhhcccceEEEEecccchh----HHHHhcc--cceEEEEEEECCeEEE
Confidence            34555 777775      7999888776642      56788899988754    5556654  788988  45775553

>d1xfla_ c.47.1.1 (A:) Thioredoxin {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.96  E-value=0.07  Score=39.48  Aligned_cols=53  Identities=15%  Similarity=0.207  Sum_probs=39.0

Q ss_pred             EEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEE
Q 048504          134 YLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHV  198 (277)
Q Consensus       134 YttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~I  198 (277)
                      |+++||      +.|+.+...|+.+     ++.|..+|++.++++    .+.+|-  ..+|.+  |-+|+.+
T Consensus        35 F~a~wC------~~C~~~~p~~~~l~~~~~~~~~~~vd~~~~~~l----~~~~~V--~~~Pt~~~~~~G~~v   94 (114)
T d1xfla_          35 FTASWC------GPCRFIAPFFADLAKKLPNVLFLKVDTDELKSV----ASDWAI--QAMPTFMFLKEGKIL   94 (114)
T ss_dssp             EECTTC------HHHHHHHHHHHHHHHHCSSEEEEEEETTTSHHH----HHHTTC--CSSSEEEEEETTEEE
T ss_pred             EEcCCC------CCccccccchhhhcccccccceeEEEeeeceee----ccccce--eeeEEEEEEECCEEE
Confidence            777775      7999988887752     577888999888654    444654  789977  5688765

>d1gh2a_ c.47.1.1 (A:) Thioredoxin-like protein, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin-like protein, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.50  E-value=0.089  Score=38.74  Aligned_cols=57  Identities=16%  Similarity=0.167  Sum_probs=41.4

Q ss_pred             EEE-EEecCCCCCCCChhHHHHHHHHHh----C-CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEEe
Q 048504          131 IVV-YLTSLRGIRRTFEDCYAVRMIFRG----F-RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHVG  199 (277)
Q Consensus       131 VVL-YttSlcgiR~Tc~~C~~Vk~iL~~----~-gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~IG  199 (277)
                      |+| |+++||      +.|+++...|+.    + ++.|..+|++.+++    +.+.+|-  ..+|.+  |-+|+.|+
T Consensus        24 vvv~F~a~wC------~~Ck~~~p~~~~la~~~~~~~f~~vd~d~~~~----l~~~~~v--~~~Pt~~~~~~G~~v~   88 (107)
T d1gh2a_          24 AVVKFTMRGC------GPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQG----TAATNNI--SATPTFQFFRNKVRID   88 (107)
T ss_dssp             EEEEEECSSC------HHHHHHHHHHHHHHHHCTTSEEEEEETTTSHH----HHHHTTC--CSSSEEEEEETTEEEE
T ss_pred             EEEEEECCCC------CCccccchhhhccccccccccccccccccchh----hhhhcCc--eeceEEEEEECCEEEE
Confidence            444 778876      799988888864    2 68899999998764    4455654  678876  66887654

>d1j9ba_ c.47.1.12 (A:) Arsenate reductase ArsC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: ArsC-like
domain: Arsenate reductase ArsC
species: Escherichia coli [TaxId: 562]

Probab=94.43  E-value=0.013  Score=46.18  Aligned_cols=43  Identities=12%  Similarity=-0.022  Sum_probs=34.7

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQC  179 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke  179 (277)
                      |+||..+-      |.-|++|.++|+.+||+|+.+|+..++--.++|.+
T Consensus         2 i~iY~~p~------Cs~srkal~~L~~~~i~~~~idy~k~pls~~eL~~   44 (138)
T d1j9ba_           2 ITIYHNPA------CGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVK   44 (138)
T ss_dssp             CEEECCTT------CHHHHHHHHHHHHTTCCCEEECTTTSCCCHHHHHH
T ss_pred             eEEEECCC------CHHHHHHHHHHHHCCCCeEEEeeccCCCCHHHHHH
Confidence            78999985      57999999999999999999999876433344433

>d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus tremula), thioredoxin H [TaxId: 113636]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: European aspen (Populus tremula), thioredoxin H [TaxId: 113636]

Probab=94.13  E-value=0.048  Score=40.28  Aligned_cols=65  Identities=23%  Similarity=0.249  Sum_probs=43.2

Q ss_pred             ccCCCCCCc-EEE-EEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--E
Q 048504          122 IRLPGTEDR-IVV-YLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--F  192 (277)
Q Consensus       122 i~~~~~~~k-VVL-YttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--F  192 (277)
                      +......++ |+| |+++||      +.|+.+...|+.+     ++.+..+|++.++++    .+.++-  ..+|.+  |
T Consensus        19 l~~~~~~~k~vvv~F~a~wC------~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~~l----~~~~~I--~~~Pt~~~~   86 (113)
T d1ti3a_          19 FEKGKGSQKLIVVDFTASWC------PPCKMIAPIFAELAKKFPNVTFLKVDVDELKAV----AEEWNV--EAMPTFIFL   86 (113)
T ss_dssp             HHHHTTSSSEEEEEEECSSC------HHHHHHHHHHHHHHHHCSSEEEEEEETTTCHHH----HHHHHC--SSTTEEEEE
T ss_pred             HHHHHcCCCEEEEEEEcCcc------ccchhhhhhhhhhhccCCCceEEeeeeeccccc----cccCee--cccceEEEE
Confidence            333334444 333 777775      7999888877752     567888999887654    444543  678887  5


Q ss_pred             eCCEEE
Q 048504          193 IRGKHV  198 (277)
Q Consensus       193 I~G~~I  198 (277)
                      -+|+.+
T Consensus        87 k~G~~v   92 (113)
T d1ti3a_          87 KDGKLV   92 (113)
T ss_dssp             ETTEEE
T ss_pred             ECCEEE
Confidence            688754

>d1fb6a_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea), thioredoxin M [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Spinach (Spinacia oleracea), thioredoxin M [TaxId: 3562]

Probab=94.13  E-value=0.22  Score=35.56  Aligned_cols=60  Identities=13%  Similarity=0.279  Sum_probs=41.2

Q ss_pred             CCcEEE-EEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEE
Q 048504          128 EDRIVV-YLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHV  198 (277)
Q Consensus       128 ~~kVVL-YttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~I  198 (277)
                      ..+|+| |+++||      +.|.++...|...      .+.+..+|++.++    +|.+.++-  ..+|.+  |-+|+.+
T Consensus        17 ~~~vlv~F~a~wC------~~C~~~~~~~~~l~~~~~~~~~~~~v~~d~~~----~l~~~~~V--~~~Pt~~~~~~G~~v   84 (104)
T d1fb6a_          17 EVPVMVDFWAPWC------GPCKLIAPVIDELAKEYSGKIAVYKLNTDEAP----GIATQYNI--RSIPTVLFFKNGERK   84 (104)
T ss_dssp             SSCEEEEEECTTC------HHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH----HHHHHTTC--CSSSEEEEEETTEEE
T ss_pred             CCcEEEEEEcCcc------CCccccCchhHHHHHhhcCccceeEEecccch----hhhhhcce--eeeeEEEEEEcCeEE
Confidence            344655 667775      7999988887753      3567788888775    45556664  788987  5688654


Q ss_pred             e
Q 048504          199 G  199 (277)
Q Consensus       199 G  199 (277)
                      +
T Consensus        85 ~   85 (104)
T d1fb6a_          85 E   85 (104)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d1m0ua2 c.47.1.5 (A:47-122) Class sigma GST {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class sigma GST
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.76  E-value=0.085  Score=37.07  Aligned_cols=69  Identities=13%  Similarity=0.150  Sum_probs=50.6

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      +...||.-+.+|      .+..+|.+|...||+|+++.++.+.  ..+.++...  ..++|.+.+||..|.....+.+.
T Consensus         2 ~s~kL~Yf~~~g------~~e~iRl~L~~~gi~yed~~~~~~~--~~~~~~~~p--~g~lP~l~~~g~~l~qS~aI~~Y   70 (76)
T d1m0ua2           2 HSYTLFYFNVKA------LAEPLRYLFAYGNQEYEDVRVTRDE--WPALKPTMP--MGQMPVLEVDGKRVHQSISMARF   70 (76)
T ss_dssp             CCEEEEEESSSG------GGHHHHHHHHHHTCCCEEEEECTTT--HHHHGGGSG--GGCSCEEEETTEEEECHHHHHHH
T ss_pred             ccEEEEecCCch------HHHHHHHHHHHcCCCCEEecCChhh--hhhhhccCc--CCCCcEEEECCcccccHHHHHHH
Confidence            345666666553      7899999999999999998887642  234444332  26799999999999887776653

>d1eeja1 c.47.1.9 (A:61-216) Disulfide bond isomerase, DsbC, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: DsbC/DsbG C-terminal domain-like
domain: Disulfide bond isomerase, DsbC, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.67  E-value=0.19  Score=38.98  Aligned_cols=23  Identities=22%  Similarity=0.317  Sum_probs=16.6

Q ss_pred             CCCcEEEe-CCEEEech---hHHHHHH
Q 048504          186 VTLPQVFI-RGKHVGNA---DVLKSMY  208 (277)
Q Consensus       186 ~tvPqVFI-~G~~IGG~---del~~L~  208 (277)
                      ...|.+|+ ||+.|-|+   ++|.++.
T Consensus       120 ~GTPt~~~~nG~~v~G~~~~e~l~~~i  146 (156)
T d1eeja1         120 SGTPAVVLSNGTLVPGYQPPKEMKEFL  146 (156)
T ss_dssp             CSSSEEECTTSCEEESCCCHHHHHHHH
T ss_pred             cCCCEEEEeCCeEecCCCCHHHHHHHH
Confidence            67899877 89999886   4444443

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=93.39  E-value=0.025  Score=40.46  Aligned_cols=49  Identities=27%  Similarity=0.624  Sum_probs=34.1

Q ss_pred             CCCCCCCccc------eEeCCCCCCcceeeeCCC--CcceeCCCCCcCcee---eCCCCC
Q 048504          227 FVCGSCGDVR------FVPCGNCSGSRKVFDEAD--GVPKRCLECNENGLI---RCPDCC  275 (277)
Q Consensus       227 ~~C~~CGg~r------fVpC~~C~GS~Kv~~~~~--~~~~rC~~CNEnGLv---rCp~C~  275 (277)
                      ..|..|.|.+      ...|+.|+|+-++.....  .....|+.|+-.|.+   +|+.|.
T Consensus        12 ~~C~~C~G~G~~~g~~~~~C~~C~G~G~v~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~   71 (79)
T d1exka_          12 EECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCH   71 (79)
T ss_dssp             EECGGGTTTSBCSSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECSSBCGGGT
T ss_pred             ccCCCCcCcccCCCccceeCCCccceeEEEEecccceeeEECcccCcceeECCCCCCCCC
Confidence            4677887654      466999999987654321  124579999988876   788874

>d1tw9a2 c.47.1.5 (A:1-77) Class sigma GST {Heligmosomoides polygyrus [TaxId: 6339]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class sigma GST
species: Heligmosomoides polygyrus [TaxId: 6339]

Probab=93.38  E-value=0.12  Score=36.34  Aligned_cols=67  Identities=12%  Similarity=0.137  Sum_probs=47.8

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      ..|+.-..+|      .|+.+|.+|...||+|+++.+..+  ...+.+....  ..++|.+.+||..|.....+.+.
T Consensus         4 ~kL~Yf~~~g------r~e~vR~~L~~~gi~ye~~~~~~~--~~~~~~~~~p--~g~lPvL~~~g~~i~qS~AI~~y   70 (77)
T d1tw9a2           4 YKLTYFNGRG------AGECARQVFALADQKYEDVRLTQE--TFVPLKATFP--FGQVPVLEVDGQQLAQSQAICRY   70 (77)
T ss_dssp             EEEEEESSSG------GGHHHHHHHHHTTCCCEEEEECHH--HHGGGGGGST--TSCSCEEEETTEEEECHHHHHHH
T ss_pred             eEEEECCCch------HHHHHHHHHHHcCCCceeeecccc--cchhhhhhcc--cCCCCEEEECCEEEEcHHHHHHH
Confidence            4454445554      899999999999999998887643  2233333332  36799999999998887766653

>d2ifqa1 c.47.1.1 (A:1-105) Thioredoxin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.37  E-value=0.2  Score=36.20  Aligned_cols=58  Identities=22%  Similarity=0.346  Sum_probs=41.6

Q ss_pred             cEEE-EEecCCCCCCCChhHHHHHHHHHhC-----CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEEe
Q 048504          130 RIVV-YLTSLRGIRRTFEDCYAVRMIFRGF-----RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHVG  199 (277)
Q Consensus       130 kVVL-YttSlcgiR~Tc~~C~~Vk~iL~~~-----gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~IG  199 (277)
                      .|+| |+++||      +.|+.+...|+..     ++.|..+|++.+++.    .+..+-  ..+|.+  |-||+.++
T Consensus        22 ~vvv~F~a~wC------~~C~~~~p~~~~l~~~~~~~~~~~vd~d~~~~~----~~~~~V--~~~Pt~~~~~~G~~v~   87 (105)
T d2ifqa1          22 LVVVDFSATWC------GPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDV----ASECEV--KCMPTFQFFKKGQKVG   87 (105)
T ss_dssp             CEEEEEECTTC------HHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHH----HHHTTC--CBSSEEEEEETTEEEE
T ss_pred             EEEEEEEcCCc------cchhhhhhhhhhhccccccceeeecccccCHhH----HHHcCc--eEEEEEEEEECCEEEE
Confidence            3554 777775      6999998888653     567889999888654    445554  789987  56887654

>d1iloa_ c.47.1.1 (A:) MTH985, a thioredoxin {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: MTH985, a thioredoxin
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.36  E-value=0.081  Score=38.23  Aligned_cols=55  Identities=15%  Similarity=0.245  Sum_probs=40.0

Q ss_pred             cEEEEEecCCCCCCCChhHH----HHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEE
Q 048504          130 RIVVYLTSLRGIRRTFEDCY----AVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHV  198 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~----~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~I  198 (277)
                      +|-|++ +.      |+.|.    .+++++..+|+..+..+|..    .+++.+ .|-  .++|.+.|||+.+
T Consensus         3 ~IkVlg-~g------C~~C~~~~~~v~~a~~e~gi~a~v~kv~d----~~ei~~-ygV--mstPalvIdg~vv   61 (77)
T d1iloa_           3 KIQIYG-TG------CANCQMLEKNAREAVKELGIDAEFEKIKE----MDQILE-AGL--TALPGLAVDGELK   61 (77)
T ss_dssp             EEEEEC-SS------SSTTHHHHHHHHHHHHHTTCCEEEEEECS----HHHHHH-HTC--SSSSCEEETTEEE
T ss_pred             EEEEeC-CC------CccHHHHHHHHHHHHHHcCCceEEEEeCC----HHHHHH-cCC--cCCCEEEECCEEE
Confidence            466774 33      67887    56666888999999888853    234444 554  8999999999865

>d1nw2a_ c.47.1.1 (A:) Thioredoxin {Alicyclobacillus acidocaldarius, formerly Bacillus acidocaldarius [TaxId: 405212]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Alicyclobacillus acidocaldarius, formerly Bacillus acidocaldarius [TaxId: 405212]

Probab=93.34  E-value=0.21  Score=35.81  Aligned_cols=57  Identities=21%  Similarity=0.409  Sum_probs=41.4

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEEe
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHVG  199 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~IG  199 (277)
                      ||.|+++||      +.|+.+...|+..      .+.+..+|++.++.+    .+.++-  ..+|.+  |-+|+.++
T Consensus        21 vv~F~a~wC------~~C~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~----~~~~~V--~~~Pt~~~~~~G~~~~   85 (105)
T d1nw2a_          21 LVDFWAAWC------GPCRMMAPVLEEFAEAHADKVTVAKLNVDENPET----TSQFGI--MSIPTLILFKGGEPVK   85 (105)
T ss_dssp             EEEEECTTC------HHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHH----HHHTTC--CBSSEEEEEETTEEEE
T ss_pred             EEEEECCCC------CCcccccchhhhhhhhcCCceEEEEEECCCCccc----HHHCCc--ceeeEEEEEECCEEEE
Confidence            455667665      7999988888753      588999999988654    455654  688987  56887553

>d1qgva_ c.47.1.8 (A:) spliceosomal protein U5-15Kd {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: spliceosomal protein U5-15Kd
domain: spliceosomal protein U5-15Kd
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.32  E-value=0.061  Score=41.98  Aligned_cols=57  Identities=14%  Similarity=0.235  Sum_probs=42.4

Q ss_pred             cEEE-EEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEE
Q 048504          130 RIVV-YLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHV  198 (277)
Q Consensus       130 kVVL-YttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~I  198 (277)
                      .|+| |+++||      +.|+++..+|+.+      .+.|..+|++.+++    |.+..+-  ..+|++  |.+|++|
T Consensus        24 ~vvv~F~a~wC------~~C~~~~p~l~~la~~~~~~v~~~~VDvd~~~~----la~~~~I--~~~PT~~~f~~g~~i   89 (137)
T d1qgva_          24 VVVIRFGHDWD------PTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPD----FNKMYEL--YDPCTVMFFFRNKHI   89 (137)
T ss_dssp             EEEEEEECTTS------HHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCT----TTTSSCS--CSSCEEEEEETTEEE
T ss_pred             EEEEEEECCCC------ccchhcChHHHHHHHHhhccceEEEeeccccch----hhhhcCe--eeEEEEEEEeCCcEE
Confidence            3444 777775      7999999999863      37888999988864    3444543  789987  7899987

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.32  E-value=0.02  Score=40.64  Aligned_cols=48  Identities=27%  Similarity=0.632  Sum_probs=31.3

Q ss_pred             CCCCCCccceE-----eCCCCCCcceeeeC--CCC----cceeCCCCCcCcee-----eCCCCC
Q 048504          228 VCGSCGDVRFV-----PCGNCSGSRKVFDE--ADG----VPKRCLECNENGLI-----RCPDCC  275 (277)
Q Consensus       228 ~C~~CGg~rfV-----pC~~C~GS~Kv~~~--~~~----~~~rC~~CNEnGLv-----rCp~C~  275 (277)
                      .|..|.|.+..     .|+.|+|+-++...  ...    ....|+.|+-.|.+     +|+.|.
T Consensus         4 ~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~~~~C~~C~   67 (74)
T d1nlta3           4 LCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCN   67 (74)
T ss_dssp             ECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCTTSBCSSST
T ss_pred             CCcCCcccccCCCCCCCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCCCCCCCCCC
Confidence            57777766643     48888888665421  111    24568888888865     588884

>d1woua_ c.47.1.16 (A:) Putative 42-9-9 protein (thioredoxin containing protein Txnl5) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Txnl5-like
domain: Putative 42-9-9 protein (thioredoxin containing protein Txnl5)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.31  E-value=0.09  Score=39.60  Aligned_cols=65  Identities=14%  Similarity=0.191  Sum_probs=43.9

Q ss_pred             cEEEEEec--------CCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHH---HHHHHhCCCCCCCcEEE
Q 048504          130 RIVVYLTS--------LRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKK---ELQCVFGGKNVTLPQVF  192 (277)
Q Consensus       130 kVVLYttS--------lcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~re---ELke~lG~~~~tvPqVF  192 (277)
                      .|+||+++        ||      +.|+++.-.|+.+      ++.|..+||...+++.+   .|.+..+-  ..+|.+.
T Consensus        23 ~v~v~F~a~~~~~g~sWC------~pCk~~~P~~~~l~~~~~~~~~~~~vdv~~~~~~~d~~~~l~~~~~V--~~iPT~i   94 (119)
T d1woua_          23 TIFAYFTGSKDAGGKSWC------PDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKV--TAVPTLL   94 (119)
T ss_dssp             EEEEEEECCBCTTCCBSC------HHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCC--CSSSEEE
T ss_pred             EEEEEEEecCCCCCCCCC------hhHHHHHHHHHHHHHhcCCceEEEEEECCCCcccchhhhhHHHhCCe--EEEEEEE
Confidence            57777764        65      7999999888652      36788899876554433   35566664  7899974


Q ss_pred             --eCCEEEechh
Q 048504          193 --IRGKHVGNAD  202 (277)
Q Consensus       193 --I~G~~IGG~d  202 (277)
                        -+|+-+.+.+
T Consensus        95 ~~~~g~~l~~~~  106 (119)
T d1woua_          95 KYGTPQKLVESE  106 (119)
T ss_dssp             ETTSSCEEEGGG
T ss_pred             EEECCeEEeeee
Confidence              3666665543

>d1zmaa1 c.47.1.1 (A:1-115) Bacterocin transport accessory protein Bta {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Bacterocin transport accessory protein Bta
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=93.27  E-value=0.13  Score=37.89  Aligned_cols=64  Identities=11%  Similarity=0.166  Sum_probs=40.3

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHHHHHHHh----CCCeEEEEECCC--CHHHHHHHHHHhCCCCCCCcEEEe--CCEEE
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRG----FRVWVDERDVSM--DSAYKKELQCVFGGKNVTLPQVFI--RGKHV  198 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~----~gV~y~ErDVs~--d~~~reELke~lG~~~~tvPqVFI--~G~~I  198 (277)
                      ...|+||...     .+|++|+++...|..    ++..+..+|+..  +......+.+..|-  ..+|.+++  +|+.+
T Consensus        26 ~~~~~v~f~~-----~~C~~C~~~~p~l~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~V--~~~PTli~~~~gk~~   97 (115)
T d1zmaa1          26 KETATFFIGR-----KTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGI--PTVPGFVHITDGQIN   97 (115)
T ss_dssp             TCCEEEEEEC-----TTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTC--CSSCEEEEEETTEEE
T ss_pred             CCCEEEEEcC-----CCCccHHHHHHHHHHHHHHhhhhhhhheeeccccccccccccccccc--ccccEEEEEECCEEE
Confidence            4456666653     357899988877754    455555666654  33344456666664  78999843  66644

>d1tu7a2 c.47.1.5 (A:1-77) Class pi GST {Onchocerca volvulus [TaxId: 6282]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class pi GST
species: Onchocerca volvulus [TaxId: 6282]

Probab=93.22  E-value=0.063  Score=37.73  Aligned_cols=67  Identities=10%  Similarity=0.140  Sum_probs=48.6

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSM  207 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~L  207 (277)
                      ..||.-+.+      ..|+.+|.+|...||+|+++.+..+.  ..+++....  ..++|.+.+||..|.....+.+.
T Consensus         3 ~kL~Yf~~~------g~~e~iRl~L~~~gi~~e~~~~~~~~--~~~~~~~~p--~g~lPvL~~~~~~l~qS~AI~~Y   69 (77)
T d1tu7a2           3 YKLTYFSIR------GLAEPIRLFLVDQDIKFIDDRIAKDD--FSSIKSQFQ--FGQLPCLYDGDQQIVQSGAILRH   69 (77)
T ss_dssp             EEEEEESSS------GGGHHHHHHHHHTTCCCEEEEECGGG--STTTGGGST--TSCSCEEEETTEEEESHHHHHHH
T ss_pred             eEEEecCCc------HHHHHHHHHHHHcCCCceeeeccccc--chhhcccCC--CCCCCEEEECCEEEEcHHHHHHH
Confidence            345555554      48999999999999999988876432  223333333  26899999999999988777664

>d1fhea2 c.47.1.5 (A:1-80) Class alpha GST {Fasciola hepatica [TaxId: 6192]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class alpha GST
species: Fasciola hepatica [TaxId: 6192]

Probab=93.18  E-value=0.079  Score=37.26  Aligned_cols=69  Identities=16%  Similarity=0.098  Sum_probs=44.9

Q ss_pred             EEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCH--HHHHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          131 IVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDS--AYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       131 VVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~--~~reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      +.||.=..+|      .++.+|.+|...||+|+++.++.+.  ++.++ +........++|.+-.+|..|.....+.+
T Consensus         2 ~~L~Y~~~rg------rae~iRl~L~~~gv~ye~~~~~~~~~~~~~~~-~~~~~~p~~~~P~l~~~g~~l~qS~AI~~   72 (80)
T d1fhea2           2 AKLGYWKLRG------LAQPVRLFLEYLGEEYEEHLYGRDDREKWMSE-KFNMGLDLPNLPYYIDDKCKLTQSVAIMR   72 (80)
T ss_dssp             CEEEEESSCT------TTHHHHHHHHHTTCCCEEEEECSTTSHHHHTT-TTTSCCSSCCSSEEECSSCEEESTTHHHH
T ss_pred             eEEEEcCCch------HHHHHHHHHHHcCCCCEEEEeccccchhcchh-hhhccCCCcceeeeecCCeEEeCHHHHHH
Confidence            4553334554      7899999999999999999887652  22111 11112224679999888887766555544

>d2trxa_ c.47.1.1 (A:) Thioredoxin {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Escherichia coli [TaxId: 562]

Probab=92.40  E-value=0.47  Score=33.87  Aligned_cols=58  Identities=16%  Similarity=0.348  Sum_probs=38.9

Q ss_pred             CcEEE-EEecCCCCCCCChhHHHHHHHHHh----C--CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEE
Q 048504          129 DRIVV-YLTSLRGIRRTFEDCYAVRMIFRG----F--RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHV  198 (277)
Q Consensus       129 ~kVVL-YttSlcgiR~Tc~~C~~Vk~iL~~----~--gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~I  198 (277)
                      ..|+| |+++||      +.|+.+...+..    +  .+.+..+|++.++.    +.+.+|-  ..+|.+  |.+|+.+
T Consensus        21 ~~v~v~F~a~wC------~~C~~~~~~~~~~a~~~~~~~~~~~vd~d~~~~----l~~~~~v--~~~PT~~~~~~G~~v   87 (108)
T d2trxa_          21 GAILVDFWAEWC------GPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG----TAPKYGI--RGIPTLLLFKNGEVA   87 (108)
T ss_dssp             SEEEEEEECTTC------HHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTT----HHHHTTC--CSSSEEEEEETTEEE
T ss_pred             CcEEEEEECCCC------CCccccCcHHHHHHHHhhcceeeeeccccchhh----HHHHhCC--CcEEEEEEEECCEEE
Confidence            34555 667765      799987777754    2  45577888887653    5556665  788987  4588744

>d2c4ja2 c.47.1.5 (A:2-85) Class mu GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class mu GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.29  E-value=0.094  Score=36.87  Aligned_cols=72  Identities=14%  Similarity=0.200  Sum_probs=48.3

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHH---HHHHHH-Hh--CCCCCCCcEEEeCCEEEechhH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAY---KKELQC-VF--GGKNVTLPQVFIRGKHVGNADV  203 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~---reELke-~l--G~~~~tvPqVFI~G~~IGG~de  203 (277)
                      +++||.=..+|      .++.+|.+|...||+|+.+.++.+...   ..+... ..  ......+|.+-.+|..|.....
T Consensus         1 P~~L~Y~~~~g------~~~~vR~~L~~~gi~ye~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lP~L~~~g~~l~eS~A   74 (84)
T d2c4ja2           1 PMTLGYWNIRG------LAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLPYLIDGTHKITQSNA   74 (84)
T ss_dssp             CEEEEEESSSG------GGHHHHHHHHHTTCCEEEEEECCCCTTTTCCHHHHTTTTSSCCSSCCSSEEEETTEEEESHHH
T ss_pred             CEEEEECCCch------hhHHHHHHHHHcCCCceEEEEccccccccchHHHhhhhhhccCCCCCCCEEEECCEEEecHHH
Confidence            35665555654      889999999999999999888765321   111111 11  1123679999999998887666


Q ss_pred             HHHH
Q 048504          204 LKSM  207 (277)
Q Consensus       204 l~~L  207 (277)
                      +.+.
T Consensus        75 Il~Y   78 (84)
T d2c4ja2          75 ILRY   78 (84)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6553

>d1f9ma_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea), thioredoxin F [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Spinach (Spinacia oleracea), thioredoxin F [TaxId: 3562]

Probab=91.77  E-value=0.74  Score=33.64  Aligned_cols=59  Identities=19%  Similarity=0.224  Sum_probs=40.5

Q ss_pred             CcEEE-EEecCCCCCCCChhHHHHHHHHHh-----CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE--eCCEEE
Q 048504          129 DRIVV-YLTSLRGIRRTFEDCYAVRMIFRG-----FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF--IRGKHV  198 (277)
Q Consensus       129 ~kVVL-YttSlcgiR~Tc~~C~~Vk~iL~~-----~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF--I~G~~I  198 (277)
                      ..|+| |+++|      |+.|+.+...|+.     .++.+..+|++.+.   .+|.+.+|-  ..+|.+.  =+|+.|
T Consensus        26 k~vvv~f~a~w------C~~C~~~~p~~~~l~~~~~~v~~~~vd~~~~~---~~l~~~~~V--~~~Pt~~~~k~G~~v   92 (112)
T d1f9ma_          26 KPVVLDMFTQW------CGPCKAMAPKYEKLAEEYLDVIFLKLDCNQEN---KTLAKELGI--RVVPTFKILKENSVV   92 (112)
T ss_dssp             SCEEEEEECTT------CHHHHHHHHHHHHHHHHCTTSEEEEEECSSTT---HHHHHHHCC--SSSSEEEEEETTEEE
T ss_pred             CEEEEEEEcCC------CcchHHHHHHHhhhccccccceeecccccccc---hhhHhheee--ccCCEEEEEECCEEE
Confidence            34555 56666      5799999888875     46778889986421   345666765  6889883  388754

>d1duga2 c.47.1.5 (A:1-80) Class alpha GST {Schistosoma japonicum [TaxId: 6182]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class alpha GST
species: Schistosoma japonicum [TaxId: 6182]

Probab=91.38  E-value=0.25  Score=34.54  Aligned_cols=70  Identities=13%  Similarity=0.121  Sum_probs=47.6

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHH-HHHHHHHhCCCCCCCcEEEeCCEEEechhHHHH
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAY-KKELQCVFGGKNVTLPQVFIRGKHVGNADVLKS  206 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~-reELke~lG~~~~tvPqVFI~G~~IGG~del~~  206 (277)
                      +|+.|.. .+|      .++.+|.+|.-.||+|+++.++.+... ....+.........+|.+..||..|.....+.+
T Consensus         2 P~L~Y~~-~rg------rae~vRl~L~~~gi~ye~~~~~~~~~~~~~~~~~~~~~p~~~lP~l~d~g~~l~qS~AI~r   72 (80)
T d1duga2           2 PILGYWK-IKG------LVQPTRLLLEYLEEKYEEHLYERDEGDKWRNKKFELGLEFPNLPYYIDGDVKLTQSMAIIR   72 (80)
T ss_dssp             CEEEEES-SSG------GGHHHHHHHHHHTCCCEEEEECTTCHHHHHHHTTSSCCSSCCSSEEECSSCEEESHHHHHH
T ss_pred             CEEEEcC-Cch------hhHHHHHHHHHcCCCceEEEEecccccccchhhhhccCCCcccceeccCCeeehhHHHHHH
Confidence            4667764 443      889999999999999999888765322 121111112223689999999888877666655

>d1xg8a_ c.47.1.17 (A:) Hypothetical protein SA0798 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: YuzD-like
domain: Hypothetical protein SA0798
species: Staphylococcus aureus [TaxId: 1280]

Probab=91.35  E-value=0.4  Score=36.71  Aligned_cols=76  Identities=12%  Similarity=0.140  Sum_probs=49.1

Q ss_pred             CCcEEEEEecCCCCCCCChhHH------HHHHHHHh--------CCCeEEEEECCCCHH----HHHHHHHHhCCCCCCCc
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCY------AVRMIFRG--------FRVWVDERDVSMDSA----YKKELQCVFGGKNVTLP  189 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~------~Vk~iL~~--------~gV~y~ErDVs~d~~----~reELke~lG~~~~tvP  189 (277)
                      ...|+||....     .|+-|.      ..-.+|+.        +.+.|..+||..+++    ..+++.++.-...--.|
T Consensus         7 ~v~i~VYGA~~-----iCASCV~aPSSkeTyEWLqaal~RKyp~~~f~~~YiDi~~~~~~~~~~~~~~ae~I~ede~FYP   81 (111)
T d1xg8a_           7 SNAVVVYGADV-----ICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQDELFYP   81 (111)
T ss_dssp             CEEEEEEECSS-----CCGGGSSSCCHHHHHHHHHHHHHHHCTTSCEEEEEEETTTC---CCHHHHHHHHHHHTTSSCSS
T ss_pred             eeEEEEEcccc-----cchhhcCCCCchhHHHHHHHHHhCcCCCCceEEEEEeccCCcccccHHHHHHHHHHhhccceee
Confidence            44699999873     677774      66666664        356688999976553    33445444432236689


Q ss_pred             EEEeCCEEEe-chhHHHHHH
Q 048504          190 QVFIRGKHVG-NADVLKSMY  208 (277)
Q Consensus       190 qVFI~G~~IG-G~del~~L~  208 (277)
                      .|.|+|+.|| |.-.|+...
T Consensus        82 lV~i~~eiVaEGnp~LK~I~  101 (111)
T d1xg8a_          82 LITMNDEYVADGYIQTKQIT  101 (111)
T ss_dssp             EEEETTEEEEESSCCHHHHH
T ss_pred             EEEECCEEeecCCccHHHHH
Confidence            9999999997 444455444

>d1pmta2 c.47.1.5 (A:1-80) Class beta GST {Proteus mirabilis [TaxId: 584]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class beta GST
species: Proteus mirabilis [TaxId: 584]

Probab=90.65  E-value=0.082  Score=37.16  Aligned_cols=66  Identities=9%  Similarity=0.133  Sum_probs=42.4

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCC--HHHH-HHHHHHhCCCCCCCcEEEeC-CEEEechhHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMD--SAYK-KELQCVFGGKNVTLPQVFIR-GKHVGNADVLKS  206 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d--~~~r-eELke~lG~~~~tvPqVFI~-G~~IGG~del~~  206 (277)
                      -||+....       .+.+|+.+|+.+||+|+.+.|+..  ...+ .++.++...  .++|.+.++ |..|-....+.+
T Consensus         2 kLY~~p~s-------~s~~vr~~L~e~gi~~e~~~v~~~~~~~~~~~~~~~~nP~--g~vP~L~~~~g~~l~ES~aI~~   71 (80)
T d1pmta2           2 KLYYTPGS-------CSLSPHIVLRETGLDFSIERIDLRTKKTESGKDFLAINPK--GQVPVLQLDNGDILTEGVAIVQ   71 (80)
T ss_dssp             EEEECTTS-------TTHHHHHHHHHTTCCCEEEEEETTTTEETTSCBGGGTCTT--CCSCEEECTTSCEEESHHHHHH
T ss_pred             EEEeCCCC-------hHHHHHHHHHHhCCCCEEEEEecCCCcccCCHHHHHhccc--ccCCceecCCCcEEeCHHHHHH
Confidence            36876642       468999999999999986665532  2222 345555433  689999875 566655444443

>d1n2aa2 c.47.1.5 (A:1-80) Class beta GST {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class beta GST
species: Escherichia coli [TaxId: 562]

Probab=90.58  E-value=0.053  Score=38.15  Aligned_cols=68  Identities=9%  Similarity=0.068  Sum_probs=44.7

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCC--CH-HHHHHHHHHhCCCCCCCcEEEe-CCEEEechhHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSM--DS-AYKKELQCVFGGKNVTLPQVFI-RGKHVGNADVLKSM  207 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~--d~-~~reELke~lG~~~~tvPqVFI-~G~~IGG~del~~L  207 (277)
                      .||.....       .+.+++.+|+.+|++|+.+.|..  .. ...+++.++...  ..+|.+.. ||..|-....+.+.
T Consensus         2 kLY~~p~s-------~s~~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~~nP~--g~vP~L~~~dg~~l~ES~aI~~y   72 (80)
T d1n2aa2           2 KLFYKPGA-------CSLASHITLRESGKDFTLVSVDLMKKRLENGDDYFAVNPK--GQVPALLLDDGTLLTEGVAIMQY   72 (80)
T ss_dssp             EEEECTTS-------TTHHHHHHHHHTTCCCEEEEEETTTTEETTCCBGGGTCTT--CCSCEEECTTSCEEESHHHHHHH
T ss_pred             EEEeCCCc-------cHHHHHHHHHHhCCCCEEEEEcCCCCcccCCHHHHHHhcc--cceeeEEecCCCEEcCHHHHHHH
Confidence            36776642       25799999999999988766543  21 122345555433  68999987 55777776666654


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        73 L   73 (80)
T d1n2aa2          73 L   73 (80)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1a8ya1 c.47.1.3 (A:3-126) Calsequestrin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Calsequestrin
domain: Calsequestrin
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=90.07  E-value=0.17  Score=37.63  Aligned_cols=63  Identities=13%  Similarity=0.092  Sum_probs=41.6

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHH-------hCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE--EeCCEEE
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFR-------GFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV--FIRGKHV  198 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~-------~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV--FI~G~~I  198 (277)
                      -+|+|+.+||+-+...+.|..+...++       ..+|.+-.+|...+..    |.+..+-  ..+|.|  |.+|+.+
T Consensus        31 ~~V~FyapwC~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~a~Vd~~~~~~----l~~~~~I--~~yPTi~~f~~g~~~  102 (124)
T d1a8ya1          31 LALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAA----VAKKLGL--TEEDSIYVFKEDEVI  102 (124)
T ss_dssp             EEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEETTTSHH----HHHTTTC--CSTTCEEEEESSSEE
T ss_pred             EEEEEECCCccchhhhhHHHHHHHHHHHHHHHhccCCeEEEEEEeecccc----hhhcccc--ccCCcEEEeccCccE
Confidence            388999999973222334655555554       4568899999988754    4555553  567776  5677655

>d1f2ea2 c.47.1.5 (A:1-80) Class beta GST {Sphingomonas paucimobilis [TaxId: 13689]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class beta GST
species: Sphingomonas paucimobilis [TaxId: 13689]

Probab=90.02  E-value=0.12  Score=36.37  Aligned_cols=68  Identities=9%  Similarity=0.139  Sum_probs=45.9

Q ss_pred             EEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCC--CHH-HHHHHHHHhCCCCCCCcEEEeC-CEEEechhHHHHH
Q 048504          132 VVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSM--DSA-YKKELQCVFGGKNVTLPQVFIR-GKHVGNADVLKSM  207 (277)
Q Consensus       132 VLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~--d~~-~reELke~lG~~~~tvPqVFI~-G~~IGG~del~~L  207 (277)
                      .||.++.     +|  ..+++.+|+.+||+|+.+.|..  ... ..+++.++...  .++|.+-++ |..|.....+.+.
T Consensus         2 kLY~~p~-----s~--s~~v~~~L~e~gi~~e~~~v~~~~~~~~~~~~~~~~nP~--g~vP~L~~d~g~~l~ES~aI~~y   72 (80)
T d1f2ea2           2 KLFISPG-----AC--SLAPHIALRETGADFEAVKVDLAVRKTEAGEDFLTVNPS--GKVPALTLDSGETLTENPAILLY   72 (80)
T ss_dssp             EEEECTT-----ST--THHHHHHHHHHTCCCEEEEEETTTTEETTSCBHHHHCTT--CCSCEEECTTSCEEESHHHHHHH
T ss_pred             EEecCCC-----ch--HHHHHHHHHHcCCCCEEEEEecCCCcccCCHHHHHHhhc--cccceEEECCCeEEecHHHHHHH
Confidence            3687653     22  4799999999999988766543  222 23566777644  689999874 6777776666654


Q ss_pred             H
Q 048504          208 Y  208 (277)
Q Consensus       208 ~  208 (277)
                      .
T Consensus        73 L   73 (80)
T d1f2ea2          73 I   73 (80)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1t3ba1 c.47.1.9 (A:61-210) Disulfide bond isomerase, DsbC, C-terminal domain {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: DsbC/DsbG C-terminal domain-like
domain: Disulfide bond isomerase, DsbC, C-terminal domain
species: Haemophilus influenzae [TaxId: 727]

Probab=89.83  E-value=0.52  Score=36.24  Aligned_cols=26  Identities=19%  Similarity=0.231  Sum_probs=18.3

Q ss_pred             HHHhCCCCCCCcEEEe-CCEEEechhHHH
Q 048504          178 QCVFGGKNVTLPQVFI-RGKHVGNADVLK  205 (277)
Q Consensus       178 ke~lG~~~~tvPqVFI-~G~~IGG~del~  205 (277)
                      .+.+|-  ...|.+|+ ||+.|-|+-...
T Consensus       114 a~~lGv--~GTPt~~~~nG~~i~G~~~~~  140 (150)
T d1t3ba1         114 GIQFGV--RGTPSIVTSTGELIGGYLKPA  140 (150)
T ss_dssp             HHHHTC--CSSCEEECTTSCCCCSCCCHH
T ss_pred             HHhcCc--CCCCEEEEcCCcEecCCCCHH
Confidence            334454  78999877 899999875443

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=89.58  E-value=0.12  Score=36.64  Aligned_cols=38  Identities=24%  Similarity=0.700  Sum_probs=31.2

Q ss_pred             CCCCCCCccceE-----------eCCCCCCcceeeeCCCCcceeCCCCCcCceee
Q 048504          227 FVCGSCGDVRFV-----------PCGNCSGSRKVFDEADGVPKRCLECNENGLIR  270 (277)
Q Consensus       227 ~~C~~CGg~rfV-----------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLvr  270 (277)
                      ..|..|.|.+.|           +|+.|+|+-+++.      .+|..|+-+|.|+
T Consensus        29 ~~C~~C~G~G~v~~~~g~~~~~~~C~~C~G~G~~i~------~~C~~C~G~G~v~   77 (79)
T d1exka_          29 QTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIK------DPCNKCHGHGRVE   77 (79)
T ss_dssp             EECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECS------SBCGGGTTSSEEE
T ss_pred             eeCCCccceeEEEEecccceeeEECcccCcceeECC------CCCCCCCCceEee
Confidence            569999988754           4999999988864      2699999999875

>d2b5ea4 c.47.1.2 (A:23-141) Protein disulfide isomerase, PDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: PDI-like
domain: Protein disulfide isomerase, PDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.47  E-value=0.77  Score=33.55  Aligned_cols=55  Identities=9%  Similarity=0.140  Sum_probs=38.7

Q ss_pred             cEEEEEecCCCCCCCChhHHHHHHHHHh-------CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEe--CCE
Q 048504          130 RIVVYLTSLRGIRRTFEDCYAVRMIFRG-------FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFI--RGK  196 (277)
Q Consensus       130 kVVLYttSlcgiR~Tc~~C~~Vk~iL~~-------~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI--~G~  196 (277)
                      -+|.|+++||      +.|+.+...|+.       .+|.+-.+|++.+.    +|.+.++-  ..+|.|++  +|+
T Consensus        30 ~lV~fya~wC------~~C~~~~~~~~~la~~~~~~~v~~~~vd~~~~~----~l~~~~~v--~~~Pti~~f~~g~   93 (119)
T d2b5ea4          30 VLAEFFAPWC------GHCKNMAPEYVKAAETLVEKNITLAQIDCTENQ----DLCMEHNI--PGFPSLKIFKNSD   93 (119)
T ss_dssp             EEEEEECTTC------HHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCH----HHHHHTTC--CSSSEEEEEETTC
T ss_pred             EEEEEECCcc------CcccccchhhhhhhhhhcccceeeeeeeccchH----HHHHHhcc--ccCCeEEEEECCE
Confidence            3566667765      799987777654       25888899998764    45556654  78999965  663

>d2fnoa2 c.47.1.5 (A:1-87) Hypothetical protein AGR_pAT_752p/Atu5508 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Hypothetical protein AGR pAT 752p/Atu5508
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=89.31  E-value=0.056  Score=38.89  Aligned_cols=74  Identities=12%  Similarity=-0.031  Sum_probs=46.4

Q ss_pred             CCCCcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeCC--EEEechhH
Q 048504          126 GTEDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRG--KHVGNADV  203 (277)
Q Consensus       126 ~~~~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~G--~~IGG~de  203 (277)
                      .++..++||.-..++      .++.+|.+|...||+|+++.++.....++.-..........+|.+.+++  ..|.-...
T Consensus         3 ~~M~~~~L~Y~~~~g------~~e~vRl~L~~~g~~ye~~~~~~~~~~~~~~~~~~~~p~~~~P~l~~~~g~~~l~qS~A   76 (87)
T d2fnoa2           3 DGMNTFDLYYWPVPF------RGQLIRGILAHCGCSWDEHDVDAIEGLMDCGAEKQPVAFMGPPVLIDRERNFAISQMPA   76 (87)
T ss_dssp             TSCBSEEEECCSSSS------TTHHHHHHHHHTTCCEECCCHHHHHHHHHSCGGGSSSCCSSSCEEEETTTTEEEESHHH
T ss_pred             CCCCCeEEEECCCCc------chHHHHHHHHHHhCcceeeccchhHHHHHhhcccccCCCCCCCEEEecCCCeeeehHHH
Confidence            346778999888764      7899999999999999987665322221111111111236799998853  34554444


Q ss_pred             HH
Q 048504          204 LK  205 (277)
Q Consensus       204 l~  205 (277)
                      +.
T Consensus        77 I~   78 (87)
T d2fnoa2          77 IA   78 (87)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>d1xwaa_ c.47.1.1 (A:) Thioredoxin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.19  E-value=0.94  Score=32.56  Aligned_cols=53  Identities=15%  Similarity=0.222  Sum_probs=37.0

Q ss_pred             EEecCCCCCCCChhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE--eCCEEE
Q 048504          134 YLTSLRGIRRTFEDCYAVRMIFRGF------RVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF--IRGKHV  198 (277)
Q Consensus       134 YttSlcgiR~Tc~~C~~Vk~iL~~~------gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF--I~G~~I  198 (277)
                      |.++||      +.|+++...|+.+      .+.+..+|++.+++    +.+.++-  ..+|.++  -+|+.+
T Consensus        32 f~a~wC------~~C~~~~p~~~~l~~~~~~~~~~~~i~~d~~~~----l~~~~~V--~~~Pt~~~~~~G~~v   92 (111)
T d1xwaa_          32 FFATWC------GPCKMISPKLVELSTQFADNVVVLKVDVDECED----IAMEYNI--SSMPTFVFLKNGVKV   92 (111)
T ss_dssp             EECTTC------HHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHH----HHHHTTC--CSSSEEEEEETTEEE
T ss_pred             EECCcc------cCccccchhHHHHhhhcccceEEEEEEeecCcc----hhhcCCC--ccccEEEEEECCEEE
Confidence            888886      6999888888653      25667788877654    4556654  6788874  477544

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.49  E-value=0.17  Score=35.46  Aligned_cols=40  Identities=28%  Similarity=0.671  Sum_probs=31.6

Q ss_pred             CCCCCCCccceE---------------eCCCCCCcceeeeCCCCcceeCCCCCcCceee
Q 048504          227 FVCGSCGDVRFV---------------PCGNCSGSRKVFDEADGVPKRCLECNENGLIR  270 (277)
Q Consensus       227 ~~C~~CGg~rfV---------------pC~~C~GS~Kv~~~~~~~~~rC~~CNEnGLvr  270 (277)
                      ..|..|.|.+++               +|+.|+|.-+++..+    -+|..|+-.|.|+
T Consensus        19 ~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~~----~~C~~C~G~g~v~   73 (74)
T d1nlta3          19 KKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPK----DRCKSCNGKKVEN   73 (74)
T ss_dssp             CCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCTT----SBCSSSTTSCEEE
T ss_pred             CCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCCC----CCCCCCCCeeEeC
Confidence            579999987643               499999998777632    4799999999875

>d1nhya2 c.47.1.5 (A:1-75) GST-like domain of elongation factor 1-gamma {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: GST-like domain of elongation factor 1-gamma
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.96  E-value=0.95  Score=31.49  Aligned_cols=66  Identities=11%  Similarity=0.079  Sum_probs=48.7

Q ss_pred             CcEEEEEecCCCCCCCChhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEEeC-CEEEechhHHHH
Q 048504          129 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIR-GKHVGNADVLKS  206 (277)
Q Consensus       129 ~kVVLYttSlcgiR~Tc~~C~~Vk~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVFI~-G~~IGG~del~~  206 (277)
                      .+.+||+...       .....++.+++..+++|+.++...   ..+++.+....  .++|.+-.+ |..|-....+.+
T Consensus         2 s~~tLY~~~~-------~rs~~~~~~l~~~~~d~~~~~~~~---~~~~~~~~nP~--gkVP~L~~~~g~~l~ES~aI~~   68 (75)
T d1nhya2           2 SQGTLYANFR-------IRTWVPRGLVKALKLDVKVVTPDA---AAEQFARDFPL--KKVPAFVGPKGYKLTEAMAINY   68 (75)
T ss_dssp             TTCEEECCSS-------HHHHHHHHHHHHHTCCCEEECGGG---CHHHHHHHCTT--CCSSEEECGGGCEEESHHHHHH
T ss_pred             CCeEEecCCC-------chHHHHHHHHHhcCccccccCccc---CCHHHHHhCcC--CCCCeEEeCCeeEecCHHHHHH
Confidence            4578898653       477899999999999998877543   34577777654  689999754 777777666554

>d2fwha1 c.47.1.1 (A:428-544) Thiol:disulfide interchange protein DsbD, C-terminal domain (DsbD-gamma) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thiol:disulfide interchange protein DsbD, C-terminal domain (DsbD-gamma)
species: Escherichia coli [TaxId: 562]

Probab=83.73  E-value=1.9  Score=30.75  Aligned_cols=57  Identities=11%  Similarity=0.171  Sum_probs=38.7

Q ss_pred             cEEE-EEecCCCCCCCChhHHHHHHHH-------Hh-CCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEEE-eC
Q 048504          130 RIVV-YLTSLRGIRRTFEDCYAVRMIF-------RG-FRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVF-IR  194 (277)
Q Consensus       130 kVVL-YttSlcgiR~Tc~~C~~Vk~iL-------~~-~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqVF-I~  194 (277)
                      .|+| |..+|      |++|+.....+       +. ..+.+..+|+..+...-.+|.+..+-  ..+|.++ ++
T Consensus        24 ~vlv~F~a~w------C~~C~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v--~~~Pt~~~~~   90 (117)
T d2fwha1          24 PVMLDLYADW------CVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNV--LGLPTILFFD   90 (117)
T ss_dssp             CEEEEEECTT------CHHHHHHHHHTTTSHHHHHHTTTSEEEEEECTTCCHHHHHHHHHTTC--CSSSEEEEEC
T ss_pred             eEEEEEeccc------CCcccccchhHHhHHHHHHhccceEEEecccccchhHHHHHHhhheh--hhceEEEEEe
Confidence            4555 55555      57999876544       22 24667788988877777778888765  6788874 54

>d2dlxa1 c.47.1.24 (A:1-147) UBX domain-containing protein 7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: UAS domain
domain: UBX domain-containing protein 7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.62  E-value=2.5  Score=32.46  Aligned_cols=81  Identities=10%  Similarity=0.125  Sum_probs=46.0

Q ss_pred             CCcEEEEEecCCCCCCCChhHHHH----------HHHHHhCCCeEEEEECCCCHHHHHHHHHHhCCCCCCCcEE-EeC--
Q 048504          128 EDRIVVYLTSLRGIRRTFEDCYAV----------RMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQV-FIR--  194 (277)
Q Consensus       128 ~~kVVLYttSlcgiR~Tc~~C~~V----------k~iL~~~gV~y~ErDVs~d~~~reELke~lG~~~~tvPqV-FI~--  194 (277)
                      ...|+||..+.     .|++|++.          +++++.+=| +..+|++.  .--.++.+..+.  ..+|.| ||+  
T Consensus        42 ~K~llV~~~~~-----~C~~C~~m~~~v~~d~~V~~~l~~~fV-~~~v~~~~--~e~~~~~~~y~v--~~~Pti~~idp~  111 (147)
T d2dlxa1          42 NKWLMINIQNV-----QDFACQCLNRDVWSNEAVKNIIREHFI-FWQVYHDS--EEGQRYIQFYKL--GDFPYVSILDPR  111 (147)
T ss_dssp             TCEEEEEEECS-----CTTTHHHHHHHTTTCHHHHHHHHHTEE-EEEEESSS--HHHHHHHHHHTC--CSSSEEEEECTT
T ss_pred             CCcEEEEEecC-----CCCchHHHHHhccCCHHHHHHHhhhee-Eeeecccc--hhhhhhhhheec--CceeEEEEEeCC
Confidence            34677887753     47899754          445555422 23455543  334556777765  689977 664  


Q ss_pred             -CEE---EechhHHHHHHhhccHHHHhcCCC
Q 048504          195 -GKH---VGNADVLKSMYETGELARVLDGFP  221 (277)
Q Consensus       195 -G~~---IGG~del~~L~EsGeL~klL~~~~  221 (277)
                       |+.   .|+. +..++.  ..|+++|..-+
T Consensus       112 ~ge~v~~~~~~-~~~~fl--~~L~~fl~~~~  139 (147)
T d2dlxa1         112 TGQKLVEWHQL-DVSSFL--DQVTGFLGEHG  139 (147)
T ss_dssp             TCCCCEEESSC-CHHHHH--HHHHHHHHHTC
T ss_pred             CCeEecccCCC-CHHHHH--HHHHHHHhhCC
Confidence             544   4554 334433  23777776443