Citrus Sinensis ID: 048612

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-----
MVKETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSISRETMLDPTAVFALLFGSELFEDYIGHLAVASMASTELARESDNPEKLNDKLKASVVQREREERLARLLKDFLNQYVRGDKDGFLQRAESEGKRMSAVAFGVDILHTIGYIYSRQAAQELGKKALYLGVPFVAEWVRNKGHFWKSQITAAKGAFQLLQLQEDIRRQFKVDGSGPENDVETHIRLNKETLMNSLWKLNVVDIEVTLLHVCQMVLKENNVRKEELKARAVALKTLGKIFQDKQTENAGTSRKKNAADTDDDGNSSDSSSEDDSPRALSYRTPLLTQGIGRLFRCLCNPAFDVDDDEIIYKSK
ccccccHHHHccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccccccHHHHHHHcccccHHHHHHcHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccc
ccccccHHHHccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccEEEEcc
mvketeyydilgvnpsasEEEIRKAYYLKARqvhpdknpndpqAAERFQVLGEAYQvlsdpfqreaydkngkysisretmlDPTAVFALLFGSELFEDYIGHLAVASMASTelaresdnpeklnDKLKASVVQREREERLARLLKDFLNQYVRGDKDGFLQRAESEGKRMSAVAFGVDILHTIGYIYSRQAAQELGKKALYLGVPFVAEWVRNKGHFWKSQITAAKGAFQLLQLQEDIRRQfkvdgsgpendveTHIRLNKETLMNSLWKLNVVDIEVTLLHVCQMVLKENNVRKEELKARAVALKTLGKIfqdkqtenagtsrkknaadtdddgnssdssseddspralsyrtplltqgIGRLFRclcnpafdvdddeiiyksk
mvketeyydilgvnpsaseEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSISRETMLDPTAVFALLFGSELFEDYIGHLAVASMASTELaresdnpeklndklkasvvqreREERLARLLKDflnqyvrgdkDGFLQRAESEGKRMSAVAFGVDILHTIGYIYSRQAAQELGKKALYLGVPFVAEWVRNKGHFWKSQITAAKGAFQLLQLQEDIRRQFkvdgsgpendvETHIRLNKETLMNSLWKLNVVDIEVTLLHVCQMVLkennvrkeeLKARAVALKtlgkifqdkqtenagtsrkknaadtdddgnssdssseddspralsYRTPLLTQGIGRLFRCLCNPafdvdddeiiyksk
MVKETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSISRETMLDPTAVFALLFGSELFEDYIGHLAVASMASTELARESDNPEKLNDKLKASVVQrereerlarllKDFLNQYVRGDKDGFLQRAESEGKRMSAVAFGVDILHTIGYIYSRQAAQELGKKALYLGVPFVAEWVRNKGHFWKSQITAAKGAFQLLQLQEDIRRQFKVDGSGPENDVETHIRLNKETLMNSLWKLNVVDIEVTLLHVCQMVLKENNVRKEELKARAVALKTLGKIFQDKQTENAGTSRKKNAAdtdddgnssdssseddsPRALSYRTPLLTQGIGRLFRCLCNPAFDVDDDEIIYKSK
******YYDILGV***********AYYL*******************FQVLGEAYQVLSDPFQREAYDKNGKYSISRETMLDPTAVFALLFGSELFEDYIGHLAVAS********************************LARLLKDFLNQYVRGDKDGFL*********MSAVAFGVDILHTIGYIYSRQAAQELGKKALYLGVPFVAEWVRNKGHFWKSQITAAKGAFQLLQLQEDIRRQFKV********VETHIRLNKETLMNSLWKLNVVDIEVTLLHVCQMVLKENNVRKEELKARAVALKTLGKIF***************************************YRTPLLTQGIGRLFRCLCNPAFDVDDDEIIY***
*VKETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKY**********TAVFALLFGSELFEDYIGHLAVAS***********************VVQREREERLARLLKDFLNQYVRGDKDGFLQRAESEGKRMSAVAFGVDILHTIGYIYSRQAAQELGKKALYLGVPFVAEWVRNKGHFWKSQITAAKGAFQL*****************************KETLMNSLWKLNVVDIEVTLLHVCQMVLKENNVRKEELKARAVALKTLG**************************************************GIGRLFRCLCNPAFDVDDDEIIYK**
MVKETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSISRETMLDPTAVFALLFGSELFEDYIGHLAVASM*************KLNDKLKASVVQREREERLARLLKDFLNQYVRGDKDGFLQRAESEGKRMSAVAFGVDILHTIGYIYSRQAAQELGKKALYLGVPFVAEWVRNKGHFWKSQITAAKGAFQLLQLQEDIRRQFKVDGSGPENDVETHIRLNKETLMNSLWKLNVVDIEVTLLHVCQMVLKENNVRKEELKARAVALKTLGKIFQDKQ*********************************LSYRTPLLTQGIGRLFRCLCNPAFDVDDDEIIYKSK
****TEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSISRETMLDPTAVFALLFGSELFEDYIGHLAVASMASTELARESDNPEKLNDKLKASVVQREREERLARLLKDFLNQYVRGDKDGFLQRAESEGKRMSAVAFGVDILHTIGYIYSRQAAQELGKKALYLGVPFVAEWVRNKGHFWKSQITAAKGAFQLLQLQEDIRRQFKVDGSGPENDVETHIRLNKETLMNSLWKLNVVDIEVTLLHVCQMVLKENNVRKEELKARAVALKTLGKIFQDKQT********************************LSYRTPLLTQGIGRLFRCLCNPAFDVDDDEIIYKSK
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MVKETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSISRETMLDPTAVFALLFGSELFEDYIGHLAVASMASTELARESDNPEKLNDKLKASVVQREREERLARLLKDFLNQYVRGDKDGFLQRAESEGKRMSAVAFGVDILHTIGYIYSRQAAQELGKKALYLGVPFVAEWVRNKGHFWKSQITAAKGAFQLLQLQEDIRRQFKVDGSGPENDVETHIRLNKETLMNSLWKLNVVDIEVTLLHVCQMVLKENNVRKEELKARAVALKTLGKIFQDKQTENAGTSRKKNAADTDDDGNSSDSSSEDDSPRALSYRTPLLTQGIGRLFRCLCNPAFDVDDDEIIYKSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query385 2.2.26 [Sep-21-2011]
Q8GYX8398 Chaperone protein dnaJ 10 no no 0.883 0.854 0.577 1e-112
P39101391 Protein CAJ1 OS=Saccharom yes no 0.771 0.759 0.271 2e-29
P40564432 DnaJ-like protein 1 OS=Sa no no 0.272 0.243 0.528 2e-23
Q10209392 Uncharacterized J domain- yes no 0.779 0.765 0.283 6e-23
O59731355 Uncharacterized J domain- no no 0.789 0.856 0.298 1e-22
Q8WW22397 DnaJ homolog subfamily A yes no 0.233 0.226 0.479 4e-18
Q9JMC3397 DnaJ homolog subfamily A yes no 0.233 0.226 0.479 6e-18
Q5E954397 DnaJ homolog subfamily A no no 0.233 0.226 0.463 1e-17
Q5NVI9396 DnaJ homolog subfamily A no no 0.233 0.227 0.463 1e-17
P31689397 DnaJ homolog subfamily A no no 0.233 0.226 0.463 1e-17
>sp|Q8GYX8|DNJ10_ARATH Chaperone protein dnaJ 10 OS=Arabidopsis thaliana GN=ATJ10 PE=2 SV=2 Back     alignment and function desciption
 Score =  405 bits (1041), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/353 (57%), Positives = 271/353 (76%), Gaps = 13/353 (3%)

Query: 1   MVKETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSD 60
           MVKETEYYD+LGV+P+A+E EI+KAYY+KARQVHPDKNPNDPQAA  FQVLGEAYQVLSD
Sbjct: 1   MVKETEYYDVLGVSPTATESEIKKAYYIKARQVHPDKNPNDPQAAHNFQVLGEAYQVLSD 60

Query: 61  PFQREAYDKNGKYSISRETMLDPTAVFALLFGSELFEDYIGHLAVASMASTELARESD-- 118
             QR+AYD  GK  IS + ++DP A+FA+LFGSELFE YIG LA+ASMAS ++  E D  
Sbjct: 61  SGQRQAYDACGKSGISTDAIIDPAAIFAMLFGSELFEGYIGQLAMASMASLDIFTEGDQF 120

Query: 119 NPEKLNDKLKASVVQREREERLARLLKDFLNQYVRGDKDGFLQRAESEGKRMSAVAFGVD 178
           + +K+ +KL+  +VQ+ERE++LA++LKD LN+YV  +KD F+  AE+E  R+S  A+GVD
Sbjct: 121 DTKKIQEKLR--IVQKEREDKLAQILKDRLNEYVI-NKDEFISNAEAEVARLSNAAYGVD 177

Query: 179 ILHTIGYIYSRQAAQELGKKALYLGVPFVAEWVRNKGHFWKSQITAAKGAFQLLQLQEDI 238
           +L+TIGYIY RQAA+ELGKKA+YLGVPF+AEW RNKGHF KSQ+TAA GA+ L QLQE++
Sbjct: 178 MLNTIGYIYVRQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQLTAATGAYALFQLQEEM 237

Query: 239 RRQFKVDGSGPENDVETHIRLNKETLMNSLWKLNVVDIEVTLLHVCQMVLKENNVRKEEL 298
           +RQ   +G+  E ++E +++ +K  +++SLWKLNV DIE TL  VCQ+VL++   ++EEL
Sbjct: 238 KRQLNTEGNYTEEELEEYLQAHKRVMIDSLWKLNVADIEATLCRVCQLVLQDPEAKREEL 297

Query: 299 KARAVALKTLGKIFQDKQT-------ENAGTSR-KKNAADTDDDGNSSDSSSE 343
           + RA  LK LG+IFQ  +T       EN+   +   N  + D+D ++S  SSE
Sbjct: 298 RTRARGLKALGRIFQRAKTASESDPLENSEPQKLNGNGKNHDEDTSTSPKSSE 350
Have a continuous role in plant development probably in the structural organization of compartments.
Arabidopsis thaliana (taxid: 3702)
>sp|P39101|CAJ1_YEAST Protein CAJ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAJ1 PE=1 SV=1 Back     alignment and function description
>sp|P40564|DJP1_YEAST DnaJ-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DJP1 PE=1 SV=1 Back     alignment and function description
>sp|Q10209|YAY1_SCHPO Uncharacterized J domain-containing protein C4H3.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4H3.01 PE=1 SV=1 Back     alignment and function description
>sp|O59731|YHXB_SCHPO Uncharacterized J domain-containing protein C3E7.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3E7.11c PE=3 SV=1 Back     alignment and function description
>sp|Q8WW22|DNJA4_HUMAN DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1 Back     alignment and function description
>sp|Q9JMC3|DNJA4_MOUSE DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1 Back     alignment and function description
>sp|Q5E954|DNJA1_BOVIN DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2 Back     alignment and function description
>sp|Q5NVI9|DNJA1_PONAB DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1 Back     alignment and function description
>sp|P31689|DNJA1_HUMAN DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query385
225457849384 PREDICTED: chaperone protein dnaJ 10-lik 0.994 0.997 0.829 0.0
302142728405 unnamed protein product [Vitis vinifera] 1.0 0.950 0.790 0.0
255558464383 Chaperone protein dnaJ, putative [Ricinu 0.992 0.997 0.836 0.0
449453015388 PREDICTED: chaperone protein dnaJ 10-lik 0.994 0.987 0.779 1e-175
224085043385 predicted protein [Populus trichocarpa] 0.992 0.992 0.809 1e-175
356552749382 PREDICTED: chaperone protein dnaJ 10-lik 0.989 0.997 0.779 1e-173
449517070375 PREDICTED: chaperone protein dnaJ 10-lik 0.968 0.994 0.790 1e-173
224062970370 predicted protein [Populus trichocarpa] 0.958 0.997 0.766 1e-171
356546924382 PREDICTED: chaperone protein dnaJ 10-lik 0.989 0.997 0.766 1e-171
30699227379 DNAJ heat shock N-terminal domain-contai 0.981 0.997 0.751 1e-165
>gi|225457849|ref|XP_002279104.1| PREDICTED: chaperone protein dnaJ 10-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  659 bits (1699), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/386 (82%), Positives = 361/386 (93%), Gaps = 3/386 (0%)

Query: 1   MVKETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSD 60
           MVKETEYYD+LGV+P+ASEEEIRKAYYLKA+QVHPDKNP+DP AAERFQVLGEAYQVLSD
Sbjct: 1   MVKETEYYDVLGVSPTASEEEIRKAYYLKAKQVHPDKNPSDPLAAERFQVLGEAYQVLSD 60

Query: 61  PFQREAYDKNGKYSISRETMLDPTAVFALLFGSELFEDYIGHLAVASMASTELARESDNP 120
           P QR+AYD+NGKY IS+ETMLDPTAVFALLFGSELFE+YIGHLAVASMAS+ELA ESDNP
Sbjct: 61  PMQRDAYDRNGKYCISKETMLDPTAVFALLFGSELFENYIGHLAVASMASSELAEESDNP 120

Query: 121 EKLNDKLKASVVQREREERLARLLKDFLNQYVRGDKDGFLQRAESEGKRMSAVAFGVDIL 180
           EKL+DKLKA  VQ+EREERLARLLKDFLNQYV+GDK GFL  AESE KR+S   FG DIL
Sbjct: 121 EKLHDKLKA--VQKEREERLARLLKDFLNQYVQGDKRGFLHCAESEAKRLSDAVFGADIL 178

Query: 181 HTIGYIYSRQAAQELGKKALYLGVPFVAEWVRNKGHFWKSQITAAKGAFQLLQLQEDIRR 240
           HTIGY+Y+RQAAQELGKK +YLGVPF+AEWVRNKGHFWKSQITAAKGAFQLLQLQEDIRR
Sbjct: 179 HTIGYVYARQAAQELGKKVIYLGVPFLAEWVRNKGHFWKSQITAAKGAFQLLQLQEDIRR 238

Query: 241 QFKVDGSGPENDVETHIRLNKETLMNSLWKLNVVDIEVTLLHVCQMVLKENNVRKEELKA 300
           QFK+DGSGPENDVE+HIR+NK+TLMNSLWKLNVVDIEVTL+HVCQ+VL+ENNV+KEELKA
Sbjct: 239 QFKMDGSGPENDVESHIRMNKDTLMNSLWKLNVVDIEVTLIHVCQLVLQENNVKKEELKA 298

Query: 301 RAVALKTLGKIFQ-DKQTENAGTSRKKNAADTDDDGNSSDSSSEDDSPRALSYRTPLLTQ 359
           RA+ALK LGKIFQ +K   + GTS+ +N +D +++G+SSDSS E+D+PRALSYRTPL+TQ
Sbjct: 299 RALALKLLGKIFQREKLARSGGTSKSRNVSDINEEGSSSDSSGEEDTPRALSYRTPLITQ 358

Query: 360 GIGRLFRCLCNPAFDVDDDEIIYKSK 385
           GIGRLFRCLCNPAFDVDD+EI+YKSK
Sbjct: 359 GIGRLFRCLCNPAFDVDDEEIVYKSK 384

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|302142728|emb|CBI19931.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255558464|ref|XP_002520257.1| Chaperone protein dnaJ, putative [Ricinus communis] gi|223540476|gb|EEF42043.1| Chaperone protein dnaJ, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449453015|ref|XP_004144254.1| PREDICTED: chaperone protein dnaJ 10-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224085043|ref|XP_002307468.1| predicted protein [Populus trichocarpa] gi|222856917|gb|EEE94464.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356552749|ref|XP_003544725.1| PREDICTED: chaperone protein dnaJ 10-like [Glycine max] Back     alignment and taxonomy information
>gi|449517070|ref|XP_004165569.1| PREDICTED: chaperone protein dnaJ 10-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|224062970|ref|XP_002300954.1| predicted protein [Populus trichocarpa] gi|222842680|gb|EEE80227.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356546924|ref|XP_003541870.1| PREDICTED: chaperone protein dnaJ 10-like [Glycine max] Back     alignment and taxonomy information
>gi|30699227|ref|NP_177828.2| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] gi|332197805|gb|AEE35926.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query385
TAIR|locus:2025252379 AT1G77020 [Arabidopsis thalian 0.981 0.997 0.715 1.7e-144
TAIR|locus:2030101398 AT1G76700 [Arabidopsis thalian 0.815 0.788 0.592 9.4e-98
TAIR|locus:2050120346 AT2G21510 [Arabidopsis thalian 0.846 0.942 0.519 6.9e-86
TAIR|locus:2136378345 AT4G39150 [Arabidopsis thalian 0.802 0.895 0.526 5.8e-82
SGD|S000001443432 DJP1 "Cytosolic J-domain-conta 0.332 0.296 0.469 3e-39
DICTYBASE|DDB_G0267994408 DDB_G0267994 "DNAJ heat shock 0.763 0.720 0.337 8.9e-38
UNIPROTKB|G4MPU8 540 MGG_09235 "DnaJ domain-contain 0.272 0.194 0.537 3e-35
CGD|CAL0003840 508 DJP1 [Candida albicans (taxid: 0.324 0.246 0.515 1.1e-33
UNIPROTKB|Q59NB9 508 DJP1 "Potential peroxisomal pr 0.324 0.246 0.515 1.1e-33
ASPGD|ASPL0000040613466 AN3375 [Emericella nidulans (t 0.316 0.261 0.447 1.3e-33
TAIR|locus:2025252 AT1G77020 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1412 (502.1 bits), Expect = 1.7e-144, P = 1.7e-144
 Identities = 276/386 (71%), Positives = 315/386 (81%)

Query:     1 MVKETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSD 60
             MVKET YYD+LGV PSASEEEIRKAYY+KARQVHPDKN  DP AAE+FQVLGEAYQVLSD
Sbjct:     1 MVKETVYYDVLGVTPSASEEEIRKAYYIKARQVHPDKNQGDPLAAEKFQVLGEAYQVLSD 60

Query:    61 PFQREAYDKNGKYSISRETMLDPTAVFALLFGSELFEDYIGHLAVASMASTELARESDNP 120
             P  REAYD+ GK+S  +ETM+DPTAVFALLFGSELFEDYIGHLAVASMAST++A E +N 
Sbjct:    61 PVHREAYDRTGKFSAPKETMVDPTAVFALLFGSELFEDYIGHLAVASMASTQMASEIENS 120

Query:   121 EKLNDKLKASVVQXXXXXXXXXXXKDFLNQYVRGDKDGFLQRAESEGKRMSAVAFGVDIL 180
             ++  DKLKA  VQ           KDFL+QYV GDK+GF+ RAESE KR+S  AFG D+L
Sbjct:   121 DQFQDKLKA--VQKEREENLSRFLKDFLSQYVHGDKEGFISRAESEAKRLSDAAFGADML 178

Query:   181 HTIGYIYSRQAAQELGKKALYLGVPFVAEWVRNKGHFWKSQITAAKGAFQLLQLQEDIRR 240
             HTIGY+Y+RQAAQELGK+ALYLGVPFVAEWVRNKGH WKSQI+AAKGA QLLQLQE+  R
Sbjct:   179 HTIGYVYTRQAAQELGKRALYLGVPFVAEWVRNKGHSWKSQISAAKGALQLLQLQEESNR 238

Query:   241 QFKVDGSGPENDVETHIRLNKETLMNSLWKLNVVDIEVTLLHVCQMVLKENNVRKEELKA 300
             + K DG+ P N++E+HI+ NKETLM SLWKLNVVDIEVTLLHVCQMV +ENN+RKEELK+
Sbjct:   239 RLKKDGTSPANELESHIQTNKETLMGSLWKLNVVDIEVTLLHVCQMVFRENNLRKEELKS 298

Query:   301 RAVALKTLGKIFQ-DKQTENAGTSRKKNAAXXXXXXXXXXXXXXXXXPRALSYRTPLLTQ 359
             RA+ALK LGKIFQ +KQ++N  TSRK++                    + LSYRTPLLTQ
Sbjct:   299 RAMALKILGKIFQQEKQSKNGTTSRKEDEDSDDDDSSSDDDSS-----QPLSYRTPLLTQ 353

Query:   360 GIGRLFRCLCNPAFDVDDDEIIYKSK 385
             GIGRLFRCLCNPAFDVDDDEI+YK K
Sbjct:   354 GIGRLFRCLCNPAFDVDDDEIVYKGK 379
GO:0005737 "cytoplasm" evidence=ISM
GO:0006457 "protein folding" evidence=IEA;ISS
GO:0031072 "heat shock protein binding" evidence=IEA
GO:0051082 "unfolded protein binding" evidence=IEA
TAIR|locus:2030101 AT1G76700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050120 AT2G21510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136378 AT4G39150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
SGD|S000001443 DJP1 "Cytosolic J-domain-containing protein" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0267994 DDB_G0267994 "DNAJ heat shock N-terminal domain-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|G4MPU8 MGG_09235 "DnaJ domain-containing protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
CGD|CAL0003840 DJP1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q59NB9 DJP1 "Potential peroxisomal protein import protein" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
ASPGD|ASPL0000040613 AN3375 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_LG_II000345
hypothetical protein (370 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.41.327.1
hypothetical protein (212 aa)
  •     0.493
gw1.XIII.1526.1
annotation not avaliable (81 aa)
  •     0.491
gw1.261.46.1
SubName- Full=Putative uncharacterized protein; (648 aa)
  •     0.490
grail3.0261001101
hypothetical protein (648 aa)
  •     0.490
eugene3.00080489
hypothetical protein (649 aa)
  •     0.490
eugene3.00080482
hypothetical protein (648 aa)
  •     0.490
estExt_fgenesh4_pm.C_LG_VIII0195
hypothetical protein (649 aa)
  •     0.490
estExt_fgenesh4_pg.C_LG_X1852
hypothetical protein (648 aa)
  •     0.490
fgenesh4_pm.C_LG_III000644
hypothetical protein (651 aa)
  •     0.489
eugene3.02080009
hypothetical protein (656 aa)
  •     0.489

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query385
pfam14308204 pfam14308, DnaJ-X, X-domain of DnaJ-containing 4e-64
pfam0022663 pfam00226, DnaJ, DnaJ domain 1e-27
COG0484371 COG0484, DnaJ, DnaJ-class molecular chaperone with 5e-25
cd0625755 cd06257, DnaJ, DnaJ domain or J-domain 1e-23
TIGR02349354 TIGR02349, DnaJ_bact, chaperone protein DnaJ 6e-22
PRK10767371 PRK10767, PRK10767, chaperone protein DnaJ; Provis 2e-21
smart0027160 smart00271, DnaJ, DnaJ molecular chaperone homolog 4e-21
PRK14284391 PRK14284, PRK14284, chaperone protein DnaJ; Provis 2e-20
PRK14289386 PRK14289, PRK14289, chaperone protein DnaJ; Provis 5e-20
PRK14279392 PRK14279, PRK14279, chaperone protein DnaJ; Provis 5e-20
PRK14301373 PRK14301, PRK14301, chaperone protein DnaJ; Provis 3e-19
PRK14291382 PRK14291, PRK14291, chaperone protein DnaJ; Provis 5e-19
PRK14277386 PRK14277, PRK14277, chaperone protein DnaJ; Provis 8e-19
PRK14294366 PRK14294, PRK14294, chaperone protein DnaJ; Provis 1e-18
PRK14278378 PRK14278, PRK14278, chaperone protein DnaJ; Provis 5e-18
PRK14295389 PRK14295, PRK14295, chaperone protein DnaJ; Provis 7e-18
COG2214237 COG2214, CbpA, DnaJ-class molecular chaperone [Pos 2e-17
PRK14293374 PRK14293, PRK14293, chaperone protein DnaJ; Provis 3e-17
PRK14297380 PRK14297, PRK14297, chaperone protein DnaJ; Provis 7e-17
PRK14286372 PRK14286, PRK14286, chaperone protein DnaJ; Provis 1e-16
PRK14276380 PRK14276, PRK14276, chaperone protein DnaJ; Provis 2e-16
PRK14281397 PRK14281, PRK14281, chaperone protein DnaJ; Provis 3e-16
PRK14298377 PRK14298, PRK14298, chaperone protein DnaJ; Provis 6e-16
PRK14282369 PRK14282, PRK14282, chaperone protein DnaJ; Provis 1e-15
PRK14292371 PRK14292, PRK14292, chaperone protein DnaJ; Provis 1e-15
PRK14299291 PRK14299, PRK14299, chaperone protein DnaJ; Provis 1e-15
PRK14290365 PRK14290, PRK14290, chaperone protein DnaJ; Provis 2e-15
PRK14280376 PRK14280, PRK14280, chaperone protein DnaJ; Provis 2e-15
PRK14283378 PRK14283, PRK14283, chaperone protein DnaJ; Provis 2e-14
TIGR03835 871 TIGR03835, termin_org_DnaJ, terminal organelle ass 3e-13
PTZ00341 1136 PTZ00341, PTZ00341, Ring-infected erythrocyte surf 2e-12
PRK14288369 PRK14288, PRK14288, chaperone protein DnaJ; Provis 7e-12
PRK14285365 PRK14285, PRK14285, chaperone protein DnaJ; Provis 9e-12
PTZ00037421 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov 1e-11
PRK14287371 PRK14287, PRK14287, chaperone protein DnaJ; Provis 2e-11
PRK14296372 PRK14296, PRK14296, chaperone protein DnaJ; Provis 3e-11
PRK14300372 PRK14300, PRK14300, chaperone protein DnaJ; Provis 2e-10
PRK10266306 PRK10266, PRK10266, curved DNA-binding protein Cbp 3e-10
COG5407 610 COG5407, SEC63, Preprotein translocase subunit Sec 3e-05
PRK00294173 PRK00294, hscB, co-chaperone HscB; Provisional 7e-04
>gnl|CDD|222667 pfam14308, DnaJ-X, X-domain of DnaJ-containing Back     alignment and domain information 
 Score =  203 bits (518), Expect = 4e-64
 Identities = 68/183 (37%), Positives = 101/183 (55%)

Query: 131 VVQREREERLARLLKDFLNQYVRGDKDGFLQRAESEGKRMSAVAFGVDILHTIGYIYSRQ 190
             Q+EREE LA  L+D L+ YV GDKD F ++ E E + +   +FG++ILHTIG++Y  +
Sbjct: 1   EEQKEREEELAEKLRDRLSPYVEGDKDEFREKLEQEAEDLKMESFGLEILHTIGWVYENK 60

Query: 191 AAQELGKKALYLGVPFVAEWVRNKGHFWKSQITAAKGAFQLLQLQEDIRRQFKVDGSGPE 250
           A   LGKK  +LG+  +   V++KG   KS       A       E++++  +  G   E
Sbjct: 61  ANSFLGKKKTFLGISGIFTSVKDKGRSVKSTFNTLSSALDAQSTMEEMKKLEEKGGELTE 120

Query: 251 NDVETHIRLNKETLMNSLWKLNVVDIEVTLLHVCQMVLKENNVRKEELKARAVALKTLGK 310
            ++          ++ + W ++  DIE TL  VC  VLK+ +V K+E   RA AL  LGK
Sbjct: 121 EELAEMEEKVTGKILAAAWAISKFDIESTLREVCDKVLKDKSVDKKERIKRAEALLILGK 180

Query: 311 IFQ 313
           IFQ
Sbjct: 181 IFQ 183

IN certain plant and yeast proteins, the DnaJ-1 proteins have a three-domain structure. The x-domain lies between the N-terminal DnaJ and the C-terminal Z domains. The exact function is not known. Length = 204
>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain Back     alignment and domain information
>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain Back     alignment and domain information
>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ Back     alignment and domain information
>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain Back     alignment and domain information
>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ Back     alignment and domain information
>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional Back     alignment and domain information
>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional Back     alignment and domain information
>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional Back     alignment and domain information
>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] Back     alignment and domain information
>gnl|CDD|166894 PRK00294, hscB, co-chaperone HscB; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 385
PTZ00341 1136 Ring-infected erythrocyte surface antigen; Provisi 100.0
PF14308204 DnaJ-X: X-domain of DnaJ-containing 100.0
KOG0691296 consensus Molecular chaperone (DnaJ superfamily) [ 100.0
PTZ00475282 RESA-like protein; Provisional 100.0
COG0484371 DnaJ DnaJ-class molecular chaperone with C-termina 99.92
KOG0713336 consensus Molecular chaperone (DnaJ superfamily) [ 99.9
KOG0712337 consensus Molecular chaperone (DnaJ superfamily) [ 99.85
PRK14288369 chaperone protein DnaJ; Provisional 99.84
PRK14296372 chaperone protein DnaJ; Provisional 99.82
PRK14286372 chaperone protein DnaJ; Provisional 99.82
PRK14277386 chaperone protein DnaJ; Provisional 99.8
PRK14282369 chaperone protein DnaJ; Provisional 99.8
PRK14298377 chaperone protein DnaJ; Provisional 99.8
PRK14285365 chaperone protein DnaJ; Provisional 99.8
PRK14287371 chaperone protein DnaJ; Provisional 99.8
PRK14294366 chaperone protein DnaJ; Provisional 99.79
PTZ00037421 DnaJ_C chaperone protein; Provisional 99.79
PRK14276380 chaperone protein DnaJ; Provisional 99.79
PRK14297380 chaperone protein DnaJ; Provisional 99.79
PRK14283378 chaperone protein DnaJ; Provisional 99.79
PRK14284391 chaperone protein DnaJ; Provisional 99.78
PRK14301373 chaperone protein DnaJ; Provisional 99.78
PRK14299291 chaperone protein DnaJ; Provisional 99.77
PRK14278378 chaperone protein DnaJ; Provisional 99.77
PRK14280376 chaperone protein DnaJ; Provisional 99.77
PRK10767371 chaperone protein DnaJ; Provisional 99.77
PRK14279392 chaperone protein DnaJ; Provisional 99.77
PRK14295389 chaperone protein DnaJ; Provisional 99.77
PRK14291382 chaperone protein DnaJ; Provisional 99.76
PHA03102153 Small T antigen; Reviewed 99.76
PRK14290365 chaperone protein DnaJ; Provisional 99.75
KOG0716279 consensus Molecular chaperone (DnaJ superfamily) [ 99.75
PRK14289386 chaperone protein DnaJ; Provisional 99.75
PRK14281397 chaperone protein DnaJ; Provisional 99.75
TIGR02349354 DnaJ_bact chaperone protein DnaJ. This model repre 99.73
KOG0718 546 consensus Molecular chaperone (DnaJ superfamily) [ 99.73
PRK14292371 chaperone protein DnaJ; Provisional 99.73
PRK14300372 chaperone protein DnaJ; Provisional 99.71
PF0022664 DnaJ: DnaJ domain; InterPro: IPR001623 The prokary 99.7
PRK14293374 chaperone protein DnaJ; Provisional 99.7
KOG0715288 consensus Molecular chaperone (DnaJ superfamily) [ 99.7
KOG0717 508 consensus Molecular chaperone (DnaJ superfamily) [ 99.7
PRK10266306 curved DNA-binding protein CbpA; Provisional 99.69
KOG0719264 consensus Molecular chaperone (DnaJ superfamily) [ 99.63
smart0027160 DnaJ DnaJ molecular chaperone homology domain. 99.6
TIGR03835 871 termin_org_DnaJ terminal organelle assembly protei 99.6
COG2214237 CbpA DnaJ-class molecular chaperone [Posttranslati 99.59
KOG0721230 consensus Molecular chaperone (DnaJ superfamily) [ 99.57
cd0625755 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho 99.57
PRK00294173 hscB co-chaperone HscB; Provisional 99.47
KOG0624504 consensus dsRNA-activated protein kinase inhibitor 99.46
PRK05014171 hscB co-chaperone HscB; Provisional 99.43
PRK03578176 hscB co-chaperone HscB; Provisional 99.4
PRK01356166 hscB co-chaperone HscB; Provisional 99.39
KOG0550486 consensus Molecular chaperone (DnaJ superfamily) [ 99.36
KOG0714306 consensus Molecular chaperone (DnaJ superfamily) [ 99.33
KOG0722329 consensus Molecular chaperone (DnaJ superfamily) [ 99.3
KOG0720490 consensus Molecular chaperone (DnaJ superfamily) [ 99.24
PHA02624 647 large T antigen; Provisional 99.14
PTZ00100116 DnaJ chaperone protein; Provisional 99.14
PRK09430267 djlA Dna-J like membrane chaperone protein; Provis 99.13
COG5407 610 SEC63 Preprotein translocase subunit Sec63 [Intrac 99.02
PRK01773173 hscB co-chaperone HscB; Provisional 99.01
KOG1150250 consensus Predicted molecular chaperone (DnaJ supe 98.85
TIGR00714157 hscB Fe-S protein assembly co-chaperone HscB. This 98.83
COG5269379 ZUO1 Ribosome-associated chaperone zuotin [Transla 98.7
KOG1789 2235 consensus Endocytosis protein RME-8, contains DnaJ 98.08
KOG0568342 consensus Molecular chaperone (DnaJ superfamily) [ 98.03
KOG0723112 consensus Molecular chaperone (DnaJ superfamily) [ 97.24
KOG3192168 consensus Mitochondrial J-type chaperone [Posttran 96.94
COG1076174 DjlA DnaJ-domain-containing proteins 1 [Posttransl 95.39
COG1076174 DjlA DnaJ-domain-containing proteins 1 [Posttransl 95.24
KOG0431453 consensus Auxilin-like protein and related protein 94.76
PF03656127 Pam16: Pam16; InterPro: IPR005341 The Pam16 protei 87.68
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional Back     alignment and domain information 
Probab=100.00  E-value=7.5e-66  Score=547.58  Aligned_cols=304  Identities=21%  Similarity=0.346  Sum_probs=266.4

Q ss_pred             CCCCCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCcccCccCC
Q 048612            1 MVKETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSISRETM   80 (385)
Q Consensus         1 m~~~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~~~~~~~   80 (385)
                      |+++++||+||||+++||..+||+|||+||++||||+++++ .+.++|+.|++||+|||||.+|+.||++|..+++..++
T Consensus       569 ~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~~~~  647 (1136)
T PTZ00341        569 EIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGVNF  647 (1136)
T ss_pred             cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCCCCc
Confidence            57899999999999999999999999999999999999864 68899999999999999999999999999999998999


Q ss_pred             CChhhhhhhhhccchHHhhhhHHHHHHhhhhhhhccC--CC----hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 048612           81 LDPTAVFALLFGSELFEDYIGHLAVASMASTELARES--DN----PEKLNDKLKASVVQREREERLARLLKDFLNQYVRG  154 (385)
Q Consensus        81 ~d~~~~f~~~Fg~~~f~~~~G~l~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~q~~Re~~La~~L~~~l~~yv~~  154 (385)
                      +||..+| ++||++.|.+|||.+.|++++...+....  .+    .+.+++.|++  .|++||.+||..|++||++||+|
T Consensus       648 iDP~~Ff-mlFgse~F~dYiG~l~iatl~k~~fe~~~s~~d~~~~~e~l~e~m~~--~QkeRE~kLA~~LkdRL~~YVdg  724 (1136)
T PTZ00341        648 IHPSIFY-LLASLEKFADFTGSPQIVTLLKFFFEKKLSMNDLDNKSEHLLKFMEQ--YQKEREAHISENLINILQPCIAG  724 (1136)
T ss_pred             cCHHHHH-HHhhhHHHHHhcCCHHHHHHHHHHHHhcccccchhhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcc
Confidence            9999766 78999999999999999998776543322  12    2566677776  89999999999999999999999


Q ss_pred             ChHHHHHHHHHHHhHhhhccchHHHHHHHHHHHHHHHHHHHhhcccccCchhHHHHHhhhhhhHHHHHHHHHHHH-HHHH
Q 048612          155 DKDGFLQRAESEGKRMSAVAFGVDILHTIGYIYSRQAAQELGKKALYLGVPFVAEWVRNKGHFWKSQITAAKGAF-QLLQ  233 (385)
Q Consensus       155 ~~~~f~~~~~~Ea~~L~~~sfG~~iL~~IG~vY~~~A~~~l~~~~~~lG~~~~~~~~r~k~~~~k~~~~~a~~a~-~~~~  233 (385)
                      +. .|...++.||+.|+.+|||..|||+|||||.++|++|||++++  |+++++.+++.++.+++++++.+++++ .++.
T Consensus       725 d~-~w~~~~e~Ei~~L~~sSFG~~IL~tIGwiY~n~A~~fL~~~k~--g~~kl~~r~k~n~~~v~~~~n~lss~lkda~~  801 (1136)
T PTZ00341        725 DR-KWDVPIIDKIEELKGSPFDIAIIDSIGWIFKHVAKSHLKKPKK--AAKKLEQRSKANKEELANENNKLMNILKEYFG  801 (1136)
T ss_pred             cH-HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhccch--hHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Confidence            96 5999999999999999999999999999999999999999876  778899999999999999988888777 5555


Q ss_pred             HHHHHHHhcccC----------C------CCCHhhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHH
Q 048612          234 LQEDIRRQFKVD----------G------SGPENDVETHIRLNKETLMNSLWKLNVVDIEVTLLHVCQMVLKENNVRKEE  297 (385)
Q Consensus       234 ~~~~~~k~~~~~----------g------~~~ee~~~~~~~~~~~~iL~alW~~~~~DIe~Tlr~Vc~kVL~D~~V~~e~  297 (385)
                      .++.+.+.....          +      ..+++    .+...++++|.++|+++++|||+|||.||++||.|++||.++
T Consensus       802 t~eq~nki~~n~En~t~~~~nen~~k~i~~l~~e----ee~~ilgkiL~~iw~isl~DIE~TVR~VCekVL~Dk~Vd~kt  877 (1136)
T PTZ00341        802 NNEQINSITYNFENINLNEDNENGSKKILDLNHK----DQKEIFEEIISYIVDISLSDIENTAKNAAEQILSDEGLDEKK  877 (1136)
T ss_pred             hHHHHHHhhhhhcccccccccccccccccccCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHH
Confidence            555554322100          0      01112    256678999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q 048612          298 LKARAVALKTLGKIFQDK  315 (385)
Q Consensus       298 R~kRA~aL~~LG~if~~~  315 (385)
                      |++||+||++||.+|+++
T Consensus       878 RikRAeaLkiLG~iMqk~  895 (1136)
T PTZ00341        878 LKKRAESLKKLANAIEKY  895 (1136)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999999999

>PF14308 DnaJ-X: X-domain of DnaJ-containing Back     alignment and domain information
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00475 RESA-like protein; Provisional Back     alignment and domain information
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14288 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14296 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14286 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14277 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14282 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14298 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14285 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14287 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14294 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PTZ00037 DnaJ_C chaperone protein; Provisional Back     alignment and domain information
>PRK14276 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14297 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14283 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14284 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14301 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14299 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14278 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14280 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10767 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14279 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14295 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14291 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PHA03102 Small T antigen; Reviewed Back     alignment and domain information
>PRK14290 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14289 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14281 chaperone protein DnaJ; Provisional Back     alignment and domain information
>TIGR02349 DnaJ_bact chaperone protein DnaJ Back     alignment and domain information
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14292 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14300 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein [] Back     alignment and domain information
>PRK14293 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK10266 curved DNA-binding protein CbpA; Provisional Back     alignment and domain information
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>smart00271 DnaJ DnaJ molecular chaperone homology domain Back     alignment and domain information
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ Back     alignment and domain information
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd06257 DnaJ DnaJ domain or J-domain Back     alignment and domain information
>PRK00294 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] Back     alignment and domain information
>PRK05014 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK03578 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK01356 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PHA02624 large T antigen; Provisional Back     alignment and domain information
>PTZ00100 DnaJ chaperone protein; Provisional Back     alignment and domain information
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional Back     alignment and domain information
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] Back     alignment and domain information
>PRK01773 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB Back     alignment and domain information
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only] Back     alignment and domain information
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query385
2lo1_A71 Nmr Structure Of The Protein Bc008182, A Dnaj-Like 1e-16
2och_A73 J-domain Of Dnj-12 From Caenorhabditis Elegans Leng 5e-15
2dn9_A79 Solution Structure Of J-Domain From The Dnaj Homolo 5e-14
2o37_A92 J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S 2e-13
1xbl_A107 Nmr Structure Of The J-Domain (Residues 2-76) In Th 2e-12
1bq0_A103 J-Domain (Residues 1-77) Of The Escherichia Coli N- 2e-12
2lgw_A99 Solution Structure Of The J Domain Of Hsj1a Length 3e-12
2dmx_A92 Solution Structure Of The J Domain Of Dnaj Homolog 4e-12
1bqz_A77 J-Domain (Residues 1-77) Of The Escherichia Coli N- 4e-12
1hdj_A77 Human Hsp40 (Hdj-1), Nmr Length = 77 2e-11
2ctp_A78 Solution Structure Of J-Domain From Human Dnaj Subf 3e-11
3apq_A210 Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt 1e-10
3apo_A 780 Crystal Structure Of Full-Length Erdj5 Length = 780 1e-10
2ctr_A88 Solution Structure Of J-Domain From Human Dnaj Subf 2e-10
2ctw_A109 Solution Structure Of J-Domain From Mouse Dnaj Subf 2e-10
2ej7_A82 Solution Structure Of The Dnaj Domain Of The Human 7e-10
2yua_A99 Solution Structure Of The Dnaj Domain From Human Wi 5e-09
2cug_A88 Solution Structure Of The J Domain Of The Pseudo Dn 1e-08
2ctq_A112 Solution Structure Of J-Domain From Human Dnaj Subf 3e-07
2kqx_A73 Nmr Structure Of The J-Domain (Residues 2-72) In Th 6e-07
3lz8_A329 Structure Of A Putative Chaperone Dnaj From Klebsie 3e-06
2y4t_A450 Crystal Structure Of The Human Co-Chaperone P58(Ipk 4e-04
2y4u_A450 Crystal Structure Of Human P58(Ipk) In Space Group 5e-04
>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71 Back     alignment and structure 
Iteration: 1

 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
Query: 1  MVKETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSD 60
          MVKET YYD+LGV P+A++EE++KAY   A + HPDKNPN+    E+F+ + +AY+VLSD
Sbjct: 2  MVKETTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNE---GEKFKQISQAYEVLSD 58
Query: 61 PFQREAYDKNG 71
            +RE YDK G
Sbjct: 59 AKKRELYDKGG 69
>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73 Back     alignment and structure
>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79 Back     alignment and structure
>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92 Back     alignment and structure
>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107 Back     alignment and structure
>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103 Back     alignment and structure
>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99 Back     alignment and structure
>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92 Back     alignment and structure
>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77 Back     alignment and structure
>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77 Back     alignment and structure
>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78 Back     alignment and structure
>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210 Back     alignment and structure
>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780 Back     alignment and structure
>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88 Back     alignment and structure
>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109 Back     alignment and structure
>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82 Back     alignment and structure
>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99 Back     alignment and structure
>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88 Back     alignment and structure
>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily C Menber 12 Length = 112 Back     alignment and structure
>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73 Back     alignment and structure
>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329 Back     alignment and structure
>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450 Back     alignment and structure
>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query385
2yua_A99 Williams-beuren syndrome chromosome region 18 prot 5e-28
2och_A73 Hypothetical protein DNJ-12; HSP40, J-domain, chap 1e-27
2o37_A92 Protein SIS1; HSP40, J-domain, cochaperone, APC900 3e-26
2ctq_A112 DNAJ homolog subfamily C member 12; J-domain, chap 5e-26
3apq_A210 DNAJ homolog subfamily C member 10; thioredoxin fo 7e-26
2ctw_A109 DNAJ homolog subfamily C member 5; J-domain, chape 1e-25
2dn9_A79 DNAJ homolog subfamily A member 3; J-domain, TID1, 4e-25
3lz8_A329 Putative chaperone DNAJ; structure genomics, struc 1e-24
2lgw_A99 DNAJ homolog subfamily B member 2; J domain, HSJ1A 2e-24
1hdj_A77 Human HSP40, HDJ-1; molecular chaperone; NMR {Homo 2e-24
1bq0_A103 DNAJ, HSP40; chaperone, heat shock, protein foldin 3e-24
2l6l_A155 DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, 6e-24
2dmx_A92 DNAJ homolog subfamily B member 8; DNAJ J domain, 7e-24
2ej7_A82 HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati 9e-24
2ctp_A78 DNAJ homolog subfamily B member 12; J-domain, chap 1e-23
2cug_A88 Mkiaa0962 protein; DNAJ-like domain, structural ge 2e-23
1wjz_A94 1700030A21RIK protein; J-domain, DNAJ like protein 8e-23
2ctr_A88 DNAJ homolog subfamily B member 9; J-domain, chape 9e-23
2ys8_A90 RAB-related GTP-binding protein RABJ; DNAJ domain, 3e-21
2qsa_A109 DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s 8e-21
2pf4_E174 Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, 2e-20
1gh6_A114 Large T antigen; tumor suppressor, oncoprotein, an 2e-20
3apo_A 780 DNAJ homolog subfamily C member 10; PDI family, th 3e-20
1iur_A88 KIAA0730 protein; DNAJ like domain, riken structur 4e-18
3hho_A174 CO-chaperone protein HSCB homolog; structural geno 4e-14
1fpo_A171 HSC20, chaperone protein HSCB; molecular chaperone 6e-14
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 3e-13
3uo3_A181 J-type CO-chaperone JAC1, mitochondrial; structura 9e-12
1faf_A79 Large T antigen; J domain, HPD motif, anti-paralle 3e-11
3bvo_A207 CO-chaperone protein HSCB, mitochondrial precurso; 7e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-09
1n4c_A182 Auxilin; four helix bundle, protein binding; NMR { 2e-10
2guz_A71 Mitochondrial import inner membrane translocase su 4e-09
2qwo_B92 Putative tyrosine-protein phosphatase auxilin; cha 2e-07
3ag7_A106 Putative uncharacterized protein F9E10.5; J-domain 3e-06
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99 Back     alignment and structure
 Score =  104 bits (262), Expect = 5e-28
 Identities = 27/71 (38%), Positives = 39/71 (54%)

Query: 1  MVKETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSD 60
              T  YD+LGV  +A++ +I+ AYY +    HPD+N    +AAERF  + +AY VL  
Sbjct: 13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGS 72

Query: 61 PFQREAYDKNG 71
             R  YD+  
Sbjct: 73 ATLRRKYDRGL 83
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73 Back     alignment and structure
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92 Back     alignment and structure
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112 Back     alignment and structure
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210 Back     alignment and structure
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109 Back     alignment and structure
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79 Back     alignment and structure
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329 Back     alignment and structure
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99 Back     alignment and structure
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77 Back     alignment and structure
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103 Back     alignment and structure
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155 Back     alignment and structure
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92 Back     alignment and structure
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82 Back     alignment and structure
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78 Back     alignment and structure
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88 Back     alignment and structure
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94 Back     alignment and structure
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88 Back     alignment and structure
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90 Back     alignment and structure
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109 Back     alignment and structure
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174 Back     alignment and structure
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114 Back     alignment and structure
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780 Back     alignment and structure
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88 Back     alignment and structure
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171 Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 Back     alignment and structure
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181 Back     alignment and structure
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79 Back     alignment and structure
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182 Back     alignment and structure
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71 Back     alignment and structure
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92 Back     alignment and structure
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query385
2och_A73 Hypothetical protein DNJ-12; HSP40, J-domain, chap 99.83
1hdj_A77 Human HSP40, HDJ-1; molecular chaperone; NMR {Homo 99.82
2dn9_A79 DNAJ homolog subfamily A member 3; J-domain, TID1, 99.82
1bq0_A103 DNAJ, HSP40; chaperone, heat shock, protein foldin 99.82
2ctw_A109 DNAJ homolog subfamily C member 5; J-domain, chape 99.81
2ej7_A82 HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati 99.8
2ctp_A78 DNAJ homolog subfamily B member 12; J-domain, chap 99.8
2ctq_A112 DNAJ homolog subfamily C member 12; J-domain, chap 99.8
2cug_A88 Mkiaa0962 protein; DNAJ-like domain, structural ge 99.79
2o37_A92 Protein SIS1; HSP40, J-domain, cochaperone, APC900 99.78
2ctr_A88 DNAJ homolog subfamily B member 9; J-domain, chape 99.78
2yua_A99 Williams-beuren syndrome chromosome region 18 prot 99.78
2dmx_A92 DNAJ homolog subfamily B member 8; DNAJ J domain, 99.78
2lgw_A99 DNAJ homolog subfamily B member 2; J domain, HSJ1A 99.77
1wjz_A94 1700030A21RIK protein; J-domain, DNAJ like protein 99.77
3apq_A210 DNAJ homolog subfamily C member 10; thioredoxin fo 99.75
2qsa_A109 DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s 99.74
3hho_A174 CO-chaperone protein HSCB homolog; structural geno 99.71
3bvo_A207 CO-chaperone protein HSCB, mitochondrial precurso; 99.69
3lz8_A329 Putative chaperone DNAJ; structure genomics, struc 99.69
2l6l_A155 DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, 99.68
1fpo_A171 HSC20, chaperone protein HSCB; molecular chaperone 99.68
2ys8_A90 RAB-related GTP-binding protein RABJ; DNAJ domain, 99.68
1gh6_A114 Large T antigen; tumor suppressor, oncoprotein, an 99.67
1faf_A79 Large T antigen; J domain, HPD motif, anti-paralle 99.62
1iur_A88 KIAA0730 protein; DNAJ like domain, riken structur 99.6
2pf4_E174 Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, 99.6
3uo3_A181 J-type CO-chaperone JAC1, mitochondrial; structura 99.57
2qwo_B92 Putative tyrosine-protein phosphatase auxilin; cha 99.56
1n4c_A182 Auxilin; four helix bundle, protein binding; NMR { 99.55
3apo_A 780 DNAJ homolog subfamily C member 10; PDI family, th 99.54
3ag7_A106 Putative uncharacterized protein F9E10.5; J-domain 99.53
2guz_A71 Mitochondrial import inner membrane translocase su 99.48
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 98.9
2guz_B65 Mitochondrial import inner membrane translocase su 98.45
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Back     alignment and structure
Probab=99.83  E-value=1.1e-20  Score=146.69  Aligned_cols=69  Identities=55%  Similarity=0.946  Sum_probs=63.3

Q ss_pred             CCCCCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 048612            1 MVKETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGK   72 (385)
Q Consensus         1 m~~~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~   72 (385)
                      |+.+.+||+||||+++++.++||++||+++++||||++++.   .+.|+.|++||++|+||.+|..||.+|.
T Consensus         4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   72 (73)
T 2och_A            4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE   72 (73)
T ss_dssp             --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred             ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence            78899999999999999999999999999999999999754   5789999999999999999999999985
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Back     alignment and structure
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Back     alignment and structure
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Back     alignment and structure
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Back     alignment and structure
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Back     alignment and structure
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Back     alignment and structure
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Back     alignment and structure
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Back     alignment and structure
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Back     alignment and structure
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Back     alignment and structure
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Back     alignment and structure
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Back     alignment and structure
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Back     alignment and structure
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Back     alignment and structure
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Back     alignment and structure
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Back     alignment and structure
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Back     alignment and structure
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Back     alignment and structure
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Back     alignment and structure
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 385
d1xbla_75 a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain 6e-19
d1hdja_77 a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9 2e-17
d1wjza_94 a.2.3.1 (A:) CSL-type zinc finger-containing prote 9e-17
d1fpoa176 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma 9e-15
d1nz6a_98 a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T 2e-14
d1iura_88 a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human 2e-13
d1fafa_79 a.2.3.1 (A:) Large T antigen, the N-terminal J dom 2e-13
d1gh6a_114 a.2.3.1 (A:) Large T antigen, the N-terminal J dom 2e-10
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75 Back     information, alignment and structure

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 78.1 bits (192), Expect = 6e-19
 Identities = 33/66 (50%), Positives = 46/66 (69%)

Query: 7  YYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREA 66
          YY+ILGV+ +A E EIRKAY   A + HPD+N  D +A  +F+ + EAY+VL+D  +R A
Sbjct: 5  YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAA 64

Query: 67 YDKNGK 72
          YD+ G 
Sbjct: 65 YDQYGH 70
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77 Back     information, alignment and structure
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94 Back     information, alignment and structure
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76 Back     information, alignment and structure
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98 Back     information, alignment and structure
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88 Back     information, alignment and structure
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79 Back     information, alignment and structure
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query385
d1xbla_75 DnaJ chaperone, N-terminal (J) domain {Escherichia 99.88
d1hdja_77 HSP40 {Human (Homo sapiens) [TaxId: 9606]} 99.83
d1wjza_94 CSL-type zinc finger-containing protein 3 (J-domai 99.77
d1gh6a_114 Large T antigen, the N-terminal J domain {Simian v 99.75
d1fpoa176 HSC20 (HSCB), N-terminal (J) domain {Escherichia c 99.65
d1fafa_79 Large T antigen, the N-terminal J domain {Murine p 99.63
d1iura_88 Hypothetical protein KIAA0730 {Human (Homo sapiens 99.56
d1nz6a_98 Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} 99.52
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=3.6e-23  Score=160.09  Aligned_cols=72  Identities=46%  Similarity=0.780  Sum_probs=68.9

Q ss_pred             CCcchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCccc
Q 048612            4 ETEYYDILGVNPSASEEEIRKAYYLKARQVHPDKNPNDPQAAERFQVLGEAYQVLSDPFQREAYDKNGKYSI   75 (385)
Q Consensus         4 ~~dyY~iLgv~~~as~~eIkkaYrkla~~~HPDk~~~~~~a~~~f~~I~eAY~vLsd~~~R~~YD~~g~~~~   75 (385)
                      ..|||+||||+++||.++||+|||+++++||||++++++.+.+.|+.|++||+||+||.+|..||++|..++
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~   73 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF   73 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSC
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCcccc
Confidence            579999999999999999999999999999999999888899999999999999999999999999998765
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Back     information, alignment and structure
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Back     information, alignment and structure
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure