Citrus Sinensis ID: 048614

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-----
Protein Sequence
MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHccccccccccccccEEEEEcccccEEEEEEEEcccccEEEEEcccHHHHccccccccHHHHHHHHHHHHHHHccccccccEEEEEcccccEEEEEccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHcHHHHHHcccccccEEEEEEccccEEEEEEEEccccEEEEEccccEEEEccccccccHHHHHHHHHHHHHHHHHccccccEEEEccHHHEEEEEHccccHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccHHHHccc
Coil and Loop (DISEMBL)
maftefrplddkSLLEYIKatpslsskignkfdaltikevgdgnLNFVYIVVGSsgsfvikqalpyvrcigeswpmtkERAYFEALALKehgqlcpdhvpevyhfdrtmsligmrylepphiILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN
Flexible Loop (DISEMBL)
maftefrplddksLLEYIKAtpslsskignkFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN
Low Complexity Region (SEG)
MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN
Disordered region (IsUnstruct)
*************LLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT*******
Disordered Region (DISOPRED)
***TEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLY*********
Disordered Region (DISEMBL)
MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN
Disordered Region (DISPRO)
***TEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTT*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	165	2.2.26 [Sep-21-2011]
Q9C6D2	420	Methylthioribose kinase O	yes	no	0.993	0.390	0.789	1e-75
Q7XR61	430	Methylthioribose kinase 1	yes	no	0.963	0.369	0.761	1e-73
Q7XR60	427	Methylthioribose kinase 2	yes	no	0.963	0.372	0.742	2e-72
A7MKY0	399	Methylthioribose kinase O	yes	no	0.733	0.303	0.467	3e-27
A1JP08	399	Methylthioribose kinase O	yes	no	0.824	0.340	0.417	6e-27
A8ANI4	399	Methylthioribose kinase O	yes	no	0.896	0.370	0.4	8e-27
B1JIK2	407	Methylthioribose kinase O	yes	no	0.775	0.314	0.442	9e-27
A7FLL0	407	Methylthioribose kinase O	yes	no	0.775	0.314	0.442	1e-26
Q66E15	407	Methylthioribose kinase O	yes	no	0.775	0.314	0.442	1e-26
B2K634	407	Methylthioribose kinase O	yes	no	0.775	0.314	0.442	1e-26

>sp|Q9C6D2|MTK_ARATH Methylthioribose kinase OS=Arabidopsis thaliana GN=MTK PE=1 SV=1

 Score =  281 bits (720), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 131/166 (78%), Positives = 149/166 (89%), Gaps = 2/166 (1%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIG--NKFDALTIKEVGDGNLNFVYIVVGSSGSF 58
           M+F EF PL++KSL++YIK+TP+LSSKIG     D L IKEVGDGNLNFV+IVVGSSGS 
Sbjct: 1   MSFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSL 60

Query: 59  VIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLE 118
           VIKQALPY+RCIGESWPMTKERAYFEA  L++HG L PDHVPEVYHFDRTM+LIGMRYLE
Sbjct: 61  VIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLE 120

Query: 119 PPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
           PPHIILRKGLIAGI+YP LA+HMS++MAKTLF+TSLLY  TTEH+R
Sbjct: 121 PPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRR 166

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate in the methionine cycle. Contributes to the maintenance of AdoMet homeostasis and is required to sustain high rates of ethylene synthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 0EC: 0

>sp|Q7XR61|MTK1_ORYSJ Methylthioribose kinase 1 OS=Oryza sativa subsp. japonica GN=MTK1 PE=2 SV=1

 Score =  275 bits (702), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 121/159 (76%), Positives = 146/159 (91%)

Query: 6   FRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALP 65
           FRPLD+ SL+ YIKATP+L++++G   DALTIKEVGDGNLNFVYIV+  +GS VIKQALP
Sbjct: 16  FRPLDEASLVAYIKATPALAARLGGSLDALTIKEVGDGNLNFVYIVLSDAGSVVIKQALP 75

Query: 66  YVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILR 125
           Y+RC+G+SWPMT+ERAYFEA AL++H  LCPDHVPEVYHFDR MSLIGMRY+EPPHIILR
Sbjct: 76  YIRCVGDSWPMTRERAYFEASALQKHRGLCPDHVPEVYHFDRAMSLIGMRYIEPPHIILR 135

Query: 126 KGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
           KGLIAG++YPLLAEHM+++MAKTLF+TSLLY +TT+HK+
Sbjct: 136 KGLIAGVEYPLLAEHMADYMAKTLFFTSLLYNSTTDHKK 174

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q7XR60|MTK2_ORYSJ Methylthioribose kinase 2 OS=Oryza sativa subsp. japonica GN=MTK2 PE=2 SV=1

 Score =  271 bits (692), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 118/159 (74%), Positives = 146/159 (91%)

Query: 6   FRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALP 65
           FRPLD+ SL+ YIKATP+L++++G + DALTIKEVGDGNLNFVYIV+  +GS VIKQALP
Sbjct: 13  FRPLDEASLVAYIKATPALAARLGGRLDALTIKEVGDGNLNFVYIVLSDAGSLVIKQALP 72

Query: 66  YVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILR 125
           Y+R +G+SWPM++ERAYFEA AL++H  LCPDHVPEVYHFDR MSLIGMRY+EPPHIILR
Sbjct: 73  YIRLVGDSWPMSRERAYFEASALQKHRALCPDHVPEVYHFDRAMSLIGMRYIEPPHIILR 132

Query: 126 KGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
           KGL+AG++YPLLAEHM+++MAKTLF+TSLLY +TT+HK+
Sbjct: 133 KGLVAGVEYPLLAEHMADYMAKTLFFTSLLYNSTTDHKK 171

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|A7MKY0|MTNK_CROS8 Methylthioribose kinase OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=mtnK PE=3 SV=2

 Score =  120 bits (302), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 58/124 (46%), Positives = 81/124 (65%), Gaps = 3/124 (2%)

Query: 35  LTIKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHG 92
           ++ +EVGDGNLN V+ +    G    V+KQALPYVRC+GESWP+T +RA  EA  L  H 
Sbjct: 29  VSAQEVGDGNLNLVFKIFDKQGISRIVVKQALPYVRCVGESWPLTLDRARLEAQTLVAHY 88

Query: 93  QLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152
           Q CP H  +++H+D T++++ M  L   H I R  LI G+ YP  A  + E++A+TLF+T
Sbjct: 89  QHCPAHTVKIHHYDPTLAVMVMEDLS-DHRIWRGELIKGVHYPQAARQLGEYLAQTLFHT 147

Query: 153 SLLY 156
           S  Y
Sbjct: 148 SDFY 151

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Cronobacter sakazakii (strain ATCC BAA-894) (taxid: 290339)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|A1JP08|MTNK_YERE8 Methylthioribose kinase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=mtnK PE=3 SV=1

 Score =  120 bits (300), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 84/139 (60%), Gaps = 3/139 (2%)

Query: 27  KIGNKFDALTIKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFE 84
           +I +    +T  E+GDGNLN V+ +  ++G    ++KQALPYVRC+GESWP+T +RA  E
Sbjct: 21  QIADPLALVTADEIGDGNLNLVFKIRDAAGMSRVIVKQALPYVRCVGESWPLTLDRARIE 80

Query: 85  ALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEF 144
           A  L  HGQ CP H   V H D  ++++    L   H I R  L+ G  YP  A  ++E+
Sbjct: 81  AETLLTHGQFCPQHTVNVLHHDAELAVMVQEDL-SDHEIWRSELVKGKYYPQAAGQLAEY 139

Query: 145 MAKTLFYTSLLYRTTTEHK 163
           +A+TLF+TS  Y++    K
Sbjct: 140 LAQTLFHTSDFYQSAQAKK 158

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) (taxid: 393305)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|A8ANI4|MTNK_CITK8 Methylthioribose kinase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=mtnK PE=3 SV=2

 Score =  119 bits (298), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 91/155 (58%), Gaps = 7/155 (4%)

Query: 4   TEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG--SFVIK 61
           +++R    +  +EY +        I +    +  +EVGDGNLN V+ +  ++G    V+K
Sbjct: 2   SQYRTFTAQDAVEYARTF----GGIDDPSTLVEAQEVGDGNLNLVFKIFDTTGVSRIVVK 57

Query: 62  QALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPH 121
           QALPYVRC+GESWP+T +RA  EA  L  H Q CP H  +++HFD  ++++ M  L   H
Sbjct: 58  QALPYVRCVGESWPLTLDRARLEAQTLVAHYQHCPQHTVKIHHFDPELAVMVMEDL-SDH 116

Query: 122 IILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLY 156
            I R  LI G  YP  A  + E++A+TLF+TS  Y
Sbjct: 117 NIWRGELIKGAWYPQAARQLGEYLAQTLFHTSDFY 151

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) (taxid: 290338)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|B1JIK2|MTNK_YERPY Methylthioribose kinase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=mtnK PE=3 SV=1

 Score =  119 bits (298), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 3/131 (2%)

Query: 35  LTIKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHG 92
           +T  E+GDGNLN V+ +  ++G    ++KQALPYVRC+GESWP+T +RA  EA  L  H 
Sbjct: 29  VTADEIGDGNLNLVFKIRDTAGISRVIVKQALPYVRCVGESWPLTLDRARIEAETLLTHS 88

Query: 93  QLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152
           Q CP H  +V H D  ++++    L   H I R  LI G  YP  AE + E++A+TLF+T
Sbjct: 89  QFCPQHTVKVLHHDAELAVMVQEDLSDHH-IWRHELIQGNYYPQAAEQLGEYLAQTLFHT 147

Query: 153 SLLYRTTTEHK 163
           S  Y++    K
Sbjct: 148 SDFYQSAQAKK 158

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Yersinia pseudotuberculosis serotype O:3 (strain YPIII) (taxid: 502800)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|A7FLL0|MTNK_YERP3 Methylthioribose kinase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=mtnK PE=3 SV=1

 Score =  119 bits (298), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 3/131 (2%)

Query: 35  LTIKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHG 92
           +T  E+GDGNLN V+ +  ++G    ++KQALPYVRC+GESWP+T +RA  EA  L  H 
Sbjct: 29  VTADEIGDGNLNLVFKIRDTAGISRVIVKQALPYVRCVGESWPLTLDRARIEAETLLTHS 88

Query: 93  QLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152
           Q CP H  +V H D  ++++    L   H I R  LI G  YP  AE + E++A+TLF+T
Sbjct: 89  QFCPQHTVKVLHHDAELAVMVQEDLSDHH-IWRHELIQGNYYPQAAEQLGEYLAQTLFHT 147

Query: 153 SLLYRTTTEHK 163
           S  Y++    K
Sbjct: 148 SDFYQSAQAKK 158

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) (taxid: 349747)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q66E15|MTNK_YERPS Methylthioribose kinase OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=mtnK PE=3 SV=1

 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 3/131 (2%)

Query: 35  LTIKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHG 92
           +T  E+GDGNLN V+ +  ++G    ++KQALPYVRC+GESWP+T +RA  EA  L  H 
Sbjct: 29  VTADEIGDGNLNLVFKIRDTAGISRVIVKQALPYVRCVGESWPLTLDRARIEAETLLTHS 88

Query: 93  QLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152
           Q CP H  +V H D  ++++    L   H I R  LI G  YP  AE + E++A+TLF+T
Sbjct: 89  QFCPQHTVKVLHHDAELAVMVQEDLSDHH-IWRHELIQGNYYPQAAEQLGEYLAQTLFHT 147

Query: 153 SLLYRTTTEHK 163
           S  Y++    K
Sbjct: 148 SDFYQSAQAKK 158

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Yersinia pseudotuberculosis (taxid: 633)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|B2K634|MTNK_YERPB Methylthioribose kinase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=mtnK PE=3 SV=1

 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 3/131 (2%)

Query: 35  LTIKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHG 92
           +T  E+GDGNLN V+ +  ++G    ++KQALPYVRC+GESWP+T +RA  EA  L  H 
Sbjct: 29  VTADEIGDGNLNLVFKIRDTAGISRVIVKQALPYVRCVGESWPLTLDRARIEAETLLTHS 88

Query: 93  QLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152
           Q CP H  +V H D  ++++    L   H I R  LI G  YP  AE + E++A+TLF+T
Sbjct: 89  QFCPQHTVKVLHHDAELAVMVQEDLSDHH-IWRHELIQGNYYPQAAEQLGEYLAQTLFHT 147

Query: 153 SLLYRTTTEHK 163
           S  Y++    K
Sbjct: 148 SDFYQSAQAKK 158

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Yersinia pseudotuberculosis serotype IB (strain PB1/+) (taxid: 502801)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
452090896	417	5-methylthioribose kinase [Prunus persic	0.993	0.393	0.865	2e-82
224056200	418	predicted protein [Populus trichocarpa]	1.0	0.394	0.842	3e-79
225429289	419	PREDICTED: methylthioribose kinase [Viti	0.993	0.391	0.829	8e-78
255555259	424	Methylthioribose kinase, putative [Ricin	0.993	0.386	0.829	2e-77
449445914	418	PREDICTED: methylthioribose kinase-like	1.0	0.394	0.8	1e-76
356536154	417	PREDICTED: methylthioribose kinase-like	1.0	0.395	0.787	3e-76
255636278	417	unknown [Glycine max]	1.0	0.395	0.787	3e-76
388511143	241	unknown [Lotus japonicus]	1.0	0.684	0.787	4e-76
356575680	417	PREDICTED: methylthioribose kinase 1-lik	1.0	0.395	0.787	4e-76
255635020	417	unknown [Glycine max]	1.0	0.395	0.787	4e-76

>gi|452090896|gb|AGF95119.1| 5-methylthioribose kinase [Prunus persica]

 Score =  309 bits (792), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 142/164 (86%), Positives = 158/164 (96%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVI 60
           MAF+EFRPLD+K L+EYIKATPSLSSK+ NKFD LTIKEVGDGNLNFV+IVVGS+GSFVI
Sbjct: 1   MAFSEFRPLDEKVLIEYIKATPSLSSKLNNKFDNLTIKEVGDGNLNFVFIVVGSTGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPY+RCIGESWPMTKERAYFEALAL+EHG L PDHVPEVYHFDRTMSLIGMRYLEPP
Sbjct: 61  KQALPYIRCIGESWPMTKERAYFEALALREHGGLSPDHVPEVYHFDRTMSLIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
           HIILRKGLIAGI+YPLLA+HMS+++A+TLF+TSLLYR TT+HKR
Sbjct: 121 HIILRKGLIAGIEYPLLADHMSDYIARTLFFTSLLYRNTTDHKR 164

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056200|ref|XP_002298752.1| predicted protein [Populus trichocarpa] gi|222846010|gb|EEE83557.1| predicted protein [Populus trichocarpa]

 Score =  299 bits (765), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 139/165 (84%), Positives = 153/165 (92%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVI 60
           MAFTEFRPL +KSL+EYIKAT  LS KIGN F  L IKEVGDGNLNFVYIV   SGSFVI
Sbjct: 1   MAFTEFRPLAEKSLIEYIKATSVLSDKIGNNFGDLKIKEVGDGNLNFVYIVASPSGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPY+RCIGESWPMTKERAYFEALAL+EHG+LCP++VPEVYHFDRTMS+I MRYLEPP
Sbjct: 61  KQALPYIRCIGESWPMTKERAYFEALALREHGRLCPENVPEVYHFDRTMSVIAMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           HIILRKGLIAGI+YPLLAEHMS+++AKTL+YTSLLYRTTTEHKR+
Sbjct: 121 HIILRKGLIAGIEYPLLAEHMSDYIAKTLYYTSLLYRTTTEHKRD 165

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429289|ref|XP_002269154.1| PREDICTED: methylthioribose kinase [Vitis vinifera] gi|147818771|emb|CAN73920.1| hypothetical protein VITISV_028622 [Vitis vinifera] gi|296083117|emb|CBI22521.3| unnamed protein product [Vitis vinifera]

 Score =  294 bits (753), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 136/164 (82%), Positives = 149/164 (90%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVI 60
           MA + FRPLDDKSL+EYIKATP+LSSK+ N+ D L IKEVGDGNLNFVYIV+ SSGSFVI
Sbjct: 1   MASSGFRPLDDKSLIEYIKATPALSSKLANQLDGLQIKEVGDGNLNFVYIVISSSGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPY+RCIGESWPMTKERAYFEA AL+E  + C DHVPEVYHFDR M+LIGMRYLEPP
Sbjct: 61  KQALPYIRCIGESWPMTKERAYFEATALREQRRWCSDHVPEVYHFDREMALIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
           HIILRKGLIAGI+YPLLAEHMSEFMA+TLF+TSLLY  TTEHKR
Sbjct: 121 HIILRKGLIAGIEYPLLAEHMSEFMARTLFFTSLLYHDTTEHKR 164

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555259|ref|XP_002518666.1| Methylthioribose kinase, putative [Ricinus communis] gi|223542047|gb|EEF43591.1| Methylthioribose kinase, putative [Ricinus communis]

 Score =  292 bits (748), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 136/164 (82%), Positives = 150/164 (91%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVI 60
           MAF+EFRPLD+KSL+EYI+ TP L++KIG+KFD L IKEVGDGNLNFVYIVV S GSFVI
Sbjct: 1   MAFSEFRPLDEKSLIEYIRGTPVLANKIGDKFDDLKIKEVGDGNLNFVYIVVSSDGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPY+RCIGESWPMTKERAYFEA  LKEHG+LCP+HVP+VYHFD TM LIGMRYLEPP
Sbjct: 61  KQALPYIRCIGESWPMTKERAYFEARTLKEHGRLCPEHVPDVYHFDHTMCLIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
           HIILRKGLI G +YP LAEHMS++MAKTLFYTSLLY TTTEHKR
Sbjct: 121 HIILRKGLIGGHEYPHLAEHMSDYMAKTLFYTSLLYLTTTEHKR 164

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445914|ref|XP_004140717.1| PREDICTED: methylthioribose kinase-like [Cucumis sativus] gi|449486609|ref|XP_004157346.1| PREDICTED: methylthioribose kinase-like [Cucumis sativus]

 Score =  290 bits (743), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 132/165 (80%), Positives = 151/165 (91%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVI 60
           M F++FRPLD+ SL+EYIK  PSLS K+ NKFD + IKEVGDGNLNFVY+VVGSSGSFVI
Sbjct: 1   MDFSQFRPLDETSLIEYIKTVPSLSDKLDNKFDGIEIKEVGDGNLNFVYVVVGSSGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQA+PYVRCIGESWPMTKERAYFEA+AL++HG LCP+HVP VYHFDRTMSLIGMRYLEPP
Sbjct: 61  KQAIPYVRCIGESWPMTKERAYFEAVALRKHGHLCPNHVPNVYHFDRTMSLIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           HIILRKGLIAGI+YPLLA+H+SE+MAKTLF TS+LY +TT HK +
Sbjct: 121 HIILRKGLIAGIEYPLLADHISEYMAKTLFGTSILYNSTTVHKES 165

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536154|ref|XP_003536604.1| PREDICTED: methylthioribose kinase-like [Glycine max]

 Score =  289 bits (739), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 130/165 (78%), Positives = 154/165 (93%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVI 60
           M+ +EFRPLDDK L+EYIK+ P+LSSK+ + FD L++KEVGDGNLNFV+IV   +GSFVI
Sbjct: 1   MSLSEFRPLDDKFLIEYIKSVPALSSKLADNFDDLSVKEVGDGNLNFVFIVSNPAGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPYVRCIGESWPMTKERAYFE+LALKE G+L P+HVPEVYHFDRTMSLIGMRYLEPP
Sbjct: 61  KQALPYVRCIGESWPMTKERAYFESLALKEEGRLSPEHVPEVYHFDRTMSLIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           HIILRKGLIAGI+YPLLA+HM++FMAKTLF+TSLL+R+T++HKR+
Sbjct: 121 HIILRKGLIAGIEYPLLAQHMADFMAKTLFFTSLLFRSTSDHKRD 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255636278|gb|ACU18479.1| unknown [Glycine max]

 Score =  289 bits (739), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 130/165 (78%), Positives = 154/165 (93%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVI 60
           M+ +EFRPLDDK L+EYIK+ P+LSSK+ + FD L++KEVGDGNLNFV+IV   +GSFVI
Sbjct: 1   MSLSEFRPLDDKFLIEYIKSVPALSSKLADNFDDLSVKEVGDGNLNFVFIVSNPAGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPYVRCIGESWPMTKERAYFE+LALKE G+L P+HVPEVYHFDRTMSLIGMRYLEPP
Sbjct: 61  KQALPYVRCIGESWPMTKERAYFESLALKEEGRLSPEHVPEVYHFDRTMSLIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           HIILRKGLIAGI+YPLLA+HM++FMAKTLF+TSLL+R+T++HKR+
Sbjct: 121 HIILRKGLIAGIEYPLLAQHMADFMAKTLFFTSLLFRSTSDHKRD 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388511143|gb|AFK43633.1| unknown [Lotus japonicus]

 Score =  288 bits (738), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 130/165 (78%), Positives = 152/165 (92%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVI 60
           MAF+EFRPLDDKSL+EYIKA P+LSS +GN F  L++KEVGDGNLNFV+I++ SSGS VI
Sbjct: 1   MAFSEFRPLDDKSLIEYIKAVPALSSILGNNFSDLSVKEVGDGNLNFVFILLNSSGSLVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPYVRCIGESWPMTKERAYFE++ALKE  +LCP+HVP+VYHFDRTMSLI MRY+E P
Sbjct: 61  KQALPYVRCIGESWPMTKERAYFESMALKEESRLCPEHVPQVYHFDRTMSLIAMRYIESP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           HIILRKG IAGI+YPLLAEHM++FMAKTLF+TSLL+RTT +HKR+
Sbjct: 121 HIILRKGSIAGIEYPLLAEHMADFMAKTLFFTSLLFRTTADHKRD 165

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575680|ref|XP_003555966.1| PREDICTED: methylthioribose kinase 1-like [Glycine max]

 Score =  288 bits (738), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 130/165 (78%), Positives = 152/165 (92%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVI 60
           M+F+EFRPLDD SL+EYIK+ P+LSSK+ +  D L++KEVGDGNLNFV+IV   +GSFVI
Sbjct: 1   MSFSEFRPLDDTSLIEYIKSVPALSSKLADNLDDLSVKEVGDGNLNFVFIVSNPAGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPYVRCIGESWPMTKERAYFE+LALKE G+L P+HVPEVYHFDRTMSLIGMRYLEPP
Sbjct: 61  KQALPYVRCIGESWPMTKERAYFESLALKEEGRLIPEHVPEVYHFDRTMSLIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           HIILRKGLIAGI+YP LAEHM++FMAKTLF+TSLL+R+T +HKR+
Sbjct: 121 HIILRKGLIAGIEYPFLAEHMADFMAKTLFFTSLLFRSTADHKRD 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255635020|gb|ACU17868.1| unknown [Glycine max]

 Score =  288 bits (738), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 130/165 (78%), Positives = 152/165 (92%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVI 60
           M+F+EFRPLDD SL+EYIK+ P+LSSK+ +  D L++KEVGDGNLNFV+IV   +GSFVI
Sbjct: 1   MSFSEFRPLDDTSLIEYIKSVPALSSKLADNLDDLSVKEVGDGNLNFVFIVSNPAGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPYVRCIGESWPMTKERAYFE+LALKE G+L P+HVPEVYHFDRTMSLIGMRYLEPP
Sbjct: 61  KQALPYVRCIGESWPMTKERAYFESLALKEEGRLIPEHVPEVYHFDRTMSLIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           HIILRKGLIAGI+YP LAEHM++FMAKTLF+TSLL+R+T +HKR+
Sbjct: 121 HIILRKGLIAGIEYPFLAEHMADFMAKTLFFTSLLFRSTADHKRD 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
TAIR|locus:2007253	420	MTK "S-methyl-5-thioribose kin	0.993	0.390	0.795	6.3e-69
UNIPROTKB|Q7XR61	430	MTK1 "Methylthioribose kinase	0.963	0.369	0.761	4e-67
UNIPROTKB|Q81MJ5	393	mtnK "Methylthioribose kinase"	0.751	0.315	0.436	8.2e-23
TIGR_CMR|BA_4252	393	BA_4252 "5-methylthioribose ki	0.751	0.315	0.436	8.2e-23
UNIPROTKB|Q81ZC3	409	mtnK "Methylthioribose kinase"	0.921	0.371	0.325	4.9e-12
TIGR_CMR|BA_0346	409	BA_0346 "5-methylthioribose ki	0.921	0.371	0.325	4.9e-12

TAIR|locus:2007253 MTK "S-methyl-5-thioribose kinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
 Identities = 132/166 (79%), Positives = 151/166 (90%)

Query:     1 MAFTEFRPLDDKSLLEYIKATPSLSSKIG-NKFDA-LTIKEVGDGNLNFVYIVVGSSGSF 58
             M+F EF PL++KSL++YIK+TP+LSSKIG +K D  L IKEVGDGNLNFV+IVVGSSGS 
Sbjct:     1 MSFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSL 60

Query:    59 VIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLE 118
             VIKQALPY+RCIGESWPMTKERAYFEA  L++HG L PDHVPEVYHFDRTM+LIGMRYLE
Sbjct:    61 VIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLE 120

Query:   119 PPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
             PPHIILRKGLIAGI+YP LA+HMS++MAKTLF+TSLLY  TTEH+R
Sbjct:   121 PPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRR 166

GO:0009086 "methionine biosynthetic process" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046522 "S-methyl-5-thioribose kinase activity" evidence=IEA;ISS;IDA;IMP

GO:0019509 "L-methionine salvage from methylthioadenosine" evidence=TAS

GO:0042802 "identical protein binding" evidence=IPI

GO:0071281 "cellular response to iron ion" evidence=IEP

GO:0071369 "cellular response to ethylene stimulus" evidence=IEP

GO:0071732 "cellular response to nitric oxide" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

UNIPROTKB|Q7XR61 MTK1 "Methylthioribose kinase 1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
 Identities = 121/159 (76%), Positives = 146/159 (91%)

Query:     6 FRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALP 65
             FRPLD+ SL+ YIKATP+L++++G   DALTIKEVGDGNLNFVYIV+  +GS VIKQALP
Sbjct:    16 FRPLDEASLVAYIKATPALAARLGGSLDALTIKEVGDGNLNFVYIVLSDAGSVVIKQALP 75

Query:    66 YVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILR 125
             Y+RC+G+SWPMT+ERAYFEA AL++H  LCPDHVPEVYHFDR MSLIGMRY+EPPHIILR
Sbjct:    76 YIRCVGDSWPMTRERAYFEASALQKHRGLCPDHVPEVYHFDRAMSLIGMRYIEPPHIILR 135

Query:   126 KGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
             KGLIAG++YPLLAEHM+++MAKTLF+TSLLY +TT+HK+
Sbjct:   136 KGLIAGVEYPLLAEHMADYMAKTLFFTSLLYNSTTDHKK 174

GO:0046522 "S-methyl-5-thioribose kinase activity" evidence=IDA

UNIPROTKB|Q81MJ5 mtnK "Methylthioribose kinase" [Bacillus anthracis (taxid:1392)]

 Score = 264 (98.0 bits), Expect = 8.2e-23, P = 8.2e-23
 Identities = 55/126 (43%), Positives = 81/126 (64%)

Query:    39 EVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDH 98
             E+GDGNLN+V+ +     S +IKQALPY + +GESWP++ +RA  E+ AL+   +  P++
Sbjct:    31 EIGDGNLNYVFKLDDGEKSIIIKQALPYAKVVGESWPLSIKRATIESKALQIFAKYVPEY 90

Query:    99 VPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT 158
             VP VY  D  +++  +  L     I RKGLI G +YPLL++H+  F+A  LFYTS  +  
Sbjct:    91 VPVVYSHDEELAVTVIEDLSRL-TITRKGLIDGEEYPLLSQHIGRFLANVLFYTSD-FGL 148

Query:   159 TTEHKR 164
              +E KR
Sbjct:   149 QSEEKR 154

GO:0009086 "methionine biosynthetic process" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

TIGR_CMR|BA_4252 BA_4252 "5-methylthioribose kinase, putative" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 264 (98.0 bits), Expect = 8.2e-23, P = 8.2e-23
 Identities = 55/126 (43%), Positives = 81/126 (64%)

Query:    39 EVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDH 98
             E+GDGNLN+V+ +     S +IKQALPY + +GESWP++ +RA  E+ AL+   +  P++
Sbjct:    31 EIGDGNLNYVFKLDDGEKSIIIKQALPYAKVVGESWPLSIKRATIESKALQIFAKYVPEY 90

Query:    99 VPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT 158
             VP VY  D  +++  +  L     I RKGLI G +YPLL++H+  F+A  LFYTS  +  
Sbjct:    91 VPVVYSHDEELAVTVIEDLSRL-TITRKGLIDGEEYPLLSQHIGRFLANVLFYTSD-FGL 148

Query:   159 TTEHKR 164
              +E KR
Sbjct:   149 QSEEKR 154

GO:0009086 "methionine biosynthetic process" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

UNIPROTKB|Q81ZC3 mtnK "Methylthioribose kinase" [Bacillus anthracis (taxid:1392)]

 Score = 169 (64.5 bits), Expect = 4.9e-12, P = 4.9e-12
 Identities = 54/166 (32%), Positives = 83/166 (50%)

Query:     3 FTEFRPLDDKSLLEYIKATPSLSSKIGNKFD---ALTIKEVGDGNLNFVYIVVGSSG--S 57
             FT++  ++   ++ Y+K       K+  KF+    L  KE+GDGNLN+V+ V       S
Sbjct:     4 FTKYFLMEANDVIVYVK------EKLC-KFEHAKGLQCKEIGDGNLNYVFRVWDEQKNIS 56

Query:    58 FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYL 117
              ++KQA    R I + + ++  R   E+  L+   +L P  VP+VY FD  M+   M  L
Sbjct:    57 VIVKQAGDTAR-ISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDSVMNCCVMEDL 115

Query:   118 EPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHK 163
                H ILR  LI    +P LA+ ++ F+  TL  TS +     E K
Sbjct:   116 SD-HTILRTALINHEIFPRLADDLTTFLVNTLLLTSDVVMNHKEKK 160

GO:0009086 "methionine biosynthetic process" evidence=ISS

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=ISS

TIGR_CMR|BA_0346 BA_0346 "5-methylthioribose kinase, putative" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 169 (64.5 bits), Expect = 4.9e-12, P = 4.9e-12
 Identities = 54/166 (32%), Positives = 83/166 (50%)

Query:     3 FTEFRPLDDKSLLEYIKATPSLSSKIGNKFD---ALTIKEVGDGNLNFVYIVVGSSG--S 57
             FT++  ++   ++ Y+K       K+  KF+    L  KE+GDGNLN+V+ V       S
Sbjct:     4 FTKYFLMEANDVIVYVK------EKLC-KFEHAKGLQCKEIGDGNLNYVFRVWDEQKNIS 56

Query:    58 FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYL 117
              ++KQA    R I + + ++  R   E+  L+   +L P  VP+VY FD  M+   M  L
Sbjct:    57 VIVKQAGDTAR-ISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDSVMNCCVMEDL 115

Query:   118 EPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHK 163
                H ILR  LI    +P LA+ ++ F+  TL  TS +     E K
Sbjct:   116 SD-HTILRTALINHEIFPRLADDLTTFLVNTLLLTSDVVMNHKEKK 160


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.139   0.414    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      165       165   0.00093  107 3  11 22  0.49    31
                                                     30  0.45    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  597 (63 KB)
  Total size of DFA:  149 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.55u 0.10s 15.65t   Elapsed:  00:00:01
  Total cpu time:  15.55u 0.10s 15.65t   Elapsed:  00:00:01
  Start:  Sat May 11 10:07:22 2013   End:  Sat May 11 10:07:23 2013

GO:0009086 "methionine biosynthetic process" evidence=ISS

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9C6D2	MTK_ARATH	2, ., 7, ., 1, ., 1, 0, 0	0.7891	0.9939	0.3904	yes	no
Q7XR60	MTK2_ORYSJ	2, ., 7, ., 1, ., 1, 0, 0	0.7421	0.9636	0.3723	yes	no
Q7XR61	MTK1_ORYSJ	2, ., 7, ., 1, ., 1, 0, 0	0.7610	0.9636	0.3697	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.1.100	0.824
3rd Layer	2.7.1	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pm.C_LG_I001056	S-methyl-5-thioribose kinase (EC-2.7.1.100) (418 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pm.C_LG_VI0635	hypothetical protein (384 aa)	•	•	•			•	•		0.963
	eugene3.121520001	Predicted protein (251 aa)						•	•		0.592

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	165
PLN02756	418	PLN02756, PLN02756, S-methyl-5-thioribose kinase	1e-122
PRK09550	401	PRK09550, mtnK, methylthioribose kinase; Reviewed	9e-71
COG4857	408	COG4857, COG4857, Predicted kinase [General functi	2e-47
TIGR01767	370	TIGR01767, MTRK, 5-methylthioribose kinase	5e-47
PRK12396	409	PRK12396, PRK12396, 5-methylribose kinase; Reviewe	2e-21
pfam01636	238	pfam01636, APH, Phosphotransferase enzyme family	0.001

>gnl|CDD|166397 PLN02756, PLN02756, S-methyl-5-thioribose kinase

 Score =  350 bits (899), Expect = e-122
 Identities = 144/165 (87%), Positives = 156/165 (94%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVI 60
           MAF+EFRPLD+KSL+EYIKATP+LSSKIGN  D L IKEVGDGNLNFVYIVV SSGSFVI
Sbjct: 1   MAFSEFRPLDEKSLVEYIKATPALSSKIGNDLDDLKIKEVGDGNLNFVYIVVSSSGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPY+RCIGESWPMTKERAYFEA AL+EHG+LCPDHVPEVYHFDRTM+LIGMRYLEPP
Sbjct: 61  KQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRTMALIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           HIILRKGLIAGI+YPLLAEHMS++MAKTLF+TSLLY  TTEHKR 
Sbjct: 121 HIILRKGLIAGIEYPLLAEHMSDYMAKTLFFTSLLYHDTTEHKRA 165

Length = 418

>gnl|CDD|236561 PRK09550, mtnK, methylthioribose kinase; Reviewed

 Score =  218 bits (557), Expect = 9e-71
 Identities = 75/165 (45%), Positives = 102/165 (61%), Gaps = 7/165 (4%)

Query: 3   FTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG--SFVI 60
            + +  L ++  +EY      L   + +    LT +E+GDGNLN V+ V  + G  S ++
Sbjct: 1   MSGYETLTEEDAVEYAA----LKLGLFDPKALLTAREIGDGNLNLVFRVSDTEGGKSVIV 56

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPYVR +GESWP+T +RA  EA ALK   +  PD VP+VYH+D  +++  M  L   
Sbjct: 57  KQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEELAVTVMEDLS-D 115

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           H ILRKGLI G KYP LAEH+ EF+A+TLFYTS    ++ E K  
Sbjct: 116 HKILRKGLIDGKKYPKLAEHIGEFLARTLFYTSDFGLSSEEKKAL 160

Length = 401

>gnl|CDD|227194 COG4857, COG4857, Predicted kinase [General function prediction only]

 Score =  158 bits (401), Expect = 2e-47
 Identities = 70/162 (43%), Positives = 99/162 (61%), Gaps = 5/162 (3%)

Query: 6   FRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG--SFVIKQA 63
           F  L D++L   +    +L+ KIG     LT+KE+GDGNLN+V+IV G  G  + ++KQA
Sbjct: 6   FEALSDETLSYGVNV--ALNLKIGPNKSHLTVKEIGDGNLNYVFIVEGKIGGKAAIVKQA 63

Query: 64  LPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHII 123
           LPYVR +GESWP+  +R++ E  AL+      P  VPE+Y FD  M++I M  L  PH I
Sbjct: 64  LPYVRLVGESWPLPLKRSFIEYHALRRQNARAPHFVPEIYFFDEIMAVIVMEDLS-PHKI 122

Query: 124 LRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           LR+ LI G   P + + + EF+A+TLF  S L   T + K +
Sbjct: 123 LRRALIDGRILPNIVDDIGEFLARTLFRGSDLSMNTKDKKAD 164

Length = 408

>gnl|CDD|130828 TIGR01767, MTRK, 5-methylthioribose kinase

 Score =  156 bits (396), Expect = 5e-47
 Identities = 63/128 (49%), Positives = 80/128 (62%), Gaps = 3/128 (2%)

Query: 38  KEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLC 95
           +EVGDGNLN V+ V    G  + ++KQALPYVR +GESWP+T +RA  E+ AL   G+  
Sbjct: 1   QEVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHV 60

Query: 96  PDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL 155
           P  VP ++HFD  M++  M  L   H I RKGLI G  YP LA H+ EF+AKTLFY+S  
Sbjct: 61  PHLVPRIFHFDTEMAVTVMEDLS-HHKIARKGLIEGENYPHLARHIGEFLAKTLFYSSDY 119

Query: 156 YRTTTEHK 163
                  K
Sbjct: 120 ALEPKVKK 127

This enzyme is involved in the methionine salvage pathway in certain bacteria. Length = 370

>gnl|CDD|183499 PRK12396, PRK12396, 5-methylribose kinase; Reviewed

 Score = 88.7 bits (220), Expect = 2e-21
 Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 4/121 (3%)

Query: 35  LTIKEVGDGNLNFVYIV--VGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHG 92
           L  KE+GDGNLN+V+ V     + S ++KQA    R I + + ++  R   E+  L+   
Sbjct: 32  LQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTAR-ISDEFKLSTNRIRIESDVLQLEE 90

Query: 93  QLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152
           +L P  VP+VY FD  M+   M  L   H ILR  LI    +P LA+ ++ F+  TL  T
Sbjct: 91  ELAPGLVPKVYLFDSVMNCCVMEDLSD-HTILRTALINHEIFPRLADDLTTFLVNTLLLT 149

Query: 153 S 153
           S
Sbjct: 150 S 150

Length = 409

>gnl|CDD|216618 pfam01636, APH, Phosphotransferase enzyme family

 Score = 37.5 bits (87), Expect = 0.001
 Identities = 18/82 (21%), Positives = 27/82 (32%), Gaps = 10/82 (12%)

Query: 36  TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLC 95
           T++ +  G  N  Y+V    G +V+K A P              R       L   G   
Sbjct: 1   TLRPLSGGASNRTYLVGTGDGRYVLKLAPP------AEAAEELRRELALLRHLAAAG--- 51

Query: 96  PDHVPEVYHFDRTMSLIGMRYL 117
              VP V         +G+ +L
Sbjct: 52  -IPVPRVLAGGTDGGGLGLPFL 72

This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881. Length = 238

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	165
PRK12396	409	5-methylribose kinase; Reviewed	100.0
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	100.0
PRK09550	401	mtnK methylthioribose kinase; Reviewed	100.0
PLN02756	418	S-methyl-5-thioribose kinase	100.0
COG4857	408	Predicted kinase [General function prediction only	100.0
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.28
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.15
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.1
KOG3087	229	consensus Serine/threonine protein kinase [General	98.95
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.91
PF01636	239	APH: Phosphotransferase enzyme family This family	98.8
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.74
PRK05231	319	homoserine kinase; Provisional	98.71
PRK14879	211	serine/threonine protein kinase; Provisional	98.71
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	98.7
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	98.68
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.67
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	98.66
PLN02876	822	acyl-CoA dehydrogenase	98.63
PRK10593	297	hypothetical protein; Provisional	98.61
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	98.59
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	98.56
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	98.53
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.41
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.4
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.35
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	98.3
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	98.19
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.14
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.13
PLN02236	344	choline kinase	98.02
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	97.97
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.95
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	97.93
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.87
COG2334	331	Putative homoserine kinase type II (protein kinase	97.83
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	97.78
PTZ00384	383	choline kinase; Provisional	97.72
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	97.7
PRK11768	325	serine/threonine protein kinase; Provisional	97.63
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.62
PRK09902	216	hypothetical protein; Provisional	97.58
PRK06148	1013	hypothetical protein; Provisional	97.56
smart00090	237	RIO RIO-like kinase.	97.5
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	97.44
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	97.43
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	97.4
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	97.34
PTZ00296	442	choline kinase; Provisional	97.32
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.24
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.23
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	97.11
PRK06149	972	hypothetical protein; Provisional	97.09
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	97.04
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	96.94
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	96.91
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	96.87
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	96.85
PRK09188	365	serine/threonine protein kinase; Provisional	96.85
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	96.83
PRK12274	218	serine/threonine protein kinase; Provisional	96.83
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	96.83
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	96.82
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	96.77
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	96.75
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	96.74
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	96.71
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	96.65
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	96.65
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	96.64
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	96.62
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	96.59
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	96.58
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	96.56
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	96.56
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	96.56
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	96.55
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	96.54
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	96.54
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	96.5
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	96.48
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	96.48
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	96.48
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	96.44
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	96.43
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	96.43
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	96.42
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	96.41
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	96.41
PTZ00263	329	protein kinase A catalytic subunit; Provisional	96.41
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	96.4
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	96.39
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	96.37
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	96.37
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	96.37
PHA02988	283	hypothetical protein; Provisional	96.36
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	96.34
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	96.34
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	96.34
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	96.32
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	96.32
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	96.31
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	96.29
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	96.29
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	96.28
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	96.27
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	96.25
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	96.25
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	96.24
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	96.23
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	96.22
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	96.22
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	96.21
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	96.2
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	96.19
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	96.18
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	96.17
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	96.17
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	96.17
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	96.13
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	96.12
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	96.11
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	96.1
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	96.09
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	96.06
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	96.05
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	96.04
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	96.03
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	96.03
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	96.02
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	96.01
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	95.99
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	95.97
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	95.96
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	95.95
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	95.94
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	95.92
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	95.88
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	95.86
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	95.85
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	95.84
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	95.82
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	95.82
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	95.81
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	95.79
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	95.79
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	95.79
KOG0610	459	consensus Putative serine/threonine protein kinase	95.78
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	95.78
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	95.77
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	95.77
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	95.75
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	95.73
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	95.72
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	95.72
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	95.71
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	95.71
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	95.7
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	95.7
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	95.69
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	95.68
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	95.67
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	95.66
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	95.65
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	95.64
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	95.63
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	95.61
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	95.6
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	95.6
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	95.59
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	95.59
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	95.59
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	95.58
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	95.58
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	95.58
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	95.58
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	95.58
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	95.58
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	95.57
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	95.57
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	95.56
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	95.56
COG0478	304	RIO-like serine/threonine protein kinase fused to	95.56
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	95.55
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	95.54
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	95.54
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	95.54
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	95.53
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	95.48
PLN00009	294	cyclin-dependent kinase A; Provisional	95.47
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	95.46
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	95.45
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	95.43
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	95.42
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	95.41
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	95.4
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	95.4
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	95.39
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	95.39
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	95.37
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	95.34
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	95.33
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	95.33
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	95.32
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	95.32
PHA03212	391	serine/threonine kinase US3; Provisional	95.31
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	95.29
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	95.29
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	95.28
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	95.26
KOG3021	313	consensus Predicted kinase [General function predi	95.25
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	95.25
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	95.23
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	95.22
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	95.19
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	95.19
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	95.17
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	95.16
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	95.16
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	95.16
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	95.15
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	95.15
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	95.13
PLN00034	353	mitogen-activated protein kinase kinase; Provision	95.13
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	95.12
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	95.11
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	95.11
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	95.1
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	95.09
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	95.07
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	95.03
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	95.03
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	95.01
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	95.01
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	95.01
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	95.01
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	94.99
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	94.98
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	94.98
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	94.97
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	94.96
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	94.96
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	94.95
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	94.93
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	94.92
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	94.89
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	94.88
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	94.88
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	94.84
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	94.83
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	94.82
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	94.81
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	94.81
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	94.8
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	94.79
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	94.78
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	94.77
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	94.73
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	94.71
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	94.67
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	94.65
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	94.65
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	94.64
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	94.63
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	94.63
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	94.6
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	94.58
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	94.57
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	94.53
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	94.49
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	94.48
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	94.46
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	94.42
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	94.36
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	94.36
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	94.33
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	94.33
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	94.27
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	94.26
PHA03211	461	serine/threonine kinase US3; Provisional	94.24
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	94.23
KOG0605	550	consensus NDR and related serine/threonine kinases	94.21
PTZ00024	335	cyclin-dependent protein kinase; Provisional	94.19
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	94.19
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	94.18
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	94.17
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	94.16
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	94.16
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	94.15
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	94.15
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	94.09
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	94.06
PTZ00284	467	protein kinase; Provisional	94.05
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	94.04
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	93.99
PHA03209	357	serine/threonine kinase US3; Provisional	93.96
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	93.96
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	93.93
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	93.91
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	93.87
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	93.86
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	93.83
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	93.83
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	93.77
PF07914	414	DUF1679: Protein of unknown function (DUF1679); In	93.77
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	93.73
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	93.7
PRK10345	210	hypothetical protein; Provisional	93.69
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	93.68
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	93.66
PTZ00266	1021	NIMA-related protein kinase; Provisional	93.63
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	93.61
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	93.59
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	93.58
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	93.55
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	93.5
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	93.37
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	93.36
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	93.31
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	93.3
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	93.21
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	93.2
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	93.15
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	93.13
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	93.12
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	92.99
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	92.94
KOG1187	361	consensus Serine/threonine protein kinase [Signal	92.94
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	92.94
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	92.89
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	92.89
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	92.88
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	92.83
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	92.8
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	92.76
KOG0595	429	consensus Serine/threonine-protein kinase involved	92.58
KOG1235	538	consensus Predicted unusual protein kinase [Genera	92.55
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	92.42
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	92.42
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	92.42
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	92.39
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	92.39
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	92.3
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	92.29
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	92.29
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	92.26
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	92.25
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	92.21
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	92.19
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	92.1
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	92.06
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	92.05
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	91.99
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	91.89
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	91.83
PTZ00267	478	NIMA-related protein kinase; Provisional	91.81
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	91.76
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	91.75
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	91.58
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	91.55
KOG0583	370	consensus Serine/threonine protein kinase [Signal	91.19
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	91.09
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	90.93
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	90.45
cd05124	238	AFK Actin-Fragmin Kinase (AFK); catalytic domain.	90.38
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	90.26
PTZ00036	440	glycogen synthase kinase; Provisional	90.21
KOG0192	362	consensus Tyrosine kinase specific for activated (	90.02
PHA03207	392	serine/threonine kinase US3; Provisional	89.82
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	89.62
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	89.58
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	89.51
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	89.38
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	89.3
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	89.27
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	89.12
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	88.36
PTZ00283	496	serine/threonine protein kinase; Provisional	88.04
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	87.93
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	87.87
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	86.45
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	86.32
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	86.19
COG0661	517	AarF Predicted unusual protein kinase [General fun	85.32
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	84.85
KOG4720	391	consensus Ethanolamine kinase [Lipid transport and	84.43
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	83.68
KOG0198	313	consensus MEKK and related serine/threonine protei	82.99
PLN03224	507	probable serine/threonine protein kinase; Provisio	82.65
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	82.4
KOG2686	366	consensus Choline kinase [Cell wall/membrane/envel	82.2
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	81.99
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	80.05

>PRK12396 5-methylribose kinase; Reviewed

Probab=100.00  E-value=1.7e-48  Score=337.95  Aligned_cols=156  Identities=32%  Similarity=0.511  Sum_probs=146.9

Q ss_pred             CCCCccccCHhhHHHHHHhC-CCcccccCCCCCcceeEecCCCceeEEEEEEeC--CCeEEEeecCccccccCCCCCCCh
Q 048614            2 AFTEFRPLDDKSLLEYIKAT-PSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGS--SGSFVIKQALPYVRCIGESWPMTK   78 (165)
Q Consensus         2 ~~~~~~~l~~~~v~~Yl~~~-~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~--~gsvIvKqa~p~~r~~~~~~~l~~   78 (165)
                      .|..|++||++++++|++++ +.++     ..++++++++||||+|+||||.+.  ++|||||||+||+|+ +++||+|+
T Consensus         3 ~~~~y~~l~~~~v~~yl~~~l~~~~-----~~~~~~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv-~~swpL~~   76 (409)
T PRK12396          3 KFTKYFLMEANDVIVYVKEKLSKFE-----HAKGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARI-SDEFKLST   76 (409)
T ss_pred             ccccceeCCHhHHHHHHHHhcCCCC-----CcccceeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhcc-CCCCCCCh
Confidence            35699999999999999985 7554     567899999999999999999986  349999999999995 79999999


Q ss_pred             HHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccC
Q 048614           79 ERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT  158 (165)
Q Consensus        79 ~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~  158 (165)
                      +|+++|+++|+.+++++|++||+||+||++++++|||||+ ++.+||++|++|+.+|.+|++||+|||++||+||||+|+
T Consensus        77 ~R~~~E~~aL~~~~~~~P~~VP~vy~~D~e~~~~vMEdL~-~~~ilR~~Li~G~~~p~~A~~ig~fla~tlf~tSd~~l~  155 (409)
T PRK12396         77 NRIRIESDVLQLEEELAPGLVPKVYLFDSVMNCCVMEDLS-DHTILRTALINHEIFPRLADDLTTFLVNTLLLTSDVVMN  155 (409)
T ss_pred             HHHHHHHHHHHHHHhhCCCcCCeEEEECcHHhhHHHHhCc-ccHHHHHHHHcCCcChhHHHHHHHHHHHHHhhcchhccC
Confidence            9999999999999999999999999999999999999999 699999999999999999999999999999999999999


Q ss_pred             chhhhc
Q 048614          159 TTEHKR  164 (165)
Q Consensus       159 ~~~~k~  164 (165)
                      +++||+
T Consensus       156 ~~~kk~  161 (409)
T PRK12396        156 HKEKKE  161 (409)
T ss_pred             hHHHHH
Confidence            999996

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=100.00  E-value=1.1e-41  Score=292.65  Aligned_cols=126  Identities=50%  Similarity=0.826  Sum_probs=121.3

Q ss_pred             EecCCCceeEEEEEEeCCC--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 048614           38 KEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMR  115 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vME  115 (165)
                      +|+||||+|+||||.+++|  |||||||+||+|+++++||++++|+++|+++|+.+++++|+.||++|+||++++++|||
T Consensus         1 ~EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e~~~~vME   80 (370)
T TIGR01767         1 QEVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTEMAVTVME   80 (370)
T ss_pred             CcCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEccccceehHh
Confidence            4789999999999998864  89999999999988889999999999999999999999999999999999999999999


Q ss_pred             cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCchhhhc
Q 048614          116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR  164 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~~~k~  164 (165)
                      ||+ ++.+||++|++|+.+|.+|++||+|||+|||+|||++|++++||+
T Consensus        81 dL~-~~~ilR~~Li~g~~~p~~A~~iG~~La~tlf~tsd~~~~~~~kk~  128 (370)
T TIGR01767        81 DLS-HHKIARKGLIEGENYPHLARHIGEFLAKTLFYSSDYALEPKVKKA  128 (370)
T ss_pred             hCc-cchHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcccccCHHHHHH
Confidence            999 699999999999999999999999999999999999999988885

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=100.00  E-value=6e-40  Score=285.42  Aligned_cols=156  Identities=47%  Similarity=0.781  Sum_probs=146.3

Q ss_pred             CCCccccCHhhHHHHHHh-CCCcccccCCCCCcceeEecCCCceeEEEEEEeCCC--eEEEeecCccccccCCCCCCChH
Q 048614            3 FTEFRPLDDKSLLEYIKA-TPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKE   79 (165)
Q Consensus         3 ~~~~~~l~~~~v~~Yl~~-~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~   79 (165)
                      +++|++||+++|++||+. .+.+.     +.++++++++||||+|+||||++.+|  ++|||||+||+|+++++|+++.+
T Consensus         1 ~~~y~~l~~~~v~~yl~~~~~~~~-----~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~e   75 (401)
T PRK09550          1 MSGYETLTEEDAVEYAALKLGLFD-----PKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLD   75 (401)
T ss_pred             CCCCeeCCHhHHHHHHHHhcCCCC-----CcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHH
Confidence            578999999999999954 46553     56788999999999999999999876  89999999999998888999999


Q ss_pred             HHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCc
Q 048614           80 RAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTT  159 (165)
Q Consensus        80 R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~  159 (165)
                      |+++|+++|+.+++.+|..||++|+||++++++|||||+ ++.+||++|++|+.+|.+|++||++||++||+|||++|++
T Consensus        76 R~~~Eae~L~~l~~~~p~~VPkV~~~D~~~~~lVME~L~-~~~~lr~~Ll~g~~~p~~a~~iG~~LA~~~f~tsd~~~~~  154 (401)
T PRK09550         76 RARIEAEALKIQAKYVPDLVPKVYHYDEELAVTVMEDLS-DHKILRKGLIDGKKYPKLAEHIGEFLARTLFYTSDFGLSS  154 (401)
T ss_pred             HHHHHHHHHHHHHhhCCCCCCeEEEECCCCCEEEEecCC-CccHHHHHHhcCCccHHHHHHHHHHHHHHHhccchhhcCh
Confidence            999999999999999999999999999999999999999 6999999999999999999999999999999999999999


Q ss_pred             hhhhc
Q 048614          160 TEHKR  164 (165)
Q Consensus       160 ~~~k~  164 (165)
                      ++||+
T Consensus       155 ~~~~~  159 (401)
T PRK09550        155 EEKKA  159 (401)
T ss_pred             hhhhh
Confidence            98774

>PLN02756 S-methyl-5-thioribose kinase

Probab=100.00  E-value=7.5e-40  Score=285.11  Aligned_cols=164  Identities=88%  Similarity=1.427  Sum_probs=154.0

Q ss_pred             CCCCCccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHH
Q 048614            1 MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKER   80 (165)
Q Consensus         1 ~~~~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R   80 (165)
                      |.|..|++|+.+++.+|+++++.+.+.++...+.++++++||||+|+||||+++++++||||++|++|+++++||++.+|
T Consensus         1 ~~~~~y~~l~~~~l~~yl~~~~~~~~~l~g~~~~l~~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R   80 (418)
T PLN02756          1 MAFSEFRPLDEKSLVEYIKATPALSSKIGNDLDDLKIKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKER   80 (418)
T ss_pred             CCccccccCCHHHHHHHHHHccchhhhcCCCCCCceEEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccH
Confidence            67899999999999999999877765555555678999999999999999998766999999999999888999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCch
Q 048614           81 AYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTT  160 (165)
Q Consensus        81 ~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~  160 (165)
                      .++|+++|+..++++|..||++|+||+++++++||||++++.+||+.|++|..+|.++++||++||+++|+||||+|+++
T Consensus        81 ~~~Ea~aL~~~~~~~p~~VPkVy~~ded~~vlvME~L~~~~~ilr~~Ll~G~~~p~~a~~ig~~la~tLf~tSd~~~~~~  160 (418)
T PLN02756         81 AYFEATALREHGRLCPDHVPEVYHFDRTMALIGMRYLEPPHIILRKGLIAGIEYPLLAEHMSDYMAKTLFFTSLLYHDTT  160 (418)
T ss_pred             HHHHHHHHHHhhhcCCCCCCeEEEECCCCCEEEEeecCCcceehhhhhccCCCCHHHHHHHHHHHHHHHhhcchhccChh
Confidence            99999999999999999999999999999999999998458999999999999999999999999999999999999999


Q ss_pred             hhhc
Q 048614          161 EHKR  164 (165)
Q Consensus       161 ~~k~  164 (165)
                      +||+
T Consensus       161 ~kk~  164 (418)
T PLN02756        161 EHKR  164 (418)
T ss_pred             hhhH
Confidence            9986

>COG4857 Predicted kinase [General function prediction only]

Probab=100.00  E-value=2.1e-40  Score=275.88  Aligned_cols=138  Identities=47%  Similarity=0.814  Sum_probs=132.1

Q ss_pred             ccCCCCCcceeEecCCCceeEEEEEEeCCC--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614           27 KIGNKFDALTIKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH  104 (165)
Q Consensus        27 ~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      .+|+....|+|+++||||+||||.|.+..|  +.|||||+||+|++|.+||+|..|.++|+.+|+..++.+|..||++|+
T Consensus        25 k~G~~~s~ltvkEIGDGNlNyvF~V~~~~~~ka~ivKQA~py~r~vGeswPL~l~Rs~iE~~aL~rq~~~aPh~VPeIyf  104 (408)
T COG4857          25 KIGPNKSHLTVKEIGDGNLNYVFIVEGKIGGKAAIVKQALPYVRLVGESWPLPLKRSFIEYHALRRQNARAPHFVPEIYF  104 (408)
T ss_pred             HhCCCccceEEEEecCCceeEEEEEecCCCCeehhhhhhhhHHHhcCCcCCCcchHHHHHHHHHHHhhccCCCCcceeEe
Confidence            456667899999999999999999999855  999999999999999999999999999999999999999999999999


Q ss_pred             EcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCchhhhcC
Q 048614          105 FDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN  165 (165)
Q Consensus       105 ~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~~~k~~  165 (165)
                      ||+.+.++|||||+ .++++|.+|++|+.+|+++.+||.|||+++|++||+.|.+++||++
T Consensus       105 ~De~mavivMEdls-~~kilR~~LI~Gr~~P~~~~~igeFlarTLf~~sDl~m~~k~kK~~  164 (408)
T COG4857         105 FDEIMAVIVMEDLS-PHKILRRALIDGRILPNIVDDIGEFLARTLFRGSDLSMNTKDKKAD  164 (408)
T ss_pred             ecchhhhhhHhhhh-HHHHHHHHHhccccCccHHHHHHHHHHHHHHhccccccchHhHHHH
Confidence            99999999999999 4999999999999999999999999999999999999999999974

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.28  E-value=2e-11  Score=97.11  Aligned_cols=101  Identities=25%  Similarity=0.261  Sum_probs=87.8

Q ss_pred             eEEEEEEeCCCeEEEeecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHH
Q 048614           46 NFVYIVVGSSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIIL  124 (165)
Q Consensus        46 N~v~rv~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~l  124 (165)
                      +-|+++..-+..+|+|...|+. |...-|-.+..+|++.|+++|..+..+ .-.||.+|++|+.+..++|||++  +..+
T Consensus        10 a~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~-GV~~P~v~dvD~~~~~I~me~I~--G~~l   86 (204)
T COG3642          10 AIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREA-GVPVPIVYDVDPDNGLIVMEYIE--GELL   86 (204)
T ss_pred             eeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCEEEEEEeC--ChhH
Confidence            4455664433389999999997 765457789999999999999999887 88999999999999999999998  6899


Q ss_pred             HHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 048614          125 RKGLIAGIKYPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       125 r~~l~~g~~~~~~a~~iG~~La~~h~~  151 (165)
                      |+.+..+  .+.++..+|..+|++|..
T Consensus        87 kd~l~~~--~~~~~r~vG~~vg~lH~~  111 (204)
T COG3642          87 KDALEEA--RPDLLREVGRLVGKLHKA  111 (204)
T ss_pred             HHHHHhc--chHHHHHHHHHHHHHHhc
Confidence            9999987  589999999999999975

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.15  E-value=3.9e-10  Score=85.02  Aligned_cols=102  Identities=18%  Similarity=0.146  Sum_probs=79.4

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMR  115 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vME  115 (165)
                      .++++++|..|.||+++..+++++||+..+...       ... ....|+++|+.+...  ..+|+++.+|.+...+|||
T Consensus         2 ~~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-------~~~-~~~~E~~~l~~l~~~--~~~P~~~~~~~~~~~lv~e   71 (170)
T cd05151           2 HISPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-------LLI-NRENEAENSKLAAEA--GIGPKLYYFDPETGVLITE   71 (170)
T ss_pred             ceeecCCcccCceEEEEECCeEEEEEeCCCCcc-------ccc-CHHHHHHHHHHHHHh--CCCCceEEEeCCCCeEEEE
Confidence            578999999999999998866999999864321       112 237899999998774  4589999999989999999


Q ss_pred             cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ++++  ..+...   ....+....++|+.|+++|..+
T Consensus        72 ~i~G--~~l~~~---~~~~~~~~~~l~~~l~~LH~~~  103 (170)
T cd05151          72 FIEG--SELLTE---DFSDPENLEKIAKLLKKLHSSP  103 (170)
T ss_pred             ecCC--Cccccc---cccCHHHHHHHHHHHHHHhCCC
Confidence            9983  333322   1234678899999999999876

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.10  E-value=7e-10  Score=86.46  Aligned_cols=111  Identities=17%  Similarity=0.225  Sum_probs=84.1

Q ss_pred             ceeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-----
Q 048614           35 LTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT-----  108 (165)
Q Consensus        35 ~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~-----  108 (165)
                      +.++++++|..|.+|||...+| ++|||...+--.      .-...+...|+++++.+... ...+|+++.++++     
T Consensus         1 ~~~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~------~~~~~~~~~E~~~~~~l~~~-~~~vp~~~~~~~~~~~~~   73 (223)
T cd05154           1 LEVRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGAL------LPSAHDVAREYRVLRALAGT-GVPVPKVLALCEDPSVLG   73 (223)
T ss_pred             CcceecCCCccceEEEEEecCCcceEEEeCCCccc------CcccccHHHHHHHHHHhhCC-CCCCCCEEEECCCCCccC
Confidence            3578999999999999998875 999999753211      12345789999999999884 4469999999987     


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcccc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~tsd  154 (165)
                      ...++||+++  +..+...+..+...    ..++.++|+.|+++|..+..
T Consensus        74 ~~~~v~e~i~--G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~  121 (223)
T cd05154          74 TPFYVMERVD--GRVLRDRLLRPELSPEERRALARALADTLAALHSVDPA  121 (223)
T ss_pred             CceEEEEEeC--CEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChh
Confidence            4589999998  34555544322222    36799999999999988753

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.95  E-value=5.1e-09  Score=83.76  Aligned_cols=114  Identities=18%  Similarity=0.141  Sum_probs=93.7

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vM  114 (165)
                      ++..+..|-=-.|++....+..-|||...|+- |...-|-.++..|+..|++.|.....+ .-.+|.+|+.|..++.+.|
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~-GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRAL-GIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHh-CCCCceEEEEecCCCeEEE
Confidence            45555556556888888775578899998886 764447789999999999999999887 8899999999999999999


Q ss_pred             ecCCCCchHHHHHHHcCC----CC---HHHHHHHHHHHHHHHhc
Q 048614          115 RYLEPPHIILRKGLIAGI----KY---PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~----~~---~~~a~~iG~~La~~h~~  151 (165)
                      |+++ ++..+|+.+..--    .+   ..++..||+.+|++|.-
T Consensus        90 E~~~-g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n  132 (229)
T KOG3087|consen   90 EFID-GASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN  132 (229)
T ss_pred             Eecc-chhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC
Confidence            9998 6888888887632    22   36899999999999963

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.91  E-value=9.8e-09  Score=79.71  Aligned_cols=108  Identities=22%  Similarity=0.203  Sum_probs=85.3

Q ss_pred             cCCCceeEEEEEEeCCCeEEEeecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCC
Q 048614           40 VGDGNLNFVYIVVGSSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLE  118 (165)
Q Consensus        40 l~~Gn~N~v~rv~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~  118 (165)
                      +|.|+...||++...+..+++|+..+.. +....++.+..+|...|.++|+.+... ...+|.++.++++...++||+++
T Consensus         2 ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         2 IAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKA-GVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEEEECCCCEEEEEEEC
Confidence            6889999999999654499999987654 221124667778999999999888753 34789999999999999999997


Q ss_pred             CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          119 PPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       119 ~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                        +..|.+.+..+..  .++.+++..|+.+|...
T Consensus        81 --g~~l~~~~~~~~~--~~~~~i~~~l~~lH~~g  110 (199)
T TIGR03724        81 --GKPLKDVIEEGND--ELLREIGRLVGKLHKAG  110 (199)
T ss_pred             --CccHHHHHhhcHH--HHHHHHHHHHHHHHHCC
Confidence              4577776655432  78999999999999865

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.80  E-value=1.4e-08  Score=79.01  Aligned_cols=104  Identities=25%  Similarity=0.296  Sum_probs=77.3

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC---C--Cc
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR---T--MS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~---~--~~  110 (165)
                      .|+++++|..|.+|+|++.+|++|||...+. .        ...+...|+++++.+.+.-. .||+++.++.   .  ..
T Consensus         1 ~i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~-~--------~~~~~~~e~~~~~~l~~~~~-pvP~~~~~~~~~~~~~~~   70 (239)
T PF01636_consen    1 HIRPLSGGFSNRVYRVTTDDGRYVLKFYRPP-D--------AAERLRREAAVLRQLAEHGI-PVPRVLAFDTSDEFNGFP   70 (239)
T ss_dssp             -EEEEEESSSSEEEEEEETTSEEEEEEESSH-H--------HHHHHHHHHHHHHHHHHTTS-BS--EEEEEEETEETSEE
T ss_pred             CCccCCCCCeeeEEEEEECCcEEEEEEeCCC-C--------CHHHHHHHHHHHHHHHhcCC-CCceEEeecccccccccc
Confidence            4789999999999999999889999997755 2        22688899999999987633 7999998442   2  23


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ..+|++++  ...+.. .+.....+.++.++|++|+++|..+
T Consensus        71 ~~~~~~i~--g~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~  109 (239)
T PF01636_consen   71 YLLMEYIP--GRPLDD-ELSPEQRPELLRQLGRALAQLHQVP  109 (239)
T ss_dssp             EEEEEEES--SEEHHH-TSTHHHHHHHHHHHHHHHHHHHHSH
T ss_pred             eEEEEEec--cccccc-cccccccccccccchhhhhhccccc
Confidence            68999998  344444 1122234678999999999999985

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.74  E-value=1.1e-07  Score=76.60  Aligned_cols=101  Identities=16%  Similarity=0.077  Sum_probs=76.2

Q ss_pred             eEecCCCce-eEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEE
Q 048614           37 IKEVGDGNL-NFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT--MSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~-N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~--~~~~v  113 (165)
                      .++|..|.. |.||+++..+++++||...+..          ..+...|+++|+.+++.  ..+|+++++++.  ...+|
T Consensus         3 ~~~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~----------~~~~~~E~~~l~~l~~~--~~vP~v~~~~~~~~~~~lv   70 (244)
T cd05150           3 WERVTEGQSGATVYRLDGKNPGLYLKIAPSGP----------TYELEREAERLRWLAGK--LPVPEVIDYGSDDGRAWLL   70 (244)
T ss_pred             ceecCCCCCcCeEEEEcCCCCcEEEEecCCCc----------ccchHHHHHHHHHHHhc--CCCCeEEEEEecCCccEEE
Confidence            356666655 9999999876699999987442          23556799999999876  569999999876  47899


Q ss_pred             EecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  +..+..... ....+.++.++|++|+++|...
T Consensus        71 ~e~i~--G~~l~~~~~-~~~~~~~~~~l~~~l~~lH~i~  106 (244)
T cd05150          71 TSAVP--GVPAAALWE-ELEPERLVDALAEALRRLHALP  106 (244)
T ss_pred             EEeeC--CccHhHhhc-ccCHHHHHHHHHHHHHHHhcCC
Confidence            99998  345544322 1223578999999999999865

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PRK05231 homoserine kinase; Provisional

Probab=98.71  E-value=3e-07  Score=76.82  Aligned_cols=129  Identities=14%  Similarity=0.124  Sum_probs=92.7

Q ss_pred             CCccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHH
Q 048614            4 TEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYF   83 (165)
Q Consensus         4 ~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~   83 (165)
                      +-|..|+.+++.+.|+.-+.        .+-.+++++++|..|.+|+|++.+|++|||...   +       .+.+....
T Consensus         2 ~vyt~ls~~~l~~~l~~y~~--------~~~~~~~~l~~G~~n~~y~v~t~~g~~vLK~~~---~-------~~~~~l~~   63 (319)
T PRK05231          2 AVYTDVSDDELAAFLAPYDL--------GELLSLKGIAEGIENSNFFLTTTQGEYVLTLFE---R-------LTAEDLPF   63 (319)
T ss_pred             CccccCCHHHHHHHHHhcCC--------chhhccchhccccccceEEEEeCCCcEEEEEec---c-------CChHHhHH
Confidence            45889999999999965321        133578999999999999999888899999643   1       23355667


Q ss_pred             HHHHHHHhhccCCCCCceEEEE--------cCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 048614           84 EALALKEHGQLCPDHVPEVYHF--------DRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus        84 E~~~L~~~~~~~p~~vP~v~~~--------D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      |.++|+.+.+. .-.||+++..        ......++||++++ . .+      ....+..+.++|+.||++|..+.+|
T Consensus        64 ~~~~l~~L~~~-glpvP~~i~~~~G~~~~~~~g~~~~l~~~l~G-~-~~------~~~~~~~~~~~G~~LA~lH~~~~~f  134 (319)
T PRK05231         64 FLGLMQHLAAR-GVPVPAPVARRDGAALGELAGKPAAIVTFLEG-K-WP------RAPTAAHCAEVGEMLARMHLAGRDF  134 (319)
T ss_pred             HHHHHHHHHHC-CCCCCcceeCCCCCEeeeeCCEEEEEEEecCC-C-CC------CCCCHHHHHHHHHHHHHHHhhhhcC
Confidence            88888887653 2236776642        23446889999983 2 21      1134567899999999999999887


Q ss_pred             ccCc
Q 048614          156 YRTT  159 (165)
Q Consensus       156 ~l~~  159 (165)
                      ....
T Consensus       135 ~~~~  138 (319)
T PRK05231        135 PLER  138 (319)
T ss_pred             CccC
Confidence            6543

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.71  E-value=1.1e-07  Score=74.34  Aligned_cols=112  Identities=21%  Similarity=0.127  Sum_probs=83.5

Q ss_pred             EecCCCceeEEEEEEeCCCeEEEeecCcccccc-CCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEec
Q 048614           38 KEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCI-GESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRY  116 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~-~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEd  116 (165)
                      +.+|.|....||++...++.++||+..+..... ..+.....+|...|++.|+.+... ...+|.++++|.+...++|||
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKA-GVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCeEEEEeCCCCEEEEEE
Confidence            568899999999998755599999977654211 112334456788899998877642 356899999999999999999


Q ss_pred             CCCCchHHHHHHHcCC-CCHHHHHHHHHHHHHHHhcc
Q 048614          117 LEPPHIILRKGLIAGI-KYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       117 L~~~~~~lr~~l~~g~-~~~~~a~~iG~~La~~h~~t  152 (165)
                      ++  +..|.+.+.... ....++.+++.+|+.+|...
T Consensus        81 ~~--G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  115 (211)
T PRK14879         81 IE--GEPLKDLINSNGMEELELSREIGRLVGKLHSAG  115 (211)
T ss_pred             eC--CcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCC
Confidence            97  457777665432 22478999999999999764

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=98.70  E-value=2.3e-07  Score=73.96  Aligned_cols=105  Identities=13%  Similarity=0.062  Sum_probs=76.5

Q ss_pred             ceeEecCCCceeEEEEEEeCC--C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCce
Q 048614           35 LTIKEVGDGNLNFVYIVVGSS--G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSL  111 (165)
Q Consensus        35 ~~v~~l~~Gn~N~v~rv~~~~--g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~  111 (165)
                      +++++++||..|.+|||+..+  + ++|+|...+..       ....+| ..|.++++.++..  +.+|+++++..  ..
T Consensus         1 ~~i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~-------~~~~d~-~~E~~~~~~l~~~--gl~P~v~~~~~--~~   68 (235)
T cd05157           1 ITFKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKT-------ELIIDR-ERELRIHKLLSKH--GLAPKLYATFQ--NG   68 (235)
T ss_pred             CeEEEcCCcccceEEEEEcCCCCCCeEEEEEccCCc-------cceecH-HHHHHHHHHHHhC--CCCCeEEEEeC--Cc
Confidence            468999999999999999874  4 89999655321       122333 3599999998764  35899987764  45


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLY  156 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~  156 (165)
                      ++||+++ + ..+...-+   ..+....++|..||++|..+..+.
T Consensus        69 ~l~e~i~-G-~~l~~~~~---~~~~~~~~la~~l~~lH~~~~~~~  108 (235)
T cd05157          69 LIYEFIP-G-RTLEPEDL---RNPKIYRLIARELAKLHSIKPPEA  108 (235)
T ss_pred             EEEEeeC-C-CcCCHHHc---cChHHHHHHHHHHHHHhccccccc
Confidence            8999998 3 34432211   246788999999999999987764

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=98.68  E-value=1.8e-07  Score=78.78  Aligned_cols=97  Identities=23%  Similarity=0.237  Sum_probs=69.2

Q ss_pred             CcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCc
Q 048614           33 DALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RTMS  110 (165)
Q Consensus        33 ~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~~~  110 (165)
                      .-.++++++||-+|-.||+++.++++.||....-.+          .....|++-|+.+++..|..||+++.+-  .+..
T Consensus        18 ~i~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~~~----------~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~   87 (288)
T PF03881_consen   18 KITSIEPVSGGDINEAYRLDTDGGSYFVKVNSESGR----------DMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDA   87 (288)
T ss_dssp             ---EEEEE--SSSSEEEEEETTS-EEEEEEEEGGGC----------CHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCC
T ss_pred             ceeeeEecCCCChhheEEEECCCccEEEEecChhhH----------HHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCc
Confidence            345999999999999999997766999998872211          4788999999999999999999999975  3566


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Q 048614          111 LIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLF  150 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~  150 (165)
                      .++||++.. .          ...+...+.+|+.||++|.
T Consensus        88 fLlle~l~~-~----------~~~~~~~~~lg~~LA~LH~  116 (288)
T PF03881_consen   88 FLLLEFLEM-G----------SPSPPDWEELGRQLAALHQ  116 (288)
T ss_dssp             EEEEE-------------------CCHHHHHHHHHHHHHH
T ss_pred             eEEEEeecC-C----------CCCchhHHHHHHHHHHHhh
Confidence            899999973 2          1123468999999999999

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.67  E-value=1.6e-07  Score=67.50  Aligned_cols=103  Identities=21%  Similarity=0.191  Sum_probs=78.8

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT--MSLIG  113 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~--~~~~v  113 (165)
                      .+++++.|..|.||++...++.++||+..+...         ..+...|..+|+.+... +..+|+++.+...  ...++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~---------~~~~~~e~~~~~~l~~~-~~~~p~~~~~~~~~~~~~~v   71 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSREK---------GADREREVAILQLLARK-GLPVPKVLASGESDGWSYLL   71 (155)
T ss_pred             cceecccccccceEEEEecCCeEEEEecCCCCc---------hhHHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCccEEE
Confidence            357899999999999998767899998754322         46788899999999876 6788999888765  79999


Q ss_pred             EecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++.  ..+...  .....+..+.++++.|+.+|..+
T Consensus        72 ~e~~~g--~~~~~~--~~~~~~~~~~~~~~~l~~lh~~~  106 (155)
T cd05120          72 MEWIEG--ETLDEV--SEEEKEDIAEQLAELLAKLHQLP  106 (155)
T ss_pred             EEecCC--eecccC--CHHHHHHHHHHHHHHHHHHhCCC
Confidence            999973  233221  11223567899999999999764

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=98.66  E-value=4.4e-07  Score=75.84  Aligned_cols=127  Identities=12%  Similarity=0.162  Sum_probs=91.8

Q ss_pred             CccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHH
Q 048614            5 EFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFE   84 (165)
Q Consensus         5 ~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E   84 (165)
                      -|..++.+.+.++|...+.        .+..+++++++|..|.+|+|++++|+.|+|...+.         .+.++...|
T Consensus         3 ~~~~~~~~~l~~~l~~y~~--------~~~~~i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~---------~~~~~i~~e   65 (307)
T TIGR00938         3 VYTSVSDEEMSSFLDGYDL--------GELLSLKGIAEGVENSNYLLTTDVGRYILTLYEKR---------VKAEELPFF   65 (307)
T ss_pred             ccccCCHHHHHHHHHhcCC--------CCceeccccCCccccceEEEEeCCCcEEEEEecCC---------CCHHHHHHH
Confidence            4788999999999986531        23457999999999999999988779999975431         124577788


Q ss_pred             HHHHHHhhcc-CCCCCceEEEEc--------CCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 048614           85 ALALKEHGQL-CPDHVPEVYHFD--------RTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus        85 ~~~L~~~~~~-~p~~vP~v~~~D--------~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      .++++.+.+. .|  ||+++...        .....++||++++  ..+.      ...+..+.++|+.||++|..+.+|
T Consensus        66 ~~~l~~L~~~g~p--vp~~i~t~~g~~~~~~~g~~~~l~e~i~G--~~~~------~~~~~~~~~~G~~LA~lH~~~~~~  135 (307)
T TIGR00938        66 LALTTHLAARGLP--VPKPVKSRDGRQLSTLAGKPACLVEFLQG--LSVG------RPTAMHCRPVGEVLAWMHLAGAHF  135 (307)
T ss_pred             HHHHHHHHHCCCC--CCccccCCCCCeehhcCCeEEEEEEeCCC--CCCC------CCCHHHHHHHHHHHHHHHhhhccC
Confidence            8988887552 23  56665522        2334689999983  2331      124567899999999999999887


Q ss_pred             ccC
Q 048614          156 YRT  158 (165)
Q Consensus       156 ~l~  158 (165)
                      ..+
T Consensus       136 ~~~  138 (307)
T TIGR00938       136 PEN  138 (307)
T ss_pred             CCC
Confidence            544

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PLN02876 acyl-CoA dehydrogenase

Probab=98.63  E-value=5.9e-07  Score=84.90  Aligned_cols=135  Identities=19%  Similarity=0.249  Sum_probs=94.2

Q ss_pred             ccCHhhHHHHHHhCC-CcccccCCCCCcceeEecCCCceeEEEEEEeCCC----eEEEeecCccccccCCCCCCChHHHH
Q 048614            8 PLDDKSLLEYIKATP-SLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG----SFVIKQALPYVRCIGESWPMTKERAY   82 (165)
Q Consensus         8 ~l~~~~v~~Yl~~~~-~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~g----svIvKqa~p~~r~~~~~~~l~~~R~~   82 (165)
                      .++.+.+..||+++. .+    +.+.+.++++.+++|.+|.+|+|+..++    .+|+|...+-..      ..+.....
T Consensus        17 ~~d~~~l~~~l~~~~~~~----~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~------~~~~~~~~   86 (822)
T PLN02876         17 RFDEDALLRYAAANVAGF----PVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKL------LQSAHAVE   86 (822)
T ss_pred             cCCHHHHHHHHHHhCCCc----CCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCcc------CccHHHHH
Confidence            588899999999752 11    1123347999999999999999987653    678887654321      22345778


Q ss_pred             HHHHHHHHhhccCCCCCceEEEEcCC-----CceEEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhcccc
Q 048614           83 FEALALKEHGQLCPDHVPEVYHFDRT-----MSLIGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus        83 ~E~~~L~~~~~~~p~~vP~v~~~D~~-----~~~~vMEdL~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~tsd  154 (165)
                      .|+++|+.++......||++|.+..+     ...+|||+++.  .++.+....+..   ...++.++++.|+++|...-+
T Consensus        87 rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G--~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~  164 (822)
T PLN02876         87 REYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEG--RIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVD  164 (822)
T ss_pred             HHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCC--cccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCch
Confidence            99999999976545679999998554     45689999983  344332111111   124788999999999997643

>PRK10593 hypothetical protein; Provisional

Probab=98.61  E-value=1.4e-07  Score=79.24  Aligned_cols=108  Identities=14%  Similarity=0.090  Sum_probs=79.0

Q ss_pred             ceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC-----CC
Q 048614           35 LTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR-----TM  109 (165)
Q Consensus        35 ~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~-----~~  109 (165)
                      .+++++++|..|-||++.+.+++++||.....         .+.+-...|++.|+.+++.....||+++..-.     ..
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~---------~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~   87 (297)
T PRK10593         17 SRVECISEQPYAALWALYDSQGNPMPLMARSF---------STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGP   87 (297)
T ss_pred             heeeecCCccceeEEEEEcCCCCEEEEEeccc---------ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCC
Confidence            48999999999999999988778888985421         12357889999999998865578999997532     44


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                      ..+|||++..  .++.+..........+++.+|+.||++|..++
T Consensus        88 ~~LVmE~i~G--~~~~~~~~~~~~~~~l~~~l~~~La~LH~~~~  129 (297)
T PRK10593         88 DVLLLERLRG--VSVEAPARTPERWEQLKDQIVEGLLAWHRIDS  129 (297)
T ss_pred             eEEEEeccCC--EecCCCCCCHHHHHHHHHHHHHHHHHHhCCCh
Confidence            8999999983  34333111111123567778899999999754

>TIGR02721 ycfN_thiK thiamine kinase

Probab=98.59  E-value=2.8e-07  Score=74.93  Aligned_cols=101  Identities=14%  Similarity=0.148  Sum_probs=73.6

Q ss_pred             eEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEec
Q 048614           37 IKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRY  116 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEd  116 (165)
                      |.+++||..|.+||++.+++++|+|...+-.+      .+..+| ..|+++|+.+++.  +.+|+++++|+  ..+|||+
T Consensus         1 ~~~~~~G~tn~~y~~~~~~~~~vlR~~~~~~~------~~~~~r-~~E~~~l~~l~~~--g~~P~~i~~~~--~~~v~e~   69 (256)
T TIGR02721         1 VQTLSGGLTNRSWRIEHPGISFVWRPQSPVCK------ALGVDR-QREYQILQALSAL--GLAPKPILVNE--HWLLVEW   69 (256)
T ss_pred             CCcCCCcCcCCeEEEEeCCccEEEeeCCcccc------cccCcH-HHHHHHHHHHHhc--CCCCceEEEeC--CEEEEEe
Confidence            45789999999999996655999997554322      122334 6699999999874  24899999986  5799999


Q ss_pred             CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 048614          117 LEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus       117 L~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                      ++ + ..+...   ....+....++++.|+++|....
T Consensus        70 i~-G-~~~~~~---~~~~~~~~~~la~~l~~lH~~~~  101 (256)
T TIGR02721        70 LE-G-EVITLD---QFVALDLLLELAALLHQLHSQPR  101 (256)
T ss_pred             cc-C-cccccc---cccCchhHHHHHHHHHHHhCCCC
Confidence            98 3 344321   11245678999999999998764

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=98.56  E-value=6.5e-07  Score=73.87  Aligned_cols=120  Identities=15%  Similarity=0.124  Sum_probs=85.7

Q ss_pred             hhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHh
Q 048614           12 KSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEH   91 (165)
Q Consensus        12 ~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~   91 (165)
                      +.+..++..-+        ..+..+++++.+|..|.+|+|.+.++++|+|...+          -+.++...|.++++.+
T Consensus         2 ~~l~~~l~~y~--------~~~~~~i~~i~~G~~n~~y~v~~~~~~~vLr~~~~----------~~~~~~~~e~~~l~~L   63 (296)
T cd05153           2 EELASFLADYD--------LGELLSFEGISAGIENTNYFVTTDSGRYVLTLFEK----------VSAEELPFFLALLDHL   63 (296)
T ss_pred             HHHHHHHHHcC--------CCchhheecccCccccceEEEEeCCCcEEEEEcCC----------CChHhccHHHHHHHHH
Confidence            34556666543        12345899999999999999998877999997654          1236788899999988


Q ss_pred             hccCCCCCceEEEEcC--------CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccC
Q 048614           92 GQLCPDHVPEVYHFDR--------TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT  158 (165)
Q Consensus        92 ~~~~p~~vP~v~~~D~--------~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~  158 (165)
                      ++. .-.+|+++....        ....++|+++++  ..+..      ..+....++|+.||++|..++++..+
T Consensus        64 ~~~-g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~G--~~~~~------~~~~~~~~lg~~La~lH~~~~~~~~~  129 (296)
T cd05153          64 AER-GLPVPRPIADRDGEYLSELAGKPAALVEFLAG--EHLTR------PTAAHCRQIGEALARLHLAAQSFPGE  129 (296)
T ss_pred             HHC-CCCCCccccCCCCcEeeeeCCceEEEEEeCCC--CCCCC------CCHHHHHHHHHHHHHHHHHhccCCcc
Confidence            764 223677665432        334689999983  23311      34678999999999999998877554

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=98.53  E-value=4.1e-07  Score=75.45  Aligned_cols=104  Identities=15%  Similarity=0.117  Sum_probs=76.3

Q ss_pred             ceeEecCCCceeEEEEEEeCC-------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc
Q 048614           35 LTIKEVGDGNLNFVYIVVGSS-------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD  106 (165)
Q Consensus        35 ~~v~~l~~Gn~N~v~rv~~~~-------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D  106 (165)
                      +++++++||..|.+|+|+..+       + ++|+|...       .+..... ....|+++++.+++.-  .+|++++++
T Consensus         1 ~~i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~-------~~~~~~~-~r~~E~~~~~~l~~~g--~~P~~~~~~   70 (302)
T cd05156           1 LEVSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYG-------QSVELLI-DRERELVVFARLSERN--LGPKLYGIF   70 (302)
T ss_pred             CeEEEecCcccceeEEEEcCCcccccCCCCeEEEEEec-------CCCccee-chHHHHHHHHHHHhCC--CCCceEEEe
Confidence            468999999999999999765       3 77777733       2222222 3478999999998753  589999999


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      +.  ..|||++. +. .+....+   ..|..+.++|..|+++|......
T Consensus        71 ~~--~~v~e~i~-G~-~l~~~~~---~~~~~~~~ia~~L~~lH~~~~~~  112 (302)
T cd05156          71 PN--GRIEEFIP-SR-TLTTEEL---RDPDISAEIARRMAKLHSIVVPL  112 (302)
T ss_pred             CC--CchhheeC-CC-cCCHhHc---CCcHHHHHHHHHHHHhhCCCCCC
Confidence            74  56899998 33 4433322   24678999999999999987653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.41  E-value=1.5e-06  Score=70.38  Aligned_cols=102  Identities=16%  Similarity=0.092  Sum_probs=75.9

Q ss_pred             eEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEE
Q 048614           37 IKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIGM  114 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~vM  114 (165)
                      .+++++|..|.||+..  ++++|+|...+..         +..+...|+++|+.+... +-.||+++++  |.+...++|
T Consensus         6 ~~~i~~G~t~~~y~~~--~~~~VlR~~~~~~---------~~~~i~~E~~~l~~l~~~-glpvP~~~~~~~~~~~~glv~   73 (226)
T TIGR02172         6 WTQTGEGGNGESYTHK--TGKWMLKLYNPGF---------DKETIKREFDASRKVFSL-GIPTPHPFDLVEDGGRLGLIY   73 (226)
T ss_pred             heeecCCCCcceeEec--CCCEEEEeCCCCC---------CHHHHHHHHHHHHHHHHc-CCCCCceEEEEecCCeeeeee
Confidence            4789999999999853  3389999987533         335678899999998854 6678999999  666678899


Q ss_pred             ecCCCCchHHHHHHHcCC-CCHHHHHHHHHHHHHHHhc
Q 048614          115 RYLEPPHIILRKGLIAGI-KYPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~-~~~~~a~~iG~~La~~h~~  151 (165)
                      |.++ +...+...+.... ..+.++..+|..++++|..
T Consensus        74 e~i~-G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~  110 (226)
T TIGR02172        74 ELIV-GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHST  110 (226)
T ss_pred             eecC-CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCC
Confidence            9998 3333433333222 2246899999999999974

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.40  E-value=1.4e-06  Score=70.01  Aligned_cols=102  Identities=17%  Similarity=0.111  Sum_probs=74.6

Q ss_pred             eEecC-CCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-----Cc
Q 048614           37 IKEVG-DGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT-----MS  110 (165)
Q Consensus        37 v~~l~-~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~-----~~  110 (165)
                      ++++. ||..|.||++.   +++|+|...+..         +..+...|+++|+.+.+.++..+|+++...+.     ..
T Consensus         2 ~~~~~~gG~~n~vy~~~---~~~VlR~~~~~~---------~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~   69 (235)
T cd05155           2 IEPVDSGGTDNATFRLG---DDMSVRLPSAAG---------YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWP   69 (235)
T ss_pred             ceeccCCCcccceEEcC---CceEEEcCCccc---------hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcc
Confidence            45565 89999999983   378889755321         23578899999999987667889999987654     23


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd  154 (165)
                      .++||+++  +.++......  ....+++++|++|+++|..+..
T Consensus        70 ~~l~~~i~--G~~l~~~~~~--~~~~l~~~la~~l~~LH~i~~~  109 (235)
T cd05155          70 WSVYRWLE--GETATAAALS--DPSEFAEDLADFLAALRQIDPS  109 (235)
T ss_pred             eEEEEeec--CCCCCccccC--CHHHHHHHHHHHHHHHhCCCcc
Confidence            67899998  4555443211  1237899999999999987653

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.35  E-value=7.8e-06  Score=66.65  Aligned_cols=114  Identities=13%  Similarity=0.018  Sum_probs=81.7

Q ss_pred             eEecC-CCceeEEEEEEeCCCeEEEeecCc-c--ccccCCC--C-CCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-
Q 048614           37 IKEVG-DGNLNFVYIVVGSSGSFVIKQALP-Y--VRCIGES--W-PMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT-  108 (165)
Q Consensus        37 v~~l~-~Gn~N~v~rv~~~~gsvIvKqa~p-~--~r~~~~~--~-~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~-  108 (165)
                      -..+| .|..|.||+|...++.++||+... -  .++...+  | .....|...|++.|+.+... .-.||+++.+... 
T Consensus        36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~-gi~vP~pl~~~~~~  114 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEA-GLPVPRPIAARVVR  114 (239)
T ss_pred             CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhC-CCCCceeEeeeeee
Confidence            34675 899999999999877999998852 1  1221111  1 35667899999999988663 2346777765221 


Q ss_pred             C-----ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          109 M-----SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~-----~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      .     ..+|||+++ +...|.+.+.++........+|+.+|+.+|...
T Consensus       115 ~~~~~~~~lV~e~l~-G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~G  162 (239)
T PRK01723        115 HGLFYRADILIERIE-GARDLVALLQEAPLSEEQWQAIGQLIARFHDAG  162 (239)
T ss_pred             cCcceeeeEEEEecC-CCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCC
Confidence            1     249999998 567788877776656678899999999999875

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=98.30  E-value=6.7e-06  Score=68.51  Aligned_cols=106  Identities=17%  Similarity=0.080  Sum_probs=76.8

Q ss_pred             cceeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceE
Q 048614           34 ALTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLI  112 (165)
Q Consensus        34 ~~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~  112 (165)
                      .-++...+.|.-|.||+|.+.+| .+|||++++ ..+        ..|...|+++|+.++..+|..+|+++..+.+  .+
T Consensus        13 ~~~~~~~~~g~~~~v~~i~~~~g~~~VlR~p~~-~~~--------~~~l~rE~~vL~~L~~~l~vpvP~~~~~~~~--~~   81 (276)
T cd05152          13 PETLSLNESGLDFQVVFAKDTDGVPWVLRIPRR-PDV--------SERAAAEKRVLALVRKHLPVQVPDWRVHTPE--LI   81 (276)
T ss_pred             CCcceecCCcceeEEEEEEcCCCCeEEEEecCC-HHH--------HHHHHHHHHHHHHHHhcCCCCCCceeeecCc--eE
Confidence            34667778888899999977656 999999952 221        2578899999999998778899998877765  46


Q ss_pred             EEecCCCCch-----------HHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 048614          113 GMRYLEPPHI-----------ILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus       113 vMEdL~~~~~-----------~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                      +|+.++. ..           .|....  ....+.+|.++|++|+++|....
T Consensus        82 ~y~~i~G-~p~~~~~~~~~~~~~~~~~--~~~~~~la~~la~~La~LH~i~~  130 (276)
T cd05152          82 AYPKLPG-VPAATIDPEIGEYVWNFDH--KNPPEVFIESLAKALAELHSIPQ  130 (276)
T ss_pred             EEeccCC-CcccccCcccccceecccC--CCcCHHHHHHHHHHHHHHhCCCh
Confidence            7887773 21           111100  12346799999999999997664

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=98.19  E-value=1.6e-05  Score=68.07  Aligned_cols=131  Identities=15%  Similarity=0.148  Sum_probs=96.9

Q ss_pred             cccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHH
Q 048614            7 RPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEAL   86 (165)
Q Consensus         7 ~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~   86 (165)
                      ..++...+..||..+-  +   + -.+...+++.++|.+|.+|++.+.+.++||- ..|....     ..+.++...|++
T Consensus         6 ~~~~~~~l~~~l~~~i--p---~-~~~~~~v~~~~~G~sn~t~~~~~~~~~~vlR-~P~~~~~-----~~~~~~~~re~~   73 (321)
T COG3173           6 VALDIAALAAYLRSQI--P---G-YAGLLIVEEISGGWSNDTFRLGDTGQKYVLR-KPPRGDP-----VESAHDEKREYR   73 (321)
T ss_pred             ccCCHHHHHHHHHhhC--c---C-cCCCceeeeccCCcccceEEEecCCceEEEe-cCCcccc-----chhhhHHHhHHH
Confidence            3567788899998641  1   1 2345688889999999999999885589988 5553433     245677778888


Q ss_pred             HHHHhhccCCCCCceEEEEcCCCc----eEEEecCCCCchHHHHHHHcCCCCHHHHH-HHHHHHHHHHhcc
Q 048614           87 ALKEHGQLCPDHVPEVYHFDRTMS----LIGMRYLEPPHIILRKGLIAGIKYPLLAE-HMSEFMAKTLFYT  152 (165)
Q Consensus        87 ~L~~~~~~~p~~vP~v~~~D~~~~----~~vMEdL~~~~~~lr~~l~~g~~~~~~a~-~iG~~La~~h~~t  152 (165)
                      +|+.+... +..+|..+.+=.+.+    -+||+++.  +...+..+..+.....++. ++|++||.+|.--
T Consensus        74 ~i~~l~~~-~vP~p~~~~~~~~~~~g~pf~v~~~ve--Ge~~~~~~~~~~~~~~~~~~~l~~~La~LH~id  141 (321)
T COG3173          74 VIAALLDV-DVPVPRAFGLCGEGYLGTPFYVMEWVE--GEVVWSALPPESLGRQFALDALADFLAELHSID  141 (321)
T ss_pred             HHHHhcCC-CCCCcccccccccCCCCCceEEEEEec--ceeccCcCCcccchHHHHHHHHHHHHHHHhCCC
Confidence            88888776 778888888888888    99999998  3344454444433345666 9999999999865

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.14  E-value=1.2e-05  Score=72.42  Aligned_cols=110  Identities=24%  Similarity=0.151  Sum_probs=83.4

Q ss_pred             eEecCCCceeEEEEEEeCCCeEEEeecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 048614           37 IKEVGDGNLNFVYIVVGSSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMR  115 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vME  115 (165)
                      .+.+|.|....||++...++.+++|...+.. +....++....+|...|+++|+.+... ...+|.++..+++...+|||
T Consensus       338 ~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~~~~~lv~E  416 (535)
T PRK09605        338 DHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRA-GVPTPVIYDVDPEEKTIVME  416 (535)
T ss_pred             cceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhccc-CCCeeEEEEEeCCCCEEEEE
Confidence            4677999999999998776677777766543 222224456678899999999988642 34568889999999999999


Q ss_pred             cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      |++  ...|.+.+.   ....++.+++..|+.+|...
T Consensus       417 ~~~--g~~L~~~l~---~~~~~~~~i~~~L~~lH~~g  448 (535)
T PRK09605        417 YIG--GKDLKDVLE---GNPELVRKVGEIVAKLHKAG  448 (535)
T ss_pred             ecC--CCcHHHHHH---HHHHHHHHHHHHHHHHHhCC
Confidence            997  457777664   23568999999999999864

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.13  E-value=4e-05  Score=62.81  Aligned_cols=107  Identities=10%  Similarity=-0.025  Sum_probs=76.5

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHH------HHHHHHHHHHhhccCCCCCceEEEEcCC-
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKER------AYFEALALKEHGQLCPDHVPEVYHFDRT-  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R------~~~E~~~L~~~~~~~p~~vP~v~~~D~~-  108 (165)
                      .++.+++|-.+.||.+.+..+.+|||+=.|.....    +.-..|      ...|+..+..+... .-.+|..++.|++ 
T Consensus        35 ~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~----~~~~~~f~~g~~~e~Ea~~l~rL~~~-GI~~~~d~~~~~~~  109 (232)
T PRK10359         35 TIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRT----ERFLKSFVKGDYYENLIVQTDRVRSE-GLASLNDFYLLAER  109 (232)
T ss_pred             EEEEecCCCceEEEEEecCCCcEEEEEechhcCch----HHHHHhhhhhHHHHHHHHHHHHHHHC-CCCcceEeeeeccc
Confidence            78899999999999988754599999988776421    112233      34565567766442 4467777877765 


Q ss_pred             -------CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          109 -------MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 -------~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                             ...++|||++  +..|++..   ........+++..|+.+|...
T Consensus       110 ~~~~~~~~~~lvmEyi~--G~tL~~~~---~~~~~~~~~i~~~l~~lH~~g  155 (232)
T PRK10359        110 KTLRYAHTYIMLIEYIE--GVELNDMP---EISEDVKAKIKASIESLHQHG  155 (232)
T ss_pred             ccccccCCeEEEEEEEC--CccHHHhh---hccHHHHHHHHHHHHHHHHcC
Confidence                   4788999998  45776652   234567889999999999753

>PLN02236 choline kinase

Probab=98.02  E-value=3e-05  Score=66.44  Aligned_cols=123  Identities=10%  Similarity=0.044  Sum_probs=84.9

Q ss_pred             HhhHHHHHHhCC-CcccccCCCCCcceeEecCCCceeEEEEEEeCC-----C-eEEEeecCccccccCCCCCCChHHHHH
Q 048614           11 DKSLLEYIKATP-SLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSS-----G-SFVIKQALPYVRCIGESWPMTKERAYF   83 (165)
Q Consensus        11 ~~~v~~Yl~~~~-~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~-----g-svIvKqa~p~~r~~~~~~~l~~~R~~~   83 (165)
                      +.++...+++.. ... ++ .+.+.++++++.||..|.+|+|+..+     + ++|+|.-.+..       .+-.+| ..
T Consensus        16 ~~~~~~~~~~~~~~w~-~~-~~~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t-------~~~idR-~~   85 (344)
T PLN02236         16 PDELKRILHSLASKWG-DV-VDDEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV-------ELFFDR-DD   85 (344)
T ss_pred             hHHHHHHHHHhcchhc-CC-CCcCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC-------Ceeech-HH
Confidence            445666666531 111 00 13467899999999999999997431     2 68877655432       344567 78


Q ss_pred             HHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614           84 EALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        84 E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      |..+++.+++.  +..|+++++++..  .|.||+.  ...|...-+   ..|.+..+++..|+++|...
T Consensus        86 E~~~~~~l~~~--gl~P~~~~~~~~g--~v~efi~--g~~l~~~~l---~~~~~~~~ia~~L~~lH~~~  145 (344)
T PLN02236         86 EIRTFECMSRH--GQGPRLLGRFPNG--RVEEFIH--ARTLSAADL---RDPEISALIAAKLREFHSLD  145 (344)
T ss_pred             HHHHHHHHHHc--CCCCceEEEECCc--eEEEeeC--CCCCCHHHc---CChHHHHHHHHHHHHHhCCC
Confidence            99999998884  5689999998543  7899996  345543221   35678999999999999854

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=97.97  E-value=4.8e-05  Score=64.77  Aligned_cols=105  Identities=11%  Similarity=0.093  Sum_probs=76.5

Q ss_pred             CCCcceeEecCCCceeEEEEEEeCC----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 048614           31 KFDALTIKEVGDGNLNFVYIVVGSS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF  105 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rv~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  105 (165)
                      +.++++++++.||..|.+|||+..+    + ++|||.-.+..     +  .-.+| ..|..+++.+++.  +..|+++++
T Consensus        13 ~~~~i~i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t-----~--~~IdR-~~E~~il~~l~~~--gl~P~~l~~   82 (330)
T PLN02421         13 DDSDFSVERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNT-----D--YVIDR-ERELQAIKYLSAA--GFGAKLLGV   82 (330)
T ss_pred             CcCceEEEEeCCcccceEEEEEecCCCCCCceEEEEEecCCc-----C--eEech-HHHHHHHHHHHhc--CCCCceeEE
Confidence            4568999999999999999997543    1 68877655432     2  23445 5699999998874  567999998


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ++ +. +|.+++.  +..|...-+   ..|.....|+..|+++|...
T Consensus        83 ~~-~G-~i~~fi~--g~~l~~~~l---~~~~~~~~ia~~L~~lH~~~  122 (330)
T PLN02421         83 FG-NG-MIQSFIN--ARTLTPSDM---RKPKVAAEIAKELRRLHQVE  122 (330)
T ss_pred             eC-Cc-Eeehhhc--CCCCChHHC---CCHHHHHHHHHHHHHHhCCC
Confidence            84 44 5899996  345533111   34678999999999999854

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.95  E-value=0.00011  Score=58.25  Aligned_cols=94  Identities=18%  Similarity=0.075  Sum_probs=74.4

Q ss_pred             eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC------CceEEEecCCCCchHHHHHHHc
Q 048614           57 SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT------MSLIGMRYLEPPHIILRKGLIA  130 (165)
Q Consensus        57 svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~------~~~~vMEdL~~~~~~lr~~l~~  130 (165)
                      ++.+|.-..++...---.++...|...|++.++.+.+. ...||+++.|...      .+.+|||+++ +...|.+.+.+
T Consensus        34 ~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~-Gi~tP~pva~~~~r~~~~~~s~lite~l~-~~~~L~~~~~~  111 (206)
T PF06293_consen   34 RYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREA-GIPTPEPVAYGERRKGGGYRSYLITEALP-GAQDLRDLLQQ  111 (206)
T ss_pred             EEEECCeechhccchhhhcccchHHHHHHHHHHHHHHc-CCCCCcEEEEEEEcCCCceeEEEEEEeCC-CcccHHHHHHh
Confidence            78888766655321123458889999999999999885 6679999999887      4589999998 68899888876


Q ss_pred             -----CCCCHHHHHHHHHHHHHHHhcc
Q 048614          131 -----GIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       131 -----g~~~~~~a~~iG~~La~~h~~t  152 (165)
                           ......+..++|.+++++|...
T Consensus       112 ~~~~~~~~~~~ll~~l~~~i~~lH~~g  138 (206)
T PF06293_consen  112 WEQLDPSQRRELLRALARLIAKLHDAG  138 (206)
T ss_pred             hcccchhhHHHHHHHHHHHHHHHHHCc
Confidence                 3344689999999999999875

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.93  E-value=0.0001  Score=61.16  Aligned_cols=99  Identities=18%  Similarity=0.161  Sum_probs=76.6

Q ss_pred             CcceeEecCCCceeEEEEEEeCCCeEEEeecC-ccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--CC
Q 048614           33 DALTIKEVGDGNLNFVYIVVGSSGSFVIKQAL-PYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR--TM  109 (165)
Q Consensus        33 ~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~-p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--~~  109 (165)
                      +--+.++++||-+|--|||++....+.||.-. +++.           =...|+.-|+.+++.-...||++|..+.  ..
T Consensus        17 ~i~er~~v~gG~inea~~v~dg~~~~FvK~n~~~~~~-----------~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~   85 (286)
T COG3001          17 EIKEREEVSGGDINEAWRLRDGTDPFFVKCNQREQLS-----------MFTAEADGLELLARSNTITVPKVIAVGASRDH   85 (286)
T ss_pred             hhhcccccCCccccceeEeecCCcceEEEecchhhHH-----------HHHHHHHHHHHHHhcCCccccceEEecCCCCe
Confidence            34488999999999999999886677777432 2221           2345666688888876789999998876  45


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                      +.+|||||+.           |..++.-+.++|.-||++|..+.
T Consensus        86 sylVle~L~~-----------~~~d~~~~~~~GqqLA~LH~~~~  118 (286)
T COG3001          86 SYLVLEYLPT-----------GPLDAHSAFILGQQLARLHQWGG  118 (286)
T ss_pred             eEEEEeeccC-----------CCCCchhHHHHHHHHHHHHhhcC
Confidence            7899999982           44567778999999999999875

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.87  E-value=0.0002  Score=59.68  Aligned_cols=111  Identities=14%  Similarity=-0.009  Sum_probs=75.4

Q ss_pred             eEecCCCceeEEEEEEeCCCeEEEeecCcccc--ccCCC--CCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC-----
Q 048614           37 IKEVGDGNLNFVYIVVGSSGSFVIKQALPYVR--CIGES--WPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR-----  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r--~~~~~--~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~-----  107 (165)
                      +++..+.+   |+|+...+..+.||+-.+...  ....-  +..|..+...|++.+..+.+. ...||+++.|-.     
T Consensus        30 v~~~~~rr---vvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~-GIptP~pVa~~e~~~~~  105 (268)
T PRK15123         30 FRELEGRR---TLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEV-GVDTMTGVAFGERGSNP  105 (268)
T ss_pred             EecCCCce---EEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHc-CCCCCCeeEEEEecCCC
Confidence            34444444   678887655999998765541  11111  123445789999999999886 666777755542     


Q ss_pred             --CCceEEEecCCCCchHHHHHHHcC---CCC----HHHHHHHHHHHHHHHhcc
Q 048614          108 --TMSLIGMRYLEPPHIILRKGLIAG---IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 --~~~~~vMEdL~~~~~~lr~~l~~g---~~~----~~~a~~iG~~La~~h~~t  152 (165)
                        ..+.+|||+++ +..++++.+.+.   ...    ..+..++|.+++++|...
T Consensus       106 ~~~~s~LVte~l~-~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G  158 (268)
T PRK15123        106 ATRTSFIITEDLA-PTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG  158 (268)
T ss_pred             ccceeEEEEeeCC-CCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence              34789999999 677888887532   111    257789999999999875

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=97.83  E-value=0.00022  Score=61.26  Aligned_cols=131  Identities=15%  Similarity=0.137  Sum_probs=94.7

Q ss_pred             CCCCccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHH
Q 048614            2 AFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERA   81 (165)
Q Consensus         2 ~~~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~   81 (165)
                      .+..|..++.+++.+.|...+.        ..+.+...+.. .-|.+|+|.+.+|+.|||-..|- +.        ..-.
T Consensus         4 ~~~~~~~~~~~~~~~~l~~~~~--------g~~~~~~~l~s-~eN~~f~~~~~~g~~iLki~~~~-~~--------~~~i   65 (331)
T COG2334           4 SMAVFTPLTSDEAAAALEAYHY--------GLDGSLRGLNS-EENSNFRVQTEDGRYILKIYRPG-WT--------RAEI   65 (331)
T ss_pred             ccccccCcChHHHHHHHHhcCc--------Ccccccccccc-ccCceEEEEecCCCeEEEEecCC-CC--------HHHH
Confidence            4567899999999999987542        22345666666 88999999999997799998865 32        2467


Q ss_pred             HHHHHHHHHhhcc-CCCCCceEEEEc-------C--CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 048614           82 YFEALALKEHGQL-CPDHVPEVYHFD-------R--TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus        82 ~~E~~~L~~~~~~-~p~~vP~v~~~D-------~--~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~  151 (165)
                      ..|-++|+.+.+- +|..+| +-.-|       .  .-..-+.|+++  +..+..     ..-...++.+|++||++|..
T Consensus        66 ~~el~~l~~La~~~i~v~~P-l~~~dG~~l~~~~~~~r~a~lf~~l~--G~~~~~-----~~~~~~~~~lG~~LgrlH~a  137 (331)
T COG2334          66 PFELALLQHLAERGIPVPAP-LPSLDGELLEALSGGPRPAALFEYLP--GRPLER-----DDNAEQLEELGRMLGRLHLA  137 (331)
T ss_pred             HHHHHHHHHHHHcCCCCCCC-ccCCCcchhhhccCCceeEEEEEecC--CcCcCC-----CCcHHHHHHHHHHHHHHHHH
Confidence            7888899988773 344444 22222       1  25677889998  445543     34567899999999999999


Q ss_pred             ccccccC
Q 048614          152 TSLLYRT  158 (165)
Q Consensus       152 tsd~~l~  158 (165)
                      +.+|-+.
T Consensus       138 ~~~f~~~  144 (331)
T COG2334         138 LRGFPFE  144 (331)
T ss_pred             hCcCCcc
Confidence            9999753

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=97.78  E-value=0.0004  Score=54.15  Aligned_cols=109  Identities=17%  Similarity=0.043  Sum_probs=71.6

Q ss_pred             EecCCCceeEEEEEEeCCC-eEEEeecCccccccCC---------C-------C---CCChHHHHHHHHHHHHhhccCCC
Q 048614           38 KEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGE---------S-------W---PMTKERAYFEALALKEHGQLCPD   97 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~---------~-------~---~l~~~R~~~E~~~L~~~~~~~p~   97 (165)
                      .++|.|..-.||++.+.+| .++||.-.+-......         .       +   .+...+...|++.|+.+... ..
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i   81 (190)
T cd05145           3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA-GV   81 (190)
T ss_pred             ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence            4688999999999998767 8999987765321000         0       0   01133456788888887653 34


Q ss_pred             CCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHh
Q 048614           98 HVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus        98 ~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~  150 (165)
                      .+|.++.++  ..++||||++. .......+.++...    ..++.++...|..+|.
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g-~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~  135 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGD-DGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQ  135 (190)
T ss_pred             CCceEEEec--CCEEEEEEecC-CCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            678888765  36899999983 32222223333332    4678889999999998

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PTZ00384 choline kinase; Provisional

Probab=97.72  E-value=0.00041  Score=60.60  Aligned_cols=126  Identities=13%  Similarity=0.094  Sum_probs=81.9

Q ss_pred             hhHHHHHHh-CCCcccccCCCCCcceeEecCCCceeEEEEEEeCCC---eEEEeecCccccccCCCCCCChHHHHHHHHH
Q 048614           12 KSLLEYIKA-TPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG---SFVIKQALPYVRCIGESWPMTKERAYFEALA   87 (165)
Q Consensus        12 ~~v~~Yl~~-~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~   87 (165)
                      .++...+++ .|.++   ..+.+.+++++++||-.|.+|+|+.+++   ...+|.-+  +|..|..-.+-.+| ..|.++
T Consensus        32 ~~~~~~~~~~~p~w~---~~~~~~i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl--~R~~g~~~~l~IdR-~~E~~i  105 (383)
T PTZ00384         32 SNLKSLCIRHVPFWN---NVNPEFIEIKKMNNGITNQVYQATLVDGDKDRYPIKSVC--IKKSSTYNSLVIDN-DLQYNI  105 (383)
T ss_pred             HHHHHHHHHHCCccc---cCCcccEEEEEeCCcccceEEEEEecCCCCCccccceEE--EEeccCCCceEecc-HHHHHH
Confidence            445555554 23221   1145678999999999999999986532   23223211  12222332344455 567888


Q ss_pred             HHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614           88 LKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        88 L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ++.+++  -+..|++|+.++  +.++.|++..  ..+-..-   -..|.+...|+..||++|...
T Consensus       106 ~~~Ls~--~glgP~l~~~f~--~g~l~efIeG--r~l~~~d---l~~p~~~~~IA~~La~lH~~~  161 (383)
T PTZ00384        106 AKLLGD--NNFGPKIIGRFG--DFTIQEWVEG--NTMGIDS---LQNLSVLTGIASSLAKFHKRV  161 (383)
T ss_pred             HHHHHh--CCCCCeEEEecC--CEEEEEEecc--ccCChhH---hcCHHHHHHHHHHHHHHhccc
Confidence            888776  367899999996  4699999983  3443311   135778999999999999964

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=97.70  E-value=0.00014  Score=60.13  Aligned_cols=109  Identities=17%  Similarity=0.040  Sum_probs=69.7

Q ss_pred             CCCceeEEEEEEeC------CC----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhc----cCC------CCCc
Q 048614           41 GDGNLNFVYIVVGS------SG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQ----LCP------DHVP  100 (165)
Q Consensus        41 ~~Gn~N~v~rv~~~------~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~----~~p------~~vP  100 (165)
                      |+|++..+|||+..      ++    ++|||-...-...  .+..-...=...|..+++.+..    +.+      ..+|
T Consensus         2 Gd~y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~--~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P   79 (294)
T PF02958_consen    2 GDNYLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSR--REFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFP   79 (294)
T ss_pred             CCcceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhh--hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeec
Confidence            78999999999762      11    8999997621110  1122223344566666654432    222      3589


Q ss_pred             eEEEEcCCC--ceEEEecCCC-CchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 048614          101 EVYHFDRTM--SLIGMRYLEP-PHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus       101 ~v~~~D~~~--~~~vMEdL~~-~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd  154 (165)
                      ++|+.+.+.  .++|||||.. ++... ..  .......-++.+-+.||++|..+-.
T Consensus        80 ~~~~~~~~~~~~~lvlEDL~~~g~~~~-~~--~~~l~~~~~~~~l~~LA~fHA~s~~  133 (294)
T PF02958_consen   80 KCYYADEDPGDEVLVLEDLSEKGYRMG-DR--RDGLDLEHAELVLKKLAKFHAASWA  133 (294)
T ss_pred             eEEEeccCCCceeeehhhhhhcCCccc-cc--ccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999988664  5999999985 33332 11  1124567789999999999998754

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>PRK11768 serine/threonine protein kinase; Provisional

Probab=97.63  E-value=0.0013  Score=55.91  Aligned_cols=125  Identities=14%  Similarity=0.075  Sum_probs=81.5

Q ss_pred             CccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHH
Q 048614            5 EFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYF   83 (165)
Q Consensus         5 ~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~   83 (165)
                      .|..||++.|.+-|...|...        +-.+.. -++.-|.||+|.+.+| .+|+|...|--      |  +.+-...
T Consensus         7 ~~~~l~p~~~~~a~~~~g~~~--------~~~~~~-l~s~eN~vy~v~~~~~~~~vlKv~r~~~------~--~~~~i~~   69 (325)
T PRK11768          7 PFQTLTPDLILDALESLGLRV--------DGRLLA-LNSYENRVYQFGDEDGRRVVAKFYRPER------W--SDAQILE   69 (325)
T ss_pred             CCCCCChHHHHHHHHHcCCCC--------ccceEe-eccccceEEEEecCCCCEEEEEEcCccc------C--CHHHHHH
Confidence            789999999999998775431        112333 3456699999998877 89999876432      2  3455778


Q ss_pred             HHHHHHHhhcc-CCCCCce------EEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 048614           84 EALALKEHGQL-CPDHVPE------VYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus        84 E~~~L~~~~~~-~p~~vP~------v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      |.+++..+.+. +|...|.      +..++ ...+.+++++++ . ..      ....+...+++|.+||++|..+...
T Consensus        70 E~~~l~~L~~~gipv~~p~~~~G~~~~~~~-g~~~~l~~~~~G-~-~~------~~~~~~~~~~lG~~LarlH~~~~~~  139 (325)
T PRK11768         70 EHAFALELAEAEIPVVAPLAFNGQTLHEHQ-GFRFALFPRRGG-R-AP------ELDNLDQLEWVGRFLGRIHQVGAKR  139 (325)
T ss_pred             HHHHHHHHHHCCCCCCCCccCCCCEEEEEC-CEEEEEEeeeCC-C-CC------CCCCHHHHHHHHHHHHHHHhhccCC
Confidence            89998888663 4543331      12221 234556666662 1 11      1123567899999999999977643

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.62  E-value=0.00022  Score=56.60  Aligned_cols=99  Identities=23%  Similarity=0.224  Sum_probs=58.3

Q ss_pred             EEEEEeCCC-eEEEeecCccccc----------c--------CCCC-CCChHHHHHHHHHHHHhhccCCCCCceEEEEcC
Q 048614           48 VYIVVGSSG-SFVIKQALPYVRC----------I--------GESW-PMTKERAYFEALALKEHGQLCPDHVPEVYHFDR  107 (165)
Q Consensus        48 v~rv~~~~g-svIvKqa~p~~r~----------~--------~~~~-~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~  107 (165)
                      ||.+.+++| .++||-=+.....          .        ...| .+...|+..|++.|+.+.+. ...||++|.++ 
T Consensus         2 Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~-Gv~vP~p~~~~-   79 (188)
T PF01163_consen    2 VYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEA-GVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCT-T-SS--EEEEE-
T ss_pred             EEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHC-CccCCcEEEEe-
Confidence            677877767 7888865532110          0        0122 45667888999999988886 56799999665 


Q ss_pred             CCceEEEecCCCCc---hHHHHHHHcCCCCHHHHHHHHHHHHHHH
Q 048614          108 TMSLIGMRYLEPPH---IILRKGLIAGIKYPLLAEHMSEFMAKTL  149 (165)
Q Consensus       108 ~~~~~vMEdL~~~~---~~lr~~l~~g~~~~~~a~~iG~~La~~h  149 (165)
                       .+++||||+++++   ..|++.-........+..++...+..++
T Consensus        80 -~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~  123 (188)
T PF01163_consen   80 -RNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKML  123 (188)
T ss_dssp             -TTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHH
T ss_pred             -CCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHH
Confidence             8999999998323   3344433222344577778777555543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK09902 hypothetical protein; Provisional

Probab=97.58  E-value=0.0018  Score=52.70  Aligned_cols=106  Identities=11%  Similarity=0.044  Sum_probs=81.7

Q ss_pred             CceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhcc-CCCCCceEEEEcC------CCceEEEe
Q 048614           43 GNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQL-CPDHVPEVYHFDR------TMSLIGMR  115 (165)
Q Consensus        43 Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~-~p~~vP~v~~~D~------~~~~~vME  115 (165)
                      |-..=|+|+...+..+-|||-.-+++.. --.|++..=...|...|+.+.+. +|  ||++.++..      -...+|.|
T Consensus        29 gG~SgV~r~~~~g~~~ylKrq~nhl~~s-~r~P~g~ptf~rE~~~L~~L~~~GvP--VP~pvf~~~~k~~~~~rA~LVTe  105 (216)
T PRK09902         29 NGMSGVQCVERNGKKLYVKRMTHHLFHS-VRYPFGRPTIVREVAVIKELERAGVI--VPKIVFGEAVKIEGEWRALLVTE  105 (216)
T ss_pred             CCcceEEEEEeCCcEEEEEeccCccccc-ccCCCCchHHHHHHHHHHHHHHcCCC--CCccceeeeeccCCceEEEEEEE
Confidence            4555689998775589999999888642 22356666677899999999886 45  999997752      34899999


Q ss_pred             cCCCCchHHHHHHHcCCCC-------HHHHHHHHHHHHHHHhcc
Q 048614          116 YLEPPHIILRKGLIAGIKY-------PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g~~~-------~~~a~~iG~~La~~h~~t  152 (165)
                      +|+ ++.+|-+.+.++...       ..+-.++|..++++|...
T Consensus       106 ~L~-g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G  148 (216)
T PRK09902        106 DMA-GFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN  148 (216)
T ss_pred             eCC-CCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC
Confidence            999 799997777665442       368899999999999876

>PRK06148 hypothetical protein; Provisional

Probab=97.56  E-value=0.002  Score=62.71  Aligned_cols=128  Identities=13%  Similarity=0.160  Sum_probs=88.1

Q ss_pred             ccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHH
Q 048614            8 PLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEAL   86 (165)
Q Consensus         8 ~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~   86 (165)
                      .+|.+.+.+-+.++=      +..   -+++++++. -|.+|+|+.++| .+|+|...|-.         +......|.+
T Consensus        10 ~~s~~~~~~~~~~~y------gl~---~~~~~L~s~-~d~nf~v~~~~g~~yVLKi~~~~~---------~~~~~~~q~~   70 (1013)
T PRK06148         10 EFTTKDAEALLAQHF------GIS---ATATPLDGE-RDLNFRLTTDDGADYILKIVNPSE---------PRVESDFQTA   70 (1013)
T ss_pred             CCCHHHHHHHHHHHc------CCc---eEEeecCCc-CCceEEEEeCCCCeEEEEEcCCcc---------chhHHHHHHH
Confidence            478888888888752      111   256888655 599999998877 99999988631         2235556677


Q ss_pred             HHHHhhccCCC-CCceEEEEcC----------C---CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614           87 ALKEHGQLCPD-HVPEVYHFDR----------T---MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        87 ~L~~~~~~~p~-~vP~v~~~D~----------~---~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      +|..+.+-.|+ .||+++.-..          +   ..+-+|++++  +..|.+.   ....+....++|++||++|..+
T Consensus        71 ~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~~vrLl~~l~--G~~l~~~---~~~t~~~~~~lG~~larlh~al  145 (1013)
T PRK06148         71 ALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPRLLRLLSWLP--GTPLAEA---APRTEALLDNLGRALGRLDRAL  145 (1013)
T ss_pred             HHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceEEEEEEeccC--CCcHHhc---cCCCHHHHHHHHHHHHHHHHHH
Confidence            88877765333 3565553221          1   2466899998  3455431   3345789999999999999999


Q ss_pred             cccccCc
Q 048614          153 SLLYRTT  159 (165)
Q Consensus       153 sd~~l~~  159 (165)
                      ++|.-+.
T Consensus       146 ~~F~~p~  152 (1013)
T PRK06148        146 QGFMHPG  152 (1013)
T ss_pred             hcCCCCC
Confidence            9987553

>smart00090 RIO RIO-like kinase

Probab=97.50  E-value=0.001  Score=54.14  Aligned_cols=110  Identities=15%  Similarity=0.028  Sum_probs=72.5

Q ss_pred             EecCCCceeEEEEEE--eCCC-eEEEeecCccccccC--CCCC----------CC-----hHHHHHHHHHHHHhhccCCC
Q 048614           38 KEVGDGNLNFVYIVV--GSSG-SFVIKQALPYVRCIG--ESWP----------MT-----KERAYFEALALKEHGQLCPD   97 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~--~~~g-svIvKqa~p~~r~~~--~~~~----------l~-----~~R~~~E~~~L~~~~~~~p~   97 (165)
                      +.+|.|..--||++.  ..+| .++||...+-.....  ..|.          .+     ..+...|++.|+.+... ..
T Consensus        34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~-~i  112 (237)
T smart00090       34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEA-GV  112 (237)
T ss_pred             CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence            579999999999998  4456 899998775331100  0010          01     12456799999888752 45


Q ss_pred             CCceEEEEcCCCceEEEecCCCCchHHHHHHHc-CCC----CHHHHHHHHHHHHHHHhcc
Q 048614           98 HVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIA-GIK----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        98 ~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~-g~~----~~~~a~~iG~~La~~h~~t  152 (165)
                      .+|+++.+.  .+.+|||+++.  ..+...+.. +..    ...++.+|...|+.+|...
T Consensus       113 ~~p~~~~~~--~~~lV~E~~~g--~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g  168 (237)
T smart00090      113 PVPKPIAWR--RNVLVMEFIGG--DGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEG  168 (237)
T ss_pred             CCCeeeEec--CceEEEEEecC--CcccccccccCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence            678988764  56899999983  233222222 211    1268899999999999877

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=97.44  E-value=0.002  Score=50.53  Aligned_cols=109  Identities=15%  Similarity=0.022  Sum_probs=67.2

Q ss_pred             EecCCCceeEEEEEEeCCC-eEEEeecCccccccCCC--------C------C-----CChHHHHHHHHHHHHhhccCCC
Q 048614           38 KEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGES--------W------P-----MTKERAYFEALALKEHGQLCPD   97 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~--------~------~-----l~~~R~~~E~~~L~~~~~~~p~   97 (165)
                      ..+|.|..-.||++.+.+| .++||.-.+-......+        +      .     +...+...|++.|+.+... ..
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~v   81 (190)
T cd05147           3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA-GI   81 (190)
T ss_pred             CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence            3578899999999998777 89999876532111000        0      0     0012334588888888652 22


Q ss_pred             CCceEEEEcCCCceEEEecCCCCchHHHHHHH-cCCCC----HHHHHHHHHHHHHH-Hhc
Q 048614           98 HVPEVYHFDRTMSLIGMRYLEPPHIILRKGLI-AGIKY----PLLAEHMSEFMAKT-LFY  151 (165)
Q Consensus        98 ~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~-~g~~~----~~~a~~iG~~La~~-h~~  151 (165)
                      .+|.++.+  ..+.+||||++ + ..+....+ .+...    ..++.+++..|+.+ |..
T Consensus        82 ~~p~~~~~--~~~~iVmE~i~-g-~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~  137 (190)
T cd05147          82 PCPEPILL--KSHVLVMEFIG-D-DGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDC  137 (190)
T ss_pred             CCCcEEEe--cCCEEEEEEeC-C-CCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            46777654  45699999998 3 34433322 33222    24678888999988 553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=97.43  E-value=0.0039  Score=49.65  Aligned_cols=105  Identities=19%  Similarity=0.088  Sum_probs=74.2

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vM  114 (165)
                      -.+.+|.|....||++.+..+ .+++|...+.-        ...++...|..+|+.+..  |..+|-...+......++|
T Consensus        10 ~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~--------~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~v~   79 (260)
T cd05069          10 LDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT--------MMPEAFLQEAQIMKKLRH--DKLVPLYAVVSEEPIYIVT   79 (260)
T ss_pred             eeeeecCcCCCeEEEEEEcCCceEEEEEcccCC--------ccHHHHHHHHHHHHhCCC--CCeeeEEEEEcCCCcEEEE
Confidence            345688888888999988765 78888754321        233677788888887653  6667766677777888999


Q ss_pred             ecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |+++  ...|.+.+....  ..     -.++.++...|+.+|...
T Consensus        80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~  122 (260)
T cd05069          80 EFMG--KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN  122 (260)
T ss_pred             EcCC--CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9998  346666665422  11     357788999999999754

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=97.40  E-value=0.00061  Score=56.50  Aligned_cols=101  Identities=15%  Similarity=0.047  Sum_probs=76.4

Q ss_pred             ecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecC
Q 048614           39 EVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYL  117 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL  117 (165)
                      ++.+|..++|+.|...+| ..|+|.+.|.-...         .-..+..+|+.++-   .-+.+++..|++..++.||.+
T Consensus         9 ~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~~~---------~E~~g~~~L~~w~G---~GaVrll~~d~~~~AlLLErl   76 (253)
T PF04655_consen    9 PPAHGSSSLVVPVRRADGTPAVLKLAPPHAEAE---------HEARGEAALRWWNG---RGAVRLLAADPERGALLLERL   76 (253)
T ss_pred             CCCCCcceEEEEEEcCCCCeEEEEecCCcccch---------hhhhHHhHhheeCC---CCceeeeccccccchhhhhhc
Confidence            567999999999999888 89999999876532         11223355776644   234599999999999999999


Q ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 048614          118 EPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus       118 ~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                      . ....|.+...+|. +......++..+.++|....
T Consensus        77 ~-~g~~L~~~~~~g~-d~~a~~i~a~l~~~L~~~~~  110 (253)
T PF04655_consen   77 D-PGRSLASLPREGD-DDEATRIAAGLLRRLHRPAP  110 (253)
T ss_pred             c-CCCchhhcccccC-chHHHHHHHHHHHHHhCCCC
Confidence            6 3678876554443 35668889999999998865

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=97.34  E-value=0.0025  Score=52.58  Aligned_cols=92  Identities=15%  Similarity=0.059  Sum_probs=64.0

Q ss_pred             EEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--------cCCCceEEEecCC
Q 048614           47 FVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--------DRTMSLIGMRYLE  118 (165)
Q Consensus        47 ~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--------D~~~~~~vMEdL~  118 (165)
                      -||+|.+++|++|||...           .+.++...|.+++..+.+-- ..||.++.-        .......+||+++
T Consensus        11 ~v~~v~t~~g~~~LK~~~-----------~~~~~~~~~~~~~~~L~~~g-~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~   78 (313)
T TIGR02906        11 NVYKVETDSGNKCLKKIN-----------YPPERLLFILGAQEHLRKNG-FNIPKILKTKDGELYVKYNGDLYVLTEWIE   78 (313)
T ss_pred             cEEEEEeCCCCeEEEEcC-----------CCHHHHHHHHHHHHHHHHcC-CCCCceeecCCCCEEEEECCEEEEEehhcc
Confidence            499999888899999752           12367788888888876531 144444432        2345678899997


Q ss_pred             CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccC
Q 048614          119 PPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT  158 (165)
Q Consensus       119 ~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~  158 (165)
                      +  ..+-      ...+..+.++|+.||++|..+.++..+
T Consensus        79 G--~~~~------~~~~~~~~~~g~~La~lH~~~~~~~~~  110 (313)
T TIGR02906        79 G--RECD------FNNPIDLKKAAKGLALFHHASKGYVPP  110 (313)
T ss_pred             C--cCCC------CCCHHHHHHHHHHHHHHHHhCCCCCCC
Confidence            3  2221      223667899999999999999988543

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PTZ00296 choline kinase; Provisional

Probab=97.32  E-value=0.0017  Score=57.78  Aligned_cols=105  Identities=14%  Similarity=0.072  Sum_probs=75.9

Q ss_pred             CCCcceeEecCCCceeEEEEEEeCCC----------eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc
Q 048614           31 KFDALTIKEVGDGNLNFVYIVVGSSG----------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP  100 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rv~~~~g----------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP  100 (165)
                      +.++++++++.||-.|.+|+|+..++          ++++       |+.|++-..-.+| ..|..+++.+++.  +..|
T Consensus       104 ~~~~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lv-------RiyG~~te~lIdR-~~E~~v~~~ls~~--gi~P  173 (442)
T PTZ00296        104 TEDDVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLF-------RIYGKDVDELYNP-ISEFEVYKTMSKY--RIAP  173 (442)
T ss_pred             CcccEEEEEecCcccCceEEEEecCCCCccccCcCceEEE-------EecCCCccceeCH-HHHHHHHHHHHHC--CCCC
Confidence            34578999999999999999986532          4544       4444433233355 5688999888874  6788


Q ss_pred             eEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          101 EVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       101 ~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ++|..  ..+..+-|++. + ..|+..=+   ..|....+|+..|+++|...
T Consensus       174 ~l~~~--f~gg~I~efi~-g-~~l~~~dl---~~~~~~~~iA~~L~~lH~~~  218 (442)
T PTZ00296        174 QLLNT--FSGGRIEEWLY-G-DPLRIDDL---KNPSILIGIANVLGKFHTLS  218 (442)
T ss_pred             ceEEE--eCCCEEEEeeC-C-ccCCHHHc---CCHHHHHHHHHHHHHHhccc
Confidence            98854  46888999998 3 45544222   35788999999999999875

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.24  E-value=0.0052  Score=46.84  Aligned_cols=109  Identities=17%  Similarity=0.125  Sum_probs=68.1

Q ss_pred             EecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCC-----------------CCChHHHHHHHHHHHHhhccCCCCC
Q 048614           38 KEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESW-----------------PMTKERAYFEALALKEHGQLCPDHV   99 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~-----------------~l~~~R~~~E~~~L~~~~~~~p~~v   99 (165)
                      ..+|.|+...||++.+.+| .++||.-.+-.......+                 .+.......|.+.+..+... ...+
T Consensus         3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~~~~   81 (187)
T cd05119           3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA-GVPV   81 (187)
T ss_pred             cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc-CCCC
Confidence            4688999999999998866 899997554322100001                 11112234566666555443 3458


Q ss_pred             ceEEEEcCCCceEEEecCCCCc---hHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Q 048614          100 PEVYHFDRTMSLIGMRYLEPPH---IILRKGLIAGIKYPLLAEHMSEFMAKTLF  150 (165)
Q Consensus       100 P~v~~~D~~~~~~vMEdL~~~~---~~lr~~l~~g~~~~~~a~~iG~~La~~h~  150 (165)
                      |+++.++  ...++||+++.+.   ..+...... ...-.++.++...+..+|.
T Consensus        82 ~~~~~~~--~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~  132 (187)
T cd05119          82 PKPIDLN--RHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYR  132 (187)
T ss_pred             CceEecC--CCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhh
Confidence            8888664  5799999998311   344443322 2234688888999999997

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.23  E-value=0.00084  Score=53.71  Aligned_cols=66  Identities=14%  Similarity=0.058  Sum_probs=45.6

Q ss_pred             HHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCC---chHHHHHHHcCCCCHHHHHHHHHHHHHH-Hhc
Q 048614           83 FEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPP---HIILRKGLIAGIKYPLLAEHMSEFMAKT-LFY  151 (165)
Q Consensus        83 ~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~---~~~lr~~l~~g~~~~~~a~~iG~~La~~-h~~  151 (165)
                      .|++.|+.+.+. ...||++|.+  ..+++||||++++   ...|++..........+..+++..|+++ |..
T Consensus        75 kE~r~L~rl~~~-Gv~vP~pi~~--~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~  144 (197)
T cd05146          75 KEMHNLKRMQKA-GIPCPEVVVL--KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKEC  144 (197)
T ss_pred             HHHHHHHHHHHc-CCCCCeEEEe--cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhC
Confidence            577788888776 5679999966  7999999999842   2345543322111235678888888888 544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=97.11  E-value=0.012  Score=46.73  Aligned_cols=105  Identities=20%  Similarity=0.124  Sum_probs=72.6

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vM  114 (165)
                      -++.+|.|....||++.+.++ .+++|.-.+..        .+.++...|..+|+.+..  |..++-.-.+......++|
T Consensus        10 ~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~~~~~~lv~   79 (260)
T cd05070          10 LIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT--------MSPESFLEEAQIMKKLRH--DKLVQLYAVVSEEPIYIVT   79 (260)
T ss_pred             hhheeccccCceEEEEEecCCceeEEEEecCCC--------CCHHHHHHHHHHHHhcCC--CceEEEEeEECCCCcEEEE
Confidence            356788898889999988766 78888765421        123567788888887753  5544444445667788999


Q ss_pred             ecCCCCchHHHHHHHcCC---C----CHHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGI---K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~---~----~~~~a~~iG~~La~~h~~t  152 (165)
                      |+++  ...|.+.+.+..   .    .-.++.++...|+.+|...
T Consensus        80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~  122 (260)
T cd05070          80 EYMS--KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN  122 (260)
T ss_pred             EecC--CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9997  346777665422   1    1356778888888888764

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>PRK06149 hypothetical protein; Provisional

Probab=97.09  E-value=0.011  Score=57.45  Aligned_cols=128  Identities=17%  Similarity=0.152  Sum_probs=85.8

Q ss_pred             ccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHH
Q 048614            8 PLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALA   87 (165)
Q Consensus         8 ~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~   87 (165)
                      .+|.+++...|.++--+      .   -++.+++ |.-|.+|+|++.++++|+|...|..         +......|..+
T Consensus        16 ~ls~~~~~~ll~~~ygl------~---~~~~~L~-s~~d~nf~v~t~~~~yVLKi~~~~~---------~~~~l~~e~~~   76 (972)
T PRK06149         16 DVSEAQAERILAEHYGL------S---GTLTELG-SQQDRNFRVDSDGGRFVLKICHAAY---------AAVELEAQHAA   76 (972)
T ss_pred             CCCHHHHHHHHHHhcCC------c---eEEEecC-CcCcceEEEEecCCcEEEEeCCccC---------ChHHHHHHHHH
Confidence            47889999999765211      1   2467774 5558889999887799999988622         22467888889


Q ss_pred             HHHhhccCCC-CCceEEEEc----------C--CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 048614           88 LKEHGQLCPD-HVPEVYHFD----------R--TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus        88 L~~~~~~~p~-~vP~v~~~D----------~--~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd  154 (165)
                      |+.+.+-.|+ .||+++---          .  ...+-+++|++  +..+.+   .....+..+.++|+++|++|..+.+
T Consensus        77 l~hL~~~~~glpvp~pi~t~~G~~~~~~~~~g~~~~vrL~~~l~--G~~~~~---~~~~~~~~~~~lG~~lArlh~al~~  151 (972)
T PRK06149         77 LRHLAEREPALRVPVVIPALDGEELLTLDVRGQGLRVRLLDYLP--GQPLTR---LGHLAPASVAGLGALCARVARALAD  151 (972)
T ss_pred             HHHHHhhCCCCCCceeeECCCCCeEEEEecCCceEEEEEEEecC--Cccccc---cCCCCHHHHHHHHHHHHHHHHHHcC
Confidence            9888765322 344443211          1  22467889997  333321   1234578899999999999999999


Q ss_pred             cccCc
Q 048614          155 LYRTT  159 (165)
Q Consensus       155 ~~l~~  159 (165)
                      |.-+.
T Consensus       152 f~hp~  156 (972)
T PRK06149        152 FDHPG  156 (972)
T ss_pred             CCCCC
Confidence            97443

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=97.04  E-value=0.018  Score=46.02  Aligned_cols=105  Identities=18%  Similarity=0.065  Sum_probs=72.0

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vM  114 (165)
                      -.+.+|.|....||++.+.++ .++||.....-        ...++...|.++|+.+..  |..++-.-.+..+...++|
T Consensus        10 ~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~--------~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~~~~~~lv~   79 (262)
T cd05071          10 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAFLQEAQVMKKLRH--EKLVQLYAVVSEEPIYIVT   79 (262)
T ss_pred             EeeecCCCCCCcEEEEEecCCceEEEEecccCc--------cCHHHHHHHHHHHHhCCC--CCcceEEEEECCCCcEEEE
Confidence            445688888889999987655 78888765311        234677888888888753  5544444446667788999


Q ss_pred             ecCCCCchHHHHHHHcC--CC-----CHHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAG--IK-----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g--~~-----~~~~a~~iG~~La~~h~~t  152 (165)
                      |+++  ...|++.+.+.  ..     ...++.++...|+.+|...
T Consensus        80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~  122 (262)
T cd05071          80 EYMS--KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN  122 (262)
T ss_pred             EcCC--CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  34677777542  21     1356778888899998754

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=96.94  E-value=0.011  Score=46.08  Aligned_cols=110  Identities=18%  Similarity=0.136  Sum_probs=70.4

Q ss_pred             eEecCCCceeEEEEEEeCCC-eEEEeecCcccccc--------------CCCC-CCChHHHHHHHHHHHHhhccCCCCCc
Q 048614           37 IKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCI--------------GESW-PMTKERAYFEALALKEHGQLCPDHVP  100 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~--------------~~~~-~l~~~R~~~E~~~L~~~~~~~p~~vP  100 (165)
                      .+.++.|....||++...+| .++||...+-....              -.+| .....+...|..++..+... ...+|
T Consensus        20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~v~   98 (198)
T cd05144          20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE-GFPVP   98 (198)
T ss_pred             CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc-CCCCC
Confidence            46799999999999988767 89999743211000              0111 11222356677777776553 12577


Q ss_pred             eEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          101 EVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       101 ~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      .++.  .....++||+++  +..|.... .......++.++...+..+|...
T Consensus        99 ~~~~--~~~~~lv~e~~~--g~~L~~~~-~~~~~~~~~~~i~~~l~~lh~~g  145 (198)
T cd05144          99 KPID--WNRHAVVMEYID--GVELYRVR-VLEDPEEVLDEILEEIVKAYKHG  145 (198)
T ss_pred             ceee--cCCceEEEEEeC--Ccchhhcc-ccccHHHHHHHHHHHHHHHHHCC
Confidence            7774  456799999998  34554432 21234578899999999998753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=96.91  E-value=0.022  Score=45.04  Aligned_cols=104  Identities=13%  Similarity=0.037  Sum_probs=69.7

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EE-cCCCceEE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HF-DRTMSLIG  113 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~-D~~~~~~v  113 (165)
                      -.+.+|.|....||++...+..+++|.....         ....+...|+..|+.+..  |..++-.- .+ +.....++
T Consensus        10 ~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~---------~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~lv   78 (256)
T cd05082          10 LLQTIGKGEFGDVMLGDYRGNKVAVKCIKND---------ATAQAFLAEASVMTQLRH--SNLVQLLGVIVEEKGGLYIV   78 (256)
T ss_pred             eeeeecccCCCeEEEEEEcCCcEEEEEeCCC---------chHHHHHHHHHHHHhCCC--CCeeeEEEEEEcCCCceEEE
Confidence            4577899988999999877558898975321         224567788888887643  44444331 22 33456799


Q ss_pred             EecCCCCchHHHHHHHcCCC--C-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIK--Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~--~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|.+.+.+...  .     -.++.++...|+.+|...
T Consensus        79 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  122 (256)
T cd05082          79 TEYMA--KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN  122 (256)
T ss_pred             EECCC--CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99997  3466676654321  1     256778899999999765

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=96.87  E-value=0.017  Score=47.98  Aligned_cols=108  Identities=15%  Similarity=0.048  Sum_probs=72.2

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~  112 (165)
                      ++.+|.|....||++.+.+ + .++||.-..-...    -.-..++...|.+.|+....  |..++.++.  .+.+...+
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~--~~~i~~~~~~~~~~~~~~l   78 (324)
T cd05587           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVII----QDDDVECTMVEKRVLALPGK--PPFLTQLHSCFQTMDRLYF   78 (324)
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhcCC--CCceeeeEEEEEcCCEEEE
Confidence            5778999999999998763 3 7899975532211    01234567778777765542  455666553  45677889


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  ...|...+.....+     ..++.+|...|+-+|...
T Consensus        79 v~E~~~--~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  121 (324)
T cd05587          79 VMEYVN--GGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKG  121 (324)
T ss_pred             EEcCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  34677766554332     235677888888888754

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=96.85  E-value=0.027  Score=41.63  Aligned_cols=101  Identities=18%  Similarity=0.111  Sum_probs=72.6

Q ss_pred             cCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEEEe
Q 048614           40 VGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT--MSLIGMR  115 (165)
Q Consensus        40 l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~--~~~~vME  115 (165)
                      +|.|..+-||++...+ | .++||...+...      ....++...|.+.|+.+..   ..+|+++.+...  ...++||
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~------~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~~~~~~~~~e   71 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDS------SSLLEELLREIEILKKLNH---PNIVKLYGVFEDENHLYLVME   71 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccc------hhHHHHHHHHHHHHHhcCC---CCeeeEeeeeecCCeEEEEEe
Confidence            5788889999999874 4 899998764332      1145678888888887765   466666655554  8899999


Q ss_pred             cCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 048614          116 YLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~  151 (165)
                      +++  ...|.+.+...  ...    -.++.++...|+.+|..
T Consensus        72 ~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~  111 (215)
T cd00180          72 YCE--GGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN  111 (215)
T ss_pred             cCC--CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            998  35777776654  222    25777888888888876

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PRK09188 serine/threonine protein kinase; Provisional

Probab=96.85  E-value=0.015  Score=50.60  Aligned_cols=106  Identities=14%  Similarity=-0.000  Sum_probs=71.8

Q ss_pred             eeEecCCCceeEEEEEEeC--CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~  112 (165)
                      ....+|.|..-.||++...  ++ .+.||.-.+....  .......++...|+++|+.+..  |..+|.++.+  ....+
T Consensus        22 ~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~--~~~~~~~~~~~~E~~iL~~L~h--~~iv~~l~~~--~~~~L   95 (365)
T PRK09188         22 ETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPW--WSKPLARHLAAREIRALKTVRG--IGVVPQLLAT--GKDGL   95 (365)
T ss_pred             EccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccc--cccHHHHHHHHHHHHHHHhccC--CCCCcEEEEc--CCcEE
Confidence            5667899999999999764  34 5577765422110  0012234667889999988864  5678888755  56899


Q ss_pred             EEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~  151 (165)
                      ||||++  +..|..  ........+..++...|+.+|..
T Consensus        96 VmE~~~--G~~L~~--~~~~~~~~~~~~i~~aL~~lH~~  130 (365)
T PRK09188         96 VRGWTE--GVPLHL--ARPHGDPAWFRSAHRALRDLHRA  130 (365)
T ss_pred             EEEccC--CCCHHH--hCccchHHHHHHHHHHHHHHHHC
Confidence            999997  345642  22112357888999999999975

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=96.83  E-value=0.0069  Score=53.71  Aligned_cols=116  Identities=22%  Similarity=0.250  Sum_probs=74.0

Q ss_pred             cceeEecCCCceeEEEEEEeCCC-eEEEeecCccccc-cCCC-----------------C-CCChH--------------
Q 048614           34 ALTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRC-IGES-----------------W-PMTKE--------------   79 (165)
Q Consensus        34 ~~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~-~~~~-----------------~-~l~~~--------------   79 (165)
                      ..+-++++.|.+..|||.++.+| .|+||.-.|-++. ...|                 . .++..              
T Consensus       119 ~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  198 (437)
T TIGR01982       119 EFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRREL  198 (437)
T ss_pred             hCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHH
Confidence            44568999999999999999888 8999999887521 0000                 0 01111              


Q ss_pred             HHHHHHHHHHHhhccC---C-CCCceEEEEcCCCceEEEecCCCCchHHHHHHH---cCCCCHHHHHHHHH-HHHHHHhc
Q 048614           80 RAYFEALALKEHGQLC---P-DHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLI---AGIKYPLLAEHMSE-FMAKTLFY  151 (165)
Q Consensus        80 R~~~E~~~L~~~~~~~---p-~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~---~g~~~~~~a~~iG~-~La~~h~~  151 (165)
                      ....|++.+..+.+..   | -.+|++|.--....++||||++  +..+.+.+.   .+.....++..+.. ++..+|..
T Consensus       199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~--G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~  276 (437)
T TIGR01982       199 DLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWID--GIPLSDIAALDEAGLDRKALAENLARSFLNQVLRD  276 (437)
T ss_pred             CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeEC--CcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhC
Confidence            1345777777776543   2 3789999765677899999997  334433322   12223456766655 56666653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK12274 serine/threonine protein kinase; Provisional

Probab=96.83  E-value=0.013  Score=47.77  Aligned_cols=104  Identities=15%  Similarity=0.164  Sum_probs=69.1

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCC--CCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESW--PMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIG  113 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~--~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~v  113 (165)
                      .++.++-|....|+.+..++.+++.+    -+..+ +.|  ++...|...|+++|+.+..  +..+|+++.+  ..+.++
T Consensus         6 ~~~~l~~~~f~~v~~~~~~~~k~~~~----~l~~~-~~~~~~~~~~l~~rE~~iL~~L~~--~~~vP~ll~~--~~~~lv   76 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRGGERKFVRR----DLSAA-PWWLRGVAWWLARREALALRQLDG--LPRTPRLLHW--DGRHLD   76 (218)
T ss_pred             cceeecCCCcceEEEeecCCceeeec----ccccc-hhhhhhHHHHHHHHHHHHHHhcCC--CCCCCEEEEE--cCEEEE
Confidence            56677777778888887755465522    12111 222  2223467889999988765  3678999977  568999


Q ss_pred             EecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      |||+.  +..|.+.+..+  ...+..++...|..+|...
T Consensus        77 meyI~--G~~L~~~~~~~--~~~~~~qi~~~L~~lH~~G  111 (218)
T PRK12274         77 RSYLA--GAAMYQRPPRG--DLAYFRAARRLLQQLHRCG  111 (218)
T ss_pred             Eeeec--CccHHhhhhhh--hHHHHHHHHHHHHHHHHCc
Confidence            99997  45665544332  2356788888999999754

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=96.83  E-value=0.02  Score=45.24  Aligned_cols=105  Identities=14%  Similarity=-0.021  Sum_probs=73.9

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIGM  114 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~vM  114 (165)
                      -.+.+|.|....||++...++.++||+......        ...|...|...|+.+..  |..++-+ +.++.....++|
T Consensus        10 ~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~--------~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v~   79 (256)
T cd05039          10 LGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST--------AAQAFLAEASVMTTLRH--PNLVQLLGVVLQGNPLYIVT   79 (256)
T ss_pred             ceeeeecCCCceEEEEEecCcEEEEEEeccchh--------HHHHHHHHHHHHHhcCC--cceeeeEEEEcCCCCeEEEE
Confidence            456788898899999998755999998752211        45788889888887753  3333222 345678889999


Q ss_pred             ecCCCCchHHHHHHHcCC---C----CHHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGI---K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~---~----~~~~a~~iG~~La~~h~~t  152 (165)
                      |+++  ...|.+.+....   .    .-.++.++...|+.+|...
T Consensus        80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~  122 (256)
T cd05039          80 EYMA--KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN  122 (256)
T ss_pred             EecC--CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9998  347777765543   1    1357788888888888765

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=96.82  E-value=0.024  Score=45.24  Aligned_cols=104  Identities=18%  Similarity=0.016  Sum_probs=70.0

Q ss_pred             ecCCCceeEEEEEEeC---CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGS---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vM  114 (165)
                      ++|.|....||++...   .+ .++||...+...      ....++...|+.+|+.+..  |..++-+-.+..+...+||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~ii~~~~~~~~~~~~lv~   73 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE------KSVRDEMMREAEIMHQLDN--PYIVRMIGVCEAEALMLVM   73 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccC------hHHHHHHHHHHHHHHhcCC--CCeEEEEEEEcCCCeEEEE
Confidence            4788999999987653   33 588887754321      2234677788888887643  5545444455667788999


Q ss_pred             ecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++  ...|.+.+....  ..    -.++.+|...|+.+|...
T Consensus        74 e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  115 (257)
T cd05115          74 EMAS--GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN  115 (257)
T ss_pred             EeCC--CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            9997  346777765322  11    256788888899888764

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=96.77  E-value=0.018  Score=48.89  Aligned_cols=108  Identities=19%  Similarity=0.137  Sum_probs=70.9

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      .++.+|.|....||++.+. +| .+.||.-...-.    ...-...+...|.++|+....  | ++++++.  .+.....
T Consensus         5 ~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~~~E~~il~~l~h--p-~iv~~~~~~~~~~~~~   77 (377)
T cd05629           5 TVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM----FKKDQLAHVKAERDVLAESDS--P-WVVSLYYSFQDAQYLY   77 (377)
T ss_pred             EeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH----HHhHHHHHHHHHHHHHHhCCC--C-CcceEEEEEEcCCeeE
Confidence            4678999999999999876 44 788997542111    011234566778888776532  3 4455543  3566788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  ...|.+.+.....++     .++.++...|..+|...
T Consensus        78 lv~E~~~--gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~g  121 (377)
T cd05629          78 LIMEFLP--GGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLG  121 (377)
T ss_pred             EEEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  346777776655432     25667888888888753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=96.75  E-value=0.033  Score=44.27  Aligned_cols=105  Identities=18%  Similarity=0.078  Sum_probs=71.5

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vM  114 (165)
                      -.+.+|.|....||++...++ .+++|.-.+.        ....++...|.++|+.+..  |..++-...+......++|
T Consensus        10 ~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~--------~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~v~   79 (260)
T cd05073          10 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--------SMSVEAFLAEANVMKTLQH--DKLVKLHAVVTKEPIYIIT   79 (260)
T ss_pred             EEeEecCccceEEEEEEecCCccEEEEecCCC--------hhHHHHHHHHHHHHHhcCC--CCcceEEEEEcCCCeEEEE
Confidence            567899999999999987665 6777754321        1234677788888887753  5555544444447789999


Q ss_pred             ecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++ + ..|.+.+...  ...     -.++.+|...|+-+|...
T Consensus        80 e~~~-~-~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~  122 (260)
T cd05073          80 EFMA-K-GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN  122 (260)
T ss_pred             EeCC-C-CcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9997 3 3676766542  211     246678999999998654

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=96.74  E-value=0.025  Score=46.89  Aligned_cols=110  Identities=11%  Similarity=-0.007  Sum_probs=73.4

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~  112 (165)
                      +..+|.|....||++.+. +| .++||.........    .-..++...|.+.+.....+--..+.+++.  .+.+...+
T Consensus         4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~l   79 (324)
T cd05589           4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA----RDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCF   79 (324)
T ss_pred             EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEE
Confidence            567899999999999875 34 79999865332111    123467778888887766553334444443  45677899


Q ss_pred             EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++ + ..|...+..+....    .++.+|...|+-+|...
T Consensus        80 v~E~~~-~-~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~  121 (324)
T cd05589          80 VMEYAA-G-GDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENK  121 (324)
T ss_pred             EEcCCC-C-CcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998 3 46666665544332    46778888888888654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=96.71  E-value=0.024  Score=46.96  Aligned_cols=106  Identities=13%  Similarity=0.044  Sum_probs=69.7

Q ss_pred             ecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vM  114 (165)
                      .+|.|....||++.+.. + .++||.........    .-..++...|.++|+..... | ++++++.  .+.....+||
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~il~~~~~h-p-~i~~~~~~~~~~~~~~lv~   75 (321)
T cd05591           2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ----DDDVDCTMTEKRILALAAKH-P-FLTALHCCFQTKDRLFFVM   75 (321)
T ss_pred             ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh----hhHHHHHHHHHHHHHhccCC-C-CccceeeEEEcCCeEEEEE
Confidence            47888889999998763 4 78999865432111    12345667788887655332 3 4444443  3667788999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++  ...|...+.+....     ..++.+|...|..+|...
T Consensus        76 E~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  116 (321)
T cd05591          76 EYVN--GGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHG  116 (321)
T ss_pred             eCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  34676766655433     246778888899999753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=96.65  E-value=0.033  Score=47.20  Aligned_cols=108  Identities=16%  Similarity=0.091  Sum_probs=71.0

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      .++.||.|....||++.+.. + .++||.-...--..    .-...+...|.++|+.+..  | ++++++  +.+.+...
T Consensus         5 ~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~il~~l~h--~-~iv~~~~~~~~~~~~~   77 (376)
T cd05598           5 KIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLM----RNQAAHVKAERDILAEADN--E-WVVKLYYSFQDKDNLY   77 (376)
T ss_pred             EEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHh----hhhHHHHHHHHHHHHhCCC--C-CcceEEEEEEcCCEEE
Confidence            47889999999999998763 4 78888754221100    1123566778888877643  3 334444  33567778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  ...|.+.+.+....+     .++.+|...|+.+|...
T Consensus        78 lv~E~~~--~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~  121 (376)
T cd05598          78 FVMDYIP--GGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMG  121 (376)
T ss_pred             EEEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  357777776654332     24667888888888644

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=96.65  E-value=0.059  Score=42.59  Aligned_cols=105  Identities=18%  Similarity=0.073  Sum_probs=69.2

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCCceEE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HFDRTMSLIG  113 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~~~~~~v  113 (165)
                      -.+.+|.|....||++...++ .+++|.....        ..+.+....|.++|+.+..  |..++-.. +.+.+...++
T Consensus         8 ~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~--------~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~iv   77 (256)
T cd05114           8 FMKELGSGQFGVVHLGKWRAQIKVAIKAINEG--------AMSEEDFIEEAKVMMKLSH--PKLVQLYGVCTQQKPLYIV   77 (256)
T ss_pred             EeeEecCCcCceEEEEEeccCceEEEEecccC--------CccHHHHHHHHHHHHHCCC--CCceeEEEEEccCCCEEEE
Confidence            356799999999999988766 7888864311        2334567788888887753  55444332 3344566799


Q ss_pred             EecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++  ...|.+.+...  ...    -.++.++...|+.+|...
T Consensus        78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  120 (256)
T cd05114          78 TEFME--NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS  120 (256)
T ss_pred             EEcCC--CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99997  33566666532  222    246777888888888654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=96.64  E-value=0.028  Score=46.63  Aligned_cols=108  Identities=14%  Similarity=0.051  Sum_probs=70.2

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~  112 (165)
                      +..+|.|....||++.+.. + .++||.-..-...    ..-...+...|.++++....  +..++.++.  .+.+...+
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~--~~~i~~~~~~~~~~~~~~l   78 (323)
T cd05616           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI----QDDDVECTMVEKRVLALSGK--PPFLTQLHSCFQTMDRLYF   78 (323)
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhccC--CCeEeeEEEEEecCCEEEE
Confidence            5678999999999998763 4 7888876532211    11234556667777665432  445555544  35566779


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++ + ..|...+.....+     -.++.+|...|+-+|...
T Consensus        79 v~E~~~-~-g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  121 (323)
T cd05616          79 VMEYVN-G-GDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKG  121 (323)
T ss_pred             EEcCCC-C-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998 3 4666666554332     247788899999999653

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=96.62  E-value=0.032  Score=46.38  Aligned_cols=109  Identities=15%  Similarity=0.042  Sum_probs=70.8

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      -++.+|.|....||++.+.. | .++||.-......    ..-...+...|.++|+...  .|..++-. ++.+.+...+
T Consensus         5 ~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~--h~~iv~~~~~~~~~~~~~l   78 (333)
T cd05600           5 ILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLF----KLNEVRHVLTERDILTTTK--SEWLVKLLYAFQDDEYLYL   78 (333)
T ss_pred             EEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHh----hhhHHHHHHHHHHHHHhCC--CCCCccEEEEEEcCCEEEE
Confidence            46789999999999998863 4 7889976532210    0112345667888877664  24444333 2335566789


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  +..|.+.+...... .    .++.+|...|+.+|...
T Consensus        79 v~e~~~--g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  121 (333)
T cd05600          79 AMEYVP--GGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELG  121 (333)
T ss_pred             EEeCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  45777777654432 2    35678888888888643

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=96.59  E-value=0.031  Score=47.00  Aligned_cols=108  Identities=19%  Similarity=0.166  Sum_probs=71.6

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      -++.||.|....||++.+. +| .++||.-..-- .. .  .-...+...|.++|+....  |. +++++  +.+.....
T Consensus         5 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~-~--~~~~~~~~~E~~il~~l~h--~~-iv~~~~~~~~~~~~~   77 (364)
T cd05599           5 SIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSE-ML-E--KEQVAHVRAERDILAEADN--PW-VVKLYYSFQDENYLY   77 (364)
T ss_pred             EEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHH-hh-h--hhHHHHHHHHHHHHHhCCC--CC-CcceEEEEEcCCeEE
Confidence            3678999999999999886 34 78889764211 00 0  1123456678888887752  33 33443  34677788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  ...|.+.+..+..++     .++.+|...|.-+|...
T Consensus        78 lv~E~~~--~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~  121 (364)
T cd05599          78 LIMEYLP--GGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLG  121 (364)
T ss_pred             EEECCCC--CcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  347777777655432     35667888888888653

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=96.58  E-value=0.029  Score=46.68  Aligned_cols=108  Identities=15%  Similarity=0.044  Sum_probs=70.9

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~  112 (165)
                      ...+|.|....||++.+. +| .++||.-......    ..-...+...|.++++....  +..++.++.  .+.+...+
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~--~~~i~~~~~~~~~~~~~~l   78 (323)
T cd05615           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI----QDDDVECTMVEKRVLALQDK--PPFLTQLHSCFQTVDRLYF   78 (323)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhccC--CCchhheeeEEecCCEEEE
Confidence            467899999999999876 44 7889975422111    11234567778777765532  445665543  35566789


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  ...|...+......     ..++.+|...|+-+|...
T Consensus        79 v~Ey~~--~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~  121 (323)
T cd05615          79 VMEYVN--GGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRG  121 (323)
T ss_pred             EEcCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  34666666553322     246778888899999754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=96.56  E-value=0.039  Score=44.73  Aligned_cols=106  Identities=19%  Similarity=0.180  Sum_probs=70.4

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~  112 (165)
                      .+.+|.|....||++.+.. + .+++|+-.... ...   .-..++...|++.|+.+.  .|. +++++.  .+.....+
T Consensus         6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~---~~~~~~~~~e~~~l~~l~--h~~-i~~~~~~~~~~~~~~~   78 (290)
T cd05580           6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAK-IVK---LKQVEHVLNEKRILQSIR--HPF-LVNLYGSFQDDSNLYL   78 (290)
T ss_pred             EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHH-hhh---hhHHHHHHHHHHHHHhCC--CCC-ccceeeEEEcCCeEEE
Confidence            5678889999999998763 4 78888754211 000   122467778888888776  344 444443  46667789


Q ss_pred             EEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~  151 (165)
                      |||+++  ...|.+.+......+     .++.+|...|..+|..
T Consensus        79 v~e~~~--~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~  120 (290)
T cd05580          79 VMEYVP--GGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL  120 (290)
T ss_pred             EEecCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999997  246777775554322     3567888888888864

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=96.56  E-value=0.084  Score=42.52  Aligned_cols=108  Identities=12%  Similarity=0.022  Sum_probs=69.5

Q ss_pred             eEecCCCceeEEEEEEeC--CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-------c
Q 048614           37 IKEVGDGNLNFVYIVVGS--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-------D  106 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-------D  106 (165)
                      ++.+|.|....||++.+.  +| .++||........  .+   ...+...|.+.|+.+..+.-.++++++.+       +
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~--~~---~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE--EG---MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC--CC---chHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            567899999999999873  34 6888865433221  11   12345568888887766543455666543       2


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+|||+++.   .+.+.+....   ..    -.++.+|...|+.+|...
T Consensus        81 ~~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~  130 (290)
T cd07862          81 ETKLTLVFEHVDQ---DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR  130 (290)
T ss_pred             CCcEEEEEccCCC---CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3456899999972   4555554321   11    357888899999999654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=96.56  E-value=0.06  Score=42.60  Aligned_cols=105  Identities=19%  Similarity=0.092  Sum_probs=71.0

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      -++.+|.|..+.||++...++ .+++|+-.+-        ....++...|..+|+.+..  |..++-. +..+.+...++
T Consensus        10 ~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~--------~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv   79 (261)
T cd05072          10 LVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG--------TMSVQAFLEEANLMKTLQH--DKLVRLYAVVTKEEPIYII   79 (261)
T ss_pred             EeeecCCcCCceEEEEEecCCceEEEEEccCC--------chhHHHHHHHHHHHHhCCC--CCeeeEEEEEcCCCCcEEE
Confidence            468899999999999987766 7888874321        1235677888888887642  4433332 34566777899


Q ss_pred             EecCCCCchHHHHHHHc--CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIA--GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~--g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ..+|++.+..  +...     -.++.++...|+.+|...
T Consensus        80 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~  123 (261)
T cd05072          80 TEYMA--KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN  123 (261)
T ss_pred             EecCC--CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99997  3467666643  2221     246678888899898654

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=96.55  E-value=0.053  Score=43.93  Aligned_cols=107  Identities=11%  Similarity=-0.063  Sum_probs=64.4

Q ss_pred             cCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEEe
Q 048614           40 VGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIGMR  115 (165)
Q Consensus        40 l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~vME  115 (165)
                      +|.|....||++.+. +| .+.||...+....    ..-...+...|...++......-..++.++.+  +.+...+|||
T Consensus         2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   77 (279)
T cd05633           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK----MKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILD   77 (279)
T ss_pred             cccCCCeEEEEEEECCCCcEEEEEEEEccccc----cchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEe
Confidence            678888999999886 34 7888866532210    01112233444455555543322334554433  4567789999


Q ss_pred             cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |++  ...|...+......     -.++.++...|+.+|...
T Consensus        78 ~~~--~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~  117 (279)
T cd05633          78 LMN--GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRF  117 (279)
T ss_pred             cCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            998  34676666554322     246788888899999654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=96.54  E-value=0.049  Score=43.98  Aligned_cols=110  Identities=18%  Similarity=0.155  Sum_probs=68.9

Q ss_pred             eEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC-c
Q 048614           37 IKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTM-S  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~-~  110 (165)
                      .+.+|.|....||++.+.    +| .+++|.-..-..   .......++...|..+|+.+... |..++-...|..+. .
T Consensus         5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~---~~~~~~~~~~~~e~~~l~~l~~~-~~i~~~~~~~~~~~~~   80 (290)
T cd05613           5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATI---VQKAKTTEHTRTERQVLEHIRQS-PFLVTLHYAFQTDTKL   80 (290)
T ss_pred             eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhh---hhcchHHHHHHHHHHHHHhcccC-CChhceeeEeecCCeE
Confidence            467899999999999873    45 788887432110   11233446777888888776542 44444333443333 4


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+|||+++  ...|.+.+......     ..++.+|...|+.+|...
T Consensus        81 ~lv~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~  125 (290)
T cd05613          81 HLILDYIN--GGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLG  125 (290)
T ss_pred             EEEEecCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            59999997  34677777654432     234457888888888754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=96.54  E-value=0.032  Score=44.29  Aligned_cols=110  Identities=15%  Similarity=0.006  Sum_probs=69.3

Q ss_pred             eEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~v  113 (165)
                      .+.+|.|....||++.+.+| .++||+........ ..-.-...+...|.+.|+.+..  | .+++++.  .+.....++
T Consensus         5 ~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~-~~~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           5 GEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNV-LAAEKEYEKLQEEVDLLKSLKH--V-NIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             cceEeccCCeEEEEEEEcCCCeEEEEEeecCccch-hhHHHHHHHHHHHHHHHHhcCC--C-CEeeEeeEeecCCeEEEE
Confidence            45678899999999988766 78999755321100 0000012345567777776653  3 3334443  366778999


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|++.+.+....     ..++.++...|+.+|...
T Consensus        81 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  122 (265)
T cd06631          81 MEFVP--GGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNC  122 (265)
T ss_pred             EecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99997  35777777663322     245678888888888654

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=96.50  E-value=0.046  Score=45.39  Aligned_cols=106  Identities=17%  Similarity=0.091  Sum_probs=68.5

Q ss_pred             ecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vM  114 (165)
                      .+|.|....||++.+.+ + .++||.........    .-...+...|.++|+..... |. +++++.  .+.+...+||
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~h-p~-iv~~~~~~~~~~~~~lv~   75 (316)
T cd05619           2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM----DDDVECTMVEKRVLSLAWEH-PF-LTHLYCTFQTKENLFFVM   75 (316)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----cchHHHHHHHHHHHHhccCC-Cc-CcceEEEEEeCCEEEEEE
Confidence            57888888999998764 4 79999876543211    12235667787777654222 33 333333  3556677999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++  ...|...+......     ..++.+|...|+.+|...
T Consensus        76 ey~~--~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~  116 (316)
T cd05619          76 EYLN--GGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKG  116 (316)
T ss_pred             eCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9997  34677777654322     246778888888888764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=96.48  E-value=0.039  Score=45.78  Aligned_cols=110  Identities=14%  Similarity=0.083  Sum_probs=70.1

Q ss_pred             eeEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 048614           36 TIKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~  108 (165)
                      -++.+|.|....||+|...    .| .+.+|.......   .+.....++...|..+|+.+... | .++.++.  .+..
T Consensus         4 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~~~e~~~l~~l~~~-~-~i~~~~~~~~~~~   78 (332)
T cd05614           4 LLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAAL---VQKAKTVEHTRTERNVLEHVRQS-P-FLVTLHYAFQTEA   78 (332)
T ss_pred             EEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHH---hhhhhHHHHHHHHHHHHHhccCC-C-CcccEEEEEecCC
Confidence            3577899999999999863    34 677887542211   11123456778888888776532 3 3344433  3445


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++ + ..|.+.+..+...     -.++.+|...|+-+|...
T Consensus        79 ~~~lv~e~~~-~-g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  125 (332)
T cd05614          79 KLHLILDYVS-G-GEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLG  125 (332)
T ss_pred             EEEEEEeCCC-C-CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5679999998 3 4566666554433     235668888899998653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=96.48  E-value=0.04  Score=46.01  Aligned_cols=106  Identities=15%  Similarity=0.049  Sum_probs=68.1

Q ss_pred             ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEe
Q 048614           39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIGMR  115 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~vME  115 (165)
                      .+|.|....||++.+. +| .++||.........    .-...+...|..+|+....  |..++-. .+.+.+...+|||
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h--p~iv~~~~~~~~~~~~~lv~E   75 (328)
T cd05593           2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIA----KDEVAHTLTESRVLKNTRH--PFLTSLKYSFQTKDRLCFVME   75 (328)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhCCC--CCCcceEEEEEcCCEEEEEEe
Confidence            5788999999999876 44 79999865432111    1223566677777766533  4443332 3345667789999


Q ss_pred             cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |++ + ..|...+......     ..++.+|...|+-+|...
T Consensus        76 y~~-~-g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~  115 (328)
T cd05593          76 YVN-G-GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGK  115 (328)
T ss_pred             CCC-C-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            997 3 3565666554332     246778888899998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=96.48  E-value=0.035  Score=46.21  Aligned_cols=106  Identities=13%  Similarity=0.029  Sum_probs=68.5

Q ss_pred             ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEe
Q 048614           39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIGMR  115 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~vME  115 (165)
                      .+|.|....||++.+. +| .+++|+-.......    .-...+...|.++|+....  |..++-. .+.+.+...+|||
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h--p~i~~~~~~~~~~~~~~lv~E   75 (323)
T cd05595           2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA----KDEVAHTVTESRVLQNTRH--PFLTALKYAFQTHDRLCFVME   75 (323)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hHHHHHHHHHHHHHHhCCC--CCCcceeeEEecCCEEEEEEe
Confidence            5788889999999875 44 79999876433211    1223455667777776543  4333332 2345567789999


Q ss_pred             cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |++  ...|...+......     -.++.+|...|+-+|...
T Consensus        76 ~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  115 (323)
T cd05595          76 YAN--GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD  115 (323)
T ss_pred             CCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            998  34666666555432     246678888888888753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=96.44  E-value=0.073  Score=42.71  Aligned_cols=108  Identities=16%  Similarity=0.147  Sum_probs=68.6

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF---  105 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---  105 (165)
                      .+++ -++.+|.|..+.||++.+.. + .+++|.-.+...        ..++...|...++.+... | .+++++.+   
T Consensus        17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--------~~~~~~~e~~~l~~l~~h-~-~i~~~~~~~~~   86 (286)
T cd06638          17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD--------IDEEIEAEYNILKALSDH-P-NVVKFYGMYYK   86 (286)
T ss_pred             ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc--------hHHHHHHHHHHHHHHhcC-C-Ceeeeeeeeee
Confidence            3455 55789999999999998763 4 788886432211        124566787777776432 3 44555543   


Q ss_pred             ----cCCCceEEEecCCCCchHHHHHHH----cCCCCH-----HHHHHHHHHHHHHHhc
Q 048614          106 ----DRTMSLIGMRYLEPPHIILRKGLI----AGIKYP-----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       106 ----D~~~~~~vMEdL~~~~~~lr~~l~----~g~~~~-----~~a~~iG~~La~~h~~  151 (165)
                          +.+...++|||++  ..+|.+.+.    .+...+     .++.++...|.-+|..
T Consensus        87 ~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  143 (286)
T cd06638          87 KDVKNGDQLWLVLELCN--GGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN  143 (286)
T ss_pred             cccCCCCeEEEEEeecC--CCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC
Confidence                3356799999997  345555443    222222     3777888888888864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=96.43  E-value=0.038  Score=45.93  Aligned_cols=109  Identities=16%  Similarity=0.046  Sum_probs=69.0

Q ss_pred             eEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCc
Q 048614           37 IKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~  110 (165)
                      ++.+|.|....||++...    .+ .++||.-..-.-.   .......+...|.++|+.+..  |..++-. .+.+....
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~~~E~~il~~l~h--p~iv~~~~~~~~~~~~   75 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV---RNQKDTAHTKAERNILEAVKH--PFIVDLIYAFQTGGKL   75 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH---hhhhhHHHHHHHHHHHHhCCC--CchhceeeEEecCCeE
Confidence            357889999999999863    23 6888875421100   111233566778888887753  5444433 23345567


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      .+||||++  ...|.+.+......+     .++.+|...|..+|...
T Consensus        76 ~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (323)
T cd05584          76 YLILEYLS--GGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQG  120 (323)
T ss_pred             EEEEeCCC--CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            89999997  346777776554332     35667888888888754

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=96.43  E-value=0.071  Score=42.07  Aligned_cols=103  Identities=13%  Similarity=-0.060  Sum_probs=70.1

Q ss_pred             eEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEec
Q 048614           37 IKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRY  116 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEd  116 (165)
                      .+.+|.|....||++...+..+++|.-...         ...++...|..+|+.+..  |..++-.-.+..+...++|||
T Consensus        11 ~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~---------~~~~~~~~e~~~l~~~~~--~~i~~~~~~~~~~~~~~v~e~   79 (254)
T cd05083          11 GEIIGEGEFGAVLQGEYTGQKVAVKNIKCD---------VTAQAFLEETAVMTKLHH--KNLVRLLGVILHNGLYIVMEL   79 (254)
T ss_pred             eeeeccCCCCceEecccCCCceEEEeecCc---------chHHHHHHHHHHHHhCCC--CCcCeEEEEEcCCCcEEEEEC
Confidence            467888888899998765558999975321         233567778888876653  555555444555667899999


Q ss_pred             CCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614          117 LEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       117 L~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++  ...|.+.+....   ..    -.++.++...|+.+|...
T Consensus        80 ~~--~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  120 (254)
T cd05083          80 MS--KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK  120 (254)
T ss_pred             CC--CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            97  346666665422   11    236778899999999654

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=96.42  E-value=0.05  Score=42.85  Aligned_cols=104  Identities=17%  Similarity=0.091  Sum_probs=67.3

Q ss_pred             EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEE
Q 048614           38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~v  113 (165)
                      +.+|.|....||++.+. +| .+++|.......      .-...+...|.++|+.+..  |.. ++++  ..+.....+|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~i-~~~~~~~~~~~~~~lv   71 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLP------PDLKAKFLQEARILKQYSH--PNI-VRLIGVCTQKQPIYIV   71 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCC------HHHHHHHHHHHHHHHhCCC--CCc-ceEEEEEcCCCCeEEE
Confidence            35788888999999875 44 788886542221      1123567778888877642  443 3343  3466667899


Q ss_pred             EecCCCCchHHHHHHHc-CC-CC----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIA-GI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~-g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|.+.+.. +. ..    -.++.++...|+-+|...
T Consensus        72 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  114 (252)
T cd05084          72 MELVQ--GGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH  114 (252)
T ss_pred             Eeecc--CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99997  3477776644 32 22    246778888888888654

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=96.41  E-value=0.043  Score=45.58  Aligned_cols=106  Identities=13%  Similarity=0.039  Sum_probs=68.0

Q ss_pred             ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEe
Q 048614           39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIGMR  115 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~vME  115 (165)
                      .+|.|....||++.+. +| .++||.-..-.-..    .-...+...|.++|+....  |..+.-. ++.+.+...+|||
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~h--p~i~~~~~~~~~~~~~~lv~e   75 (323)
T cd05571           2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA----KDEVAHTLTESRVLQNTRH--PFLTALKYSFQTHDRLCFVME   75 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hHHHHHHHHHHHHHHhCCC--CCCCCEEEEEEcCCEEEEEEe
Confidence            5788999999999875 44 78999765322110    1223466678777766542  4433333 3345566779999


Q ss_pred             cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |++ + ..|...+......     ..++.+|...|+-+|...
T Consensus        76 ~~~-~-~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  115 (323)
T cd05571          76 YAN-G-GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCD  115 (323)
T ss_pred             CCC-C-CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            998 3 4666666654433     235678888899898764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=96.41  E-value=0.14  Score=41.84  Aligned_cols=111  Identities=16%  Similarity=0.138  Sum_probs=73.5

Q ss_pred             CCCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEc
Q 048614           31 KFDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFD  106 (165)
Q Consensus        31 ~~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D  106 (165)
                      ....+ .++.+|.|..+.||++.+. ++ .+.+|.-..      .. .-..++...|.++|+....  |..++-. ++.+
T Consensus        18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~------~~-~~~~~~~~~e~~~l~~~~h--~~v~~~~~~~~~   88 (296)
T cd06654          18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL------QQ-QPKKELIINEILVMRENKN--PNIVNYLDSYLV   88 (296)
T ss_pred             cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEec------CC-cchHHHHHHHHHHHHhCCC--CCEeeEEEEEEe
Confidence            34455 5667999999999999865 34 788886431      11 1234677788888876533  4444433 3456


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+||||++  ...|.+.+..+...    ..++.++...|+.+|...
T Consensus        89 ~~~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~g  136 (296)
T cd06654          89 GDELWVVMEYLA--GGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ  136 (296)
T ss_pred             CCEEEEeecccC--CCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            778899999997  34666666544322    356678888999998765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=96.41  E-value=0.056  Score=45.08  Aligned_cols=108  Identities=14%  Similarity=0.062  Sum_probs=71.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      -.+.+|.|....||++... +| .++||.....--..    .-..++...|..+|+.+..  |. +.+++  +.+.+...
T Consensus        22 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h--p~-iv~~~~~~~~~~~~~   94 (329)
T PTZ00263         22 MGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILK----MKQVQHVAQEKSILMELSH--PF-IVNMMCSFQDENRVY   94 (329)
T ss_pred             EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hhhHHHHHHHHHHHHhCCC--CC-CCcEEEEEEcCCEEE
Confidence            4678999999999999876 34 79999865321100    1123567778888877642  33 33333  45777889


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      ++|||+. + ..|.+.+.+....+     .++.+|...|+-+|...
T Consensus        95 lv~e~~~-~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  138 (329)
T PTZ00263         95 FLLEFVV-G-GELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKD  138 (329)
T ss_pred             EEEcCCC-C-ChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997 3 46767776654332     34567888888888754

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=96.40  E-value=0.092  Score=41.91  Aligned_cols=108  Identities=17%  Similarity=0.090  Sum_probs=71.1

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~  112 (165)
                      ++.+|.|....||++.+. +| .+++|.-.....      .-...+...|...++.+.......+.+++.  .+.....+
T Consensus         6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l   79 (277)
T cd06917           6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP------DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI   79 (277)
T ss_pred             hhheeccCCceEEEEEEcCCCcEEEEEEecCCCC------chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence            456888999999999875 44 788886432111      123456677888888876533233333333  45566789


Q ss_pred             EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++  ...|.+.+..+...    -.++.++...|+.+|...
T Consensus        80 v~e~~~--~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~  121 (277)
T cd06917          80 IMEYAE--GGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVG  121 (277)
T ss_pred             EEecCC--CCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997  34777777666433    246778888888888754

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=96.39  E-value=0.09  Score=42.36  Aligned_cols=107  Identities=13%  Similarity=0.082  Sum_probs=65.9

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC--
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTM--  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~--  109 (165)
                      ....+|.|....||++.+. +| .++||....-...     .-...+...|.++|+.+... |. +++++.  .+.+.  
T Consensus         5 ~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~-----~~~~~~~~~E~~~l~~l~~~-~~-i~~~~~~~~~~~~~~   77 (295)
T cd07837           5 KLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE-----EGIPPTALREISLLQMLSES-IY-IVRLLDVEHVEEKNG   77 (295)
T ss_pred             EeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc-----cCCchHHHHHHHHHHHccCC-CC-ccceeeeEeecCCCC
Confidence            4567898999999999876 45 7999975432211     11224567788888877442 33 333332  22222  


Q ss_pred             ---ceEEEecCCCCchHHHHHHHcC-----CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          110 ---SLIGMRYLEPPHIILRKGLIAG-----IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ---~~~vMEdL~~~~~~lr~~l~~g-----~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                         ..++|||++ .  .+++.+...     ..+     -.++.+|...|+-+|...
T Consensus        78 ~~~~~lv~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~  130 (295)
T cd07837          78 KPSLYLVFEYLD-S--DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG  130 (295)
T ss_pred             CceEEEEeeccC-c--CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               479999998 2  455555431     111     246788888888888654

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=96.37  E-value=0.094  Score=41.67  Aligned_cols=104  Identities=17%  Similarity=0.102  Sum_probs=70.5

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~  112 (165)
                      -.+.+|.|....||.+...++ .+.||+....        ..+.++...|...|+.+..  | .+++++.+  +.+...+
T Consensus         8 ~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~--------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~l   76 (256)
T cd05113           8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG--------SMSEDEFIEEAKVMMKLSH--E-KLVQLYGVCTKQRPIYI   76 (256)
T ss_pred             EeeEecCcccceEEEEEecCCCcEEEEEcCCC--------cccHHHHHHHHHHHhcCCC--C-CeeeEEEEEccCCCcEE
Confidence            457789999899999987655 6888985421        1234567778888876642  4 44455543  3445689


Q ss_pred             EEecCCCCchHHHHHHHcCC-C-C----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGI-K-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~-~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++  ...|++.+.... . .    -.++.+|...|+.+|...
T Consensus        77 v~e~~~--~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  120 (256)
T cd05113          77 VTEYMS--NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ  120 (256)
T ss_pred             EEEcCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997  346777776532 1 1    257888999999998654

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=96.37  E-value=0.055  Score=45.62  Aligned_cols=108  Identities=14%  Similarity=0.048  Sum_probs=70.2

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      .++.+|.|....||++... .| .++||.-.......    .-...+...|..+|..+..  |. +++++  +.+.+...
T Consensus         5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~~--~~-iv~~~~~~~~~~~~~   77 (360)
T cd05627           5 SLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLE----KEQVAHIRAERDILVEADG--AW-VVKMFYSFQDKRNLY   77 (360)
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhh----hhhHHHHHHHHHHHHhCCC--CC-EeeEEEEEEcCCEEE
Confidence            4678999999999999876 34 78888654221110    1234567778887766532  33 33333  33566779


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|.+.+.+....+     .++.+|...|..+|...
T Consensus        78 lv~E~~~--gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~g  121 (360)
T cd05627          78 LIMEFLP--GGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLG  121 (360)
T ss_pred             EEEeCCC--CccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  347777776544332     35677888888888654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=96.37  E-value=0.053  Score=42.38  Aligned_cols=105  Identities=17%  Similarity=0.080  Sum_probs=69.6

Q ss_pred             eEecCCCceeEEEEEEeCC-----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCC
Q 048614           37 IKEVGDGNLNFVYIVVGSS-----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRT  108 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~  108 (165)
                      .+.+|.|....||++....     + .+++|...+...     + -...+...|.+.|+.+..  |. +.+++  ..+..
T Consensus         4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-----~-~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~   74 (258)
T smart00219        4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD-----E-QQIEEFLREARIMRKLDH--PN-IVKLLGVCTEEE   74 (258)
T ss_pred             cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC-----h-HHHHHHHHHHHHHHhcCC--Cc-hheEEEEEcCCC
Confidence            3578899999999998864     2 688898753321     1 134567778888877732  44 34444  34456


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCC---C----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIK---Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~---~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...++||+++ + ..+.+.+.....   .    ..++.++...|+.+|...
T Consensus        75 ~~~~i~e~~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~  123 (258)
T smart00219       75 PLMIVMEYME-G-GDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN  123 (258)
T ss_pred             eeEEEEeccC-C-CCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            8889999997 3 466666654332   1    357778888888888664

Phosphotransferases. Tyrosine-specific kinase subfamily.

>PHA02988 hypothetical protein; Provisional

Probab=96.36  E-value=0.038  Score=45.07  Aligned_cols=107  Identities=14%  Similarity=0.103  Sum_probs=72.5

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c----CCC
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D----RTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D----~~~  109 (165)
                      +...++.|....||+....+..++||.-...-..    -..-.++...|...|+.+..  | ++.+++.+  |    ...
T Consensus        24 ~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~E~~~l~~l~h--~-nIv~~~g~~~~~~~~~~~   96 (283)
T PHA02988         24 TSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKG----HKVLIDITENEIKNLRRIDS--N-NILKIYGFIIDIVDDLPR   96 (283)
T ss_pred             CCeEEeeCCceEEEEEEECCEEEEEEeccccccc----cHHHHHHHHHHHHHHHhcCC--C-CEEEEeeeEEecccCCCc
Confidence            4456788888899999986558999976532211    01113566788888887743  4 55666654  2    235


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ..++|||++  ...|++.+.+....     -.++.++...|+.+|..
T Consensus        97 ~~lv~Ey~~--~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~  141 (283)
T PHA02988         97 LSLILEYCT--RGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKY  141 (283)
T ss_pred             eEEEEEeCC--CCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence            679999998  45788877665432     35777889999999964

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=96.34  E-value=0.049  Score=45.24  Aligned_cols=106  Identities=14%  Similarity=0.070  Sum_probs=67.9

Q ss_pred             ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vM  114 (165)
                      .+|.|....||++.+. ++ .+.||.-..-.-..    .-..++...|.+.|+..... |. +++++.  .+.+...+||
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~h-~~-iv~~~~~~~~~~~~~iv~   75 (320)
T cd05590           2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ----DDDVECTMTEKRILSLARNH-PF-LTQLYCCFQTPDRLFFVM   75 (320)
T ss_pred             eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh----ccHHHHHHHHHHHHHhccCC-Cc-hhceeeEEEcCCEEEEEE
Confidence            5788889999999876 34 68888755322110    12345666777777655332 33 333433  3556678999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++  ...|...+......     ..++.+|...|+-+|...
T Consensus        76 Ey~~--~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~  116 (320)
T cd05590          76 EFVN--GGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKG  116 (320)
T ss_pred             cCCC--CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9997  35777766654432     246678888899888754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=96.34  E-value=0.039  Score=45.98  Aligned_cols=106  Identities=10%  Similarity=0.015  Sum_probs=67.9

Q ss_pred             ecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~vM  114 (165)
                      .+|.|....||++.+.. + .+.||.........    .-...+...|..+++..... | .++.++.+  +.....+||
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~~~~~~~~-~-~i~~~~~~~~~~~~~~lv~   75 (327)
T cd05617           2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD----DEDIDWVQTEKHVFEQASSN-P-FLVGLHSCFQTTSRLFLVI   75 (327)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhhcCC-C-CEeeEEEEEEeCCEEEEEE
Confidence            57889999999998764 3 68888876432110    11234566777777655332 3 34444432  556677999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++  ...|...+......     ..++.+|...|+-+|...
T Consensus        76 e~~~--~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~  116 (327)
T cd05617          76 EYVN--GGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERG  116 (327)
T ss_pred             eCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9997  34666666554332     247788889999999754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=96.34  E-value=0.094  Score=41.54  Aligned_cols=105  Identities=24%  Similarity=0.160  Sum_probs=69.9

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vM  114 (165)
                      -++.+|.|....||++...++ .+++|.-...        ....++...|...|+.+..  |..++-.-.+..+...++|
T Consensus        10 ~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~--------~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~v~   79 (260)
T cd05067          10 LVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQG--------SMSPEAFLAEANLMKQLQH--PRLVRLYAVVTQEPIYIIT   79 (260)
T ss_pred             eeeeeccCccceEEeeecCCCceEEEEEecCC--------CCcHHHHHHHHHHHHhcCC--cCeeeEEEEEccCCcEEEE
Confidence            367899999999999998776 8998864311        1334677788888887753  4333332233456789999


Q ss_pred             ecCCCCchHHHHHHHc--CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIA--GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~--g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |++.  ...|.+.+..  +...     -.++.++...|..+|...
T Consensus        80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~  122 (260)
T cd05067          80 EYME--NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN  122 (260)
T ss_pred             EcCC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            9997  3466666644  2221     245678888889888654

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=96.32  E-value=0.075  Score=44.26  Aligned_cols=105  Identities=20%  Similarity=0.145  Sum_probs=71.6

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      .+..+|.|....||++.+. .| .+++|.-.....      +....+...|.+.|+.+..  |. +.+++  +.+.+...
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~   79 (331)
T cd06649           9 RISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK------PAIRNQIIRELQVLHECNS--PY-IVGFYGAFYSDGEIS   79 (331)
T ss_pred             EEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC------HHHHHHHHHHHHHHHHCCC--CC-CCeEEEEEEECCEEE
Confidence            5678999999999999887 34 677787653221      1123567788888877642  43 33344  34667789


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +||||++  ...|.+.+......     ..++.++...|+-+|..
T Consensus        80 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~  122 (331)
T cd06649          80 ICMEHMD--GGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK  122 (331)
T ss_pred             EEeecCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            9999997  45777777654432     24667888888888853

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=96.32  E-value=0.077  Score=42.06  Aligned_cols=104  Identities=17%  Similarity=0.131  Sum_probs=68.2

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~  112 (165)
                      -.+.+|.|....||++.+.++ .++||.-.+.-        ........|.+.|+.+..  |. +++++  ..+.....+
T Consensus        10 ~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~--------~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~l   78 (261)
T cd05068          10 LLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT--------MDPKDFLAEAQIMKKLRH--PK-LIQLYAVCTLEEPIYI   78 (261)
T ss_pred             eEEEecccCCccEEEEEecCCeEEEEEeeCCCc--------ccHHHHHHHHHHHHHCCC--CC-ccceeEEEecCCCeee
Confidence            357889888889999987655 78888754211        123445667777776642  43 33344  334455678


Q ss_pred             EEecCCCCchHHHHHHHcCC--C-----CHHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGI--K-----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~--~-----~~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ..+|.+.+....  .     ...++.++...|+.+|...
T Consensus        79 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  123 (261)
T cd05068          79 VTELMK--YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN  123 (261)
T ss_pred             eeeccc--CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999996  357777765422  1     2367788888899988653

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=96.31  E-value=0.051  Score=43.64  Aligned_cols=106  Identities=18%  Similarity=0.062  Sum_probs=68.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      .+..+|.|....||++.+. .+ .++||.-..      ..+.-...+...|..+|+...   ...+++++.+  +.....
T Consensus         8 ~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~------~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~   78 (277)
T cd06640           8 KLERIGKGSFGEVFKGIDNRTQQVVAIKIIDL------EEAEDEIEDIQQEITVLSQCD---SPYVTKYYGSYLKGTKLW   78 (277)
T ss_pred             hhhhcccCCCeEEEEEEEccCCEEEEEEEEec------cccHHHHHHHHHHHHHHHhCC---CCCEeeEEEEEEECCEEE
Confidence            4567899999999999875 34 788886431      111122356666777776553   3344555443  556789


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|++.+..+....    .++.++...|+.+|...
T Consensus        79 lv~e~~~--~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~  121 (277)
T cd06640          79 IIMEYLG--GGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEK  121 (277)
T ss_pred             EEEecCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998  356777776665432    45667777788887554

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=96.29  E-value=0.036  Score=46.06  Aligned_cols=107  Identities=17%  Similarity=0.148  Sum_probs=70.4

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      -++.+|.|....||++.+. +| .++||.-.......    .-...+...|.++|+....  |. +++++  +.|.+...
T Consensus         5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~--~~-i~~~~~~~~~~~~~~   77 (350)
T cd05573           5 VIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK----RNQIAHVRAERDILADADS--PW-IVKLYYSFQDEEHLY   77 (350)
T ss_pred             EEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh----ccHHHHHHHHHHHHHhcCC--CC-ccchhhheecCCeEE
Confidence            3578899999999999987 34 78999765322110    1223456677777776652  33 33332  34667788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +||||++  ...|.+.+.+....     -.++.+|...|+.+|..
T Consensus        78 lv~e~~~--~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~  120 (350)
T cd05573          78 LVMEYMP--GGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL  120 (350)
T ss_pred             EEEcCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  34677777665332     23667888899999974

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=96.29  E-value=0.081  Score=41.63  Aligned_cols=105  Identities=16%  Similarity=0.115  Sum_probs=70.0

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~  112 (165)
                      .+.+|.|....||++... ++ .+++|.-..      ..+.........|.++|+....  | .+++++  ..+.+...+
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~------~~~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~i   76 (267)
T cd06610           6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDL------EKCQTSVDELRKEVQAMSQCNH--P-NVVKYYTSFVVGDELWL   76 (267)
T ss_pred             eeeecCCCCeEEEEEEEcCCCcEEEEEEecc------CCcchHHHHHHHHHHHHHhcCC--C-CEEEEEEEEeeCCEEEE
Confidence            567888999999999865 34 788886431      1222355677888888876643  3 333333  456788889


Q ss_pred             EEecCCCCchHHHHHHHcCC----CC----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGI----KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~----~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ...+.+.+.+..    ..    ..++.+|...|+-+|...
T Consensus        77 v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~  122 (267)
T cd06610          77 VMPYLS--GGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG  122 (267)
T ss_pred             EEeccC--CCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997  335666665421    12    246788889999998654

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=96.28  E-value=0.12  Score=40.79  Aligned_cols=103  Identities=20%  Similarity=0.191  Sum_probs=69.7

Q ss_pred             eEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~v  113 (165)
                      .+.+|.|....||++.+.++ .++||.-.+-        ..+.++...|..+|+.+..  | .+++++.+  +.....++
T Consensus        11 ~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~--------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~~v   79 (261)
T cd05034          11 ERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG--------TMSPEAFLQEAQIMKKLRH--D-KLVQLYAVCSEEEPIYIV   79 (261)
T ss_pred             eeeeccCcceEEEEEEEcCCceEEEEEecCC--------ccCHHHHHHHHHHHhhCCC--C-CEeeeeeeeecCCceEEE
Confidence            46788888899999987755 7888875421        1344677788888877652  3 44555443  33678899


Q ss_pred             EecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ..+|.+.+.+..  ..     ..++.++...|+.+|...
T Consensus        80 ~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~  123 (261)
T cd05034          80 TEYMS--KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN  123 (261)
T ss_pred             EeccC--CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99997  457777775532  11     356778888888888654

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=96.27  E-value=0.047  Score=45.24  Aligned_cols=106  Identities=12%  Similarity=0.027  Sum_probs=68.6

Q ss_pred             ecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vM  114 (165)
                      .+|.|....||++.+.. + .++||.-..-.-..    .-..++...|.++|+....  ..++++++.  .+.+...+||
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~il~~~~~--h~~i~~~~~~~~~~~~~~lv~   75 (318)
T cd05570           2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ----DDDVECTMTEKRVLALAGK--HPFLTQLHSCFQTKDRLFFVM   75 (318)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hhHHHHHHHHHHHHHhccC--CCCccceeeEEEcCCEEEEEE
Confidence            57888889999998763 4 78888754322111    1234566678788776542  234555554  4677789999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ||++  +..|...+.+.... .    .++.+|...|+-+|...
T Consensus        76 e~~~--~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~  116 (318)
T cd05570          76 EYVN--GGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERG  116 (318)
T ss_pred             cCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9997  34666666655332 2    35677888888888643

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=96.25  E-value=0.053  Score=44.75  Aligned_cols=105  Identities=12%  Similarity=0.098  Sum_probs=68.3

Q ss_pred             cCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEec
Q 048614           40 VGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIGMRY  116 (165)
Q Consensus        40 l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~vMEd  116 (165)
                      +|.|....||++.+.. + .+++|........    -.....+...|.++|+.+.  .|..++-. ++.+.+...+||||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~----~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e~   74 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIV----SRSEVTHTLAERTVLAQVN--CPFIVPLKFSFQSPEKLYLVLAF   74 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhCC--CCcEeceeeEEecCCeEEEEEcC
Confidence            5778888999998863 4 7888875422111    0123456777888887764  25555543 23466778899999


Q ss_pred             CCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          117 LEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       117 L~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ++  ...|.+.+.....+     ..++.+|...|..+|...
T Consensus        75 ~~--~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  113 (312)
T cd05585          75 IN--GGELFHHLQREGRFDLSRARFYTAELLCALENLHKFN  113 (312)
T ss_pred             CC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            97  34676766554332     236678888898898754

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=96.25  E-value=0.066  Score=45.26  Aligned_cols=109  Identities=15%  Similarity=0.030  Sum_probs=68.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~~~~~  112 (165)
                      .++.+|.|....||++.+. .| .+.||.-.......    .-...+...|.++|+....  |..++-... .|.....+
T Consensus         5 ~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~il~~~~~--~~iv~~~~~~~~~~~~~l   78 (363)
T cd05628           5 SLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLE----KEQVGHIRAERDILVEADS--LWVVKMFYSFQDKLNLYL   78 (363)
T ss_pred             EeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH----hhHHHHHHHHHHHHHhCCC--CCcceEEEEEecCCeEEE
Confidence            4678999999999999876 34 78888754221110    1123466778888776642  333333322 34556779


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  ...|.+.+.+.... .    .++.+|...|.-+|...
T Consensus        79 v~E~~~--gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~g  121 (363)
T cd05628          79 IMEFLP--GGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLG  121 (363)
T ss_pred             EEcCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997  34677777654432 2    35667778888888653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=96.24  E-value=0.065  Score=44.42  Aligned_cols=106  Identities=16%  Similarity=0.087  Sum_probs=66.5

Q ss_pred             ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vM  114 (165)
                      .+|.|....||++.+. +| .++||.-..-....    .-.......|.++|...... | .+++++.  .+.....+||
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~~-~-~i~~~~~~~~~~~~~~lv~   75 (316)
T cd05620           2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI----DDDVECTMVEKRVLALAWEN-P-FLTHLYCTFQTKEHLFFVM   75 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----cchHHHHHHHHHHHHhccCC-C-CccCeeEEEEeCCEEEEEE
Confidence            5788888999999876 34 78888765432211    12334566677777544221 3 3344442  3556667999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ||++  +..|...+..+... .    .++.+|...|+-+|...
T Consensus        76 E~~~--~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  116 (316)
T cd05620          76 EFLN--GGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKG  116 (316)
T ss_pred             CCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9997  34666666554332 2    35678888899999653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=96.23  E-value=0.11  Score=40.61  Aligned_cols=104  Identities=18%  Similarity=0.015  Sum_probs=64.6

Q ss_pred             ecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEec
Q 048614           39 EVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIGMRY  116 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~vMEd  116 (165)
                      .+|.|....||++...++ .+++|.-..-..      .-...+...|.+.|+.+..  |..++-. +..+.....++|||
T Consensus         2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~   73 (250)
T cd05085           2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP------QELKIKFLSEARILKQYDH--PNIVKLIGVCTQRQPIYIVMEL   73 (250)
T ss_pred             ccCCCCCceEEEEEecCCcEEEEEecCCcCC------HHHHHHHHHHHHHHHhCCC--CCcCeEEEEEecCCccEEEEEC
Confidence            577888889999987766 788886432110      0112355667777776532  4433322 44566778899999


Q ss_pred             CCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          117 LEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       117 L~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++ + ..+.+.+....  ..    -.++.++...|..+|...
T Consensus        74 ~~-~-~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  113 (250)
T cd05085          74 VP-G-GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN  113 (250)
T ss_pred             CC-C-CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            97 3 46666654422  12    256677888888888653

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=96.22  E-value=0.043  Score=43.99  Aligned_cols=104  Identities=19%  Similarity=0.124  Sum_probs=68.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      -++.+|.|....||++.+. ++ .+++|......       .-..++...|.++|+.+.  .| .+++++  +.+.....
T Consensus         9 i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-------~~~~~~~~~e~~~l~~l~--h~-~i~~~~~~~~~~~~~~   78 (280)
T cd06611           9 IIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES-------EEELEDFMVEIDILSECK--HP-NIVGLYEAYFYENKLW   78 (280)
T ss_pred             HHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC-------HHHHHHHHHHHHHHHhCC--CC-ceeEEEEEEecCCeEE
Confidence            3456889999999999876 34 78888764211       122345667888887775  23 344444  34667778


Q ss_pred             EEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +||||++  ...|...+.+. ...     -.++.++...|+.+|..
T Consensus        79 lv~e~~~--~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~  122 (280)
T cd06611          79 ILIEFCD--GGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH  122 (280)
T ss_pred             EEeeccC--CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999998  44666666542 221     24677788888888853

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=96.22  E-value=0.12  Score=41.22  Aligned_cols=106  Identities=16%  Similarity=0.093  Sum_probs=68.6

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      -++.+|.|....||++... +| .++||.......     ..-...+...|...|+.+..  |. +++++  +.++....
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~   75 (285)
T cd07861           4 KIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-----EEGVPSTAIREISLLKELQH--PN-IVCLQDVLMQESRLY   75 (285)
T ss_pred             EeeEecccCceEEEEEEECCCCcEEEEEEeccccc-----cCCchHHHHHHHHHHHhcCC--CC-EeeeEEEEeeCCeEE
Confidence            3567899999999999875 44 788886542211     11222456678888877752  33 33344  34778889


Q ss_pred             EEEecCCCCchHHHHHHHc----CCCCH----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIA----GIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~----g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++ .  .+.+.+..    +....    .++.+|...|+.+|...
T Consensus        76 ~v~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  121 (285)
T cd07861          76 LIFEFLS-M--DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR  121 (285)
T ss_pred             EEEecCC-C--CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997 2  45454433    22222    36888999999999753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=96.21  E-value=0.079  Score=41.96  Aligned_cols=108  Identities=11%  Similarity=0.024  Sum_probs=67.6

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      .+.+|.|....||++... ++ .++||....+...    -.-...+...|.+.|+.+..  |..++-+ ++.+.....++
T Consensus         7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~~v   80 (267)
T cd08228           7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMM----DAKARQDCVKEIDLLKQLNH--PNVIKYLDSFIEDNELNIV   80 (267)
T ss_pred             eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccC----CHHHHHHHHHHHHHHHhCCC--cceeeeeeeEEECCeEEEE
Confidence            467899999999999875 34 8999975432211    01122345668888877643  3333222 34466778899


Q ss_pred             EecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|+..+..    +...     -.++.+|...|+.+|...
T Consensus        81 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  126 (267)
T cd08228          81 LELAD--AGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR  126 (267)
T ss_pred             EEecC--CCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            99998  3356554432    1212     256778899999999653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=96.20  E-value=0.092  Score=40.81  Aligned_cols=107  Identities=20%  Similarity=0.151  Sum_probs=72.3

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      ++.++.|.-..||++.+.. + .+++|.-....     ...-...+...|.++++.+.  .|..++-. .+.+.+...++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~~~e~~~l~~l~--~~~~~~~~~~~~~~~~~~lv   77 (258)
T cd08215           5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSN-----MSEKEREDALNEVKILKKLN--HPNIIKYYESFEEKGKLCIV   77 (258)
T ss_pred             EeeeccCCCeEEEEEEEcCCCcEEEEEEeeccc-----CChHHHHHHHHHHHHHHhcC--CCChhheEEEEecCCEEEEE
Confidence            4678888888999999873 4 78888754211     11234456777888888776  35433322 45566888899


Q ss_pred             EecCCCCchHHHHHHHcC----CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAG----IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g----~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|++.+.+.    ...     ..++.++...|+.+|...
T Consensus        78 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~  123 (258)
T cd08215          78 MEYAD--GGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK  123 (258)
T ss_pred             EEecC--CCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99997  45777777652    221     357888888999999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=96.19  E-value=0.11  Score=40.27  Aligned_cols=106  Identities=18%  Similarity=0.035  Sum_probs=71.7

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcC--CCce
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDR--TMSL  111 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~--~~~~  111 (165)
                      .+.++.|....||++.+. ++ .+++|.......     ++-..++...|.+.++.+.  .|..++-. ...+.  ....
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~~   77 (260)
T cd06606           5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-----SEEELEALEREIRILSSLQ--HPNIVRYYGSERDEEKNTLN   77 (260)
T ss_pred             eeEeeecCceEEEEEEECCCCcEEEEEEeecccc-----chHHHHHHHHHHHHHHHcC--CCCEeeEEEEEecCCCCeEE
Confidence            466788888899999887 45 899998753321     1334577788888888776  35444433 22233  4578


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ++||+.+  ..+|.+.+.+....     -.++.++...|+.+|..
T Consensus        78 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~  120 (260)
T cd06606          78 IFLEYVS--GGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN  120 (260)
T ss_pred             EEEEecC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999996  45788877665422     25777888888888864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=96.18  E-value=0.013  Score=54.79  Aligned_cols=107  Identities=18%  Similarity=0.137  Sum_probs=74.2

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF---  105 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---  105 (165)
                      +..| ..+.+|-|----|||..+. .| .|-||++.+..      ...+.+|...|.++|+.+.-  |.. -+.+..   
T Consensus        12 ~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~------~~r~~e~~~~EieilkKLnh--~NI-Vk~f~iee~   82 (732)
T KOG4250|consen   12 NYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES------SLRPRERWCREIEILKKLNH--PNI-VKLFDIEET   82 (732)
T ss_pred             CcceeehhhhcCCccceeeeecccccccchhHHhhhhhc------ccchHHHHHHHHHHHHHcCc--hhh-hhhcccCCc
Confidence            3455 6677886666669999854 56 89999999876      24788999999999999872  221 111211   


Q ss_pred             -----cCCCceEEEecCCCCchHHHHHHHcCCC--------CHHHHHHHHHHHHHHH
Q 048614          106 -----DRTMSLIGMRYLEPPHIILRKGLIAGIK--------YPLLAEHMSEFMAKTL  149 (165)
Q Consensus       106 -----D~~~~~~vMEdL~~~~~~lr~~l~~g~~--------~~~~a~~iG~~La~~h  149 (165)
                           --..-+++|||++  +..||..|.+.+.        +-.+..+++..|-.+|
T Consensus        83 ~~~~~~~~~~vlvmEyC~--gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr  137 (732)
T KOG4250|consen   83 KFLGLVTRLPVLVMEYCS--GGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR  137 (732)
T ss_pred             cccCcccccceEEEeecC--CCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH
Confidence                 2345689999998  5699999998763        2235556666666665

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=96.17  E-value=0.15  Score=41.38  Aligned_cols=105  Identities=12%  Similarity=0.072  Sum_probs=70.2

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      .++.+|.|....||++.+. ++ .+++|+-.....      .-...+...|..+|+.+..  | .+.+++  +.+.....
T Consensus         9 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~   79 (288)
T cd07871           9 KLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE------EGAPCTAIREVSLLKNLKH--A-NIVTLHDIIHTERCLT   79 (288)
T ss_pred             EeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc------CCcchhHHHHHHHHHhCCC--C-CEeeEEEEEcCCCeEE
Confidence            4788999999999999876 34 788897642211      1123466778888877643  3 344454  33556678


Q ss_pred             EEEecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++ +  .|.+.+.. +...     ..++.+|...|+-+|...
T Consensus        80 lv~e~~~-~--~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  123 (288)
T cd07871          80 LVFEYLD-S--DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK  123 (288)
T ss_pred             EEEeCCC-c--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997 2  56666644 2222     246788999999999754

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=96.17  E-value=0.072  Score=44.16  Aligned_cols=106  Identities=15%  Similarity=0.055  Sum_probs=67.2

Q ss_pred             ecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~vM  114 (165)
                      .+|.|....||++...+ + .++||.-..-...    -.-..++...|.+.|...... | ++++++.+  +.+...+||
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~h-p-~i~~~~~~~~~~~~~~lv~   75 (316)
T cd05592           2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL----EDDDVECTMVERRVLALAWEH-P-FLTHLFCTFQTKEHLFFVM   75 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhhHHHHHHHHHHHHhccCC-C-CccceeeEEEcCCEEEEEE
Confidence            57889999999998763 4 6888976533211    112344556677776543222 2 34444433  556778999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++  ...|...+......     ..++.+|...|+-+|...
T Consensus        76 e~~~--gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~  116 (316)
T cd05592          76 EYLN--GGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKG  116 (316)
T ss_pred             cCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9997  34666666554332     236778888888898754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=96.17  E-value=0.091  Score=41.59  Aligned_cols=104  Identities=18%  Similarity=0.154  Sum_probs=69.0

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~  112 (165)
                      -.+.+|.|....||++....+ .+++|...+.        ....++...|.+.|+.+..  | .+++++.+  +.....+
T Consensus         8 ~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~--------~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~l   76 (256)
T cd05059           8 FLKELGSGQFGVVHLGKWRGKIDVAIKMIREG--------AMSEDDFIEEAKVMMKLSH--P-NLVQLYGVCTKQRPIFI   76 (256)
T ss_pred             hhhhhccCCCceEEEeEecCCccEEEEEeccC--------CCCHHHHHHHHHHHHhCCC--C-CEEEEEEEEcCCCceEE
Confidence            456788898899999987655 7888864321        1234566678888876642  3 45555533  4455679


Q ss_pred             EEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++  ...|.+.+.... ..     -.++.+|...|+.+|...
T Consensus        77 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  120 (256)
T cd05059          77 VTEYMA--NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG  120 (256)
T ss_pred             EEecCC--CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  346777775422 11     247788899999998754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=96.13  E-value=0.079  Score=43.73  Aligned_cols=105  Identities=15%  Similarity=0.121  Sum_probs=66.6

Q ss_pred             EecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCc
Q 048614           38 KEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMS  110 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~  110 (165)
                      +.+|.|....||+|...    .| .+++|.-....-.     .....+...|.++|+.+..  |..+ +++.  .+....
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--~niv-~~~~~~~~~~~~   73 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-----VRDRVRTKMERDILAEVNH--PFIV-KLHYAFQTEGKL   73 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-----hhhHHHHHHHHHHHHhCCC--CCcc-cEEEEEEcCCEE
Confidence            56888888999998752    34 6888865422110     1223466678887776642  4433 3433  355667


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+||||++ + ..|.+.+.+....     -.++.+|...|+.+|...
T Consensus        74 ~lv~e~~~-~-~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  118 (318)
T cd05582          74 YLILDFLR-G-GDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG  118 (318)
T ss_pred             EEEEcCCC-C-CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            79999997 3 4666666554332     246788899999999754

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=96.12  E-value=0.095  Score=41.73  Aligned_cols=105  Identities=16%  Similarity=0.068  Sum_probs=68.5

Q ss_pred             eEecCCCceeEEEEEEeC-----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc----
Q 048614           37 IKEVGDGNLNFVYIVVGS-----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD----  106 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D----  106 (165)
                      ++.+|.|..+.||++...     .+ .++||...+...      .....+...|.+.|+.+.   -..+++++.+.    
T Consensus         9 ~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~------~~~~~~~~~ei~~l~~l~---~~~i~~~~~~~~~~~   79 (284)
T cd05038           9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGE------EQHRSDFEREIEILRTLD---HENIVKYKGVCEKPG   79 (284)
T ss_pred             heeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccc------hHHHHHHHHHHHHHHhCC---CCChheEEeeeecCC
Confidence            467899999999999753     24 788998653321      112345666666666553   23455665543    


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....++||+++  ...|++.+....  ..    -.++.+|...|+.+|...
T Consensus        80 ~~~~~lv~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~  129 (284)
T cd05038          80 GRSLRLIMEYLP--SGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR  129 (284)
T ss_pred             CCceEEEEecCC--CCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            336789999997  347777775533  11    357788889999999654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=96.11  E-value=0.089  Score=43.34  Aligned_cols=105  Identities=16%  Similarity=0.165  Sum_probs=67.7

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC-----
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR-----  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~-----  107 (165)
                      .+.+|.|....||++.+. +| .++||.-......     .....+...|.++|+.+..  |..+ +++.+  +.     
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--pniv-~~~~~~~~~~~~~~   76 (338)
T cd07859           5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH-----VSDATRILREIKLLRLLRH--PDIV-EIKHIMLPPSRREF   76 (338)
T ss_pred             EEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc-----chhHHHHHHHHHHHHhCCC--CCEe-eecceEeccCCCCC
Confidence            467889999999999876 44 8999975432211     1223567788888877642  3322 23222  11     


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ....+|||+++.   .+.+.+.++...     -.++.+|...|+-+|...
T Consensus        77 ~~~~lv~e~~~~---~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  123 (338)
T cd07859          77 KDIYVVFELMES---DLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTAN  123 (338)
T ss_pred             ceEEEEEecCCC---CHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            235899999972   466666554332     247788899999999765

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=96.10  E-value=0.039  Score=45.02  Aligned_cols=108  Identities=19%  Similarity=0.134  Sum_probs=70.2

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      .++.+|.|....||++.+. +| .++||+-...--.    -.-..++...|.++|+.+..  |. +.+++  ..|.....
T Consensus         5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~E~~~l~~l~h--p~-iv~~~~~~~~~~~~~   77 (291)
T cd05612           5 RIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVI----RLKQEQHVHNEKRVLKEVSH--PF-IIRLFWTEHDQRFLY   77 (291)
T ss_pred             eeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHh----hhHHHHHHHHHHHHHHhCCC--Cc-HhhhHhhhccCCeEE
Confidence            3578899999999999886 34 7999976421100    00123456678888876643  32 33333  34566678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  ...|.+.+......     -.++.+|...|+.+|...
T Consensus        78 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  121 (291)
T cd05612          78 MLMEYVP--GGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKE  121 (291)
T ss_pred             EEEeCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  34677776654432     246778888999999764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=96.09  E-value=0.1  Score=42.82  Aligned_cols=105  Identities=18%  Similarity=0.091  Sum_probs=69.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      .++.+|.|....||++.+. +| .+++|.......      .-...+...|.++|+.+..  |..++-. ++.+.+...+
T Consensus         5 ~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~l   76 (308)
T cd06615           5 KLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK------PAIRNQIIRELKVLHECNS--PYIVGFYGAFYSDGEISI   76 (308)
T ss_pred             EEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC------HHHHHHHHHHHHHHHhCCC--CCCCeEEEEEeeCCEEEE
Confidence            4567899999999999876 44 677776543221      1123456778888887743  4333322 4457788899


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHh
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~  150 (165)
                      +|||++  ...|.+.+......     ..++.+|...|+.+|.
T Consensus        77 v~ey~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~  117 (308)
T cd06615          77 CMEHMD--GGSLDQVLKKAGRIPENILGKISIAVLRGLTYLRE  117 (308)
T ss_pred             EeeccC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999997  34777766553322     3577888889999995

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=96.06  E-value=0.087  Score=43.97  Aligned_cols=106  Identities=11%  Similarity=0.000  Sum_probs=67.2

Q ss_pred             ecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~vM  114 (165)
                      .+|.|....||++.+.. + .+.+|........    -.-...+...|..+|...... |..+ .++  +.+.....+||
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~E~~~l~~~~~h-p~iv-~~~~~~~~~~~~~lv~   75 (329)
T cd05618           2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVN----DDEDIDWVQTEKHVFEQASNH-PFLV-GLHSCFQTESRLFFVI   75 (329)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhc----chhHHHHHHHHHHHHHhcCCC-CcCC-ceeeEEEeCCEEEEEE
Confidence            57889999999998763 4 7888886643321    112344566777776654332 3333 333  34567788999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ||++  ...|...+...... .    .++.+|...|.-+|...
T Consensus        76 E~~~--~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~  116 (329)
T cd05618          76 EYVN--GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG  116 (329)
T ss_pred             eCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  34666666554332 2    36678888888888764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=96.05  E-value=0.12  Score=41.66  Aligned_cols=107  Identities=16%  Similarity=0.039  Sum_probs=68.8

Q ss_pred             eeEecCCCceeEEEEEEe-----CCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--
Q 048614           36 TIKEVGDGNLNFVYIVVG-----SSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR--  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~-----~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--  107 (165)
                      .++.+|.|....||++..     ..+ .+++|+..+...   .   -..++...|..+|+.+..  |..++-.-.+..  
T Consensus         8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~---~---~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~   79 (284)
T cd05079           8 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---G---NHIADLKKEIEILRNLYH--ENIVKYKGICTEDG   79 (284)
T ss_pred             hceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc---H---HHHHHHHHHHHHHHhCCC--CCeeeeeeEEecCC
Confidence            567899999999999873     234 799998654322   1   123567778888877643  444443222222  


Q ss_pred             -CCceEEEecCCCCchHHHHHHHcCC-C-C----HHHHHHHHHHHHHHHhcc
Q 048614          108 -TMSLIGMRYLEPPHIILRKGLIAGI-K-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 -~~~~~vMEdL~~~~~~lr~~l~~g~-~-~----~~~a~~iG~~La~~h~~t  152 (165)
                       ....++|||++  ...|.+.+.+.. . .    -.++.+|...|+.+|...
T Consensus        80 ~~~~~lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g  129 (284)
T cd05079          80 GNGIKLIMEFLP--SGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ  129 (284)
T ss_pred             CCceEEEEEccC--CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             44679999997  347777665432 1 1    256778888888888654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=96.04  E-value=0.13  Score=42.12  Aligned_cols=108  Identities=17%  Similarity=0.092  Sum_probs=68.0

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~~~~  111 (165)
                      .++.+|.|...-||++.... + .++||.-.......    .-...+...|.++|+....  | .+++++..-  .....
T Consensus         5 ~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~----~~~~~~~~~e~~~l~~~~~--~-~i~~~~~~~~~~~~~~   77 (305)
T cd05609           5 TIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL----RNQIQQVFVERDILTFAEN--P-FVVSMFCSFETKRHLC   77 (305)
T ss_pred             EeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh----HHHHHHHHHHHHHHHhCCC--C-CeeeeEEEEecCCEEE
Confidence            45788999999999998763 3 79999654332100    0112455667777776543  3 455555433  33348


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ++|||++  +..|.+.+......     ..++.++...|+-+|...
T Consensus        78 lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  121 (305)
T cd05609          78 MVMEYVE--GGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYG  121 (305)
T ss_pred             EEEecCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  35677777554332     234567778888888765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=96.03  E-value=0.078  Score=45.17  Aligned_cols=108  Identities=16%  Similarity=0.096  Sum_probs=70.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      .++.||.|....||++.+. ++ .++||.-...--..    .-...+...|.++|+....  | ++++++  +.+.+...
T Consensus         5 ~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~----~~~~~~~~~E~~il~~l~h--~-~iv~l~~~~~~~~~~~   77 (381)
T cd05626           5 KIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLN----RNQVAHVKAERDILAEADN--E-WVVKLYYSFQDKDNLY   77 (381)
T ss_pred             EEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hHHHHHHHHHHHHHHhcCC--C-CeeeeEEEEecCCEEE
Confidence            5788999999999999875 34 78888764221000    1123466778888876542  3 344433  34567788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  ...|.+.+......+     .++.+|...|..+|...
T Consensus        78 lv~E~~~--gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~g  121 (381)
T cd05626          78 FVMDYIP--GGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMG  121 (381)
T ss_pred             EEEecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998  346666666554332     34667888888888755

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=96.03  E-value=0.094  Score=43.71  Aligned_cols=106  Identities=9%  Similarity=-0.024  Sum_probs=67.3

Q ss_pred             ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vM  114 (165)
                      .+|.|....||++.+. ++ .+.||.-......    -.-...+...|..+|+..... |. ++.++.  .+.....+||
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~----~~~~~~~~~~e~~il~~~~~h-p~-Iv~~~~~~~~~~~~~lv~   75 (329)
T cd05588           2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVN----DDEDIDWVQTEKHVFETASNH-PF-LVGLHSCFQTESRLFFVI   75 (329)
T ss_pred             eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhccCC-CC-CCceEEEEEcCCEEEEEE
Confidence            5788888999999876 34 7888876532211    112345566777777765432 33 333343  3566779999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ||++  ...|...+.+.... .    .++.+|...|+-+|...
T Consensus        76 e~~~--~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  116 (329)
T cd05588          76 EFVS--GGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERG  116 (329)
T ss_pred             eCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  34666666554332 2    46678888888888754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=96.02  E-value=0.094  Score=41.14  Aligned_cols=102  Identities=14%  Similarity=0.013  Sum_probs=62.8

Q ss_pred             ecCCCceeEEEEEEeCCCe------------EEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc
Q 048614           39 EVGDGNLNFVYIVVGSSGS------------FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD  106 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~gs------------vIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D  106 (165)
                      .+|.|..+.||++.+.+.+            +++|.    .+..  ...  ..+...|+..|+.+..  |..++-+-.+-
T Consensus         2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~----~~~~--~~~--~~~~~~e~~~l~~l~h--~~i~~~~~~~~   71 (259)
T cd05037           2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKV----LGSD--HRD--SLAFFETASLMSQLSH--KHLVKLYGVCV   71 (259)
T ss_pred             cccccccceEEEEEEeccCCccccCCccceeeeeec----cccc--hhh--HHHHHHHHHHHHcCCC--cchhheeeEEe
Confidence            4788888899999886332            33332    2211  111  4566677777766532  44443332222


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+|||+++  ...|.+.+.... ..     -.++.+|...|+.+|...
T Consensus        72 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  121 (259)
T cd05037          72 RDENIMVEEYVK--FGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK  121 (259)
T ss_pred             cCCcEEEEEcCC--CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            267899999998  357877776543 21     246778899999999653

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=96.01  E-value=0.21  Score=40.01  Aligned_cols=108  Identities=15%  Similarity=0.028  Sum_probs=68.4

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------C
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-------R  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------~  107 (165)
                      ++.+|.|....||++.+. +| .+++|........  .   -...+...|.+.++.+..+--..+.+++.+-       .
T Consensus         5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~--~---~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~   79 (288)
T cd07863           5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE--D---GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE   79 (288)
T ss_pred             eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC--C---CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence            567899999999999876 34 7899976543221  1   1123455688888877655333445555331       2


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ....++||+++.   .++..+....  ..     -.++.+|...|.-+|...
T Consensus        80 ~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  128 (288)
T cd07863          80 TKVTLVFEHVDQ---DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC  128 (288)
T ss_pred             ceEEEEEccccc---CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            335799999982   5555554421  11     246778888899898654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=95.99  E-value=0.067  Score=43.15  Aligned_cols=109  Identities=17%  Similarity=0.147  Sum_probs=68.5

Q ss_pred             eEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-CCCc
Q 048614           37 IKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-RTMS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-~~~~  110 (165)
                      .+.+|.|....||++...    ++ .+.||...... .  .......++...|..+|+.+... |..++-...+. ....
T Consensus         5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~-~--~~~~~~~~~~~~E~~~l~~~~~~-~~i~~~~~~~~~~~~~   80 (288)
T cd05583           5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKAT-I--VQKAKTAEHTRTERQVLEAVRRC-PFLVTLHYAFQTDTKL   80 (288)
T ss_pred             EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHH-H--HhhhhHHHHHHHHHHHHHhccCC-cchhhhheeeecCCEE
Confidence            467899999999998753    33 68888754211 1  11233446777888888877542 44444333333 3445


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~  151 (165)
                      .+||||++ + ..|.+.+..+... .    ..+.++...|+.+|..
T Consensus        81 ~lv~e~~~-~-~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~  124 (288)
T cd05583          81 HLILDYVN-G-GELFTHLYQREHFTESEVRVYIAEIVLALDHLHQL  124 (288)
T ss_pred             EEEEecCC-C-CcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence            59999997 3 4666766654432 2    3566888888888864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=95.97  E-value=0.1  Score=43.62  Aligned_cols=100  Identities=15%  Similarity=0.093  Sum_probs=65.2

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhcc-CCCCCc-------eEEEEcC
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQL-CPDHVP-------EVYHFDR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~-~p~~vP-------~v~~~D~  107 (165)
                      .+..+ .|.-|-||+|.+++|..|+|.-.           .+.+|......++..+++- .|..+|       ..+..+.
T Consensus        11 ~v~~i-~~~~~~v~~v~T~~G~~~Lk~~~-----------~~~~~l~~~~~~~~~L~~~G~~~~~~~~~t~~G~~~~~~~   78 (309)
T TIGR02904        11 QPEEM-EQVTGKLFKVYTDQGVFALKKLY-----------ADRNTIESFVSQIQVLSEKGFSRIVPVYPTKDGSYYLFHG   78 (309)
T ss_pred             Cceee-ecccCcEEEEEeCCCCEEEEEec-----------cchHhHHHHHHHHHHHHHcCCCcCCceeecCCCCeeeEEC
Confidence            34444 33456789999998899999865           1235777888888777552 222222       2333444


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLY  156 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~  156 (165)
                      +...++|++++ +.        .....+.-+.++|+.||++|..+..+.
T Consensus        79 ~~~~~L~~wi~-G~--------~~~~~~~~~~~~~~~LA~lH~~~~~~~  118 (309)
T TIGR02904        79 HFLYYLMPWLD-IE--------RNEERNYQHESMFQELALLHRKTVKTE  118 (309)
T ss_pred             CEEEEEeCCcc-cc--------cccCCHHHHHHHHHHHHHHHHhhhCCC
Confidence            55578899998 31        111223568999999999999998744

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=95.96  E-value=0.11  Score=42.25  Aligned_cols=106  Identities=14%  Similarity=0.060  Sum_probs=66.9

Q ss_pred             eeEecCCCceeEEEEEEeCC-----------------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCC
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-----------------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPD   97 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-----------------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~   97 (165)
                      -.+.+|.|..-.||++...+                 + .+.||+..+....      -...+...|.+.|+.+..  | 
T Consensus         9 ~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~E~~~l~~l~h--~-   79 (304)
T cd05096           9 FKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANK------NARNDFLKEVKILSRLKD--P-   79 (304)
T ss_pred             eeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCH------HHHHHHHHHHHHHhhcCC--C-
Confidence            34678999999999987532                 2 4777876543211      112345567777765532  3 


Q ss_pred             CCceEE--EEcCCCceEEEecCCCCchHHHHHHHcCCC------------------------CHHHHHHHHHHHHHHHhc
Q 048614           98 HVPEVY--HFDRTMSLIGMRYLEPPHIILRKGLIAGIK------------------------YPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus        98 ~vP~v~--~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~------------------------~~~~a~~iG~~La~~h~~  151 (165)
                      .+.+++  +.+.+...++|||++  ...|.+.+.....                        ...++.+|...|+-+|..
T Consensus        80 niv~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~  157 (304)
T cd05096          80 NIIRLLGVCVDEDPLCMITEYME--NGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL  157 (304)
T ss_pred             CeeEEEEEEecCCceEEEEecCC--CCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence            344444  345677899999997  3466666544211                        125888999999999976


Q ss_pred             c
Q 048614          152 T  152 (165)
Q Consensus       152 t  152 (165)
                      .
T Consensus       158 ~  158 (304)
T cd05096         158 N  158 (304)
T ss_pred             C
Confidence            4

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=95.95  E-value=0.13  Score=40.23  Aligned_cols=103  Identities=18%  Similarity=0.088  Sum_probs=65.8

Q ss_pred             ecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCceEEEe
Q 048614           39 EVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSLIGMR  115 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~~vME  115 (165)
                      .+|.|....||++.+.++ .+++|......      ..-...+...|.++++.+..  | .++++  +..+.....++||
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~------~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~~v~e   72 (251)
T cd05041           2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTL------PPDLKRKFLQEAEILKQYDH--P-NIVKLIGVCVQKQPIYIVME   72 (251)
T ss_pred             ccccCCCceEEEEEEeCCCcEEEEeccccC------CHHHHHHHHHHHHHHHhCCC--C-CeEEEEEEEecCCCeEEEEE
Confidence            567788888999998756 89999654221      11123466677777776642  3 33344  3456677889999


Q ss_pred             cCCCCchHHHHHHHcC-C-CC----HHHHHHHHHHHHHHHhcc
Q 048614          116 YLEPPHIILRKGLIAG-I-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g-~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +++  ...|.+.+... . ..    -.++.++...|+.+|...
T Consensus        73 ~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~  113 (251)
T cd05041          73 LVP--GGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN  113 (251)
T ss_pred             cCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            997  34666666442 2 11    245667778888888544

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=95.94  E-value=0.16  Score=40.30  Aligned_cols=109  Identities=16%  Similarity=0.050  Sum_probs=68.7

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC--Cc
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT--MS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~--~~  110 (165)
                      .+.++.|....||++.+. +| .++||+.......  .+..-...+...|...|+.+..  |. +++++.+  |+.  ..
T Consensus         7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~~~~~~E~~~l~~l~h--~~-i~~~~~~~~~~~~~~~   81 (265)
T cd06652           7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPES--PETSKEVNALECEIQLLKNLLH--ER-IVQYYGCLRDPMERTL   81 (265)
T ss_pred             eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCC--cccHHHHHHHHHHHHHHHhcCC--CC-eeeEEeEeccCCCceE
Confidence            567888888899999875 34 7999976432211  1112223566678888876642  33 3344443  322  24


Q ss_pred             eEEEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      .++||+++  ...|++.+.+... .    -.++.++...|+.+|...
T Consensus        82 ~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  126 (265)
T cd06652          82 SIFMEHMP--GGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNM  126 (265)
T ss_pred             EEEEEecC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            47999997  4477777755332 2    357888999999999765

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=95.92  E-value=0.22  Score=39.79  Aligned_cols=105  Identities=14%  Similarity=0.114  Sum_probs=69.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      .++.++.|...-||++.+. +| .++||.......      .-..++...|.+.|+.+..   ..+++++.  .+.+...
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~   74 (284)
T cd07836           4 QLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE------EGTPSTAIREISLMKELKH---ENIVRLHDVIHTENKLM   74 (284)
T ss_pred             EeeeeccCCceEEEEEEECCCCeEEEEEEeccccc------ccchHHHHHHHHHHHhhcC---CCEeeeeeeEeeCCcEE
Confidence            4678899999999999986 45 789997653221      1223566778888877642   23444444  3566789


Q ss_pred             EEEecCCCCchHHHHHHHcCC----CC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI----KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~----~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++ +  .+.+.+....    ..    -.++.+|...|+.+|...
T Consensus        75 lv~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (284)
T cd07836          75 LVFEYMD-K--DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR  120 (284)
T ss_pred             EEEecCC-c--cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998 3  4555554322    12    246778888888888653

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=95.88  E-value=0.26  Score=39.25  Aligned_cols=105  Identities=13%  Similarity=0.151  Sum_probs=65.4

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcC--CCc
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDR--TMS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~--~~~  110 (165)
                      +..+|.|..+.||++.+. ++ .+++|+.......      ....+...|...|+..... |. +++++  +.|.  ...
T Consensus         4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~------~~~~~~~~e~~~l~~l~~h-~~-i~~~~~~~~~~~~~~~   75 (282)
T cd07831           4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKS------LEQVNNLREIQALRRLSPH-PN-ILRLIEVLFDRKTGRL   75 (282)
T ss_pred             EeeccccccceEEEEEEcCCCcEEEEEEehhccCC------chhhhHHHHHHHHhhcCCC-CC-ccceEEEEecCCCCcE
Confidence            567899999999999875 34 7888976533221      1122334576666655432 33 33333  3455  678


Q ss_pred             eEEEecCCCCchHHHHHHHcCC-C-C----HHHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGI-K-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~-~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      .+|||+++  . .+.+.+.+.. . .    -.++.+|...|..+|...
T Consensus        76 ~lv~e~~~--~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~  120 (282)
T cd07831          76 ALVFELMD--M-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG  120 (282)
T ss_pred             EEEEecCC--c-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999997  3 4555565422 2 2    246778888888888664

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=95.86  E-value=0.16  Score=39.51  Aligned_cols=103  Identities=16%  Similarity=0.089  Sum_probs=69.9

Q ss_pred             ecCCCceeEEEEEEeCC----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           39 EVGDGNLNFVYIVVGSS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      .+|.|....||++.+..    + .++||........     . ...+...|.+.++.+.  .|.. ++++  ..+.....
T Consensus         2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~-----~-~~~~~~~e~~~l~~~~--~~~i-~~~~~~~~~~~~~~   72 (262)
T cd00192           2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE-----E-ERKDFLKEARVMKKLG--HPNV-VRLLGVCTEEEPLY   72 (262)
T ss_pred             ccccCCceEEEEEEEecCCCCCceEEeEeeccccch-----h-HHHHHHHHHHHHhhcC--CCCh-heeeeeecCCCceE
Confidence            47788888999998863    4 7899987643321     1 4567778888888876  3433 3333  34567789


Q ss_pred             EEEecCCCCchHHHHHHHcC---------CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAG---------IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g---------~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ++|||++  ..+|.+.+...         ...     -.++.++...|+.+|...
T Consensus        73 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~  125 (262)
T cd00192          73 LVLEYME--GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK  125 (262)
T ss_pred             EEEEecc--CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            9999996  34777777664         221     257778888888888743

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=95.85  E-value=0.12  Score=40.47  Aligned_cols=107  Identities=20%  Similarity=0.097  Sum_probs=68.0

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      ...++.|...-||++... +| .+++|.-.... . .   .....+...|.+.|+.+..  |..++-. ++.+.....++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~-~---~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv   77 (256)
T cd08529           5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSK-M-N---RREREEAIDEARVLAKLDS--SYIIRYYESFLDKGKLNIV   77 (256)
T ss_pred             eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhh-C-C---HHHHHHHHHHHHHHHhcCC--CCeehheeeeccCCEEEEE
Confidence            456888888889999876 34 78888643211 0 0   2234566667777776542  3333322 33455678999


Q ss_pred             EecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++  ..+|++.+...  ...     -.++.++...|.-+|...
T Consensus        78 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~  121 (256)
T cd08529          78 MEYAE--NGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK  121 (256)
T ss_pred             EEeCC--CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99997  34777777653  222     246778888888888643

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=95.84  E-value=0.15  Score=42.63  Aligned_cols=104  Identities=17%  Similarity=0.129  Sum_probs=68.3

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~  111 (165)
                      .++.+|.|....||++.+.. | .+++|.......      ....++...|.+.|+.+..  |. ++++  ++.+.....
T Consensus         9 ~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~   79 (333)
T cd06650           9 KISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK------PAIRNQIIRELQVLHECNS--PY-IVGFYGAFYSDGEIS   79 (333)
T ss_pred             eeccccCCCCEEEEEEEECCCCcEEEEEEeecccC------HHHHHHHHHHHHHHHHCCC--Cc-ccceeEEEEECCEEE
Confidence            45678999999999998873 4 566665443221      1123566778888877642  33 3333  345777889


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHh
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~  150 (165)
                      +||||+.  ...|.+.+......     ..++.++...|+.+|.
T Consensus        80 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~  121 (333)
T cd06650          80 ICMEHMD--GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE  121 (333)
T ss_pred             EEEecCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999997  45777776553322     2466678888888885

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=95.82  E-value=0.16  Score=40.23  Aligned_cols=105  Identities=20%  Similarity=0.071  Sum_probs=65.9

Q ss_pred             ecCCCceeEEEEEEeC---CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGS---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vM  114 (165)
                      ++|.|....||++...   ++ .+.+|.......  .   +...+....|...|+....  |..++-+-.+..+...++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~--~---~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~lv~   74 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN--D---PALKDELLREANVMQQLDN--PYIVRMIGICEAESWMLVM   74 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCC--c---HHHHHHHHHHHHHHHhCCC--CCcceEEEEEcCCCcEEEE
Confidence            5788888899998532   33 788887542211  0   1122445667777766532  4444433344667788999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |+++  ...|.+.+......     -.++.++...|..+|...
T Consensus        75 e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~  115 (257)
T cd05116          75 ELAE--LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETN  115 (257)
T ss_pred             ecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  34676666554322     357778888888888764

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=95.82  E-value=0.072  Score=43.08  Aligned_cols=105  Identities=15%  Similarity=0.013  Sum_probs=63.5

Q ss_pred             cCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceEEEec
Q 048614           40 VGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DRTMSLIGMRY  116 (165)
Q Consensus        40 l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~~~~~~vMEd  116 (165)
                      +|.|....||++.+. +| .++||.-.......    .-..++...|.++|+.++.  |..++-...+ +.....+||||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~il~~l~~--~~i~~~~~~~~~~~~~~lv~e~   74 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKK----RKGYEGAMVEKRILAKVHS--RFIVSLAYAFQTKTDLCLVMTI   74 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhh----hHHHHHHHHHHHHHHhCCC--CcEeeeeEEEcCCCeEEEEEeC
Confidence            577888899999876 44 78888754321110    1123456678888876643  4333333333 34456799999


Q ss_pred             CCCCchHHHHHHHc----CC-CC----HHHHHHHHHHHHHHHhcc
Q 048614          117 LEPPHIILRKGLIA----GI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       117 L~~~~~~lr~~l~~----g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++  ...|+..+..    +. ..    -.++.+|...|+-+|...
T Consensus        75 ~~--~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  117 (280)
T cd05608          75 MN--GGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR  117 (280)
T ss_pred             CC--CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            97  3456554422    11 11    136778888898898753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=95.81  E-value=0.21  Score=39.03  Aligned_cols=107  Identities=16%  Similarity=0.073  Sum_probs=68.1

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      .++.+|.|....||++.+.. + .++||......-   .  .-...+...|.+.|+.+..  |..++-. .+.+.....+
T Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~--~~~~~~~~~e~~~l~~~~~--~~i~~~~~~~~~~~~~~l   76 (256)
T cd08220           4 KIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM---T--KDERLAAQNECQVLKLLSH--PNIIEYYENFLEDKALMI   76 (256)
T ss_pred             EEEEecccCceEEEEEEEcCCCcEEEEEEEecccc---c--cHHHHHHHHHHHHHhhCCC--CchhheeeeEecCCEEEE
Confidence            35778999888999988753 3 788888642211   0  1123567778888887743  4333222 2345677899


Q ss_pred             EEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhc
Q 048614          113 GMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      |||+++  ...|.+.+.+.  ...     -.++.++...|+.+|..
T Consensus        77 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~  120 (256)
T cd08220          77 VMEYAP--GGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK  120 (256)
T ss_pred             EEecCC--CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999997  34676766552  222     23556788888888854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=95.79  E-value=0.12  Score=41.41  Aligned_cols=107  Identities=17%  Similarity=0.037  Sum_probs=70.0

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~  109 (165)
                      .++.+|.|....||++... +|     .+++|....      ...+....+...|+..|+.+.  .|..++-.-.+..+.
T Consensus        11 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~------~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~   82 (279)
T cd05057          11 KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLRE------ETSPKANKEILDEAYVMASVD--HPHVVRLLGICLSSQ   82 (279)
T ss_pred             EcceecCCCCccEEEEEEecCCCCcceEEEEEeccC------CCCHHHHHHHHHHHHHHHhCC--CCCcceEEEEEecCc
Confidence            4578899999999999764 22     356665431      111223345666777777663  255555554555588


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC--C----CHHHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGI--K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~--~----~~~~a~~iG~~La~~h~~t  152 (165)
                      ..++|||++  ...+.+.+....  .    .-.++.+|...|+.+|...
T Consensus        83 ~~~v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  129 (279)
T cd05057          83 VQLITQLMP--LGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR  129 (279)
T ss_pred             eEEEEecCC--CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999997  346777766532  1    1357788999999999754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=95.79  E-value=0.13  Score=42.55  Aligned_cols=106  Identities=14%  Similarity=0.062  Sum_probs=61.4

Q ss_pred             ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHH-HHHhhccCCCCCceEE-EEcCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALA-LKEHGQLCPDHVPEVY-HFDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~-L~~~~~~~p~~vP~v~-~~D~~~~~~vM  114 (165)
                      .+|.|....||++.+. +| .++||.-......    ..-...+...|... ++...  .|..+.-.. +.+.+...+||
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~e~~~~l~~~~--h~~iv~~~~~~~~~~~~~lv~   75 (321)
T cd05603           2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTIL----KKKEQNHIMAERNVLLKNLK--HPFLVGLHYSFQTAEKLYFVL   75 (321)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHH----HhhHHHHHHHHHHHHHHhCC--CCCccceeeEEEcCCEEEEEE
Confidence            5788888999999886 34 6888875422110    01112233333332 32221  243333222 34667788999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++ + ..|...+......     ..++.+|...|+-+|...
T Consensus        76 e~~~-~-~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  116 (321)
T cd05603          76 DYVN-G-GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLN  116 (321)
T ss_pred             cCCC-C-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998 3 3555555544332     246778899999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=95.79  E-value=0.26  Score=39.59  Aligned_cols=107  Identities=16%  Similarity=0.005  Sum_probs=66.9

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      ++.+|.|....||++.+.. + .++||.-..-     .......++...|.++|+.+..  |..++-. ++.+.+...+|
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~-----~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv   78 (287)
T cd07848           6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDS-----EENEEVKETTLRELKMLRTLKQ--ENIVELKEAFRRRGKLYLV   78 (287)
T ss_pred             EEEecccCCEEEEEEEECCCCcEEEEEEEecc-----cccccchhhHHHHHHHHHhCCC--ccccchhhhEecCCEEEEE
Confidence            5678989999999999863 4 6888854311     1223345677788888887753  3333222 23455677899


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++.  ..+......+...     -.++.+|...|..+|...
T Consensus        79 ~e~~~~--~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  120 (287)
T cd07848          79 FEYVEK--NMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND  120 (287)
T ss_pred             EecCCC--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999983  2343322222221     247788888888888553

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=95.78  E-value=0.016  Score=51.28  Aligned_cols=80  Identities=24%  Similarity=0.252  Sum_probs=56.2

Q ss_pred             eeEecCCCceeEEEEEEeCCC------eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR--  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--  107 (165)
                      -+..+|-|.+--||.+.+.+-      +|+-|.++..-..        ..|...|.++|+...-   .+.|.+|+.-+  
T Consensus        81 llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkK--------l~Ra~tE~eIL~~lDH---PFlPTLYa~fet~  149 (459)
T KOG0610|consen   81 LLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKK--------LKRAQTEREILSLLDH---PFLPTLYASFETD  149 (459)
T ss_pred             HHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhH--------HHHHHHHHHHHHhcCC---Cccchhhheeecc
Confidence            467789999999999998742      5666666654332        3699999999976643   35688886543  


Q ss_pred             CCceEEEecCCC-CchHHHH
Q 048614          108 TMSLIGMRYLEP-PHIILRK  126 (165)
Q Consensus       108 ~~~~~vMEdL~~-~~~~lr~  126 (165)
                      +-..++||||+. +.-.||+
T Consensus       150 ~~~cl~meyCpGGdL~~Lrq  169 (459)
T KOG0610|consen  150 KYSCLVMEYCPGGDLHSLRQ  169 (459)
T ss_pred             ceeEEEEecCCCccHHHHHh
Confidence            456789999995 3334444

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=95.78  E-value=0.071  Score=42.72  Aligned_cols=107  Identities=16%  Similarity=0.014  Sum_probs=66.9

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      .++.+|.|....||++.+. ++ .+++|......      ..-..++...|.+.|+....  |..++-. .+.+.....+
T Consensus         8 ~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~l   79 (277)
T cd06642           8 KLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE------AEDEIEDIQQEITVLSQCDS--PYITRYYGSYLKGTKLWI   79 (277)
T ss_pred             HHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc------chHHHHHHHHHHHHHHcCCC--CccHhhhcccccCCceEE
Confidence            3456788888899999765 34 78888654221      11123456667777765532  3322221 2346677889


Q ss_pred             EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  ...+.+.+..+...    ..++.+|...|+-+|...
T Consensus        80 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  121 (277)
T cd06642          80 IMEYLG--GGSALDLLKPGPLEETYIATILREILKGLDYLHSER  121 (277)
T ss_pred             EEEccC--CCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            999998  34676766555432    246778888888888543

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=95.77  E-value=0.11  Score=40.91  Aligned_cols=107  Identities=13%  Similarity=0.093  Sum_probs=69.4

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~~  112 (165)
                      .+.+|.|....||++... +| .+++|.-..+-...    .-...+...|.++|+.+..  |. ++++  ++.+.....+
T Consensus         7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~~~~~~~~ei~~l~~~~~--~~-i~~~~~~~~~~~~~~l   79 (267)
T cd08224           7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMD----AKARQDCLKEIDLLKQLDH--PN-VIKYLASFIENNELNI   79 (267)
T ss_pred             eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccc----hhhHHHHHHHHHHHHhCCC--CC-eeeeeeeeecCCeEEE
Confidence            466889999999999987 45 78888765433211    1234677888888887643  22 2222  3456677889


Q ss_pred             EEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++  ...|...+..    +...     -.++.+|...|+.+|...
T Consensus        80 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  126 (267)
T cd08224          80 VLELAD--AGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR  126 (267)
T ss_pred             EEecCC--CCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998  3466665543    1112     245778888888888743

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=95.77  E-value=0.026  Score=45.18  Aligned_cols=76  Identities=24%  Similarity=0.277  Sum_probs=57.7

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMR  115 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vME  115 (165)
                      .+.+++-|.-.+||.+.-.++.+++|..++=         .+..=...|+++|+.++.  -..+|++|+||.+...  ||
T Consensus        26 v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~d---------s~r~~l~kEakiLeil~g--~~~~p~vy~yg~~~i~--me   92 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWRGGEVALKVRRRD---------SPRRNLEKEAKILEILAG--EGVTPEVYFYGEDFIR--ME   92 (201)
T ss_pred             hhhhhhcccccEEEEeeccCceEEEEEecCC---------cchhhHHHHHHHHHHhhh--cCCCceEEEechhhhh--hh
Confidence            5678889999999999988777888876632         233345689999987765  3678999999988766  99


Q ss_pred             cCCCCchHHHH
Q 048614          116 YLEPPHIILRK  126 (165)
Q Consensus       116 dL~~~~~~lr~  126 (165)
                      |+.  +..|.+
T Consensus        93 ~i~--G~~L~~  101 (201)
T COG2112          93 YID--GRPLGK  101 (201)
T ss_pred             hhc--Ccchhh
Confidence            997  445544

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=95.75  E-value=0.16  Score=40.47  Aligned_cols=110  Identities=20%  Similarity=0.092  Sum_probs=69.0

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC--CC
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR--TM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~--~~  109 (165)
                      ..+.+|.|....||++.+. .| .+++|........  ....-...+...|..+|+.+..  |..++ ++.  .+.  ..
T Consensus         6 ~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~e~~~l~~l~h--~~i~~-~~~~~~~~~~~~   80 (266)
T cd06651           6 RGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPES--PETSKEVSALECEIQLLKNLQH--ERIVQ-YYGCLRDRAEKT   80 (266)
T ss_pred             ccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCC--chhHHHHHHHHHHHHHHHHcCC--CCeee-EEEEEEcCCCCE
Confidence            3467899999999999875 34 7888876533211  1111123456667778877643  44443 332  232  34


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ..++||+++  ...|.+.+.++...     -.++.++...|+.+|...
T Consensus        81 ~~l~~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~  126 (266)
T cd06651          81 LTIFMEYMP--GGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNM  126 (266)
T ss_pred             EEEEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            568999997  34677777654432     146788888898888655

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=95.73  E-value=0.11  Score=40.97  Aligned_cols=109  Identities=11%  Similarity=0.027  Sum_probs=68.8

Q ss_pred             EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCC-CChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWP-MTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~-l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      +.+|.|-...||++.+. ++ .+++|........  .... -...+...|...|+.+..  |..++-. ++.+.+...++
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~--~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~~v   81 (268)
T cd06630           6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNT--SSEQEEVVEALRKEIRLMARLNH--PHIIRMLGATCEDSHFNLF   81 (268)
T ss_pred             ceecCcCceEEEEEEEcCCCcEEEEEEeecccCC--chhHHHHHHHHHHHHHHHHHcCC--CceehhhceeccCCeEEEE
Confidence            45788888999999874 34 8999986533211  1111 123566778888877643  3322221 23366777899


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+..  ...|.+.+.+....     -.++.+|...|+.+|...
T Consensus        82 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~  123 (268)
T cd06630          82 VEWMA--GGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQ  123 (268)
T ss_pred             EeccC--CCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99997  45777776553332     245688888888888653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=95.72  E-value=0.26  Score=41.26  Aligned_cols=107  Identities=19%  Similarity=0.137  Sum_probs=68.0

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR------  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------  107 (165)
                      .+..+|.|....||++.+. +| .++||....-.     .......+...|.++|+.+..  |..++-.-.+..      
T Consensus        19 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~~   91 (343)
T cd07880          19 DLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-----QSELFAKRAYRELRLLKHMKH--ENVIGLLDVFTPDLSLDR   91 (343)
T ss_pred             EEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-----cchHHHHHHHHHHHHHHhcCC--CCccceeeeecCCccccc
Confidence            6789999999999999865 45 89999764211     112334567788888887753  333322211222      


Q ss_pred             -CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          108 -TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 -~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                       ..+.+|||+++.   .+...+..+....    .++.+|...|+.+|...
T Consensus        92 ~~~~~lv~e~~~~---~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~g  138 (343)
T cd07880          92 FHDFYLVMPFMGT---DLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAG  138 (343)
T ss_pred             cceEEEEEecCCC---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             235899999973   4555554444322    46778888888888754

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=95.72  E-value=0.1  Score=41.91  Aligned_cols=104  Identities=16%  Similarity=0.063  Sum_probs=67.7

Q ss_pred             EecCCCceeEEEEEEeC-----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC
Q 048614           38 KEVGDGNLNFVYIVVGS-----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTM  109 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~-----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~  109 (165)
                      +.+|.|....||++...     .+ .+.+|.......      .-...+...|.+.|+.+..  |. +++++.  .+...
T Consensus        11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~E~~~l~~l~h--~n-iv~~~~~~~~~~~   81 (283)
T cd05090          11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN------PQQWGEFQQEASLMAELHH--PN-IVCLLGVVTQEQP   81 (283)
T ss_pred             eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC------HHHHHHHHHHHHHHhhCCC--CC-eeeEEEEEecCCc
Confidence            78899999999998741     23 788888763211      1112455667778877643  33 344443  46677


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCC----------------------CHHHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGIK----------------------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~~----------------------~~~~a~~iG~~La~~h~~t  152 (165)
                      ..++|||++  ..+|++.+.....                      .-.++.++...|+.+|...
T Consensus        82 ~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  144 (283)
T cd05090          82 VCMLFEYLN--QGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF  144 (283)
T ss_pred             eEEEEEcCC--CCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC
Confidence            789999997  3477776642210                      1247788999999999765

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=95.71  E-value=0.21  Score=39.19  Aligned_cols=103  Identities=18%  Similarity=0.161  Sum_probs=68.7

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~  112 (165)
                      ++.+|.|....||++.+.+ | .++||......      .+....+...|.+.++.+.  .| .+++++  +.+.....+
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~------~~~~~~~~~~e~~~l~~l~--~~-~i~~~~~~~~~~~~~~l   76 (264)
T cd06623           6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDG------DEEFRKQLLRELKTLRSCE--SP-YVVKCYGAFYKEGEISI   76 (264)
T ss_pred             eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCc------chHHHHHHHHHHHHHHhcC--CC-CeeeEEEEEccCCeEEE
Confidence            4567777777889998874 5 78988764321      1123456667777777665  34 344444  345567889


Q ss_pred             EEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHh
Q 048614          113 GMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~  150 (165)
                      +|||++  ...|++.+..... .    -.++.++...|+.+|.
T Consensus        77 v~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~  117 (264)
T cd06623          77 VLEYMD--GGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHT  117 (264)
T ss_pred             EEEecC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            999998  4578887765332 2    2577888899999997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=95.71  E-value=0.33  Score=38.10  Aligned_cols=104  Identities=20%  Similarity=0.136  Sum_probs=67.8

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      -.+.+|.|....||++.+.++ .+++|.-..-        ..+......|.+.|+.+..  |..++-. ++.+.....++
T Consensus         8 ~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~--------~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v   77 (256)
T cd05112           8 LVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG--------AMSEEDFIEEAQVMMKLSH--PKLVQLYGVCTERSPICLV   77 (256)
T ss_pred             EEeeecCcccceEEEEEEeCCCeEEEEECCCC--------CCCHHHHHHHHHHHHhCCC--CCeeeEEEEEccCCceEEE
Confidence            357788898899999987655 7888854311        2344567778888887753  4444332 23355677899


Q ss_pred             EecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 048614          114 MRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~  151 (165)
                      ||++.  ...|.+.+...  ...    -.++.++...|+.+|..
T Consensus        78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~  119 (256)
T cd05112          78 FEFME--HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS  119 (256)
T ss_pred             EEcCC--CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99998  33676666542  222    24566777888888844

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=95.70  E-value=0.15  Score=42.22  Aligned_cols=103  Identities=14%  Similarity=0.089  Sum_probs=66.0

Q ss_pred             ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~vM  114 (165)
                      .+|.|....||++.+. +| .+.+|......-..    .-...+...|.+.|+....  | ++++++  +.+.+...+||
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~----~~~~~~~~~e~~~l~~~~h--p-~i~~~~~~~~~~~~~~lv~   74 (325)
T cd05594           2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA----KDEVAHTLTENRVLQNSRH--P-FLTALKYSFQTHDRLCFVM   74 (325)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhCCC--C-CCCceEEEEEcCCEEEEEE
Confidence            5788889999999875 44 78888765332110    1123455667777765432  3 344443  34556678999


Q ss_pred             ecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHh
Q 048614          115 RYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLF  150 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~  150 (165)
                      ||++  ...|...+..+...+     .++.+|...|+-+|.
T Consensus        75 E~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~  113 (325)
T cd05594          75 EYAN--GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS  113 (325)
T ss_pred             eCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9998  346666666554332     467788889999995

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=95.70  E-value=0.3  Score=38.92  Aligned_cols=105  Identities=15%  Similarity=0.094  Sum_probs=68.1

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~  112 (165)
                      ...+|.|..+.||++.+. +| .++||.-......     .-...+...|..+++.+.  .|..+ +++  +.+.....+
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-----~~~~~~~~~e~~~l~~~~--~~~i~-~~~~~~~~~~~~~~   76 (286)
T cd07832           5 LGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-----GGIPNQALREIKALQACQ--HPYVV-KLLDVFPHGSGFVL   76 (286)
T ss_pred             EeecccCCCcEEEEEEECCCCceEEEEEEEccccc-----chhhHHHHHHHHHHHhCC--CCCCc-ceeeEEecCCeeEE
Confidence            467899999999999875 45 8999975432110     122356777888888775  34433 333  346677789


Q ss_pred             EEecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++.   .|.+.+.. ....     -.++.+|...|+.+|...
T Consensus        77 v~e~~~~---~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  119 (286)
T cd07832          77 VMEYMPS---DLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG  119 (286)
T ss_pred             EecccCC---CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999952   45444432 2211     246778888899898764

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=95.69  E-value=0.37  Score=39.42  Aligned_cols=105  Identities=11%  Similarity=0.036  Sum_probs=68.2

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      .++.+|.|....||++.+. .+ .++||.-.....      .-...+...|.+.|+.+..  |.. .+++  +.+.+...
T Consensus        10 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~i-v~~~~~~~~~~~~~   80 (309)
T cd07872          10 KLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE------EGAPCTAIREVSLLKDLKH--ANI-VTLHDIVHTDKSLT   80 (309)
T ss_pred             EEEEecccCCEEEEEEEecCCCCeEEEEEeecccc------CCcchhHHHHHHHHHhCCC--CCc-ceEEEEEeeCCeEE
Confidence            5678999999999999876 33 688897542211      1122356678888877643  332 2333  23567788


Q ss_pred             EEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++ .  .+.+.+.+. ...     ..++.+|...|+.+|...
T Consensus        81 lv~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~  124 (309)
T cd07872          81 LVFEYLD-K--DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK  124 (309)
T ss_pred             EEEeCCC-C--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998 2  455555442 221     246778899999999754

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=95.68  E-value=0.23  Score=39.79  Aligned_cols=107  Identities=16%  Similarity=0.034  Sum_probs=65.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      .+..+|.|....||++.+. ++ .++||....      .+..-...+...|...++....  |..++-. ++.+.....+
T Consensus         8 ~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~------~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~l   79 (277)
T cd06641           8 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL------EEAEDEIEDIQQEITVLSQCDS--PYVTKYYGSYLKDTKLWI   79 (277)
T ss_pred             hheeEeecCCeEEEEEEECCCCcEEEEEEecc------ccchHHHHHHHHHHHHHHhcCC--CCEeEEEEEEEeCCeEEE
Confidence            4567899999999999765 44 788896531      1111122445556666665532  4333332 2335567889


Q ss_pred             EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  ...+.+.+..+....    .++.++...|..+|...
T Consensus        80 v~e~~~--~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (277)
T cd06641          80 IMEYLG--GGSALDLLEPGPLDETQIATILREILKGLDYLHSEK  121 (277)
T ss_pred             EEEeCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCC
Confidence            999998  346666666655433    35566667777777543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=95.67  E-value=0.14  Score=43.34  Aligned_cols=106  Identities=10%  Similarity=0.074  Sum_probs=68.5

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCC-----
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DRT-----  108 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~~-----  108 (165)
                      .+.+|.|....||++.+. +| .++||.-.....     -.....|...|.++|+.+..  |..+.-.-.+ +++     
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~   77 (372)
T cd07853           5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ-----NLVSCKRVFRELKMLCFFKH--DNVLSALDILQPPHIDPFE   77 (372)
T ss_pred             cceeeeCCCEEEEEEEECCCCCEEEEEecccccc-----chHHHHHHHHHHHHHHhCCC--CCcCCHhheecCCCccccc
Confidence            467899999999999875 45 899997542211     12344678889998887753  3332222122 222     


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++.   .|.+.+..+...     -.++.+|...|..+|...
T Consensus        78 ~~~lv~e~~~~---~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~  123 (372)
T cd07853          78 EIYVVTELMQS---DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG  123 (372)
T ss_pred             eEEEEeecccc---CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            45789999972   466666555432     246778889999999764

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=95.66  E-value=0.36  Score=39.24  Aligned_cols=105  Identities=13%  Similarity=0.068  Sum_probs=69.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      .++.+|.|....||++.+. ++ .+++|+......      .-...+...|...|+.+..  |. +.+++.  .++....
T Consensus        10 ~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~n-I~~~~~~~~~~~~~~   80 (301)
T cd07873          10 KLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE------EGAPCTAIREVSLLKDLKH--AN-IVTLHDIIHTEKSLT   80 (301)
T ss_pred             EeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc------cCchhHHHHHHHHHHhcCC--CC-cceEEEEEecCCeEE
Confidence            5678999999999999876 34 788997642221      1123456678888877643  33 333333  3556678


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++ .  .+++.+.+.. ..     -.++.+|...|+.+|...
T Consensus        81 lv~e~~~-~--~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~  124 (301)
T cd07873          81 LVFEYLD-K--DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK  124 (301)
T ss_pred             EEEeccc-c--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997 2  5666665432 21     246778888999888754

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=95.65  E-value=0.2  Score=40.21  Aligned_cols=106  Identities=13%  Similarity=0.101  Sum_probs=68.6

Q ss_pred             eeEecCCCceeEEEEEEeCC------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 048614           36 TIKEVGDGNLNFVYIVVGSS------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D  106 (165)
                      -++.+|.|....||++....      + .+++|........      ........|..+|+.+..  | ++.+++  .++
T Consensus        10 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~------~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~   80 (277)
T cd05036          10 LLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSE------QDESDFLMEALIMSKFNH--Q-NIVRLIGVSFE   80 (277)
T ss_pred             eeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCH------HHHHHHHHHHHHHHhCCC--C-CEeeEEEEEcc
Confidence            45789999999999998753      2 6888866532211      112345567777766643  4 334444  556


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCC-------C-----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIK-------Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~-------~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+...++||++.  ..+|++.+.....       .     -.++.+|...|+.+|...
T Consensus        81 ~~~~~lv~e~~~--g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  136 (277)
T cd05036          81 RLPRFILLELMA--GGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH  136 (277)
T ss_pred             CCCcEEEEecCC--CCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            677899999997  3577776654321       1     146778888888888653

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=95.64  E-value=0.25  Score=40.36  Aligned_cols=107  Identities=20%  Similarity=0.141  Sum_probs=70.2

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~  112 (165)
                      .+.+|.|....||++...+ + .+++|.-..-.-  ..  .-...+...|.+.|+.+.  .| .+++++.+  +.....+
T Consensus         6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~--~~~~~~~~~e~~~l~~l~--~~-~i~~~~~~~~~~~~~~l   78 (316)
T cd05574           6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEM--IK--RNKVKRVLTEQEILATLD--HP-FLPTLYASFQTETYLCL   78 (316)
T ss_pred             eeeecCCccEEEEEEEEcCCCcEEEEEEEecccc--ch--HHHHHHHHHHHHHHHhCC--CC-CchhheeeeecCCEEEE
Confidence            4678999999999998864 4 899998653210  00  113456777888887776  24 34444433  4556789


Q ss_pred             EEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||++.  ...|.+.+...  ..+     -.++.+|...|+-+|...
T Consensus        79 v~e~~~--~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  123 (316)
T cd05574          79 VMDYCP--GGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG  123 (316)
T ss_pred             EEEecC--CCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  34676666542  222     235678889999998764

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=95.63  E-value=0.22  Score=39.28  Aligned_cols=104  Identities=20%  Similarity=0.007  Sum_probs=67.9

Q ss_pred             ecCCCceeEEEEEEeC--C---CeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEE
Q 048614           39 EVGDGNLNFVYIVVGS--S---GSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIG  113 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~--~---gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~v  113 (165)
                      .+|.|....||++...  +   ..+++|.-.....      .-..++...|...|+.+..  |..++-.-.+..+...++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~v   73 (257)
T cd05060           2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHI------AAGKKEFLREASVMAQLDH--PCIVRLIGVCKGEPLMLV   73 (257)
T ss_pred             ccCccCceeEEEeEeeccCCCcceEEEEecccccc------hHHHHHHHHHHHHHHhcCC--CCeeeEEEEEcCCceEEE
Confidence            5788888999987543  2   2688887553221      1123456677777776643  444443334455667899


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|.+.+..+...     -.++.++...|+.+|...
T Consensus        74 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~  115 (257)
T cd05060          74 MELAP--LGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKH  115 (257)
T ss_pred             EEeCC--CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            99997  34788888665422     357788888899888765

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=95.61  E-value=0.23  Score=42.27  Aligned_cols=112  Identities=14%  Similarity=0.051  Sum_probs=69.6

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DRT  108 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~~  108 (165)
                      +++ .++.+|.|....||++... +| .+++|+-...-...    .........|.++|+....  |..++-...+ +..
T Consensus        43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~il~~~~h--~~iv~~~~~~~~~~  116 (370)
T cd05596          43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK----RSDSAFFWEERDIMAHANS--EWIVQLHYAFQDDK  116 (370)
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhhHHHHHHHHHHHHhCCC--CCcceEEEEEecCC
Confidence            344 5667999999999999876 34 78889864221100    1122344567777776542  4444444333 445


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++  ...|.+.+..+....    .++.+|...|+-+|...
T Consensus       117 ~~~lv~Ey~~--gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~  162 (370)
T cd05596         117 YLYMVMEYMP--GGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMG  162 (370)
T ss_pred             EEEEEEcCCC--CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5679999997  346766665544322    35667888888888653

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=95.60  E-value=0.28  Score=39.02  Aligned_cols=106  Identities=20%  Similarity=0.142  Sum_probs=69.1

Q ss_pred             eEecCCCceeEEEEEEeCC----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCce
Q 048614           37 IKEVGDGNLNFVYIVVGSS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSL  111 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~  111 (165)
                      .+.+|.|....||++...+    . .++||.......      .-..++...|...|+.+..  |..++-.-.+..+...
T Consensus        11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~------~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~   82 (270)
T cd05056          11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS------PSVREKFLQEAYIMRQFDH--PHIVKLIGVITENPVW   82 (270)
T ss_pred             eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC------HHHHHHHHHHHHHHHhCCC--CchhceeEEEcCCCcE
Confidence            3578888888999987532    2 688887653331      1123456667777776643  5544443334456677


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++  +..|++.+.... ..     -.++.++...|+-+|...
T Consensus        83 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  127 (270)
T cd05056          83 IVMELAP--LGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR  127 (270)
T ss_pred             EEEEcCC--CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  458888886533 11     246788899999999764

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=95.60  E-value=0.22  Score=39.88  Aligned_cols=105  Identities=19%  Similarity=0.071  Sum_probs=67.6

Q ss_pred             eeEecCCCceeEEEEEEe-----CCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE----
Q 048614           36 TIKEVGDGNLNFVYIVVG-----SSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF----  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~-----~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~----  105 (165)
                      -++.+|.|+...||++..     ..+ .++||.-.....       -...+...|.++|+.+..  |. +++++.+    
T Consensus         8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~~-iv~~~~~~~~~   77 (284)
T cd05081           8 FIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA-------EHLRDFEREIEILKSLQH--DN-IVKYKGVCYSA   77 (284)
T ss_pred             eeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH-------HHHHHHHHHHHHHHhCCC--CC-eeEEEEEEccC
Confidence            467899999999999863     234 788887442211       112456678877776642  43 3444332    


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +.....+||||++  ..+|++.+.+..  ..    -.++.++...|+.+|...
T Consensus        78 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~  128 (284)
T cd05081          78 GRRNLRLVMEYLP--YGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR  128 (284)
T ss_pred             CCCceEEEEEecC--CCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            2345679999997  457777775432  22    246778888999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=95.59  E-value=0.17  Score=41.57  Aligned_cols=107  Identities=14%  Similarity=0.019  Sum_probs=70.1

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~  109 (165)
                      .+..+|.|....||++... +|     .+.||...+.      ...-...+...|..+|+.+..  |..++-.-.+..+.
T Consensus        11 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~~~e~~~l~~l~h--~niv~~~g~~~~~~   82 (316)
T cd05108          11 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA------TSPKANKEILDEAYVMASVDN--PHVCRLLGICLTST   82 (316)
T ss_pred             eeeeeecCCCceEEEEEEecCCCccceeEEEEecccc------CCHHHHHHHHHHHHHHHhCCC--CCCCeEEEEEcCCC
Confidence            6788999999999999753 33     2667765421      112234567778877776632  44444333445567


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..++||+++  ...|.+.+.+...  .    -.++.+|...|+-+|...
T Consensus        83 ~~~v~e~~~--~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~  129 (316)
T cd05108          83 VQLITQLMP--FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR  129 (316)
T ss_pred             ceeeeecCC--CCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            789999997  3467777766432  1    257789999999999754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=95.59  E-value=0.19  Score=42.44  Aligned_cols=111  Identities=14%  Similarity=0.084  Sum_probs=71.1

Q ss_pred             cc-eeEecCCCceeEEEEEEeC--CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRT  108 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~  108 (165)
                      ++ -++.+|.|....||++...  ++ .++||.-.... ..   -.-..++...|.++|+.+..  |..++-. ++.+..
T Consensus        31 ~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~-~~---~~~~~~~~~~E~~~l~~l~h--p~Iv~~~~~~~~~~  104 (340)
T PTZ00426         31 DFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSK-II---KQKQVDHVFSERKILNYINH--PFCVNLYGSFKDES  104 (340)
T ss_pred             hcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHH-hh---hhhhHHHHHHHHHHHHhCCC--CCCcceEEEEEeCC
Confidence            44 5788999999999999754  22 68888643211 00   01234566778888877642  4433322 233555


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++  ...|.+.+..+...+     .++.+|...|.-+|...
T Consensus       105 ~~~lv~Ey~~--~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  151 (340)
T PTZ00426        105 YLYLVLEFVI--GGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLN  151 (340)
T ss_pred             EEEEEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6789999997  347777776655432     35678888888888754

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=95.59  E-value=0.15  Score=41.17  Aligned_cols=109  Identities=17%  Similarity=0.030  Sum_probs=70.0

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~~~~~~v  113 (165)
                      ++.+|.|....||++.+. +| .++||.-......  .+...-..+...|.+.|+.+.  .|..++-.. +.+.....+|
T Consensus         5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERK--EAKDGINFTALREIKLLQELK--HPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             eeeeeeccccEEEEEEECCCCcEEEEEEEeccccc--cccchhhHHHHHHHHHHhhcC--CCCChhhhheeecCCEEEEE
Confidence            356899999999999875 45 8999987643321  111222344556777777665  354444332 3344567899


Q ss_pred             EecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++   ..|++.+.... ..     -.++.+|...|+.+|...
T Consensus        81 ~e~~~---~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  122 (298)
T cd07841          81 FEFME---TDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW  122 (298)
T ss_pred             EcccC---CCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99994   26777665544 22     257788899999998765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=95.58  E-value=0.11  Score=40.60  Aligned_cols=106  Identities=17%  Similarity=0.071  Sum_probs=68.2

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~~  112 (165)
                      .+.++.|....||++... ++ .+++|.-....     .+.....+...|.+.|+.+.  .|. ++++  ++.+.....+
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~~~e~~~l~~l~--~~~-i~~~~~~~~~~~~~~~   76 (256)
T cd08530           5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGS-----MSQKEREDAVNEIRILASVN--HPN-IISYKEAFLDGNKLCI   76 (256)
T ss_pred             eeeecCCCceeEEEEEECCCCCEEEEEEEehhh-----ccHHHHHHHHHHHHHHHhCC--CCC-chhhhhhhccCCEEEE
Confidence            567888888899999765 44 78888654221     12233456667777777665  233 3333  4456688899


Q ss_pred             EEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ...|++.+.+    +...     -.++.++...|+.+|...
T Consensus        77 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~  123 (256)
T cd08530          77 VMEYAP--FGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK  123 (256)
T ss_pred             EehhcC--CCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            999997  3456665544    2222     256678888888888664

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=95.58  E-value=0.11  Score=40.74  Aligned_cols=106  Identities=18%  Similarity=0.087  Sum_probs=71.2

Q ss_pred             eEecCCCceeEEEEEEeCCC--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~  112 (165)
                      ++.||.|---.||++.+.+.  .+++|.-...-...     ........|...++.+. . |.. ++++  ..+.....+
T Consensus         4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~-----~~~~~~~~e~~~~~~l~-~-~~i-~~~~~~~~~~~~~~~   75 (260)
T PF00069_consen    4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE-----EEREENIREIKILRRLR-H-PNI-VQILDVFQDDNYLYI   75 (260)
T ss_dssp             EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH-----HHHHHHHHHHHHHHHHT-B-TTB-CHEEEEEEESSEEEE
T ss_pred             eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc-----cccchhhhhhhcccccc-c-ccc-ccccccccccccccc
Confidence            56788888889999998844  79999887554321     11112234888888773 2 333 3333  335677889


Q ss_pred             EEecCCCCchHHHHHHH-cCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLI-AGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~-~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||++.  ...|.+.+. .+...    -.++.+|...|+.+|...
T Consensus        76 v~~~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~  118 (260)
T PF00069_consen   76 VMEYCP--GGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKG  118 (260)
T ss_dssp             EEEEET--TEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccc--ccccccccccccccccccccccccccccccccccccc
Confidence            999998  347777776 34332    367888899999999863

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=95.58  E-value=0.16  Score=40.96  Aligned_cols=105  Identities=17%  Similarity=0.086  Sum_probs=66.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      .++.+|.|..+.||++... +| .+++|.......      +-...+...|.++|+.+..  |..++-. ++.+.....+
T Consensus         9 ~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~l   80 (284)
T cd06620           9 TISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK------SSVRKQILRELQIMHECRS--PYIVSFYGAFLNENNICM   80 (284)
T ss_pred             HHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc------chHHHHHHHHHHHHHHcCC--CCcceEeeeEecCCEEEE
Confidence            3567889999999999876 34 677776442111      1224567778888876642  4433332 4456677899


Q ss_pred             EEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHh
Q 048614          113 GMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~  150 (165)
                      ||||++  ...|...+..... .    -.++.++...|..+|.
T Consensus        81 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~  121 (284)
T cd06620          81 CMEFMD--CGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYN  121 (284)
T ss_pred             EEecCC--CCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999998  3466666655332 2    2456677777777874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=95.58  E-value=0.21  Score=42.69  Aligned_cols=113  Identities=14%  Similarity=0.053  Sum_probs=69.6

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cC
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DR  107 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~  107 (165)
                      .+++ .++.+|.|....||++.... + .+++|.....-...    .-...+...|..+|+....  |..++-...+ +.
T Consensus        42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~----~~~~~~~~~e~~i~~~~~h--p~iv~~~~~~~~~  115 (371)
T cd05622          42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK----RSDSAFFWEERDIMAFANS--PWVVQLFYAFQDD  115 (371)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhh----hHHHHHHHHHHHHHHhCCC--CCCCeEEEEEEcC
Confidence            3455 67789999999999998863 3 68888754221110    0112344566666665432  4444433333 45


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ....+||||++  +..|...+..+....    .++.+|...|..+|...
T Consensus       116 ~~~~lv~Ey~~--gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  162 (371)
T cd05622         116 RYLYMVMEYMP--GGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG  162 (371)
T ss_pred             CEEEEEEcCCC--CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            56779999997  346766665544322    35678888898898653

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=95.58  E-value=0.23  Score=38.76  Aligned_cols=108  Identities=15%  Similarity=0.046  Sum_probs=66.1

Q ss_pred             EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEE
Q 048614           38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~v  113 (165)
                      +.+|.|...-||++.+. ++ .+++|....--.  .....--..+...|...|+....  | .+++++.  .+.....++
T Consensus         6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~~~~e~~~l~~~~h--~-~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADD--GQTGQEAVKQLEQEIALLSKLQH--P-NIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             ceeeecCCceEEEEEEcCCCcEEEEEEEEEccc--cccchHHHHHHHHHHHHHHhcCC--C-CchheeeeEecCCeEEEE
Confidence            56788888899999876 45 899997532110  00011123456667777766542  3 3333443  355677899


Q ss_pred             EecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++  ...|.+.+.+... .    -.++.+|...|+.+|...
T Consensus        81 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  122 (258)
T cd06632          81 LELVP--GGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRN  122 (258)
T ss_pred             EEecC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99997  3467666655432 1    246778888888888654

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=95.58  E-value=0.26  Score=39.28  Aligned_cols=106  Identities=15%  Similarity=0.023  Sum_probs=68.4

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      +..+|.|..+-||++.+. ++ .+++|.-..  .   .. .-.......|.++++.+.  -|..++-. ++.+.....+|
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~--~---~~-~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~v   77 (274)
T cd06609           6 LECIGKGSFGEVYKAIDKRTNQVVAIKVIDL--E---EA-EDEIEDIQQEIQFLSQCR--SPYITKYYGSFLKGSKLWII   77 (274)
T ss_pred             hhhhcCCCCeEEEEEEECCCCeEEEEEEeec--c---cc-chHHHHHHHHHHHHHHcC--CCCeeeeeEEEEECCeEEEE
Confidence            356788888999999876 34 788887531  1   11 122345567777787775  24444333 34556677799


Q ss_pred             EecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|.+.+..+...    -.++.++...|..+|...
T Consensus        78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~  118 (274)
T cd06609          78 MEYCG--GGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEG  118 (274)
T ss_pred             EEeeC--CCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99998  45777777665332    246677777888888764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=95.57  E-value=0.36  Score=38.49  Aligned_cols=107  Identities=16%  Similarity=0.148  Sum_probs=68.4

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      +..++.|..+.||++.+. +| .+++|.-....     +...-......|..+|+.+..  |..++-+ ++.+.....++
T Consensus         6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~v   78 (286)
T cd07847           6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESE-----DDPVIKKIALREIRMLKQLKH--PNLVNLIEVFRRKRKLHLV   78 (286)
T ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEEeecc-----cCccccHHHHHHHHHHHhCCC--CCEeeeeeEEeeCCEEEEE
Confidence            467899999999999886 35 78989643211     111122455678888877643  3333322 23355567899


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++  ...|...+......     -.++.+|...|+.+|...
T Consensus        79 ~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~  120 (286)
T cd07847          79 FEYCD--HTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN  120 (286)
T ss_pred             EeccC--ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998  35676655544322     257788888999999753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=95.57  E-value=0.15  Score=42.37  Aligned_cols=84  Identities=17%  Similarity=0.061  Sum_probs=51.9

Q ss_pred             eEecCCCceeEEEEEEe------CCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCC
Q 048614           37 IKEVGDGNLNFVYIVVG------SSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRT  108 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~------~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~  108 (165)
                      .+.+|.|....||++..      ..+ .+.||+-.....      .-...+...|.++|+.+... |. +..++. +...
T Consensus        12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~n-iv~~~~~~~~~   83 (338)
T cd05102          12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT------ASEHKALMSELKILIHIGNH-LN-VVNLLGACTKP   83 (338)
T ss_pred             eeEeccCCcceEEEEEEeccCCcccchhhheeccccccc------hHHHHHHHHHHHHHHHhccC-cc-eeeEEeEecCC
Confidence            57799999999999963      123 688887542211      11234677788888776432 33 444443 3332


Q ss_pred             --CceEEEecCCCCchHHHHHHHc
Q 048614          109 --MSLIGMRYLEPPHIILRKGLIA  130 (165)
Q Consensus       109 --~~~~vMEdL~~~~~~lr~~l~~  130 (165)
                        ...++|||++  ..+|.+.+..
T Consensus        84 ~~~~~lv~ey~~--~g~L~~~l~~  105 (338)
T cd05102          84 NGPLMVIVEFCK--YGNLSNFLRA  105 (338)
T ss_pred             CCceEEEEecCC--CCcHHHHHHh
Confidence              3568899998  3466666654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=95.56  E-value=0.33  Score=39.06  Aligned_cols=105  Identities=15%  Similarity=0.089  Sum_probs=68.9

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~  111 (165)
                      .+..+|.|....||++.+. ++ .++||.-......      -.......|.++|+.+..  |. +.++  +..+.+...
T Consensus         9 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~------~~~~~~~~E~~~l~~l~h--~~-i~~~~~~~~~~~~~~   79 (291)
T cd07844           9 KLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE------GAPFTAIREASLLKDLKH--AN-IVTLHDIIHTKKTLT   79 (291)
T ss_pred             EEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc------CCchhHHHHHHHHhhCCC--cc-eeeEEEEEecCCeEE
Confidence            5678899999999999886 44 7999986543321      112345568888887743  33 2333  345667789


Q ss_pred             EEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++ .  .|.+.+....  ..    -.++.++...|.-+|...
T Consensus        80 lv~e~~~-~--~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~  123 (291)
T cd07844          80 LVFEYLD-T--DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR  123 (291)
T ss_pred             EEEecCC-C--CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998 3  5666665422  22    245667888888888654

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=95.56  E-value=0.25  Score=39.85  Aligned_cols=104  Identities=15%  Similarity=0.085  Sum_probs=63.0

Q ss_pred             cCCCceeEEEEEEeC-CC-eEEEeecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceEEEe
Q 048614           40 VGDGNLNFVYIVVGS-SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DRTMSLIGMR  115 (165)
Q Consensus        40 l~~Gn~N~v~rv~~~-~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~~~~~~vME  115 (165)
                      +|.|....||++... .| .+.+|.-... ++.     .........|.++|+.+..  |..++-...| +.....+|||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-----~~~~~~~~~E~~il~~l~h--p~i~~~~~~~~~~~~~~lv~e   73 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK-----KSGEKMALLEKEILEKVNS--PFIVNLAYAFESKTHLCLVMS   73 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc-----chhhHHHHHHHHHHHhcCC--CcEEEEEEEEecCCeEEEEEe
Confidence            467888889999875 34 7888865421 111     0111233458888877643  5544443343 4455679999


Q ss_pred             cCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614          116 YLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |++  ..+|+..+....   ..    -.++.+|...|+-+|...
T Consensus        74 ~~~--g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  115 (277)
T cd05607          74 LMN--GGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD  115 (277)
T ss_pred             cCC--CCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            997  346666554321   11    246678899999999643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=95.56  E-value=0.067  Score=45.39  Aligned_cols=107  Identities=20%  Similarity=0.198  Sum_probs=70.4

Q ss_pred             EecCCCceeEEEEEEeCCC-eEEEeecC-------------ccccc-cCCCC-CCChHHHHHHHHHHHHhhccCCCCCce
Q 048614           38 KEVGDGNLNFVYIVVGSSG-SFVIKQAL-------------PYVRC-IGESW-PMTKERAYFEALALKEHGQLCPDHVPE  101 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~g-svIvKqa~-------------p~~r~-~~~~~-~l~~~R~~~E~~~L~~~~~~~p~~vP~  101 (165)
                      .++|-|-=..||-+.+++| .++||.=+             .|++. ..-+| -++.-=+..|.++|+.+... ...||+
T Consensus        97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~-G~~VP~  175 (304)
T COG0478          97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE-GVKVPK  175 (304)
T ss_pred             cccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc-CCCCCC
Confidence            6777888888999999877 89988643             33321 11245 34444456677788777665 568999


Q ss_pred             EEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHH
Q 048614          102 VYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTL  149 (165)
Q Consensus       102 v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h  149 (165)
                      ++  |-+.|++|||++.  +..|+..=++-+..+.+...|-.+++..-
T Consensus       176 P~--~~nRHaVvMe~ie--G~eL~~~r~~~en~~~il~~il~~~~~~~  219 (304)
T COG0478         176 PI--AWNRHAVVMEYIE--GVELYRLRLDVENPDEILDKILEEVRKAY  219 (304)
T ss_pred             cc--ccccceeeeehcc--cceeecccCcccCHHHHHHHHHHHHHHHH
Confidence            99  8889999999998  34444322233344566666666665543

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=95.55  E-value=0.44  Score=38.85  Aligned_cols=106  Identities=16%  Similarity=0.052  Sum_probs=69.4

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-eEEEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP-EVYHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~D~~~~~~  112 (165)
                      -++.+|.|....||++.+. +| .++||.-.....      .-...+...|..+|+.+..  |..+. .-++.+.+...+
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~l   80 (303)
T cd07869           9 KLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE------EGTPFTAIREASLLKGLKH--ANIVLLHDIIHTKETLTL   80 (303)
T ss_pred             EeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc------cccchhHHHHHHHHhhCCC--CCcCeEEEEEecCCeEEE
Confidence            5688999999999999986 44 789997542111      1223466778888887643  33322 223456788899


Q ss_pred             EEecCCCCchHHHHHHHcC--CCCH----HHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAG--IKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g--~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++.   .+.+.+...  ...+    .++.+|...|+-+|...
T Consensus        81 v~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  123 (303)
T cd07869          81 VFEYVHT---DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY  123 (303)
T ss_pred             EEECCCc---CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999973   344555442  2222    46678888888888743

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=95.54  E-value=0.23  Score=39.47  Aligned_cols=105  Identities=15%  Similarity=0.095  Sum_probs=69.8

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~  112 (165)
                      +..++.|..+.||++.+. +| .+++|+-.....     .+-...+...|.++|+.+.  .|. +.+++  ..+.....+
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~e~~~l~~l~--~~~-i~~~~~~~~~~~~~~~   75 (283)
T cd05118           4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-----SEGIPKTALREIKLLKELN--HPN-IIKLLDVFRHKGDLYL   75 (283)
T ss_pred             ceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-----cchhHHHHHHHHHHHHHhc--CCC-cchHHHhhccCCCEEE
Confidence            467888999999999876 44 799997543322     1233457777888888775  233 22233  346677889


Q ss_pred             EEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++ .  .+.+.+...  ...    -.++.+|...|+.+|...
T Consensus        76 v~e~~~-~--~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  118 (283)
T cd05118          76 VFEFMD-T--DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG  118 (283)
T ss_pred             EEeccC-C--CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997 2  555666553  222    247788889999998754

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=95.54  E-value=0.33  Score=38.55  Aligned_cols=105  Identities=19%  Similarity=0.076  Sum_probs=68.6

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~~~~~  112 (165)
                      ....+|.|....||++...+ + .+++|....      .  .........|.++|+.+..  |..++-.-. .+.....+
T Consensus        10 ~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~------~--~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~l   79 (263)
T cd05052          10 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE------D--TMEVEEFLKEAAVMKEIKH--PNLVQLLGVCTREPPFYI   79 (263)
T ss_pred             EeeecCCcccceEEEEEEecCCceEEEEEecC------C--chHHHHHHHHHHHHHhCCC--CChhheEEEEcCCCCcEE
Confidence            44678888888999988653 4 788886431      1  1234567778888887743  554444322 34456679


Q ss_pred             EEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++  ...|.+.+....   ..    -.++.++...|+.+|...
T Consensus        80 v~e~~~--~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~  124 (263)
T cd05052          80 ITEFMT--YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN  124 (263)
T ss_pred             EEEeCC--CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997  346766665422   12    135788899999999654

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=95.54  E-value=0.27  Score=39.44  Aligned_cols=105  Identities=13%  Similarity=0.027  Sum_probs=66.0

Q ss_pred             cCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceEEEec
Q 048614           40 VGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRTMSLIGMRY  116 (165)
Q Consensus        40 l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~~~~~vMEd  116 (165)
                      +|.|...-||++.+. +| .+++|.-.... ...   .....+...|.++|+.++  .|..++-... -+.+...+||||
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~-~~~---~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~lv~e~   74 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKR-LKK---RKGEQMALNEKKILEKVS--SRFIVSLAYAFETKDDLCLVMTL   74 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhh-hhh---hhhhHHHHHHHHHHHhCC--CCCEeeeeeEEecCCeEEEEEec
Confidence            467777889999765 45 78888654221 100   012334456888888776  3554444323 355678899999


Q ss_pred             CCCCchHHHHHHHcCC--CCH-----HHHHHHHHHHHHHHhcc
Q 048614          117 LEPPHIILRKGLIAGI--KYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       117 L~~~~~~lr~~l~~g~--~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      ++  ...|++.+.+..  ..+     .++.++...|.-+|...
T Consensus        75 ~~--~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  115 (277)
T cd05577          75 MN--GGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR  115 (277)
T ss_pred             CC--CCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            97  457877775533  222     35678888888888764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=95.53  E-value=0.39  Score=38.86  Aligned_cols=105  Identities=14%  Similarity=0.191  Sum_probs=70.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      ....+|.|....||++.+. ++ .+++|...  .     .+.-..+....|...++.+..  |. +.+++  +.+.+...
T Consensus        23 ~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~--~-----~~~~~~~~~~~e~~~l~~~~h--~~-vv~~~~~~~~~~~~~   92 (285)
T cd06648          23 NFVKIGEGSTGIVCIATDKSTGRQVAVKKMD--L-----RKQQRRELLFNEVVIMRDYQH--PN-IVEMYSSYLVGDELW   92 (285)
T ss_pred             cceEeccCCCeEEEEEEECCCCCEEEEEEEe--c-----cchhHHHHHHHHHHHHHHcCC--CC-hheEEEEEEcCCeEE
Confidence            5779999999999999865 34 79999642  1     111223345556667766542  33 33343  34678889


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ++|||++  ...|++.+..+....    .++.++...|+-+|...
T Consensus        93 ~v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  135 (285)
T cd06648          93 VVMEFLE--GGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQG  135 (285)
T ss_pred             EEEeccC--CCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  347888777755332    47788889999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=95.48  E-value=0.28  Score=39.26  Aligned_cols=106  Identities=16%  Similarity=0.117  Sum_probs=68.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~  111 (165)
                      .+..+|.|....||++.+. +| .++||.......   ..  -...+...|.+.|+.+..  |.. .++  ++.+.+...
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~--~~~~~~~~E~~~l~~l~h--~~i-~~~~~~~~~~~~~~   75 (284)
T cd07860           4 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE---TE--GVPSTAIREISLLKELNH--PNI-VKLLDVIHTENKLY   75 (284)
T ss_pred             eeeeecCCCceEEEEEEECCCCCEEEEEEcccccc---cc--ccchHHHHHHHHHHhcCC--CCC-cchhhhcccCCcEE
Confidence            4677899999999999875 44 788886542221   11  122466778888887753  332 222  234778889


Q ss_pred             EEEecCCCCchHHHHHHHc---CCCC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIA---GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~---g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++|||++ .  .++..+..   +...    -.++.++...|+-+|...
T Consensus        76 ~v~e~~~-~--~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~  120 (284)
T cd07860          76 LVFEFLH-Q--DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR  120 (284)
T ss_pred             EEeeccc-c--CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997 2  45555543   2222    256778888899888764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=95.47  E-value=0.43  Score=38.50  Aligned_cols=106  Identities=14%  Similarity=0.104  Sum_probs=67.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      ....+|.|....||++.+. +| .+++|.......     ..--.++...|.+.|+.+..  |. +++++  +.+.....
T Consensus         6 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~   77 (294)
T PLN00009          6 KVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-----DEGVPSTAIREISLLKEMQH--GN-IVRLQDVVHSEKRLY   77 (294)
T ss_pred             EEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-----cccchHHHHHHHHHHHhccC--CC-EeeEEEEEecCCeEE
Confidence            4567899999999999876 45 799996432110     01122456678888877743  33 33333  44678889


Q ss_pred             EEEecCCCCchHHHHHHHcCCC--C-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIK--Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~--~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  . .+.+.+.....  .     -.++.+|...|+-+|...
T Consensus        78 lv~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  122 (294)
T PLN00009         78 LVFEYLD--L-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR  122 (294)
T ss_pred             EEEeccc--c-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  2 45555543221  1     246778888888888654

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=95.46  E-value=0.57  Score=37.70  Aligned_cols=109  Identities=16%  Similarity=0.091  Sum_probs=68.4

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--  106 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--  106 (165)
                      .+++ .+..++.|....||++.+. ++ .+++|.-.+.        ....++...|...++.+... | .+++++.+-  
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~--------~~~~~~~~~e~~~l~~l~~h-~-ni~~~~~~~~~   90 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI--------SDVDEEIEAEYNILQSLPNH-P-NVVKFYGMFYK   90 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc--------ccHHHHHHHHHHHHHHhcCC-C-CeEEEEEEEEe
Confidence            4455 5567899999999999885 34 6788865421        11235666777777665332 3 445555432  


Q ss_pred             -----CCCceEEEecCCCCchHHHHHHH----cCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          107 -----RTMSLIGMRYLEPPHIILRKGLI----AGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 -----~~~~~~vMEdL~~~~~~lr~~l~----~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                           .....+||||++  ..+|++.+.    .+...+     .++.++...|..+|...
T Consensus        91 ~~~~~~~~~~lv~ey~~--~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  148 (291)
T cd06639          91 ADKLVGGQLWLVLELCN--GGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR  148 (291)
T ss_pred             ccccCCCeeEEEEEECC--CCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                 134789999997  346665543    233222     36778888888898754

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=95.45  E-value=0.38  Score=37.36  Aligned_cols=107  Identities=18%  Similarity=0.040  Sum_probs=70.7

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      .+.+|.|....||++.+. .+ .+++|.......     ..-..++...|.+.|+.+..  |..++-. +..+.....++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v   77 (254)
T cd06627           5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-----KEEALKSIMQEIDLLKNLKH--PNIVKYIGSIETSDSLYII   77 (254)
T ss_pred             eeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-----CHHHHHHHHHHHHHHHhCCC--CCccEEEEEEEeCCEEEEE
Confidence            567889999999999876 34 788887764321     01234567778788777642  4433322 34556677899


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|.+.+......     -.++.++...|+.+|...
T Consensus        78 ~e~~~--~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~  119 (254)
T cd06627          78 LEYAE--NGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQG  119 (254)
T ss_pred             EecCC--CCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            99997  35787777653322     246778888888888654

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=95.43  E-value=0.72  Score=37.63  Aligned_cols=106  Identities=18%  Similarity=0.135  Sum_probs=68.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      .++.+|.|....||++.+. +| .++||+-..       ...-..++...|.+.++....  |..++-+ ++.+.+...+
T Consensus        23 ~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~-------~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~l   93 (296)
T cd06655          23 RYEKIGQGASGTVFTAIDVATGQEVAIKQINL-------QKQPKKELIINEILVMKELKN--PNIVNFLDSFLVGDELFV   93 (296)
T ss_pred             EEEEEecCCCeEEEEEEEcCCCcEEEEEEEec-------ccCchHHHHHHHHHHHHhcCC--CceeeeeeeEecCceEEE
Confidence            6678999999999999764 44 899997531       111234566778887776642  4433322 3446678899


Q ss_pred             EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...|...+..+....    .++.++...|+.+|...
T Consensus        94 v~e~~~--~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~  135 (296)
T cd06655          94 VMEYLA--GGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQ  135 (296)
T ss_pred             EEEecC--CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  346766665543322    35566778888888543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=95.42  E-value=0.36  Score=39.37  Aligned_cols=106  Identities=18%  Similarity=0.149  Sum_probs=69.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      .++.+|.|....||++.+. +| .+++|.....      . ....++...|..+|+....  |..++-+ ++.+.+...+
T Consensus        23 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~------~-~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~l   93 (297)
T cd06656          23 RFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQ------Q-QPKKELIINEILVMRENKN--PNIVNYLDSYLVGDELWV   93 (297)
T ss_pred             eeeeeccCCCeEEEEEEECCCCCEEEEEEEecC------c-cchHHHHHHHHHHHHhCCC--CCEeeEEEEEecCCEEEE
Confidence            6678999999999999874 44 8999964311      1 1233566777777766533  4444433 3346677889


Q ss_pred             EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  ...+.+.+.++...    ..++.++...|+.+|...
T Consensus        94 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~  135 (297)
T cd06656          94 VMEYLA--GGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQ  135 (297)
T ss_pred             eecccC--CCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  34666666554322    356667888888888653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=95.41  E-value=0.24  Score=42.27  Aligned_cols=113  Identities=12%  Similarity=-0.001  Sum_probs=70.1

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcC
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDR  107 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~  107 (165)
                      .+++ .+..+|.|....||++.... + .+.+|.....-...    .....+...|.++++....  |..++-. .+.+.
T Consensus        42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~i~~~~~h--p~iv~~~~~~~~~  115 (370)
T cd05621          42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK----RSDSAFFWEERDIMAFANS--PWVVQLFCAFQDD  115 (370)
T ss_pred             HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hhhHHHHHHHHHHHHhCCC--CCEeeEEEEEEcC
Confidence            3445 56779999999999999864 4 67888754211100    1122345567777765432  4433332 23466


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ....+||||++  ...|.+.+..+....    .++.+|...|.-+|...
T Consensus       116 ~~~~lv~Ey~~--gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~  162 (370)
T cd05621         116 KYLYMVMEYMP--GGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMG  162 (370)
T ss_pred             CEEEEEEcCCC--CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            67889999997  346766665544322    36678888888888754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=95.40  E-value=0.3  Score=39.36  Aligned_cols=107  Identities=11%  Similarity=-0.048  Sum_probs=62.6

Q ss_pred             cCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEEe
Q 048614           40 VGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGMR  115 (165)
Q Consensus        40 l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vME  115 (165)
                      +|.|...-||++.+. +| .+.+|.-.....    ...-...+...|...++......-..++..+.  .+.+...+|||
T Consensus         2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   77 (278)
T cd05606           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRI----KMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILD   77 (278)
T ss_pred             cccCCCeEEEEEEEecCCCEEEEEEeecccc----ccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEe
Confidence            677888899999875 34 788997653211    01111223445555666555432223333332  25567789999


Q ss_pred             cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |++  ...|.+.+......     -.++.++...|+.+|...
T Consensus        78 ~~~--g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~  117 (278)
T cd05606          78 LMN--GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRF  117 (278)
T ss_pred             cCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            998  34666666544332     246677778888888543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=95.40  E-value=0.32  Score=39.70  Aligned_cols=105  Identities=14%  Similarity=0.114  Sum_probs=68.8

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      ...+|.|....||++... +| .++||...  .+.     .-...+...|...|+....  |..++-. ++.+.+...++
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~--~~~-----~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~lv   95 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMD--LRK-----QQRRELLFNEVVIMRDYQH--ENVVEMYNSYLVGDELWVV   95 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEec--ccc-----hhHHHHHHHHHHHHHhcCC--cchhheeeEEEeCCEEEEE
Confidence            456899999999999775 45 79999642  111     1123455667777776653  3322222 45577889999


Q ss_pred             EecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++  ...+++.+..+...    -.++.++...|+.+|...
T Consensus        96 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~g  136 (292)
T cd06657          96 MEFLE--GGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQG  136 (292)
T ss_pred             EecCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998  34677766555432    257778888888888753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=95.39  E-value=0.22  Score=39.24  Aligned_cols=104  Identities=16%  Similarity=-0.004  Sum_probs=66.8

Q ss_pred             eEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~v  113 (165)
                      .+.+|.|....||++.+.++ .+.+|.....-       .....+...|...|+.+..  |. +.+++  ..+.+...++
T Consensus        11 ~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~~~~lv   80 (261)
T cd05148          11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD-------LLKQQDFQKEVQALKRLRH--KH-LISLFAVCSVGEPVYII   80 (261)
T ss_pred             hhhhccCCCccEEEeEecCCCcEEEEeccccc-------hhhHHHHHHHHHHHhcCCC--cc-hhheeeeEecCCCeEEE
Confidence            45678888899999998766 78888743211       1123455566666666542  33 33333  3566778899


Q ss_pred             EecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++  ..+|.+.+.+.  ...     ..++.+|...|..+|...
T Consensus        81 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~  124 (261)
T cd05148          81 TELME--KGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN  124 (261)
T ss_pred             Eeecc--cCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998  34677776642  211     346778888888888654

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=95.39  E-value=0.51  Score=37.46  Aligned_cols=106  Identities=17%  Similarity=0.107  Sum_probs=69.3

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcC--CCce
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDR--TMSL  111 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~--~~~~  111 (165)
                      ++.+|.|..+.||++...+ | .+++|.-......    + -.......|.+.|+.+.  .|..++-. +..+.  ....
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~----~-~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~~   76 (287)
T cd07840           4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEK----E-GFPITAIREIKLLQKLR--HPNIVRLKEIVTSKGKGSIY   76 (287)
T ss_pred             eEEeccCCCeEEEEEEECCCCeEEEEEEEeccccc----c-cchHHHHHHHHHHHhcc--CCCeeeheeeEecCCCCcEE
Confidence            5678999999999998774 4 7889987754311    1 11234556888887775  35444433 22233  5789


Q ss_pred             EEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||.+  . .+...+... ...     -.++.+|...|+.+|...
T Consensus        77 lv~e~~~--~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~  120 (287)
T cd07840          77 MVFEYMD--H-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG  120 (287)
T ss_pred             EEecccc--c-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  2 566666543 121     246778888899898764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=95.37  E-value=0.37  Score=38.28  Aligned_cols=109  Identities=17%  Similarity=0.075  Sum_probs=67.4

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC--Cc
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT--MS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~--~~  110 (165)
                      .+.+|.|....||++.+. +| .+++|........  ..-.-...+...|.++|+.+..  |..+ +++.+  |.+  ..
T Consensus         7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~~~~ei~~l~~l~h--~~i~-~~~~~~~~~~~~~~   81 (264)
T cd06653           7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDS--QETSKEVNALECEIQLLKNLRH--DRIV-QYYGCLRDPEEKKL   81 (264)
T ss_pred             eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCccc--chhhHHHHHHHHHHHHHHHcCC--CCcc-eEEEEEEcCCCCEE
Confidence            567888999999999875 35 7888974321111  1111233466678888887753  4433 33332  333  35


Q ss_pred             eEEEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      .++||+++  ...|.+.+..... .    -.++.+|...|..+|...
T Consensus        82 ~~v~e~~~--~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~  126 (264)
T cd06653          82 SIFVEYMP--GGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNM  126 (264)
T ss_pred             EEEEEeCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            78999997  3467666655332 2    246678888888888554

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=95.34  E-value=0.36  Score=37.89  Aligned_cols=106  Identities=20%  Similarity=0.143  Sum_probs=70.1

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~  112 (165)
                      .+.+|.|....||++.+. ++ .+++|.-...     ...+-...+...|.++++.+..   ..+.+++.+  +.+...+
T Consensus         5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~-----~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~~~~~~l   76 (264)
T cd06626           5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQ-----DNDPKTIKEIADEMKVLELLKH---PNLVKYYGVEVHREKVYI   76 (264)
T ss_pred             eeEeecCCCcEEEEEEECCCCcEEEEEEEECc-----ccchHHHHHHHHHHHHHHhCCC---CChhheeeeEecCCEEEE
Confidence            467899999999999875 34 7888874311     1112334566677777776643   344455544  4567899


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ...|++.+..+...     -.++.++...|+.+|...
T Consensus        77 v~e~~~--~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~  119 (264)
T cd06626          77 FMEYCS--GGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHG  119 (264)
T ss_pred             EEecCC--CCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  45777777665322     245677888888888755

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=95.33  E-value=0.42  Score=37.59  Aligned_cols=105  Identities=17%  Similarity=0.132  Sum_probs=68.1

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~  112 (165)
                      .+.+|.|...-||++.+. ++ .+++|.-.-..      -.-..++...|...|+.+..  |. +++++  +.+.....+
T Consensus         5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~------~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~l   75 (255)
T cd08219           5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK------SSSAVEDSRKEAVLLAKMKH--PN-IVAFKESFEADGHLYI   75 (255)
T ss_pred             EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc------chHHHHHHHHHHHHHHhCCC--CC-cceEEEEEEECCEEEE
Confidence            577899999999999876 34 78889753111      01234677778888876643  33 33333  346677889


Q ss_pred             EEecCCCCchHHHHHHHc--CCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIA--GIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~--g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      +|||++  ...+.+.+..  +...+     .++.+|...|..+|...
T Consensus        76 v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~  120 (255)
T cd08219          76 VMEYCD--GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR  120 (255)
T ss_pred             EEeeCC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            999997  3455555543  22222     45788899999888753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=95.33  E-value=0.22  Score=39.80  Aligned_cols=106  Identities=18%  Similarity=0.148  Sum_probs=66.6

Q ss_pred             eeEecCCCceeEEEEEEeCC-------CeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-------GSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-------gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      -.+.+|.|....||++....       ..+++|.-.....      .-...+...|...|+.+..  |. +.+++.+  +
T Consensus         9 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~------~~~~~~~~~ei~~l~~l~h--~~-i~~~~~~~~~   79 (283)
T cd05048           9 FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE------PKVQQEFRQEAELMSDLQH--PN-IVCLLGVCTK   79 (283)
T ss_pred             hhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC------HHHHHHHHHHHHHHHhcCC--cc-cceEEEEEcC
Confidence            35678889889999997642       1577776542211      1112345667777766542  33 3444443  5


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCC-----------------C----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIK-----------------Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~-----------------~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....++||+++  ..+|.+.+.....                 .    -.++.++...|+.+|...
T Consensus        80 ~~~~~~~~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~  144 (283)
T cd05048          80 EQPTCMLFEYLA--HGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH  144 (283)
T ss_pred             CCceEEEEecCC--CCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            566789999997  3467777655321                 1    247888999999999654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=95.32  E-value=0.43  Score=38.92  Aligned_cols=109  Identities=17%  Similarity=0.150  Sum_probs=68.4

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      +++ .+..+|.|....||++.+. .| .+++|.......  ..+...   +...|..+|+.+..  |.. .+++.+  +.
T Consensus         7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~---~~~~E~~~l~~l~h--~~i-~~~~~~~~~~   78 (309)
T cd07845           7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNE--RDGIPI---SSLREITLLLNLRH--PNI-VELKEVVVGK   78 (309)
T ss_pred             cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccC--CCCCcc---hhhHHHHHHHhCCC--CCC-cceEEEEecC
Confidence            344 5667899999999999886 35 788897542211  112222   34558888877643  333 333332  22


Q ss_pred             --CCceEEEecCCCCchHHHHHHHcCC-C-----CHHHHHHHHHHHHHHHhcc
Q 048614          108 --TMSLIGMRYLEPPHIILRKGLIAGI-K-----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 --~~~~~vMEdL~~~~~~lr~~l~~g~-~-----~~~~a~~iG~~La~~h~~t  152 (165)
                        +...+|||+++.   .+...+.... .     ...++.+|...|+.+|...
T Consensus        79 ~~~~~~lv~e~~~~---~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  128 (309)
T cd07845          79 HLDSIFLVMEYCEQ---DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF  128 (309)
T ss_pred             CCCeEEEEEecCCC---CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              457899999972   4555555422 1     1357888899999999765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=95.32  E-value=0.09  Score=41.49  Aligned_cols=104  Identities=18%  Similarity=0.085  Sum_probs=67.9

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPE-VYHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~~~~~~v  113 (165)
                      ++.+|.|...-||++.+. ++ .+++|.-....      -.....+...|.+.|+...  -|..++- -.+.+.....++
T Consensus         6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~------~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~lv   77 (265)
T cd06605           6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI------NEAIQKQILRELDILHKCN--SPYIVGFYGAFYNNGDISIC   77 (265)
T ss_pred             HHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc------ChHHHHHHHHHHHHHHHCC--CCchhhhheeeecCCEEEEE
Confidence            345778888889999887 34 78888644221      0122345667777777665  3443322 134567888999


Q ss_pred             EecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHh
Q 048614          114 MRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~  150 (165)
                      ||+++  ...|++.+... ...     ..++.++...|+.+|.
T Consensus        78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~  118 (265)
T cd06605          78 MEYMD--GGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHE  118 (265)
T ss_pred             EEecC--CCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcC
Confidence            99998  45777777654 222     2477888899999997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>PHA03212 serine/threonine kinase US3; Provisional

Probab=95.31  E-value=0.36  Score=41.72  Aligned_cols=98  Identities=12%  Similarity=0.085  Sum_probs=66.9

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      -++.+|.|....||++.+.. + .+++|...             ..+...|+++|+.+..  |..+ +++  +.+.....
T Consensus        96 ~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-------------~~~~~~E~~il~~l~H--pnIv-~~~~~~~~~~~~~  159 (391)
T PHA03212         96 ILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-------------RGGTATEAHILRAINH--PSII-QLKGTFTYNKFTC  159 (391)
T ss_pred             EEEEEcCCCCeEEEEEEECCCCCEEEEechh-------------hhhhHHHHHHHHhCCC--CCCC-CEeEEEEECCeeE
Confidence            56788999999999998863 3 78888421             1355779999988753  4433 333  23456678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++.   .|...+......     -.++.+|...|+-+|...
T Consensus       160 lv~e~~~~---~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~  202 (391)
T PHA03212        160 LILPRYKT---DLYCYLAAKRNIAICDILAIERSVLRAIQYLHENR  202 (391)
T ss_pred             EEEecCCC---CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999972   455555443322     256788889999999754

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=95.29  E-value=0.31  Score=37.52  Aligned_cols=103  Identities=17%  Similarity=0.153  Sum_probs=68.9

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~  112 (165)
                      .+.++.|....||++.+. ++ .+++|.-.....       -...+...|.+.|+.+.   ...+++++  +.+.....+
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~l   74 (253)
T cd05122           5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-------EKKEKIINEIQILKKCK---HPNIVKYYGSYLKKDELWI   74 (253)
T ss_pred             eeeeccCCceEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHHHHhCC---CCCEeEEEEEEecCCeEEE
Confidence            467888888899999986 44 788888753221       12356667777777665   23344444  345577889


Q ss_pred             EEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 048614          113 GMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~  151 (165)
                      +||+++  ...|.+.+...  ...    -.++.++...|+.+|..
T Consensus        75 ~~e~~~--~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~  117 (253)
T cd05122          75 VMEFCS--GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN  117 (253)
T ss_pred             EEecCC--CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC
Confidence            999998  35677766554  221    24677888888888873

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=95.29  E-value=0.29  Score=40.59  Aligned_cols=106  Identities=13%  Similarity=0.088  Sum_probs=62.7

Q ss_pred             ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHH-HHHhhccCCCCCceEE-EEcCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALA-LKEHGQLCPDHVPEVY-HFDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~-L~~~~~~~p~~vP~v~-~~D~~~~~~vM  114 (165)
                      .+|.|....||++.+. +| .++||.-.......    .-...+...|... ++...  -|..++-.. +.+.+...+||
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~~l~~~~--hp~iv~~~~~~~~~~~~~lv~   75 (325)
T cd05604           2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLN----RKEQKHIMAERNVLLKNVK--HPFLVGLHYSFQTTEKLYFVL   75 (325)
T ss_pred             ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHHhCC--CCCCccEEEEEecCCEEEEEE
Confidence            5788888999999875 45 78889765332211    0112233344433 22221  144333322 33557788999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++ + ..|...+..+...     -.++.+|...|+-+|...
T Consensus        76 e~~~-~-~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~g  116 (325)
T cd05604          76 DFVN-G-GELFFHLQRERSFPEPRARFYAAEIASALGYLHSIN  116 (325)
T ss_pred             cCCC-C-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998 3 3565666554432     246778899999999754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=95.28  E-value=0.38  Score=38.11  Aligned_cols=106  Identities=17%  Similarity=0.012  Sum_probs=67.2

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      -++.+|.|....||++.+. ++ .+++|.......       -.......|...|+....  |..++-. ++.+.+...+
T Consensus        13 ~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-------~~~~~~~~e~~~l~~~~h--~~ii~~~~~~~~~~~~~i   83 (267)
T cd06646          13 LIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG-------DDFSLIQQEIFMVKECKH--CNIVAYFGSYLSREKLWI   83 (267)
T ss_pred             hhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc-------chHHHHHHHHHHHHhcCC--CCeeeeeEEEEeCCEEEE
Confidence            5678898999999999875 44 688887653321       112345567777765532  3333222 2346677789


Q ss_pred             EEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  ...|.+.+.++.. .    -.++.++...|.-+|...
T Consensus        84 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  126 (267)
T cd06646          84 CMEYCG--GGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKG  126 (267)
T ss_pred             EEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  3466666654332 1    246778888888888754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=95.26  E-value=0.31  Score=40.41  Aligned_cols=106  Identities=12%  Similarity=0.032  Sum_probs=61.9

Q ss_pred             cCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhc-cCCCCCceEEE--EcCCCceEEE
Q 048614           40 VGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQ-LCPDHVPEVYH--FDRTMSLIGM  114 (165)
Q Consensus        40 l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~-~~p~~vP~v~~--~D~~~~~~vM  114 (165)
                      +|.|....||++.+. .| .++||......-. .   .-...+...|..+++.... -.|. ++.++.  .+.....+||
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~---~~~~~~~~~e~~~l~~~~~~~~p~-i~~~~~~~~~~~~~~lv~   75 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIV-A---KKEVAHTIGERNILVRTLLDESPF-IVGLKFSFQTDSDLYLVT   75 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHh-h---hhHHHHHHHHHHHHHHhccCCCCc-CcceEEEEecCCeEEEEE
Confidence            577888889999876 34 7888875321100 0   1122344456555544321 1233 333333  3566789999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++ + ..|...+......     ..++.+|...|+.+|...
T Consensus        76 e~~~-~-g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~  116 (330)
T cd05586          76 DYMS-G-GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYD  116 (330)
T ss_pred             cCCC-C-ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9997 3 3565656554332     235678888888888654

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG3021 consensus Predicted kinase [General function prediction only]

Probab=95.25  E-value=0.071  Score=44.29  Aligned_cols=88  Identities=18%  Similarity=0.119  Sum_probs=57.3

Q ss_pred             CCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHH--HHHHHHHhhccCCCCCceEEEE---cCCCceEEEe
Q 048614           41 GDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYF--EALALKEHGQLCPDHVPEVYHF---DRTMSLIGMR  115 (165)
Q Consensus        41 ~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~--E~~~L~~~~~~~p~~vP~v~~~---D~~~~~~vME  115 (165)
                      |||-+|.-=.-+++.|+|.||.-+..            .|..+  |.+.|.++.+.--..||+.+-.   ---.+.+|||
T Consensus        21 gggcI~~~r~ydtDaG~~FvK~nr~~------------~~~mfeGE~~sLeAi~sT~tv~vprpikvid~p~Ggs~lime   88 (313)
T KOG3021|consen   21 GGGCISDGRHYDTDAGKVFVKVNRSI------------ARDMFEGELASLEAIQSTETVLVPRPIKVIDLPGGGSSLIME   88 (313)
T ss_pred             CCceeccccccccCCccEEEEecccc------------chHHHhhHHHHHHHHHhcCceecCCceeeEecCCCceeeeee
Confidence            45555543233344569999876641            24444  4556777777544566665433   2357899999


Q ss_pred             cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ++.  +..+|.          -++.+|+.||.+|...
T Consensus        89 ~id--f~~lr~----------~~a~lG~qlAdmHl~n  113 (313)
T KOG3021|consen   89 HID--FQGLRS----------DAAKLGSQLADMHLKN  113 (313)
T ss_pred             hhh--cccchh----------HHHHHHHHHHHHhhhh
Confidence            996  766665          4788999999999665

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=95.25  E-value=0.18  Score=40.21  Aligned_cols=103  Identities=16%  Similarity=0.037  Sum_probs=62.8

Q ss_pred             ecCCCceeEEEEEEeCC---C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614           39 EVGDGNLNFVYIVVGSS---G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~---g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~  112 (165)
                      ++|.|....||++...+   + .+++|....-..      .-.......|..+|+.+..  |. +++++.  .+.....+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~l   72 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS------VQEQMKFLEEAQPYRSLQH--SN-LLQCLGQCTEVTPYLL   72 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCC------hHHHHHHHHHHHHHHhCCC--CC-EeeEEEEEcCCCCcEE
Confidence            57888888899997542   2 578885432110      1112345557777776643  44 344443  35566789


Q ss_pred             EEecCCCCchHHHHHHHcCCC------C----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIK------Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~------~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  ...|++.+.....      .    -.++.++...|+.+|...
T Consensus        73 v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  120 (269)
T cd05087          73 VMEFCP--LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN  120 (269)
T ss_pred             EEECCC--CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  3467776654221      1    146778888888888554

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=95.23  E-value=0.16  Score=42.11  Aligned_cols=107  Identities=16%  Similarity=0.019  Sum_probs=67.1

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      -+..+|.|....||++.+. +| .++||.........    .-...+...|..+|+...   ..++++++  +.+.+...
T Consensus         5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~i~~~~~---~~~i~~~~~~~~~~~~~~   77 (330)
T cd05601           5 VKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA----QETVSFFEEERDILSISN---SPWIPQLQYAFQDKDNLY   77 (330)
T ss_pred             EEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhCC---CCCCcceeeEEecCCeEE
Confidence            3577899999999999876 44 78888765322110    112344556666665542   23444443  33556678


Q ss_pred             EEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~  151 (165)
                      +||||++  ...|.+.+.+.  ...    ..++.+|...|..+|..
T Consensus        78 lv~e~~~--~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~  121 (330)
T cd05601          78 LVMEYQP--GGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM  121 (330)
T ss_pred             EEECCCC--CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  34676666553  222    23567888888888864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=95.22  E-value=0.26  Score=41.88  Aligned_cols=108  Identities=15%  Similarity=0.045  Sum_probs=67.9

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      .++.||.|....||++.+. ++ .+.||.-....-.    ..-...+...|.++|+....  |. +++++  +.+.+...
T Consensus         5 ~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~----~~~~~~~~~~E~~il~~~~h--~~-iv~~~~~~~~~~~~~   77 (382)
T cd05625           5 KIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVL----LRNQVAHVKAERDILAEADN--EW-VVRLYYSFQDKDNLY   77 (382)
T ss_pred             EEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhh----hHHHHHHHHHHHHHHHhCCC--Cc-CCeEEEEEEeCCEEE
Confidence            5788999999999999875 34 6888865421100    01123456678778776643  33 33333  34566789


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++ + ..|.+.+.+.... .    .++.+|...|.-+|...
T Consensus        78 lv~E~~~-g-g~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~  121 (382)
T cd05625          78 FVMDYIP-G-GDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMG  121 (382)
T ss_pred             EEEeCCC-C-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998 3 3566666554333 2    34567778888888754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=95.19  E-value=0.2  Score=41.56  Aligned_cols=105  Identities=15%  Similarity=0.162  Sum_probs=68.4

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE------cCC
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF------DRT  108 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~------D~~  108 (165)
                      .+.+|.|....||++.+. +| .+++|.-....     +-.-...+...|..+|+.+..  |. +++++.+      +..
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~-----~~~~~~~~~~~e~~~l~~l~h--~~-iv~~~~~~~~~~~~~~   81 (334)
T cd07855          10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAF-----DVPTLAKRTLRELKILRHFKH--DN-IIAIRDILRPPGADFK   81 (334)
T ss_pred             eeeeecCCCeEEEEEEEcCCCCEEEEEEecccc-----ccccchHHHHHHHHHHHhcCC--CC-ccCHHHhccccCCCCc
Confidence            467899999999999876 34 78888643211     111234566778888887762  33 3332221      334


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++ +  .+.+.+..+...     -.++.+|...|+.+|...
T Consensus        82 ~~~lv~e~~~-~--~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  127 (334)
T cd07855          82 DVYVVMDLME-S--DLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSAN  127 (334)
T ss_pred             eEEEEEehhh-h--hHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5679999997 2  577777655432     256778888999999765

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=95.19  E-value=0.32  Score=40.79  Aligned_cols=106  Identities=17%  Similarity=0.213  Sum_probs=66.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecC-ccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC-----
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQAL-PYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR-----  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~-p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~-----  107 (165)
                      .++.+|.|....||++.+. .| .++||... ++..      .-...+...|..+|+.+..  |..++-+-.|-.     
T Consensus        20 ~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~   91 (353)
T cd07850          20 NLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQN------VTHAKRAYRELVLMKLVNH--KNIIGLLNVFTPQKSLE   91 (353)
T ss_pred             EEEEeccCCCEEEEEEEECCCCCEEEEEecCccccC------hhHHHHHHHHHHHHHhcCC--CCCcceeeeeccCCCcc
Confidence            5788999999999999876 44 89999653 1111      1123466678888877643  333332222211     


Q ss_pred             --CCceEEEecCCCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHhcc
Q 048614          108 --TMSLIGMRYLEPPHIILRKGLIAGI---KYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 --~~~~~vMEdL~~~~~~lr~~l~~g~---~~~~~a~~iG~~La~~h~~t  152 (165)
                        ....+|||+++.   .+.+.+...-   ....++.+|...|+.+|...
T Consensus        92 ~~~~~~lv~e~~~~---~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~g  138 (353)
T cd07850          92 EFQDVYLVMELMDA---NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAG  138 (353)
T ss_pred             ccCcEEEEEeccCC---CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              235899999973   4555544321   12346888999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=95.17  E-value=0.62  Score=36.75  Aligned_cols=110  Identities=15%  Similarity=0.057  Sum_probs=65.9

Q ss_pred             EecCCCceeEEEEEEeCC-C-eEEEeecCccccccCC-CC-CCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           38 KEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGE-SW-PMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~-~~-~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      ..+|.|..+-||++.+.. + .+++|.-......... .+ .--.++...|...|+.+..  | .+++++.  .+.+...
T Consensus         6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~   82 (267)
T cd06628           6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH--E-NIVQYLGSSLDADHLN   82 (267)
T ss_pred             ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCC--C-CeeeEEEEEEeCCccE
Confidence            467888889999998753 4 7888865422211000 00 0011345566666766532  3 3444443  3667888


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++  ...|...+......     -.++.++...|..+|...
T Consensus        83 lv~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~  126 (267)
T cd06628          83 IFLEYVP--GGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRG  126 (267)
T ss_pred             EEEEecC--CCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999997  34676666553322     156778888888888543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=95.16  E-value=0.56  Score=35.54  Aligned_cols=105  Identities=19%  Similarity=0.080  Sum_probs=69.3

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      .+.++.|...-||++...+ + .+++|.......     + -...+...|.+.++.+..  |..++-+ +..+.....++
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~-~~~~~~~~e~~~~~~~~~--~~i~~~~~~~~~~~~~~~v   75 (225)
T smart00221        4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKT-----E-KQREEFLREIRILKKLKH--PNIVKLYGVFEDPEPLYLV   75 (225)
T ss_pred             eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccc-----h-HHHHHHHHHHHHHHhCCC--CChhhheeeeecCCceEEE
Confidence            4678888888999999875 4 899998663221     1 134677778888877732  4333322 22344778899


Q ss_pred             EecCCCCchHHHHHHHcCCC------CHHHHHHHHHHHHHHHhc
Q 048614          114 MRYLEPPHIILRKGLIAGIK------YPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~------~~~~a~~iG~~La~~h~~  151 (165)
                      ||+++  ...|.+.+.....      .-.++.++...++.+|..
T Consensus        76 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~  117 (225)
T smart00221       76 MEYCE--GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL  117 (225)
T ss_pred             EeccC--CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99998  3477776655332      135677788888888876

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=95.16  E-value=0.32  Score=38.94  Aligned_cols=106  Identities=14%  Similarity=0.058  Sum_probs=65.0

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-e----EEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCC
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-S----FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-s----vIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~  108 (165)
                      .++.+|.|....||++... +| .    +.||.......      .-...+...|...++.+.   ..+++.++. +...
T Consensus        11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~   81 (279)
T cd05109          11 KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS------PKANKEILDEAYVMAGVG---SPYVCRLLGICLTS   81 (279)
T ss_pred             eeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC------HHHHHHHHHHHHHHHhcC---CCCCceEEEEEcCC
Confidence            6788999999999999753 34 2    56666542221      111234455555555443   234444443 3345


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCC-C-----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIK-Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~-~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ...++||+++  ...+.+.+..+.. .     -.++.+|...|+.+|...
T Consensus        82 ~~~l~~~~~~--~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  129 (279)
T cd05109          82 TVQLVTQLMP--YGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR  129 (279)
T ss_pred             CcEEEEEcCC--CCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6678999997  3467777765432 1     257888999999999765

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=95.16  E-value=0.23  Score=41.14  Aligned_cols=105  Identities=13%  Similarity=0.104  Sum_probs=63.4

Q ss_pred             ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHH-HHhhccCCCCCceEE--EEcCCCceEE
Q 048614           39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALAL-KEHGQLCPDHVPEVY--HFDRTMSLIG  113 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L-~~~~~~~p~~vP~v~--~~D~~~~~~v  113 (165)
                      .+|.|....||++.+. +| .++||.-......    ..-...+...|...+ +...  -| ++++++  +.+.+...+|
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~~e~~~~~~~l~--hp-~iv~~~~~~~~~~~~~lv   74 (323)
T cd05575           2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAIL----KKKEQKHIMAERNVLLKNVK--HP-FLVGLHYSFQTADKLYFV   74 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh----hhhHHHHHHHHHHHHHhhCC--CC-CCCCeeEEEEeCCEEEEE
Confidence            5788888999999886 44 7999975432110    111223344444432 2221  13 334443  2356778899


Q ss_pred             EecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      |||++  ...|...+......+     .++.+|...|.-+|...
T Consensus        75 ~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~g  116 (323)
T cd05575          75 LDYVN--GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLN  116 (323)
T ss_pred             EcCCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998  346766666554332     36778889999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=95.15  E-value=0.25  Score=48.01  Aligned_cols=109  Identities=18%  Similarity=0.183  Sum_probs=71.4

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~~~~~  112 (165)
                      .++.+|.|....||++.+.. | .++||.-.....    +.+....|...|.++++.+..  |..++-.-. .+.+...+
T Consensus         6 Ii~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~----~~e~~~~rflrEi~ILs~L~H--PNIVkl~~v~~d~~~lyL   79 (932)
T PRK13184          6 IIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLS----ENPLLKKRFLREAKIAADLIH--PGIVPVYSICSDGDPVYY   79 (932)
T ss_pred             EEEEEecCCCEEEEEEEECCCCcEEEEEEECcccc----cCHHHHHHHHHHHHHHHhCCC--cCcCeEEEEEeeCCEEEE
Confidence            45788999999999998763 4 799998653221    122334577788888876642  444443322 35566789


Q ss_pred             EEecCCCCchHHHHHHHcC----C--------C----CHHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAG----I--------K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g----~--------~----~~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++  +.+|++.+...    .        .    .-.++.+|...|+.+|...
T Consensus        80 VMEY~e--GGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G  133 (932)
T PRK13184         80 TMPYIE--GYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG  133 (932)
T ss_pred             EEEcCC--CCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  34676665431    0        0    1246779999999999754

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=95.15  E-value=0.23  Score=41.72  Aligned_cols=107  Identities=16%  Similarity=0.154  Sum_probs=65.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR------  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------  107 (165)
                      .++.+|.|....||++.+. .| .++||.-..-...     .-...+...|..+|+.+..  |..++-.-.|..      
T Consensus        25 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~   97 (359)
T cd07876          25 QLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN-----QTHAKRAYRELVLLKCVNH--KNIISLLNVFTPQKSLEE   97 (359)
T ss_pred             EEEEeecCCCEEEEEEEEcCCCceeEEEEecccccc-----hhHHHHHHHHHHHHHhCCC--CCEeeeeeeeccCCCccc
Confidence            5688999999999999876 34 7999975421110     1223566778777776642  333222222222      


Q ss_pred             -CCceEEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhcc
Q 048614          108 -TMSLIGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 -~~~~~vMEdL~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~t  152 (165)
                       ....+|||+++.   .+.+.+...-.   ...++.+|...|+-+|...
T Consensus        98 ~~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~  143 (359)
T cd07876          98 FQDVYLVMELMDA---NLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG  143 (359)
T ss_pred             cceeEEEEeCCCc---CHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             235799999983   34444432211   2347788999999999764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=95.13  E-value=0.69  Score=37.48  Aligned_cols=107  Identities=16%  Similarity=0.040  Sum_probs=66.8

Q ss_pred             eEecCCCceeEEEEEEeCC---C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcC--CC
Q 048614           37 IKEVGDGNLNFVYIVVGSS---G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDR--TM  109 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~---g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~--~~  109 (165)
                      +..+|.|....||++.+..   + .++||.-.....    .+.--.++...|..+|+.+..  |..++-.-. .|.  ..
T Consensus         5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~----~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~   78 (316)
T cd07842           5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE----QYTGISQSACREIALLRELKH--ENVVSLVEVFLEHADKS   78 (316)
T ss_pred             EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc----cccCccHHHHHHHHHHHhcCC--CCccceEEEEeCCCCce
Confidence            4568899999999999854   3 799998765331    122233567778888877653  443332222 333  45


Q ss_pred             ceEEEecCCCCchHHHHHHHcC------CCC----HHHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAG------IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g------~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++.   .+.+.+...      ...    ..++.+|...|..+|...
T Consensus        79 ~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  128 (316)
T cd07842          79 VYLLFDYAEH---DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW  128 (316)
T ss_pred             EEEEEeCCCc---CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            7899999973   333433221      111    246778889999888654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=95.13  E-value=0.074  Score=44.72  Aligned_cols=106  Identities=15%  Similarity=0.147  Sum_probs=66.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      .++.+|.|....||++.+. +| .++||.-.....      .....+...|.++|+.+..  |. +.+++  +.+.....
T Consensus        78 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~  148 (353)
T PLN00034         78 RVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE------DTVRRQICREIEILRDVNH--PN-VVKCHDMFDHNGEIQ  148 (353)
T ss_pred             hhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc------HHHHHHHHHHHHHHHhCCC--CC-cceeeeEeccCCeEE
Confidence            4567999999999999875 44 799997532211      1123466778888877642  33 33333  33445667


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CCHHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI-KYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~-~~~~~a~~iG~~La~~h~~t  152 (165)
                      +||||+. .. .|+....... ....++.+|...|..+|...
T Consensus       149 lv~e~~~-~~-~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  188 (353)
T PLN00034        149 VLLEFMD-GG-SLEGTHIADEQFLADVARQILSGIAYLHRRH  188 (353)
T ss_pred             EEEecCC-CC-cccccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8999997 33 3433211111 12358889999999999754

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=95.12  E-value=0.33  Score=40.46  Aligned_cols=107  Identities=14%  Similarity=-0.017  Sum_probs=62.9

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -++.+|.|....||++.... + .+++|.-...-...    .........|..+++...   ...++.++.  .+.+...
T Consensus         5 i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~---~~~i~~l~~~~~~~~~~~   77 (331)
T cd05624           5 IIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLK----RAETACFREERNVLVNGD---CQWITTLHYAFQDENYLY   77 (331)
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHh----hHHHHHHHHHHHHHHhCC---CCCEeeEEEEEEcCCEEE
Confidence            35789999999999998763 3 68888653211000    111223344555554332   223444432  3556677


Q ss_pred             EEEecCCCCchHHHHHHHcC-CC-CH----HHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAG-IK-YP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g-~~-~~----~~a~~iG~~La~~h~~  151 (165)
                      +||||++  ...|.+.+.+. .. ..    .++.+|...|..+|..
T Consensus        78 lv~Ey~~--gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~  121 (331)
T cd05624          78 LVMDYYV--GGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL  121 (331)
T ss_pred             EEEeCCC--CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  34677777652 22 22    3456778888888854

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=95.11  E-value=0.4  Score=38.06  Aligned_cols=103  Identities=16%  Similarity=0.115  Sum_probs=63.8

Q ss_pred             ecCCCceeEEEEEEeCCC----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614           39 EVGDGNLNFVYIVVGSSG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~  112 (165)
                      ++|.|....||++...++    .+++|+......      .-...+...|.+.++.+..  |. +.+++  ..+.....+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~e~~~~~~l~h--~n-ii~~~~~~~~~~~~~l   72 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT------PDEQLLFLQEVQPYRELNH--PN-VLQCLGQCIESIPYLL   72 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCC------hHHHHHHHHHHHHHHhCCC--CC-cceEEEEECCCCceEE
Confidence            578899999999864322    678887542211      0112334556666665432  33 34444  345677899


Q ss_pred             EEecCCCCchHHHHHHHcCCC------C----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIK------Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~------~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...|++.+.....      .    -.++.+|...|+-+|...
T Consensus        73 v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (269)
T cd05042          73 VLEFCP--LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD  120 (269)
T ss_pred             EEEeCC--CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence            999997  4577777755321      1    246778888888888765

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=95.11  E-value=0.25  Score=40.88  Aligned_cols=106  Identities=9%  Similarity=-0.020  Sum_probs=63.8

Q ss_pred             EecCCC--ceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           38 KEVGDG--NLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        38 ~~l~~G--n~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      ..+|.|  ....||++.+. +| .++||.-..-.-     ..-..+....|.++|+.+..  |..++-. ++.+.+...+
T Consensus         4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--pniv~~~~~~~~~~~~~l   76 (327)
T cd08227           4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-----TNEMVTFLQGELHVSKLFNH--PNIVPYRATFIADNELWV   76 (327)
T ss_pred             hhccccccceEEEEEEeecccCcEEEEEEechhhc-----cHHHHHHHHHHHHHHHhcCC--CCeeeEEEEEEECCEEEE
Confidence            456777  45678898775 45 788897432110     00112344457777776533  4444332 3446677889


Q ss_pred             EEecCCCCchHHHHHHHcC--C-CC----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAG--I-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g--~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  +..+++.+...  . ..    -.++.+|...|+-+|...
T Consensus        77 v~e~~~--~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~  121 (327)
T cd08227          77 VTSFMA--YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG  121 (327)
T ss_pred             EEeccC--CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  44676666432  2 21    246778888999998654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=95.10  E-value=0.71  Score=36.17  Aligned_cols=106  Identities=20%  Similarity=0.051  Sum_probs=68.0

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      .++.+|.|....||++.+.. + .+++|.-....    .   -.......|.++|+.+..  |..++-. ++.+.....+
T Consensus         7 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~---~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~l   77 (262)
T cd06613           7 LIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP----G---DDFEIIQQEISMLKECRH--PNIVAYFGSYLRRDKLWI   77 (262)
T ss_pred             EEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc----h---hhHHHHHHHHHHHHhCCC--CChhceEEEEEeCCEEEE
Confidence            46788999999999998753 3 67777664211    1   134566777777776643  4433332 2346677788


Q ss_pred             EEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ...+...+...  ...    -.++.++...|+.+|...
T Consensus        78 ~~e~~~--~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~  121 (262)
T cd06613          78 VMEYCG--GGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG  121 (262)
T ss_pred             EEeCCC--CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998  34666655443  222    246777888888888654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=95.09  E-value=0.35  Score=39.14  Aligned_cols=109  Identities=12%  Similarity=0.017  Sum_probs=67.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~~~~~  112 (165)
                      .++.+|.|....||++.+. +| .++||.-.......    .-...+...|..+|+.+..  |..++-... .+.+...+
T Consensus         4 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~il~~l~~--~~iv~~~~~~~~~~~~~l   77 (285)
T cd05631           4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----RKGEAMALNEKRILEKVNS--RFVVSLAYAYETKDALCL   77 (285)
T ss_pred             EEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh----hhhHHHHHHHHHHHHhcCC--CcEEEEEEEEccCCeEEE
Confidence            4577899999999999875 45 78888754321100    0112345668888876643  333333333 35567789


Q ss_pred             EEecCCCCchHHHHHHHc-CC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIA-GI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~-g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++ + ..|...+.. +. ..     -.++.++...|+.+|...
T Consensus        78 v~e~~~-~-g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  122 (285)
T cd05631          78 VLTIMN-G-GDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER  122 (285)
T ss_pred             EEEecC-C-CcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997 3 356555533 11 12     246778888888898753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=95.07  E-value=0.35  Score=38.04  Aligned_cols=109  Identities=17%  Similarity=0.081  Sum_probs=66.7

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      ..+.+|.|....||++.+. .+ .+++|.-..-.-  ..+......+...|.++|+.+..  | .+.+++.  .+.+...
T Consensus         6 ~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~--~~~~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~   80 (263)
T cd06625           6 RGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPD--SPETKKEVNALECEIQLLKNLQH--E-RIVQYYGCLRDDETLS   80 (263)
T ss_pred             ccceecCCCceEEEEEEEcCCCcEEEEEEEeeccc--chhhHHHHHHHHHHHHHHHhCCC--C-CeeeeEEEEccCCeEE
Confidence            3467888888899999875 34 788886331110  01111122345567667765532  3 3344443  3667888


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ++||+++  ...+++.+......     -.++.++...|+.+|..
T Consensus        81 ~v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~  123 (263)
T cd06625          81 IFMEYMP--GGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN  123 (263)
T ss_pred             EEEEECC--CCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999997  34677776654332     24667788888888854

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=95.03  E-value=0.33  Score=39.35  Aligned_cols=105  Identities=11%  Similarity=0.070  Sum_probs=66.9

Q ss_pred             eEecCCCceeEEEEEEeCC-----------------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCC
Q 048614           37 IKEVGDGNLNFVYIVVGSS-----------------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDH   98 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-----------------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~   98 (165)
                      .+.+|.|....||++...+                 + .+.||.......      .-...+...|.+.|+.+..  |. 
T Consensus        10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~------~~~~~~~~~E~~~l~~l~~--~~-   80 (296)
T cd05095          10 KEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN------KNARNDFLKEIKIMSRLKD--PN-   80 (296)
T ss_pred             eeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC------HHHHHHHHHHHHHHHhCCC--CC-
Confidence            4678999999999985321                 1 466666542211      1123455678888877643  33 


Q ss_pred             CceEE--EEcCCCceEEEecCCCCchHHHHHHHcCCC----------------CHHHHHHHHHHHHHHHhcc
Q 048614           99 VPEVY--HFDRTMSLIGMRYLEPPHIILRKGLIAGIK----------------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        99 vP~v~--~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~----------------~~~~a~~iG~~La~~h~~t  152 (165)
                      +++++  +.+.+...++||+++  ..+|.+.+.+...                .-.++.+|...|+.+|...
T Consensus        81 i~~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~  150 (296)
T cd05095          81 IIRLLAVCITSDPLCMITEYME--NGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN  150 (296)
T ss_pred             cceEEEEEecCCccEEEEEeCC--CCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            33443  346677899999997  3467676655321                2356788889999999765

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=95.03  E-value=0.4  Score=38.61  Aligned_cols=68  Identities=13%  Similarity=0.028  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhc
Q 048614           80 RAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus        80 R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~vMEdL~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      +...|+.+++.+   -...+++++.+  +.....+||||++  ...|...+.+  +...    -.++.+|...|+-+|..
T Consensus        62 ~~~~~~~~~~~l---~h~niv~~~~~~~~~~~~~lv~ey~~--~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  136 (274)
T cd05076          62 AFFETASLMSQV---SHIHLAFVHGVCVRGSENIMVEEFVE--HGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK  136 (274)
T ss_pred             HHHHHHHHHhcC---CCCCeeeEEEEEEeCCceEEEEecCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence            334444444433   33445555554  5566789999998  3467666654  2222    24678888888888865


Q ss_pred             c
Q 048614          152 T  152 (165)
Q Consensus       152 t  152 (165)
                      .
T Consensus       137 ~  137 (274)
T cd05076         137 N  137 (274)
T ss_pred             C
Confidence            4

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=95.01  E-value=0.27  Score=41.37  Aligned_cols=106  Identities=16%  Similarity=0.117  Sum_probs=65.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      .++.+|.|....||++.+. .+ .++||.-.....     ..-...+...|...|+.+..  |..++-.-.+.       
T Consensus        28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~~ii~~~~~~~~~~~~~~  100 (364)
T cd07875          28 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-----NQTHAKRAYRELVLMKCVNH--KNIIGLLNVFTPQKSLEE  100 (364)
T ss_pred             EEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc-----CchhHHHHHHHHHHHHhcCC--CCccccceeecccccccc
Confidence            5678999999999999876 34 788997542211     12233567778888876642  33332221121       


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~  151 (165)
                      .....+||||++.   .+.+.+.....   ...++.++...|+.+|..
T Consensus       101 ~~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~  145 (364)
T cd07875         101 FQDVYIVMELMDA---NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA  145 (364)
T ss_pred             cCeEEEEEeCCCC---CHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhC
Confidence            1235799999983   34444433211   124788899999999965

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=95.01  E-value=0.46  Score=37.47  Aligned_cols=105  Identities=17%  Similarity=0.036  Sum_probs=66.8

Q ss_pred             cCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEec
Q 048614           40 VGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIGMRY  116 (165)
Q Consensus        40 l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~vMEd  116 (165)
                      +|.|....||++.+.. + .+++|.-....-. ..   -...+...|...|+.+..  |..++-+ ++.|.....++|||
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~---~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~   74 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIV-ET---GQQEHIFSEKEILEECNH--PFIVKLYRTFKDKKYIYMLMEY   74 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcch-hh---hHHHHHHHHHHHHHhCCC--CCEeeeeeeEEcCCccEEEEec
Confidence            4667778899999873 4 8999976532211 01   123567778777776642  4433322 34577788999999


Q ss_pred             CCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          117 LEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       117 L~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      .+  ...|.+.+.+....+     .++.+|...|+-+|...
T Consensus        75 ~~--~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~  113 (262)
T cd05572          75 CL--GGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRG  113 (262)
T ss_pred             CC--CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            97  457877776654332     35567788888888643

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=95.01  E-value=0.44  Score=38.77  Aligned_cols=108  Identities=13%  Similarity=-0.013  Sum_probs=69.4

Q ss_pred             eeEecCCCceeEEEEEEeC--------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-E
Q 048614           36 TIKEVGDGNLNFVYIVVGS--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-F  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~  105 (165)
                      -.+++|.|....||++...        .+ .+++|.......      .-...+...|..+|+.+... |..++-+-. .
T Consensus        19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~~i~~~~~~~~   91 (304)
T cd05101          19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT------EKDLSDLVSEMEMMKMIGKH-KNIINLLGACT   91 (304)
T ss_pred             ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc------hHHHHHHHHHHHHHHhhccC-CCchheeEEEe
Confidence            3478999999999988631        22 588887653321      11235677888888777443 544443322 2


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCC---------------------CHHHHHHHHHHHHHHHhcc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGIK---------------------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~---------------------~~~~a~~iG~~La~~h~~t  152 (165)
                      +.....++|||++  ..+|++.+.+...                     .-.++.+|...|+.+|...
T Consensus        92 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g  157 (304)
T cd05101          92 QDGPLYVIVEYAS--KGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK  157 (304)
T ss_pred             cCCceEEEEecCC--CCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            4445669999998  3477777765321                     1245778999999999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=95.01  E-value=0.23  Score=38.79  Aligned_cols=104  Identities=15%  Similarity=0.065  Sum_probs=65.2

Q ss_pred             cCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEEe
Q 048614           40 VGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGMR  115 (165)
Q Consensus        40 l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vME  115 (165)
                      +|.|....||++.+.+ | .+++|.......    .-.-..++...|.+.|+.+..  |..+ +++.  -+.....++||
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~~~e~~~l~~~~h--~~i~-~~~~~~~~~~~~~lv~e   73 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADM----IRKNQVDQVLTERDILSQAQS--PYVV-KLYYSFQGKKNLYLVME   73 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhh----hhhhHHHHHHHHHHHHHhCCC--cchh-HHHHheecCcEEEEEEe
Confidence            4678888999999874 5 899996542211    011234566677777776642  3322 2222  24455679999


Q ss_pred             cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +++  ...|+..+.+....     -.++.+|...|+.+|...
T Consensus        74 ~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~  113 (265)
T cd05579          74 YLP--GGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNG  113 (265)
T ss_pred             cCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            997  34776666553222     257788899999998654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=94.99  E-value=0.42  Score=38.55  Aligned_cols=105  Identities=15%  Similarity=0.090  Sum_probs=68.3

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC--CCc
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR--TMS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~--~~~  110 (165)
                      +..+|.|....||++.+.. + .+++|+-.....  ...   -..+...|...|+.+.  -|. ++.++.  .+.  ...
T Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~---~~~~~~~e~~~l~~l~--h~n-i~~~~~~~~~~~~~~~   81 (293)
T cd07843          10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKE--KEG---FPITSLREINILLKLQ--HPN-IVTVKEVVVGSNLDKI   81 (293)
T ss_pred             hhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccc--ccc---chhhHHHHHHHHHhcC--CCC-EEEEEEEEEecCCCcE
Confidence            4677888888999999863 4 788887642221  111   1234556888877665  233 444433  445  788


Q ss_pred             eEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~t  152 (165)
                      .++||+++ .  .|+..+.....  .    -.++.+|...|+.+|...
T Consensus        82 ~lv~e~~~-~--~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  126 (293)
T cd07843          82 YMVMEYVE-H--DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW  126 (293)
T ss_pred             EEEehhcC-c--CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999997 2  66666654321  1    257788899999999765

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=94.98  E-value=0.34  Score=39.08  Aligned_cols=107  Identities=19%  Similarity=0.077  Sum_probs=68.0

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCC--Cc
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRT--MS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~--~~  110 (165)
                      .++.+|.|..-.||++.+.. + .+++|.......      .-..++...|.+.|+.+..  |..++-.-. .+.+  ..
T Consensus         5 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~~   76 (287)
T cd06621           5 ELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN------PDLQKQILRELEINKSCKS--PYIVKYYGAFLDESSSSI   76 (287)
T ss_pred             EEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc------hHHHHHHHHHHHHHHhCCC--CCeeeeeeEEEccCCCeE
Confidence            56788999988999999863 4 788886542211      1234677788888877642  444443222 2333  46


Q ss_pred             eEEEecCCCCchHHHHHHH----cCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLI----AGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~----~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+||||++.  ..|.+.+.    .+...     -.++.+|...|+.+|...
T Consensus        77 ~lv~e~~~~--~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~  125 (287)
T cd06621          77 GIAMEYCEG--GSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK  125 (287)
T ss_pred             EEEEEecCC--CCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            799999973  35544332    12222     258889999999999654

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=94.98  E-value=0.72  Score=36.61  Aligned_cols=106  Identities=13%  Similarity=-0.003  Sum_probs=66.5

Q ss_pred             eeEecCCCceeEEEEEEeCC-C----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~  108 (165)
                      -.+.+|.|....||++.... |    .+.||.......      .-...+...|...|+.+..  |. +.+++.  .+..
T Consensus         8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~l~~l~h--~n-i~~~~~~~~~~~   78 (269)
T cd05065           8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT------EKQRRDFLSEASIMGQFDH--PN-IIHLEGVVTKSR   78 (269)
T ss_pred             EEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCC------HHHHHHHHHHHHHHHhCCC--cC-cceEEEEECCCC
Confidence            45678899999999998652 2    488888653211      1122456677777766532  43 333433  3556


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...++||+++  ...|.+.+....  ..    -.++.++...|+.+|...
T Consensus        79 ~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g  126 (269)
T cd05065          79 PVMIITEFME--NGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN  126 (269)
T ss_pred             ceEEEEecCC--CCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6688999997  346777665432  12    245677788888888653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=94.97  E-value=0.41  Score=39.66  Aligned_cols=106  Identities=9%  Similarity=0.011  Sum_probs=61.3

Q ss_pred             ecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~vM  114 (165)
                      .+|.|....||++.+.. + .+++|.-....-.    ..-...+...|...+  ...+-..++.+++  +.+.+...+||
T Consensus         2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~e~~~~--l~~~~h~~Iv~~~~~~~~~~~~~lv~   75 (325)
T cd05602           2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAIL----KKKEEKHIMSERNVL--LKNVKHPFLVGLHFSFQTADKLYFVL   75 (325)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHH----hhhHHHHHHHHHHHH--HHhCCCCCCCceeEEEEcCCeEEEEE
Confidence            57888889999998763 3 6888875422110    001112233333322  1222222333443  34567778999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++  ...|.+.+......     ..++.+|...|..+|...
T Consensus        76 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~g  116 (325)
T cd05602          76 DYIN--GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN  116 (325)
T ss_pred             eCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  34666666554432     236778888999999754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=94.96  E-value=0.57  Score=36.74  Aligned_cols=108  Identities=14%  Similarity=0.085  Sum_probs=67.4

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      .++.+|.|....||.+.+.. + .+++|-.......     .-...+...|.++|+.+..  |..+|-. ++.+.....+
T Consensus         4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-----~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~   76 (256)
T cd08221           4 PIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS-----EKERRDALNEIVILSLLQH--PNIIAYYNHFMDDNTLLI   76 (256)
T ss_pred             EeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc-----hhHHHHHHHHHHHHHhCCC--CCeeEEEeEEecCCeEEE
Confidence            46778889888777777653 4 7888875321110     0123456678888887642  4444433 3556677788


Q ss_pred             EEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++  ...|.+.+.+.  ...     -.++.++...|+.+|...
T Consensus        77 ~~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (256)
T cd08221          77 EMEYAN--GGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG  121 (256)
T ss_pred             EEEecC--CCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            899997  35677766553  111     245677888888888643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=94.96  E-value=0.46  Score=37.47  Aligned_cols=107  Identities=14%  Similarity=0.014  Sum_probs=63.3

Q ss_pred             EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 048614           38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~v  113 (165)
                      +.+|.|....||++.+. .| .++||.-....-.    -.-...+...|...+....  -...+++++.+  +.+...++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~e~~~~~~~~--~~~~i~~~~~~~~~~~~~~lv   75 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMI----AKNQVTNVKAERAIMMIQG--ESPYVAKLYYSFQSKDYLYLV   75 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhh----HHHHHHHHHHHHHHHhhcC--CCCCeeeeeeeEEcCCeEEEE
Confidence            56888989999999875 34 7888864311100    0011123344444443222  22344555544  44567899


Q ss_pred             EecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++  ...|...+..... .    -.++.+|...|..+|...
T Consensus        76 ~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~  117 (260)
T cd05611          76 MEYLN--GGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRG  117 (260)
T ss_pred             EeccC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99997  3467666655332 2    256788889999998754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=94.95  E-value=0.56  Score=39.06  Aligned_cols=107  Identities=16%  Similarity=0.120  Sum_probs=69.2

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-c-CCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-D-RTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D-~~~~~  111 (165)
                      .+..+|.|....||++.+. +| .++||.-......     .........|.+.|+.+..  |..++-.-.| + .....
T Consensus        14 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--pniv~~~~~~~~~~~~~~   86 (328)
T cd07856          14 DLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST-----PVLAKRTYRELKLLKHLRH--ENIISLSDIFISPLEDIY   86 (328)
T ss_pred             EEEeecccCCeEEEEEEECCCCCEEEEEEecccccc-----cchhHHHHHHHHHHHhcCC--CCeeeEeeeEecCCCcEE
Confidence            5788999999999999876 45 7899975432211     1122455668888877753  5544433323 2 45677


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++.   .+...+..+...    ..++.+|...|+.+|...
T Consensus        87 lv~e~~~~---~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~  128 (328)
T cd07856          87 FVTELLGT---DLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAG  128 (328)
T ss_pred             EEeehhcc---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999972   465555544432    246778888898888765

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=94.93  E-value=0.14  Score=40.73  Aligned_cols=111  Identities=14%  Similarity=0.087  Sum_probs=65.1

Q ss_pred             eEecCCCceeEEEEEEeCC--C-eEEEeecCcccccc---CCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCC
Q 048614           37 IKEVGDGNLNFVYIVVGSS--G-SFVIKQALPYVRCI---GESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTM  109 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~--g-svIvKqa~p~~r~~---~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~  109 (165)
                      ...+|.|....||++.+..  + .++||+-.......   ...+.....+...|...+...-.. |..++-+ ++.+...
T Consensus         5 ~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h-~~i~~~~~~~~~~~~   83 (269)
T cd08528           5 LEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRH-PNIVRYYKTFLENDR   83 (269)
T ss_pred             hhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCC-CCeeeEEeeEccCCe
Confidence            4568899999999999865  3 78889876443211   113344455566666655432211 3333222 2446677


Q ss_pred             ceEEEecCCCCchHHHHHH---H-cCCCC-----HHHHHHHHHHHHHHHh
Q 048614          110 SLIGMRYLEPPHIILRKGL---I-AGIKY-----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l---~-~g~~~-----~~~a~~iG~~La~~h~  150 (165)
                      ..++|||++  +..+.+.+   . .+...     -.++.++...|+-+|.
T Consensus        84 ~~lv~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~  131 (269)
T cd08528          84 LYIVMDLIE--GAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK  131 (269)
T ss_pred             EEEEEecCC--CCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            889999997  23444433   2 22222     2466678888888884

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=94.92  E-value=0.46  Score=39.58  Aligned_cols=108  Identities=14%  Similarity=0.026  Sum_probs=66.7

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -++.+|.|....||++.... + .+.||.-...-...    .....+...|..+++...   ..+++.++.  .+.....
T Consensus         5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~~~~~   77 (331)
T cd05597           5 ILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLK----RAETACFREERDVLVNGD---RRWITNLHYAFQDENNLY   77 (331)
T ss_pred             EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hhhHHHHHHHHHHHHhCC---CCCCCceEEEEecCCeEE
Confidence            36788999999999998763 4 78888754211100    112344556666665542   233444443  3556678


Q ss_pred             EEEecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  ...|.+.+.+ +...     ..++.+|...|+-+|...
T Consensus        78 lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  122 (331)
T cd05597          78 LVMDYYV--GGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG  122 (331)
T ss_pred             EEEecCC--CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  3467776654 2222     235667788888888654

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=94.89  E-value=0.46  Score=39.47  Aligned_cols=105  Identities=13%  Similarity=0.118  Sum_probs=66.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-------c
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-------D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-------D  106 (165)
                      -.+.+|.|....||++.+. +| .++||+-.+.-.      .....|...|..+|+.+..  |..++ ++.+       +
T Consensus         9 i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~niv~-~~~~~~~~~~~~   79 (336)
T cd07849           9 NLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH------QTFCQRTLREIKILRRFKH--ENIIG-ILDIIRPPSFES   79 (336)
T ss_pred             EEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc------chhHHHHHHHHHHHHhCCC--CCcCc-hhheeecccccc
Confidence            4567899999999999765 45 899998754321      1224567778888887762  43322 2211       1


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      .....++||+++.   .+...+..+....    .++.++...|+.+|...
T Consensus        80 ~~~~~lv~e~~~~---~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~  126 (336)
T cd07849          80 FNDVYIVQELMET---DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSAN  126 (336)
T ss_pred             cceEEEEehhccc---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            1234789999973   4555554443322    36678888888898765

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=94.88  E-value=0.41  Score=38.50  Aligned_cols=106  Identities=13%  Similarity=0.056  Sum_probs=67.9

Q ss_pred             eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 048614           36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D  106 (165)
                      .+..+|.|..+.||++...      .+ .+.+|.......      .-...+...|...|+.+..  |. +.+++.  .+
T Consensus         9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~ei~~l~~l~h--~~-iv~~~~~~~~   79 (288)
T cd05050           9 YVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS------ADMQADFQREAALMAEFDH--PN-IVKLLGVCAV   79 (288)
T ss_pred             ecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC------HHHHHHHHHHHHHHHhcCC--Cc-hheEEEEEcC
Confidence            4567888999999999863      23 688887652211      1112455567777776532  33 333443  34


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCC---------------------------CHHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIK---------------------------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~---------------------------~~~~a~~iG~~La~~h~~t  152 (165)
                      .+...++||+++  ..+|++.+..+..                           .-.++.+|...|+.+|...
T Consensus        80 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~  150 (288)
T cd05050          80 GKPMCLLFEYMA--YGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK  150 (288)
T ss_pred             CCccEEEEecCC--CCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            567799999998  3477777765321                           0257888999999999753

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=94.88  E-value=0.4  Score=37.56  Aligned_cols=107  Identities=19%  Similarity=0.110  Sum_probs=65.0

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-CC-CceE
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-RT-MSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-~~-~~~~  112 (165)
                      .+.+|.|...-||++.+.. + .++||........     .-..++...|.+.++.+..  |..++-...+. .+ ...+
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~l   77 (257)
T cd08223           5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS-----RRERKAAEQEAQLLSQLKH--PNIVAYRESWEGEDGLLYI   77 (257)
T ss_pred             EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC-----HHHHHHHHHHHHHHHhCCC--CCeeeeeeeecCCCCEEEE
Confidence            4677888888999998864 3 7888885321110     0122445667677766643  55444333333 23 2469


Q ss_pred             EEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++ + .+|.+.+.+.  ...     -.++.++...|+.+|...
T Consensus        78 v~e~~~-~-~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~  122 (257)
T cd08223          78 VMGFCE-G-GDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH  122 (257)
T ss_pred             EecccC-C-CcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997 3 4566666542  222     256778888888888754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=94.84  E-value=0.29  Score=38.69  Aligned_cols=107  Identities=12%  Similarity=0.025  Sum_probs=69.6

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      .+.+|.|....||++.+. +| .+++|....- +..     .-.......|+++++.+..  ...+++++  +.+.+...
T Consensus         6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~~~e~~~~~~l~~--~~~i~~~~~~~~~~~~~~   78 (280)
T cd05581           6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIK-----EKKVKYVKIEKEVLTRLNG--HPGIIKLYYTFQDEENLY   78 (280)
T ss_pred             eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccc-----hHHHHHHHHHHHHHHhccc--CCCchhHHHHhcCCceEE
Confidence            457899999999999886 44 7888875431 110     0112456667777776642  22344444  34667888


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++  ..+|++.+.+....     ..++.++...|+.+|...
T Consensus        79 lv~e~~~--~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~  122 (280)
T cd05581          79 FVLEYAP--NGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKG  122 (280)
T ss_pred             EEEcCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999996  35777777665332     356777888888888654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=94.83  E-value=0.29  Score=41.79  Aligned_cols=83  Identities=17%  Similarity=0.061  Sum_probs=52.9

Q ss_pred             eEecCCCceeEEEEEEe------CCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614           37 IKEVGDGNLNFVYIVVG------SSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~------~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      .+.+|.|....||++..      ..+ .+.||.-.+...      .-..++...|..+|+.+... | ++.+++.  .+.
T Consensus        40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~------~~~~~~~~~Ei~il~~l~~H-p-nIv~l~~~~~~~  111 (375)
T cd05104          40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH------LTEREALMSELKVLSYLGNH-I-NIVNLLGACTVG  111 (375)
T ss_pred             hheecCCccceEEEEEEeccccCccceeEEEEeccCCcC------cHHHHHHHHHHHHHHHhcCC-c-ceeeeeeeeccC
Confidence            57789999999999863      123 688887654321      11235667788888876432 3 3334433  466


Q ss_pred             CCceEEEecCCCCchHHHHHHH
Q 048614          108 TMSLIGMRYLEPPHIILRKGLI  129 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~  129 (165)
                      +...+||||++ . .+|.+.+.
T Consensus       112 ~~~~lv~E~~~-~-g~L~~~l~  131 (375)
T cd05104         112 GPTLVITEYCC-Y-GDLLNFLR  131 (375)
T ss_pred             Ccceeeehhcc-C-CcHHHHHH
Confidence            77889999997 2 35555443

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=94.82  E-value=0.73  Score=36.58  Aligned_cols=105  Identities=14%  Similarity=-0.020  Sum_probs=64.7

Q ss_pred             eEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC
Q 048614           37 IKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTM  109 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~  109 (165)
                      .+.+|.|....||++...    .+ .+++|...+....      -...+...|..+|+.+.  -|..+ +++.  .+.+.
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~e~~~l~~l~--h~~i~-~~~~~~~~~~~   79 (267)
T cd05066           9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTE------KQRRDFLSEASIMGQFD--HPNII-HLEGVVTKSKP   79 (267)
T ss_pred             eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCH------HHHHHHHHHHHHHHhCC--CCCcc-eEEEEEecCCc
Confidence            578899999999998763    12 5888876532210      11234555666676553  24433 3333  25566


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..++||+++  ..+|.+.+....  ..    -.++.++...|+.+|...
T Consensus        80 ~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  126 (267)
T cd05066          80 VMIVTEYME--NGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG  126 (267)
T ss_pred             cEEEEEcCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            778999997  346777665432  12    246677888888888653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=94.81  E-value=0.51  Score=37.62  Aligned_cols=106  Identities=14%  Similarity=0.056  Sum_probs=67.2

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~  112 (165)
                      ++.+|.|....||++.+.. + .++||.-......     .--.++...|.++|+.+..  |. +++++  +.+.+...+
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~-----~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~~~~i   77 (288)
T cd07833           6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD-----EDVKKTALREVKVLRQLRH--EN-IVNLKEAFRRKGRLYL   77 (288)
T ss_pred             EEEecccCCeeEEEEEeCCCCcEEEEehhhhhccc-----ccchhHHHHHHHHHHhcCC--CC-eeehhheEEECCEEEE
Confidence            5668888888899998763 4 7888865432211     1122577788888887762  32 22222  235567899


Q ss_pred             EEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++ . ..+.....+.. ..    -.++.+|...|+.+|...
T Consensus        78 v~e~~~-~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  120 (288)
T cd07833          78 VFEYVE-R-TLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN  120 (288)
T ss_pred             EEecCC-C-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998 3 45544333322 11    256778899999888654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=94.81  E-value=0.4  Score=38.53  Aligned_cols=104  Identities=16%  Similarity=0.213  Sum_probs=70.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      ....++.|..-.||++... .+ .+++|.......        ..++...|.+.|+.+..  | .+++++  +.+.....
T Consensus        23 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--------~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~   91 (286)
T cd06614          23 NLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--------NKELIINEILIMKDCKH--P-NIVDYYDSYLVGDELW   91 (286)
T ss_pred             HhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--------hHHHHHHHHHHHHHCCC--C-CeeEEEEEEEECCEEE
Confidence            3466788888889999887 34 899997642211        44567778887776653  3 333333  34667888


Q ss_pred             EEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++  ..+|.+.+....  ..    -.++.++...|+.+|...
T Consensus        92 lv~e~~~--~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~g  136 (286)
T cd06614          92 VVMEYMD--GGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN  136 (286)
T ss_pred             EEEeccC--CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  457877777653  22    247888899999999643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=94.80  E-value=0.21  Score=40.19  Aligned_cols=106  Identities=12%  Similarity=-0.011  Sum_probs=62.9

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      ++.+|.|....||++.+. ++ .+++|.-.....      .-...+...|.+.|+.+..  |..++-+ ++.+.+...+|
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv   77 (279)
T cd06619           6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT------VELQKQIMSELEILYKCDS--PYIIGFYGAFFVENRISIC   77 (279)
T ss_pred             eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC------hHHHHHHHHHHHHHHhCCC--CCeeeEEEEEEECCEEEEE
Confidence            467899999999999875 34 788885431110      1112345567777765532  4333322 34466777899


Q ss_pred             EecCCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLI-AGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~-~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++. . .+..... .......++.++...|+.+|...
T Consensus        78 ~e~~~~-~-~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  115 (279)
T cd06619          78 TEFMDG-G-SLDVYRKIPEHVLGRIAVAVVKGLTYLWSLK  115 (279)
T ss_pred             EecCCC-C-ChHHhhcCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999983 3 3322110 00112357888888999888765

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=94.79  E-value=0.5  Score=37.50  Aligned_cols=104  Identities=13%  Similarity=-0.053  Sum_probs=67.0

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~  112 (165)
                      ...+|.|-...||++.+.+ + .+++|.......       -...+...|.+.|+.+..  |..+ +++.  .+.+...+
T Consensus        13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~-------~~~~~~~~e~~~l~~l~h--~~iv-~~~~~~~~~~~~~l   82 (268)
T cd06624          13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS-------RYVQPLHEEIALHSYLKH--RNIV-QYLGSDSENGFFKI   82 (268)
T ss_pred             eEEEecCCceEEEEeEecCCCcEEEEEEecCCCH-------HHHHHHHHHHHHHHhcCC--CCee-eeeeeeccCCEEEE
Confidence            3578888888899998763 4 788886542211       122456677777776642  3333 3333  45567789


Q ss_pred             EEecCCCCchHHHHHHHcC--CC--C----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAG--IK--Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g--~~--~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ...|+..+.+.  ..  .    -.++.+|...|+-+|...
T Consensus        83 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  128 (268)
T cd06624          83 FMEQVP--GGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ  128 (268)
T ss_pred             EEecCC--CCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  45777777653  11  1    135678899999999653

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=94.78  E-value=0.65  Score=37.07  Aligned_cols=106  Identities=16%  Similarity=0.102  Sum_probs=68.8

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPE-VYHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~~~~~~v  113 (165)
                      ++.+|.|...-||++.+. +| .++||.-.....     ..-..++...|.+.|+.+..  |..++- -++.+.....++
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~E~~~l~~l~~--~~iv~~~~~~~~~~~~~iv   76 (283)
T cd07835           4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-----DEGVPSTAIREISLLKELNH--PNIVRLLDVVHSENKLYLV   76 (283)
T ss_pred             heEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-----cccchhHHHHHHHHHHhcCC--CCccCHhheeccCCeEEEE
Confidence            467899999999999875 45 788886532111     01122456678888887752  332221 145577888899


Q ss_pred             EecCCCCchHHHHHHHcCC--C-C----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGI--K-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~--~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++  . .++..+....  . .    -.++.++...|+.+|...
T Consensus        77 ~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~  119 (283)
T cd07835          77 FEFLD--L-DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR  119 (283)
T ss_pred             EeccC--c-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99996  2 5666665432  1 1    246778888999999764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=94.77  E-value=0.81  Score=35.96  Aligned_cols=105  Identities=12%  Similarity=-0.017  Sum_probs=66.1

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR------  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------  107 (165)
                      -++.++.|....||++.+. ++ .+++|.-....        ...++...|.++++.+...  ..+++++.+-.      
T Consensus        10 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~   79 (275)
T cd06608          10 LVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE--------DEEEEIKEEYNILRKYSNH--PNIATFYGAFIKKNPPG   79 (275)
T ss_pred             heeeecCCCCeEEEEEEECCCCcEEEEEEEecCc--------hhHHHHHHHHHHHHHhcCC--CChheEEEEEEecCCCC
Confidence            4577888888889999986 34 68888644221        1335677788888776432  34555555432      


Q ss_pred             --CCceEEEecCCCCchHHHHHHHc-----CCCCH----HHHHHHHHHHHHHHhcc
Q 048614          108 --TMSLIGMRYLEPPHIILRKGLIA-----GIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 --~~~~~vMEdL~~~~~~lr~~l~~-----g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                        ....++|||++  ...|.+.+..     +....    .++.++...|..+|...
T Consensus        80 ~~~~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~  133 (275)
T cd06608          80 NDDQLWLVMELCG--GGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK  133 (275)
T ss_pred             cceEEEEEEEcCC--CCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence              23579999998  3355554433     12222    36777888888888653

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=94.73  E-value=1.2  Score=35.44  Aligned_cols=108  Identities=13%  Similarity=0.023  Sum_probs=68.6

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC---
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTM---  109 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~---  109 (165)
                      +..+|.|....||++.... + .++||........  .   --......|...++.+.++--..+.+++.+  +.+.   
T Consensus         4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~--~---~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~   78 (287)
T cd07838           4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE--E---GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE   78 (287)
T ss_pred             EEEecccCceEEEEEEECCCCCEEEEEEecccccc--c---hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence            5678888888899999864 5 7888876533321  1   112345568888888877643344444433  4454   


Q ss_pred             --ceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614          110 --SLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 --~~~vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                        ..++||+++ .  .+.+.+....   ..    -.++.+|...|+.+|...
T Consensus        79 ~~~~l~~e~~~-~--~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~  127 (287)
T cd07838          79 LKLTLVFEHVD-Q--DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR  127 (287)
T ss_pred             ceeEEEehhcc-c--CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              789999997 3  4555554321   11    247778888888888764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=94.71  E-value=0.64  Score=36.46  Aligned_cols=107  Identities=19%  Similarity=0.190  Sum_probs=66.1

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      .++.+|.|..+-+|.+.+. +| .+++|.-.-. +..    .-...+...|.++|+.+..  |. +++++.  .+.....
T Consensus         4 ~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~-~~~----~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~~~~   75 (256)
T cd08218           4 KVKKIGEGSFGKAILVKSKEDGKQYVIKEINIS-KMS----PKEREESRKEVAVLSNMKH--PN-IVQYQESFEENGNLY   75 (256)
T ss_pred             EEEEeccCCceEEEEEEEcCCCCEEEEEEEEhH-hCC----hHHHHHHHHHHHHHHhCCC--CC-eeeeEeeecCCCeEE
Confidence            3678899999999999876 34 7888864311 100    1123456667777776643  33 334443  3556677


Q ss_pred             EEEecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++.  ...|...+....  ..     -.++.++...|+.+|...
T Consensus        76 lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (256)
T cd08218          76 IVMDYCE--GGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK  121 (256)
T ss_pred             EEEecCC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  345655554321  11     245778888898888543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=94.67  E-value=0.76  Score=37.39  Aligned_cols=106  Identities=18%  Similarity=0.149  Sum_probs=69.6

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      .++.+|.|....||++.+. ++ .+++|.....-       .-..++...|...|+....  |..++-. ++.+.+...+
T Consensus        23 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-------~~~~~~~~~e~~~l~~l~h--p~i~~~~~~~~~~~~~~l   93 (293)
T cd06647          23 RFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ-------QPKKELIINEILVMRENKH--PNIVNYLDSYLVGDELWV   93 (293)
T ss_pred             eeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc-------chHHHHHHHHHHHHhhcCC--CCeeehhheeeeCCcEEE
Confidence            5688999999999999865 34 78889753111       1123566677777766542  4333222 2346778899


Q ss_pred             EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...+++.+.+....    ..++.++...|+.+|...
T Consensus        94 v~e~~~--~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~g  135 (293)
T cd06647          94 VMEYLA--GGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ  135 (293)
T ss_pred             EEecCC--CCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997  34677776654322    346778888888888654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=94.65  E-value=0.94  Score=36.61  Aligned_cols=108  Identities=11%  Similarity=-0.049  Sum_probs=66.0

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      .+.+|.|....||++.+. ++ .+.+|+-.+..... .   -.......|.++|+.+..  |..++-. .+.+.+...++
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~-~---~~~~~~~~E~~il~~l~~--~~i~~~~~~~~~~~~~~lv   78 (285)
T cd05632           5 YRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKK-R---KGESMALNEKQILEKVNS--QFVVNLAYAYETKDALCLV   78 (285)
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhh-h---hHHHHHHHHHHHHHHcCC--cCceeEEEEEecCCEEEEE
Confidence            466899999999999876 34 68888754332110 0   112234568888877654  3444443 33455667799


Q ss_pred             EecCCCCchHHHHHHHc-CC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIA-GI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~-g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|+..+.. +.  ..    -.++.++...|..+|...
T Consensus        79 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  122 (285)
T cd05632          79 LTIMN--GGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN  122 (285)
T ss_pred             EEecc--CccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99998  3466655533 21  11    246677788888888654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=94.65  E-value=0.54  Score=38.47  Aligned_cols=106  Identities=18%  Similarity=0.110  Sum_probs=67.6

Q ss_pred             eEecCCCceeEEEEEEeC-CC---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCc
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~  110 (165)
                      .+.+|.|....||++.+. ++   .+.+|.......      .-...+...|.+.|..+... | .+++++.  .+....
T Consensus        12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~Ei~~l~~l~~h-~-~iv~~~~~~~~~~~~   83 (303)
T cd05088          12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS------KDDHRDFAGELEVLCKLGHH-P-NIINLLGACEHRGYL   83 (303)
T ss_pred             eeeecCCCCceEEEEEEccCCceeeEEEEEecccCC------HHHHHHHHHHHHHHHHhcCC-C-CcceEEEEECCCCCc
Confidence            467899999999999864 33   346666443221      12234666788888776432 3 4555543  355678


Q ss_pred             eEEEecCCCCchHHHHHHHcCC----------------C-----CHHHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGI----------------K-----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~----------------~-----~~~~a~~iG~~La~~h~~t  152 (165)
                      .++|||++  ..+|.+.+....                .     .-.++.+|...|+.+|...
T Consensus        84 ~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g  144 (303)
T cd05088          84 YLAIEYAP--HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ  144 (303)
T ss_pred             eEEEEeCC--CCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999997  346766665322                1     1246778889999999754

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=94.64  E-value=0.27  Score=41.23  Aligned_cols=107  Identities=15%  Similarity=0.118  Sum_probs=65.4

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      .++.+|.|....||++.+. .+ .+.||.-.....     -.-...|...|...|+....  |..++-.-.+.       
T Consensus        21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-----NQTHAKRAYRELVLMKCVNH--KNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             EEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-----ChHHHHHHHHHHHHHHHhCC--Cchhceeeeeeccccccc
Confidence            5678999999999999875 34 788886532111     11223566678887776642  43333222222       


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~t  152 (165)
                      .....++||+++.   .+.+.+...-.   ...++.+|...|+.+|...
T Consensus        94 ~~~~~lv~e~~~~---~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g  139 (355)
T cd07874          94 FQDVYLVMELMDA---NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG  139 (355)
T ss_pred             cceeEEEhhhhcc---cHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            1235799999973   34444432211   1247788999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=94.63  E-value=0.24  Score=39.59  Aligned_cols=105  Identities=19%  Similarity=0.180  Sum_probs=70.3

Q ss_pred             eEecCCCceeEEEEEEeC-----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CC
Q 048614           37 IKEVGDGNLNFVYIVVGS-----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RT  108 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~  108 (165)
                      .+.||.|..--|||+...     .+ .|+||...+....      -..+....|.+.|+.+ +. | ++.+++.+-  .+
T Consensus         4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~------~~~~~~~~e~~~l~~l-~h-~-ni~~~~g~~~~~~   74 (259)
T PF07714_consen    4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSE------EEEEEFLNEIQILRKL-RH-P-NIVKLYGFCIENE   74 (259)
T ss_dssp             EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSH------HHHHHHHHHHHHHHTH-SB-T-TBE-EEEEEESSS
T ss_pred             eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccc------ccceeeeecccccccc-cc-c-ccccccccccccc
Confidence            467899999999999877     12 7999998653321      1146777777777766 22 2 344455444  45


Q ss_pred             CceEEEecCCCCchHHHHHHHcC--C-CC----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAG--I-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g--~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++  ...|++.|...  . ..    -.++.+|+..|+-+|...
T Consensus        75 ~~~lv~e~~~--~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~  123 (259)
T PF07714_consen   75 PLFLVMEYCP--GGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN  123 (259)
T ss_dssp             SEEEEEE--T--TEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccccccc--ccccccccccccccccccccccccccccccccccccccc
Confidence            6799999997  44888888876  2 22    257888999999998754

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=94.63  E-value=0.26  Score=39.27  Aligned_cols=106  Identities=17%  Similarity=0.151  Sum_probs=66.2

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCC-ceEEEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHV-PEVYHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~v-P~v~~~D~~~~~~v  113 (165)
                      .+.+|.|....||++...+ + .++||+-.....      .....+...|...++.+... |..+ ..-++.+.+...+|
T Consensus         4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~e~~~l~~~~~h-~~i~~~~~~~~~~~~~~lv   76 (283)
T cd07830           4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY------SWEECMNLREVKSLRKLNEH-PNIVKLKEVFRENDELYFV   76 (283)
T ss_pred             heeeccCCceEEEEEEECCCCcEEEEEEehhhcc------chhHHHHHHHHHHHHhccCC-CCchhHHHHhhcCCcEEEE
Confidence            3567888889999999863 4 788997543221      12223344566666665422 2221 11234567888999


Q ss_pred             EecCCCCchHHHHHHHcCC--C-----CHHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGI--K-----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~--~-----~~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  . ++++.+....  .     ...++.++...|..+|...
T Consensus        77 ~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~  119 (283)
T cd07830          77 FEYME--G-NLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG  119 (283)
T ss_pred             EecCC--C-CHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99995  2 4666665533  2     1357778888888888765

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=94.60  E-value=0.51  Score=43.23  Aligned_cols=110  Identities=22%  Similarity=0.157  Sum_probs=67.4

Q ss_pred             cceeEecCCCceeEEEEEEeCC-C-eEEEeecCccccc-c-----------------CCC-CCCChH-------------
Q 048614           34 ALTIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRC-I-----------------GES-WPMTKE-------------   79 (165)
Q Consensus        34 ~~~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~-~-----------------~~~-~~l~~~-------------   79 (165)
                      +.+.++++.|.+--|++..+.+ | .|+||--+|.++. .                 .++ ..++..             
T Consensus       121 ~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~E  200 (537)
T PRK04750        121 DFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDE  200 (537)
T ss_pred             hcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHh
Confidence            4566899999999999999876 7 8999999988631 0                 011 112211             


Q ss_pred             -HHHHHHHHHHHhhccC----CCCCceEEEEcCCCceEEEecCCCCchHHHH--HHHc-CCCCHHHHHHHHHHH
Q 048614           80 -RAYFEALALKEHGQLC----PDHVPEVYHFDRTMSLIGMRYLEPPHIILRK--GLIA-GIKYPLLAEHMSEFM  145 (165)
Q Consensus        80 -R~~~E~~~L~~~~~~~----p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~--~l~~-g~~~~~~a~~iG~~L  145 (165)
                       ....|+..+..+.+..    .-+||++|.---...++|||++. +. .+.+  .+.+ |.....+|+......
T Consensus       201 lD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~-G~-~l~d~~~l~~~g~d~~~la~~~v~~~  272 (537)
T PRK04750        201 LDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMY-GI-PVSDVAALRAAGTDMKLLAERGVEVF  272 (537)
T ss_pred             hCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeec-Cc-cHHhHHHHHhcCCCHHHHHHHHHHHH
Confidence             1234555555554422    23799999644678999999998 33 3332  2333 333345666554433

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=94.58  E-value=0.6  Score=37.25  Aligned_cols=104  Identities=17%  Similarity=0.097  Sum_probs=64.9

Q ss_pred             ecCCCceeEEEEEEeCC-C---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614           39 EVGDGNLNFVYIVVGSS-G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~-g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~  112 (165)
                      .+|.|....||++.+.+ |   .+.+|.-.....      .-...+...|.+.++.+... |..+ +++.+  +.....+
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~~iv-~~~~~~~~~~~~~l   73 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS------KDDHRDFAGELEVLCKLGHH-PNII-NLLGACEHRGYLYL   73 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCC------HHHHHHHHHHHHHHHhhccC-CCee-eEEEEEecCCCceE
Confidence            46788888999998753 2   356665543221      12235677788888777543 4433 34332  3345679


Q ss_pred             EEecCCCCchHHHHHHHcCCC---------------------CHHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIK---------------------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~---------------------~~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++ + .+|.+.+.+...                     .-.++.++...|+-+|...
T Consensus        74 v~e~~~-~-~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~  132 (270)
T cd05047          74 AIEYAP-H-GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ  132 (270)
T ss_pred             EEEeCC-C-CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997 3 367777764321                     1246778888899898753

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=94.57  E-value=0.5  Score=39.33  Aligned_cols=106  Identities=13%  Similarity=0.100  Sum_probs=67.4

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC----
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR----  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~----  107 (165)
                      ....+|.|....||++.+. +| .++||+-.....     -.....+...|...|+.+..  |. +.+++.+  +.    
T Consensus         9 ~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~n-i~~~~~~~~~~~~~~   80 (337)
T cd07858           9 PIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-----NRIDAKRTLREIKLLRHLDH--EN-VIAIKDIMPPPHREA   80 (337)
T ss_pred             EEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-----ccchhHHHHHHHHHHHhcCC--CC-ccchHHheecccccc
Confidence            4568899999999999876 34 899998653221     11234567778888887643  32 2222211  11    


Q ss_pred             -CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          108 -TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 -~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                       ....++||+++.   .+.+.+.++...     -.++.+|...|.-+|...
T Consensus        81 ~~~~~lv~e~~~~---~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  128 (337)
T cd07858          81 FNDVYIVYELMDT---DLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSAN  128 (337)
T ss_pred             cCcEEEEEeCCCC---CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             235899999972   466666554332     246778888888888764

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=94.53  E-value=0.33  Score=38.79  Aligned_cols=104  Identities=13%  Similarity=0.049  Sum_probs=63.6

Q ss_pred             ecCCCceeEEEEEEeCCC----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           39 EVGDGNLNFVYIVVGSSG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      ++|.|....||++...++    .+++|.-.....      .-..++...|...++.+..  |..++-+ ...+.....+|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~e~~~~~~l~h--~~iv~~~~~~~~~~~~~lv   73 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS------SKEQNEFLQQGDPYRILQH--PNILQCLGQCVEAIPYLLV   73 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC------hHHHHHHHHHHHHHhccCC--cchhheEEEecCCCccEEE
Confidence            578888888998864322    466666432211      1123566777777765432  4444433 23455667899


Q ss_pred             EecCCCCchHHHHHHHcCCC----C-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIK----Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~----~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++  ..+|++.+.+...    .     -.++.+|...|.-+|...
T Consensus        74 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~  119 (268)
T cd05086          74 FEYCE--LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN  119 (268)
T ss_pred             EecCC--CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            99997  4577777765321    1     246778888999999654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=94.49  E-value=0.85  Score=36.37  Aligned_cols=102  Identities=12%  Similarity=0.085  Sum_probs=60.7

Q ss_pred             ecCCCceeEEEEEEeCC-------------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGSS-------------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH  104 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~-------------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      .+|.|..+.||+.....             . .+++|.-.+.-+       -...+...|+..|+.+.   -.++++++.
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-------~~~~~~~~~~~~l~~l~---hp~iv~~~~   71 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR-------DISLAFFETASMMRQVS---HKHIVLLYG   71 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh-------hHHHHHHHHHHHHHhCC---CCCEeeEEE
Confidence            57889999999987421             1 366665332111       11123444555554442   234555554


Q ss_pred             --EcCCCceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614          105 --FDRTMSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 --~D~~~~~~vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                        .+.....++|||++  ...|...+...  ...    -.++.+|...|+-+|...
T Consensus        72 ~~~~~~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  125 (262)
T cd05077          72 VCVRDVENIMVEEFVE--FGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD  125 (262)
T ss_pred             EEecCCCCEEEEeccc--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCC
Confidence              46678899999997  34566655432  222    257888999999999653

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=94.48  E-value=0.44  Score=38.30  Aligned_cols=107  Identities=15%  Similarity=0.086  Sum_probs=66.0

Q ss_pred             eeEecCCCceeEEEEEEeCCC------------------eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCC
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG------------------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPD   97 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g------------------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~   97 (165)
                      -++.+|.|....||++.+...                  .+++|.-..-.      -.-..++...|.++|+.+..  |.
T Consensus         9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~------~~~~~~~~~~e~~~l~~l~~--~~   80 (296)
T cd05051           9 FVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA------SDNAREDFLKEVKILSRLSD--PN   80 (296)
T ss_pred             ccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc------CHHHHHHHHHHHHHHHhcCC--CC
Confidence            467889999999999887532                  24555422111      01122445567777776643  43


Q ss_pred             CCceE-EEEcCCCceEEEecCCCCchHHHHHHHcCC-----------CC-----HHHHHHHHHHHHHHHhcc
Q 048614           98 HVPEV-YHFDRTMSLIGMRYLEPPHIILRKGLIAGI-----------KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        98 ~vP~v-~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~-----------~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .++-+ ++.+.....++||+++  ..+|.+.+.+..           ..     -.++.++...|+-+|...
T Consensus        81 i~~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~  150 (296)
T cd05051          81 IARLLGVCTVDPPLCMIMEYME--NGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN  150 (296)
T ss_pred             EeEEEEEEecCCCcEEEEecCC--CCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            33322 2234578899999997  357777776543           11     246778888899999765

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=94.46  E-value=0.7  Score=37.42  Aligned_cols=108  Identities=11%  Similarity=0.015  Sum_probs=65.0

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~~~~~~v  113 (165)
                      .+.+|.|....||.+.+. .+ .++||.-.+.....    .-...+...|..+|+.+..  |..++-...+ +.+...++
T Consensus         5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~il~~l~~--~~i~~~~~~~~~~~~~~lv   78 (285)
T cd05630           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----RKGESMALNEKQILEKVNS--RFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccc----hHHHHHHHHHHHHHHhCCC--CCeeeeeEEEecCCEEEEE
Confidence            456899999999998876 34 78888644221100    0112344568888876643  4444444333 44566799


Q ss_pred             EecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++  ...|++.+....  ..     -.++.++...|+-+|...
T Consensus        79 ~e~~~--g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  122 (285)
T cd05630          79 LTLMN--GGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER  122 (285)
T ss_pred             EEecC--CCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99997  346666653321  12     135677788888888643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=94.42  E-value=0.78  Score=36.63  Aligned_cols=105  Identities=11%  Similarity=0.039  Sum_probs=67.0

Q ss_pred             eEecCCCceeEEEEEEeCC-----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---cC
Q 048614           37 IKEVGDGNLNFVYIVVGSS-----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF---DR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---D~  107 (165)
                      .+.+|.|....||++....     + .+++|.......      .....+...|...|+.+.  .|..++ ++++   +.
T Consensus        11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~------~~~~~~~~~e~~~l~~l~--h~ni~~-~~~~~~~~~   81 (280)
T cd05043          11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHAS------EIQVTLLLQESCLLYGLS--HQNILP-ILHVCIEDG   81 (280)
T ss_pred             eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCC------HHHHHHHHHHHHHHHhCC--CCCCCe-EEEEEecCC
Confidence            3667888888999998754     4 788887542221      122355666777666552  244444 4443   34


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC--------CC-----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGI--------KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~--------~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ....+++|+.+  ...|+..+....        ..     ..++.+|...|+-+|...
T Consensus        82 ~~~~~~~~~~~--~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~  137 (280)
T cd05043          82 EPPFVLYPYMN--WGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG  137 (280)
T ss_pred             CCCEEEEEcCC--CCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            67888999987  457777765431        11     257788899999998654

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=94.36  E-value=0.94  Score=37.05  Aligned_cols=108  Identities=15%  Similarity=-0.027  Sum_probs=68.5

Q ss_pred             eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcC
Q 048614           36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~  107 (165)
                      -.+.+|.|....||++..-      .+ .+.||.-.....      .-..++...|.++|+.+... |..++-+ ++.+.
T Consensus        39 ~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~~iv~~~~~~~~~  111 (302)
T cd05055          39 FGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH------SSEREALMSELKIMSHLGNH-ENIVNLLGACTIG  111 (302)
T ss_pred             EcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC------hHHHHHHHHHHHHHHhccCC-CCcceEEEEEecC
Confidence            3567899999999998742      12 466665442221      12235677888888877432 4433332 23455


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCC--C-----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIK--Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~--~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ....++|||++  ...|.+.+.....  .     -.++.+|...|+.+|...
T Consensus       112 ~~~~lv~e~~~--~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~  161 (302)
T cd05055         112 GPILVITEYCC--YGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN  161 (302)
T ss_pred             CceEEEEEcCC--CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            66789999997  3477777654221  1     247778888999999764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=94.36  E-value=0.27  Score=39.01  Aligned_cols=105  Identities=13%  Similarity=0.042  Sum_probs=62.2

Q ss_pred             EecCCCceeEEEEEEeCCC----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 048614           38 KEVGDGNLNFVYIVVGSSG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-------  106 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      +.+|.|....||++.+...    .+.+|.-......     .-..++...|.+.|+.+.   -..+.+++.+.       
T Consensus         5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~-----~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~   76 (272)
T cd05075           5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICT-----RSEMEDFLSEAVCMKEFD---HPNVMRLIGVCLQTVESE   76 (272)
T ss_pred             cccCcccCceEEEeEEccCCCeeeEEEEecccCcCC-----HHHHHHHHHHHHHHHhCC---CCCcceEEEEEccCCccc
Confidence            4688899999999987643    3666655432110     011345556777776653   23455555431       


Q ss_pred             -CCCceEEEecCCCCchHHHHHHHc------CCC-----CHHHHHHHHHHHHHHHhcc
Q 048614          107 -RTMSLIGMRYLEPPHIILRKGLIA------GIK-----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 -~~~~~~vMEdL~~~~~~lr~~l~~------g~~-----~~~~a~~iG~~La~~h~~t  152 (165)
                       .....++|||++ . ..|...+..      ...     .-.++.+|...|+-+|...
T Consensus        77 ~~~~~~~v~e~~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  132 (272)
T cd05075          77 GYPSPVVILPFMK-H-GDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS  132 (272)
T ss_pred             CCCCcEEEEEeCC-C-CcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             123579999997 2 356555531      111     1246778888899999654

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=94.33  E-value=0.82  Score=36.16  Aligned_cols=106  Identities=16%  Similarity=0.066  Sum_probs=65.4

Q ss_pred             eeEecCCCceeEEEEEEeCC-C----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCC
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~  108 (165)
                      ..+.+|.|....||++.+.. +    .+++|.......      .-...+...|.+.|+.+..  | ++.+++  ..+.+
T Consensus         9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~   79 (268)
T cd05063           9 KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT------EKQRQDFLSEASIMGQFSH--H-NIIRLEGVVTKFK   79 (268)
T ss_pred             EeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC------HHHHHHHHHHHHHHhcCCC--C-CeeEEEEEEccCC
Confidence            45678989888999998742 2    477776643221      0112345567666665532  3 233333  33556


Q ss_pred             CceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...++||+++  ...|+..+.+.  ...    -.++.++...|..+|...
T Consensus        80 ~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~  127 (268)
T cd05063          80 PAMIITEYME--NGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN  127 (268)
T ss_pred             CcEEEEEcCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6789999998  34677776543  211    256778888888888665

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=94.33  E-value=0.58  Score=37.88  Aligned_cols=105  Identities=13%  Similarity=0.093  Sum_probs=66.4

Q ss_pred             eEecCCCceeEEEEEEeCC-------------C---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc
Q 048614           37 IKEVGDGNLNFVYIVVGSS-------------G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP  100 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-------------g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP  100 (165)
                      .+.+|.|....||++...+             +   .++||...+....      -..++...|.++|+.+..  | .++
T Consensus        10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~ei~~l~~l~h--~-~i~   80 (295)
T cd05097          10 KEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTK------TARNDFLKEIKIMSRLKN--P-NII   80 (295)
T ss_pred             hhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCH------HHHHHHHHHHHHHHhCCC--C-CcC
Confidence            3678999999999987532             1   4778877643211      112355667777776643  3 344


Q ss_pred             eEEE--EcCCCceEEEecCCCCchHHHHHHHcCC------------CC-----HHHHHHHHHHHHHHHhcc
Q 048614          101 EVYH--FDRTMSLIGMRYLEPPHIILRKGLIAGI------------KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       101 ~v~~--~D~~~~~~vMEdL~~~~~~lr~~l~~g~------------~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +++.  .+.....+||||++  ...|.+.+....            ..     -.++.++...|+-+|...
T Consensus        81 ~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  149 (295)
T cd05097          81 RLLGVCVSDDPLCMITEYME--NGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN  149 (295)
T ss_pred             eEEEEEcCCCccEEEEecCC--CCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC
Confidence            4443  35667789999998  346666654321            01     246788889999999765

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=94.27  E-value=0.94  Score=35.95  Aligned_cols=106  Identities=12%  Similarity=0.066  Sum_probs=68.5

Q ss_pred             eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 048614           36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      .++.+|.|....||++...      +. .+++|.....      ...--..+...|.++|+.+..  |. +++++.+  |
T Consensus         9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~   79 (275)
T cd05046           9 EITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKT------KDENLQSEFRRELDMFRKLSH--KN-VVRLLGLCRE   79 (275)
T ss_pred             eeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCc------cchHHHHHHHHHHHHHHhcCC--cc-eeeeEEEECC
Confidence            5677899999999999853      11 5777754311      111224567788888887743  33 3445544  5


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC---------CC-----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGI---------KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~---------~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+...+|||+++  ...|++.+....         ..     ..++.+|...|+-+|...
T Consensus        80 ~~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~  137 (275)
T cd05046          80 AEPHYMILEYTD--LGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR  137 (275)
T ss_pred             CCcceEEEEecC--CCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC
Confidence            567899999997  457888776533         11     246678888888888553

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=94.26  E-value=0.65  Score=37.54  Aligned_cols=108  Identities=12%  Similarity=0.048  Sum_probs=66.1

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~~~~  111 (165)
                      .++.+|.|....||++.+. ++ .+.||+-.... ..     .....+...|..+|+.++.  |..++-... -+.+...
T Consensus         4 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~   76 (285)
T cd05605           4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK-----RKGEAMALNEKQILEKVNS--RFVVSLAYAYETKDALC   76 (285)
T ss_pred             EEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhh-----hhhHHHHHHHHHHHHhcCC--CCEeeeeeeecCCCeEE
Confidence            3567899999999999876 34 68888754321 11     1112344568888877753  444443322 3556788


Q ss_pred             EEEecCCCCchHHHHHHHc-CC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIA-GI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~-g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||+.  ...|...+.. +. ..     -.++.++...|.-+|...
T Consensus        77 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  122 (285)
T cd05605          77 LVLTLMN--GGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER  122 (285)
T ss_pred             EEEeccC--CCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  3456555533 21 22     135677788888888543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PHA03211 serine/threonine kinase US3; Provisional

Probab=94.24  E-value=0.82  Score=40.79  Aligned_cols=98  Identities=13%  Similarity=0.060  Sum_probs=67.0

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -...+|.|....||++.... + .|+||...             ..+...|+++|+.+..  | ++.+++.  .+.....
T Consensus       173 i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-------------~~~~~~E~~iL~~L~H--p-nIv~l~~~~~~~~~~~  236 (461)
T PHA03211        173 IHRALTPGSEGCVFESSHPDYPQRVVVKAGW-------------YASSVHEARLLRRLSH--P-AVLALLDVRVVGGLTC  236 (461)
T ss_pred             EEEEEccCCCeEEEEEEECCCCCEEEEeccc-------------ccCHHHHHHHHHHCCC--C-CCCcEEEEEEECCEEE
Confidence            45679999999999999874 3 79999521             1234568888887643  3 3444443  4567788


Q ss_pred             EEEecCCCCchHHHHHHHcCC--C----CHHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI--K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~--~----~~~~a~~iG~~La~~h~~t  152 (165)
                      ++||++..   .|...+....  .    .-.++.+|...|+.+|...
T Consensus       237 lv~e~~~~---~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g  280 (461)
T PHA03211        237 LVLPKYRS---DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG  280 (461)
T ss_pred             EEEEccCC---CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999972   4555554421  1    1368889999999999764

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=94.23  E-value=0.91  Score=36.58  Aligned_cols=110  Identities=18%  Similarity=0.160  Sum_probs=67.3

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRT  108 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~  108 (165)
                      +++ -++.+|.|....||++.+. ++ .++||........  .   ....+...|.++|+.+..  |..++-. +..+..
T Consensus         8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~---~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~   80 (311)
T cd07866           8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK--D---GFPITALREIKILKKLKH--PNVVPLIDMAVERP   80 (311)
T ss_pred             ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCC--C---CcchhHHHHHHHHHhcCC--CCccchhhheeccc
Confidence            345 4567999999999999875 34 7999986543321  1   112345678888887743  4333321 122222


Q ss_pred             --------CceEEEecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          109 --------MSLIGMRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 --------~~~~vMEdL~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                              ...++|||.+.   .+...+.. +...     ..++.+|...|+.+|...
T Consensus        81 ~~~~~~~~~~~lv~~~~~~---~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~  135 (311)
T cd07866          81 DKSKRKRGSVYMVTPYMDH---DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH  135 (311)
T ss_pred             ccccccCceEEEEEecCCc---CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                    34899999972   34454443 2222     246778888899998754

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=94.21  E-value=0.76  Score=42.04  Aligned_cols=123  Identities=17%  Similarity=0.089  Sum_probs=74.8

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC-CCe-EEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS-SGS-FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FD  106 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~gs-vIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D  106 (165)
                      .++. .+.+||-|----||.+.-. .|. +-+|-    ++...-.-.=-+.-.+.|..+|....   ...|-++|+  -|
T Consensus       140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~----LkKS~M~~~~Qv~hV~aERdiL~~~d---s~~vVKLyYsFQD  212 (550)
T KOG0605|consen  140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKI----LKKSEMLKKNQVEHVRAERDILAEVD---SPWVVKLYYSFQD  212 (550)
T ss_pred             cccchhheeeccccceeEEEEEEccCCcEEeeec----ccHHHHHhhhhHHHHHHHHHHhhhcC---CCcEEEEEEEecC
Confidence            4455 7889999999999999765 453 33332    22110001112355677888886622   334555553  47


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCCH-HH----HHHHHHHHHHHHhcc---------------------cccccCch
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIKYP-LL----AEHMSEFMAKTLFYT---------------------SLLYRTTT  160 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~~-~~----a~~iG~~La~~h~~t---------------------sd~~l~~~  160 (165)
                      +++--+|||||+  +..++..|+.....+ +.    ++++--++..+|...                     |||+|+..
T Consensus       213 ~~~LYLiMEylP--GGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~g  290 (550)
T KOG0605|consen  213 KEYLYLIMEYLP--GGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTG  290 (550)
T ss_pred             CCeeEEEEEecC--CccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccch
Confidence            788889999998  458888888865543 22    223334455556543                     88888765


Q ss_pred             hhh
Q 048614          161 EHK  163 (165)
Q Consensus       161 ~~k  163 (165)
                      ..|
T Consensus       291 l~~  293 (550)
T KOG0605|consen  291 LDK  293 (550)
T ss_pred             hhh
Confidence            544

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=94.19  E-value=0.97  Score=37.36  Aligned_cols=110  Identities=12%  Similarity=0.015  Sum_probs=66.5

Q ss_pred             EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCC-------CCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcC
Q 048614           38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGE-------SWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDR  107 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~-------~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~  107 (165)
                      ..+|.|....||++.+. .| .++||...........       +...-..+...|.++|+.+..  |..++-. ++.+.
T Consensus        15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~   92 (335)
T PTZ00024         15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH--ENIMGLVDVYVEG   92 (335)
T ss_pred             hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC--cceeeeeEEEecC
Confidence            45888888899999876 34 7888875422110000       000111245667777776643  3333222 23466


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +...++||+++.   .+.+.+......     -.++.++...|..+|...
T Consensus        93 ~~~~lv~e~~~~---~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~  139 (335)
T PTZ00024         93 DFINLVMDIMAS---DLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWY  139 (335)
T ss_pred             CcEEEEEecccc---CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            778899999972   466666543322     357888888999998765

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=94.19  E-value=0.78  Score=36.53  Aligned_cols=105  Identities=19%  Similarity=0.219  Sum_probs=61.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      .++.+|.|....||++.+. +| .+++|+...-...      -...+...|.+.+..... .|..+ +++  +.+.....
T Consensus         5 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~e~~~~~~~~~-~~~iv-~~~~~~~~~~~~~   76 (283)
T cd06617           5 VIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS------QEQKRLLMDLDISMRSVD-CPYTV-TFYGALFREGDVW   76 (283)
T ss_pred             EEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc------HHHHHHHHHHHHHHHHcC-CCCee-eeeEEEecCCcEE
Confidence            4577899999999999876 45 8999976533211      112345555554222111 23333 333  34566778


Q ss_pred             EEEecCCCCchHHHHHHH----cCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLI----AGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~----~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ++|||++.   .+.+.+.    .+...     -.++.+|...|..+|..
T Consensus        77 lv~e~~~~---~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  122 (283)
T cd06617          77 ICMEVMDT---SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK  122 (283)
T ss_pred             EEhhhhcc---cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            99999973   3333332    22222     25678888889999864

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=94.18  E-value=0.52  Score=36.98  Aligned_cols=103  Identities=13%  Similarity=-0.039  Sum_probs=66.6

Q ss_pred             ecCCCceeEEEEEEeCC--C---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           39 EVGDGNLNFVYIVVGSS--G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~--g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      .+|.|..+.||++...+  +   .+.||........      -...+...|...|+.+..  |..+.-. +.++ ....+
T Consensus         2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~-~~~~~   72 (257)
T cd05040           2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS------DIMDDFLKEAAIMHSLDH--ENLIRLYGVVLT-HPLMM   72 (257)
T ss_pred             cCCccCcccEEeeeEecCCCCceEEEEeecCCcccH------HHHHHHHHHHHHHhhcCC--CCccceeEEEcC-CeEEE
Confidence            57889999999997642  2   4788876643321      234567778788776643  3332211 2344 67789


Q ss_pred             EEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ...|++.+.+..   ..    ..++.++...|+.+|...
T Consensus        73 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  117 (257)
T cd05040          73 VTELAP--LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR  117 (257)
T ss_pred             EEEecC--CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997  457777776533   11    246678899999888764

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=94.17  E-value=1.1  Score=36.60  Aligned_cols=110  Identities=15%  Similarity=0.036  Sum_probs=69.7

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeCC--------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGSS--------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV  102 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~~--------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v  102 (165)
                      +.+ -.+++|.|....||++...+        + .+++|.-.+...      .-...+...|.+.|+.+... |. ++++
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~e~~~l~~l~~h-~~-i~~~   89 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT------EKDLSDLISEMEMMKMIGKH-KN-IINL   89 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC------hHHHHHHHHHHHHHHHhcCC-CC-EeeE
Confidence            345 44789999999999997531        1 477776554321      11235666788888776443 33 3333


Q ss_pred             EE--EcCCCceEEEecCCCCchHHHHHHHcCC----------------CC-----HHHHHHHHHHHHHHHhcc
Q 048614          103 YH--FDRTMSLIGMRYLEPPHIILRKGLIAGI----------------KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       103 ~~--~D~~~~~~vMEdL~~~~~~lr~~l~~g~----------------~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +.  .+.....+|||+++  ...|++.+....                ..     -.++.++...|+-+|...
T Consensus        90 ~~~~~~~~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g  160 (307)
T cd05098          90 LGACTQDGPLYVIVEYAS--KGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK  160 (307)
T ss_pred             EEEEecCCceEEEEecCC--CCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            32  34466779999998  347777776531                11     146888999999999753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=94.16  E-value=0.41  Score=43.19  Aligned_cols=103  Identities=20%  Similarity=0.150  Sum_probs=72.3

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT--MSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~--~~~~  112 (165)
                      -+++||.|+.--||....... ++-+|.-.+-        .++.+-...|+.+|+.+.-   ..+-++|..=..  .--|
T Consensus       210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~--------~m~~~~f~~Ea~iMk~L~H---~~lV~l~gV~~~~~piyI  278 (468)
T KOG0197|consen  210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG--------SMSPEAFLREAQIMKKLRH---EKLVKLYGVCTKQEPIYI  278 (468)
T ss_pred             HHHHhcCCccceEEEEEEcCCCcccceEEecc--------ccChhHHHHHHHHHHhCcc---cCeEEEEEEEecCCceEE
Confidence            356899999999999988755 6777765543        3555666689999987754   223444444333  3589


Q ss_pred             EEecCCCCchHHHHHHHc--CCC-----CHHHHHHHHHHHHHHHhc
Q 048614          113 GMRYLEPPHIILRKGLIA--GIK-----YPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~--g~~-----~~~~a~~iG~~La~~h~~  151 (165)
                      ||||++  ...|++.|..  |..     .-.+|.||+.-|+-+...
T Consensus       279 VtE~m~--~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~  322 (468)
T KOG0197|consen  279 VTEYMP--KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK  322 (468)
T ss_pred             EEEecc--cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC
Confidence            999998  4588899987  332     236899998888766543

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=94.16  E-value=0.48  Score=38.60  Aligned_cols=106  Identities=12%  Similarity=0.096  Sum_probs=68.0

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      ....+|.|....||++.+. .+ .++||...    .   ...-..++...|...|+....  |..++-. .+.+.+...+
T Consensus        26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~----~---~~~~~~~~~~~e~~~l~~l~h--~~ii~~~~~~~~~~~~~l   96 (292)
T cd06658          26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMD----L---RKQQRRELLFNEVVIMRDYHH--ENVVDMYNSYLVGDELWV   96 (292)
T ss_pred             hhhcccCCCCeEEEEEEECCCCCEEEEEEEe----c---chHHHHHHHHHHHHHHHhCCC--CcHHHHHHheecCCeEEE
Confidence            4677899999999999875 34 78888532    1   111223455567777766532  3322211 3446778899


Q ss_pred             EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ...+...+..+...    -.++.+|...|+.+|...
T Consensus        97 v~e~~~--~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~  138 (292)
T cd06658          97 VMEFLE--GGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQG  138 (292)
T ss_pred             EEeCCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  34666666555432    257788888999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=94.15  E-value=1.1  Score=34.92  Aligned_cols=107  Identities=20%  Similarity=0.122  Sum_probs=66.4

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      .+.++.|...-||++.+.. | .+++|.-... +..    .-..++...|+..|+.+..  |..++-. ...+.....++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~-~~~----~~~~~~~~~E~~~l~~~~h--~~i~~~~~~~~~~~~~~lv   77 (257)
T cd08225           5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLT-KMP----VKEKEASKKEVILLAKMKH--PNIVTFFASFQENGRLFIV   77 (257)
T ss_pred             EEEecCCCcceEEEEEEcCCCceEEEEEeeHh-hcc----chhhHHHHHHHHHHHhCCC--CChhhhhheeccCCeEEEE
Confidence            4678888888999998863 4 7888864321 110    1123456678888877753  3322222 23355667899


Q ss_pred             EecCCCCchHHHHHHHcCC--C-C----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGI--K-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~--~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|.+.+....  . .    -.++.++...|+-+|...
T Consensus        78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (257)
T cd08225          78 MEYCD--GGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK  121 (257)
T ss_pred             EecCC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99997  356666665422  1 1    245678888888888643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=94.15  E-value=1.1  Score=36.94  Aligned_cols=108  Identities=13%  Similarity=0.072  Sum_probs=65.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      ....+|.|....||++.+. .| .+++|.-......    ..-...+...|.+.|+.+..  |..++-. ++.+.+...+
T Consensus        25 ~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~----~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~l   98 (313)
T cd06633          25 GLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQ----TNEKWQDIIKEVKFLQQLKH--PNTIEYKGCYLKEHTAWL   98 (313)
T ss_pred             cceeeccCCCeEEEEEEECCCCcEEEEEEEeccccC----chHHHHHHHHHHHHHHhCCC--CCCccEEEEEEeCCEEEE
Confidence            4567999999999999875 34 6787865322111    11122355667777777642  3333222 2346677889


Q ss_pred             EEecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++   .+-..+.. +...     -.++.+|...|+-+|...
T Consensus        99 v~e~~~~---~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g  141 (313)
T cd06633          99 VMEYCLG---SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN  141 (313)
T ss_pred             EEecCCC---CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999973   23333332 2221     136678888888888765

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=94.09  E-value=1.2  Score=36.81  Aligned_cols=106  Identities=16%  Similarity=0.134  Sum_probs=68.5

Q ss_pred             eEecCCCceeEEEEEEeCC---C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-----C
Q 048614           37 IKEVGDGNLNFVYIVVGSS---G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-----R  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~---g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-----~  107 (165)
                      .+.+|.|....||++.+..   + .+++|.-.....     -.....+...|.++|+.+... | .+++++.++     .
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~~h-~-~iv~~~~~~~~~~~~   77 (332)
T cd07857           5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS-----KKILAKRALRELKLLRHFRGH-K-NITCLYDMDIVFPGN   77 (332)
T ss_pred             EEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc-----cchhHHHHHHHHHHHHHhcCC-C-Chheeeeeeeecccc
Confidence            4678889999999999762   4 788887542221     122345777899888877432 3 344555432     1


Q ss_pred             -CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          108 -TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 -~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                       ....++||+++ .  .|.+.+..+..+     -.++.+|...|..+|...
T Consensus        78 ~~~~~~~~e~~~-~--~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g  125 (332)
T cd07857          78 FNELYLYEELME-A--DLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSAN  125 (332)
T ss_pred             CCcEEEEEeccc-C--CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             23467778776 2  566766655443     247788899999999765

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=94.06  E-value=0.81  Score=36.19  Aligned_cols=104  Identities=13%  Similarity=0.032  Sum_probs=65.3

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c------
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D------  106 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D------  106 (165)
                      .+.+|.|....||++.... + .+++|.-...        .-...+...|...|+..... |.. .+++.+  +      
T Consensus        11 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~--------~~~~~~~~~e~~~l~~~~~h-~~i-~~~~~~~~~~~~~~~   80 (272)
T cd06637          11 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--------GDEEEEIKQEINMLKKYSHH-RNI-ATYYGAFIKKNPPGM   80 (272)
T ss_pred             HHheeecCCeEEEEEEEcCCCcEEEEEEEEcC--------CccHHHHHHHHHHHHHhcCC-CCe-eeEeeEEeecCCCCC
Confidence            4567888888899998753 3 6888864311        12235677788877766332 333 333322  1      


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .....++||+++  ...|.+.+...  ...     -.++.++...|+.+|...
T Consensus        81 ~~~~~iv~e~~~--~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~  131 (272)
T cd06637          81 DDQLWLVMEFCG--AGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK  131 (272)
T ss_pred             CcEEEEEEEcCC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            234679999998  34676666652  222     247788999999999764

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>PTZ00284 protein kinase; Provisional

Probab=94.05  E-value=0.92  Score=39.86  Aligned_cols=104  Identities=12%  Similarity=0.013  Sum_probs=65.7

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCC---CCCceEEEEc---C
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCP---DHVPEVYHFD---R  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p---~~vP~v~~~D---~  107 (165)
                      -+..||.|....||++.+.. + .|.||.-....        ........|..+|+.+...-.   ..++.++.|-   .
T Consensus       133 i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~--------~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~  204 (467)
T PTZ00284        133 ILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP--------KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET  204 (467)
T ss_pred             EEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch--------hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC
Confidence            45679999999999998763 4 78899753211        112345668888887765321   1244444332   2


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHh
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~  150 (165)
                      ....+|||++++   .+.+.+.+...+     ..++.+|...|.-+|.
T Consensus       205 ~~~~iv~~~~g~---~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~  249 (467)
T PTZ00284        205 GHMCIVMPKYGP---CLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHT  249 (467)
T ss_pred             ceEEEEEeccCC---CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            356789998873   344445443222     2577888899999995

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=94.04  E-value=0.64  Score=38.20  Aligned_cols=105  Identities=14%  Similarity=0.102  Sum_probs=69.4

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC----
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT----  108 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~----  108 (165)
                      .+.+|.|....||++.+.+ | .++||.-.+....     .....+...|.+.|+.+.  .|..++ ++.+  +.+    
T Consensus         5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-----~~~~~~~~~e~~~l~~l~--~~~i~~-~~~~~~~~~~~~~   76 (330)
T cd07834           5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDD-----LIDAKRILREIKLLRHLR--HENIIG-LLDILRPPSPEDF   76 (330)
T ss_pred             eeeecCCCCeEEEEEEeCCCCcEEEEEeecccccc-----chhhhhHHHHHHHHHhcC--Ccchhh-hhhhhcccCcccc
Confidence            4678888889999999864 4 7999976643321     233467778888888775  243322 2222  222    


Q ss_pred             -CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          109 -MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 -~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                       ...++||+++ .  .+.+.+.++...     -.++.+|...|+.+|...
T Consensus        77 ~~~~lv~e~~~-~--~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~g  123 (330)
T cd07834          77 NDVYIVTELME-T--DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSAN  123 (330)
T ss_pred             cceEEEecchh-h--hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             4589999997 2  577777665332     237788888899888765

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=93.99  E-value=0.32  Score=38.52  Aligned_cols=103  Identities=12%  Similarity=0.030  Sum_probs=61.4

Q ss_pred             ecCCCceeEEEEEEeCC-C--------eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC
Q 048614           39 EVGDGNLNFVYIVVGSS-G--------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRT  108 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~-g--------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~  108 (165)
                      .+|.|....||++.... +        .+++|....-.       .-..++...|...|+....  |..+.-. +..+.+
T Consensus         2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~~~h--~~iv~~~~~~~~~~   72 (258)
T cd05078           2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-------RNYSESFFEAASMMSQLSH--KHLVLNYGVCVCGD   72 (258)
T ss_pred             CCCcccchhheeeeecccccccccccchhhHHhhcchh-------HHHHHHHHHHHHHHHhCCC--CChhheeeEEEeCC
Confidence            57888889999997642 1        24444432111       1122345556666665432  3333222 344557


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++  ...|.+.+..+..  .    -.++.+|...|+.+|...
T Consensus        73 ~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (258)
T cd05078          73 ESIMVQEYVK--FGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKG  120 (258)
T ss_pred             CcEEEEecCC--CCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8899999997  3477777765331  1    246788889999998654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>PHA03209 serine/threonine kinase US3; Provisional

Probab=93.96  E-value=0.93  Score=38.27  Aligned_cols=98  Identities=14%  Similarity=0.133  Sum_probs=65.9

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      .+..+|.|...-||++.... + .+++|....             .+...|+.+|+.+..  | .+++++  +.+.....
T Consensus        70 ~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~-------------~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~~~~~  133 (357)
T PHA03209         70 VIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK-------------GTTLIEAMLLQNVNH--P-SVIRMKDTLVSGAITC  133 (357)
T ss_pred             EEEEecCCCCeEEEEEEECCCCceEEEEeCCc-------------cccHHHHHHHHhCCC--C-CCcChhheEEeCCeeE
Confidence            56788999999999998864 3 788886321             233568888877653  3 334443  44667788


Q ss_pred             EEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++..   .+...+... ...     -.++.+|...|+.+|...
T Consensus       134 lv~e~~~~---~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  177 (357)
T PHA03209        134 MVLPHYSS---DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR  177 (357)
T ss_pred             EEEEccCC---cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999973   444555442 221     257788999999999764

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=93.96  E-value=1.1  Score=36.11  Aligned_cols=105  Identities=16%  Similarity=0.089  Sum_probs=66.9

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      .++.+|.|....||++.+. +| .+++|.......   .   -...+...|...|+.+..  |. +++++  +.+.+...
T Consensus         9 ~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~---~~~~~~~~e~~~l~~l~h--~n-i~~~~~~~~~~~~~~   79 (291)
T cd07870           9 NLEKLGEGSYATVYKGISRINGQLVALKVISMKTE---E---GVPFTAIREASLLKGLKH--AN-IVLLHDIIHTKETLT   79 (291)
T ss_pred             EEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc---C---CCcHHHHHHHHHHHhcCC--CC-EeEEEEEEecCCeEE
Confidence            5678999999999999765 34 899998643221   1   112355678888877642  32 33444  34566778


Q ss_pred             EEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++.   .+...+...  ...    ..++.+|...|+.+|...
T Consensus        80 lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  123 (291)
T cd07870          80 FVFEYMHT---DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH  123 (291)
T ss_pred             EEEecccC---CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999972   333334332  111    246778888899898765

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=93.93  E-value=0.92  Score=36.18  Aligned_cols=107  Identities=15%  Similarity=0.072  Sum_probs=67.8

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~  111 (165)
                      .++.+|.|....||++.+.+ | .+++|.-....     ....-.+....|.++|+.+..  |. ++++  ++.+.....
T Consensus         5 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~   76 (286)
T cd07846           5 NLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESE-----DDKMVKKIAMREIRMLKQLRH--EN-LVNLIEVFRRKKRLY   76 (286)
T ss_pred             EeeeeccCCCeEEEEEEECCCCCEEEEEeHhhcc-----CcchhhHHHHHHHHHHHhcCC--cc-hhhHHHhcccCCeEE
Confidence            45778999999999999863 4 78888743211     112223455667778777643  22 2222  234667789


Q ss_pred             EEEecCCCCchHHHHHHHcCC-C----CHHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI-K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~-~----~~~~a~~iG~~La~~h~~t  152 (165)
                      ++|||++  ...+........ .    .-.++.+|...|+.+|...
T Consensus        77 lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  120 (286)
T cd07846          77 LVFEFVD--HTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN  120 (286)
T ss_pred             EEEecCC--ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  345655443332 1    2356778889999999765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=93.91  E-value=0.93  Score=36.55  Aligned_cols=106  Identities=19%  Similarity=0.165  Sum_probs=65.6

Q ss_pred             eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 048614           36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D  106 (165)
                      -++.+|.|....||++...      .+ .+.||.-.....      .-...+...|..+|+.+.  .| ++++++.  .+
T Consensus        10 i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~e~~~l~~l~--~~-~i~~~~~~~~~   80 (288)
T cd05061          10 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS------LRERIEFLNEASVMKGFT--CH-HVVRLLGVVSK   80 (288)
T ss_pred             eeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC------HHHHHHHHHHHHHHHhCC--CC-CeeeEEEEEcC
Confidence            4678999999999998542      12 577775321110      011234556777776664  24 4555553  45


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCC---------------CHHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIK---------------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~---------------~~~~a~~iG~~La~~h~~t  152 (165)
                      .....++|||++  ..+|.+.+.....               .-.++.+|...|+-+|...
T Consensus        81 ~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  139 (288)
T cd05061          81 GQPTLVVMELMA--HGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK  139 (288)
T ss_pred             CCCcEEEEeCCC--CCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            667899999997  3467777654210               1246778888888888754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=93.87  E-value=0.47  Score=38.74  Aligned_cols=107  Identities=15%  Similarity=0.024  Sum_probs=65.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~  109 (165)
                      .++.+|.|....||++.+. +|     .+++|...+-      ..+-...+...|...++.+..  |..+.-.-.+....
T Consensus        11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~~~e~~~~~~l~h--~niv~~~~~~~~~~   82 (303)
T cd05110          11 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET------TGPKANVEFMDEALIMASMDH--PHLVRLLGVCLSPT   82 (303)
T ss_pred             eccccccCCCccEEEEEEecCCCcceeeEEEEecccc------CCHHHHHHHHHHHHHHHhCCC--CCcccEEEEEcCCC
Confidence            5667999999999999764 23     2455654321      111222344556666665532  55444444444566


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC-C-----CHHHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGI-K-----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~-~-----~~~~a~~iG~~La~~h~~t  152 (165)
                      ..++||+++ . ..+.+.+.... .     .-.++.++...|+.+|...
T Consensus        83 ~~~v~e~~~-~-g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~  129 (303)
T cd05110          83 IQLVTQLMP-H-GCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR  129 (303)
T ss_pred             ceeeehhcC-C-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            789999998 3 35666665532 1     1356788899999999764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=93.86  E-value=0.47  Score=36.90  Aligned_cols=104  Identities=15%  Similarity=0.046  Sum_probs=65.6

Q ss_pred             cCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCCceEEEec
Q 048614           40 VGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HFDRTMSLIGMRY  116 (165)
Q Consensus        40 l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~~~~~~vMEd  116 (165)
                      +|.|...-||++...+ + .+++|.-....-.    -....++...|...|+...  .|..++-.- +-+.....++||+
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~v~e~   74 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKII----KRKEVEHTLTERNILSRIN--HPFIVKLHYAFQTEEKLYLVLEY   74 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhc----chHHHHHHHHHHHHHHHcC--CCcHHHHHHHeecCCeeEEEEec
Confidence            4677777899998763 4 7888864322110    0124568888888887776  243333222 2355667999999


Q ss_pred             CCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhc
Q 048614          117 LEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       117 L~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~  151 (165)
                      ++  ..+|.+.+..... .    ..++.++...|..+|..
T Consensus        75 ~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~  112 (250)
T cd05123          75 AP--GGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSL  112 (250)
T ss_pred             CC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            97  3477777765532 2    24566778888888763

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=93.83  E-value=1.1  Score=37.05  Aligned_cols=105  Identities=16%  Similarity=0.246  Sum_probs=65.1

Q ss_pred             EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE----cCCCce
Q 048614           38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF----DRTMSL  111 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~----D~~~~~  111 (165)
                      +.+|.|....||++.+. +| .++||.-....+.  .   -...+...|...|+.+... |..++ ++.+    +.....
T Consensus        13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~--~---~~~~~~~~E~~~l~~l~~h-~ni~~-~~~~~~~~~~~~~~   85 (337)
T cd07852          13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRN--A---TDAQRTFREIMFLQELGDH-PNIVK-LLNVIKAENDKDIY   85 (337)
T ss_pred             HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCc--c---hhhhhhhHHHHHHHHhcCC-CCccc-eeeeeccCCCceEE
Confidence            45677777789999876 34 7888976432221  1   1123455688888776222 44444 4433    223468


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++ .  .|...+..+...    -.++.+|...|+.+|...
T Consensus        86 lv~e~~~-~--~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  127 (337)
T cd07852          86 LVFEYME-T--DLHAVIRANILEDVHKRYIMYQLLKALKYIHSGN  127 (337)
T ss_pred             EEecccc-c--CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997 2  666666555322    147788899999998753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=93.83  E-value=0.97  Score=36.18  Aligned_cols=104  Identities=14%  Similarity=0.103  Sum_probs=65.2

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~  112 (165)
                      +..+|.|....||++.+.. + .+++|.-....       .-...+...|.+.|+.+..  |. +++++  +.+.....+
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~h--~~-ii~~~~~~~~~~~~~~   79 (282)
T cd06643          10 IGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS-------EEELEDYMVEIDILASCDH--PN-IVKLLDAFYYENNLWI   79 (282)
T ss_pred             HhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC-------HHHHHHHHHHHHHHHHCCC--CC-eeeEEEEEeeCCEEEE
Confidence            3568888889999998874 4 45555542111       1123456667777776642  33 33333  556778899


Q ss_pred             EEecCCCCchHHHHHHHc--CCC----CHHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIA--GIK----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~--g~~----~~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++ + ..+...+.+  +..    ...++.+|...|+.+|...
T Consensus        80 v~e~~~-~-~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~  123 (282)
T cd06643          80 LIEFCA-G-GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK  123 (282)
T ss_pred             EEEecC-C-CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998 3 356555543  211    1347778888888898754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=93.77  E-value=2.3  Score=34.22  Aligned_cols=107  Identities=12%  Similarity=0.025  Sum_probs=65.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cC-----
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DR-----  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~-----  107 (165)
                      .+..+|.|....||++.+. ++ .++||.-.....    .... ..+...|.+.|+.+..  |..++-.-.+ +.     
T Consensus        16 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~----~~~~-~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~~   88 (310)
T cd07865          16 KLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE----KEGF-PITALREIKILQLLKH--ENVVNLIEICRTKATPYN   88 (310)
T ss_pred             EEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC----cCCc-hhHHHHHHHHHHhCCC--CCccceEEEEeccccccc
Confidence            5678999999999999876 34 788886432111    1111 2344568888876643  5544433222 22     


Q ss_pred             ---CCceEEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614          108 ---TMSLIGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ---~~~~~vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                         ....+|||+++.   .+.+.+.... ..     -.++.+|...|..+|...
T Consensus        89 ~~~~~~~lv~e~~~~---~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  139 (310)
T cd07865          89 RYKGSFYLVFEFCEH---DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK  139 (310)
T ss_pred             CCCceEEEEEcCCCc---CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               234899999983   4555554432 11     257788888998888764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat

Probab=93.77  E-value=0.19  Score=44.54  Aligned_cols=117  Identities=18%  Similarity=0.157  Sum_probs=74.1

Q ss_pred             cceeEecCC--CceeEEEEEEeC------C-C---eEEEeecC--ccc---cccCC--CCCCChHH------------HH
Q 048614           34 ALTIKEVGD--GNLNFVYIVVGS------S-G---SFVIKQAL--PYV---RCIGE--SWPMTKER------------AY   82 (165)
Q Consensus        34 ~~~v~~l~~--Gn~N~v~rv~~~------~-g---svIvKqa~--p~~---r~~~~--~~~l~~~R------------~~   82 (165)
                      +-+++.||+  |.+..|.+|+-.      + .   +||||-+-  +..   +....  .-.++.+.            -.
T Consensus        35 ~~~~~~Igdg~GFmS~I~lV~~dW~~~~~~~~LP~k~vlKI~S~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~l~~~HN  114 (414)
T PF07914_consen   35 NKKATNIGDGKGFMSRIALVEPDWTGEEEDENLPKKFVLKIPSQLALRALSENMKFEGGKGFDEEKEWEEFEKFLREMHN  114 (414)
T ss_pred             CcceeeccCCcchheeEEEEEeeeccCccccCCCceEEEEeccHhhHHHHHHhhccccccccchhhHHHHHHHHHHHhhH
Confidence            456777775  778999999842      1 1   89999885  222   22110  11122222            12


Q ss_pred             HHHHHHHHhhccC--CCCCceEEE---EcCCC---ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 048614           83 FEALALKEHGQLC--PDHVPEVYH---FDRTM---SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus        83 ~E~~~L~~~~~~~--p~~vP~v~~---~D~~~---~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd  154 (165)
                      .|..+++.+.+.-  +-.+|++|+   ||.++   ..++|||++ +.... . +..| .-+.-..+|.+.||++|..+-.
T Consensus       115 rEv~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ve-n~~~~-~-~~e~-~~~eql~~iv~aLA~~~A~sl~  190 (414)
T PF07914_consen  115 REVNFYKIFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVE-NVHSM-D-MYEN-LSVEQLLQIVRALAKFHALSLK  190 (414)
T ss_pred             HHHHHHHHHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccC-Cceee-c-ccCC-CCHHHHHHHHHHHHHHHHhHcc
Confidence            4555677777763  457999999   77776   899999999 44322 2 2122 3356678889999999988743

In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=93.73  E-value=0.59  Score=36.79  Aligned_cols=107  Identities=16%  Similarity=-0.001  Sum_probs=69.3

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      +..+|.|....||++.+. .+ .+++|......-..    .-..++...|.+.|+.+..  |..++-. .+.+.+...+|
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv   78 (258)
T cd05578           5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE----KGSVRNVLNERRILQELNH--PFLVNLWYSFQDEENMYLV   78 (258)
T ss_pred             EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc----hhHHHHHHHHHHHHHhCCC--CChHHHHHhhcCCCeEEEE
Confidence            567899999999999986 34 78888775321100    0124577777777776643  4433322 23356778899


Q ss_pred             EecCCCCchHHHHHHHcC-CCCH----HHHHHHHHHHHHHHhc
Q 048614          114 MRYLEPPHIILRKGLIAG-IKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g-~~~~----~~a~~iG~~La~~h~~  151 (165)
                      ||++.  +..|+..+... ...+    .++.+|...|+-+|..
T Consensus        79 ~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~  119 (258)
T cd05578          79 VDLLL--GGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK  119 (258)
T ss_pred             EeCCC--CCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence            99997  45777777654 2222    4567788888888864

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=93.70  E-value=1.6  Score=34.92  Aligned_cols=106  Identities=18%  Similarity=0.076  Sum_probs=66.1

Q ss_pred             eeEecCCCceeEEEEEEe-----CCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 048614           36 TIKEVGDGNLNFVYIVVG-----SSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~-----~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      .++.+|.|....||++..     ..+ .+++|.-.....      .....+...|.++|+.+..  | .+++++.+  +.
T Consensus         8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~   78 (283)
T cd05080           8 KIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG------QQNTSGWKKEINILKTLYH--E-NIVKYKGCCSEQ   78 (283)
T ss_pred             eceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC------hHHHHHHHHHHHHHHhCCC--C-CEeeEEEEEecC
Confidence            567789898888987642     133 688887542211      1223456668778876632  3 44455543  22


Q ss_pred             --CCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          108 --TMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 --~~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                        ....++||+++  ...|.+.+..+...    -.++.++...|..+|...
T Consensus        79 ~~~~~~lv~e~~~--~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~  127 (283)
T cd05080          79 GGKGLQLIMEYVP--LGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQH  127 (283)
T ss_pred             CCceEEEEecCCC--CCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              23569999997  45777776655433    246778888888888654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>PRK10345 hypothetical protein; Provisional

Probab=93.69  E-value=1.8  Score=34.73  Aligned_cols=108  Identities=13%  Similarity=-0.027  Sum_probs=69.1

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhcc--CCCCCceEEEEcCCCc---
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQL--CPDHVPEVYHFDRTMS---  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~--~p~~vP~v~~~D~~~~---  110 (165)
                      +.+.||.|..-.||+ .-.++..|||...+.-.       -..+..+.|...|+.+..-  .-.++|++|.+-.++.   
T Consensus         6 ~~~~LG~G~~~~Vy~-hp~~~~k~IKv~~~~~~-------~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g   77 (210)
T PRK10345          6 EQSPLGTGRHRKCYA-HPEDAQRCIKIVYHRGD-------GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTG   77 (210)
T ss_pred             CcceecCCCceEEEE-CCCCcCeEEEEEecccc-------chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCe
Confidence            557899999999996 32234567898754211       1346789999999988541  1235888887776662   


Q ss_pred             e---EEEecCCCCchHHHHHHHcCCCCHH---HHHHHHHHHHHHHhc
Q 048614          111 L---IGMRYLEPPHIILRKGLIAGIKYPL---LAEHMSEFMAKTLFY  151 (165)
Q Consensus       111 ~---~vMEdL~~~~~~lr~~l~~g~~~~~---~a~~iG~~La~~h~~  151 (165)
                      .   +||||.+....+|.+.+.++.....   +.+.+-.++..+|..
T Consensus        78 ~v~~~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~  124 (210)
T PRK10345         78 YVYDVIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDN  124 (210)
T ss_pred             EEEEEEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHC
Confidence            2   6899855336799998877653332   334444444566643

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=93.68  E-value=0.92  Score=39.43  Aligned_cols=84  Identities=15%  Similarity=0.020  Sum_probs=53.0

Q ss_pred             eeEecCCCceeEEEEEEeCC------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 048614           36 TIKEVGDGNLNFVYIVVGSS------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      -.+.||.|....||++....      + .+.||.-.+..+.      ...++...|.++|+.+... |. +++++.+  +
T Consensus        41 ~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~------~~~~~~~~Ei~~l~~l~~H-pn-Iv~l~~~~~~  112 (400)
T cd05105          41 LGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS------SEKQALMSELKIMTHLGPH-LN-IVNLLGACTK  112 (400)
T ss_pred             hhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCCh------HHHHHHHHHHHHHHhcCCC-CC-eeeEEEEEcc
Confidence            35778999999999987531      1 4778865433221      1235677788888776532 43 4445443  4


Q ss_pred             CCCceEEEecCCCCchHHHHHHH
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLI  129 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~  129 (165)
                      .....+||||++  ..+|.+.|.
T Consensus       113 ~~~~~lv~Ey~~--~g~L~~~l~  133 (400)
T cd05105         113 SGPIYIITEYCF--YGDLVNYLH  133 (400)
T ss_pred             CCceEEEEEecC--CCcHHHHHH
Confidence            566899999997  335555443

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=93.66  E-value=0.61  Score=37.78  Aligned_cols=109  Identities=17%  Similarity=0.178  Sum_probs=65.8

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~  107 (165)
                      +++ .++.+|.|....||++...+ | .++||+.....      ..-...+...|.+.+..... .|. +++++  +.+.
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~------~~~~~~~~~~e~~~~~~~~~-~~~-i~~~~~~~~~~   86 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG------NKEENKRILMDLDVVLKSHD-CPY-IVKCYGYFITD   86 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC------ChHHHHHHHHHHHHHHhccC-CCc-hHhhheeeecC
Confidence            344 57889999999999999874 5 78888754211      11223344455555544332 233 33333  3367


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCC----CHHHHHHHHHHHHHHHh
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIK----YPLLAEHMSEFMAKTLF  150 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~----~~~~a~~iG~~La~~h~  150 (165)
                      ....++||+++.....++.... +..    .-.++.+|...|+-+|.
T Consensus        87 ~~~~~v~e~~~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~  132 (296)
T cd06618          87 SDVFICMELMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKE  132 (296)
T ss_pred             CeEEEEeeccCcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence            7788999999743334443322 221    12578888999999995

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=93.63  E-value=1  Score=44.24  Aligned_cols=109  Identities=16%  Similarity=0.136  Sum_probs=68.3

Q ss_pred             cc-eeEecCCCceeEEEEEEeCCC--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcC--
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDR--  107 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~--  107 (165)
                      ++ -+..||.|....||++.+...  .+++|.-.... ..    .-...+...|..+|+.+..  |..++-+-. ++.  
T Consensus        14 ~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~-l~----e~~~~~~~~EI~IL~~L~H--PNIVrl~d~f~de~~   86 (1021)
T PTZ00266         14 EYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRG-LK----EREKSQLVIEVNVMRELKH--KNIVRYIDRFLNKAN   86 (1021)
T ss_pred             CEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccc-cC----HHHHHHHHHHHHHHHHcCC--CCcCeEEEEEEecCC
Confidence            44 567899999999999998643  56777543211 10    1123566778888877653  444443322 333  


Q ss_pred             CCceEEEecCCCCchHHHHHHHc-----CCCC----HHHHHHHHHHHHHHHhc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIA-----GIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~-----g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      ....+||||++  ...|.+.|..     +...    -.++.+|...|+-+|..
T Consensus        87 ~~lyIVMEY~~--gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~  137 (1021)
T PTZ00266         87 QKLYILMEFCD--AGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNL  137 (1021)
T ss_pred             CEEEEEEeCCC--CCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            33578999998  3455555543     2222    25778899999999974

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=93.61  E-value=1.1  Score=37.14  Aligned_cols=108  Identities=14%  Similarity=0.009  Sum_probs=62.7

Q ss_pred             eeEecCCCceeEEEEEEeCCC--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      -+..+|.|....||++.....  .+++|.-.......    .........|...|+....  | .++.++  +.+.+...
T Consensus         5 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~--~-~i~~~~~~~~~~~~~~   77 (332)
T cd05623           5 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK----RAETACFREERDVLVNGDN--Q-WITTLHYAFQDENNLY   77 (332)
T ss_pred             EEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHH----hhHHHHHHHHHHHHhhCCC--C-CEeeEEEEEecCCEEE
Confidence            467899999999999987643  67778643211000    0112234445555544322  3 333333  33556678


Q ss_pred             EEEecCCCCchHHHHHHHcC-CCC-H----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAG-IKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g-~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  ...|.+.+.+. ... .    .++.+|...|..+|...
T Consensus        78 lv~ey~~--~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~  122 (332)
T cd05623          78 LVMDYYV--GGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH  122 (332)
T ss_pred             EEEeccC--CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  34777777652 222 2    35567777787777543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=93.59  E-value=0.55  Score=36.63  Aligned_cols=102  Identities=19%  Similarity=0.146  Sum_probs=61.4

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCC-CCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC--C
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESW-PMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT--M  109 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~-~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~--~  109 (165)
                      ...+|.|....||++.+. +| .+++|.-..      ..+ .-..++...|...|+.+..   ..+++++.  .+..  .
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~------~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~~~~~~   75 (265)
T cd08217           5 LETIGKGSFGTVRKVRRKSDGKILVWKEIDY------GNMTEKEKQQLVSEVNILRELKH---PNIVRYYDRIIDRSNQT   75 (265)
T ss_pred             eeeeccCCCeEEEEeeecCCCCEEEEEEEec------ccCCHHHHHHHHHHHHHHHhcCC---CccceeeeeeecCCCCE
Confidence            356888988899999876 34 688885321      111 1112455556666665542   34555554  3332  3


Q ss_pred             ceEEEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHH
Q 048614          110 SLIGMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTL  149 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h  149 (165)
                      ..++|||++  ..+|.+.+..    +...     -.++.+|...|+.+|
T Consensus        76 ~~~~~e~~~--~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH  122 (265)
T cd08217          76 LYIVMEYCE--GGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH  122 (265)
T ss_pred             EEEEehhcc--CCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence            468999997  3355555543    2221     247788999999999

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=93.58  E-value=1.5  Score=34.56  Aligned_cols=106  Identities=14%  Similarity=0.021  Sum_probs=66.1

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      ..+.+|.|....||++.+. ++ .+++|.-.....       -.......|..+++....  |..++-. .+.+.+...+
T Consensus        13 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------~~~~~~~~e~~~~~~l~h--~~ii~~~~~~~~~~~~~l   83 (267)
T cd06645          13 LIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG-------EDFAVVQQEIIMMKDCKH--SNIVAYFGSYLRRDKLWI   83 (267)
T ss_pred             HHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch-------hHHHHHHHHHHHHHhCCC--CCeeeEEEEEEeCCEEEE
Confidence            3456788888899999875 34 788887542211       122445567777766532  3333222 2346677889


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++  ...|.+.+......     -.++.++...|.-+|...
T Consensus        84 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  126 (267)
T cd06645          84 CMEFCG--GGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKG  126 (267)
T ss_pred             EEeccC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  45776666443322     246677788888888653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=93.55  E-value=0.82  Score=37.31  Aligned_cols=107  Identities=13%  Similarity=0.053  Sum_probs=65.0

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPE-VYHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~~~~~~  112 (165)
                      ....+|.|..+.||++... +| .+++|.-.......    .-...+...|.+.|+....  |..+.- -++.+.+...+
T Consensus        19 ~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~----~~~~~~~~~Ei~~l~~l~h--~niv~~~~~~~~~~~~~l   92 (307)
T cd06607          19 DLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS----NEKWQDIIKEVRFLQQLRH--PNTIEYKGCYLREHTAWL   92 (307)
T ss_pred             hheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCc----HHHHHHHHHHHHHHHhCCC--CCEEEEEEEEEeCCeEEE
Confidence            5678999999999999875 34 78888653211110    0112355667777776642  332221 13457788899


Q ss_pred             EEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhc
Q 048614          113 GMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      ||||+..   .+.+.+..  +...    -.++.+|...|+-+|..
T Consensus        93 v~e~~~g---~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~  134 (307)
T cd06607          93 VMEYCLG---SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH  134 (307)
T ss_pred             EHHhhCC---CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999973   22232221  2222    24677889999999965

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=93.50  E-value=1.5  Score=35.04  Aligned_cols=105  Identities=14%  Similarity=0.055  Sum_probs=64.9

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      .++.+|.|....||++.+. .+ .+++|.....        .....+...|..+++.+..  ...+.+++.+-       
T Consensus        20 ~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~--------~~~~~~~~~e~~~l~~~~~--h~~i~~~~~~~~~~~~~~   89 (282)
T cd06636          20 LVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--------EDEEEEIKLEINMLKKYSH--HRNIATYYGAFIKKSPPG   89 (282)
T ss_pred             hheeeccCCCeEEEEEEEcCCCcEEEEEEEecC--------hHHHHHHHHHHHHHHHhcC--CCcEEEEeeehhcccccC
Confidence            4578899999999999875 34 7888864211        1123455667777776643  22334444332       


Q ss_pred             -CCCceEEEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          107 -RTMSLIGMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 -~~~~~~vMEdL~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                       .+...++|||++  ...+...+...  ...     -.++.+|...|+.+|...
T Consensus        90 ~~~~~~iv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~  141 (282)
T cd06636          90 HDDQLWLVMEFCG--AGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK  141 (282)
T ss_pred             CCCEEEEEEEeCC--CCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             344579999997  34555555432  212     135678899999999764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=93.37  E-value=1.2  Score=35.63  Aligned_cols=106  Identities=15%  Similarity=0.057  Sum_probs=65.7

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-eEEEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP-EVYHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~D~~~~~~v  113 (165)
                      ++.+|.|....||++.+. +| .+++|.-.....  ..   ....+...|.+.|+.+..  |..++ .-++.|.....++
T Consensus         5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~--~~---~~~~~~~~ei~~l~~l~h--~~i~~~~~~~~~~~~~~lv   77 (284)
T cd07839           5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DE---GVPSSALREICLLKELKH--KNIVRLYDVLHSDKKLTLV   77 (284)
T ss_pred             EEEecccCCeEEEEEEECCCCcEEEEEEeecccc--cc---cCccchhHHHHHHHhcCC--CCeeeHHHHhccCCceEEE
Confidence            467899999999999876 45 788886542211  11   112345568888877643  32221 1123466778899


Q ss_pred             EecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++ .  .+.+.+..  +...    ..++.+|...|+.+|...
T Consensus        78 ~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~  119 (284)
T cd07839          78 FEYCD-Q--DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN  119 (284)
T ss_pred             EecCC-C--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99997 2  34454443  2222    356778888888888654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=93.36  E-value=0.8  Score=36.76  Aligned_cols=105  Identities=15%  Similarity=0.091  Sum_probs=65.2

Q ss_pred             eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 048614           36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D  106 (165)
                      -..++|.|....||++...      .+ .+.+|+-.....       ........|.+.|+.+..  |. +.+++  ..+
T Consensus         9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~   78 (280)
T cd05092           9 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE-------SARQDFQREAELLTVLQH--QH-IVRFYGVCTE   78 (280)
T ss_pred             eccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH-------HHHHHHHHHHHHHhcCCC--CC-CceEEEEEec
Confidence            4577888988999998632      23 566676332111       123456677777776643  33 33344  345


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC----------------C----CHHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGI----------------K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~----------------~----~~~~a~~iG~~La~~h~~t  152 (165)
                      .....++||+++  ...|.+.+....                .    .-.++.+|...|+-+|...
T Consensus        79 ~~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~  142 (280)
T cd05092          79 GRPLLMVFEYMR--HGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH  142 (280)
T ss_pred             CCceEEEEecCC--CCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            577889999997  346766665432                1    1246678888888888654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=93.31  E-value=1.2  Score=41.51  Aligned_cols=109  Identities=14%  Similarity=-0.040  Sum_probs=68.0

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~~~~~~  112 (165)
                      -++.||.|....||++.+. .+ .++||.-...--.    -.-...+...|...|+.+..  |..++-.. +.+.....+
T Consensus         8 i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~----~~~~~~~~~~E~~~l~~l~h--p~Iv~~~~~~~~~~~~~l   81 (669)
T cd05610           8 IVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI----NKNMVHQVQAERDALALSKS--PFIVHLYYSLQSANNVYL   81 (669)
T ss_pred             EEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc----CHHHHHHHHHHHHHHHhcCC--CCcCeEEEEEEECCEEEE
Confidence            4678999999999999987 34 7889975321100    01123566667777765532  33333222 234567889


Q ss_pred             EEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||+.  ...|++.+..... .    -.++.+|...|.-+|...
T Consensus        82 VmEy~~--g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~g  124 (669)
T cd05610          82 VMEYLI--GGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHG  124 (669)
T ss_pred             EEeCCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997  3467666654322 1    256778888888888753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=93.30  E-value=1.6  Score=34.62  Aligned_cols=106  Identities=20%  Similarity=0.173  Sum_probs=65.5

Q ss_pred             eeEecCCCceeEEEEEEeCC-------CeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-------GSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-------gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D  106 (165)
                      -...+|.|....||++...+       ..+++|.-.....      .........|...|+.+..  | .+.+++.  .+
T Consensus        10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~------~~~~~~~~~e~~~l~~~~~--~-~i~~~~~~~~~   80 (277)
T cd05032          10 LIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS------MRERIEFLNEASVMKEFNC--H-HVVRLLGVVST   80 (277)
T ss_pred             EEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC------HHHHHHHHHHHHHHHhCCC--C-ceeEEEEEEcC
Confidence            45778989999999988642       2688888432111      1112344556666665432  3 3344543  46


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCC---------------CHHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIK---------------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~---------------~~~~a~~iG~~La~~h~~t  152 (165)
                      .....++||+++  ..+|.+.+.....               .-.++.+|...|.-+|...
T Consensus        81 ~~~~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  139 (277)
T cd05032          81 GQPTLVVMELMA--KGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK  139 (277)
T ss_pred             CCCcEEEEecCC--CCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            677899999997  3477776653211               1136678888888888643

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=93.21  E-value=1.2  Score=35.41  Aligned_cols=104  Identities=15%  Similarity=0.083  Sum_probs=65.9

Q ss_pred             eEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcC
Q 048614           37 IKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~  107 (165)
                      .+.+|.|....||++...      .+ .++||.-....      ..-...+...|+++|+.+..  |. +.++  ++.+.
T Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~   80 (280)
T cd05049          10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA------SNDARKDFEREAELLTNFQH--EN-IVKFYGVCTEG   80 (280)
T ss_pred             HhhccccCCceEeeeeeccccCcCCcceEEEEeecccC------CHHHHHHHHHHHHHHHhcCC--CC-chheeeEEecC
Confidence            466888888899998753      22 68888653211      11123567778888877643  33 3333  33455


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCC-------------------CHHHHHHHHHHHHHHHhc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIK-------------------YPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~-------------------~~~~a~~iG~~La~~h~~  151 (165)
                      ....++||+++  ...|++.+.....                   .-.++.+|...|+.+|..
T Consensus        81 ~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~  141 (280)
T cd05049          81 DPPIMVFEYME--HGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ  141 (280)
T ss_pred             CCeEEEEecCC--CCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC
Confidence            77899999997  3577777754211                   123577888888888864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=93.20  E-value=1.8  Score=33.65  Aligned_cols=102  Identities=17%  Similarity=0.087  Sum_probs=66.7

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~v  113 (165)
                      .+.++.|....||++.... + .+++|.-....         ..++...|.+.++.+..  |..++-. ++.+.....++
T Consensus         8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---------~~~~~~~e~~~~~~l~~--~~i~~~~~~~~~~~~~~l~   76 (256)
T cd06612           8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE---------DLQEIIKEISILKQCDS--PYIVKYYGSYFKNTDLWIV   76 (256)
T ss_pred             hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH---------HHHHHHHHHHHHHhCCC--CcEeeeeeeeecCCcEEEE
Confidence            4457788888899998764 4 78888643211         15677788888877722  3333222 34566778899


Q ss_pred             EecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhc
Q 048614          114 MRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ||+++  ...|++.+.. +...     -.++.++...|+.+|..
T Consensus        77 ~e~~~--~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~  118 (256)
T cd06612          77 MEYCG--AGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN  118 (256)
T ss_pred             EecCC--CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99998  4577776653 3222     25777888888888854

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=93.15  E-value=1.3  Score=35.03  Aligned_cols=112  Identities=15%  Similarity=0.102  Sum_probs=66.6

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCcccccc-C--CCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCI-G--ESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~-~--~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~  108 (165)
                      ..+.+|.|...-||++.+. +| .++||.-..-.... .  ..+.--.+....|...|+.+..  | .+++++.+  +.+
T Consensus         5 ~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~   81 (272)
T cd06629           5 KGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH--L-NIVQYLGFETTEE   81 (272)
T ss_pred             ecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCC--C-CcceEEEEeccCC
Confidence            3467899999999999764 45 78888654221110 0  0011112345557667766642  3 34445433  446


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++  ...|.+.+.+....     -.++.+|...|..+|...
T Consensus        82 ~~~lv~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  128 (272)
T cd06629          82 YLSIFLEYVP--GGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKG  128 (272)
T ss_pred             ceEEEEecCC--CCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            6789999997  34666666553322     235678888888888654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=93.13  E-value=2.6  Score=33.92  Aligned_cols=109  Identities=15%  Similarity=0.078  Sum_probs=67.5

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFD  106 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D  106 (165)
                      ++.+ -++.+|.|...-||++.+.. + .+++|.-....       .-...+...|...++....  | .+++++  +.+
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~   80 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS-------EEELEDYMVEIEILATCNH--P-YIVKLLGAFYW   80 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC-------HHHHHHHHHHHHHHHhCCC--C-cEeeeEEEEEe
Confidence            3444 36679999999999998864 4 67777754221       1123455667777766542  3 344444  346


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+||||++.  ..+...+.+.  ...    -.++.+|...|+.+|...
T Consensus        81 ~~~~~lv~e~~~~--~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~  130 (292)
T cd06644          81 DGKLWIMIEFCPG--GAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMK  130 (292)
T ss_pred             CCeEEEEEecCCC--CcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            6778999999983  3454444331  112    246777788888888643

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=93.12  E-value=3  Score=32.93  Aligned_cols=106  Identities=15%  Similarity=0.001  Sum_probs=65.5

Q ss_pred             eeEecCCCceeEEEEEEeCC----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 048614           36 TIKEVGDGNLNFVYIVVGSS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~  108 (165)
                      -.+.+|.|....||++....    . .++||...+...      .....+...|..+|+.+..  | .+.+++.  .+..
T Consensus         8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~   78 (266)
T cd05033           8 IEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS------DKQRLDFLTEASIMGQFDH--P-NIIRLEGVVTKSR   78 (266)
T ss_pred             eeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC------hHHHHHHHHHHHHHHhCCC--C-CcceEeEEEecCC
Confidence            45778999999999987642    2 688887543211      1122344557777766642  3 3444443  3556


Q ss_pred             CceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...++||+++  ..+|.+.+...  ...    -.++.++...|+.+|...
T Consensus        79 ~~~iv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~  126 (266)
T cd05033          79 PVMIITEYME--NGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN  126 (266)
T ss_pred             ceEEEEEcCC--CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6789999997  34677766542  222    245677788888888743

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=92.99  E-value=0.81  Score=36.66  Aligned_cols=103  Identities=18%  Similarity=0.202  Sum_probs=65.4

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~  112 (165)
                      +..+|.|....||++.+. .| .+++|.-.....      .....+...|.+.|+.+..  |. +++++  +.+.....+
T Consensus         6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~e~~~l~~~~~--~~-i~~~~~~~~~~~~~~l   76 (286)
T cd06622           6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD------ESKFNQIIMELDILHKAVS--PY-IVDFYGAFFIEGAVYM   76 (286)
T ss_pred             hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC------HHHHHHHHHHHHHHHhcCC--Cc-HHhhhhheecCCeEEE
Confidence            457889999999999886 44 788886532111      0122456678888876532  22 22222  345677789


Q ss_pred             EEecCCCCchHHHHHHHcC----CC----CHHHHHHHHHHHHHHHh
Q 048614          113 GMRYLEPPHIILRKGLIAG----IK----YPLLAEHMSEFMAKTLF  150 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g----~~----~~~~a~~iG~~La~~h~  150 (165)
                      ||||++  ...|...+..+    ..    .-.++.+|...|..+|.
T Consensus        77 v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~  120 (286)
T cd06622          77 CMEYMD--AGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE  120 (286)
T ss_pred             EEeecC--CCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999998  34666666553    21    13567788888888884

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=92.94  E-value=1.5  Score=34.94  Aligned_cols=106  Identities=20%  Similarity=0.172  Sum_probs=63.4

Q ss_pred             eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 048614           36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      -...+|.|....||++...      .+ .++||.-..-     ..+ -...+...|...|+.+.  .|. +.+++.+  +
T Consensus        10 ~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~-----~~~-~~~~~~~~e~~~l~~l~--~~~-iv~~~~~~~~   80 (277)
T cd05062          10 MSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA-----ASM-RERIEFLNEASVMKEFN--CHH-VVRLLGVVSQ   80 (277)
T ss_pred             eeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc-----CCH-HHHHHHHHHHHHHHhCC--CCC-eeeEEEEEcC
Confidence            3577899999999987643      22 5888763211     111 11223455666666543  243 4444543  4


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCC---------------CHHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIK---------------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~---------------~~~~a~~iG~~La~~h~~t  152 (165)
                      .....+||||++  ..+|.+.+.+...               .-.++.++...|+.+|...
T Consensus        81 ~~~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  139 (277)
T cd05062          81 GQPTLVIMELMT--RGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK  139 (277)
T ss_pred             CCCeEEEEecCC--CCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456788999998  3466666654211               1246778899999999754

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=92.94  E-value=1.6  Score=37.84  Aligned_cols=104  Identities=17%  Similarity=0.033  Sum_probs=70.7

Q ss_pred             EecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC--ceEEE
Q 048614           38 KEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTM--SLIGM  114 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~--~~~vM  114 (165)
                      ..+|.|-...|||....+| .|.||.-.+..      ... ......|.+.|..++ . |..|+=+=++.+..  .++|.
T Consensus        81 ~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~------~~~-~~eF~~Ei~~ls~l~-H-~Nlv~LlGyC~e~~~~~~LVY  151 (361)
T KOG1187|consen   81 NLIGEGGFGTVYKGVLSDGTVVAVKRLSSNS------GQG-EREFLNEVEILSRLR-H-PNLVKLLGYCLEGGEHRLLVY  151 (361)
T ss_pred             cceecCCCeEEEEEEECCCCEEEEEEecCCC------Ccc-hhHHHHHHHHHhcCC-C-cCcccEEEEEecCCceEEEEE
Confidence            4677777889999999987 89999332221      111 223777777776665 2 55555433344333  69999


Q ss_pred             ecCCCCchHHHHHHHcCCC-------CHHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGIK-------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~-------~~~~a~~iG~~La~~h~~t  152 (165)
                      ||.+ ++ +|.+.|.....       .-.+|..++..|+-+|...
T Consensus       152 Eym~-nG-sL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~  194 (361)
T KOG1187|consen  152 EYMP-NG-SLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGC  194 (361)
T ss_pred             EccC-CC-CHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCC
Confidence            9999 44 78777665442       3479999999999999866

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=92.94  E-value=1.7  Score=35.64  Aligned_cols=107  Identities=14%  Similarity=-0.008  Sum_probs=68.7

Q ss_pred             eeEecCCCceeEEEEEEeC--------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--
Q 048614           36 TIKEVGDGNLNFVYIVVGS--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--  104 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--  104 (165)
                      -...+|.|....||++...        .+ .+.+|.......      .-...+...|.+.|+..... | .+.+++.  
T Consensus        16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~-~iv~~~~~~   87 (314)
T cd05099          16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT------DKDLADLISEMELMKLIGKH-K-NIINLLGVC   87 (314)
T ss_pred             eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC------hHHHHHHHHHHHHHHhccCC-C-CeeeEEEEE
Confidence            5678999999999999742        12 577887553221      11234666777777766432 3 3444553  


Q ss_pred             EcCCCceEEEecCCCCchHHHHHHHcCC----------------CC-----HHHHHHHHHHHHHHHhcc
Q 048614          105 FDRTMSLIGMRYLEPPHIILRKGLIAGI----------------KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~D~~~~~~vMEdL~~~~~~lr~~l~~g~----------------~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+.....++|||++  ...|.+.+....                ..     -.++.+|...|..+|...
T Consensus        88 ~~~~~~~lv~e~~~--~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g  154 (314)
T cd05099          88 TQEGPLYVIVEYAA--KGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR  154 (314)
T ss_pred             ccCCceEEEEecCC--CCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            35566789999997  347777775532                11     135778999999999754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=92.89  E-value=0.9  Score=38.01  Aligned_cols=85  Identities=13%  Similarity=0.033  Sum_probs=51.6

Q ss_pred             eeEecCCCceeEEEEEEe------CCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-E-c
Q 048614           36 TIKEVGDGNLNFVYIVVG------SSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-F-D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~------~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~-D  106 (165)
                      -.+.||.|....||++..      ..+ .+.||+-.....      .-...+...|.++|+.+... |. +.+++. + +
T Consensus        11 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~n-iv~~~~~~~~   82 (343)
T cd05103          11 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT------HSEHRALMSELKILIHIGHH-LN-VVNLLGACTK   82 (343)
T ss_pred             ccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC------hHHHHHHHHHHHHHHhccCC-cc-Hhhhcceeec
Confidence            467799999999999963      234 688887642211      01124566788888776432 33 333332 3 2


Q ss_pred             C-CCceEEEecCCCCchHHHHHHHc
Q 048614          107 R-TMSLIGMRYLEPPHIILRKGLIA  130 (165)
Q Consensus       107 ~-~~~~~vMEdL~~~~~~lr~~l~~  130 (165)
                      + ....++|||++  ..+|.+.+..
T Consensus        83 ~~~~~~lv~ey~~--~g~L~~~i~~  105 (343)
T cd05103          83 PGGPLMVIVEFCK--FGNLSNYLRS  105 (343)
T ss_pred             CCCceEEEEeccC--CCcHHHHHHh
Confidence            2 34578999998  3466665543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=92.89  E-value=1  Score=36.37  Aligned_cols=105  Identities=16%  Similarity=0.110  Sum_probs=66.1

Q ss_pred             eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 048614           36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D  106 (165)
                      -...+|.|...-||++...      ++ .+++|.-.-..       .-...+...|.++|+.+..  |. +++++  +.+
T Consensus         9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~   78 (288)
T cd05093           9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-------DNARKDFHREAELLTNLQH--EH-IVKFYGVCVE   78 (288)
T ss_pred             eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-------HHHHHHHHHHHHHHHhCCC--CC-cceEEEEEec
Confidence            4567899999999999752      22 46667553111       1123456678888876642  43 33443  346


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC--------------CC----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGI--------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~--------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....++|||.+  ...|.+.+....              ..    -.++.+|...|+.+|...
T Consensus        79 ~~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~  140 (288)
T cd05093          79 GDPLIMVFEYMK--HGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH  140 (288)
T ss_pred             CCccEEEEEcCC--CCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            678899999997  447766665321              11    246778888898888765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=92.88  E-value=1.8  Score=34.78  Aligned_cols=109  Identities=13%  Similarity=-0.072  Sum_probs=59.6

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccC-CCCCceEE-EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLC-PDHVPEVY-HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~-p~~vP~v~-~~D~~~~~  111 (165)
                      .++.+|.|....||++... +| .+.+|.+.-.+... . -.-...+...|...++   .+- |. +.+++ .+......
T Consensus        11 ~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~-~~~~~~~~~~~~~~l~---~l~h~~-iv~~~~~~~~~~~~   84 (279)
T cd05111          11 KLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-S-GRQTFQEITDHMLAMG---SLDHAY-IVRLLGICPGASLQ   84 (279)
T ss_pred             eccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-c-chHHHHHHHHHHHHHh---cCCCCC-cceEEEEECCCccE
Confidence            4567899999999999864 23 33333332222110 0 0011122222222332   332 43 33444 33445567


Q ss_pred             EEEecCCCCchHHHHHHHcC-CC-C----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAG-IK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g-~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++  ..+|.+.+... .. .    -.++.+|...|+-+|...
T Consensus        85 ~i~e~~~--~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  129 (279)
T cd05111          85 LVTQLSP--LGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR  129 (279)
T ss_pred             EEEEeCC--CCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8999998  34777777542 21 1    257889999999999754

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=92.83  E-value=2.5  Score=33.95  Aligned_cols=106  Identities=16%  Similarity=0.089  Sum_probs=64.1

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EE--------
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HF--------  105 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~--------  105 (165)
                      ...+|.|....||++... +| .++||........     .-.......|.++++.+..  |..++-.- ..        
T Consensus        12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-----~~~~~~~~~e~~~~~~l~h--~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864          12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK-----EGFPITAIREIKILRQLNH--RNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             eeeecccCCEEEEEEEECCCCcEEEEEEEeecccc-----cCchHHHHHHHHHHHhCCC--CCeeeeeheecCcchhhhc
Confidence            467888999999999986 34 7888975433211     1122345567778877642  43333111 11        


Q ss_pred             --cCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          106 --DRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 --D~~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                        +.....++|||++ .  .+...+....  ..    -.++.+|...|+.+|...
T Consensus        85 ~~~~~~~~lv~e~~~-~--~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  136 (302)
T cd07864          85 KKDKGAFYLVFEYMD-H--DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN  136 (302)
T ss_pred             cccCCcEEEEEcccC-c--cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              2235789999997 2  3444454432  11    256778888899888553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=92.80  E-value=1.2  Score=35.13  Aligned_cols=108  Identities=13%  Similarity=0.101  Sum_probs=64.8

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-eEEEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP-EVYHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~D~~~~~~v  113 (165)
                      .+.+|.|....||++... +| .++||.-...-.. .   .-...+...|...|+....  |..++ .-++.+.....++
T Consensus         7 ~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~-~---~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~v   80 (267)
T cd08229           7 EKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLM-D---AKARADCIKEIDLLKQLNH--PNVIKYYASFIEDNELNIV   80 (267)
T ss_pred             hhhhcccCCeEEEEEeecCCCceEEEEeeeehhhh-h---HHHHHHHHHHHHHHHHccC--CchhhhhheeEeCCeEEEE
Confidence            356788888899999864 45 8889954421100 0   0112355567777776642  33222 1234466778899


Q ss_pred             EecCCCCchHHHHHHHc----CCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIA----GIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~----g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|++.+..    +...+     .++.+|...|+.+|...
T Consensus        81 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  126 (267)
T cd08229          81 LELAD--AGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR  126 (267)
T ss_pred             EEecC--CCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99997  3456655532    22222     45778899999999654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=92.76  E-value=2  Score=35.89  Aligned_cols=104  Identities=16%  Similarity=0.179  Sum_probs=65.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--------
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--------  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--------  105 (165)
                      .++++|.|....||++.+. .| .+++|.-...-    .   -.......|.++|+.+..  |. +.+++.+        
T Consensus         9 ~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~----~---~~~~~~~~Ei~~l~~l~h--~~-i~~~~~~~~~~~~~~   78 (342)
T cd07854           9 DLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD----P---QSVKHALREIKIIRRLDH--DN-IVKVYEVLGPSGSDL   78 (342)
T ss_pred             EEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC----C---chHHHHHHHHHHHHhcCC--Cc-chhhHhhhccccccc
Confidence            5788999999999999875 34 78888653111    1   122445567788876643  32 2322211        


Q ss_pred             --------cCCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          106 --------DRTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 --------D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                              +.....++||+++ .  .+++.+..+....    .++.+|...|.-+|...
T Consensus        79 ~~~~~~~~~~~~~~lv~e~~~-~--~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g  134 (342)
T cd07854          79 TEDVGSLTELNSVYIVQEYME-T--DLANVLEQGPLSEEHARLFMYQLLRGLKYIHSAN  134 (342)
T ss_pred             ccccccccccceEEEEeeccc-c--cHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                    1124569999997 2  5777666655332    45678888888888654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=92.58  E-value=1.6  Score=38.85  Aligned_cols=103  Identities=17%  Similarity=0.084  Sum_probs=66.9

Q ss_pred             EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 048614           38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~v  113 (165)
                      ++||.|-.-.||+..-. ++ .|.||--.-.-    - -+-.++=...|..+|+.+.   -.++-.++.+  +++...+|
T Consensus        16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~----l-~~k~~e~L~~Ei~iLkel~---H~nIV~l~d~~~~~~~i~lV   87 (429)
T KOG0595|consen   16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKKK----L-NKKLVELLLSEIKILKELK---HPNIVRLLDCIEDDDFIYLV   87 (429)
T ss_pred             hhccCcceEEEEEeEeccCCceEEeeeehhhc----c-CHHHHHHHHHHHHHHHhcC---CcceeeEEEEEecCCeEEEE
Confidence            44999999999999876 34 78887644210    0 1112233467777888776   3344444443  56788899


Q ss_pred             EecCCCCchHHHHHHHcC-CCCH----HHHHHHHHHHHHHHh
Q 048614          114 MRYLEPPHIILRKGLIAG-IKYP----LLAEHMSEFMAKTLF  150 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g-~~~~----~~a~~iG~~La~~h~  150 (165)
                      ||||.  +.+|-..+.+. ...+    .+..||+..|.-+|.
T Consensus        88 MEyC~--gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~  127 (429)
T KOG0595|consen   88 MEYCN--GGDLSDYIRRRGRLPEATARHFMQQLASALQFLHE  127 (429)
T ss_pred             EEeCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99998  45777777765 3333    456677777777764

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=92.55  E-value=0.53  Score=43.22  Aligned_cols=126  Identities=16%  Similarity=0.115  Sum_probs=85.6

Q ss_pred             cceeEecCCCceeEEEEEEeCCC-eEEEeecCcccccc------------------CCCCC----CC--hHHHHHHHHHH
Q 048614           34 ALTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCI------------------GESWP----MT--KERAYFEALAL   88 (165)
Q Consensus        34 ~~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~------------------~~~~~----l~--~~R~~~E~~~L   88 (165)
                      ..+=++++--.+--|+|..+.+| .|+||-=.|-++..                  -|+..    .+  .++...|-.++
T Consensus       163 ~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~  242 (538)
T KOG1235|consen  163 EFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFT  242 (538)
T ss_pred             hcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchH
Confidence            44556777777788999999989 89999999987641                  12211    11  11222232233


Q ss_pred             HHh----------hccC---CCCCceEEEEcCCCceEEEecCCC-CchHHHHHHHcCCCCH-HHHHHHHHHHHHHHhccc
Q 048614           89 KEH----------GQLC---PDHVPEVYHFDRTMSLIGMRYLEP-PHIILRKGLIAGIKYP-LLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus        89 ~~~----------~~~~---p~~vP~v~~~D~~~~~~vMEdL~~-~~~~lr~~l~~g~~~~-~~a~~iG~~La~~h~~ts  153 (165)
                      +++          ....   +..||+||-.--...+++|||+.+ .-.++ +.|.+..+.| +++..++++.+..-|.+.
T Consensus       243 ~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl-~~i~~~gi~~~~i~~~l~~~~~~qIf~~G  321 (538)
T KOG1235|consen  243 KEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDL-DAIDKRGISPHDILNKLVEAYLEQIFKTG  321 (538)
T ss_pred             HHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCH-HHHHHcCCCHHHHHHHHHHHHHHHHHhcC
Confidence            332          2222   457999998888899999999985 22233 5555555554 899999999999999999


Q ss_pred             ccccCch
Q 048614          154 LLYRTTT  160 (165)
Q Consensus       154 d~~l~~~  160 (165)
                      -|+-++.
T Consensus       322 ffHaDPH  328 (538)
T KOG1235|consen  322 FFHADPH  328 (538)
T ss_pred             CccCCCC
Confidence            8887763

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=92.42  E-value=2.1  Score=34.44  Aligned_cols=104  Identities=19%  Similarity=0.105  Sum_probs=64.4

Q ss_pred             EecCCCceeEEEEEEeCC-----C--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 048614           38 KEVGDGNLNFVYIVVGSS-----G--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT  108 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~-----g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~  108 (165)
                      +.+|.|....||++.+..     +  .+.+|.-....-.      -...+...|...|+.+..  |.. .+++.  .+.+
T Consensus         6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~------~~~~~~~~E~~~l~~l~h--~~i-v~~~~~~~~~~   76 (290)
T cd05045           6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASS------SELRDLLSEFNLLKQVNH--PHV-IKLYGACSQDG   76 (290)
T ss_pred             ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCH------HHHHHHHHHHHHHhhCCC--CCE-eeEEEEEecCC
Confidence            567888888899987641     1  4666655422110      112466678777776642  433 33433  3557


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCC-----------------------------CHHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIK-----------------------------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~-----------------------------~~~~a~~iG~~La~~h~~t  152 (165)
                      ...++|||++  ...|++.+.....                             .-.++.++...|.-+|...
T Consensus        77 ~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~  147 (290)
T cd05045          77 PLLLIVEYAK--YGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK  147 (290)
T ss_pred             CcEEEEEecC--CCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7889999997  4577777654321                             0256778888888888654

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=92.42  E-value=2  Score=34.43  Aligned_cols=107  Identities=14%  Similarity=0.148  Sum_probs=62.5

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      ....+|.|....||++.+.. | .+.+|+-.....      .-...+...|...|...... | .+++++  .+++....
T Consensus         8 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~e~~~l~~~~~~-~-~iv~~~~~~~~~~~~~   79 (288)
T cd06616           8 DLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD------EKEQKRLLMDLDVVMRSSDC-P-YIVKFYGALFREGDCW   79 (288)
T ss_pred             HHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC------hHHHHHHHHHHHHHHHhcCC-C-CEeeeeeEEecCCcEE
Confidence            34578899999999998763 4 788897442111      11233455566566554321 3 344444  45677888


Q ss_pred             EEEecCCCCchHHHHHHHc---CCCC----HHHHHHHHHHHHHHHh
Q 048614          112 IGMRYLEPPHIILRKGLIA---GIKY----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~---g~~~----~~~a~~iG~~La~~h~  150 (165)
                      ++||+++.....+...+..   +...    ..++.++...|+-+|.
T Consensus        80 ~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~  125 (288)
T cd06616          80 ICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE  125 (288)
T ss_pred             EEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            9999987433344333221   2222    2466677777777774

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=92.42  E-value=1.3  Score=36.96  Aligned_cols=107  Identities=13%  Similarity=0.075  Sum_probs=66.7

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC----
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRT----  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~----  108 (165)
                      .+..+|.|....||++.+.. + .++||.-..-..     -.-...+...|..+|+.+..  |..++-. ++.+.+    
T Consensus        19 ~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~~   91 (343)
T cd07851          19 NLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ-----SAIHAKRTYRELRLLKHMDH--ENVIGLLDVFTPASSLED   91 (343)
T ss_pred             EEEEeccCCceEEEEEEECCCCcEEEEEecccccc-----hhhHHHHHHHHHHHHHhccC--CCHHHHHHHhhccccccc
Confidence            57889999999999998863 4 788886432110     01223556678888776632  3333221 112222    


Q ss_pred             --CceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          109 --MSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 --~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                        ...+|||+++.   .|.+.+..+...    -.++.+|...|+.+|...
T Consensus        92 ~~~~~lv~e~~~~---~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~g  138 (343)
T cd07851          92 FQDVYLVTHLMGA---DLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAG  138 (343)
T ss_pred             cccEEEEEecCCC---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              26899999972   566666554432    246778888888888754

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=92.39  E-value=3.5  Score=33.41  Aligned_cols=101  Identities=17%  Similarity=0.077  Sum_probs=61.3

Q ss_pred             EecCCCceeEEEEEEeCC---C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---cCCCc
Q 048614           38 KEVGDGNLNFVYIVVGSS---G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF---DRTMS  110 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~---g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---D~~~~  110 (165)
                      ..+|.|....||++...+   + .+++|+-..      ..+   ..+...|.++|+.+..  |..++-.-.+   +....
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~------~~~---~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~   75 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEG------TGI---SMSACREIALLRELKH--PNVIALQKVFLSHSDRKV   75 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecC------CCC---cHHHHHHHHHHHhCCC--CCeeeEEEEEeccCCCeE
Confidence            568999999999998642   2 688886532      111   1356678888877643  4433322222   33456


Q ss_pred             eEEEecCCCCchHHHHHHHcC----------CC----CHHHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLIAG----------IK----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g----------~~----~~~~a~~iG~~La~~h~~t  152 (165)
                      .++|||++.   .+.+.+...          ..    .-.++.+|...|.-+|...
T Consensus        76 ~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~  128 (317)
T cd07867          76 WLLFDYAEH---DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW  128 (317)
T ss_pred             EEEEeeeCC---cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            799999973   333333211          01    1246778889999998753

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=92.39  E-value=2.3  Score=35.64  Aligned_cols=111  Identities=21%  Similarity=0.204  Sum_probs=75.2

Q ss_pred             cc-eeEecCCCceeEEEEEEeCCC---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhcc-CCCCCceEEEEc--
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGSSG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQL-CPDHVPEVYHFD--  106 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~-~p~~vP~v~~~D--  106 (165)
                      .+ -...+|.|-...||.|.+.+.   .+++|--......      .+ .+...|..+|..+... -+..+|.++..-  
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~------~~-~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~   91 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGS------KP-SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRS   91 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccC------CC-ccchhHHHHHHHHhhhcCCCCCCEEEEeccC
Confidence            45 678899999999999998753   3555544433221      12 2778899999998862 245889998776  


Q ss_pred             -CCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 048614          107 -RTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       107 -~~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                       ..-+.+||+-++++...+|...-.++.-.    .+|.++...|-.+|..
T Consensus        92 ~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~  141 (322)
T KOG1164|consen   92 TEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK  141 (322)
T ss_pred             CCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc
Confidence             34579999999976666665444233222    4666777777767753

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=92.30  E-value=0.59  Score=36.80  Aligned_cols=109  Identities=19%  Similarity=0.077  Sum_probs=62.0

Q ss_pred             EecCCCceeEEEEEEeCCC--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-eEEEEcCCCceEEE
Q 048614           38 KEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP-EVYHFDRTMSLIGM  114 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~D~~~~~~vM  114 (165)
                      +.+|.|....||++.+...  ...+|........  ..-+-...+...|+.+++.+..  |..++ .-+..+.+...++|
T Consensus         6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~   81 (260)
T cd08222           6 QRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVG--ELNPNETVQANQEAQLLSKLDH--PAIVKFHASFLERDAFCIIT   81 (260)
T ss_pred             eeecCCCCceEEEEEecCCCCcceEEEecccccc--ccCcchHHHHHHHHHHHHhCCC--CcHHHHHHHHhcCCceEEEE
Confidence            6789999999999987632  3444443322210  1011223455667777766542  33221 12345677788999


Q ss_pred             ecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++.  ..|...+..    +...     -.++.++...|..+|...
T Consensus        82 e~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  126 (260)
T cd08222          82 EYCEG--RDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR  126 (260)
T ss_pred             EeCCC--CCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence            99983  345444321    2222     245677888888888653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=92.29  E-value=0.71  Score=44.15  Aligned_cols=99  Identities=12%  Similarity=0.037  Sum_probs=64.1

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~  112 (165)
                      ...+|.|....||++... +| .++||.......           ....|.+.|+.+   --..+.+++.+  +.+...+
T Consensus       695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~l~~l---~HpnIv~~~~~~~~~~~~~l  760 (968)
T PLN00113        695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-----------IPSSEIADMGKL---QHPNIVKLIGLCRSEKGAYL  760 (968)
T ss_pred             ccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-----------ccHHHHHHHhhC---CCCCcceEEEEEEcCCCCEE
Confidence            346899999999999874 45 899996432110           112344455443   33345556654  5667789


Q ss_pred             EEecCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHhc
Q 048614          113 GMRYLEPPHIILRKGLIAG--IKYPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g--~~~~~~a~~iG~~La~~h~~  151 (165)
                      ||||++  ...|.+.+..-  ...-.++.+|+..|+-+|..
T Consensus       761 v~Ey~~--~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~  799 (968)
T PLN00113        761 IHEYIE--GKNLSEVLRNLSWERRRKIAIGIAKALRFLHCR  799 (968)
T ss_pred             EEeCCC--CCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccC
Confidence            999997  45777766431  11236888999999999954

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=92.29  E-value=1.9  Score=34.50  Aligned_cols=98  Identities=15%  Similarity=0.093  Sum_probs=60.8

Q ss_pred             ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~vM  114 (165)
                      .+|.|....||.+... ++ .+++|.-.+..      +      ...|....+.... .| .+++++.  .+.+...+||
T Consensus        23 ~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~------~------~~~e~~~~~~~~~-h~-~iv~~~~~~~~~~~~~iv~   88 (267)
T PHA03390         23 KLIDGKFGKVSVLKHKPTQKLFVQKIIKAKN------F------NAIEPMVHQLMKD-NP-NFIKLYYSVTTLKGHVLIM   88 (267)
T ss_pred             eecCCCceEEEEEEEcCCCcEEEEEEEehhh------c------chhhHHHHHHhhc-CC-CEEEEEEEEecCCeeEEEE
Confidence            4799999999999875 34 67767643211      0      0113333322222 13 3444443  3667899999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++  ..+|.+.+..+...     -.++.+|...|+.+|..+
T Consensus        89 e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  129 (267)
T PHA03390         89 DYIK--DGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHN  129 (267)
T ss_pred             EcCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9997  35787777665332     247778888888888765

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=92.26  E-value=2.2  Score=34.82  Aligned_cols=105  Identities=16%  Similarity=0.162  Sum_probs=66.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      ....+|.|....||++.+. ++ .+++|.-..  +.     ....++...|...|+.+..  |. +++++  +.+.+...
T Consensus        25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~--~~-----~~~~~~~~~e~~~l~~l~h--p~-i~~~~~~~~~~~~~~   94 (297)
T cd06659          25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDL--RK-----QQRRELLFNEVVIMRDYQH--QN-VVEMYKSYLVGEELW   94 (297)
T ss_pred             hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEe--cc-----cchHHHHHHHHHHHHhCCC--Cc-hhhhhhheeeCCeEE
Confidence            3446899999999999875 34 799996421  11     1123455566666655432  33 33333  44667889


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++ + ..+...+..+...    ..++.++...|+.+|...
T Consensus        95 iv~e~~~-~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~  137 (297)
T cd06659          95 VLMEFLQ-G-GALTDIVSQTRLNEEQIATVCESVLQALCYLHSQG  137 (297)
T ss_pred             EEEecCC-C-CCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998 3 4566655443322    246788888888888664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=92.25  E-value=2.1  Score=34.82  Aligned_cols=97  Identities=6%  Similarity=-0.100  Sum_probs=60.6

Q ss_pred             EEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEecCCCCchHHH
Q 048614           47 FVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLIGMRYLEPPHIILR  125 (165)
Q Consensus        47 ~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~vMEdL~~~~~~lr  125 (165)
                      +|++....+..++||.-.....     ..-..++...|.+.|+.+..  |..++-+ ++.+.+...++|||++  +..++
T Consensus        17 ~~~~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~Ei~~l~~l~h--~~i~~~~~~~~~~~~~~~~~e~~~--~~~l~   87 (314)
T cd08216          17 HLAKHKPTNTLVAVKKINLDSC-----SKEDLKLLQQEIITSRQLQH--PNILPYVTSFIVDSELYVVSPLMA--YGSCE   87 (314)
T ss_pred             EEEEecCCCCEEEEEEEecccc-----chhHHHHHHHHHHHHHhcCC--cchhhhhheeecCCeEEEEEeccC--CCCHH
Confidence            4444444333888888643211     12355788899999988753  4433322 4556778899999998  45676


Q ss_pred             HHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          126 KGLIAG--IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       126 ~~l~~g--~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+...  ...     ..++.++...|+-+|...
T Consensus        88 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~  121 (314)
T cd08216          88 DLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG  121 (314)
T ss_pred             HHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            666542  111     246778888888888754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=92.21  E-value=0.63  Score=36.76  Aligned_cols=104  Identities=14%  Similarity=0.009  Sum_probs=62.6

Q ss_pred             ecCCCceeEEEEEEeCC-------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCC
Q 048614           39 EVGDGNLNFVYIVVGSS-------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTM  109 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~~-------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~  109 (165)
                      .+|.|....||++...+       + .++||.-.....      .-...+...|...|+.+..  |..++-+ +..+.+.
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~   73 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT------DQEKKEFLKEAHLMSNFNH--PNIVKLLGVCLLNEP   73 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccc------hhhHHHHHHHHHHHHhcCC--CCeeeEeeeecCCCC
Confidence            47888888999987631       1 466675321110      1123455667777766532  4333322 3456677


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC-------C-----CHHHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGI-------K-----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~-------~-----~~~~a~~iG~~La~~h~~t  152 (165)
                      ..++||+++  ...|.+.+.+..       .     .-.++.+|...|+-+|...
T Consensus        74 ~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  126 (269)
T cd05044          74 QYIIMELME--GGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH  126 (269)
T ss_pred             eEEEEeccC--CCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC
Confidence            899999997  346766665421       1     1246778888888888653

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=92.19  E-value=0.96  Score=35.82  Aligned_cols=106  Identities=17%  Similarity=0.063  Sum_probs=69.8

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPE-VYHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~~~~~~v  113 (165)
                      +..+|.|....||++.... + .+++|.-.....     ..--......|.++|+.+.  .|..++- -+..+.+...+|
T Consensus         4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~~v   76 (282)
T cd07829           4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE-----EEGIPSTALREISLLKELK--HPNIVKLLDVIHTERKLYLV   76 (282)
T ss_pred             ehcccccCcceEEEeeecCCCcEEEEEEeccccc-----cccccHHHHHHHHHHHhcC--CCCHHHHHhhhhcCCceEEE
Confidence            3457888889999998874 4 788887664431     0112345667888888775  2333221 133466789999


Q ss_pred             EecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+.+ .  .|++.+.+.  ...    -.++.++...|+.+|...
T Consensus        77 ~e~~~-~--~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  118 (282)
T cd07829          77 FEYCD-M--DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR  118 (282)
T ss_pred             ecCcC-c--CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99997 2  577777665  222    246778888889898764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=92.10  E-value=1.3  Score=35.75  Aligned_cols=104  Identities=18%  Similarity=0.125  Sum_probs=63.8

Q ss_pred             eEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcC
Q 048614           37 IKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~  107 (165)
                      ...+|.|..+-||++...      .+ .+.+|......       .-.......|.+.|+....  | .+.+++  ..+.
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~   79 (291)
T cd05094          10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-------LAARKDFQREAELLTNLQH--E-HIVKFYGVCGDG   79 (291)
T ss_pred             eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-------HHHHHHHHHHHHHHhcCCC--C-CcceEEEEEccC
Confidence            467888988999999743      12 36666643211       1112344556666665532  3 334443  3345


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC-----------------C----CHHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGI-----------------K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~-----------------~----~~~~a~~iG~~La~~h~~t  152 (165)
                      +...+||||++  ..+|.+.+..+.                 .    .-.++.+|...|+.+|...
T Consensus        80 ~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  143 (291)
T cd05094          80 DPLIMVFEYMK--HGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH  143 (291)
T ss_pred             CceEEEEecCC--CCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            66799999997  347777665421                 1    1257788999999998765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=92.06  E-value=4.9  Score=31.89  Aligned_cols=105  Identities=11%  Similarity=-0.003  Sum_probs=65.0

Q ss_pred             eEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC
Q 048614           37 IKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTM  109 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~  109 (165)
                      .+.+|.|....||++...    .+ .+.+|.-.....      .-...+...|...|+.+.   -..+++++.+  +.+.
T Consensus        10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~------~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~   80 (266)
T cd05064          10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS------DKQRRGFLAEALTLGQFD---HSNIVRLEGVITRGNT   80 (266)
T ss_pred             eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC------HHHHHHHHHHHHHHhcCC---CCCcCeEEEEEecCCC
Confidence            356899999999998653    22 577777653211      011234455666665542   2345555544  5567


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC-C-C----HHHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGI-K-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~-~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+||||++  ...|.+.+.+.. . .    -.++.+|...|+.+|...
T Consensus        81 ~~lv~e~~~--~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~  127 (266)
T cd05064          81 MMIVTEYMS--NGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG  127 (266)
T ss_pred             cEEEEEeCC--CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            889999998  347777666532 2 1    256778888888898654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=92.05  E-value=2.6  Score=33.09  Aligned_cols=105  Identities=16%  Similarity=0.087  Sum_probs=63.1

Q ss_pred             EecCCCceeEEEEEEeCC----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CC--
Q 048614           38 KEVGDGNLNFVYIVVGSS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RT--  108 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~--  108 (165)
                      +.+|.|....||++....    + .++||.......     -.-..++...|.+.|+....  |. +.+++.+.  .+  
T Consensus         5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--~~-iv~~~~~~~~~~~~   76 (273)
T cd05035           5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-----TYSEIEEFLSEAACMKDFDH--PN-VMKLIGVCFEASSL   76 (273)
T ss_pred             cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-----CHHHHHHHHHHHHHHHhCCC--CC-eeeEEeeeccCCcc
Confidence            567889999999987642    2 588886432111     01123466777777776542  43 34444322  22  


Q ss_pred             ----CceEEEecCCCCchHHHHHHHcC------CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          109 ----MSLIGMRYLEPPHIILRKGLIAG------IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ----~~~~vMEdL~~~~~~lr~~l~~g------~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                          ...++|||+.  +..|...+...      ...     -.++.++...|+.+|...
T Consensus        77 ~~~~~~~~v~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~  133 (273)
T cd05035          77 QKIPKPMVILPFMK--HGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN  133 (273)
T ss_pred             ccCcccEEEEeccC--CCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                2589999997  44666555331      111     236788889999998754

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=91.99  E-value=2.6  Score=34.46  Aligned_cols=108  Identities=13%  Similarity=0.064  Sum_probs=64.3

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~~~  112 (165)
                      .+..+|.|....||++.+.. + .++||+.......  .  .-...+...|.+.|+.+..  |..++-. ++.+.....+
T Consensus        19 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~--~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~l   92 (308)
T cd06634          19 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ--S--NEKWQDIIKEVRFLQKLRH--PNTIQYRGCYLREHTAWL   92 (308)
T ss_pred             HHHheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc--C--hHHHHHHHHHHHHHHhCCC--CCcccEEEEEEcCCeeEE
Confidence            46678888888999998763 4 6888866422111  0  0112355667777877642  4433332 3457778889


Q ss_pred             EEecCCCCchHHHHHHH-cCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLI-AGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~-~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||+. +  .+...+. .+...     -.++.++...|..+|...
T Consensus        93 v~e~~~-~--~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~  135 (308)
T cd06634          93 VMEYCL-G--SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN  135 (308)
T ss_pred             EEEccC-C--CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997 3  2333332 23222     134556777777788643

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=91.89  E-value=1.3  Score=37.70  Aligned_cols=84  Identities=17%  Similarity=0.019  Sum_probs=51.6

Q ss_pred             eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 048614           36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D  106 (165)
                      -.+.+|.|....||++...      ++ .+.||....-..      .-..++...|.++|+.+... |. +++++.  .+
T Consensus        42 ~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~il~~l~~h-~n-Iv~~~~~~~~  113 (374)
T cd05106          42 FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH------TDEREALMSELKILSHLGQH-KN-IVNLLGACTH  113 (374)
T ss_pred             ehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC------HHHHHHHHHHHHHHHhhccC-Cc-eeeEeeEecC
Confidence            4678999999999998742      22 577777653221      11235666788888766332 33 344443  34


Q ss_pred             CCCceEEEecCCCCchHHHHHHH
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLI  129 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~  129 (165)
                      .....+||||++ . .+|.+.+.
T Consensus       114 ~~~~~lv~ey~~-~-g~L~~~l~  134 (374)
T cd05106         114 GGPVLVITEYCC-Y-GDLLNFLR  134 (374)
T ss_pred             CCCeEEeHhhcc-C-CcHHHHHH
Confidence            566789999997 3 35555543

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=91.83  E-value=2.4  Score=34.35  Aligned_cols=106  Identities=17%  Similarity=0.076  Sum_probs=65.4

Q ss_pred             eEecCCCceeEEEEEEeCC-C---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCc
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~  110 (165)
                      ...+|.|....||++.+.+ +   .+.+|........      ....+...|.+.++.+... |..+ +++.+  +....
T Consensus         7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~E~~~l~~l~~h-p~iv-~~~~~~~~~~~~   78 (297)
T cd05089           7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASE------NDHRDFAGELEVLCKLGHH-PNII-NLLGACENRGYL   78 (297)
T ss_pred             eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCH------HHHHHHHHHHHHHHhhcCC-Cchh-heEEEEccCCcc
Confidence            4578999999999997653 2   3566654432221      1234666777777666432 4433 34433  44556


Q ss_pred             eEEEecCCCCchHHHHHHHcCC-----------------C----CHHHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGI-----------------K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~-----------------~----~~~~a~~iG~~La~~h~~t  152 (165)
                      .++|||.+  ...|.+.+....                 .    .-.++.+|...|+.+|...
T Consensus        79 ~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~  139 (297)
T cd05089          79 YIAIEYAP--YGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ  139 (297)
T ss_pred             eEEEEecC--CCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            89999997  346766665432                 1    1246778888999999754

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=91.81  E-value=1.1  Score=39.81  Aligned_cols=104  Identities=13%  Similarity=0.035  Sum_probs=64.0

Q ss_pred             eeEecCCCceeEEEEEEeC-C-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCc
Q 048614           36 TIKEVGDGNLNFVYIVVGS-S-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~  110 (165)
                      -.+.+|.|..-.||++... + + .+++|......       .-...+.+.|.++|+.+..  | .+++++  +.+.+..
T Consensus        71 ~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-------~~~~~~~~~E~~~l~~l~H--p-niv~~~~~~~~~~~~  140 (478)
T PTZ00267         71 LTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND-------ERQAAYARSELHCLAACDH--F-GIVKHFDDFKSDDKL  140 (478)
T ss_pred             EEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC-------HHHHHHHHHHHHHHHhCCC--C-CEeEEEEEEEECCEE
Confidence            4567788888889988764 3 3 68888643111       1122455667777766542  2 344444  3466788


Q ss_pred             eEEEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhc
Q 048614          111 LIGMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      .+||||++  ...|.+.|.+    ...+     -.++.+|...|..+|..
T Consensus       141 ~lv~E~~~--gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~  188 (478)
T PTZ00267        141 LLIMEYGS--GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR  188 (478)
T ss_pred             EEEEECCC--CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999997  3355544432    2222     13667888889988865

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=91.76  E-value=2.6  Score=34.90  Aligned_cols=107  Identities=14%  Similarity=0.012  Sum_probs=66.8

Q ss_pred             eeEecCCCceeEEEEEEeC--------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--
Q 048614           36 TIKEVGDGNLNFVYIVVGS--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--  104 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--  104 (165)
                      -.+.+|.|....||++...        .+ .+.+|.......      .-...+...|.++++.+... |..+. ++.  
T Consensus        16 i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~~iv~-~~~~~   87 (334)
T cd05100          16 LGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT------DKDLSDLVSEMEMMKMIGKH-KNIIN-LLGAC   87 (334)
T ss_pred             ecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC------HHHHHHHHHHHHHHHhhcCC-CCeee-eeEEE
Confidence            3578999999999999642        11 467775542211      11234667788888766433 43333 332  


Q ss_pred             EcCCCceEEEecCCCCchHHHHHHHcCC----------------CC-----HHHHHHHHHHHHHHHhcc
Q 048614          105 FDRTMSLIGMRYLEPPHIILRKGLIAGI----------------KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~D~~~~~~vMEdL~~~~~~lr~~l~~g~----------------~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+.....++|||++  ..+|++.+....                ..     -.++.+|...|+-+|...
T Consensus        88 ~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g  154 (334)
T cd05100          88 TQDGPLYVLVEYAS--KGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK  154 (334)
T ss_pred             ccCCceEEEEecCC--CCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34455679999998  347888776421                11     136778999999999654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=91.75  E-value=2.2  Score=35.38  Aligned_cols=106  Identities=11%  Similarity=0.032  Sum_probs=64.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--------E
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--------F  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--------~  105 (165)
                      .+..+|.|....||++.+. ++ .++||....-..     -.....+...|.++|+.+..  |..+ +++.        .
T Consensus        19 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~~iv-~~~~~~~~~~~~~   90 (343)
T cd07878          19 NLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-----SLIHARRTYRELRLLKHMKH--ENVI-GLLDVFTPATSIE   90 (343)
T ss_pred             hheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-----hhHHHHHHHHHHHHHHhcCC--Cchh-hhhhhhccccccc
Confidence            4578999999999999875 34 788997542111     11234566778888887753  2222 1111        1


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ......++||+++.   .|...+..+...    -.++.+|...|.-+|...
T Consensus        91 ~~~~~~~~~~~~~~---~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  138 (343)
T cd07878          91 NFNEVYLVTNLMGA---DLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAG  138 (343)
T ss_pred             ccCcEEEEeecCCC---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            22345788998863   343433333332    257788888888898654

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=91.58  E-value=2  Score=33.66  Aligned_cols=104  Identities=14%  Similarity=0.093  Sum_probs=62.4

Q ss_pred             ecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           39 EVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      .+|.|....||++...    .+ .+++|.......      .-..++...|...|+...  .|..++-.-.+  +.....
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~~   73 (262)
T cd05058           2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD------LEEVEQFLKEGIIMKDFS--HPNVLSLLGICLPSEGSPL   73 (262)
T ss_pred             cccccCCceEEEEEEecCCCceEEEEEEecCccCC------HHHHHHHHHHHHHHccCC--CCCcceEEEEeecCCCCcE
Confidence            5788888999998753    12 588886432111      112345556766665543  24444433222  334578


Q ss_pred             EEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+..  ...|.+.+....  ..    -.++.+|...|+.+|...
T Consensus        74 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  118 (262)
T cd05058          74 VVLPYMK--HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK  118 (262)
T ss_pred             EEEecCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  346777765432  11    246678899999998754

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=91.55  E-value=1.5  Score=38.57  Aligned_cols=102  Identities=19%  Similarity=0.283  Sum_probs=74.5

Q ss_pred             EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEE
Q 048614           38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT--MSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~--~~~~v  113 (165)
                      ..||.|+.-.+|-.++- ++ -|-||...-+.+.  |       -.+-|++..+.++.  -.-+|.+|+|-++  -+++|
T Consensus        34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A--P-------QLrdEYr~YKlL~g--~~GIP~vYYFGqeG~~NiLV  102 (449)
T KOG1165|consen   34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA--P-------QLRDEYRTYKLLGG--TEGIPQVYYFGQEGKYNILV  102 (449)
T ss_pred             cccccCcceeeecccccccCceEEEEeccccCCc--c-------hHHHHHHHHHHHcC--CCCCCceeeeccccchhhhh
Confidence            46889999999888764 45 8999988755542  2       46789999998884  2347999999997  48999


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||-|+|....|=+ +. |..|     ..+|.++-+-+-.+|...
T Consensus       103 idLLGPSLEDLFD-~C-gR~FSvKTV~miA~Qmi~rie~vH~k~  144 (449)
T KOG1165|consen  103 IDLLGPSLEDLFD-LC-GRRFSVKTVAMIAKQMITRIEYVHEKD  144 (449)
T ss_pred             hhhhCcCHHHHHH-Hh-cCcccHHhHHHHHHHHHHHHHHHHhcc
Confidence            9999986666633 33 4433     246777777777777653

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=91.19  E-value=5.2  Score=34.79  Aligned_cols=109  Identities=18%  Similarity=0.127  Sum_probs=70.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCC-CChHHHHHHHHHHHHhhccCCC--CCceEEEEcCCCc
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWP-MTKERAYFEALALKEHGQLCPD--HVPEVYHFDRTMS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~-l~~~R~~~E~~~L~~~~~~~p~--~vP~v~~~D~~~~  110 (165)
                      -...+|.|+..-|+..... .| .+.+| -..+-.+  ..+. .-..+...|...|+..... |.  ..-+++ ..+...
T Consensus        21 ~~~~lG~GsfgkV~~a~~~~t~~~vAiK-ii~~~~~--~~~~~~~~~~i~rEi~~~~~~~~H-pnI~~l~ev~-~t~~~~   95 (370)
T KOG0583|consen   21 LGRTLGSGSFGKVKLAKHRLTGEKVAIK-IIDRKKV--SSKSQKLDELIKREISILRRLRSH-PNIIRLLEVF-ATPTKI   95 (370)
T ss_pred             eeeeecCCCCeeEEEeeeccCCCeEEEE-Eechhcc--cccccccchhhHHHHHHHHHhccC-CCEeEEEEEE-ecCCeE
Confidence            5678999999999999665 44 78888 3333222  2233 3445666788888888754 32  123333 344558


Q ss_pred             eEEEecCCCCchHHHHHHHc-CCCCH----HHHHHHHHHHHHHHhc
Q 048614          111 LIGMRYLEPPHIILRKGLIA-GIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~-g~~~~----~~a~~iG~~La~~h~~  151 (165)
                      .+||||+. +. .|-+.+.+ |..-+    .+-.||-..++-.|..
T Consensus        96 ~ivmEy~~-gG-dL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~  139 (370)
T KOG0583|consen   96 YIVMEYCS-GG-DLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR  139 (370)
T ss_pred             EEEEEecC-Cc-cHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC
Confidence            99999998 44 55555555 55443    3557788888888877

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=91.09  E-value=2.5  Score=33.94  Aligned_cols=110  Identities=15%  Similarity=0.021  Sum_probs=67.8

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH  104 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      .++ ..+.+|.|....||++...      .+ .+++|.......      .-...+...|.+.|+...+. |..+ +++.
T Consensus        12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~~i~-~~~~   83 (293)
T cd05053          12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT------EKDLSDLVSEMEMMKMIGKH-KNII-NLLG   83 (293)
T ss_pred             hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC------HHHHHHHHHHHHHHHhhcCC-CCee-eEEE
Confidence            344 4577898888999998753      12 578886553221      11224566788888776432 3332 2333


Q ss_pred             --EcCCCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 048614          105 --FDRTMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 --~D~~~~~~vMEdL~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                        .+.....++|||++ + .+|...+....                 ..    -.++.+|...|+-+|...
T Consensus        84 ~~~~~~~~~li~e~~~-~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~  152 (293)
T cd05053          84 VCTQEGPLYVVVEYAA-H-GNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK  152 (293)
T ss_pred             EEcCCCCeEEEEEeCC-C-CcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence              34456789999998 3 37777664321                 11    247888999999999653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=90.93  E-value=1.9  Score=35.95  Aligned_cols=105  Identities=19%  Similarity=0.152  Sum_probs=63.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--------E
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--------F  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--------~  105 (165)
                      .+..+|.|....||++.+. +| .++||.......     ......+...|.++|+.+..  |..+ +++.        .
T Consensus        19 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--~niv-~~~~~~~~~~~~~   90 (342)
T cd07879          19 SLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-----SEIFAKRAYRELTLLKHMQH--ENVI-GLLDVFTSAVSGD   90 (342)
T ss_pred             EEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-----cccchhHHHHHHHHHHhcCC--CCcc-chhheecccccCC
Confidence            5688899998999999865 45 799996542111     11223456678888876642  3222 2222        1


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +.....++||+++.   .++..+ .....    ..++.++...|+-+|...
T Consensus        91 ~~~~~~lv~e~~~~---~l~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~  137 (342)
T cd07879          91 EFQDFYLVMPYMQT---DLQKIM-GHPLSEDKVQYLVYQMLCGLKYIHSAG  137 (342)
T ss_pred             CCceEEEEeccccc---CHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            22345899999972   344433 22221    246778888999998765

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=90.45  E-value=0.62  Score=36.53  Aligned_cols=63  Identities=17%  Similarity=0.115  Sum_probs=43.8

Q ss_pred             HHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 048614           82 YFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus        82 ~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                      ..|.++++.+++  -+..|++|+++++.  .|.||+.  +..+...-   -..|.+...|+..|+++|...-
T Consensus        21 ~~E~~~~~~l~~--~g~~p~~~~~~~~g--~v~e~i~--g~~l~~~~---~~~~~~~~~iA~~l~~lH~~~~   83 (211)
T PF01633_consen   21 ENENEALKLLSE--AGLGPKIIYFFENG--RVEEFIE--GRTLSPED---FRNPEILKRIAKLLAKLHSIPI   83 (211)
T ss_dssp             HHHHHHHHHHHH--TTSSS-EEEEETTE--EEEE--S--SEE--CGG---GGSHHHHHHHHHHHHHHHTHHH
T ss_pred             HHHHHHHHHHHH--cCCCCeEEEEcCCC--cEEEEec--ccccChhh---ccChHHHHHHHHHHHHHhhccc
Confidence            568889988887  47899999998665  5779996  55554321   1346789999999999998654

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>cd05124 AFK Actin-Fragmin Kinase (AFK); catalytic domain

Probab=90.38  E-value=2  Score=35.44  Aligned_cols=30  Identities=20%  Similarity=0.298  Sum_probs=25.7

Q ss_pred             ceeEecCCCceeEEEEEEeCCCeEEEeecC
Q 048614           35 LTIKEVGDGNLNFVYIVVGSSGSFVIKQAL   64 (165)
Q Consensus        35 ~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~   64 (165)
                      +++...|||++-.++-|...+|.+|||-+.
T Consensus         2 ie~i~~s~s~~~~~~F~~s~~~a~ViK~s~   31 (238)
T cd05124           2 IKAIDLSDSGVFGALFVESESGAIVVKSSP   31 (238)
T ss_pred             ceEEEecCCceEEEEEEcCCCcEEEEEcCc
Confidence            578889999999888888777899999874

The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating ac

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=90.26  E-value=3.4  Score=32.31  Aligned_cols=93  Identities=13%  Similarity=0.076  Sum_probs=53.8

Q ss_pred             CceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEEecCC
Q 048614           43 GNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLIGMRYLE  118 (165)
Q Consensus        43 Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~vMEdL~  118 (165)
                      |...-||+|.+. +| .+++|+-.....       .     ..|...+.  ....|. +++++  +.+.+...++|||++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-------~-----~~~~~~~~--~~~~~~-i~~~~~~~~~~~~~~lv~e~~~   68 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-------Y-----SRERLTII--PHCVPN-MVCLHKYIVSEDSVFLVLQHAE   68 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh-------h-----hhHHHHHH--hcCCCc-eeehhhheecCCeEEEEEecCC
Confidence            666779999886 44 899998643211       1     11222111  111233 23333  346678899999998


Q ss_pred             CCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          119 PPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       119 ~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                       + ..|.+.+.+....     -.++.++...|..+|...
T Consensus        69 -~-~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~  105 (237)
T cd05576          69 -G-GKLWSHISKFLNIPEECVKRWAAEMVVALDALHREG  105 (237)
T ss_pred             -C-CCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             3 3666666554322     246677788888888654

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PTZ00036 glycogen synthase kinase; Provisional

Probab=90.21  E-value=5  Score=35.19  Aligned_cols=104  Identities=14%  Similarity=0.148  Sum_probs=59.9

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEc------
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFD------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D------  106 (165)
                      -.+.+|.|....||++... .+ .++||.-...     .      .....|..+|+.+..  |..++-. ++++      
T Consensus        70 ~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~-----~------~~~~~Ei~il~~l~h--~niv~l~~~~~~~~~~~~  136 (440)
T PTZ00036         70 LGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-----P------QYKNRELLIMKNLNH--INIIFLKDYYYTECFKKN  136 (440)
T ss_pred             EeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC-----c------chHHHHHHHHHhcCC--CCCcceeeeEeecccccC
Confidence            4677899999999999875 34 7889865311     1      123358888877643  4333321 1111      


Q ss_pred             CCC--ceEEEecCCCCc-hHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          107 RTM--SLIGMRYLEPPH-IILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~--~~~vMEdL~~~~-~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      ...  ..+||||++.+. ..++.....+...+     .++.+|...|+-+|...
T Consensus       137 ~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~  190 (440)
T PTZ00036        137 EKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF  190 (440)
T ss_pred             CCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            111  237999998321 11222222333222     35678888999999754

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=90.02  E-value=5.1  Score=34.89  Aligned_cols=103  Identities=18%  Similarity=0.001  Sum_probs=70.9

Q ss_pred             cCCCceeEEEEEEeCCCe-EEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC---CceEEEe
Q 048614           40 VGDGNLNFVYIVVGSSGS-FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT---MSLIGMR  115 (165)
Q Consensus        40 l~~Gn~N~v~rv~~~~gs-vIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~---~~~~vME  115 (165)
                      +|.|.--.||+..-.+.. +.||...+--... ..    ..+.+.|+..|..++-  |..|. ++..=.+   ...+|||
T Consensus        49 iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~-~~----~~~f~~E~~il~~l~H--pNIV~-f~G~~~~~~~~~~iVtE  120 (362)
T KOG0192|consen   49 LGSGSFGTVYKGKWRGTDVVAVKIISDPDFDD-ES----RKAFRREASLLSRLRH--PNIVQ-FYGACTSPPGSLCIVTE  120 (362)
T ss_pred             cccCCceeEEEEEeCCceeEEEEEecchhcCh-HH----HHHHHHHHHHHHhCCC--CCeee-EEEEEcCCCCceEEEEE
Confidence            888999999999877555 8888877655431 21    7788888888887433  44444 5554444   3689999


Q ss_pred             cCCCCchHHHHHHHc---CCCCH----HHHHHHHHHHHHHHhcc
Q 048614          116 YLEPPHIILRKGLIA---GIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dL~~~~~~lr~~l~~---g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      |++  ...|++.|..   +...+    .+|.+|++-|--+|...
T Consensus       121 y~~--~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~  162 (362)
T KOG0192|consen  121 YMP--GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEG  162 (362)
T ss_pred             eCC--CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            998  3478887755   33333    56777777776677655

>PHA03207 serine/threonine kinase US3; Provisional

Probab=89.82  E-value=5.6  Score=33.99  Aligned_cols=100  Identities=10%  Similarity=-0.054  Sum_probs=63.9

Q ss_pred             eeEecCCCceeEEEEEEeC---CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCc
Q 048614           36 TIKEVGDGNLNFVYIVVGS---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV-YHFDRTMS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~~~~  110 (165)
                      -+..+|.|....||++...   .+ .++||....      .      .....|.++|+.+..  |..++-+ .+.+....
T Consensus        96 i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~------~------~~~~~E~~il~~l~h--~~iv~~~~~~~~~~~~  161 (392)
T PHA03207         96 ILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTG------G------KTPGREIDILKTISH--RAIINLIHAYRWKSTV  161 (392)
T ss_pred             EEEeecCCCCeEEEEEEEcCCccceeEEEEeccc------c------ccHHHHHHHHHhcCC--CCccceeeeEeeCCEE
Confidence            4577899999999998653   23 688886431      1      123468888887753  4444332 23345667


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .++||+++.   .+.+.+......     -.++.+|...|+-+|...
T Consensus       162 ~lv~e~~~~---~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~g  205 (392)
T PHA03207        162 CMVMPKYKC---DLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRG  205 (392)
T ss_pred             EEEehhcCC---CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            899999872   454555433222     257788888899999764

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=89.62  E-value=4.4  Score=35.48  Aligned_cols=105  Identities=18%  Similarity=0.181  Sum_probs=71.4

Q ss_pred             EecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCC--CceEEEEcCCCceEE
Q 048614           38 KEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDH--VPEVYHFDRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~--vP~v~~~D~~~~~~v  113 (165)
                      +++|.|..-.||++.... | .+-+|.-...... +.   .+.+-...|..+|+.+... |..  ++.+ +-|+..-.+|
T Consensus        41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~-~~---~~~~~v~~Ev~il~~l~~h-pniv~l~~~-~e~~~~~~lv  114 (382)
T KOG0032|consen   41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLR-GK---EDREDVRREVAILQQLSGH-PNIVQLKDA-FEDPDSVYLV  114 (382)
T ss_pred             hhhCCCCceEEEEEEecCCCceeEEEEeehhhcc-cc---ccHHHHHHHHHHHHhccCC-CCEEEEEEE-EEcCCeEEEE
Confidence            599999999999999874 5 5666665433321 22   2667888999999988762 332  2332 2344566899


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ||.+.  +..|-+.+.+.. +     ..++.+|...+..+|..
T Consensus       115 mEL~~--GGeLfd~i~~~~-~sE~da~~~~~~il~av~~lH~~  154 (382)
T KOG0032|consen  115 MELCE--GGELFDRIVKKH-YSERDAAGIIRQILEAVKYLHSL  154 (382)
T ss_pred             EEecC--CchHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHhC
Confidence            99998  346667777652 3     35677777888888873

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=89.58  E-value=1.8  Score=35.64  Aligned_cols=110  Identities=17%  Similarity=0.120  Sum_probs=64.1

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCC-C------hHHHHHHHHHHHHhhccCC---CCCceEEEE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPM-T------KERAYFEALALKEHGQLCP---DHVPEVYHF  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l-~------~~R~~~E~~~L~~~~~~~p---~~vP~v~~~  105 (165)
                      .++.+.+..-|+|.+|..+++++|+|.-++..+..  +..+ +      ..|....-.-++..+-..+   -.+..--.+
T Consensus        35 ~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~--er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~  112 (229)
T PF06176_consen   35 IIKVFKNTKRNYVALIEIDGKKYILKEPREENRRP--ERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKIF  112 (229)
T ss_pred             EEEeecCCCccEEEEEEECCcEEEEeccchhhhhH--HHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeeec
Confidence            55788899999999999988899999998876542  1000 0      1111111111211111111   123333333


Q ss_pred             c-CCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          106 D-RTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D-~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      . ...++++|||+.  +..+-+..   ...+.+++.|...+-++|...
T Consensus       113 ~~~~~~~ll~EYIe--G~~l~d~~---~i~e~~~~ki~~~ikqlH~~G  155 (229)
T PF06176_consen  113 RYTSSYVLLMEYIE--GVELNDIE---DIDEDLAEKIVEAIKQLHKHG  155 (229)
T ss_pred             cceeEEEEEEEEec--Ceecccch---hcCHHHHHHHHHHHHHHHHcC
Confidence            2 355678999998  34443311   134567888889999999764

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=89.51  E-value=5.3  Score=31.49  Aligned_cols=105  Identities=15%  Similarity=0.095  Sum_probs=64.4

Q ss_pred             EecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--C--
Q 048614           38 KEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR--T--  108 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--~--  108 (165)
                      +.+|.|....||++...    .+ .++||+-......     ....++...|...|+.+..  | .+.+++.+-.  +  
T Consensus         5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~~~~   76 (273)
T cd05074           5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFS-----SSDIEEFLREAACMKEFDH--P-NVIKLIGVSLRSRAK   76 (273)
T ss_pred             hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCC-----hHHHHHHHHHHHHHhcCCC--C-CcceEEEEEccCCCC
Confidence            46788888999999753    24 7999987654422     1234567778887776642  4 3455554321  1  


Q ss_pred             ----CceEEEecCCCCchHHHHHHHc----CCC-------CHHHHHHHHHHHHHHHhcc
Q 048614          109 ----MSLIGMRYLEPPHIILRKGLIA----GIK-------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ----~~~~vMEdL~~~~~~lr~~l~~----g~~-------~~~~a~~iG~~La~~h~~t  152 (165)
                          ...++|||..  ...|...+..    ++.       .-.++.+|...|+-+|...
T Consensus        77 ~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~  133 (273)
T cd05074          77 GRLPIPMVILPFMK--HGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN  133 (273)
T ss_pred             CcccceEEEEecCC--CCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                1257888886  2355554432    111       1357788888899888765

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=89.38  E-value=5.1  Score=33.04  Aligned_cols=104  Identities=12%  Similarity=-0.015  Sum_probs=61.0

Q ss_pred             ecCCC--ceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCceE
Q 048614           39 EVGDG--NLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSLI  112 (165)
Q Consensus        39 ~l~~G--n~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~~  112 (165)
                      ++|.|  +...||++.+. .| .+.||.-..--..  .   -..++...|...++.+..  |. +.++  ++.+.+...+
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~--~---~~~~~~~~e~~~~~~l~h--~n-iv~~~~~~~~~~~~~~   76 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT--E---EHLKALQNEVVLSHFFRH--PN-IMTSWTVFTTGSWLWV   76 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC--H---HHHHHHHHHHHHHHhCCC--CC-cceEeeeEecCCceEE
Confidence            45666  55669999875 44 7888875421110  0   112455566666654432  33 3333  3336677889


Q ss_pred             EEecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||++.  +..+.+.+....  ..     -.++.+|...|+-+|...
T Consensus        77 v~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~  121 (328)
T cd08226          77 ISPFMA--YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG  121 (328)
T ss_pred             EEeccc--CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997  345555554321  11     147788899999998643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=89.30  E-value=8.4  Score=32.15  Aligned_cols=107  Identities=13%  Similarity=0.070  Sum_probs=63.6

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      .++.+|.|....||++.+. +| .+++|.-..-.     .-....++...|.+.|+.+..  |..++-.-.+.       
T Consensus        21 ~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~Ei~~l~~l~h--~~iv~~~~~~~~~~~~~~   93 (345)
T cd07877          21 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-----QSIIHAKRTYRELRLLKHMKH--ENVIGLLDVFTPARSLEE   93 (345)
T ss_pred             EEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc-----hhhHHHHHHHHHHHHHHHcCC--Ccccceeeeeeecccccc
Confidence            5678999999999999865 45 78888554211     112234567778888877643  33333221121       


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....++||+++.   .+...+..+...    -.++.+|...|+-+|...
T Consensus        94 ~~~~~lv~~~~~~---~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  140 (345)
T cd07877          94 FNDVYLVTHLMGA---DLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD  140 (345)
T ss_pred             cccEEEEehhccc---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            1234567777652   444444333322    246778888888898765

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=89.27  E-value=4.6  Score=32.15  Aligned_cols=105  Identities=15%  Similarity=0.043  Sum_probs=63.3

Q ss_pred             eEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614           37 IKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      ++++|.|....||++...      .+ .++||.......      .-..++...|...++.+.  .|..+ +++.  .+.
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~~~~l~--h~~iv-~~~~~~~~~   80 (283)
T cd05091          10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE------GPLREEFKHEAMMRSRLQ--HPNIV-CLLGVVTKE   80 (283)
T ss_pred             HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC------HHHHHHHHHHHHHHhcCC--CCCcC-eEEEEEcCC
Confidence            456788888899999753      12 688887652221      111244556666665443  24333 3333  345


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ....++|||.+  ...+...+..+.                 ..    -.++.++...|.-+|...
T Consensus        81 ~~~~~~~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g  144 (283)
T cd05091          81 QPLSMIFSYCS--HSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH  144 (283)
T ss_pred             CceEEEEEcCC--CCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence            66778999987  456766664211                 11    146778899999998654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=89.12  E-value=11  Score=30.82  Aligned_cols=107  Identities=13%  Similarity=0.057  Sum_probs=64.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCC-CChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWP-MTKERAYFEALALKEHGQLCPDHVPEVY-HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~-l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~~~~~  111 (165)
                      .+..+|.|....||++.+. +| .+++|.-.. .    ..+. -...+...|.+.|+.+..  |..++-.- +.+.....
T Consensus        29 ~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~-~----~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~  101 (317)
T cd06635          29 DLREIGHGSFGAVYFARDVRTNEVVAIKKMSY-S----GKQSNEKWQDIIKEVKFLQRIKH--PNSIEYKGCYLREHTAW  101 (317)
T ss_pred             hhheeccCCCeEEEEEEEcCCCcEEEEEEEec-C----CCCchHHHHHHHHHHHHHHhCCC--CCEEEEEEEEeeCCeEE
Confidence            5677999999999999875 34 788885421 1    0111 112356667777776642  44333332 33667788


Q ss_pred             EEEecCCCCchHHHHHHHc-CC-CC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIA-GI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~-g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||+++   .+-+.+.. +. ..    -.++.+|...|+-+|...
T Consensus       102 lv~e~~~g---~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~  145 (317)
T cd06635         102 LVMEYCLG---SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN  145 (317)
T ss_pred             EEEeCCCC---CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999973   23233322 22 21    235678888888888764

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=88.36  E-value=7  Score=34.00  Aligned_cols=84  Identities=15%  Similarity=0.051  Sum_probs=52.9

Q ss_pred             eEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 048614           37 IKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      .+.+|.|-...||++...      .+ .+.||.-..-.+      .-...+...|.++|+.+... | ++.+++.+  +.
T Consensus        42 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~------~~~~~~~~~E~~~l~~l~~H-~-niv~~~~~~~~~  113 (401)
T cd05107          42 GRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR------SSEKQALMSELKIMSHLGPH-L-NIVNLLGACTKG  113 (401)
T ss_pred             hhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC------hhHHHHHHHHHHHHHhcCCC-C-CeEEEEEEEccC
Confidence            468999999999999853      12 588887642211      11234667788888776432 3 34444433  33


Q ss_pred             CCceEEEecCCCCchHHHHHHHc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIA  130 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~  130 (165)
                      ....+||||++  ..+|.+.+.+
T Consensus       114 ~~~~iv~E~~~--~g~L~~~l~~  134 (401)
T cd05107         114 GPIYIITEYCR--YGDLVDYLHR  134 (401)
T ss_pred             CCcEEEEeccC--CCcHHHHHHh
Confidence            45689999998  3467666643

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=88.04  E-value=3.3  Score=37.09  Aligned_cols=110  Identities=17%  Similarity=0.076  Sum_probs=61.9

Q ss_pred             cc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc---eEEEEcC
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP---EVYHFDR  107 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP---~v~~~D~  107 (165)
                      .+ -.+.+|.|....||++.+. +| .+.||.-...-.     -.-...|...|..+|....-  |..+.   .....|+
T Consensus        33 rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-----~~~~~~~~~~Ei~~l~~~~h--~~iv~~~~~~~~~~~  105 (496)
T PTZ00283         33 KYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-----SEADKNRAQAEVCCLLNCDF--FSIVKCHEDFAKKDP  105 (496)
T ss_pred             CEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-----CHHHHHHHHHHHHHHhcCCC--CcEEEeecceecccc
Confidence            44 4568999999999999865 45 799997432110     01122345555555554321  11111   0111111


Q ss_pred             ---C---CceEEEecCCCCchHHHHHHHcC----CCCH-----HHHHHHHHHHHHHHhcc
Q 048614          108 ---T---MSLIGMRYLEPPHIILRKGLIAG----IKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ---~---~~~~vMEdL~~~~~~lr~~l~~g----~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                         .   ...+||||++  ...|++.+...    ..++     .++.++...|..+|...
T Consensus       106 ~~~~~~~~i~lV~Ey~~--~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~  163 (496)
T PTZ00283        106 RNPENVLMIALVLDYAN--AGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH  163 (496)
T ss_pred             cCcccceEEEEEEeCCC--CCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence               1   1358999998  34677766542    2222     36778888999999643

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=87.93  E-value=3.3  Score=34.82  Aligned_cols=33  Identities=21%  Similarity=0.181  Sum_probs=23.6

Q ss_pred             HHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCC
Q 048614           84 EALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEP  119 (165)
Q Consensus        84 E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~  119 (165)
                      |+.-|+.+.+. ...||+.|  .-.++++|||++|.
T Consensus       118 Ef~NL~R~~eA-GVrvP~Pi--~~~~nVLvMEfIg~  150 (268)
T COG1718         118 EFRNLKRAYEA-GVRVPEPI--AFRNNVLVMEFIGD  150 (268)
T ss_pred             HHHHHHHHHHc-CCCCCCce--eecCCeEEEEeccC
Confidence            33344444443 57899998  55899999999995

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=87.87  E-value=5  Score=33.58  Aligned_cols=83  Identities=16%  Similarity=0.035  Sum_probs=47.7

Q ss_pred             eEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614           37 IKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      .+.+|.|....||++...      .+ .+++|+-..-..      .-...+...|...++.+... |. +.+++.  +++
T Consensus        12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~~E~~~~~~l~~h-~n-iv~~~~~~~~~   83 (337)
T cd05054          12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT------ASEYKALMTELKILIHIGHH-LN-VVNLLGACTKP   83 (337)
T ss_pred             hcccccCcCceEEeccccccccccccceeeeeeccCCCC------HHHHHHHHHHHHHHHhhccC-cc-hhheeeeEecC
Confidence            477899999999998532      22 588886542110      01123455677777665321 33 333432  233


Q ss_pred             -CCceEEEecCCCCchHHHHHHH
Q 048614          108 -TMSLIGMRYLEPPHIILRKGLI  129 (165)
Q Consensus       108 -~~~~~vMEdL~~~~~~lr~~l~  129 (165)
                       ....++|||++  +.+|...+.
T Consensus        84 ~~~~~~v~ey~~--~~~L~~~i~  104 (337)
T cd05054          84 GGPLMVIVEYCK--FGNLSNYLR  104 (337)
T ss_pred             CCCEEEEEecCC--CCCHHHHHH
Confidence             34567899998  346655553

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=86.45  E-value=6.5  Score=29.65  Aligned_cols=94  Identities=19%  Similarity=0.088  Sum_probs=60.7

Q ss_pred             EEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEEecCCCCch
Q 048614           47 FVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLIGMRYLEPPHI  122 (165)
Q Consensus        47 ~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~vMEdL~~~~~  122 (165)
                      -||++.... | .+++|........   .+   .++...|.+.++.+..  |. ++.++  ..+.....++||+.+  ..
T Consensus         4 ~v~~~~~~~~~~~~~~k~~~~~~~~---~~---~~~~~~e~~~~~~l~~--~~-i~~~~~~~~~~~~~~l~~e~~~--~~   72 (244)
T smart00220        4 KVYLARDKKTGKLVAIKVIKKEKIK---KK---RERILREISILKKLKH--PN-IVRLYDVFEDEDKLYLVMEYCD--GG   72 (244)
T ss_pred             EEEEEEECCCCcEEEEEEecccccc---cH---HHHHHHHHHHHHhCCC--Cc-HHHHHhheeeCCEEEEEEeCCC--CC
Confidence            578888764 5 8999987644321   11   5788888888877722  32 33333  234478899999998  34


Q ss_pred             HHHHHHHcCC-CC----HHHHHHHHHHHHHHHhc
Q 048614          123 ILRKGLIAGI-KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       123 ~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~  151 (165)
                      .|...+.... ..    -.++.++...++.+|..
T Consensus        73 ~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~  106 (244)
T smart00220       73 DLFDLLKKRGRLSEDEARFYARQILSALEYLHSN  106 (244)
T ss_pred             CHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            7777665543 11    25677788888888865

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=86.32  E-value=10  Score=32.24  Aligned_cols=105  Identities=16%  Similarity=0.253  Sum_probs=73.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~~~~  111 (165)
                      -|+.+|.|..--+|....- +| .|-||-....+|.  |       -..+|+.+.+.++.-.  -.|.+++|-  .+-++
T Consensus        19 lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--p-------qL~yEskvY~iL~~g~--GiP~i~~y~~e~~ynv   87 (341)
T KOG1163|consen   19 LVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--P-------QLLYESKVYRILQGGV--GIPHIRHYGTEKDYNV   87 (341)
T ss_pred             EEEeecCCchhheeeeeeccCCceEEEEeecccCCC--c-------chhHHHHHHHHhccCC--CCchhhhhccccccce
Confidence            7889999999999887654 56 8999998888875  3       3457888887766532  358887776  56789


Q ss_pred             EEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~  151 (165)
                      +||+-|+|....|=....+.-.   ---+|.|+-.-+--+|..
T Consensus        88 lVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r  130 (341)
T KOG1163|consen   88 LVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR  130 (341)
T ss_pred             eeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh
Confidence            9999999866665444433221   124677776666666654

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=86.19  E-value=8.4  Score=35.85  Aligned_cols=105  Identities=17%  Similarity=0.103  Sum_probs=77.8

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCC---CCceEE--EEcCC
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPD---HVPEVY--HFDRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~---~vP~v~--~~D~~  108 (165)
                      ..+.||-|..--|.|..+.. + -|.||--.-..+-        .....+|..+|..+.+.-|+   ++-+.|  ++...
T Consensus       190 V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f--------~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~  261 (586)
T KOG0667|consen  190 VLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF--------LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN  261 (586)
T ss_pred             EEEEecccccceeEEEEecCCCcEEEEEeeccChHH--------HHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence            46678888888888888763 4 6888876654443        26788999999999976565   444444  45567


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCC-------CHHHHHHHHHHHHHHHhc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIK-------YPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~-------~~~~a~~iG~~La~~h~~  151 (165)
                      -..+|.|-|+   .+|.+.|...+-       ...++.+|.+.|..+|-.
T Consensus       262 HlciVfELL~---~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l  308 (586)
T KOG0667|consen  262 HLCIVFELLS---TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL  308 (586)
T ss_pred             ceeeeehhhh---hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            7889999997   699888876542       236899999999999843

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=85.32  E-value=5.6  Score=36.41  Aligned_cols=112  Identities=22%  Similarity=0.230  Sum_probs=70.8

Q ss_pred             CcceeEecCCCceeEEEEEEeCCC-eEEEeecCccccc------------------cCC-CCCCChHHH-----------
Q 048614           33 DALTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRC------------------IGE-SWPMTKERA-----------   81 (165)
Q Consensus        33 ~~~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~------------------~~~-~~~l~~~R~-----------   81 (165)
                      ++.+-+|++.+.+--|++....+| .|+||-=+|=++.                  .-+ .|.+++.-.           
T Consensus       126 ~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~E  205 (517)
T COG0661         126 SEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREE  205 (517)
T ss_pred             HHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHH
Confidence            356778999999999999999988 9999999997653                  111 133443222           


Q ss_pred             ---HHHHHHHHHhhccC---CC-CCceEEEEcCCCceEEEecCCCCchHHHHH-HH-cCCCCHHHHHHHHHHH
Q 048614           82 ---YFEALALKEHGQLC---PD-HVPEVYHFDRTMSLIGMRYLEPPHIILRKG-LI-AGIKYPLLAEHMSEFM  145 (165)
Q Consensus        82 ---~~E~~~L~~~~~~~---p~-~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~-l~-~g~~~~~~a~~iG~~L  145 (165)
                         +.|+..+..+++..   |. .||+||--=-...+++|||+. +-+.-... +. +|.....+|+.+.+..
T Consensus       206 lDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~-Gi~i~d~~~l~~~g~d~k~ia~~~~~~f  277 (517)
T COG0661         206 LDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWID-GIKISDIAALKSAGIDRKELAELLVRAF  277 (517)
T ss_pred             hCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeC-CEecccHHHHHhcCCCHHHHHHHHHHHH
Confidence               34555666665543   22 799999544478999999998 33333222 22 2333235555554433

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=84.85  E-value=19  Score=29.15  Aligned_cols=100  Identities=17%  Similarity=0.119  Sum_probs=60.3

Q ss_pred             EecCCCceeEEEEEEeC---CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-c--CCCc
Q 048614           38 KEVGDGNLNFVYIVVGS---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-D--RTMS  110 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D--~~~~  110 (165)
                      ..+|.|....||++...   .+ .+.+|+....      ..   ......|.++|+.+..  |..+.-.-.| +  ....
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~------~~---~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~   75 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT------GI---SMSACREIALLRELKH--PNVISLQKVFLSHADRKV   75 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCC------CC---cHHHHHHHHHHHhcCC--CCCcceeeeEecCCCcEE
Confidence            56899999999999854   23 6888875421      11   1345678888887753  4433322222 1  2335


Q ss_pred             eEEEecCCCCchHHHHHHHcC---------CCC-----HHHHHHHHHHHHHHHhc
Q 048614          111 LIGMRYLEPPHIILRKGLIAG---------IKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g---------~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      .++||+.+.   .+...+...         ...     -.++.+|...|.-+|..
T Consensus        76 ~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~  127 (317)
T cd07868          76 WLLFDYAEH---DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN  127 (317)
T ss_pred             EEEEeccCC---CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            688999873   333333211         111     24678888899988865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG4720 consensus Ethanolamine kinase [Lipid transport and metabolism]

Probab=84.43  E-value=4.1  Score=35.43  Aligned_cols=102  Identities=18%  Similarity=0.230  Sum_probs=66.1

Q ss_pred             CCCcceeEecCCCceeEEEEEEeCCC---eEEEeecCccccccCC--CCCCChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 048614           31 KFDALTIKEVGDGNLNFVYIVVGSSG---SFVIKQALPYVRCIGE--SWPMTKERAYFEALALKEHGQLCPDHVPEVYHF  105 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rv~~~~g---svIvKqa~p~~r~~~~--~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  105 (165)
                      +..+++.+..+||-.|-++-+.....   +|+|       |+.|+  +.-++.++-..   ..+.+++  -+..|++|  
T Consensus        80 ~~~~v~~~~fs~gitNkL~~~~vg~~~e~~v~v-------rvyg~~te~vIdre~Ev~---afk~L~a--~G~ap~Ly--  145 (391)
T KOG4720|consen   80 KPPEVTFKRFSDGITNKLFSCYVGENMEDHVLV-------RVYGHNTELVIDRENEVI---AFKLLAA--YGFAPKLY--  145 (391)
T ss_pred             CccceeeeeeccchhHHHHHhhcccccceeEEE-------EeccCCCceeeccHHHHH---HHHHHHH--cCcChhhh--
Confidence            45678888999999998877665432   3433       33333  23455554433   3333333  25678887  


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~  151 (165)
                      -.=++-+|.||+.  ++.|--   +....|.+...|++-||++|.-
T Consensus       146 ~tF~NGLvyefi~--g~tL~p---~~mr~pki~~lIAr~mak~H~~  186 (391)
T KOG4720|consen  146 GTFNNGLVYEFIQ--GKTLEP---EHMREPKIFRLIARRMAKIHSI  186 (391)
T ss_pred             heecCceEEeeec--CcccCh---hhccChHHHHHHHHHHHHhhee
Confidence            4558899999998  445533   2234688999999999999964

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=83.68  E-value=6.8  Score=35.92  Aligned_cols=103  Identities=17%  Similarity=0.161  Sum_probs=58.6

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-C----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-----
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-S----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP-----  100 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-----  100 (165)
                      +++ -...||.|..-.||++.+. +    + .++||+...+..              .|......+...++..+.     
T Consensus       132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--------------~e~~~~e~l~~~~~~~~~~~~~~  197 (566)
T PLN03225        132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--------------VEIWMNERVRRACPNSCADFVYG  197 (566)
T ss_pred             CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--------------hHHHHHHHHHhhchhhHHHHHHh
Confidence            445 4577999999999999875 3    4 899998653321              111111111111111100     


Q ss_pred             ---eEEEEcCCCceEEEecCCCCchHHHHHHHcCCC-------------------------CHHHHHHHHHHHHHHHhc
Q 048614          101 ---EVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIK-------------------------YPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       101 ---~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~-------------------------~~~~a~~iG~~La~~h~~  151 (165)
                         ..-.-+.....+||||.+  ...|.+.+.....                         ...++.+|...|..+|..
T Consensus       198 ~~~~~~~~~~~~~~LV~ey~~--~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~  274 (566)
T PLN03225        198 FLEPVSSKKEDEYWLVWRYEG--ESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST  274 (566)
T ss_pred             hhcccccccCCceEEEEEecC--CCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC
Confidence               000235567889999997  3456555543221                         014677788888888865

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=82.99  E-value=13  Score=31.80  Aligned_cols=105  Identities=20%  Similarity=0.069  Sum_probs=72.5

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-CC--Cc
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-RT--MS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-~~--~~  110 (165)
                      ..+-+|.|..-.||...+.+ | -.-||+..-.     ..|.  .+=...|..+|+.+.  .|..|+..-.++ .+  ..
T Consensus        21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~-----~~~~--~~~l~~Ei~iL~~l~--~p~IV~~~G~~~~~~~~~~   91 (313)
T KOG0198|consen   21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELE-----DSPT--SESLEREIRILSRLN--HPNIVQYYGSSSSRENDEY   91 (313)
T ss_pred             hhccccCccceEEEEEEecCCCcceeeeeeecc-----cchh--HHHHHHHHHHHHhCC--CCCEEeeCCccccccCeee
Confidence            66778999999999999875 5 7888887633     1122  333566777888777  566666533312 23  48


Q ss_pred             eEEEecCCCCchHHHHHHHc-C-CCC----HHHHHHHHHHHHHHHhc
Q 048614          111 LIGMRYLEPPHIILRKGLIA-G-IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~-g-~~~----~~~a~~iG~~La~~h~~  151 (165)
                      -+.|||++  ..+|.+.+.+ | ...    ...+.+|.+-|+-+|..
T Consensus        92 ~i~mEy~~--~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~  136 (313)
T KOG0198|consen   92 NIFMEYAP--GGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK  136 (313)
T ss_pred             EeeeeccC--CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            89999998  3477776665 3 222    25889999999999944

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=82.65  E-value=18  Score=33.00  Aligned_cols=118  Identities=14%  Similarity=0.164  Sum_probs=62.5

Q ss_pred             Ccc-eeEecCCCceeEEEEEEe-----------------CCC-eEEEeecCccccccCCCC-------CCChHHHHHHHH
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVG-----------------SSG-SFVIKQALPYVRCIGESW-------PMTKERAYFEAL   86 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~-----------------~~g-svIvKqa~p~~r~~~~~~-------~l~~~R~~~E~~   86 (165)
                      ++. ..+.||.|..-.||+...                 ..+ .|+||+-...-.....++       .-..+....|..
T Consensus       145 d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~  224 (507)
T PLN03224        145 DDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAY  224 (507)
T ss_pred             cCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHH
Confidence            344 556789999999998753                 123 688887532110000000       112234445666


Q ss_pred             HHHHhhc--cCCCCCceEEEE----------cCCCceEEEecCCCCchHHHHHH---------------HcCCCC-----
Q 048614           87 ALKEHGQ--LCPDHVPEVYHF----------DRTMSLIGMRYLEPPHIILRKGL---------------IAGIKY-----  134 (165)
Q Consensus        87 ~L~~~~~--~~p~~vP~v~~~----------D~~~~~~vMEdL~~~~~~lr~~l---------------~~g~~~-----  134 (165)
                      .+..+..  +....+.+.+.|          +.....+||||.+.  .+|.+.|               ..|...     
T Consensus       225 ~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~--gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        225 MCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESD--ATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCC--CcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            5555433  222233333322          34567899999983  3443333               223211     


Q ss_pred             ---------HHHHHHHHHHHHHHHhcc
Q 048614          135 ---------PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       135 ---------~~~a~~iG~~La~~h~~t  152 (165)
                               -.++.++...|..+|...
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~  329 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIG  329 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                     135677788888888754

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=82.40  E-value=17  Score=35.50  Aligned_cols=109  Identities=19%  Similarity=0.143  Sum_probs=66.0

Q ss_pred             CCCcce-eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--
Q 048614           31 KFDALT-IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--  105 (165)
Q Consensus        31 ~~~~~~-v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--  105 (165)
                      +...++ ++.++-|+--.||++... +| -..||--.|-.-.       + +-...|+++|+...-.  -++++.|++  
T Consensus        17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-------d-eEiE~eynil~~~~~h--pnv~~fyg~~~   86 (953)
T KOG0587|consen   17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-------E-EEIELEYNMLKKYSHH--PNVATFYGAFI   86 (953)
T ss_pred             CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-------c-HHHHHHHHHHHhccCC--CCcceEEEEEE
Confidence            445564 556788999999999876 34 5666655544432       1 5788899999877553  245555554  


Q ss_pred             -----cCCCceEEEecCCCCc-hHHHHHHHcCCCC-----HHHHHHHHHHHHHHHh
Q 048614          106 -----DRTMSLIGMRYLEPPH-IILRKGLIAGIKY-----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       106 -----D~~~~~~vMEdL~~~~-~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~  150 (165)
                           ..+.--+|||+|+.+. +.|-.-+. |...     .-+...++.-|..+|.
T Consensus        87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~  141 (953)
T KOG0587|consen   87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHN  141 (953)
T ss_pred             EecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhh
Confidence                 3477789999999532 23434343 4322     2244444555555553

>KOG2686 consensus Choline kinase [Cell wall/membrane/envelope biogenesis]

Probab=82.20  E-value=5.3  Score=35.03  Aligned_cols=110  Identities=14%  Similarity=0.163  Sum_probs=75.0

Q ss_pred             CCCcceeEecCCCceeEEEEEEeCCC-eEEEeecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC
Q 048614           31 KFDALTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT  108 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~  108 (165)
                      ..+..+++.++||..|.+|.++.+.. ..|=++-.+.+ |+.|+.-.  ..-...|...+..++..  +.=|++|.+-++
T Consensus        39 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~LlRiyg~~~~--~~~~~~Esv~fa~lSer--~lGPkL~G~F~~  114 (366)
T KOG2686|consen   39 INEEQRLEVIPGGGSNLLFVVTSSASTTPIKDEPRKVLLRIYGQGVD--FSQRETESVMFAILSER--GLGPKLYGFFSG  114 (366)
T ss_pred             hhhhheeeeccCCCcceEEEEecCcccCCcccccceeEEEEecCCcc--HHHhhhHHHHHHHHhhc--CCCcceeeecCC
Confidence            34567999999999999999998876 44434444444 87665332  45556677777777663  456999988765


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~  151 (165)
                      --  +=||++  ...|..   +.-..|++...||.-|+..|..
T Consensus       115 GR--~Eefip--SRtL~~---~~i~~p~~S~~Ia~~~~~~H~~  150 (366)
T KOG2686|consen  115 GR--FEEFIP--SRTLTL---ADIRDPEISKRIAAKLAEYHGI  150 (366)
T ss_pred             cc--Hhhhcc--ccccch---HhhcchhHHHHHHHHHHHhcCC
Confidence            43  224444  445543   3346788999999999999964

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=81.99  E-value=22  Score=32.09  Aligned_cols=111  Identities=19%  Similarity=0.159  Sum_probs=66.2

Q ss_pred             ceeEecCCCceeEEEEEEeC-CC-eEEEeecCccc--cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCC
Q 048614           35 LTIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYV--RCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DRTM  109 (165)
Q Consensus        35 ~~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~--r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~~~  109 (165)
                      +--+.+|-|-.-.|-.+-.. +| .|-||+--..-  .+. + -.....+...|.++|+.++-  |..|---=+| +++.
T Consensus       175 ii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s-~-~~~~~~~v~~EieILkkL~H--P~IV~~~d~f~~~ds  250 (475)
T KOG0615|consen  175 IISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCS-R-AIAKTRDVQNEIEILKKLSH--PNIVRIKDFFEVPDS  250 (475)
T ss_pred             EeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhccccc-c-cccchhhhHHHHHHHHhcCC--CCEEEEeeeeecCCc
Confidence            46677888888777666544 45 78888754332  211 1 13344556899999988766  4433222233 4455


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~  151 (165)
                      .-+||||.+ ++. |-+.+.+.+ ..    ..+..|+-+.+--+|..
T Consensus       251 ~YmVlE~v~-GGe-Lfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~  295 (475)
T KOG0615|consen  251 SYMVLEYVE-GGE-LFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ  295 (475)
T ss_pred             eEEEEEEec-Ccc-HHHHHHhccccccchhHHHHHHHHHHHHHHHHc
Confidence            599999998 454 445454433 22    34566666666666654

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=80.05  E-value=12  Score=32.40  Aligned_cols=107  Identities=14%  Similarity=0.094  Sum_probs=71.6

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC---
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT---  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~---  108 (165)
                      .++.+|+|.--.||++... .| -|.+|..+-.-..  +.   .++=...|..+|+.++.-++  +-.++.  ++..   
T Consensus        15 ~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~--EG---~P~taiREisllk~L~~~~~--iv~L~dv~~~~~~~~   87 (323)
T KOG0594|consen   15 KVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE--EG---VPSTAIREISLLKRLSHANH--IVRLHDVIHTSNNHR   87 (323)
T ss_pred             HHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc--cC---CCchhhHHHHHHHHhCCCcc--eEEEEeeeeeccccc
Confidence            5677999999999999875 45 6778876533321  22   23455779999999988654  222222  1222   


Q ss_pred             ---CceEEEecCCCCchHHHHHHHcCC-----C----CHHHHHHHHHHHHHHHhcc
Q 048614          109 ---MSLIGMRYLEPPHIILRKGLIAGI-----K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ---~~~~vMEdL~~~~~~lr~~l~~g~-----~----~~~~a~~iG~~La~~h~~t  152 (165)
                         .-.+|||++.   ..|++.+....     .    ...+..||-..|+-.|...
T Consensus        88 ~~~~l~lvfe~~d---~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~  140 (323)
T KOG0594|consen   88 GIGKLYLVFEFLD---RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG  140 (323)
T ss_pred             ccceEEEEEEeec---ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence               4458999997   47777777633     1    2367788888888888754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	165
2pyw_A	420	Structure Of A. Thaliana 5-Methylthioribose Kinase		9e-77
2olc_A	397	Crystal Structure Of 5-Methylthioribose Kinase In C		4e-25

>pdb|2PYW|A Chain A, Structure Of A. Thaliana 5-Methylthioribose Kinase In Complex With Adp And Mtr Length = 420

Iteration: 1
 Score =  281 bits (720), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 131/166 (78%), Positives = 149/166 (89%), Gaps = 2/166 (1%)
Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIG--NKFDALTIKEVGDGNLNFVYIVVGSSGSF 58
           M+F EF PL++KSL++YIK+TP+LSSKIG     D L IKEVGDGNLNFV+IVVGSSGS 
Sbjct: 1   MSFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSL 60
Query: 59  VIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLE 118
           VIKQALPY+RCIGESWPMTKERAYFEA  L++HG L PDHVPEVYHFDRTM+LIGMRYLE
Sbjct: 61  VIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLE 120
Query: 119 PPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
           PPHIILRKGLIAGI+YP LA+HMS++MAKTLF+TSLLY  TTEH+R
Sbjct: 121 PPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRR 166

>pdb|2OLC|A Chain A, Crystal Structure Of 5-Methylthioribose Kinase In Complex With Adp-2ho Length = 397

Iteration: 1
 Score =  110 bits (274), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 80/122 (65%), Gaps = 5/122 (4%)
Query: 35  LTIKEVGDGNLNFVYIVVGS--SGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHG 92
           LT +E+GDGNLN+V+ +       + +IKQA+PY + +GESWP+T +RA  E+ AL   G
Sbjct: 33  LTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQG 92
Query: 93  QLCPDHVPEVYHFDRTMSLIGMRYLEPPHI-ILRKGLIAGIKYPLLAEHMSEFMAKTLFY 151
           +  P  VP V++ D  M++  M  L   H+ I RKGLI G  YP L++H+ EF+ KTLFY
Sbjct: 93  EHVPHLVPRVFYSDTEMAVTVMEDL--SHLKIARKGLIEGENYPHLSQHIGEFLGKTLFY 150
Query: 152 TS 153
           +S
Sbjct: 151 SS 152

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	165
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	2e-52
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	4e-45
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	5e-05

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} Length = 420

 Score =  171 bits (433), Expect = 2e-52
 Identities = 131/166 (78%), Positives = 149/166 (89%), Gaps = 2/166 (1%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIG--NKFDALTIKEVGDGNLNFVYIVVGSSGSF 58
           M+F EF PL++KSL++YIK+TP+LSSKIG     D L IKEVGDGNLNFV+IVVGSSGS 
Sbjct: 1   MSFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSL 60

Query: 59  VIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLE 118
           VIKQALPY+RCIGESWPMTKERAYFEA  L++HG L PDHVPEVYHFDRTM+LIGMRYLE
Sbjct: 61  VIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLE 120

Query: 119 PPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
           PPHIILRKGLIAGI+YP LA+HMS++MAKTLF+TSLLY  TTEH+R
Sbjct: 121 PPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRR 166

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* Length = 397

 Score =  151 bits (382), Expect = 4e-45
 Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 8/165 (4%)

Query: 3   FTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG--SFVI 60
              +  L++ S +          SK       LT +E+GDGNLN+V+ +       + +I
Sbjct: 6   TPLYETLNESSAVALAVKLGLFPSK-----STLTCQEIGDGNLNYVFHIYDQEHDRALII 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQA+PY + +GESWP+T +RA  E+ AL   G+  P  VP V++ D  M++  M  L   
Sbjct: 61  KQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDL-SH 119

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
             I RKGLI G  YP L++H+ EF+ KTLFY+S         K+ 
Sbjct: 120 LKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQL 164

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} Length = 312

 Score = 41.3 bits (96), Expect = 5e-05
 Identities = 12/85 (14%), Positives = 29/85 (34%), Gaps = 10/85 (11%)

Query: 24  LSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYF 83
           L+ + G  +     +++  G +N ++++     +  +K                +     
Sbjct: 28  LAEQFGAYYFIKHKEKLYSGEMNEIWLINDEVQTVFVKIN----------ERSYRSMFRA 77

Query: 84  EALALKEHGQLCPDHVPEVYHFDRT 108
           EA  L    +    +VP VY    +
Sbjct: 78  EADQLALLAKTNSINVPLVYGIGNS 102

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	165
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	99.93
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	99.93
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	99.22
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	99.19
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	99.16
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	99.1
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.09
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	98.96
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.96
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.94
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.89
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.89
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.85
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.85
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	98.78
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.78
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	98.72
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.72
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.67
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	98.56
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	98.55
3mes_A	424	Choline kinase; malaria, structural genomics, stru	98.54
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	98.51
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	98.49
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	98.4
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	98.29
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	97.99
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.72
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	97.62
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	97.42
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	97.38
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	97.38
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	97.33
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	97.31
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	97.29
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	97.23
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	97.22
3bhy_A	283	Death-associated protein kinase 3; death associate	97.17
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	97.15
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	97.13
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	97.09
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	97.09
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	97.09
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	97.05
3uqc_A	286	Probable conserved transmembrane protein; structur	97.04
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	97.04
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	97.03
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	97.01
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	96.99
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	96.97
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	96.95
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	96.94
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	96.93
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	96.93
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	96.9
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	96.89
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	96.89
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	96.88
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	96.88
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	96.87
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	96.86
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	96.85
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	96.85
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	96.85
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	96.84
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	96.82
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	96.81
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	96.8
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	96.8
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	96.79
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	96.78
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	96.78
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	96.78
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	96.77
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	96.77
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	96.75
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	96.75
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	96.74
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	96.74
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	96.74
3niz_A	311	Rhodanese family protein; structural genomics, str	96.73
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	96.72
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	96.72
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	96.71
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	96.71
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	96.7
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	96.69
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	96.68
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	96.66
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	96.66
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	96.65
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	96.64
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	96.63
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	96.62
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	96.62
4aoj_A	329	High affinity nerve growth factor receptor; transf	96.61
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	96.6
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	96.6
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	96.6
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	96.59
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	96.59
3q4u_A	301	Activin receptor type-1; structural genomics conso	96.58
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	96.57
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	96.55
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	96.55
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	96.54
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	96.52
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	96.52
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	96.52
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	96.51
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	96.5
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	96.5
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	96.49
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	96.48
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	96.47
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	96.46
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	96.45
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	96.43
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	96.43
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	96.42
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	96.41
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	96.41
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	96.39
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	96.39
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	96.39
3o0g_A	292	Cell division protein kinase 5; kinase activator c	96.39
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	96.37
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	96.37
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	96.37
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	96.37
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	96.37
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	96.36
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	96.35
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	96.34
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	96.34
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	96.33
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	96.33
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	96.33
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	96.32
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	96.31
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	96.31
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	96.3
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	96.3
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	96.29
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	96.29
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	96.29
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	96.28
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	96.28
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	96.28
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	96.26
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	96.25
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	96.25
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	96.25
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	96.25
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	96.23
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	96.22
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	96.22
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	96.22
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	96.22
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	96.21
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	96.2
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	96.18
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	96.17
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	96.16
3soc_A	322	Activin receptor type-2A; structural genomics cons	96.15
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	96.15
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	96.14
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	96.13
3an0_A	340	Dual specificity mitogen-activated protein kinase;	96.12
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	96.12
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	96.11
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	96.09
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	96.09
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	96.08
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	96.08
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	96.08
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	96.07
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	96.07
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	96.06
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	96.06
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	96.05
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	96.05
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	96.05
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	96.04
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	96.03
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	96.02
3fme_A	290	Dual specificity mitogen-activated protein kinase;	96.01
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	95.99
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	95.98
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	95.97
3ork_A	311	Serine/threonine protein kinase; structural genomi	95.96
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	95.96
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	95.96
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	95.94
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	95.93
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	95.92
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	95.91
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	95.89
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	95.86
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	95.84
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	95.83
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	95.83
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	95.82
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	95.81
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	95.78
2a19_B	284	Interferon-induced, double-stranded RNA-activated	95.78
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	95.77
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	95.77
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	95.74
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	95.74
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	95.73
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	95.7
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	95.69
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	95.67
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	95.66
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	95.66
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	95.65
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	95.64
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	95.63
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	95.63
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	95.6
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	95.59
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	95.59
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	95.56
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	95.54
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	95.54
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	95.54
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	95.53
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	95.53
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	95.53
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	95.52
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	95.52
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	95.46
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	95.44
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	95.44
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	95.43
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	95.36
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	95.35
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	95.35
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	95.32
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	95.28
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	95.27
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	95.26
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	95.22
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	95.21
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	95.19
2dyl_A	318	Dual specificity mitogen-activated protein kinase	95.15
3pls_A	298	Macrophage-stimulating protein receptor; protein k	95.14
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	95.12
3rp9_A	458	Mitogen-activated protein kinase; structural genom	95.12
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	95.06
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	94.99
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	94.98
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	94.93
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	94.93
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	94.92
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	94.91
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	94.85
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	94.82
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	94.81
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	94.72
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	94.63
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	94.6
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	94.48
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	94.45
3aln_A	327	Dual specificity mitogen-activated protein kinase;	94.29
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	94.24
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	94.2
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	94.2
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	94.17
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	93.93
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	93.75
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	93.66
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	93.52
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	93.21
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	93.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	92.8
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	92.69
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	92.24
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	91.74
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	91.5

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=99.93  E-value=1.5e-25  Score=189.99  Aligned_cols=152  Identities=38%  Similarity=0.628  Sum_probs=127.4

Q ss_pred             CCCccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeC-C-CeEEEeecCccccccCCCCCCChHH
Q 048614            3 FTEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGS-S-GSFVIKQALPYVRCIGESWPMTKER   80 (165)
Q Consensus         3 ~~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~-~-gsvIvKqa~p~~r~~~~~~~l~~~R   80 (165)
                      ++.|+.|+.++|.+||+..+.++     +.+.++++++|+|++|.||||+.. + +++||||+.|+.|+.+++|+++.+|
T Consensus         6 ~~~~~~l~~~~v~~~l~~~~~~~-----~~~~~~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r   80 (397)
T 2olc_A            6 TPLYETLNESSAVALAVKLGLFP-----SKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDR   80 (397)
T ss_dssp             CCCCCCCCHHHHHHHHHHTTC----------CCEEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTH
T ss_pred             CcccccCCHHHHHHHHHhcCcCC-----CCCceEEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHH
Confidence            45899999999999999766442     344589999999999999999754 2 3999999999998556899999999


Q ss_pred             HHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCch
Q 048614           81 AYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTT  160 (165)
Q Consensus        81 ~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~  160 (165)
                      ...|+++|+.+++.+|..+|++|++|++..++|||||+ ++..|+..+.+|...+..++++|++||++|+.|+++.++..
T Consensus        81 ~~~E~~~L~~l~~~~~~~vP~~~~~d~~~~~lvmE~l~-g~~~~~~~l~~~~~~~~~~~~l~~~La~lH~~~~~~~~~~~  159 (397)
T 2olc_A           81 ARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDLS-HLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPK  159 (397)
T ss_dssp             HHHHHHHHHHHHTTCGGGSCCEEEEETTTTEEEECCCT-TSEEHHHHHHTTCCCTTHHHHHHHHHHHHHHHTSTTTSCHH
T ss_pred             HHHHHHHHHHhhhhCCCCcCeEEEEcCCccEEEEEeCC-CcchHHHHHhcCCcCHHHHHHHHHHHHHHhhhcccccCChH
Confidence            99999999999998889999999999999999999998 68889999998888889999999999999999999888765

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=99.93  E-value=1.6e-25  Score=192.00  Aligned_cols=154  Identities=78%  Similarity=1.310  Sum_probs=133.8

Q ss_pred             CCCCCccccCHhhHHHHHH---hCC-CcccccCCCC---CcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCC
Q 048614            1 MAFTEFRPLDDKSLLEYIK---ATP-SLSSKIGNKF---DALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGES   73 (165)
Q Consensus         1 ~~~~~~~~l~~~~v~~Yl~---~~~-~~~~~~~~~~---~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~   73 (165)
                      |.++.|+.||+++|.+|++   ..+ .+    + ..   +.++++++++|+.|.||||.++++++||||++|+.++.+++
T Consensus         1 ~~~~~~~~l~~~~~~~yl~~~~~~~~~~----~-~~~~~~~~~i~~l~~G~~n~vyrv~~~~~~~vvK~~~p~~~~~~~~   75 (420)
T 2pyw_A            1 MSFEEFTPLNEKSLVDYIKSTPALSSKI----G-ADKSDDDLVIKEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGES   75 (420)
T ss_dssp             --CCSCCCCCTTHHHHHHHTCHHHHHHH----T-TTTCCCCCEEEECCCSSSCEEEEEECSSCEEEEEECCSBCTTTCTT
T ss_pred             CCccccccCChhhHHHHHhchhhhhhhc----C-CcccccceEEEEccCCCcEEEEEEEcCCceEEEEECchhhcccCcc
Confidence            6789999999999999999   332 22    1 33   46899999999999999998765599999999999944688


Q ss_pred             CCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecC-CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614           74 WPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYL-EPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        74 ~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL-~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      |+++.+|..+|++++.......|..+|++|++|++...+||||+ + ++..|+..+.+|...+..++++|++||++|+.+
T Consensus        76 ~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~~~~~~lv~e~l~~-g~~~l~~~l~~~~~~~~~~~~lg~~La~lH~~~  154 (420)
T 2pyw_A           76 WPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLEP-PHIILRKGLIAGIEYPFLADHMSDYMAKTLFFT  154 (420)
T ss_dssp             SBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEETTTTEEEECCCCT-TCEEHHHHHHHTCCCTTHHHHHHHHHHHHHHTT
T ss_pred             cccchhHHHHHHHHHHHHHhhCCCCCCeEEEECCCccEEEEeecCC-cchhHHHHHhcCCCCHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999988888899999999999999999999 8 578999999988888889999999999999999


Q ss_pred             cccccCch
Q 048614          153 SLLYRTTT  160 (165)
Q Consensus       153 sd~~l~~~  160 (165)
                      +++.++++
T Consensus       155 ~~~~~~~~  162 (420)
T 2pyw_A          155 SLLYHDTT  162 (420)
T ss_dssp             STTTSCHH
T ss_pred             cccccChh
Confidence            98877543

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=99.22  E-value=6.5e-11  Score=97.50  Aligned_cols=122  Identities=7%  Similarity=-0.012  Sum_probs=86.6

Q ss_pred             HhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeE-EEEEEeC-CCeEEEeecCccccccCCCCCCChHHHHHHHHHH
Q 048614           11 DKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNF-VYIVVGS-SGSFVIKQALPYVRCIGESWPMTKERAYFEALAL   88 (165)
Q Consensus        11 ~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~-v~rv~~~-~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L   88 (165)
                      .+.+..||...++         ...++++++||.+|. +||++.. ++++|+|++.|...          ++...|++++
T Consensus         6 ~~~l~~~l~~~~~---------~~~~~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~----------~~~~~e~~~l   66 (333)
T 3csv_A            6 EDEIRDFLATHGY---------ADWNRTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG----------GDTQPFVDLA   66 (333)
T ss_dssp             HHHHHHHHHHTTC---------TTCEECC--------CCEEEECTTCCEEEEEECCTTTT----------CCSHHHHHHH
T ss_pred             HHHHHHHHHhcCC---------CCceeeECCCCCCCceEEEEEcCCCCeEEEEECCCCCC----------ccccHHHHHH
Confidence            3568889987642         346899999999997 7899875 44999999887421          4567799999


Q ss_pred             HHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCC-HHHHHHHHHHHHHHHhcccc
Q 048614           89 KEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKY-PLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus        89 ~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~-~~~a~~iG~~La~~h~~tsd  154 (165)
                      +.+++. +..||+++.+|.++..++|||++ + ..+...+...... +..++++|+.||++|..+..
T Consensus        67 ~~L~~~-g~~vP~v~~~d~~~g~ll~e~l~-~-~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~  130 (333)
T 3csv_A           67 QYLRNL-DISAPEIYAEEHARGLLLIEDLG-D-ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTP  130 (333)
T ss_dssp             HHHHHT-TCBCCCEEEEETTTTEEEECCCC-S-CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCC
T ss_pred             HHHHhC-CCCCCceeeecCCCCEEEEeeCC-C-cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCc
Confidence            999876 56699999999998999999998 3 4555555433222 57889999999999998765

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=99.19  E-value=1.3e-10  Score=96.95  Aligned_cols=127  Identities=13%  Similarity=0.029  Sum_probs=98.9

Q ss_pred             CccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHH
Q 048614            5 EFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFE   84 (165)
Q Consensus         5 ~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E   84 (165)
                      -|+....+.+..+|.+.      ++.+..-.++++++||.+|.+|+|+++++++|||...+-          +..+...|
T Consensus        15 ~~~~~~~~~l~~~L~~~------lg~~~~i~~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~----------~~~~~~~E   78 (312)
T 3jr1_A           15 LYFQGMWKSISQVLAEQ------FGAYYFIKHKEKLYSGEMNEIWLINDEVQTVFVKINERS----------YRSMFRAE   78 (312)
T ss_dssp             HHHHHHHHHHHHHHHHH------HSSCCCCCEEEEECCSSSSEEEEEESSSCEEEEEEEEGG----------GHHHHHHH
T ss_pred             hhhhccHHHHHHHHHHH------hCCCcceeeeEEeCCccceeeeEEEECCCeEEEEeCCcc----------cHHHHHHH
Confidence            36666778888888864      122224458999999999999999987669999987632          24678999


Q ss_pred             HHHHHHhhccCCCCCceEEEEcC--CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc--ccccC
Q 048614           85 ALALKEHGQLCPDHVPEVYHFDR--TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS--LLYRT  158 (165)
Q Consensus        85 ~~~L~~~~~~~p~~vP~v~~~D~--~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts--d~~l~  158 (165)
                      +++|+.++...+..||+++.++.  ....+|||+++. . .+         .+..++++|+.||++|..+.  .|+.+
T Consensus        79 ~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G-~-~~---------~~~~~~~lG~~LA~LH~~~~~~~fG~~  145 (312)
T 3jr1_A           79 ADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK-S-KN---------KQSSFTIFAEKIAQLHQIQGPDKYGLD  145 (312)
T ss_dssp             HHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC-C-CC---------CTTHHHHHHHHHHHHHHCCCCSSBBCS
T ss_pred             HHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC-C-CC---------CchhHHHHHHHHHHHHcCCCCCCCCCC
Confidence            99999999877889999998865  468899999984 2 21         13578999999999999875  56554

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=99.16  E-value=4.3e-10  Score=91.08  Aligned_cols=100  Identities=21%  Similarity=0.232  Sum_probs=81.4

Q ss_pred             ceeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEE
Q 048614           35 LTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIG  113 (165)
Q Consensus        35 ~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~v  113 (165)
                      .+++++|+|..|.||||++.+| +++||...+-.       +........|++.|+.+++..+..||+++.+|.  ..++
T Consensus        18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~-------~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~--~~lv   88 (288)
T 3f7w_A           18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDA-------PALDGLFRAEALGLDWLGRSFGSPVPQVAGWDD--RTLA   88 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-------CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEET--TEEE
T ss_pred             EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC-------cchhhHHHHHHHHHHHHHhhCCCCcceEEeccC--ceEE
Confidence            4899999999999999999988 89999876432       122345678999999999888889999999875  5889


Q ss_pred             EecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 048614          114 MRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd  154 (165)
                      ||++.. .          ...+..++++|..||++|..+.+
T Consensus        89 ~e~l~~-~----------~~~~~~~~~lg~~La~lH~~~~~  118 (288)
T 3f7w_A           89 MEWVDE-R----------PPTPEAAERFGHQLAAMHLAGAE  118 (288)
T ss_dssp             EECCCC-C----------CCCHHHHHHHHHHHHHHHHTCCS
T ss_pred             EEeecc-c----------CCChHHHHHHHHHHHhhhhcccc
Confidence            999973 2          23456788999999999988754

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.09  E-value=5.7e-10  Score=92.73  Aligned_cols=131  Identities=11%  Similarity=0.165  Sum_probs=92.1

Q ss_pred             cccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecC--ccccccCCCCCCChHHHHHH
Q 048614            7 RPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQAL--PYVRCIGESWPMTKERAYFE   84 (165)
Q Consensus         7 ~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~--p~~r~~~~~~~l~~~R~~~E   84 (165)
                      ..++.+.+..||.++.      ......++++++++|.+|.||+++..++++|||...  +-...      -+..+...|
T Consensus        19 ~~ld~~~l~~~l~~~~------~~~~~~~~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~------~~~~~~~~E   86 (359)
T 3dxp_A           19 QRFDTEALEAWMRQHV------EGFAGPLSVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLL------PSAHAIERE   86 (359)
T ss_dssp             -CCCHHHHHHHHHHHS------TTCCCCCEEEECCC-CCSCEEEEECSSCEEEEECCCC----------------CHHHH
T ss_pred             cCCCHHHHHHHHHHhC------CCCCCCceEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCC------CcHHHHHHH
Confidence            4678899999999752      112346799999999999999999887799999886  43211      123577889


Q ss_pred             HHHHHHhhccCCCCCceEEEEcCCC-----ceEEEecCCCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHhcc
Q 048614           85 ALALKEHGQLCPDHVPEVYHFDRTM-----SLIGMRYLEPPHIILRKGLIAGI---KYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        85 ~~~L~~~~~~~p~~vP~v~~~D~~~-----~~~vMEdL~~~~~~lr~~l~~g~---~~~~~a~~iG~~La~~h~~t  152 (165)
                      +++|+.+.+ .+..||+++.++.+.     ..+|||+++.  ..+.+....+-   ....++.++|+.||++|..+
T Consensus        87 ~~~l~~L~~-~~vpvP~~~~~~~~~~~~g~~~~vme~v~G--~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~  159 (359)
T 3dxp_A           87 YRVMDALAG-TDVPVAKMYALCEDESVIGRAFYIMEFVSG--RVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVD  159 (359)
T ss_dssp             HHHHHHHTT-SSSCCCCEEEEECCTTTTSSCEEEEECCCC--BCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHhhc-CCCCCCcEEEECCCCCccCCeEEEEEecCC--eecCCCccccCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            999999987 345699999998877     5699999983  33322111111   12357899999999999865

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=98.96  E-value=7.4e-09  Score=84.33  Aligned_cols=129  Identities=9%  Similarity=0.044  Sum_probs=91.1

Q ss_pred             CCccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHH
Q 048614            4 TEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYF   83 (165)
Q Consensus         4 ~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~   83 (165)
                      .-|..++.+.+.++|..-+       . .+..+++++++|..|.+|+|+..+|++|+|...+.         .+.++...
T Consensus         2 ~v~~~~~~~~l~~~l~~~~-------~-~~~~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~---------~~~~~l~~   64 (322)
T 2ppq_A            2 AVYTDITEDELRNFLTQYD-------V-GSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKR---------VEKNDLPF   64 (322)
T ss_dssp             ---CCCCHHHHHHHHTTBC-------C-CCEEEEEEECC---EEEEEEEESSCCEEEEEECC------------CCHHHH
T ss_pred             CccccCCHHHHHHHHHhCC-------C-CcceEeeccCCCcccceEEEEeCCccEEEEEeCCC---------CCHHHHHH
Confidence            3588899999999997522       1 22358999999999999999988789999998753         12357778


Q ss_pred             HHHHHHHhhccCCCCCceEEEEcC--------CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 048614           84 EALALKEHGQLCPDHVPEVYHFDR--------TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus        84 E~~~L~~~~~~~p~~vP~v~~~D~--------~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      |.++|+.+++. .-.||+++..+.        ....++||++++ . .+.      ...+..+.++|+.||++|..+.+|
T Consensus        65 e~~~l~~L~~~-g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~G-~-~~~------~~~~~~~~~~g~~La~lH~~~~~~  135 (322)
T 2ppq_A           65 FLGLMQHLAAK-GLSCPLPLPRKDGELLGELSGRPAALISFLEG-M-WLR------KPEAKHCREVGKALAAMHLASEGF  135 (322)
T ss_dssp             HHHHHHHHHHT-TCCCCCBCCBTTCCSCEEETTEEEEEEECCCC-B-CCS------SCCHHHHHHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHC-CCCCCcccCCCCCCEEEEECCEEEEEEEeCCC-c-CCC------CCCHHHHHHHHHHHHHHHHHhccC
Confidence            99999998774 233777775432        345789999983 3 221      134788999999999999998877


Q ss_pred             ccC
Q 048614          156 YRT  158 (165)
Q Consensus       156 ~l~  158 (165)
                      ..+
T Consensus       136 ~~~  138 (322)
T 2ppq_A          136 EIK  138 (322)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            654

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.96  E-value=9.2e-10  Score=91.10  Aligned_cols=132  Identities=14%  Similarity=0.099  Sum_probs=90.0

Q ss_pred             HhhHHHHHHhCCCcccccCCCCCcc-eeEec-CCCceeEEEEEEeC--------CCeEEEeecCccccccCCCCCCChHH
Q 048614           11 DKSLLEYIKATPSLSSKIGNKFDAL-TIKEV-GDGNLNFVYIVVGS--------SGSFVIKQALPYVRCIGESWPMTKER   80 (165)
Q Consensus        11 ~~~v~~Yl~~~~~~~~~~~~~~~~~-~v~~l-~~Gn~N~v~rv~~~--------~gsvIvKqa~p~~r~~~~~~~l~~~R   80 (165)
                      .+.+..||.++..     +.....+ +++.+ ++|..|.+|+|+..        ++++|+|...+-...  +  ..+..+
T Consensus         3 ~~~l~~~l~~~~~-----~~~~~~v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~--~--~~~~~~   73 (357)
T 3ats_A            3 PAVISRWLSSVLP-----GGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDV--P--VFPTYR   73 (357)
T ss_dssp             HHHHHHHHHHHSC-----TTCCCEEEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGC--C--SSSCCC
T ss_pred             HHHHHHHHHHhcC-----CcCCCceEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCcc--c--cCchhH
Confidence            4678889987521     0011123 67888 99999999999875        338999987653310  0  112367


Q ss_pred             HHHHHHHHHHhhccCCCCCceEEEEcCCCc-----eEEEecCCCCchHHHHHH----HcC---CCC----HHHHHHHHHH
Q 048614           81 AYFEALALKEHGQLCPDHVPEVYHFDRTMS-----LIGMRYLEPPHIILRKGL----IAG---IKY----PLLAEHMSEF  144 (165)
Q Consensus        81 ~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~-----~~vMEdL~~~~~~lr~~l----~~g---~~~----~~~a~~iG~~  144 (165)
                      ...|+++|+.+++..+..||+++.++.+..     .+|||++++  ..+.+.+    .++   ...    ..+++++|+.
T Consensus        74 ~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  151 (357)
T 3ats_A           74 LDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEG--VVPPDVMPYTFGDNWFADAPAERQRQLQDATVAA  151 (357)
T ss_dssp             HHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCC--BCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCC--CChhhcCcccccccccCCCCHHHHHHHHHHHHHH
Confidence            889999999998875667999999987763     589999983  3332211    000   111    3578999999


Q ss_pred             HHHHHhccc
Q 048614          145 MAKTLFYTS  153 (165)
Q Consensus       145 La~~h~~ts  153 (165)
                      |+++|..+.
T Consensus       152 La~LH~~~~  160 (357)
T 3ats_A          152 LATLHSIPN  160 (357)
T ss_dssp             HHHHTTCSS
T ss_pred             HHHHhCCCC
Confidence            999998764

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.94  E-value=6.9e-09  Score=80.84  Aligned_cols=105  Identities=10%  Similarity=-0.061  Sum_probs=79.8

Q ss_pred             CCcceeEecC-CCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-
Q 048614           32 FDALTIKEVG-DGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT-  108 (165)
Q Consensus        32 ~~~~~v~~l~-~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~-  108 (165)
                      .....+++++ ||..|.||++...+| ++|||...+.          ...+...|+++|+.++.. +..+|+++.++.+ 
T Consensus        19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~----------~~~~~~~E~~~l~~l~~~-~~~vP~~~~~~~~~   87 (264)
T 1nd4_A           19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG----------ALNELQDEAARLSWLATT-GVPCAAVLDVVTEA   87 (264)
T ss_dssp             TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC----------TTSCHHHHHHHHHHHHTT-TCCBCCEEEEEECS
T ss_pred             cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc----------cchhhhHHHHHHHHHHhC-CCCCCeEEEeccCC
Confidence            3456788886 778899999998766 7999996532          125678999999999876 5569999988766 


Q ss_pred             -CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          109 -MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 -~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                       ...+|||+++  +..+.   ........++.++|.+|+++|..+
T Consensus        88 ~~~~~v~e~i~--G~~l~---~~~~~~~~~~~~l~~~l~~lh~~~  127 (264)
T 1nd4_A           88 GRDWLLLGEVP--GQDLL---SSHLAPAEKVSIMADAMRRLHTLD  127 (264)
T ss_dssp             SCEEEEEECCS--SEETT---TSCCCHHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEEecC--CcccC---cCcCCHhHHHHHHHHHHHHHhCCC
Confidence             4599999998  34452   122222478999999999999876

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.89  E-value=1.4e-08  Score=80.44  Aligned_cols=105  Identities=12%  Similarity=0.102  Sum_probs=80.0

Q ss_pred             cceeEecCCCcee-EEEEEEeCCC--eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC
Q 048614           34 ALTIKEVGDGNLN-FVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT  108 (165)
Q Consensus        34 ~~~v~~l~~Gn~N-~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~  108 (165)
                      ..+.+.+++|.+| .|||+.+..+  +++||...+-.          ......|++.|+.++..+|  ||+++.+  |.+
T Consensus        26 g~~~~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~----------~~~~~~E~~~l~~l~~~vP--VP~v~~~~~~~~   93 (272)
T 4gkh_A           26 GYRWARDNVGQSGATIYRLYGKPNAPELFLKHGKGSV----------ANDVTDEMVRLNWLTAFMP--LPTIKHFIRTPD   93 (272)
T ss_dssp             TCEEEEEECSSSSCEEEEEECCTTCCCEEEEEEETHH----------HHHHHHHHHHHHHHTTTSC--CCCEEEEEEETT
T ss_pred             CCeEEEccCCCcCCeEEEEEecCCCeEEEEEECCCCC----------HhHHHHHHHHHHHhccCCC--cCeEEEEEEECC
Confidence            4577888999988 6999998644  89999877543          2467789999999987666  8999887  556


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC-CCHHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGI-KYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~-~~~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++  +..+.+...... ....+++++|++|+++|...
T Consensus        94 ~~~lvme~l~--G~~~~~~~~~~~~~~~~~~~~l~~~L~~Lh~~~  136 (272)
T 4gkh_A           94 DAWLLTTAIP--GKTAFQVLEEYPDSGENIVDALAVFLRRLHSIP  136 (272)
T ss_dssp             EEEEEEECCC--SEEHHHHHHHCGGGHHHHHHHHHHHHHHHHTSC
T ss_pred             eEEEEEEeeC--CccccccccCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            6789999998  345544443322 23478899999999999865

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.85  E-value=2.2e-08  Score=82.16  Aligned_cols=125  Identities=16%  Similarity=0.215  Sum_probs=91.9

Q ss_pred             cCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHH
Q 048614            9 LDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALAL   88 (165)
Q Consensus         9 l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L   88 (165)
                      .+.+.+..+|.++  ++     ..+..+++++++|..|.||+|   ++.+|||....-         -...+...|+++|
T Consensus         3 ~~~~~l~~~l~~~--~p-----~~~~~~v~~l~~G~~n~v~~v---g~~~VlR~~~~~---------~~~~~~~~E~~~L   63 (306)
T 3tdw_A            3 QNKLHYTTMIMTQ--FP-----DISIQSVESLGEGFRNYAILV---NGDWVFRFPKSQ---------QGADELNKEIQLL   63 (306)
T ss_dssp             -CHHHHHHHHHHH--CT-----TSCCSCEEEEEECSSEEEEEE---TTTEEEEEESSH---------HHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHH--CC-----CCCceeeeecCCCcceeEEEE---CCEEEEEecCCc---------hHHHHHHHHHHHH
Confidence            5677888898864  21     234457899999999999999   358999984311         1236899999999


Q ss_pred             HHhhccCCCCCceEEEEcC---CCceEEEecCCCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHhcccc
Q 048614           89 KEHGQLCPDHVPEVYHFDR---TMSLIGMRYLEPPHIILRKGLIAGI---KYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus        89 ~~~~~~~p~~vP~v~~~D~---~~~~~vMEdL~~~~~~lr~~l~~g~---~~~~~a~~iG~~La~~h~~tsd  154 (165)
                      +.++...|..||+++.+..   ....++||+++  +..+.......-   ....++.++|++|+++|....+
T Consensus        64 ~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~--G~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~  133 (306)
T 3tdw_A           64 PLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ--GQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVE  133 (306)
T ss_dssp             HHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC--SEECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred             HHHHhcCCCCCCCeEeecccCCCceEEEEeccC--CeECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcc
Confidence            9998877788999998874   23579999998  345555333211   1246899999999999998753

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.85  E-value=1.1e-08  Score=80.92  Aligned_cols=103  Identities=17%  Similarity=0.073  Sum_probs=76.9

Q ss_pred             EecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC--ceEEEe
Q 048614           38 KEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTM--SLIGMR  115 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~--~~~vME  115 (165)
                      ...+||..|.|||+...++.+|||...+-..       -+..+...|+++|+.++.  ...||+++.++.+.  ..+|||
T Consensus        20 ~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~-------~~~~~~~~E~~~l~~l~~--~~~vP~v~~~~~~~~~~~lv~e   90 (263)
T 3tm0_A           20 KDTEGMSPAKVYKLVGENENLYLKMTDSRYK-------GTTYDVEREKDMMLWLEG--KLPVPKVLHFERHDGWSNLLMS   90 (263)
T ss_dssp             ECCSCCSSSEEEEEECSSCEEEEEEECGGGT-------TSTTCHHHHHHHHHHHTT--TSCCCCEEEEEEETTEEEEEEE
T ss_pred             eeccCCCCCeEEEEECCCCcEEEEeCCcccC-------CCHHHHHHHHHHHHHHhc--CCCCCeEEEEEecCCceEEEEE
Confidence            3466777899999997766999999875322       123478899999999977  35699999887655  449999


Q ss_pred             cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 048614          116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~  151 (165)
                      +++  +..+.+.+........++.++|+.|+++|..
T Consensus        91 ~i~--G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~~  124 (263)
T 3tm0_A           91 EAD--GVLCSEEYEDEQSPEKIIELYAECIRLFHSI  124 (263)
T ss_dssp             CCS--SEEHHHHCCTTTCHHHHHHHHHHHHHHHHHS
T ss_pred             ecC--CeehhhccCCcccHHHHHHHHHHHHHHHhCC
Confidence            998  4567665322222347899999999999983

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=98.78  E-value=4.8e-08  Score=79.70  Aligned_cols=126  Identities=11%  Similarity=0.038  Sum_probs=92.3

Q ss_pred             CCccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHH
Q 048614            4 TEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAY   82 (165)
Q Consensus         4 ~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~   82 (165)
                      ..|..|+++.+.++|.+.++-       . +-++++++ |..|.||+|...+| ++|||...|-.        .+.++..
T Consensus         6 ~~~~~l~~~~i~~~l~~~g~~-------~-~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~--------~~~~~~~   68 (328)
T 1zyl_A            6 FTFQTLHPDTIMDALFEHGIR-------V-DSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER--------WTADQIL   68 (328)
T ss_dssp             CCCCCCCHHHHHHHHHHTTCC-------C-CSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT--------SCHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCC-------C-CceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC--------CCHHHHH
Confidence            368999999999999876432       1 12567777 88999999998877 89999987432        2456788


Q ss_pred             HHHHHHHHhhccCCCCCceEEEEcCC-------CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 048614           83 FEALALKEHGQLCPDHVPEVYHFDRT-------MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus        83 ~E~~~L~~~~~~~p~~vP~v~~~D~~-------~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      .|.++++.+++. .-.||+++..|..       ....+||++++ . .+.      ...+..++++|++||++|..+.++
T Consensus        69 ~E~~~~~~L~~~-g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G-~-~~~------~~~~~~~~~~g~~La~lH~~~~~~  139 (328)
T 1zyl_A           69 EEHQFALQLVND-EVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG-R-QFE------ADNIDQMEAVGRYLGRMHQTGRKQ  139 (328)
T ss_dssp             HHHHHHHHHHHT-TCSBCCCCCBTTBSCEEETTEEEEEEECCCC-E-ECC------SSCHHHHHHHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHc-CCeecceeecCCcEEEEECCEEEEEEEecCC-C-CCC------CCCHHHHHHHHHHHHHHHHhhccC
Confidence            899999998764 2347777765322       22469999983 2 221      134678999999999999988765

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.78  E-value=2.2e-08  Score=81.42  Aligned_cols=126  Identities=17%  Similarity=0.188  Sum_probs=91.2

Q ss_pred             ccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHH
Q 048614            8 PLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALA   87 (165)
Q Consensus         8 ~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~   87 (165)
                      .++.+.+.++|++.  ++     .....+++++++|..|.||+|.   +++|||...+-         -...+...|+++
T Consensus         3 ~~~~~~l~~~l~~~--~p-----~~~~~~i~~~~~G~~n~v~~v~---~~~vlR~~~~~---------~~~~~~~~E~~~   63 (304)
T 3sg8_A            3 TYTFDQVEKAIEQL--YP-----DFTINTIEISGEGNDCIAYEIN---RDFIFKFPKHS---------RGSTNLFNEVNI   63 (304)
T ss_dssp             CCCHHHHHHHHHHH--CT-----TCCCCCCCEEEECSSEEEEEST---TSEEEEEESSH---------HHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHh--CC-----CccceeeEecCCCCcceEEEEC---CEEEEEecCCc---------chHHHHHHHHHH
Confidence            57889999999963  11     2334578889999999999985   47999986532         123688999999


Q ss_pred             HHHhhccCCCCCceEEEEcCCCc-----eEEEecCCCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHhcccc
Q 048614           88 LKEHGQLCPDHVPEVYHFDRTMS-----LIGMRYLEPPHIILRKGLIAGI---KYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus        88 L~~~~~~~p~~vP~v~~~D~~~~-----~~vMEdL~~~~~~lr~~l~~g~---~~~~~a~~iG~~La~~h~~tsd  154 (165)
                      |+.+....+..||+++.++....     .+|||++++  ..+.......-   ....++.++|.+|+++|..+..
T Consensus        64 l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G--~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~  136 (304)
T 3sg8_A           64 LKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG--VPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINIS  136 (304)
T ss_dssp             HHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC--EECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCT
T ss_pred             HHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC--eECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            99987766777999999865433     567999983  34433222211   1247899999999999986643

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=98.72  E-value=7.9e-08  Score=78.09  Aligned_cols=103  Identities=19%  Similarity=0.166  Sum_probs=74.6

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMR  115 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vME  115 (165)
                      .+++++||..|.+|+|    +++|||...+-..     -..+  | ..|+++|+.+++.  +..|+++++|++...++||
T Consensus        22 ~i~~l~gG~tN~~~~~----~~~vlR~~~~~~~-----~~~~--r-~~E~~~l~~l~~~--g~~P~~~~~~~~~~~~v~e   87 (301)
T 3dxq_A           22 GPLERLGGLTNLVFRA----GDLCLRIPGKGTE-----EYIN--R-ANEAVAAREAAKA--GVSPEVLHVDPATGVMVTR   87 (301)
T ss_dssp             SCEEEESCSSEEEEEE----TTEEEEEECC---------CCC--H-HHHHHHHHHHHHT--TSSCCEEEECTTTCCEEEE
T ss_pred             ceeEcCCcccccccee----eeEEEECCCCCcc-----ceeC--H-HHHHHHHHHHHHc--CCCCceEEEECCCCEEEEe
Confidence            3999999999999999    6899998875321     1122  3 3599999998875  2349999999999999999


Q ss_pred             cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 048614          116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      ++. ++..+...-...  .+....++|+.|+++|.....+
T Consensus        88 ~i~-~g~~l~~~~~~~--~~~~~~~~~~~La~lH~~~~~~  124 (301)
T 3dxq_A           88 YIA-GAQTMSPEKFKT--RPGSPARAGEAFRKLHGSGAVF  124 (301)
T ss_dssp             CCT-TCEECCHHHHHH--STTHHHHHHHHHHHHHTSCCCC
T ss_pred             ecC-CCccCCHhhHhh--hHHHHHHHHHHHHHHhCCCCCC
Confidence            993 233433221111  2457899999999999976543

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.67  E-value=1.7e-07  Score=75.90  Aligned_cols=103  Identities=15%  Similarity=0.151  Sum_probs=74.4

Q ss_pred             cceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--------E
Q 048614           34 ALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--------F  105 (165)
Q Consensus        34 ~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--------~  105 (165)
                      ..++++++||..|.+|+|...+|++|||...+           +.++...|.++++.+.+. ...||+++.        .
T Consensus        34 ~~~~~~l~gG~~n~~~~v~~~~~~~vlk~~~~-----------~~~~~~~e~~~l~~L~~~-g~~vp~~~~~~~g~~~~~  101 (346)
T 2q83_A           34 AEKIDVIQGNQMALVWKVHTDSGAVCLKRIHR-----------PEKKALFSIFAQDYLAKK-GMNVPGILPNKKGSLYSK  101 (346)
T ss_dssp             CCEEEECC----CEEEEEEETTEEEEEEEECS-----------CHHHHHHHHHHHHHHHHH-TCSSCCBCCCTTSCSCEE
T ss_pred             eEEeeeccccccCcEEEEEeCCCCEEEEecCC-----------CHHHHHHHHHHHHHHHHc-CCCCCceeecCCCCEEEE
Confidence            45889999999999999998877999998864           236777888998888764 235666664        3


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLY  156 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~  156 (165)
                      +.....++||++++ . .+.      ...+..+.++|+.||++|..+..+.
T Consensus       102 ~~~~~~~l~~~i~G-~-~~~------~~~~~~~~~~g~~La~lH~~~~~~~  144 (346)
T 2q83_A          102 HGSFLFVVYDWIEG-R-PFE------LTVKQDLEFIMKGLADFHTASVGYQ  144 (346)
T ss_dssp             ETTEEEEEEECCCC-B-CCC------TTSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             ECCEEEEEEEeecC-c-cCC------CCCHHHHHHHHHHHHHHHHhCCCCC
Confidence            55667899999983 2 221      1346778999999999999887664

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=98.56  E-value=3e-07  Score=80.30  Aligned_cols=107  Identities=15%  Similarity=0.094  Sum_probs=77.0

Q ss_pred             CCCcceeEecCCCceeEEEEEEeCC--CeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC
Q 048614           31 KFDALTIKEVGDGNLNFVYIVVGSS--GSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT  108 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rv~~~~--gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~  108 (165)
                      +.+.+++++++||..|.+|+|+.++  +++|||.-.+..       ..-.+| ..|+.+|+.+++.  +.+|++|++++ 
T Consensus       107 ~~~~~~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-------~~~idR-~~E~~vl~~L~~~--gl~P~ll~~~~-  175 (458)
T 2qg7_A          107 EVDSLEFQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-------DEIINR-EREKKISCILYNK--NIAKKIYVFFT-  175 (458)
T ss_dssp             GSTTEEEEEECC--CEEEEEEEETTTTEEEEEEEECC-C-------CSCSCH-HHHHHHHHHHTTS--SSBCCEEEEET-
T ss_pred             CccCeEEEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-------hhhcCH-HHHHHHHHHHHhc--CCCCCEEEEeC-
Confidence            3467899999999999999999886  489998754322       122234 6899999999874  35799999985 


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd  154 (165)
                       +..|||+++ + ..+..   ..-..|..+.+||+.||++|...-.
T Consensus       176 -~G~v~e~I~-G-~~l~~---~~l~~~~~~~~ia~~La~LH~~~~~  215 (458)
T 2qg7_A          176 -NGRIEEFMD-G-YALSR---EDIKNPKFQKLIAKNLKLLHDIKLN  215 (458)
T ss_dssp             -TEEEEECCC-S-EECCT---TTTTSHHHHHHHHHHHHHHHTCCCC
T ss_pred             -CeEEEEeeC-C-ccCCh---hhcCCHHHHHHHHHHHHHHhcCCcc
Confidence             346999998 3 34422   1113478899999999999987643

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=98.55  E-value=4.3e-07  Score=75.69  Aligned_cols=108  Identities=15%  Similarity=0.026  Sum_probs=75.1

Q ss_pred             CCCcceeEecCCCceeEEEEEEeCC----------CeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc
Q 048614           31 KFDALTIKEVGDGNLNFVYIVVGSS----------GSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP  100 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rv~~~~----------gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP  100 (165)
                      +.+.++++++++|..|.+|+|+..+          +++|+|...+-...     ..  +| ..|+++|+.+++.  +.+|
T Consensus        32 ~~~~~~~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-----~~--~~-~~E~~~l~~L~~~--g~~P  101 (369)
T 3c5i_A           32 TEDNLRVKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-----LY--NT-ISEFEVYKTMSKY--KIAP  101 (369)
T ss_dssp             CGGGEEEEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-----TS--CH-HHHHHHHHHHHHT--TSSC
T ss_pred             CcCceEEEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-----ee--cH-HHHHHHHHHHHhc--CCCC
Confidence            3457899999999999999999764          48999987653321     11  23 6799999999875  2399


Q ss_pred             eEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 048614          101 EVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus       101 ~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      +++..++  +.+|||+++ + ..+...-   -..+..+.++|+.||++|..+.+.
T Consensus       102 ~~~~~~~--~~~v~e~i~-G-~~l~~~~---~~~~~~~~~~a~~La~lH~~~~~~  149 (369)
T 3c5i_A          102 QLLNTFN--GGRIEEWLY-G-DPLRIDD---LKNPTILIGIANVLGKFHTLSRKR  149 (369)
T ss_dssp             CEEEEET--TEEEEECCC-S-EECCGGG---GGCHHHHHHHHHHHHHHHTHHHHS
T ss_pred             ceEEecC--CcEEEEEec-C-CcCChhh---cCChHHHHHHHHHHHHHHcCcccc
Confidence            9998873  689999998 3 3332110   124678999999999999976543

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=98.54  E-value=9.1e-07  Score=76.67  Aligned_cols=125  Identities=10%  Similarity=0.054  Sum_probs=87.3

Q ss_pred             ccCHhhHHHHHHhC-CCcccccCCCCCcceeEecCCCceeEEEEEEeC---------CCeEEEeecCccccccCCCCCCC
Q 048614            8 PLDDKSLLEYIKAT-PSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGS---------SGSFVIKQALPYVRCIGESWPMT   77 (165)
Q Consensus         8 ~l~~~~v~~Yl~~~-~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~---------~gsvIvKqa~p~~r~~~~~~~l~   77 (165)
                      .++.+.+..+++.. |-+.   +.+.+.+++++++||-.|.+|+|+.+         .+++||+.-.+..     +..++
T Consensus        48 ~~d~~~l~~l~~~~~p~w~---~~~~~~~~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-----~~~id  119 (424)
T 3mes_A           48 ITDTEIIIGICRKNIPGWK---EINESYIEVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-----GKFYD  119 (424)
T ss_dssp             --CHHHHHHHHHHHSTTCT---TCCGGGEEEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC------CCCC
T ss_pred             CCCHHHHHHHHHHHcCccc---cCCCCceEEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-----chhcC
Confidence            45667788888763 2221   11235789999999999999999987         3478888865432     22233


Q ss_pred             hHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHH-HHHcCCCCHHHHHHHHHHHHHHHhccc
Q 048614           78 KERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRK-GLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus        78 ~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~-~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                        | ..|+++|+.+++.  +.+|+++..++  ...|||+++ + .++.. .+    ..|.++.++|+.||++|....
T Consensus       120 --R-~~E~~~l~~L~~~--gi~P~l~~~~~--~~~I~efI~-G-~~l~~~~l----~~~~~~~~ia~~La~LH~~~~  183 (424)
T 3mes_A          120 --S-KVELDVFRYLSNI--NIAPNIIADFP--EGRIEEFID-G-EPLTTKQL----QLTHICVEVAKNMGSLHIINS  183 (424)
T ss_dssp             --H-HHHHHHHHHHHHT--TSSCCEEEEET--TEEEEECCC-S-EECCTGGG----GSHHHHHHHHHHHHHHHTHHH
T ss_pred             --H-HHHHHHHHHHHhc--CCCCCEEEEcC--CCEEEEEeC-C-ccCChhhc----CCHHHHHHHHHHHHHHhcCch
Confidence              3 4699999999875  35899997664  689999998 3 34322 11    247789999999999998654

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=98.51  E-value=5e-07  Score=75.17  Aligned_cols=124  Identities=12%  Similarity=0.115  Sum_probs=83.6

Q ss_pred             cccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHH
Q 048614            7 RPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEAL   86 (165)
Q Consensus         7 ~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~   86 (165)
                      -.++.+.+..+|.++-      +.+...++..+.|+|+.|.||+|++.+|++|||...+..             ...|.+
T Consensus         4 p~l~~~~l~~~l~~~y------gl~~~~~~~l~~G~g~~N~vy~v~~~~g~~vLK~~~~~~-------------~~~E~~   64 (339)
T 3i1a_A            4 QPIQAQQLIELLKVHY------GIDIHTAQFIQGGADTNAFAYQADSESKSYFIKLKYGYH-------------DEINLS   64 (339)
T ss_dssp             CSSCTTHHHHHHHHHH------CCCCSEEEEETTTSCSSCEEEEEECSSCEEEEEEEECSS-------------CCHHHH
T ss_pred             CCCCHHHHHHHHHHHc------CCCcceeEEeeccCccccceEEEEeCCCCEEEEEecCcc-------------chHHHH
Confidence            3588999999987641      112233344444555699999999887899999865421             146888


Q ss_pred             HHHHhhccCCCC-CceEEEE--------cCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccc
Q 048614           87 ALKEHGQLCPDH-VPEVYHF--------DRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLY  156 (165)
Q Consensus        87 ~L~~~~~~~p~~-vP~v~~~--------D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~  156 (165)
                      +|+.+++. .-. ||+++..        +......+||+++ +...+     .....+..+.++|..||++|..+.++.
T Consensus        65 ~l~~L~~~-g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~-G~~~~-----~~~~~~~~~~~lg~~La~LH~~~~~~~  136 (339)
T 3i1a_A           65 IIRLLHDS-GIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH-APNGF-----TQNLTGKQWKQLGKVLRQIHETSVPIS  136 (339)
T ss_dssp             HHHHHHHT-TCCSSCCCCCCTTSCSSEECSSEEEEEEECCC-CCBTT-----TSCCCHHHHHHHHHHHHHHHTCCCCHH
T ss_pred             HHHHHHhc-CCcccccceecCCCCEEEEECCEEEEEEeccC-CCcCc-----ccCCCHHHHHHHHHHHHHHhCcCCCCC
Confidence            88888763 222 6666643        2344578999998 33321     123446778999999999999987653

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=98.49  E-value=3.4e-07  Score=78.21  Aligned_cols=107  Identities=12%  Similarity=0.106  Sum_probs=73.9

Q ss_pred             CCcceeEecCCCceeEEEEEEeCC---------CeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE
Q 048614           32 FDALTIKEVGDGNLNFVYIVVGSS---------GSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV  102 (165)
Q Consensus        32 ~~~~~v~~l~~Gn~N~v~rv~~~~---------gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v  102 (165)
                      .+++++++++||..|.+|+|+.++         +++|||.-.+..        -.......|+++|+.+++.  +.+|++
T Consensus        50 ~~~l~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~--------~~~~~~~rE~~vl~~L~~~--gv~P~l  119 (379)
T 3feg_A           50 PEELRVYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL--------QGVDSLVLESVMFAILAER--SLGPQL  119 (379)
T ss_dssp             GGGCCCEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----------CCHHHHHHHHHHHHHHHHT--TSSCCE
T ss_pred             cCceEEEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc--------chHHHHHHHHHHHHHHHhc--CCCCeE
Confidence            478899999999999999999752         378888743311        1334455899999999885  346999


Q ss_pred             EEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 048614          103 YHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus       103 ~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      +.++++  -+|||+++ + .++...-   -..|.+..++++.||++|...-.+
T Consensus       120 l~~~~~--g~v~e~i~-G-~~l~~~~---l~~p~~~~~ia~~La~LH~~~~~~  165 (379)
T 3feg_A          120 YGVFPE--GRLEQYIP-S-RPLKTQE---LREPVLSAAIATKMAQFHGMEMPF  165 (379)
T ss_dssp             EEEETT--EEEEECCS-E-EECCGGG---GGCHHHHHHHHHHHHHHHTCCCSS
T ss_pred             EEEcCC--ccEEEEec-C-ccCChhH---hCCHHHHHHHHHHHHHHhCCCCCC
Confidence            999976  39999998 3 4443211   124788999999999999865443

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=98.40  E-value=1.1e-06  Score=75.80  Aligned_cols=104  Identities=13%  Similarity=0.130  Sum_probs=76.7

Q ss_pred             CCcceeEecCCCceeEEEEEEeCC---------CeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE
Q 048614           32 FDALTIKEVGDGNLNFVYIVVGSS---------GSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV  102 (165)
Q Consensus        32 ~~~~~v~~l~~Gn~N~v~rv~~~~---------gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v  102 (165)
                      .+.+++++++||..|.+|+|+.++         +++|||.-.+      +   -+.+....|+.+|+.+++.  +.+|++
T Consensus        73 ~~~~~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~------~---~~~~~li~E~~~l~~L~~~--g~~P~l  141 (429)
T 1nw1_A           73 LEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN------P---ETESHLVAESVIFTLLSER--HLGPKL  141 (429)
T ss_dssp             GGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS------C---CCHHHHHHHHHHHHHHHHT--TSSSCE
T ss_pred             ccceEEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCC------C---CcHHHHHHHHHHHHHHHhC--CCCCcE
Confidence            456899999999999999999752         3788887632      1   1125566799999998874  357999


Q ss_pred             EEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 048614          103 YHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus       103 ~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                      |+.+++  .+|||+++  +..+...-   -..+..+.+||+.||++|..+-
T Consensus       142 ~~~~~~--g~v~e~l~--G~~l~~~~---l~~~~~~~~ia~~La~LH~~~~  185 (429)
T 1nw1_A          142 YGIFSG--GRLEEYIP--SRPLSCHE---ISLAHMSTKIAKRVAKVHQLEV  185 (429)
T ss_dssp             EEEETT--EEEECCCC--EEECCTTG---GGSHHHHHHHHHHHHHHTTCCC
T ss_pred             EEEeCC--CEEEEEeC--CcccChhh---cCCHHHHHHHHHHHHHHhCCcc
Confidence            998864  49999997  33442211   1246789999999999998653

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=98.29  E-value=1.3e-06  Score=74.29  Aligned_cols=117  Identities=13%  Similarity=0.108  Sum_probs=70.9

Q ss_pred             CCCcceeEecCCCceeEEEEEEeCCCeEEEeec-Ccc-ccccCCCCCCChHHHH------------------HHHHHHHH
Q 048614           31 KFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQA-LPY-VRCIGESWPMTKERAY------------------FEALALKE   90 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa-~p~-~r~~~~~~~l~~~R~~------------------~E~~~L~~   90 (165)
                      +.++++|++++||..|.+|+|+.++++.+++.. ..+ +|+.|+...+...|..                  .|..+++.
T Consensus        51 ~~~~l~v~~lsGG~SN~~y~v~~~~~~~~~~~~~~~~llRi~g~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~  130 (401)
T 3g15_A           51 REDEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAI  130 (401)
T ss_dssp             CGGGCEEEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHH
T ss_pred             CcCCEEEEEeCCccccceEEEEECCCCcccccCCCeEEEEeCCCCccchhhhhHHHHHHHHHHhccCCCCCcchhHHHHH
Confidence            456899999999999999999987542222211 112 3655555544444432                  23334443


Q ss_pred             hhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccc
Q 048614           91 HGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLY  156 (165)
Q Consensus        91 ~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~  156 (165)
                      .+.  -+..|+++.+.+  +..++|++.  ...|..   .....|.+..+|+..||++|....++.
T Consensus       131 ls~--~g~~p~l~~~f~--~g~i~e~i~--g~~l~~---~~~~~~~~~~~ia~~La~lH~~~~~~~  187 (401)
T 3g15_A          131 LAE--RSLGPKLYGIFP--QGRLEQFIP--SRRLDT---EELSLPDISAEIAEKMATFHGMKMPFN  187 (401)
T ss_dssp             HHH--TTSSCCEEEEET--TEEEEECCC--EEECCG---GGGGSHHHHHHHHHHHHHHHTCCCSSC
T ss_pred             HHh--CCCCCEEEEEEC--CcEEEEecC--CCcCCh---hhhcCHHHHHHHHHHHHHHhccccccc
Confidence            333  356899998875  578899997  333322   112357899999999999998665543

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.72  E-value=0.00011  Score=58.42  Aligned_cols=110  Identities=14%  Similarity=0.074  Sum_probs=73.3

Q ss_pred             eEecCCCceeEEEEEEe-CCC-e--EEEeecCcccccc--------C-C--CCC------CChHHHHHHHHHHHHhhccC
Q 048614           37 IKEVGDGNLNFVYIVVG-SSG-S--FVIKQALPYVRCI--------G-E--SWP------MTKERAYFEALALKEHGQLC   95 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~-~~g-s--vIvKqa~p~~r~~--------~-~--~~~------l~~~R~~~E~~~L~~~~~~~   95 (165)
                      ...+|.|....||++.+ .+| .  ++||.-.+-....        + +  .|.      ....+...|++.|+.+... 
T Consensus        52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-  130 (258)
T 1zth_A           52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA-  130 (258)
T ss_dssp             EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC-
Confidence            46899999999999998 456 7  9999743221000        0 0  010      1123677888889888653 


Q ss_pred             CCCCceEEEEcCCCceEEEecCCCC---chHHHHHHHc--CCCCHHHHHHHHHHHHHHH
Q 048614           96 PDHVPEVYHFDRTMSLIGMRYLEPP---HIILRKGLIA--GIKYPLLAEHMSEFMAKTL  149 (165)
Q Consensus        96 p~~vP~v~~~D~~~~~~vMEdL~~~---~~~lr~~l~~--g~~~~~~a~~iG~~La~~h  149 (165)
                      ...+|.++.+  ..+.+||||++.+   ...|++....  ......++.+|...|..+|
T Consensus       131 ~i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH  187 (258)
T 1zth_A          131 GVSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLY  187 (258)
T ss_dssp             TCCCCCEEEE--ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCeEEEc--CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHH
Confidence            2368888876  4789999999521   2466665433  2234578999999999999

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=97.62  E-value=0.00066  Score=54.83  Aligned_cols=106  Identities=18%  Similarity=0.090  Sum_probs=74.5

Q ss_pred             EecCCCceeEEEEEEeCCC-eEEEeecCccccccC----------CCCC-CChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 048614           38 KEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIG----------ESWP-MTKERAYFEALALKEHGQLCPDHVPEVYHF  105 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~----------~~~~-l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  105 (165)
                      ..+|.|....||++.+.+| .++||.-..-.....          ..|. ....+...|+++|+.+.  - ..+|.++  
T Consensus        96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~--  170 (282)
T 1zar_A           96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVY--  170 (282)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEE--
T ss_pred             CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEE--
Confidence            6899999999999998666 899998753221100          0111 24567889999999998  2 5667755  


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      +.....+|||+++  +..|++ + .-.....++.+|...|..+|...
T Consensus       171 ~~~~~~lvmE~~~--g~~L~~-l-~~~~~~~i~~qi~~~l~~lH~~g  213 (282)
T 1zar_A          171 AWEGNAVLMELID--AKELYR-V-RVENPDEVLDMILEEVAKFYHRG  213 (282)
T ss_dssp             EEETTEEEEECCC--CEEGGG-C-CCSCHHHHHHHHHHHHHHHHHTT
T ss_pred             eccceEEEEEecC--CCcHHH-c-chhhHHHHHHHHHHHHHHHHHCC
Confidence            5678899999997  346665 3 22233479999999999999753

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.42  E-value=0.0024  Score=49.74  Aligned_cols=108  Identities=19%  Similarity=0.137  Sum_probs=76.9

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR  107 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      .+++ -++.+|.|....||++...++ .++||.-..-        ..+.++...|.++|+.+..  | ++++++.+  +.
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~   77 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG--------AMSEEDFIEEAEVMMKLSH--P-KLVQLYGVCLEQ   77 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT--------SBCHHHHHHHHHHHHTCCC--T-TBCCEEEEECSS
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccc--------ccCHHHHHHHHHHHHhCCC--C-CEeeEEEEEecC
Confidence            3445 578899999999999998766 8999976532        1344678889999887752  3 45555554  44


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ....+|||+++  ...|.+.+....  ..    -.++.++...|+.+|...
T Consensus        78 ~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  126 (269)
T 4hcu_A           78 APICLVFEFME--HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC  126 (269)
T ss_dssp             SSEEEEEECCT--TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEEeCC--CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            55689999997  347777775533  22    246788889999999754

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=97.38  E-value=0.0027  Score=49.63  Aligned_cols=109  Identities=17%  Similarity=0.063  Sum_probs=77.0

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTM  109 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~  109 (165)
                      .+.+ -++.+|.|....||++...++ .++||....-        ....++...|.++|+.+..  |..++-.-.+..+.
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~   81 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--------SMSPDAFLAEANLMKQLQH--QRLVRLYAVVTQEP   81 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT--------SSCHHHHHHHHHHHHHCCC--TTBCCEEEEECSSS
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCC--------cccHHHHHHHHHHHHhCCC--cCcceEEEEEcCCC
Confidence            3444 578899999999999998776 8999975421        2346788899999988742  54444444456667


Q ss_pred             ceEEEecCCCCchHHHHHHHcC---CCC----HHHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAG---IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g---~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++  ..+|.+.+...   ...    -.++.+|...|+.+|...
T Consensus        82 ~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  129 (279)
T 1qpc_A           82 IYIITEYME--NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN  129 (279)
T ss_dssp             CEEEEECCT--TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cEEEEecCC--CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            889999997  34777766542   122    257888999999999753

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=97.38  E-value=0.00035  Score=61.71  Aligned_cols=109  Identities=17%  Similarity=0.039  Sum_probs=74.5

Q ss_pred             eEecCCCceeEEEEEEeCCCeEEEeecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCC-CceEEEEcCCCceEEE
Q 048614           37 IKEVGDGNLNFVYIVVGSSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGQLCPDH-VPEVYHFDRTMSLIGM  114 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~-vP~v~~~D~~~~~~vM  114 (165)
                      .+.+|.|..-.||++...+..+++|.-.+.. +....+-....+|...|.++|+.+..  |.. .|.+|.++.+...+||
T Consensus       341 ~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h--~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKD--FGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             -------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGG--GTCCCCCEEEEETTTTEEEE
T ss_pred             CCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCC--CCcCceEEEEEeCCccEEEE
Confidence            4578999999999996655588888765532 11000112235677899999998853  443 3699999999999999


Q ss_pred             ecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ||++  ..+|.+.+.+   .-.++.+|...|..+|...
T Consensus       419 E~~~--ggsL~~~l~~---~~~i~~qi~~aL~~LH~~g  451 (540)
T 3en9_A          419 SYIN--GKLAKDVIED---NLDIAYKIGEIVGKLHKND  451 (540)
T ss_dssp             ECCC--SEEHHHHSTT---CTHHHHHHHHHHHHHHHTT
T ss_pred             ECCC--CCCHHHHHHH---HHHHHHHHHHHHHHHHHCc
Confidence            9997  3588777665   4478999999999999653

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=97.33  E-value=0.0029  Score=49.17  Aligned_cols=112  Identities=17%  Similarity=0.045  Sum_probs=73.4

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTM  109 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~  109 (165)
                      +++ -.+.+|.|....||++...+..++||.......   .+..-..++...|.++|+.+..  | ++++++.+  +...
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~   80 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPD---EDISQTIENVRQEAKLFAMLKH--P-NIIALRGVCLKEPN   80 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEETTEEEEEEEC-------------CHHHHHHHHHHHHHCCC--T-TBCCEEEEECCC--
T ss_pred             hheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCc---ccHHHHHHHHHHHHHHHHhcCC--C-CEeeEEEEEecCCc
Confidence            344 567889999999999998744899998764332   2234456788889999887752  3 34444443  5566


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++  ...|.+.+..+....    .++.+|...|+.+|...
T Consensus        81 ~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~  125 (271)
T 3dtc_A           81 LCLVMEFAR--GGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEA  125 (271)
T ss_dssp             CEEEEECCT--TEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             eEEEEEcCC--CCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            789999997  347777665554332    56788899999999864

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=97.31  E-value=0.0028  Score=50.81  Aligned_cols=106  Identities=16%  Similarity=0.047  Sum_probs=77.0

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCc
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMS  110 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~  110 (165)
                      ..++ -.+.+|.|....||++...+..++||+-...         -..++...|.+.|+.+.   -.++.+++.+..+..
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---------~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~   74 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE---------SERKAFIVELRQLSRVN---HPNIVKLYGACLNPV   74 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSST---------THHHHHHHHHHHHHHCC---CTTBCCEEEBCTTTT
T ss_pred             HhHeeeeeEeecCCCceEEEEEECCeeEEEEEecCh---------hHHHHHHHHHHHHhcCC---CCCcCeEEEEEcCCc
Confidence            3445 5678999999999999987558999986421         12356677888887663   235667788878889


Q ss_pred             eEEEecCCCCchHHHHHHHcCCC----C----HHHHHHHHHHHHHHHhc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGIK----Y----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~~----~----~~~a~~iG~~La~~h~~  151 (165)
                      .+||||++  ...|.+.+.....    .    -.++.+|...|+.+|..
T Consensus        75 ~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~  121 (307)
T 2eva_A           75 CLVMEYAE--GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM  121 (307)
T ss_dssp             EEEEECCT--TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEcCC--CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999997  4578787776542    1    24667889999999983

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=97.29  E-value=0.0047  Score=48.33  Aligned_cols=107  Identities=17%  Similarity=0.106  Sum_probs=72.6

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT  108 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~  108 (165)
                      .++ -++.+|.|....||++...++ .++||.-...        ..+.++...|+++|+.+.   -.++++++.+  +..
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~   92 (283)
T 3gen_A           24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG--------SMSEDEFIEEAKVMMNLS---HEKLVQLYGVCTKQR   92 (283)
T ss_dssp             GGEEEEEECC---CEEEEEEEETTTEEEEEEEECTT--------SBCHHHHHHHHHHHHTCC---CTTBCCEEEEECSSS
T ss_pred             HHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCC--------CCCHHHHHHHHHHHhcCC---CCCEeeEEEEEecCC
Confidence            344 568899999999999998877 7999976532        234467888988888775   2345555554  344


Q ss_pred             CceEEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++  ...|.+.+..  +...    -.++.+|...|..+|...
T Consensus        93 ~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  140 (283)
T 3gen_A           93 PIFIITEYMA--NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ  140 (283)
T ss_dssp             SEEEEECCCT--TCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEeccC--CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5689999997  3477777765  2222    257788888999999653

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=97.23  E-value=0.0039  Score=50.08  Aligned_cols=110  Identities=13%  Similarity=0.030  Sum_probs=77.9

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -.+.+|.|....||++.+. +| .++||........ ........++...|..+|+.+..  | ++++++.  .+.....
T Consensus        16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSR-ASRRGVSREEIEREVSILRQVLH--H-NVITLHDVYENRTDVV   91 (321)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSS-SCSSSBCHHHHHHHHHHHHHCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EeeEeeecCCEEEEEEEECCCCeEEEEEEEeccccc-ccccchhHHHHHHHHHHHHhCCC--C-CcceEEEEEecCCEEE
Confidence            4578999999999999886 45 7999977644332 12334567788899999987752  3 3444444  3556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  ...|.+.+......     -.++.+|...|..+|..
T Consensus        92 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~  134 (321)
T 2a2a_A           92 LILELVS--GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK  134 (321)
T ss_dssp             EEECCCC--SCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999997  35777877765432     25788889999999975

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=97.22  E-value=0.0022  Score=50.43  Aligned_cols=116  Identities=10%  Similarity=-0.021  Sum_probs=78.6

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT  108 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~  108 (165)
                      ...+ -.+.+|.|....||++.+. ++ .++||.-............-...+...|.++|+.+.   -.++++++.+..+
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~   94 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN---HPNIVKLYGLMHN   94 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCC---CTTBCCEEEEETT
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCC---CCCchhhheeecC
Confidence            4455 5678999999999999985 44 799997653221100000111256777888887663   3466778888888


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++  ...|.+.+.+.. ..     -.++.+|...|+.+|...
T Consensus        95 ~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  142 (287)
T 4f0f_A           95 PPRMVMEFVP--CGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN  142 (287)
T ss_dssp             TTEEEEECCT--TCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             CCeEEEEecC--CCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence            8899999997  346666665543 22     257888899999999865

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=97.17  E-value=0.0051  Score=48.05  Aligned_cols=110  Identities=13%  Similarity=0.062  Sum_probs=76.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -++.+|.|....||++.+. +| .++||........ ........++...|..+|+.+..  |. +++++.  .+.....
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~~~~E~~~l~~l~h--~~-i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLS-SSRRGVSREEIEREVNILREIRH--PN-IITLHDIFENKTDVV   84 (283)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSST-TCSSSBCHHHHHHHHHHHHHCCC--TT-BCCEEEEEECSSEEE
T ss_pred             hHHhhcccCceEEEEEEEcCCCCeeehHHhhhcccc-ccccchHHHHHHHHHHHHHhCCC--CC-eeehhheecCCCeEE
Confidence            4678899999999999886 45 7899976543321 12344567888899999988752  43 444443  4556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  ...|.+.+..+...     -.++.+|...|..+|..
T Consensus        85 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~  127 (283)
T 3bhy_A           85 LILELVS--GGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK  127 (283)
T ss_dssp             EEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeecC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999997  34677766554322     25788889999999965

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=97.15  E-value=0.0073  Score=48.91  Aligned_cols=110  Identities=15%  Similarity=0.057  Sum_probs=77.1

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      ..+.+|.|....||++.+. +| .++||........ ...-....++...|..+|+.+..  |. +++++  +.+.....
T Consensus        15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~~~~E~~~l~~l~h--p~-iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTK-SSRRGVSREDIEREVSILKEIQH--PN-VITLHEVYENKTDVI   90 (326)
T ss_dssp             EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCST-TCSSSBCHHHHHHHHHHHHHCCC--TT-BCCEEEEEECSSEEE
T ss_pred             eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccc-cccchhhHHHHHHHHHHHHhCCC--CC-CCcEEEEEEeCCEEE
Confidence            5678999999999999986 35 7888876543321 12234567888899999988752  43 34444  34556788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  ...|.+.+......     -.++.+|...|..+|..
T Consensus        91 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~  133 (326)
T 2y0a_A           91 LILELVA--GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL  133 (326)
T ss_dssp             EEEECCC--SCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCC--CCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  35777777655433     25778888999999964

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=97.13  E-value=0.0041  Score=51.27  Aligned_cols=106  Identities=15%  Similarity=0.024  Sum_probs=72.4

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceEEE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRTMSLIGM  114 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~~~~~vM  114 (165)
                      -.+.||.|..-.||++... +.+.||.-...-.     -+-..++...|+++|+.+.-  |..|. +|. ++.++..+||
T Consensus        40 l~~~iG~G~fG~Vy~~~~~-~~vAvK~~~~~~~-----~~~~~~~f~~E~~il~~l~H--pNIV~-l~g~~~~~~~~iVm  110 (307)
T 3omv_A           40 LSTRIGSGSFGTVYKGKWH-GDVAVKILKVVDP-----TPEQFQAFRNEVAVLRKTRH--VNILL-FMGYMTKDNLAIVT  110 (307)
T ss_dssp             EEEECCCCSSSEEEEEESS-SEEEEEECCCSSC-----CHHHHHHHHHHHHHHTTCCC--TTBCC-EEEEECSSSCEEEE
T ss_pred             EeeEEeeCCCcEEEEEEEC-CcEEEEEEEecCC-----CHHHHHHHHHHHHHHHhCCC--CCEee-EEEEEECCeEEEEE
Confidence            3577999999999999865 4788886431111     11223566778888876642  55453 444 4567778999


Q ss_pred             ecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          115 RYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++  ..+|.+.|...+  ..    -.++.+|+..|+-+|...
T Consensus       111 Ey~~--gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~  152 (307)
T 3omv_A          111 QWCE--GSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN  152 (307)
T ss_dssp             ECCS--SCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EcCC--CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  457888886543  22    257889999999999753

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=97.09  E-value=0.0027  Score=53.46  Aligned_cols=107  Identities=17%  Similarity=0.152  Sum_probs=67.7

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      -++.||.|..-.||++.+. +| .|.||.-...- ..    .-..++...|+++|+.+.-  |.. -++|  +.|.+...
T Consensus        28 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~----~~~~~~~~~E~~il~~l~H--pnI-V~~~~~~~~~~~~y   99 (350)
T 4b9d_A           28 RLQKIGEGSFGKAILVKSTEDGRQYVIKEINISR-MS----SKEREESRREVAVLANMKH--PNI-VQYRESFEENGSLY   99 (350)
T ss_dssp             EEEEC------CEEEEEETTTCCEEEEEEEECTT-SC----HHHHHHHHHHHHHHHHCCC--TTB-CCEEEEEEETTEEE
T ss_pred             EeEEEecCCCeEEEEEEECCCCCEEEEEEEehHH-CC----HHHHHHHHHHHHHHHHCCC--CCC-CcEEEEEEECCEEE
Confidence            6788999999999999875 45 79999743211 00    1124678889999988752  443 3444  34566678


Q ss_pred             EEEecCCCCchHHHHHHHcC--CCCH-----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAG--IKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g--~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|.+.|.+.  ..++     .++.+|...|.-+|...
T Consensus       100 iVmEy~~--gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~  145 (350)
T 4b9d_A          100 IVMDYCE--GGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK  145 (350)
T ss_dssp             EEEECCT--TCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCC--CCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  45787777542  2222     36788999999999753

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=97.09  E-value=0.0038  Score=48.51  Aligned_cols=108  Identities=17%  Similarity=0.130  Sum_probs=74.9

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR  107 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      .+++ -++.+|.|....||++...++ .++||....-        ..+.++...|.++|+.+..  | ++++++.+  +.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~   75 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG--------SMSEDEFFQEAQTMMKLSH--P-KLVKFYGVCSKE   75 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBT--------TBCHHHHHHHHHHHHHCCC--T-TBCCEEEEECSS
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccC--------CCcHHHHHHHHHHHHhCCC--C-CEeeEEEEEccC
Confidence            3455 577899999999999998877 7999976421        1344678889999988752  4 44455554  33


Q ss_pred             CCceEEEecCCCCchHHHHHHHcC-C-CC----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAG-I-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g-~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ....+|||+++  ...|.+.+... . ..    -.++.+|...|+.+|...
T Consensus        76 ~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  124 (268)
T 3sxs_A           76 YPIYIVTEYIS--NGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ  124 (268)
T ss_dssp             SSEEEEEECCT--TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEEccC--CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            45679999997  34566666542 2 22    257888899999999754

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=97.09  E-value=0.0072  Score=48.23  Aligned_cols=126  Identities=17%  Similarity=0.207  Sum_probs=83.4

Q ss_pred             HhhHHHHHHhCCCcccccCCCCCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHH
Q 048614           11 DKSLLEYIKATPSLSSKIGNKFDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALA   87 (165)
Q Consensus        11 ~~~v~~Yl~~~~~~~~~~~~~~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~   87 (165)
                      .+++..-+++.-.    .+.....+ -++.+|.|....||++.+. +| .++||.-...-       .-..++...|..+
T Consensus         2 ~e~~~~~l~~~~~----~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~E~~~   70 (297)
T 3fxz_A            2 DEEILEKLRSIVS----VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-------QPKKELIINEILV   70 (297)
T ss_dssp             HHHHHHHHHHHSB----SSCGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG-------CSCHHHHHHHHHH
T ss_pred             hHHHHhhhhcccC----cCChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc-------ccHHHHHHHHHHH
Confidence            4455555554321    13234455 6788999999999999875 44 79999754221       1235677888888


Q ss_pred             HHHhhccCCCCCceEEE--EcCCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614           88 LKEHGQLCPDHVPEVYH--FDRTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        88 L~~~~~~~p~~vP~v~~--~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      |+....  | ++++++.  .+.+...+||||++  ...|.+.+.......    .++.+|...|+.+|...
T Consensus        71 l~~l~h--p-~iv~~~~~~~~~~~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  136 (297)
T 3fxz_A           71 MRENKN--P-NIVNYLDSYLVGDELWVVMEYLA--GGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ  136 (297)
T ss_dssp             HHHCCC--T-TBCCEEEEEEETTEEEEEEECCT--TCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhcCCC--C-CCCeEeEEEEECCEEEEEEECCC--CCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            877542  3 4455554  46677889999997  347877776655432    56788888899998653

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.05  E-value=0.0062  Score=47.03  Aligned_cols=107  Identities=19%  Similarity=0.135  Sum_probs=75.1

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT  108 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~  108 (165)
                      +.+ -++.+|.|....||++...++ .++||.-....        ...++...|.+.|+.+.  .| ++++++.+  +..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~e~~~l~~l~--h~-~i~~~~~~~~~~~   76 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--------MSEEDFIEEAEVMMKLS--HP-KLVQLYGVCLEQA   76 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT--------BCHHHHHHHHHHHHTCC--CT-TBCCEEEEECSSS
T ss_pred             hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC--------CCHHHHHHHHHHHHhCC--CC-CEeeEEEEEccCC
Confidence            344 567899999999999998766 89999865322        23467788888887764  23 34455543  556


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...++||+++  ...|.+.+....  ..    -.++.+|...|..+|...
T Consensus        77 ~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  124 (267)
T 3t9t_A           77 PICLVTEFME--HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC  124 (267)
T ss_dssp             SCEEEECCCT--TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEeCCC--CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            7789999997  346777776532  22    246788889999999764

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=97.04  E-value=0.011  Score=47.08  Aligned_cols=110  Identities=8%  Similarity=-0.067  Sum_probs=74.7

Q ss_pred             cc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT  108 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~  108 (165)
                      .+ -.+.+|.|....||++.+.. | .++||.-.+.....    .-...+...|...|+.+   .-.++++++.+  +.+
T Consensus        32 ~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~e~~~l~~l---~hp~iv~~~~~~~~~~  104 (286)
T 3uqc_A           32 RYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLP----DDVLQETLSRTLRLSRI---DKPGVARVLDVVHTRA  104 (286)
T ss_dssp             TEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSC----HHHHHHHHHHHHHHHTC---CCTTBCCEEEEEEETT
T ss_pred             cEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccC----HHHHHHHHHHHHHHhcC---CCCCcceeeEEEEECC
Confidence            34 46789999999999999874 5 89999876433210    11225666677666444   33356667655  556


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC---HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKY---PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~---~~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++  +.+|.+.+..+...   -.++.+|...|..+|...
T Consensus       105 ~~~lv~e~~~--g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~g  149 (286)
T 3uqc_A          105 GGLVVAEWIR--GGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAG  149 (286)
T ss_dssp             EEEEEEECCC--EEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cEEEEEEecC--CCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCC
Confidence            6789999997  45888887655422   247788888899999763

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=97.04  E-value=0.0046  Score=50.67  Aligned_cols=105  Identities=13%  Similarity=0.069  Sum_probs=72.1

Q ss_pred             eeEecCCCceeEEEEEE------eCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 048614           36 TIKEVGDGNLNFVYIVV------GSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~------~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      -.+.+|.|....||++.      ...+ .++||...+.          ...+...|.+.++.+....-..+..++.+  +
T Consensus        69 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~  138 (365)
T 3e7e_A           69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----------NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF  138 (365)
T ss_dssp             EEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred             EEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----------ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence            34578999999999993      2344 7999986422          34577888888888765433334444444  5


Q ss_pred             CCCceEEEecCCCCchHHHHHHHc-----CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIA-----GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~-----g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+...+||||++  +..|.+.+..     +...     -.++.+|...|+.+|...
T Consensus       139 ~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~  192 (365)
T 3e7e_A          139 QNGSVLVGELYS--YGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE  192 (365)
T ss_dssp             SSCEEEEECCCC--SCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CCCcEEEEeccC--CCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            678899999997  4577777753     2222     257888899999999753

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=97.03  E-value=0.0021  Score=52.56  Aligned_cols=105  Identities=14%  Similarity=0.066  Sum_probs=70.8

Q ss_pred             EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c----CCC
Q 048614           38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D----RTM  109 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D----~~~  109 (165)
                      ++||.|..-.||++.+. ++ .|.||.-...-..     .-..+|...|+++|+.+.-  | ++.++|.+  +    ...
T Consensus        32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-----~~~~~~~~~E~~il~~l~H--p-nIV~~~~~~~~~~~~~~~  103 (290)
T 3fpq_A           32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-----KSERQRFKEEAEMLKGLQH--P-NIVRFYDSWESTVKGKKC  103 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-----HHHHHHHHHHHHHHHTCCC--T-TBCCEEEEEEEEETTEEE
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC-----HHHHHHHHHHHHHHHhCCC--C-CCCcEEEEEeeccCCCcE
Confidence            46999999999999876 34 6878865422110     1234677889999887642  3 44555543  2    233


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ..+||||++  +..|.+.|.++... .    .++.+|...|+-+|...
T Consensus       104 ~~lvmEy~~--gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~  149 (290)
T 3fpq_A          104 IVLVTELMT--SGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT  149 (290)
T ss_dssp             EEEEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             EEEEEeCCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            579999998  45788888765443 2    46778899999999754

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=97.01  E-value=0.0062  Score=48.35  Aligned_cols=106  Identities=14%  Similarity=0.129  Sum_probs=72.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--C---
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR--T---  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--~---  108 (165)
                      .++.+|.|....||++.+. +| .++||.-..      +......++...|.++|+.+.  -| ++.+++.+-.  .   
T Consensus        10 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~------~~~~~~~~~~~~E~~~l~~l~--hp-niv~~~~~~~~~~~~~   80 (332)
T 3qd2_B           10 PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRL------PNRELAREKVMREVKALAKLE--HP-GIVRYFNAWLETPPEK   80 (332)
T ss_dssp             EEEEEECC-CSEEEEEEETTTCCEEEEEEEEC------CSTTTHHHHHHHHHHHHTSCC--CT-TBCCEEEEEEECCSCH
T ss_pred             eeeEecCCCCeEEEEEEEcCCCcEEEEEEeec------CCchhHHHHHHHHHHHHHhCC--CC-CEeeEEEEEEEeccch
Confidence            4678999999999999986 45 799997531      122344577888888887764  23 3444443311  1   


Q ss_pred             ------------------------------------------------------CceEEEecCCCCchHHHHHHHcCCCC
Q 048614          109 ------------------------------------------------------MSLIGMRYLEPPHIILRKGLIAGIKY  134 (165)
Q Consensus       109 ------------------------------------------------------~~~~vMEdL~~~~~~lr~~l~~g~~~  134 (165)
                                                                            ...+|||+++  ...|.+.+......
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~--~~~L~~~~~~~~~~  158 (332)
T 3qd2_B           81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCR--KENLKDWMNRRCSL  158 (332)
T ss_dssp             HHHHHHC--------------------------------------------CCCEEEEEEECCC--SSCHHHHHHTCCSG
T ss_pred             hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecC--CCCHHHHHhcccCc
Confidence                                                                  1579999998  45787877765432


Q ss_pred             --------HHHHHHHHHHHHHHHhcc
Q 048614          135 --------PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       135 --------~~~a~~iG~~La~~h~~t  152 (165)
                              -.++.+|...|+.+|...
T Consensus       159 ~~~~~~~~~~i~~qi~~aL~~LH~~~  184 (332)
T 3qd2_B          159 EDREHGVCLHIFIQIAEAVEFLHSKG  184 (332)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHhCC
Confidence                    247889999999999763

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=96.99  E-value=0.0073  Score=52.14  Aligned_cols=107  Identities=17%  Similarity=0.185  Sum_probs=76.7

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~  107 (165)
                      +.+ .+++||.|..-.||++.+. +| .|.||.-.  .+  .   .-..++...|.++|+.+.-  |. +-++|  +.|.
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~--~~--~---~~~~~~~~~Ei~il~~l~H--pn-IV~l~~~~~~~  220 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD--LR--K---QQRRELLFNEVVIMRDYQH--EN-VVEMYNSYLVG  220 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEE--ST--T---CSSGGGHHHHHHHHHHCCC--TT-BCCEEEEEEET
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEe--cc--c---hhHHHHHHHHHHHHHhCCC--CC-CCceEEEEEEC
Confidence            345 6789999999999999976 45 78899753  11  1   1235678899999988752  43 33444  3466


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                      +...+||||++  +..|.+.+..+....    .++.+|...|.-+|..
T Consensus       221 ~~~~iVmEy~~--gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~  266 (423)
T 4fie_A          221 DELWVVMEFLE--GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ  266 (423)
T ss_dssp             TEEEEEEECCT--TEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CEEEEEEeCCC--CCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            77889999998  347777777776543    4677888888888875

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=96.97  E-value=0.0036  Score=51.13  Aligned_cols=106  Identities=15%  Similarity=0.207  Sum_probs=68.1

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC--
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTM--  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~--  109 (165)
                      -++.||.|..-.||++.+. +| .+.||.-    +.  ++-....++...|.++|+.+.-  |. +-++|.+  +.+.  
T Consensus         9 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i----~~--~~~~~~~~~~~~E~~il~~l~H--pn-IV~~~~~~~~~~~~~   79 (299)
T 4g31_A            9 PIQCLGRGGFGVVFEAKNKVDDCNYAIKRI----RL--PNRELAREKVMREVKALAKLEH--PG-IVRYFNAWLEKNTTE   79 (299)
T ss_dssp             EEEEEEECC--EEEEEEETTTCCEEEEEEE----EE--CSSHHHHHHHHHHHHHHTTCCC--TT-BCCEEEEEEEEC---
T ss_pred             EeeEEecCCCeEEEEEEECCCCCEEEEEEE----ec--cCCHHHHHHHHHHHHHHHhCCC--CC-CCeEEEEEEecCccc
Confidence            4678999999999999875 45 7889963    22  1112234677788888876632  43 4444432  2221  


Q ss_pred             ----------ceEEEecCCCCchHHHHHHHcCCCC--------HHHHHHHHHHHHHHHhcc
Q 048614          110 ----------SLIGMRYLEPPHIILRKGLIAGIKY--------PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ----------~~~vMEdL~~~~~~lr~~l~~g~~~--------~~~a~~iG~~La~~h~~t  152 (165)
                                ..+||||++  ...|.+.+......        -.++.+|...|.-+|...
T Consensus        80 ~~~~~~~~~~l~ivmE~~~--gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~  138 (299)
T 4g31_A           80 KLQPSSPKVYLYIQMQLCR--KENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG  138 (299)
T ss_dssp             -------CEEEEEEEECCC--SCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccCCCcEEEEEEecCC--CCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc
Confidence                      358999998  45788877654322        136788999999999764

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=96.95  E-value=0.0077  Score=48.88  Aligned_cols=107  Identities=14%  Similarity=0.129  Sum_probs=69.2

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      -++.||.|..-.||++.+. +| .+.||.-......    -.-...|...|.++|+.+.-  |. +.++|  +.|++...
T Consensus        17 i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~----~~~~~~~~~~Ei~il~~l~H--pn-Iv~~~~~~~~~~~~~   89 (275)
T 3hyh_A           17 IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA----KSDMQGRIEREISYLRLLRH--PH-IIKLYDVIKSKDEII   89 (275)
T ss_dssp             EEEEEEC---CCEEEEECTTTCCEEEEEEEECC----------CHHHHHHHHHHHHHCCC--TT-BCCEEEEEECSSEEE
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcC----CHHHHHHHHHHHHHHHHCCC--CC-CCeEEEEEEECCEEE
Confidence            4578999999999999875 45 7999975322111    12235688899999988752  43 33443  34667788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  + .|.+.+.+.... .    .++.+|...|.-+|...
T Consensus        90 ivmEy~~--g-~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~  132 (275)
T 3hyh_A           90 MVIEYAG--N-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK  132 (275)
T ss_dssp             EEEECCC--E-EHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCC--C-CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999996  3 566666654433 2    46778888888888753

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=96.94  E-value=0.017  Score=45.80  Aligned_cols=115  Identities=14%  Similarity=-0.000  Sum_probs=77.6

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT-  108 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~-  108 (165)
                      +.+ -++.+|.|....||++.+. +| .++||.-......  ..-.-...+...|.+.|+.+..+--.++++++.+-.+ 
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGG--GGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCC--TTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEeccccc--ccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            345 5688999999999999975 44 7999976533221  1112223467788899988877644456666654322 


Q ss_pred             ------CceEEEecCCCCchHHHHHHHcCCC--C-----HHHHHHHHHHHHHHHhcc
Q 048614          109 ------MSLIGMRYLEPPHIILRKGLIAGIK--Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ------~~~~vMEdL~~~~~~lr~~l~~g~~--~-----~~~a~~iG~~La~~h~~t  152 (165)
                            ...++||+++ .  .|.+.+.....  .     -.++.+|...|+.+|...
T Consensus        87 ~~~~~~~~~lv~e~~~-~--~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  140 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-Q--DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC  140 (308)
T ss_dssp             CSSSEEEEEEEEECCC-C--BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCceeEEEEehhhh-c--CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                  2589999998 3  67777766442  2     257888899999999764

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=96.93  E-value=0.0081  Score=47.86  Aligned_cols=111  Identities=16%  Similarity=0.064  Sum_probs=75.6

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT  108 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~  108 (165)
                      ..+ -++.+|.|....||++.+.+| .++||.-.....     -.-..++...|.++|+.+....|. +.+++.  .+..
T Consensus        28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~~~~~~-iv~~~~~~~~~~  101 (313)
T 3cek_A           28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-----DNQTLDSYRNEIAYLNKLQQHSDK-IIRLYDYEITDQ  101 (313)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC-----CHHHHHHHHHHHHHHHHHGGGCTT-BCCEEEEEECSS
T ss_pred             ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc-----cccchHHHHHHHHHHHhccccCCc-eEEEEEEeecCC
Confidence            344 567899999999999998777 789997532111     112346778899999888764454 444443  3556


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ...++||+.+   ..|.+.+......     -.++.+|...|+.+|...
T Consensus       102 ~~~lv~e~~~---~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  147 (313)
T 3cek_A          102 YIYMVMECGN---IDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG  147 (313)
T ss_dssp             EEEEEECCCS---EEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEecCC---CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6788999443   4777777665432     246788899999999763

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=96.93  E-value=0.017  Score=46.54  Aligned_cols=109  Identities=14%  Similarity=0.013  Sum_probs=73.9

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH  104 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      +.+ -.+.+|.|....||++...      .+ .++||.......      .-..++...|..+|+.+... |. +++++.
T Consensus        45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-p~-iv~~~~  116 (344)
T 1rjb_A           45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD------SSEREALMSELKMMTQLGSH-EN-IVNLLG  116 (344)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------------CHHHHHHHHHHHHHCCC-TT-BCCEEE
T ss_pred             HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC------HHHHHHHHHHHHHHHhhcCC-CC-eeeEEE
Confidence            344 4678999999999999861      23 699998764321      12347888999999887432 33 344443


Q ss_pred             --EcCCCceEEEecCCCCchHHHHHHHcCCC------------------------C----HHHHHHHHHHHHHHHhc
Q 048614          105 --FDRTMSLIGMRYLEPPHIILRKGLIAGIK------------------------Y----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       105 --~D~~~~~~vMEdL~~~~~~lr~~l~~g~~------------------------~----~~~a~~iG~~La~~h~~  151 (165)
                        .+.+...+|||+++  ..+|.+.+.....                        .    -.++.+|...|+.+|..
T Consensus       117 ~~~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  191 (344)
T 1rjb_A          117 ACTLSGPIYLIFEYCC--YGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK  191 (344)
T ss_dssp             EECSSSSCEEEEECCT--TCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeeCCccEEEEecCC--CCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence              35677889999997  4477777765431                        1    24788999999999975

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=96.90  E-value=0.0067  Score=51.00  Aligned_cols=108  Identities=17%  Similarity=0.181  Sum_probs=76.6

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~  107 (165)
                      +.+ .+++||.|..-.||++.+. +| .|.||.-.  .+.  .   -..++...|.++|+.+.-  |. +-++|  +.|.
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~--~~~--~---~~~~~~~~Ei~il~~l~H--pn-IV~l~~~~~~~  143 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD--LRK--Q---QRRELLFNEVVIMRDYQH--EN-VVEMYNSYLVG  143 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEE--GGG--C---SSGGGGHHHHHHHHHCCC--TT-BCCEEEEEEET
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEe--cCc--h---hHHHHHHHHHHHHHhCCC--CC-CCcEEEEEEEC
Confidence            344 5788999999999999886 45 78899753  111  1   234678889999988742  43 34444  3466


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +...+||||++  +..|.+.+.++....    .++.+|...|.-+|...
T Consensus       144 ~~~~ivmEy~~--gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~  190 (346)
T 4fih_A          144 DELWVVMEFLE--GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG  190 (346)
T ss_dssp             TEEEEEECCCT--TEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEeCCC--CCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            77889999998  347878777776543    46677888888888653

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=96.89  E-value=0.0087  Score=48.65  Aligned_cols=108  Identities=17%  Similarity=0.087  Sum_probs=75.4

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~  112 (165)
                      -++.||.|....||++.+.++ .++||.-....     .-.-..++...|.++|+.+....| ++++++.+  +.....+
T Consensus        13 i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~E~~~l~~l~~~~~-~iv~~~~~~~~~~~~~l   86 (343)
T 3dbq_A           13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE-----ADNQTLDSYRNEIAYLNKLQQHSD-KIIRLYDYEITDQYIYM   86 (343)
T ss_dssp             EEEEESCCSSEEEEEEECTTSCEEEEEEEECTT-----CCHHHHHHHHHHHHHHHHHTTTCT-TBCCEEEEEECSSEEEE
T ss_pred             EEEEEecCCCeEEEEEEeCCCCEEEEEEeeccc-----cchHHHHHHHHHHHHHHhhhhcCC-ceEEEeeeEeeCCEEEE
Confidence            578899999999999998777 78999753211     111233567789999988875433 45566655  4456689


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+.+   ..|.+.+......     -.++.+|...|..+|...
T Consensus        87 v~e~~~---~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~  128 (343)
T 3dbq_A           87 VMECGN---IDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG  128 (343)
T ss_dssp             EECCCS---EEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeCCC---CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999543   3677777765543     257788899999999764

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=96.89  E-value=0.0082  Score=48.11  Aligned_cols=112  Identities=17%  Similarity=0.042  Sum_probs=71.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccC-CCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIG-ESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~-~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~  112 (165)
                      -.+.+|.|....||++.+. +| .++||.-.......+ ..-.-...+...|.++|+.+..  |..++-.-.++.+...+
T Consensus        14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~l   91 (322)
T 2ycf_A           14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH--PCIIKIKNFFDAEDYYI   91 (322)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCC--TTBCCEEEEEESSSEEE
T ss_pred             EeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCC--CCCceEeeEEcCCceEE
Confidence            4678999999999999876 34 799998654321100 0011223456778888887742  55555444556677899


Q ss_pred             EEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~  151 (165)
                      |||+++  ...|.+.+..+...+     .++.+|...|..+|..
T Consensus        92 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  133 (322)
T 2ycf_A           92 VLELME--GGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN  133 (322)
T ss_dssp             EEECCT--TEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecCC--CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999997  346777776554332     4677888999999965

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=96.88  E-value=0.0076  Score=47.53  Aligned_cols=113  Identities=19%  Similarity=0.044  Sum_probs=76.5

Q ss_pred             CCCcceeE--ecCCCceeEEEEEEe--C-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614           31 KFDALTIK--EVGDGNLNFVYIVVG--S-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH  104 (165)
Q Consensus        31 ~~~~~~v~--~l~~Gn~N~v~rv~~--~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      +...+.+.  .+|.|....||++..  . .+ .++||.-.....     -+...++...|.++|+.+.  .|..++-.-.
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~   86 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-----DPALKDELLAEANVMQQLD--NPYIVRMIGI   86 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC----------CHHHHHHHHHHHHHHTCC--CTTBCCEEEE
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-----CHHHHHHHHHHHHHHHhCC--CCCEEEEEEE
Confidence            34455543  699999999999954  2 23 788997653321     1222467778888888774  3555555555


Q ss_pred             EcCCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          105 FDRTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ++.+...+|||+++  ..+|.+.+.++...     -.++.+|...|..+|...
T Consensus        87 ~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  137 (291)
T 1xbb_A           87 CEAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN  137 (291)
T ss_dssp             EESSSEEEEEECCT--TEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ECCCCcEEEEEeCC--CCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            66777889999997  45787877765432     257888899999999763

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=96.88  E-value=0.015  Score=46.17  Aligned_cols=107  Identities=8%  Similarity=0.055  Sum_probs=73.2

Q ss_pred             ccee--EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614           34 ALTI--KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR  107 (165)
Q Consensus        34 ~~~v--~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      .+.+  +.+|.|....||++.+. +| .++||.-...       -.-...+...|.++|+..... | ++++++.  .+.
T Consensus        13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~E~~~l~~~~~h-~-~i~~~~~~~~~~   83 (316)
T 2ac3_A           13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ-------PGHIRSRVFREVEMLYQCQGH-R-NVLELIEFFEEE   83 (316)
T ss_dssp             SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECC-------SSCCHHHHHHHHHHHHHTCCC-T-TBCCEEEEEEET
T ss_pred             eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeC-------cchhHHHHHHHHHHHHHhcCC-C-CeeeEEEEEeeC
Confidence            4455  56999999999999875 44 8999975311       123456888899888764322 3 3444443  356


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +...+|||+++  ...|.+.+......     ..++.+|...|+.+|..
T Consensus        84 ~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~  130 (316)
T 2ac3_A           84 DRFYLVFEKMR--GGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK  130 (316)
T ss_dssp             TEEEEEEECCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CEEEEEEEcCC--CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            77789999997  34677777654432     24778889999999975

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=96.87  E-value=0.0057  Score=48.45  Aligned_cols=109  Identities=14%  Similarity=0.058  Sum_probs=73.5

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIG  113 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~v  113 (165)
                      ..+.+|.|....||++...+..++||........   ...-..++...|..+|+.+..  | ++++++.+  +.....++
T Consensus        35 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~~~~~lv  108 (307)
T 2nru_A           35 GGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDI---TTEELKQQFDQEIKVMAKCQH--E-NLVELLGFSSDGDDLCLV  108 (307)
T ss_dssp             TCCEEEECSSEEEEEEESSSCEEEEEEECCCTTS---CTTTHHHHHHHHHHHHHHCCC--T-TBCCEEEEECSSSSCEEE
T ss_pred             cCCccccCCCeEEEEEEECCceEEEEEEecccCc---chHHHHHHHHHHHHHHHhcCC--C-CeEEEEEEEecCCceEEE
Confidence            3478999999999999986558999987643321   122335677788888887742  3 44555544  45677899


Q ss_pred             EecCCCCchHHHHHHHc---CC-CC----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIA---GI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~---g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|.+.+..   +. ..    -.++.+|...|..+|...
T Consensus       109 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  153 (307)
T 2nru_A          109 YVYMP--NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH  153 (307)
T ss_dssp             EECCT--TCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecC--CCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            99997  3466666653   11 22    247788899999999753

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=96.86  E-value=0.0034  Score=53.96  Aligned_cols=110  Identities=16%  Similarity=0.050  Sum_probs=68.4

Q ss_pred             eEecCCCceeEEEEEEeCCC-eEEEeecCccccc---cCCCCC----CCh------HH--HHHHHHHHHHhhccCCCCCc
Q 048614           37 IKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRC---IGESWP----MTK------ER--AYFEALALKEHGQLCPDHVP  100 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~---~~~~~~----l~~------~R--~~~E~~~L~~~~~~~p~~vP  100 (165)
                      ...||-|-.--||++.+.+| .+.||.=++-...   ......    ...      .|  +..|...|..+... ...+|
T Consensus       100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~-gv~vp  178 (397)
T 4gyi_A          100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE-GFPVP  178 (397)
T ss_dssp             EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT-TCSCC
T ss_pred             cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc-CCCCC
Confidence            46788888888999999888 8999963322110   000000    011      11  23466667666542 34578


Q ss_pred             eEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          101 EVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       101 ~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ++|.+  ..+++|||+++  +..+++.. .-.....+..+|...|..+|...
T Consensus       179 ~p~~~--~~~~LVME~i~--G~~L~~l~-~~~~~~~l~~qll~~l~~lH~~g  225 (397)
T 4gyi_A          179 EPIAQ--SRHTIVMSLVD--ALPMRQVS-SVPDPASLYADLIALILRLAKHG  225 (397)
T ss_dssp             CEEEE--ETTEEEEECCS--CEEGGGCC-CCSCHHHHHHHHHHHHHHHHHTT
T ss_pred             eeeec--cCceEEEEecC--CccHhhhc-ccHHHHHHHHHHHHHHHHHHHCC
Confidence            87754  57899999997  34554422 22223478899999999999764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=96.85  E-value=0.0074  Score=48.59  Aligned_cols=111  Identities=14%  Similarity=-0.004  Sum_probs=75.2

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT  108 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~  108 (165)
                      ..++ -.+.+|.|....||++...+..++||.......     -.-...+...|+++|+.+.  -|. +++++.  .+..
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~--hp~-iv~~~~~~~~~~  107 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDF-----HAERVNEFLREVAIMKRLR--HPN-IVLFMGAVTQPP  107 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCC-----SHHHHHHHHHHHHHHHHCC--CTT-BCCEEEEECSTT
T ss_pred             hhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCC-----CHHHHHHHHHHHHHHHhCC--CCC-EeeEEEEEEECC
Confidence            3455 467899999999999987644899997542211     0112346677888888775  244 344443  3455


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC----CC----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGI----KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~----~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++  ...|.+.+.+..    ..    -.++.+|...|+.+|...
T Consensus       108 ~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  157 (309)
T 3p86_A          108 NLSIVTEYLS--RGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN  157 (309)
T ss_dssp             CCEEEEECCT--TCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             ceEEEEecCC--CCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            6789999997  347777776543    22    247889999999999875

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=96.85  E-value=0.0024  Score=52.82  Aligned_cols=112  Identities=13%  Similarity=0.059  Sum_probs=72.0

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccC-CCCCCChHHHHHHHHHHHHhhccCCCC-CceEEEEcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIG-ESWPMTKERAYFEALALKEHGQLCPDH-VPEVYHFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~-~~~~l~~~R~~~E~~~L~~~~~~~p~~-vP~v~~~D~~~~~~  112 (165)
                      .+.+|.|....||++.+. +| .|+||.-.+...... .+..--.++...|..+|+.+... |.. .+..++.+.....+
T Consensus        99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-p~iv~~~~~~~~~~~~~l  177 (365)
T 2y7j_A           99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH-PHIITLIDSYESSSFMFL  177 (365)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTC-TTBCCEEEEEEBSSEEEE
T ss_pred             ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEeEEEEEEeeCCEEEE
Confidence            378999999999999986 46 899997654332100 00011134567788888877443 332 23334445667789


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      |||+++  ...|.+.+.++...     -.++.+|...|..+|..
T Consensus       178 v~e~~~--g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~  219 (365)
T 2y7j_A          178 VFDLMR--KGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN  219 (365)
T ss_dssp             EECCCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999997  34666666654322     25777888888888875

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=96.85  E-value=0.0037  Score=51.87  Aligned_cols=110  Identities=13%  Similarity=0.012  Sum_probs=74.8

Q ss_pred             cc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCC
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRT  108 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~  108 (165)
                      ++ -.+.||.|..-.||++... +| .+.||.-....-..    .-..++...|.++|+.+.-  |. +.++|  +.|++
T Consensus        33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~----~~~~~~~~~E~~il~~l~H--pn-Iv~l~~~~~~~~  105 (311)
T 4aw0_A           33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK----ENKVPYVTRERDVMSRLDH--PF-FVKLYFTFQDDE  105 (311)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHTTCCC--TT-BCCEEEEEECSS
T ss_pred             ccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCC----HHHHHHHHHHHHHHHhCCC--CC-CCeEEEEEEeCC
Confidence            45 4578999999999999876 45 78899754221111    1235788999999987642  44 33444  34667


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC-CCH----HHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGI-KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~-~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +..+||||++  +..|.+.+.+.. ...    .++.+|...|.-+|...
T Consensus       106 ~~yivmEy~~--gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~  152 (311)
T 4aw0_A          106 KLYFGLSYAK--NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG  152 (311)
T ss_dssp             EEEEEECCCT--TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEecCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7789999998  347777776643 333    36678888888888653

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=96.84  E-value=0.0061  Score=51.89  Aligned_cols=103  Identities=17%  Similarity=0.075  Sum_probs=75.3

Q ss_pred             eEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 048614           37 IKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMR  115 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vME  115 (165)
                      .+.||.|....||++...++ .|.||...+-        ....++...|+++|+.+..  |..++-.-.+..+...+|||
T Consensus       193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~h--~~iv~l~~~~~~~~~~lv~e  262 (454)
T 1qcf_A          193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--------SMSVEAFLAEANVMKTLQH--DKLVKLHAVVTKEPIYIITE  262 (454)
T ss_dssp             EEEEECCSSEEEEEEEETTTEEEEEEEECTT--------SBCHHHHHHHHHHHTTCCC--TTBCCEEEEECSSSCEEEEC
T ss_pred             EEEcccCCceEEEEEEECCccEEEEEEecCC--------CccHHHHHHHHHHHhhCCC--CCEeeEEEEEeCCccEEEEe
Confidence            46899999999999998766 8999986531        1356788899999887642  55454444455677889999


Q ss_pred             cCCCCchHHHHHHHcC---CCC----HHHHHHHHHHHHHHHhc
Q 048614          116 YLEPPHIILRKGLIAG---IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g---~~~----~~~a~~iG~~La~~h~~  151 (165)
                      +++  ...|.+.|...   ...    -.++.+|...|+-+|..
T Consensus       263 ~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~  303 (454)
T 1qcf_A          263 FMA--KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR  303 (454)
T ss_dssp             CCT--TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ecC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            997  34777777642   222    24788999999999975

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=96.82  E-value=0.0096  Score=47.36  Aligned_cols=108  Identities=17%  Similarity=0.161  Sum_probs=74.0

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      +++ -.+.+|.|....||++.+. +| .+++|.-...-       .-...+...|+++|+.+.  -| ++++++.  .+.
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-------~~~~~~~~~E~~~l~~l~--hp-~iv~~~~~~~~~   79 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-------EETQRTFLKEVKVMRCLE--HP-NVLKFIGVLYKD   79 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-------HHHHHHHHHHHHHHTTCC--CT-TBCCEEEEEEET
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-------HHHHHHHHHHHHHHHhCC--Cc-CcccEEEEEecC
Confidence            344 5678999999999999986 34 78889653321       122356777888887664  24 4444444  356


Q ss_pred             CCceEEEecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ....+|||+++  ..+|.+.+.. +...     -.++.+|...|+.+|...
T Consensus        80 ~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  128 (310)
T 3s95_A           80 KRLNFITEYIK--GGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN  128 (310)
T ss_dssp             TEEEEEEECCT--TCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeeEEEEEecC--CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            67789999997  4578777766 2222     257888999999999754

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=96.81  E-value=0.009  Score=47.81  Aligned_cols=105  Identities=14%  Similarity=0.020  Sum_probs=73.2

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC--C
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT--M  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~--~  109 (165)
                      -.+.+|.|....||++.+.. | .++||.-.....      .-..++...|.++|+.+.  .| ++++++.+  +..  .
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~--h~-~iv~~~~~~~~~~~~~   83 (319)
T 4euu_A           13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF------LRPVDVQMREFEVLKKLN--HK-NIVKLFAIEEETTTRH   83 (319)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG------GSCHHHHHHHHHHHHHCC--CT-TBCCEEEEEECTTTCC
T ss_pred             EEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc------cchHHHHHHHHHHHHhcC--CC-CcceEEEEeecCCCce
Confidence            56788999999999999873 4 799998653221      233577788999998875  24 45555543  223  4


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC----CC----HHHHHHHHHHHHHHHhc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGI----KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~----~~----~~~a~~iG~~La~~h~~  151 (165)
                      ..+|||+++  ...|.+.+....    ..    -.++.+|...|+.+|..
T Consensus        84 ~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~  131 (319)
T 4euu_A           84 KVLIMEFCP--CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN  131 (319)
T ss_dssp             EEEEEECCT--TCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEeCCC--CCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            479999997  457777776532    22    25778888999999865

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=96.80  E-value=0.0048  Score=48.30  Aligned_cols=111  Identities=11%  Similarity=0.095  Sum_probs=73.9

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      +++ -.+.+|.|....||++.+.. + .++||.........    .-...+...|.++|+.+.   -.++++++.+  +.
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~   81 (279)
T 3fdn_A            9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEK----AGVEHQLRREVEIQSHLR---HPNILRLYGYFHDA   81 (279)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH----HTCHHHHHHHHHHHTTCC---CTTBCCEEEEEECS
T ss_pred             ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccch----hhHHHHHHHHHHHHHcCC---CCCCcchhheEecC
Confidence            445 56889999999999998774 3 79999764322110    122356777888776654   2345555554  55


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ....+|||+++  ...|.+.+......     -.++.+|...|+.+|...
T Consensus        82 ~~~~lv~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  129 (279)
T 3fdn_A           82 TRVYLILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR  129 (279)
T ss_dssp             SEEEEEECCCT--TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEEEecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            56789999997  34666666553332     257788899999999653

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=96.79  E-value=0.013  Score=46.48  Aligned_cols=107  Identities=17%  Similarity=0.166  Sum_probs=72.1

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      -++.+|.|....||++.+.. | .++||.-....     .......+...|+++|+.+..  | ++++++.+  +.....
T Consensus         7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~~~~~   78 (311)
T 4agu_A            7 KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-----DDPVIKKIALREIRMLKQLKH--P-NLVNLLEVFRRKRRLH   78 (311)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-----C-HHHHHHHHHHHHHHHHCCC--T-TBCCEEEEEEETTEEE
T ss_pred             EeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-----cchHHHHHHHHHHHHHHhCCC--C-CccchhheeecCCeEE
Confidence            46789999999999999863 5 79999654221     111223456678888877752  3 34445444  455678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...+...+..+...     ..++.++...|+.+|...
T Consensus        79 lv~e~~~--~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~  122 (311)
T 4agu_A           79 LVFEYCD--HTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN  122 (311)
T ss_dssp             EEEECCS--EEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCC--CchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  45777766654433     257778889999999653

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=96.78  E-value=0.014  Score=46.84  Aligned_cols=109  Identities=12%  Similarity=0.035  Sum_probs=74.8

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeCC------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGSS------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH  104 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~~------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      +.+ -++.+|.|....||++.+.+      + .++||.-.+...      .-..++...|..+|+.+.   -.++++++.
T Consensus        47 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~---hp~iv~~~~  117 (343)
T 1luf_A           47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS------ADMQADFQREAALMAEFD---NPNIVKLLG  117 (343)
T ss_dssp             GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC------HHHHHHHHHHHHHHHTCC---CTTBCCEEE
T ss_pred             HHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC------HHHHHHHHHHHHHHHhCC---CCCEEEEEE
Confidence            444 56789999999999998752      3 699998753321      112356777888887763   234555555


Q ss_pred             E--cCCCceEEEecCCCCchHHHHHHHcC-------------------------CCC----HHHHHHHHHHHHHHHhcc
Q 048614          105 F--DRTMSLIGMRYLEPPHIILRKGLIAG-------------------------IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~--D~~~~~~vMEdL~~~~~~lr~~l~~g-------------------------~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +  +.....+||||++  +.+|.+.+...                         ...    -.++.+|...|..+|...
T Consensus       118 ~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~  194 (343)
T 1luf_A          118 VCAVGKPMCLLFEYMA--YGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK  194 (343)
T ss_dssp             EECSSSSCEEEEECCT--TCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEccCCceEEEEecCC--CCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4  5677899999997  45777777652                         111    137889999999999763

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=96.78  E-value=0.01  Score=48.97  Aligned_cols=108  Identities=13%  Similarity=0.093  Sum_probs=74.4

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FD  106 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D  106 (165)
                      ...+ -++.+|.|....||++.+. +| .++||.-..-        ....++...|...|+.+..  | ++++++.  .+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~h--p-niv~~~~~~~~   87 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG--------AAIDENVQREIINHRSLRH--P-NIVRFKEVILT   87 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESS--------TTSCHHHHHHHHHHHHCCC--T-TBCCEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecC--------ccccHHHHHHHHHHHhCCC--C-CCCcEEEEEee
Confidence            4455 6688999999999999987 44 7999975321        1223677888888887642  3 3444444  36


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+||||++  ...|.+.+.... ..    -.++.+|...|+.+|...
T Consensus        88 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~  136 (361)
T 3uc3_A           88 PTHLAIIMEYAS--GGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ  136 (361)
T ss_dssp             SSEEEEEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEEEEeCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            777889999997  346666665433 22    257778888888899653

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=96.78  E-value=0.0021  Score=49.71  Aligned_cols=111  Identities=14%  Similarity=-0.008  Sum_probs=73.5

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC-
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR-  107 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~-  107 (165)
                      .+++ -.+.+|.|....||++.+.+..++||.-.....     -.-...+...|+.+|+.+   --.++.+++.+  ++ 
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~E~~~l~~l---~h~~iv~~~~~~~~~~   80 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDW-----STRKSRDFNEECPRLRIF---SHPNVLPVLGACQSPP   80 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTC-----CHHHHHHHHHHGGGGCCC---SCTTEECEEEEECTTT
T ss_pred             HHHhHHHHHhcCCCcceEEEEEECCeeEEEEEeccccc-----CHHHHHHHHHHHHHHHhc---CCCchhheEEEEccCC
Confidence            3445 577899999999999998744899998653211     011123445555555443   23345666665  44 


Q ss_pred             -CCceEEEecCCCCchHHHHHHHcCCC---C----HHHHHHHHHHHHHHHhcc
Q 048614          108 -TMSLIGMRYLEPPHIILRKGLIAGIK---Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 -~~~~~vMEdL~~~~~~lr~~l~~g~~---~----~~~a~~iG~~La~~h~~t  152 (165)
                       ....+|||+++  +.+|++.+.....   .    -.++.+|...|+.+|...
T Consensus        81 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  131 (271)
T 3kmu_A           81 APHPTLITHWMP--YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE  131 (271)
T ss_dssp             SSSCEEEEECCT--TCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS
T ss_pred             CCCeEeeecccC--CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence             55689999997  4578888877542   2    257888899999999754

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=96.77  E-value=0.012  Score=45.80  Aligned_cols=105  Identities=16%  Similarity=0.117  Sum_probs=72.8

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      -.+.+|.|....||++.+.. + .+++|.......       -..++...|.++|+.+..  | ++++++.+  +.....
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~~~~~   82 (277)
T 3f3z_A           13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV-------EDVDRFKQEIEIMKSLDH--P-NIIRLYETFEDNTDIY   82 (277)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-------SCHHHHHHHHHHHHTCCC--T-TBCCEEEEEECSSEEE
T ss_pred             eeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc-------chHHHHHHHHHHHHhCCC--C-CEeeEEEEEecCCeEE
Confidence            45678999999999998874 3 788886543322       335788889999887732  3 44555544  455568


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+..+...     -.++.+|...|..+|...
T Consensus        83 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  126 (277)
T 3f3z_A           83 LVMELCT--GGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN  126 (277)
T ss_dssp             EEEECCC--SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeccC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  34666666554432     257888889999999653

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=96.77  E-value=0.011  Score=50.41  Aligned_cols=103  Identities=19%  Similarity=0.088  Sum_probs=73.6

Q ss_pred             eEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 048614           37 IKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMR  115 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vME  115 (165)
                      .+.+|.|..-.||++...++ .|+||...+-        ..+.++...|+++|+.+..  |..++-.-.+..+...+|||
T Consensus       189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~h--p~iv~~~~~~~~~~~~iv~e  258 (452)
T 1fmk_A          189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--------TMSPEAFLQEAQVMKKLRH--EKLVQLYAVVSEEPIYIVTE  258 (452)
T ss_dssp             EEEEEECSSCEEEEEEETTTEEEEEEECCTT--------SSCHHHHHHHHHHHHHCCC--TTBCCEEEEECSSSCEEEEC
T ss_pred             eeeecCCCCeEEEEEEECCCceEEEEEeccC--------CCCHHHHHHHHHHHHhCCC--CCEeeEEEEEcCCceEEEeh
Confidence            56799999999999998866 7999976532        1345788899999988742  44444333345567789999


Q ss_pred             cCCCCchHHHHHHHc--CC-CC----HHHHHHHHHHHHHHHhc
Q 048614          116 YLEPPHIILRKGLIA--GI-KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       116 dL~~~~~~lr~~l~~--g~-~~----~~~a~~iG~~La~~h~~  151 (165)
                      +++  ...|.+.|..  +. ..    -.++.+|...|+.+|..
T Consensus       259 ~~~--~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~  299 (452)
T 1fmk_A          259 YMS--KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM  299 (452)
T ss_dssp             CCT--TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhc--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            997  3467776653  22 22    25788999999999975

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=96.75  E-value=0.025  Score=44.60  Aligned_cols=106  Identities=17%  Similarity=0.074  Sum_probs=74.2

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      .++.+|.|....||++.+. +| .++||.-....      ..-..++...|...|+.+..  | ++++++.  .+.....
T Consensus        26 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~   96 (303)
T 3a7i_A           26 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE------AEDEIEDIQQEITVLSQCDS--P-YVTKYYGSYLKDTKLW   96 (303)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEETTT------CSTTHHHHHHHHHHHHHCCC--T-TBCCEEEEEEETTEEE
T ss_pred             HhhhhcccCCeEEEEEEECCCCcEEEEEEecccc------cHHHHHHHHHHHHHHHhCCC--C-CEeEEEEEEecCCeEE
Confidence            6788999999999999875 44 79999754221      12345778888888877632  3 3444443  3556778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+..+....    .++.+|...|+.+|...
T Consensus        97 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  139 (303)
T 3a7i_A           97 IIMEYLG--GGSALDLLEPGPLDETQIATILREILKGLDYLHSEK  139 (303)
T ss_dssp             EEEECCT--TEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  457878776665433    57778888888888753

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=96.75  E-value=0.0098  Score=46.21  Aligned_cols=109  Identities=16%  Similarity=0.027  Sum_probs=74.3

Q ss_pred             cc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT  108 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~  108 (165)
                      .+ -.+.+|.|....||++.+. +| .++||...+.....    .-..++...|...|+.+..  | ++++++.  .+..
T Consensus        12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~   84 (276)
T 2h6d_A           12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRS----LDVVGKIKREIQNLKLFRH--P-HIIKLYQVISTPT   84 (276)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHTCCC--T-TBCCEEEEEECSS
T ss_pred             cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccc----hhHHHHHHHHHHHHhcCCC--C-CEeEEEEEEecCC
Confidence            44 4578999999999999986 45 89999875433211    1234677788888876642  3 3444444  3556


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ...+|||+++  ...|.+.+......     -.++.+|...|..+|..
T Consensus        85 ~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~  130 (276)
T 2h6d_A           85 DFFMVMEYVS--GGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH  130 (276)
T ss_dssp             EEEEEEECCC--SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeccC--CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            7789999997  34677776554322     25778888889999965

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=96.74  E-value=0.015  Score=45.64  Aligned_cols=111  Identities=20%  Similarity=0.017  Sum_probs=75.7

Q ss_pred             CCcce-eE-ecCCCceeEEEEEEeC---CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 048614           32 FDALT-IK-EVGDGNLNFVYIVVGS---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF  105 (165)
Q Consensus        32 ~~~~~-v~-~l~~Gn~N~v~rv~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  105 (165)
                      .+.+. +. .+|.|....||++...   ++ .++||.......      ....++...|.++|+.+.  .|..++-.-.+
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~   79 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE------KADTEEMMREAQIMHQLD--NPYIVRLIGVC   79 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC------HHHHHHHHHHHHHHHHCC--CTTBCCEEEEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccc------hhHHHHHHHHHHHHHhCC--CCCEeEEEEEe
Confidence            44443 33 7999999999999753   34 699998653211      123467778888888774  35555555555


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +.+...+|||+++  ...|.+.+.+..  ..    -.++.+|...|..+|...
T Consensus        80 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  130 (287)
T 1u59_A           80 QAEALMLVMEMAG--GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN  130 (287)
T ss_dssp             ESSSEEEEEECCT--TEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCcEEEEEeCC--CCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6677889999998  457877775422  22    257788889999999753

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=96.74  E-value=0.0093  Score=47.49  Aligned_cols=112  Identities=12%  Similarity=0.010  Sum_probs=76.4

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC--CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF---  105 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---  105 (165)
                      ..+ -++.+|.|....||++.+.  +| .++||........  .   -...+...|.++|+.+..+--.++++++.+   
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~--~---~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~   85 (326)
T 1blx_A           11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE--E---GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV   85 (326)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT--T---SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEE
T ss_pred             hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccc--c---cCCchhhHHHHHHHhhhccCCCCeEeeeeeeee
Confidence            344 5788999999999999973  45 6889976543321  1   222356678888888876544456666654   


Q ss_pred             ----cCCCceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614          106 ----DRTMSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 ----D~~~~~~vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                          +.....+|||+++ .  .|.+.+....   ..    -.++.+|...|..+|...
T Consensus        86 ~~~~~~~~~~lv~e~~~-~--~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g  140 (326)
T 1blx_A           86 SRTDRETKLTLVFEHVD-Q--DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR  140 (326)
T ss_dssp             EECSSEEEEEEEEECCS-C--BHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccCCCceEEEEEecCC-C--CHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                4566789999997 3  6666665532   22    257788899999999763

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=96.74  E-value=0.015  Score=46.67  Aligned_cols=101  Identities=15%  Similarity=-0.018  Sum_probs=70.5

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC------C
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT------M  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~------~  109 (165)
                      -.+.+|.|....||++...+..++||.-.+.          ...+...|.++++...--.|. +.+++.+..+      .
T Consensus        46 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----------~~~~~~~e~~~~~~~~l~h~n-i~~~~~~~~~~~~~~~~  114 (342)
T 1b6c_B           46 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSR----------EERSWFREAEIYQTVMLRHEN-ILGFIAADNKDNGTWTQ  114 (342)
T ss_dssp             EEEEEEEETTEEEEEEEETTEEEEEEEECGG----------GHHHHHHHHHHHHHSCCCCTT-BCCEEEEEECCCSSCCC
T ss_pred             EEeeecCCCCcEEEEEEEcCccEEEEEeCch----------hHHHHHHHHHHHHHhhcCCCc-EEEEEeeecccCCccce
Confidence            4578899999999999986448999975321          235667888888765322243 4445544332      4


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHH
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTL  149 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h  149 (165)
                      ..+|||+++  ..+|.+.+.++...    -.++.+|...|+.+|
T Consensus       115 ~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH  156 (342)
T 1b6c_B          115 LWLVSDYHE--HGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH  156 (342)
T ss_dssp             EEEEECCCT--TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeecC--CCcHHHHHhccCccHHHHHHHHHHHHHHHHHHH
Confidence            689999997  45788888765543    257888899999999

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=96.73  E-value=0.017  Score=46.36  Aligned_cols=105  Identities=18%  Similarity=0.170  Sum_probs=71.2

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~  112 (165)
                      .++.+|.|....||++.+.+| .++||.-.....     -.-...+...|.++|+.+..  | ++++++.+  +.....+
T Consensus        25 ~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--p-~iv~~~~~~~~~~~~~l   96 (311)
T 3niz_A           25 KLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE-----DEGIPSTAIREISLLKELHH--P-NIVSLIDVIHSERCLTL   96 (311)
T ss_dssp             EEEEEEECSSCEEEEEEETTSCEEEEEEEC-----------CHHHHHHHHHHHHHHCCC--T-TBCCEEEEECCSSCEEE
T ss_pred             hhhhccCCCCeEEEEEEECCCCEEEEEEEecccc-----cchhhHHHHHHHHHHHHcCC--C-CEeeeeeEEccCCEEEE
Confidence            678899999999999999777 899997643221     11223567788888887742  4 34445543  4556689


Q ss_pred             EEecCCCCchHHHHHHHcCCC-C-----HHHHHHHHHHHHHHHhc
Q 048614          113 GMRYLEPPHIILRKGLIAGIK-Y-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~-~-----~~~a~~iG~~La~~h~~  151 (165)
                      |||+++  . .+.+.+..... .     ..++.+|...|+.+|..
T Consensus        97 v~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~  138 (311)
T 3niz_A           97 VFEFME--K-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH  138 (311)
T ss_dssp             EEECCS--E-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEcCCC--C-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999998  3 56666665432 2     24678888999999965

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=96.72  E-value=0.011  Score=51.74  Aligned_cols=103  Identities=19%  Similarity=0.088  Sum_probs=73.7

Q ss_pred             eEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 048614           37 IKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMR  115 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vME  115 (165)
                      .+.||.|....||++...++ .|+||.-.+-        ....++...|+++|+.+..  |..+.-.-.+..+...+|||
T Consensus       272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~h--pniv~~~~~~~~~~~~lv~e  341 (535)
T 2h8h_A          272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--------TMSPEAFLQEAQVMKKLRH--EKLVQLYAVVSEEPIYIVTE  341 (535)
T ss_dssp             EEEEEECSSEEEEEEEETTTEEEEEEEECTT--------SSCHHHHHHHHHHHHHCCC--TTBCCEEEEECSSSCEEEEC
T ss_pred             heecccCCCeEEEEEEECCCceEEEEEeCCC--------CCCHHHHHHHHHHHHhCCC--CCEeeEEEEEeeccceEeee
Confidence            46799999999999998866 7999976431        1345788899999988752  44444333345567789999


Q ss_pred             cCCCCchHHHHHHHc--CC-CC----HHHHHHHHHHHHHHHhc
Q 048614          116 YLEPPHIILRKGLIA--GI-KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       116 dL~~~~~~lr~~l~~--g~-~~----~~~a~~iG~~La~~h~~  151 (165)
                      ++.  ...|.+.|..  +. ..    -.++.+|...|+.+|..
T Consensus       342 ~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~  382 (535)
T 2h8h_A          342 YMS--KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM  382 (535)
T ss_dssp             CCT--TEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhc--CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            997  3477777653  22 21    26788999999999975

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=96.72  E-value=0.0049  Score=49.43  Aligned_cols=104  Identities=17%  Similarity=0.108  Sum_probs=70.6

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~  112 (165)
                      ....+|.|....||++...+| .++||...+..       .-..++...|.++|+.+.   -.++++++.+  +.....+
T Consensus        43 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~l  112 (321)
T 2qkw_B           43 HKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES-------SQGIEEFETEIETLSFCR---HPHLVSLIGFCDERNEMIL  112 (321)
T ss_dssp             CCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC-------SSHHHHHHHHHHGGGSCC---CTTBCCEEEECCCTTCCEE
T ss_pred             ccceeecCCCeeEEEEEECCCCEEEEEEecccC-------hHHHHHHHHHHHHHHhCC---CCCEeeEEEEEcCCCeEEE
Confidence            456789999999999998766 89999755321       223456677777775543   2345555554  4456789


Q ss_pred             EEecCCCCchHHHHHHHcCC-----CC----HHHHHHHHHHHHHHHhc
Q 048614          113 GMRYLEPPHIILRKGLIAGI-----KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~-----~~----~~~a~~iG~~La~~h~~  151 (165)
                      |||+++  ...|.+.+....     ..    -.++.+|...|+.+|..
T Consensus       113 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  158 (321)
T 2qkw_B          113 IYKYME--NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR  158 (321)
T ss_dssp             EEECCT--TCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEcCC--CCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC
Confidence            999997  346666554432     11    25788889999999975

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=96.71  E-value=0.013  Score=48.61  Aligned_cols=110  Identities=13%  Similarity=0.042  Sum_probs=75.7

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -.+.+|.|....||++... +| .++||.-...... ...-....++...|..+|+.+.  -| ++++++.  .+.....
T Consensus        16 ~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~~~~~~E~~il~~l~--hp-nIv~l~~~~~~~~~~~   91 (361)
T 2yab_A           16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSR-ASRRGVCREEIEREVSILRQVL--HP-NIITLHDVYENRTDVV   91 (361)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSST-TCSSSBCHHHHHHHHHHHTTCC--CT-TBCCEEEEEECSSEEE
T ss_pred             EeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccc-cccchhHHHHHHHHHHHHHhCC--Cc-CCCcEEEEEEeCCEEE
Confidence            5678999999999999876 45 7888976543321 1222345677888988887764  23 3444444  3456678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  +..|.+.+.+...+     -.++.+|...|..+|..
T Consensus        92 lv~e~~~--gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~  134 (361)
T 2yab_A           92 LILELVS--GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK  134 (361)
T ss_dssp             EEEECCC--SCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  34777777665433     25778888889989865

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=96.71  E-value=0.038  Score=45.23  Aligned_cols=105  Identities=16%  Similarity=0.054  Sum_probs=72.0

Q ss_pred             eEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 048614           37 IKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      .++||.|..-.||+....      ++ .|.||.-.....      .-..++...|+.+|+.+.-  |..| ++|.+  ++
T Consensus        31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~------~~~~~~f~~E~~il~~l~H--pNIV-~l~g~~~~~  101 (308)
T 4gt4_A           31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE------GPLREEFRHEAMLRARLQH--PNVV-CLLGVVTKD  101 (308)
T ss_dssp             EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC------C-CHHHHHHHHHHHHHCCC--TTBC-CEEEEECSS
T ss_pred             eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC------hHHHHHHHHHHHHHHhCCC--CCCC-CcceEEEEC
Confidence            578999999999998742      34 688998643221      2334678889999887642  4444 44544  45


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +...+||||++  ..+|++.|....                 ..    -.++.+|+..|+-+|...
T Consensus       102 ~~~~lV~Ey~~--~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~  165 (308)
T 4gt4_A          102 QPLSMIFSYCS--HGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH  165 (308)
T ss_dssp             SSCEEEEECCS--SCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEEcCC--CCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            66789999998  458888886421                 11    258899999999999743

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=96.70  E-value=0.0087  Score=48.90  Aligned_cols=109  Identities=15%  Similarity=0.110  Sum_probs=74.1

Q ss_pred             cc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT  108 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~  108 (165)
                      .+ -++.+|.|....||++.+. +| .++||.-.....     -+-...|...|.++|+.+..  | ++++++.+  +..
T Consensus        16 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--p-nIv~l~~~~~~~~   87 (328)
T 3fe3_A           16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-----NPTSLQKLFREVRIMKILNH--P-NIVKLFEVIETEK   87 (328)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-----CHHHHHHHHHHHHHHHHCCC--T-TBCCEEEEEECSS
T ss_pred             CEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-----CHHHHHHHHHHHHHHHhCCC--C-CEeeEEEEEEECC
Confidence            45 5688999999999999874 55 899997542211     11234677889998887752  3 45555544  456


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++  ...|.+.+.+.. ..    ..++.+|...|.-+|...
T Consensus        88 ~~~lv~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~  134 (328)
T 3fe3_A           88 TLYLIMEYAS--GGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR  134 (328)
T ss_dssp             EEEEEECCCT--TCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEECCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6789999997  346666665533 32    257788888999999764

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=96.69  E-value=0.013  Score=45.73  Aligned_cols=112  Identities=19%  Similarity=0.092  Sum_probs=75.0

Q ss_pred             CCCcc-eeEecCCCceeEEEEEEeCC--C---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614           31 KFDAL-TIKEVGDGNLNFVYIVVGSS--G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH  104 (165)
Q Consensus        31 ~~~~~-~v~~l~~Gn~N~v~rv~~~~--g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      ..+++ -.+.+|.|....||++...+  +   .++||...+...      .-..++...|.++|+.+.  .|..++-.-.
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~--h~~i~~~~~~   81 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT------LDNKEKFMSEAVIMKNLD--HPHIVKLIGI   81 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC------HHHHHHHHHHHHHHHHHC--CTTBCCEEEE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC------chHHHHHHHHHHHHHhCC--CCCcceEEEE
Confidence            34455 46778999999999997542  2   489998764321      122467778888888874  2554544444


Q ss_pred             EcCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          105 FDRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~D~~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +..+...+|||+++  ...|.+.+....  ..    -.++.+|...|..+|...
T Consensus        82 ~~~~~~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  133 (281)
T 3cc6_A           82 IEEEPTWIIMELYP--YGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN  133 (281)
T ss_dssp             ECSSSCEEEEECCT--TCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EcCCCCEEEEecCC--CCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            56667789999997  346777765432  22    246778899999999754

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=96.68  E-value=0.013  Score=48.89  Aligned_cols=108  Identities=17%  Similarity=0.069  Sum_probs=74.5

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~  112 (165)
                      -++.||.|....||++.+.+| .++||.-.....     -.-..++...|.++|+.+....| ++.++|  ..+.+...+
T Consensus        60 ~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~Ei~~l~~l~~~~~-~iv~~~~~~~~~~~~~l  133 (390)
T 2zmd_A           60 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-----DNQTLDSYRNEIAYLNKLQQHSD-KIIRLYDYEITDQYIYM  133 (390)
T ss_dssp             EEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC-----CHHHHHHHHHHHHHHHHHTTTCT-TBCCEEEEEECSSEEEE
T ss_pred             EEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc-----cHHHHHHHHHHHHHHHHcccCCC-eEEEEEEEEecCCEEEE
Confidence            457899999999999998767 789996532111     11234677889999988865334 455566  456667789


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+.+   ..|.+.+......     ..++.+|...|..+|...
T Consensus       134 v~E~~~---~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~  175 (390)
T 2zmd_A          134 VMECGN---IDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG  175 (390)
T ss_dssp             EEECCS---EEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EEecCC---CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999543   3677777665432     246788889999999754

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=96.66  E-value=0.012  Score=47.75  Aligned_cols=114  Identities=16%  Similarity=0.091  Sum_probs=69.3

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-E
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-H  104 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~  104 (165)
                      .+.+ -++.+|.|....||++...    +| .+.||.........   -.-...+...|.++|+.+..  |..++-+. +
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~~E~~~l~~l~h--p~iv~~~~~~   90 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR---NAKDTAHTKAERNILEEVKH--PFIVDLIYAF   90 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC-----------------HHHHHHHCCC--TTBCCEEEEE
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhh---hhhHHHHHHHHHHHHHhCCC--CCccceeEEE
Confidence            3455 5678999999999999873    45 78999876432110   11234566778888887752  44443322 3


Q ss_pred             EcCCCceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          105 FDRTMSLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      .+.....+||||++  ...|.+.+.....+ .    .++.+|...|..+|...
T Consensus        91 ~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~  141 (327)
T 3a62_A           91 QTGGKLYLILEYLS--GGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG  141 (327)
T ss_dssp             ECSSCEEEEEECCT--TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EcCCEEEEEEeCCC--CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            35567789999997  34677777654332 2    46778889999999753

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=96.66  E-value=0.015  Score=44.89  Aligned_cols=108  Identities=17%  Similarity=0.165  Sum_probs=70.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      .++.+|.|....||++.+. ++ .++||.......     -.....+...|...+...... |. +++++.  .+.+...
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~e~~~~~~l~~h-~~-iv~~~~~~~~~~~~~   87 (289)
T 1x8b_A           15 ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA-----GSVDEQNALREVYAHAVLGQH-SH-VVRYFSAWAEDDHML   87 (289)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT-----TSHHHHHHHHHHHHHHHSCSC-TT-BCCEEEEEEETTEEE
T ss_pred             hhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc-----ccHHHHHHHHHHHHHHHhCCC-CC-eeeeeeeeecCCeEE
Confidence            5678999999999999886 45 899997543221     112334556666666555322 33 344443  4567788


Q ss_pred             EEEecCCCCchHHHHHHHcC-----CCC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAG-----IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g-----~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ..+|.+.+...     ...    -.++.+|...|+.+|...
T Consensus        88 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  135 (289)
T 1x8b_A           88 IQNEYCN--GGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS  135 (289)
T ss_dssp             EEEECCT--TCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecC--CCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  34676766542     222    357888999999999753

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=96.65  E-value=0.0093  Score=47.70  Aligned_cols=105  Identities=12%  Similarity=-0.024  Sum_probs=71.3

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~  112 (165)
                      ..+.+|.|....||++...+| .++||.-......      -...+...|.++|+.+.   -.++++++.  .++....+
T Consensus        34 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~l  104 (326)
T 3uim_A           34 NKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ------GGELQFQTEVEMISMAV---HRNLLRLRGFCMTPTERLL  104 (326)
T ss_dssp             STTEEECCSSSEEEEECCSSSCCEEEEECCC-----------CCCHHHHHHHGGGTCC---CTTBCCCCEEECCSSCCEE
T ss_pred             cceeEecCCCcEEEEEEecCCCEEEEEEeccccCc------hHHHHHHHHHHHHHhcc---CCCccceEEEEecCCceEE
Confidence            457899999999999987767 8999987643221      11236677777775553   233444443  36677789


Q ss_pred             EEecCCCCchHHHHHHHcCCC----C-----HHHHHHHHHHHHHHHhc
Q 048614          113 GMRYLEPPHIILRKGLIAGIK----Y-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~----~-----~~~a~~iG~~La~~h~~  151 (165)
                      |||+++  ...|.+.+.....    .     -.++.+|...|+.+|..
T Consensus       105 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  150 (326)
T 3uim_A          105 VYPYMA--NGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDH  150 (326)
T ss_dssp             EEECCT--TCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEEecc--CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999997  3477777765331    1     35788899999999987

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=96.64  E-value=0.016  Score=45.33  Aligned_cols=108  Identities=18%  Similarity=0.084  Sum_probs=73.8

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D  106 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      ..++ -.+.+|.|....||++.+.. + .++||.-..-        ....++...|.++|+.+..  |. +++++.+  +
T Consensus        12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~~~~~E~~~l~~l~h--~~-i~~~~~~~~~   80 (288)
T 3kfa_A           12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--------TMEVEEFLKEAAVMKEIKH--PN-LVQLLGVCTR   80 (288)
T ss_dssp             GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC--------STHHHHHHHHHHHHHHCCC--TT-BCCEEEEECS
T ss_pred             ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC--------HHHHHHHHHHHHHHHhCCC--CC-EeeEEEEEcc
Confidence            3445 55779999999999999874 4 7899975421        1235677888888888752  43 4444443  4


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+|||+++  +.+|.+.+....   ..    -.++.+|...|+.+|...
T Consensus        81 ~~~~~~v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  131 (288)
T 3kfa_A           81 EPPFYIITEFMT--YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN  131 (288)
T ss_dssp             SSSEEEEEECCT--TEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEEEcCC--CCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC
Confidence            455689999997  457777776532   22    246678889999999653

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=96.63  E-value=0.024  Score=44.30  Aligned_cols=103  Identities=16%  Similarity=0.105  Sum_probs=71.1

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~~~~  111 (165)
                      -.+.+|.|....||++.+. +| .++||.-...         ...++...|.++|+.+..  |..+|.+..+.  .....
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---------~~~~~~~~e~~~l~~l~~--~~~i~~~~~~~~~~~~~~   81 (296)
T 3uzp_A           13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK---------TKHPQLHIESKIYKMMQG--GVGIPTIRWCGAEGDYNV   81 (296)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEEESC---------SSCCHHHHHHHHHHHHTT--STTCCCEEEEEEETTEEE
T ss_pred             EEEEEccCCCeEEEEEEEcCCCcEEEEEEecCC---------cchhHHHHHHHHHHHhhc--CCCCCccccccCCCCceE
Confidence            5678999999999999974 45 8999964321         122467889999888765  45566665554  34457


Q ss_pred             EEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++   .+|.+.+..  +...    -.++.+|...|+.+|...
T Consensus        82 lv~e~~~---~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  125 (296)
T 3uzp_A           82 MVMELLG---PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN  125 (296)
T ss_dssp             EEEECCC---CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecC---CCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999996   256666652  2222    257788888999999653

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=96.62  E-value=0.0059  Score=48.57  Aligned_cols=108  Identities=14%  Similarity=0.130  Sum_probs=71.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--Cce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT--MSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~--~~~  111 (165)
                      -++.+|.|..-.||++.+. .+ .++||.-.....    .-.-...|...|...|+.+..  | ++++++.+..+  ...
T Consensus        15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~~~e~~~l~~l~h--p-~iv~~~~~~~~~~~~~   87 (294)
T 4eqm_A           15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPR----EKEETLKRFEREVHNSSQLSH--Q-NIVSMIDVDEEDDCYY   87 (294)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSS----CCHHHHHHHHHHHHHHTTCCB--T-TBCCEEEEEECSSEEE
T ss_pred             EEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcc----ccHHHHHHHHHHHHHHhcCCC--C-CCceEEEeeeeCCeEE
Confidence            5788999999999999876 34 799997532111    111223566677777766532  3 45556665443  457


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ..+|.+.+......     -.++.+|...|+.+|...
T Consensus        88 lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  131 (294)
T 4eqm_A           88 LVMEYIE--GPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMR  131 (294)
T ss_dssp             EEEECCC--SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  35777777654432     256778889999999754

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=96.61  E-value=0.018  Score=47.65  Aligned_cols=107  Identities=15%  Similarity=0.088  Sum_probs=71.0

Q ss_pred             Ccce-eEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614           33 DALT-IKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH  104 (165)
Q Consensus        33 ~~~~-v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      +++. .++||.|..-.||++...      ++ .|.||.-..--       .-..++...|+++|+.+.-  | ++-++|.
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-------~~~~~~f~~E~~il~~l~H--p-nIV~l~g  110 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-------ESARQDFQREAELLTMLQH--Q-HIVRFFG  110 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-------HHHHHHHHHHHHHHTTCCC--T-TBCCEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-------HHHHHHHHHHHHHHHhCCC--C-CCCcEEE
Confidence            3443 467999999999999753      34 68889753211       1123566778888876632  4 3444555


Q ss_pred             E--cCCCceEEEecCCCCchHHHHHHHcCC----------------CC----HHHHHHHHHHHHHHHhc
Q 048614          105 F--DRTMSLIGMRYLEPPHIILRKGLIAGI----------------KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       105 ~--D~~~~~~vMEdL~~~~~~lr~~l~~g~----------------~~----~~~a~~iG~~La~~h~~  151 (165)
                      +  +.+...+||||++  ..+|++.|.+..                ..    -.++.+|+..|+-+|..
T Consensus       111 ~~~~~~~~~lV~Ey~~--~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~  177 (329)
T 4aoj_A          111 VCTEGRPLLMVFEYMR--HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL  177 (329)
T ss_dssp             EECSSSSEEEEEECCT--TCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEECCEEEEEEEcCC--CCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            4  4556789999998  457888776532                11    25888999999999975

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=96.60  E-value=0.0099  Score=49.18  Aligned_cols=112  Identities=13%  Similarity=0.083  Sum_probs=75.9

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      +++ -++.||.|..-.||++... +| .+.||.-.......    .-..++...|.++|+..... |. +++++.  .+.
T Consensus        23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~----~~~~~~~~~E~~il~~~~~h-p~-Iv~l~~~~~~~   96 (353)
T 3txo_A           23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQ----DDDVECTMTEKRILSLARNH-PF-LTQLFCCFQTP   96 (353)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH----HTTHHHHHHHHHHHHHTTTC-TT-BCCEEEEEECS
T ss_pred             hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcc----hhHHHHHHHHHHHHHhccCC-Cc-eeeEEEEEEeC
Confidence            345 5678999999999999876 34 78999765432111    13457788899998876432 33 334443  355


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +...+||||++  +..|...+.+...+ .    .++.+|...|..+|...
T Consensus        97 ~~~~lv~E~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g  144 (353)
T 3txo_A           97 DRLFFVMEFVN--GGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKG  144 (353)
T ss_dssp             SEEEEEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            66789999997  34677777664433 2    46788889999999753

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=96.60  E-value=0.025  Score=44.61  Aligned_cols=110  Identities=15%  Similarity=0.008  Sum_probs=74.8

Q ss_pred             Ccc-eeEecCCCceeEEEEEEe------CCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVG------SSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH  104 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~------~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      ..+ -.+.+|.|....||++..      .++ .++||...+...      .-..++...|..+|+.+... | ++++++.
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~-~i~~~~~   94 (313)
T 1t46_A           23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH------LTEREALMSELKVLSYLGNH-M-NIVNLLG   94 (313)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC------HHHHHHHHHHHHHHHHHCCC-T-TBCCEEE
T ss_pred             hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh------HHHHHHHHHHHHHHhhcccC-C-CeeeEEE
Confidence            344 567899999999999985      234 799998764321      12236777888888877432 3 3444443


Q ss_pred             --EcCCCceEEEecCCCCchHHHHHHHcCC-------------------CC----HHHHHHHHHHHHHHHhcc
Q 048614          105 --FDRTMSLIGMRYLEPPHIILRKGLIAGI-------------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 --~D~~~~~~vMEdL~~~~~~lr~~l~~g~-------------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                        .+.....+|||+++  ..+|.+.+....                   ..    -.++.+|...|+.+|...
T Consensus        95 ~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  165 (313)
T 1t46_A           95 ACTIGGPTLVITEYCC--YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN  165 (313)
T ss_dssp             EECSSSSCEEEEECCT--TEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCCCcEEEEecCC--CCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              46678899999997  457777776542                   11    257788899999999753

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=96.60  E-value=0.016  Score=49.27  Aligned_cols=105  Identities=12%  Similarity=0.086  Sum_probs=72.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--------
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--------  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--------  105 (165)
                      -++.||.|..-.||++.+. +| .|.||.-...     ....-...|...|.++|+.+..  | ++-++|.+        
T Consensus        58 ~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~-----~~~~~~~~~~~~Ei~il~~l~H--p-nIv~l~~~~~~~~~~~  129 (398)
T 4b99_A           58 IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNA-----FDVVTNAKRTLRELKILKHFKH--D-NIIAIKDILRPTVPYG  129 (398)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEETTT-----TSSHHHHHHHHHHHHHHHHCCC--T-TBCCEEEECCCSSCTT
T ss_pred             EEEEEecccCeEEEEEEECCCCCEEEEEEECcc-----ccchHHHHHHHHHHHHHHhcCC--C-CcceEeeeeecccccc
Confidence            5678999999999999875 45 7999974311     1112234678889999988752  3 34445543        


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      |...-.+||||++  + .|.+.+.+...+     ..++.+|...|.-+|..
T Consensus       130 ~~~~~~ivmE~~~--g-~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~  177 (398)
T 4b99_A          130 EFKSVYVVLDLME--S-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA  177 (398)
T ss_dssp             TCCCEEEEEECCS--E-EHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCEEEEEEeCCC--C-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3345579999997  3 477777765543     24778888999999975

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=96.59  E-value=0.024  Score=44.51  Aligned_cols=106  Identities=15%  Similarity=0.086  Sum_probs=70.3

Q ss_pred             eeEecCCCceeEEEEEE----e-CCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 048614           36 TIKEVGDGNLNFVYIVV----G-SSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~----~-~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      -++.+|.|....||++.    + .++ .++||.-.+...      .-...+...|.++|+.+..  | ++++++.+  +.
T Consensus        25 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~   95 (302)
T 4e5w_A           25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG------GNHIADLKKEIEILRNLYH--E-NIVKYKGICTED   95 (302)
T ss_dssp             EEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----------CCHHHHHHHHHHHHTCCC--T-TBCCEEEEEEC-
T ss_pred             hhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc------chhHHHHHHHHHHHHhCCC--C-CeeeeeeEEecC
Confidence            56889999999999998    2 245 899998654321      2345788889988887742  3 44455443  33


Q ss_pred             --CCceEEEecCCCCchHHHHHHHcC-C-CC----HHHHHHHHHHHHHHHhcc
Q 048614          108 --TMSLIGMRYLEPPHIILRKGLIAG-I-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 --~~~~~vMEdL~~~~~~lr~~l~~g-~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                        ....+|||+++  ...|.+.+... . ..    -.++.+|...|+.+|...
T Consensus        96 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  146 (302)
T 4e5w_A           96 GGNGIKLIMEFLP--SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ  146 (302)
T ss_dssp             --CCEEEEEECCT--TCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEEEeCC--CCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC
Confidence              33579999997  34777777432 2 22    257788899999999753

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=96.59  E-value=0.013  Score=45.98  Aligned_cols=111  Identities=14%  Similarity=0.160  Sum_probs=74.6

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      +++ -.+.+|.|....||++.+.. + .++||.........    .-...+...|.++|+.+..  | ++++++.+  +.
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~   86 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK----EGVEHQLRREIEIQSHLRH--P-NILRMYNYFHDR   86 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHTCCC--T-TBCCEEEEEECS
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccch----HHHHHHHHHHHHHHhcCCC--C-CEeeEEEEEEcC
Confidence            445 56779999999999998873 4 79999865432111    1234677788888877642  3 34444443  55


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ....+|||+++  ...|.+.+......     -.++.+|...|..+|...
T Consensus        87 ~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  134 (284)
T 2vgo_A           87 KRIYLMLEFAP--RGELYKELQKHGRFDEQRSATFMEELADALHYCHERK  134 (284)
T ss_dssp             SEEEEEECCCT--TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEEEEeCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            67789999997  34676766654322     257788888999999753

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=96.58  E-value=0.022  Score=44.71  Aligned_cols=103  Identities=13%  Similarity=-0.013  Sum_probs=70.6

Q ss_pred             cc-eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc------
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD------  106 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------  106 (165)
                      ++ -++.+|.|....||++...+..++||.-.+.          ...+...|.++++...---| ++.+++.+.      
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~----------~~~~~~~e~~~~~~~~l~h~-niv~~~~~~~~~~~~   77 (301)
T 3q4u_A            9 DITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR----------DEKSWFRETELYNTVMLRHE-NILGFIASDMTSRHS   77 (301)
T ss_dssp             GCEEEEEEEECSSEEEEEEEETTEEEEEEEECGG----------GHHHHHHHHHHHHHTCCCCT-TBCCEEEEEEEEETT
T ss_pred             cEEEEEeeccCCCcEEEEEEECCEEEEEEEeccc----------cchhhHHHHHHHHHhhccCc-CeeeEEEeeccccCC
Confidence            44 5788999999999999985448999975321          23456678887776432223 444555431      


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHH
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTL  149 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h  149 (165)
                      .....+||||++  ..+|++.+..+....    .++.+|...|+.+|
T Consensus        78 ~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH  122 (301)
T 3q4u_A           78 STQLWLITHYHE--MGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLH  122 (301)
T ss_dssp             EEEEEEEECCCT--TCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             CceeEEehhhcc--CCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHH
Confidence            234679999997  457888886554432    57888899999999

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=96.57  E-value=0.008  Score=47.41  Aligned_cols=106  Identities=22%  Similarity=0.176  Sum_probs=72.6

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      -.+.+|.|....||++.+. +| .++||......      -..+.++...|.++|+.+..  |. +++++.+  +.....
T Consensus        26 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~~~~~~E~~~l~~l~h--p~-iv~~~~~~~~~~~~~   96 (285)
T 3is5_A           26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR------SQVPMEQIEAEIEVLKSLDH--PN-IIKIFEVFEDYHNMY   96 (285)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG------CCSCHHHHHHHHHHHHTCCC--TT-BCCEEEEEECSSEEE
T ss_pred             ecceeccCCCeEEEEEEEccCCceEEEEEeeccc------cchhHHHHHHHHHHHHhCCC--ch-HHhHHHheecCCeEE
Confidence            5688999999999999886 34 78888754321      13456788889999987742  43 4445543  456678


Q ss_pred             EEEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++ + ..|.+.+..    +...     -.++.+|...|..+|...
T Consensus        97 lv~e~~~-~-~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  144 (285)
T 3is5_A           97 IVMETCE-G-GELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH  144 (285)
T ss_dssp             EEECCCS-C-CBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCC-C-CcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997 3 345555432    2322     257788889999999653

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=96.55  E-value=0.014  Score=45.97  Aligned_cols=111  Identities=14%  Similarity=-0.003  Sum_probs=73.0

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCc
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMS  110 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~  110 (165)
                      .+.+ -.+.+|.|....||++...+ .+.||.......     -.-..++...|.++|+.+.  -|..++-.-+.+....
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~   94 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAP-----TPQQLQAFKNEVGVLRKTR--HVNILLFMGYSTAPQL   94 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSC-----CHHHHHHHHHHHHHHTTCC--CTTBCCEEEEECSSSC
T ss_pred             ccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCC-----CHHHHHHHHHHHHHHHhCC--CCcEEEEEeeccCCcc
Confidence            4455 56889999999999998654 688886542221     1223356677777777654  2444444444555667


Q ss_pred             eEEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+|||+++  ...|.+.+.... .+     -.++.+|...|+.+|...
T Consensus        95 ~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~  140 (289)
T 3og7_A           95 AIVTQWCE--GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS  140 (289)
T ss_dssp             EEEEECCC--EEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEecC--CCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            89999997  457777774432 22     257888999999999753

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=96.55  E-value=0.029  Score=45.12  Aligned_cols=110  Identities=15%  Similarity=0.044  Sum_probs=73.9

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC--------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV  102 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v  102 (165)
                      +.+ -.+.+|.|....||++.+.        ++ .++||.......      .-...+...|.++|+.+... | +++++
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-p-~iv~~  106 (334)
T 2pvf_A           35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT------EKDLSDLVSEMEMMKMIGKH-K-NIINL  106 (334)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC------HHHHHHHHHHHHHHHHHCCC-T-TBCCE
T ss_pred             hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc------HHHHHHHHHHHHHHHHhhcC-C-CEeeE
Confidence            445 4588999999999999863        23 689998753221      12245677888888877432 3 34444


Q ss_pred             EE--EcCCCceEEEecCCCCchHHHHHHHcCCC----------------C-----HHHHHHHHHHHHHHHhcc
Q 048614          103 YH--FDRTMSLIGMRYLEPPHIILRKGLIAGIK----------------Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       103 ~~--~D~~~~~~vMEdL~~~~~~lr~~l~~g~~----------------~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +.  .+.....+|||+++  ..+|++.+.....                .     -.++.+|...|+.+|...
T Consensus       107 ~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  177 (334)
T 2pvf_A          107 LGACTQDGPLYVIVEYAS--KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK  177 (334)
T ss_dssp             EEEECSSSCCEEEEECCT--TCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEccCCceEEEEECCC--CCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            43  34566789999997  3478887765431                1     246888999999999753

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=96.54  E-value=0.025  Score=46.08  Aligned_cols=108  Identities=17%  Similarity=0.095  Sum_probs=73.6

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCC-----CCCceEEE
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCP-----DHVPEVYH  104 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p-----~~vP~v~~  104 (165)
                      +.+ -++.+|.|....||++.+. +| .++||.-..-        ....++...|.++|+.+....+     .++.+++.
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~  108 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA--------EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLD  108 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--------HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEE
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC--------CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeec
Confidence            345 6678999999999999876 34 7999986421        1234677889999998875432     13555555


Q ss_pred             E------cCCCceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhc
Q 048614          105 F------DRTMSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       105 ~------D~~~~~~vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~  151 (165)
                      +      +.....+|||+++  ...+ +.+....   ..    -.++.+|...|+.+|..
T Consensus       109 ~~~~~~~~~~~~~lv~e~~~--~~l~-~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~  165 (397)
T 1wak_A          109 DFKISGVNGTHICMVFEVLG--HHLL-KWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTK  165 (397)
T ss_dssp             EEEEEETTEEEEEEEECCCC--CBHH-HHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ceeecCCCCceEEEEEeccC--ccHH-HHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            4      4567889999997  3344 4443321   22    35788899999999986

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=96.52  E-value=0.014  Score=45.66  Aligned_cols=109  Identities=14%  Similarity=0.066  Sum_probs=74.0

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCC-C--------eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSS-G--------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPE  101 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~-g--------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~  101 (165)
                      .+++ -.+.+|.|....||++.+.. +        .+++|.....-       .-..++...|.++|+.+.   -.++++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-------~~~~~~~~~E~~~l~~l~---h~~iv~   76 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-------RNYSESFFEAASMMSKLS---HKHLVL   76 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-------GGGHHHHHHHHHHHHTSC---CTTBCC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-------HHHHHHHHHHHHHHHhCC---CCCEeE
Confidence            3445 57789999999999997652 1        47888754322       123467778888887775   234455


Q ss_pred             EEEE--cCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          102 VYHF--DRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       102 v~~~--D~~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++.+  +.....+|||+++  ...|.+.+....  ..    -.++.+|...|+.+|...
T Consensus        77 ~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  133 (289)
T 4fvq_A           77 NYGVCVCGDENILVQEFVK--FGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT  133 (289)
T ss_dssp             EEEEECCTTCCEEEEECCT--TCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEeCCCCEEEEECCC--CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            5554  5577889999997  347777776543  22    247888899999999653

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=96.52  E-value=0.019  Score=46.64  Aligned_cols=101  Identities=16%  Similarity=0.020  Sum_probs=66.0

Q ss_pred             EecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC------ce
Q 048614           38 KEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTM------SL  111 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~------~~  111 (165)
                      +.||.|..-.||++...+..|.||.-...          .......|++++... .+--.++-++|.+..+.      ..
T Consensus         9 ~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~----------~~~~~~~e~Ei~~~~-~l~HpNIv~l~g~~~~~~~~~~~~~   77 (303)
T 3hmm_A            9 ESIGKGRFGEVWRGKWRGEEVAVKIFSSR----------EERSWFREAEIYQTV-MLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             EEEEECSSSEEEEEEETTEEEEEEEECGG----------GHHHHHHHHHHHTST-TCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             EEEeeCCCeEEEEEEECCEEEEEEEECcc----------chhhHHHHHHHHHHh-cCCCCCCCcEEEEEEecCCCceEEE
Confidence            56999999999999986448999963211          123445566655322 22222344455543322      36


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                      +||||++  ..+|++.|..+....    .++.+++..|+-+|..
T Consensus        78 lV~Ey~~--~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~  119 (303)
T 3hmm_A           78 LVSDYHE--HGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME  119 (303)
T ss_dssp             EEEECCT--TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             EEecCCC--CCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            9999998  457888887765432    5788899999999964

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=96.52  E-value=0.0058  Score=50.20  Aligned_cols=112  Identities=17%  Similarity=0.133  Sum_probs=73.3

Q ss_pred             cc-eeEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEc
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HFD  106 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D  106 (165)
                      ++ -++.||.|....||++...    +| .+.||........   ...-..++...|.++|+.+... |..++-.. +.+
T Consensus        55 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~~E~~~l~~l~~h-~~iv~~~~~~~~  130 (355)
T 1vzo_A           55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIV---QKAKTTEHTRTERQVLEHIRQS-PFLVTLHYAFQT  130 (355)
T ss_dssp             GEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEE---EEESSGGGCCCHHHHHHHHHTC-TTBCCEEEEEEE
T ss_pred             ceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhh---hhhhHHHHHHHHHHHHHHccCC-CceeEEEEEEee
Confidence            44 4577899999999999873    44 7999986543211   0123345677799998887542 33333322 234


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      .....+||||++  ...|.+.+......     -.++.+|...|+.+|..
T Consensus       131 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~  178 (355)
T 1vzo_A          131 ETKLHLILDYIN--GGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL  178 (355)
T ss_dssp             TTEEEEEECCCC--SCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEeecCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            556779999997  34677777654432     24677888899999965

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=96.51  E-value=0.0085  Score=46.82  Aligned_cols=107  Identities=13%  Similarity=0.049  Sum_probs=71.7

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC-
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR-  107 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~-  107 (165)
                      ..++ -++.+|.|....||++...+..++||....-         ...++...|.+.|+.+..  |. +.+++.+  +. 
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---------~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~   87 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND---------ATAQAFLAEASVMTQLRH--SN-LVQLLGVIVEEK   87 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCC---------C--HHHHHTHHHHTTCCC--TT-BCCEEEEECCC-
T ss_pred             hhhceEEeEEecCCCceEEEEEEcCCEEEEEEecch---------hHHHHHHHHHHHHHhCCC--CC-EeeEEEEEEcCC
Confidence            3445 6678999999999999886448999976421         134677888888876642  43 4444543  33 


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC---C----CHHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGI---K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~---~----~~~~a~~iG~~La~~h~~t  152 (165)
                      ....+|||+++  ..+|.+.+....   .    .-.++.+|...|+.+|...
T Consensus        88 ~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  137 (278)
T 1byg_A           88 GGLYIVTEYMA--KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN  137 (278)
T ss_dssp             -CCEEEECCCT--TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEecCC--CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            35789999997  346766665432   1    1357788899999999763

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=96.50  E-value=0.025  Score=45.63  Aligned_cols=104  Identities=15%  Similarity=0.136  Sum_probs=72.1

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      ..+.+|.|....||++.+. +| .|+||.-.+..       .-..++...|..+|+.+..  |. +.+++  +.+.+...
T Consensus        49 ~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h--~n-iv~~~~~~~~~~~~~  118 (321)
T 2c30_A           49 SYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-------QQRRELLFNEVVIMRDYQH--FN-VVEMYKSYLVGEELW  118 (321)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-------CCSHHHHHHHHHHHTTCCC--TT-BCCEEEEEEETTEEE
T ss_pred             ccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-------hhHHHHHHHHHHHHHhCCC--CC-cceEEEEEEECCEEE
Confidence            4568999999999999886 45 89999754221       2335677788888876642  33 33333  34567788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                      +||||++  ...|.+.+..+....    .++.+|...|..+|..
T Consensus       119 lv~e~~~--~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~  160 (321)
T 2c30_A          119 VLMEFLQ--GGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ  160 (321)
T ss_dssp             EEECCCC--SCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecCC--CCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  347777666554432    5777788888888875

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=96.50  E-value=0.032  Score=43.47  Aligned_cols=103  Identities=17%  Similarity=0.149  Sum_probs=69.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      -.+.+|.|....||++.+. ++ .++||......         ...+...|.++|+.+..  +..+|.+..+  +.+...
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~~~e~~~l~~l~~--~~~i~~~~~~~~~~~~~~   81 (296)
T 4hgt_A           13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---------KHPQLHIESKIYKMMQG--GVGIPTIRWCGAEGDYNV   81 (296)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------------CCCHHHHHHHHHHHTT--STTCCCEEEEEEETTEEE
T ss_pred             EeeeecCCCCeEEEEEEEcCCCceEEEEeecccc---------cchHHHHHHHHHHHhcC--CCCCCeeeeecCCCCceE
Confidence            5678999999999999974 45 89999622111         11357778888887764  4456665554  445568


Q ss_pred             EEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++.   .|.+.+..  +...    -.++.+|...|+.+|...
T Consensus        82 lv~e~~~~---~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  125 (296)
T 4hgt_A           82 MVMELLGP---SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN  125 (296)
T ss_dssp             EEEECCCC---BHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEccCC---CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999962   56665552  2222    257788888999999653

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=96.49  E-value=0.036  Score=44.18  Aligned_cols=106  Identities=11%  Similarity=0.136  Sum_probs=72.0

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c-
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D-  106 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D-  106 (165)
                      +++ -++.+|.|....||++.+. ++ .++||...+          ....+...|.++|+.+... | ++++++.+  + 
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~----------~~~~~~~~E~~~l~~l~~~-~-~i~~~~~~~~~~  103 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP----------VKKKKIKREIKILENLRGG-P-NIITLADIVKDP  103 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS----------CCHHHHHHHHHHHHHHTTS-T-TBCCEEEEEECT
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc----------cchHHHHHHHHHHHHcCCC-C-CEEEeeeeeccC
Confidence            345 5788999999999999875 44 899997542          2346788899999887632 3 34444433  3 


Q ss_pred             -CCCceEEEecCCCCchHHHHHHHcCC--CCHHHHHHHHHHHHHHHhcc
Q 048614          107 -RTMSLIGMRYLEPPHIILRKGLIAGI--KYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 -~~~~~~vMEdL~~~~~~lr~~l~~g~--~~~~~a~~iG~~La~~h~~t  152 (165)
                       .....+|||+++  ...|++.+..-.  ..-.++.+|...|+.+|...
T Consensus       104 ~~~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  150 (330)
T 3nsz_A          104 VSRTPALVFEHVN--NTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG  150 (330)
T ss_dssp             TTCCEEEEEECCC--CCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCceEEEEeccC--chhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             344689999998  346665553211  11257888899999999653

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=96.48  E-value=0.014  Score=45.53  Aligned_cols=104  Identities=16%  Similarity=0.090  Sum_probs=69.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--------
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--------  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--------  105 (165)
                      .++.+|.|....||++.+. +| .++||.-..--        -..++...|.+.|+.+..  |. +.+++.+        
T Consensus        10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~E~~~l~~l~h--~~-i~~~~~~~~~~~~~~   78 (303)
T 1zy4_A           10 EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE--------EKLSTILSEVMLLASLNH--QY-VVRYYAAWLERRNFV   78 (303)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH--------HHHHHHHHHHHHHTTCCC--TT-BCCEEEEEEECCCCC
T ss_pred             hhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH--------HHHHHHHHHHHHHHhcCc--hH-HHHHHHHHHhhcchh
Confidence            4678999999999999975 45 79999763211        123566678877766632  33 3344432        


Q ss_pred             -------cCCCceEEEecCCCCchHHHHHHHcCCC-C-----HHHHHHHHHHHHHHHhcc
Q 048614          106 -------DRTMSLIGMRYLEPPHIILRKGLIAGIK-Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 -------D~~~~~~vMEdL~~~~~~lr~~l~~g~~-~-----~~~a~~iG~~La~~h~~t  152 (165)
                             +.....+|||+++  ...|.+.+..... .     -.++.+|...|+.+|...
T Consensus        79 ~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  136 (303)
T 1zy4_A           79 KPMTAVKKKSTLFIQMEYCE--NGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQG  136 (303)
T ss_dssp             C------CEEEEEEEEECCC--SCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhcccccCCceEEEEecCC--CCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCC
Confidence                   2455679999997  3477777764332 1     247889999999999764

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=96.47  E-value=0.022  Score=44.34  Aligned_cols=112  Identities=13%  Similarity=0.095  Sum_probs=75.3

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D  106 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      .+++ -.+.+|.|....||++.+. +| .++||......... .   -...+...|.+.|+.+..  | ++++++.+  +
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~---~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~   82 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-A---GMVQRVQNEVKIHCQLKH--P-SILELYNYFED   82 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-T---TCHHHHHHHHHHHTTBCC--T-TBCCEEEEEEC
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhh-h---hHHHHHHHHHHHHHhCCC--C-CeEeEEEEEcc
Confidence            3445 5678999999999999875 45 89999875433211 1   234677788888766542  3 44445443  4


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+|||+++  ...|.+.+... ...     -.++.+|...|..+|...
T Consensus        83 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  132 (278)
T 3cok_A           83 SNYVYLVLEMCH--NGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG  132 (278)
T ss_dssp             SSEEEEEEECCT--TEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCeEEEEEecCC--CCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            556689999997  35777777653 222     257888899999999753

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=96.46  E-value=0.042  Score=45.39  Aligned_cols=107  Identities=13%  Similarity=0.014  Sum_probs=73.4

Q ss_pred             eeEecCCCceeEEEEEEeC--------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-
Q 048614           36 TIKEVGDGNLNFVYIVVGS--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-  105 (165)
                      -.+.||.|....||++...        ++ .++||.......      .-..++...|.++|+.+... | ++++++.+ 
T Consensus        85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-p-nIv~~~~~~  156 (370)
T 2psq_A           85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT------EKDLSDLVSEMEMMKMIGKH-K-NIINLLGAC  156 (370)
T ss_dssp             EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCB------HHHHHHHHHHHHHHHHSCCC-T-TBCCEEEEE
T ss_pred             eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcC------HHHHHHHHHHHHHHHHhcCC-C-CEeeEEEEE
Confidence            4567999999999999752        23 588898753321      12346778899999887432 3 34455543 


Q ss_pred             -cCCCceEEEecCCCCchHHHHHHHcCCC----------------C-----HHHHHHHHHHHHHHHhcc
Q 048614          106 -DRTMSLIGMRYLEPPHIILRKGLIAGIK----------------Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 -D~~~~~~vMEdL~~~~~~lr~~l~~g~~----------------~-----~~~a~~iG~~La~~h~~t  152 (165)
                       +.....+||||++  ...|++.+.....                .     -.++.+|...|+.+|...
T Consensus       157 ~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  223 (370)
T 2psq_A          157 TQDGPLYVIVEYAS--KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK  223 (370)
T ss_dssp             CSSSSCEEEEECCT--TCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCCEEEEEEcCC--CCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             5567789999997  3478887765431                1     247889999999999763

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=96.43  E-value=0.032  Score=44.77  Aligned_cols=107  Identities=16%  Similarity=0.026  Sum_probs=71.1

Q ss_pred             cc-eeEecCCCceeEEEEEEe-----CCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-
Q 048614           34 AL-TIKEVGDGNLNFVYIVVG-----SSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-  105 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~-----~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-  105 (165)
                      .+ -++.+|.|....||++..     .+| .++||.-.+..       .-...+...|.++|+.+.  -| .+++++.+ 
T Consensus        42 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~--h~-~iv~~~~~~  111 (326)
T 2w1i_A           42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-------EEHLRDFEREIEILKSLQ--HD-NIVKYKGVC  111 (326)
T ss_dssp             GEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-------SHHHHHHHHHHHHHHTCC--CT-TBCCEEEEE
T ss_pred             HceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-------HHHHHHHHHHHHHHHhCC--CC-CeeeEEEEE
Confidence            44 578899999999999983     245 79999865321       122356777888887764  23 34445443 


Q ss_pred             -cC--CCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          106 -DR--TMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 -D~--~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                       +.  ....+|||+++  ..+|.+.+.+..  ..    -.++.+|...|+.+|...
T Consensus       112 ~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  165 (326)
T 2w1i_A          112 YSAGRRNLKLIMEYLP--YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR  165 (326)
T ss_dssp             CC----CCEEEECCCT--TCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EecCCCceEEEEECCC--CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             32  35689999997  347777776643  22    246788899999999753

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=96.43  E-value=0.023  Score=46.90  Aligned_cols=113  Identities=16%  Similarity=0.101  Sum_probs=75.9

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFD  106 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D  106 (165)
                      .+++ -.+.+|.|....||++... +| .++||.-.......    .-..++...|.++|+..... |. +++++  +.+
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~E~~il~~~~~h-p~-iv~l~~~~~~   89 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM----DDDVECTMVEKRVLSLAWEH-PF-LTHMFCTFQT   89 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHHHTTC-TT-BCCEEEEEEC
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh----hhhHHHHHHHHHHHHhcCCC-CC-CCcEEEEEEe
Confidence            3455 5678999999999999986 45 79999765332111    12457788899988865332 33 33333  345


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+...+||||++  +..|.+.+.+...+     ..++.+|...|..+|...
T Consensus        90 ~~~~~lv~E~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  138 (345)
T 1xjd_A           90 KENLFFVMEYLN--GGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG  138 (345)
T ss_dssp             SSEEEEEEECCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            677789999997  34676777653322     247788889999999753

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=96.42  E-value=0.023  Score=44.79  Aligned_cols=110  Identities=21%  Similarity=0.109  Sum_probs=73.7

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY  103 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~  103 (165)
                      ...+ -.+.+|.|....||++.+.      ++ .++||.......      .-...+...|.++|+.+.  .| ++++++
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~--hp-~iv~~~   92 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS------PSELRDLLSEFNVLKQVN--HP-HVIKLY   92 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCC------HHHHHHHHHHHHHHTTCC--CT-TBCCEE
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCC------HHHHHHHHHHHHHHhhCC--CC-ceeeEE
Confidence            3455 5577999999999999862      33 688998753221      122356677888776663  23 444555


Q ss_pred             EE--cCCCceEEEecCCCCchHHHHHHHcCCC------------------------C-----HHHHHHHHHHHHHHHhcc
Q 048614          104 HF--DRTMSLIGMRYLEPPHIILRKGLIAGIK------------------------Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       104 ~~--D~~~~~~vMEdL~~~~~~lr~~l~~g~~------------------------~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+  +.....+|||+++  +..|.+.+.....                        .     -.++.+|...|+.+|...
T Consensus        93 ~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  170 (314)
T 2ivs_A           93 GACSQDGPLLLIVEYAK--YGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK  170 (314)
T ss_dssp             EEECSSSSCEEEEECCT--TCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCCceEEEEeecC--CCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence            43  5667889999997  3477777765322                        1     257889999999999763

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=96.41  E-value=0.031  Score=43.71  Aligned_cols=111  Identities=19%  Similarity=0.075  Sum_probs=72.6

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCC----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF  105 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  105 (165)
                      .+.+ -.+.+|.|....||++....    + .++||.......      .-..++...|...|+.+.  -|..++-.-.+
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~   85 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS------DSVREKFLQEALTMRQFD--HPHIVKLIGVI   85 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS------HHHHHHHHHHHHHHHTCC--CTTBCCEEEEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCC------HHHHHHHHHHHHHHHhCC--CCccceEEEEE
Confidence            3445 46779999999999998742    2 488887653211      122356677888877663  24444333334


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +.....+|||+++  ...|.+.+....  ..    -.++.+|...|..+|...
T Consensus        86 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  136 (281)
T 1mp8_A           86 TENPVWIIMELCT--LGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR  136 (281)
T ss_dssp             CSSSCEEEEECCT--TEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCccEEEEecCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            5566789999997  457777776543  22    246788899999999753

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=96.41  E-value=0.0097  Score=49.57  Aligned_cols=105  Identities=14%  Similarity=0.049  Sum_probs=73.0

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CC--C
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RT--M  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~--~  109 (165)
                      -.+.+|.|....||++.+.. | .++||.-....      ..-..++...|+++|+.+..  | ++++++.+.  ..  .
T Consensus        13 i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~E~~~l~~l~h--p-nIv~~~~~~~~~~~~~   83 (396)
T 4eut_A           13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS------FLRPVDVQMREFEVLKKLNH--K-NIVKLFAIEEETTTRH   83 (396)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG------GGSCHHHHHHHHHHHHHCCC--T-TBCCEEEEEECTTTCC
T ss_pred             EEEEEEcCCCeEEEEEEECCCCcEEEEEEecccc------ccchHHHHHHHHHHHHhcCC--C-CCCeEEEeeccCCCCe
Confidence            56788999999999999873 5 79999765321      12345778889999988752  3 455555443  22  3


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC----CC----HHHHHHHHHHHHHHHhc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGI----KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~----~~----~~~a~~iG~~La~~h~~  151 (165)
                      ..+||||++  +..|.+.+....    ..    -.++.+|...|+.+|..
T Consensus        84 ~~lv~e~~~--~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  131 (396)
T 4eut_A           84 KVLIMEFCP--CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN  131 (396)
T ss_dssp             EEEEECCCT--TEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEecCC--CCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            489999997  457777765532    22    25778889999999965

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=96.39  E-value=0.022  Score=46.16  Aligned_cols=100  Identities=16%  Similarity=0.182  Sum_probs=70.1

Q ss_pred             EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEE
Q 048614           38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~v  113 (165)
                      +.||.|....||++.+. +| .++||.-...          ...+...|..+|+..... | ++++++.  .|.....+|
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----------~~~~~~~e~~~l~~l~~h-~-niv~~~~~~~~~~~~~lv   84 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR----------MEANTQKEITALKLCEGH-P-NIVKLHEVFHDQLHTFLV   84 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGG----------GHHHHHHHHHHHHHTTTC-T-TBCCEEEEEECSSEEEEE
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChh----------hhhhHHHHHHHHHHhcCC-C-CeeEEEEEEEcCCEEEEE
Confidence            57899999999999886 34 7999975322          225667788888877642 3 3444443  355667899


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ||+++  ...|.+.+..+...     -.++.+|...|+.+|..
T Consensus        85 ~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~  125 (325)
T 3kn6_A           85 MELLN--GGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV  125 (325)
T ss_dssp             ECCCC--SCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEccC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99997  34677777665533     25778888899999865

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=96.39  E-value=0.021  Score=46.35  Aligned_cols=108  Identities=17%  Similarity=0.168  Sum_probs=73.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -++.+|.|....||++... +| .++||.........    .-..++...|..+|+.+..  |. +.+++.  .|.....
T Consensus        10 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h--p~-Iv~~~~~~~~~~~~~   82 (318)
T 1fot_A           10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR----LKQVEHTNDERLMLSIVTH--PF-IIRMWGTFQDAQQIF   82 (318)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHSCCB--TT-BCCEEEEEECSSEEE
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHhhCCC--CC-CceEeEEEEeCCEEE
Confidence            5678999999999999886 45 79999865432211    1345677788888876532  43 444443  3556778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  ...|.+.+.....++     .++.+|...|..+|...
T Consensus        83 lv~e~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  126 (318)
T 1fot_A           83 MIMDYIE--GGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD  126 (318)
T ss_dssp             EEECCCC--SCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EEEeCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  346777776654332     36778888899999653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=96.39  E-value=0.02  Score=45.88  Aligned_cols=109  Identities=21%  Similarity=0.124  Sum_probs=71.7

Q ss_pred             CCcc-eeEecCCCceeEEEEEEe-----CCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVG-----SSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH  104 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~-----~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      ...+ -++.+|.|....||++..     ..+ .++||.-...-       .-..++...|+++|+.+.   ..++++++.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~---h~~i~~~~~   91 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-------PDQQRDFQREIQILKALH---SDFIVKYRG   91 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-------HHHHHHHHHHHHHHHTCC---CTTBCCEEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-------HHHHHHHHHHHHHHHhcC---CCceeEEEE
Confidence            3445 678899999999999983     244 79999754321       122356778888887763   334555544


Q ss_pred             --Ec--CCCceEEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 048614          105 --FD--RTMSLIGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 --~D--~~~~~~vMEdL~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                        ++  .....+|||+++  ...|.+.+..  +...    -.++.+|...|+.+|...
T Consensus        92 ~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  147 (327)
T 3lxl_A           92 VSYGPGRQSLRLVMEYLP--SGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR  147 (327)
T ss_dssp             EEECSSSCEEEEEEECCT--TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCCCceEEEEEeecC--CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              33  334669999997  3467776654  2222    256778889999999753

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=96.39  E-value=0.033  Score=43.79  Aligned_cols=105  Identities=12%  Similarity=0.073  Sum_probs=68.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -++.+|.|....||++.+. +| .++||......     .-.-...+...|.++|+.+..  | ++.+++.  .+.....
T Consensus         6 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~~~~~   77 (292)
T 3o0g_A            6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-----DDEGVPSSALREICLLKELKH--K-NIVRLHDVLHSDKKLT   77 (292)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC-----SSTTHHHHHHHHHHHHTTCCC--T-TBCCEEEEEEETTEEE
T ss_pred             eeeEecCCCCeEEEEEEECCCCceEEEEeeeccC-----CcCCcchHHHHHHHHHhcCCC--C-CEeeEEeEEEeCCEEE
Confidence            4678999999999999986 34 79999764221     112233566778888876642  3 3444444  3566778


Q ss_pred             EEEecCCCCchHHHHHHHc--CCCCH----HHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIA--GIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~--g~~~~----~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  . .+.+.+..  +....    .++.+|...|+.+|..
T Consensus        78 lv~e~~~--~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~  120 (292)
T 3o0g_A           78 LVFEFCD--Q-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR  120 (292)
T ss_dssp             EEEECCS--E-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecCC--C-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999998  3 33344433  23322    4677888899999976

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=96.37  E-value=0.026  Score=47.14  Aligned_cols=101  Identities=18%  Similarity=0.198  Sum_probs=68.3

Q ss_pred             eeEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCC
Q 048614           36 TIKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~  108 (165)
                      -.+.||.|..-.||++.+.    .+ .|.||.-.+.         -...|...|.++|+..... |.. .++  .+.+.+
T Consensus        25 i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~---------~~~~~~~~E~~~l~~~~~h-~nI-v~l~~~~~~~~   93 (361)
T 4f9c_A           25 IEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT---------SHPIRIAAELQCLTVAGGQ-DNV-MGVKYCFRKND   93 (361)
T ss_dssp             EEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT---------SCHHHHHHHHHHHHHTCSB-TTB-CCCSEEEEETT
T ss_pred             EEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc---------cCHHHHHHHHHHHHHhcCC-CCC-ceEEEEEEECC
Confidence            4578999999999999753    23 6888864321         2346888899999876433 332 222  234667


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      ...+||||++  +..|.+.+.  ...    ..++.+|...|.-+|..
T Consensus        94 ~~~lvmE~~~--g~~L~~~~~--~l~~~~~~~~~~qll~al~ylH~~  136 (361)
T 4f9c_A           94 HVVIAMPYLE--HESFLDILN--SLSFQEVREYMLNLFKALKRIHQF  136 (361)
T ss_dssp             EEEEEEECCC--CCCHHHHHT--TCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEeCCC--cccHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            7789999997  346666552  222    25677888888888865

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=96.37  E-value=0.01  Score=47.82  Aligned_cols=110  Identities=16%  Similarity=0.003  Sum_probs=70.8

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC-CC-e----EEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS-SG-S----FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH  104 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g-s----vIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      ..++ .++.+|.|....||++... +| .    +++|.....      ...-...+...|...|+.+.  -| ++++++.
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~------~~~~~~~~~~~e~~~l~~l~--h~-~iv~~~~   82 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK------SGRQSFQAVTDHMLAIGSLD--HA-HIVRLLG   82 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCT------TSCSCBCSCCHHHHHHHTCC--CT-TBCCEEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccc------ccHHHHHHHHHHHHHHhcCC--CC-CcCeEEE
Confidence            3455 6788999999999999865 33 3    566654311      12233346667777776553  13 3445554


Q ss_pred             E-cCCCceEEEecCCCCchHHHHHHHcC--CC----CHHHHHHHHHHHHHHHhcc
Q 048614          105 F-DRTMSLIGMRYLEPPHIILRKGLIAG--IK----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~-D~~~~~~vMEdL~~~~~~lr~~l~~g--~~----~~~~a~~iG~~La~~h~~t  152 (165)
                      + ......+||||++  ...|.+.+...  ..    .-.++.+|...|..+|...
T Consensus        83 ~~~~~~~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  135 (325)
T 3kex_A           83 LCPGSSLQLVTQYLP--LGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG  135 (325)
T ss_dssp             EECBSSEEEEEECCT--TCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEcCCccEEEEEeCC--CCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4 4556679999998  34666766653  21    2367788999999999763

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=96.37  E-value=0.039  Score=43.28  Aligned_cols=109  Identities=14%  Similarity=0.071  Sum_probs=73.2

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFD  106 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D  106 (165)
                      .+.+ -+..+|.|....||++.+.. | .+++|......       .-..++...|.+.|+.+.  .|. +++++  +.+
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~e~~~l~~l~--h~~-i~~~~~~~~~   87 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-------EEELEDYIVEIEILATCD--HPY-IVKLLGAYYH   87 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----------CCHHHHHHHHHHHHHCC--CTT-BCCEEEEEEC
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-------HHHHHHHHHHHHHHhcCC--CCC-Eeeeeeeeee
Confidence            4455 56789999999999999873 4 78888754321       234578888998887763  244 34444  346


Q ss_pred             CCCceEEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+|||+++  ...|.+.+..  +...    -.++.+|...|+.+|...
T Consensus        88 ~~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  137 (302)
T 2j7t_A           88 DGKLWIMIEFCP--GGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR  137 (302)
T ss_dssp             C-CEEEEEECCT--TEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCeEEEEEEeCC--CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            677889999997  3466666554  2222    257788889999999763

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=96.37  E-value=0.019  Score=47.19  Aligned_cols=112  Identities=10%  Similarity=0.022  Sum_probs=73.3

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      +++ -++.+|.|....||++... +| .++||........    -.-...+...|..+|+..... |. +++++.  .+.
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~E~~~l~~~~~h-p~-iv~l~~~~~~~   82 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVN----DDEDIDWVQTEKHVFEQASNH-PF-LVGLHSCFQTE   82 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSC----SHHHHHHHHHHHHHHHHTTTC-TT-BCCEEEEEECS
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhc----chHHHHHHHHHHHHHHhcCCC-Cc-cCeEEEEEEeC
Confidence            344 5678999999999999986 34 7888976533211    012235677788888765332 43 333433  366


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ....+||||++  ...|.+.+.+.... .    .++.+|...|..+|...
T Consensus        83 ~~~~lv~e~~~--gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~  130 (345)
T 3a8x_A           83 SRLFFVIEYVN--GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG  130 (345)
T ss_dssp             SEEEEEECCCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            77889999997  34666666553322 2    46778888999999753

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=96.37  E-value=0.028  Score=44.28  Aligned_cols=104  Identities=17%  Similarity=0.204  Sum_probs=66.9

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--------
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--------  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--------  105 (165)
                      .++.+|.|....||++.+.. | .++||.-...-       +-..++...|.++|+.+..  |. +.+++.+        
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~e~~~l~~l~h--~~-iv~~~~~~~~~~~~~   84 (320)
T 2i6l_A           15 DLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-------PQSVKHALREIKIIRRLDH--DN-IVKVFEILGPSGSQL   84 (320)
T ss_dssp             EEEECC-----CEEEEEETTTTEEEEEEEEECCS-------HHHHHHHHHHHHHHHTCCC--TT-BCCEEEEECTTSCBC
T ss_pred             EEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-------hHHHHHHHHHHHHHHhcCC--CC-eeEEEEecccccccc
Confidence            67889999999999999874 5 89999653211       1223566778888876632  33 3444433        


Q ss_pred             --------cCCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          106 --------DRTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 --------D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                              +.....+|||+++  . .|.+.+.++....    .++.+|...|+.+|...
T Consensus        85 ~~~~~~~~~~~~~~lv~e~~~--~-~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  140 (320)
T 2i6l_A           85 TDDVGSLTELNSVYIVQEYME--T-DLANVLEQGPLLEEHARLFMYQLLRGLKYIHSAN  140 (320)
T ss_dssp             CC----CCSCSEEEEEEECCS--E-EHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccccccccCceeEEeeccC--C-CHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence                    3356679999997  3 6888777665443    46778888999999653

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=96.36  E-value=0.019  Score=47.30  Aligned_cols=111  Identities=17%  Similarity=0.117  Sum_probs=74.4

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      +++ .++.+|.|....||++... +| .++||.-.......    .-..++...|.++|+.+.  .|. +++++.  .|.
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~--hp~-iv~~~~~~~~~  113 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK----LKQIEHTLNEKRILQAVN--FPF-LVKLEFSFKDN  113 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHTTCC--CTT-BCCEEEEEECS
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhcc----HHHHHHHHHHHHHHHhCC--CCC-CCeEEEEEEcC
Confidence            345 6788999999999999976 45 79999764332111    123567888888887652  233 344443  355


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ....+||||++  ...|.+.+.+...+     -.++.+|...|..+|...
T Consensus       114 ~~~~lv~e~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  161 (350)
T 1rdq_E          114 SNLYMVMEYVA--GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD  161 (350)
T ss_dssp             SEEEEEEECCT--TCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEcCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            67789999997  34676777653322     246788888999999753

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=96.35  E-value=0.016  Score=47.49  Aligned_cols=109  Identities=17%  Similarity=0.170  Sum_probs=72.7

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -.+.+|.|..-.||++.+. +| .++||.-...-..  ..-....++...|..+|+.+..  | ++++++.  .+.....
T Consensus        28 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~~E~~~l~~l~h--p-nIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFT--SSPGLSTEDLKREASICHMLKH--P-HIVELLETYSSDGMLY  102 (351)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--TSSSCCHHHHHHHHHHHHHCCC--T-TBCCEEEEEEETTEEE
T ss_pred             EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhcc--ccccchHHHHHHHHHHHHhCCC--C-CCCcEEEEEEeCCEEE
Confidence            4578999999999999876 45 7999976432211  1223566788899999987742  4 3444443  3556678


Q ss_pred             EEEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  ...|.+.+.+    +..+     ..++.+|...|..+|..
T Consensus       103 lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~  149 (351)
T 3c0i_A          103 MVFEFMD--GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN  149 (351)
T ss_dssp             EEEECCS--SCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeCCC--CCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  2355444433    2222     24677889999999975

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=96.34  E-value=0.018  Score=44.83  Aligned_cols=106  Identities=15%  Similarity=0.128  Sum_probs=70.4

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      -.+.+|.|....||++.+. +| .++||.-......     .-...+...|+++|+.+..  | ++++++.+  +.....
T Consensus        10 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~   81 (284)
T 3kk8_A           10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-----ARDFQKLEREARICRKLQH--P-NIVRLHDSIQEESFHY   81 (284)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-----HHHHHHHHHHHHHHHHCCC--T-TBCCEEEEEECSSEEE
T ss_pred             hhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC-----HHHHHHHHHHHHHHHHcCC--C-CcCeEEEEEEcCCEEE
Confidence            5678999999999999876 34 7888975432211     1123566778888887742  3 34455543  444558


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++ + ..|.+.+..+...     -.++.+|...|+.+|..
T Consensus        82 ~v~e~~~-~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  124 (284)
T 3kk8_A           82 LVFDLVT-G-GELFEDIVAREFYSEADASHCIQQILESIAYCHSN  124 (284)
T ss_dssp             EEECCCC-S-CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecCC-C-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997 3 3565666554432     25778888999999965

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=96.34  E-value=0.028  Score=44.58  Aligned_cols=107  Identities=12%  Similarity=0.041  Sum_probs=73.2

Q ss_pred             cc-eeEecCCCceeEEEEEEeC--CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCC---CCceEEE--
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPD---HVPEVYH--  104 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~---~vP~v~~--  104 (165)
                      .+ -++.+|.|....||++.+.  +| .++||.-...-        -..++...|.++|+.+....+.   .+++++.  
T Consensus        15 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~   86 (339)
T 1z57_A           15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD--------RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF   86 (339)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH--------HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE
T ss_pred             ceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC--------chhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc
Confidence            44 5678999999999999873  45 79999764221        1236778899999888664322   3455554  


Q ss_pred             EcCCCceEEEecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhc
Q 048614          105 FDRTMSLIGMRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       105 ~D~~~~~~vMEdL~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~  151 (165)
                      .+.....+|||+++.   .+.+.+....  ..     -.++.+|...|+.+|..
T Consensus        87 ~~~~~~~lv~e~~~~---~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  137 (339)
T 1z57_A           87 EHHGHICIVFELLGL---STYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN  137 (339)
T ss_dssp             EETTEEEEEEECCCC---BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccCCcEEEEEcCCCC---CHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence            355677899999962   4556665543  11     25788889999999965

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=96.33  E-value=0.033  Score=47.35  Aligned_cols=103  Identities=13%  Similarity=0.037  Sum_probs=72.5

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC-CceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT-MSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~-~~~~  112 (165)
                      -.+.+|.|....||++...+..++||....-         ...++...|+++|+.+..  |. +.+++.+  +.+ ...+
T Consensus       197 ~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~---------~~~~~~~~E~~~l~~l~h--~n-iv~~~~~~~~~~~~~~i  264 (450)
T 1k9a_A          197 LLQTIGKGEFGDVMLGDYRGNKVAVKCIKND---------ATAQAFLAEASVMTQLRH--SN-LVQLLGVIVEEKGGLYI  264 (450)
T ss_dssp             EEEEEEECSSEEEEEEEETTEEEEEEEESSC---------TTSHHHHHHHHHHHTCCC--TT-BCCEEEEEECTTSCEEE
T ss_pred             EEeeecCcCCeeEEEEEecCCeEEEEEeCCc---------hHHHHHHHHHHHHHhccC--CC-EEEEEEEEEcCCCceEE
Confidence            4678999999999999887448999976421         144678889999987742  43 4445543  443 5689


Q ss_pred             EEecCCCCchHHHHHHHcCCC---C----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIK---Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~---~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...|.+.+.+...   .    -.++.+|...|+.+|...
T Consensus       265 v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  309 (450)
T 1k9a_A          265 VTEYMA--KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN  309 (450)
T ss_dssp             EEECCT--TCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecC--CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997  3467777765321   1    257889999999999753

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=96.33  E-value=0.019  Score=45.55  Aligned_cols=108  Identities=16%  Similarity=0.197  Sum_probs=69.6

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc---
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD---  106 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D---  106 (165)
                      ..+ -++.+|.|....||++.+. +| .++||.-...-       .-..++...|+++|+.+..  | ++++++.+.   
T Consensus        29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~   98 (317)
T 2buj_A           29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-------QQDREEAQREADMHRLFNH--P-NILRLVAYCLRE   98 (317)
T ss_dssp             EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-------HHHHHHHHHHHHHHHTCCC--T-TBCCCCEEEEEE
T ss_pred             eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-------HHHHHHHHHHHHHHhhcCC--C-CeeeEEEEEEec
Confidence            344 6788999999999999974 45 89999753211       1234567778888876632  3 445555442   


Q ss_pred             ---CCCceEEEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          107 ---RTMSLIGMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ---~~~~~~vMEdL~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                         .....+|||++.  ...|.+.+..    +...     -.++.+|...|+.+|...
T Consensus        99 ~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  154 (317)
T 2buj_A           99 RGAKHEAWLLLPFFK--RGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG  154 (317)
T ss_dssp             ETTEEEEEEEEECCT--TCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCceeEEEEEeCC--CCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence               345679999998  3466665554    2322     247888899999999763

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=96.33  E-value=0.023  Score=48.70  Aligned_cols=106  Identities=16%  Similarity=0.198  Sum_probs=68.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      -++.||.|....||++.+. ++ .++||........     .-...+...|.++|+.+..  |. +++++.+  +.....
T Consensus        41 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--pn-iv~~~~~~~~~~~~~  112 (494)
T 3lij_A           41 RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS-----TSSNSKLLEEVAVLKLLDH--PN-IMKLYDFFEDKRNYY  112 (494)
T ss_dssp             EEEEEECC---EEEEEEETTTCCEEEEEEEEC----------CTTHHHHHHHHHHTTCCC--TT-BCCEEEEEECSSEEE
T ss_pred             EeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC-----chHHHHHHHHHHHHHhCCC--CC-CCeEEEEEEeCCEEE
Confidence            5788999999999999986 44 7888876533221     1235678889888876642  43 4444443  556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +||||++ +. .|.+.+.....+     ..++.+|...|+.+|..
T Consensus       113 lv~e~~~-~g-~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  155 (494)
T 3lij_A          113 LVMECYK-GG-ELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH  155 (494)
T ss_dssp             EEEECCC-SC-BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecCC-CC-cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999998 33 555555554332     24778888999999965

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=96.32  E-value=0.036  Score=44.77  Aligned_cols=103  Identities=9%  Similarity=0.043  Sum_probs=71.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -.+.+|.|....||++.+. +| .+++|.....        ....++...|..+|+.+..  |. +++++.  .+.+...
T Consensus         9 ~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--------~~~~~~~~~E~~~l~~l~h--pn-Iv~~~~~~~~~~~~~   77 (321)
T 1tki_A            9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK--------GTDQVLVKKEISILNIARH--RN-ILHLHESFESMEELV   77 (321)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--------THHHHHHHHHHHHHHHSCC--TT-BCCEEEEEEETTEEE
T ss_pred             eeeEEecCCCeEEEEEEECCCCcEEEEEEEecC--------cccHHHHHHHHHHHHhCCC--CC-CCeEeEEEecCCEEE
Confidence            4678999999999999886 34 7888875421        1223566778888876642  33 444443  4667788


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  +..|.+.+.... .+     -.++.+|...|..+|..
T Consensus        78 lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~  121 (321)
T 1tki_A           78 MIFEFIS--GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH  121 (321)
T ss_dssp             EEECCCC--CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  347777776543 22     25778889999999975

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=96.31  E-value=0.012  Score=47.30  Aligned_cols=116  Identities=13%  Similarity=-0.029  Sum_probs=77.3

Q ss_pred             cc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT  108 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~  108 (165)
                      .+ -.+.+|.|....||++.+. +| .++||........ .........|...|.++|+.+..-.|. +++++.  .+++
T Consensus        44 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~E~~~l~~l~~~~~~-i~~~~~~~~~~~  121 (320)
T 3a99_A           44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPNGTRVPMEVVLLKKVSSGFSG-VIRLLDWFERPD  121 (320)
T ss_dssp             TEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCC-CEEECTTCCEEEHHHHHHHHHCSSSCS-BCCEEEEEECSS
T ss_pred             ceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccch-hhhhhhhhhHHHHHHHHHHhhccCCCC-ceEEEEEEecCC
Confidence            44 6788999999999999875 45 7999986543321 001112345777899999888653343 333333  3557


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ...++||++. ....|.+.+...... .    .++.+|...|+.+|...
T Consensus       122 ~~~lv~e~~~-~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~  169 (320)
T 3a99_A          122 SFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG  169 (320)
T ss_dssp             EEEEEEECCS-SEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cEEEEEEcCC-CCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7889999997 456777777654332 2    46778888999888653

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=96.31  E-value=0.033  Score=43.69  Aligned_cols=107  Identities=11%  Similarity=0.065  Sum_probs=73.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -++.+|.|....||++.+. ++ .++||........     .-..++...|.++|+.+..  |. +++++.  .+.....
T Consensus        26 i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-----~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~   97 (287)
T 2wei_A           26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-----NKDTSTILREVELLKKLDH--PN-IMKLFEILEDSSSFY   97 (287)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-----SSCHHHHHHHHHHHHTCCC--TT-BCCEEEEEECSSEEE
T ss_pred             eeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-----hHHHHHHHHHHHHHHhccC--CC-ccEEEEEEeCCCeEE
Confidence            5678899999999999986 44 8999986533221     2456788889998887632  33 444443  3556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+......     -.++.+|...|..+|...
T Consensus        98 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  141 (287)
T 2wei_A           98 IVGELYT--GGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN  141 (287)
T ss_dssp             EEECCCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEccC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  34565665543322     257788888999998753

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=96.30  E-value=0.038  Score=43.29  Aligned_cols=116  Identities=11%  Similarity=0.062  Sum_probs=72.8

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCcccccc--CCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCI--GESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--  105 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~--~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--  105 (165)
                      +.+ ..+.+|.|....||++.+. +| .++||.....-...  ..+.....++...|.++|+.+... | ++++++.+  
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h-~-~i~~~~~~~~   94 (298)
T 1phk_A           17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH-P-NIIQLKDTYE   94 (298)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTC-T-TBCCEEEEEE
T ss_pred             hccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCC-C-CEeeeeeeec
Confidence            344 5678999999999999986 45 79999864322100  000011134566777777776432 3 34444443  


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +.....+|||+++  ...|.+.+..+...     -.++.+|...|..+|...
T Consensus        95 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  144 (298)
T 1phk_A           95 TNTFFFLVFDLMK--KGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN  144 (298)
T ss_dssp             CSSEEEEEEECCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCeEEEEEeccC--CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4455789999997  34677777654322     257788888888898763

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=96.30  E-value=0.019  Score=47.09  Aligned_cols=102  Identities=15%  Similarity=0.078  Sum_probs=66.3

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -.+.+|.|....||++.+.. + .++||.-...         ...++...|.++|+.+..  | ++++++.  .+.....
T Consensus        57 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~---------~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~  124 (349)
T 2w4o_A           57 VESELGRGATSIVYRCKQKGTQKPYALKVLKKT---------VDKKIVRTEIGVLLRLSH--P-NIIKLKEIFETPTEIS  124 (349)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------------CHHHHHCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc---------hhHHHHHHHHHHHHhCCC--C-CCcceeeeEecCCeEE
Confidence            45789999999999999873 4 7999975421         123566778888887752  3 3444443  3556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +||||++  ...|.+.+......     -.++.+|...|..+|..
T Consensus       125 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~  167 (349)
T 2w4o_A          125 LVLELVT--GGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN  167 (349)
T ss_dssp             EEECCCC--SCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  34677777665432     25778888899999975

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=96.29  E-value=0.028  Score=47.83  Aligned_cols=108  Identities=15%  Similarity=0.153  Sum_probs=75.2

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      -.+.+|.|....||++.+. +| .++||.-....    ..-....++...|.++|+.+..  | ++++++.+  +.....
T Consensus        30 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~~~~~~~~E~~~l~~l~h--p-niv~~~~~~~~~~~~~  102 (484)
T 3nyv_A           30 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ----VKQKTDKESLLREVQLLKQLDH--P-NIMKLYEFFEDKGYFY  102 (484)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT----CCBSSCHHHHHHHHHHHTTCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhh----cccchHHHHHHHHHHHHHhCCC--C-CCCcEEEEEEeCCEEE
Confidence            4678999999999999986 45 79999753221    1113456788889998877632  3 44555544  556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++.  ...|.+.+.....+     -.++.+|...|+.+|...
T Consensus       103 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  146 (484)
T 3nyv_A          103 LVGEVYT--GGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK  146 (484)
T ss_dssp             EEECCCC--SCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  34666777665543     247888899999999753

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=96.29  E-value=0.015  Score=46.08  Aligned_cols=114  Identities=11%  Similarity=-0.059  Sum_probs=70.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccC-CCCCceEEEE--cCCCc
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLC-PDHVPEVYHF--DRTMS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~-p~~vP~v~~~--D~~~~  110 (165)
                      -.+.+|.|....||++.+. +| .++||.-...-.. .........+...|...|+.+.... -.++++++.+  +.+..
T Consensus        35 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~  113 (312)
T 2iwi_A           35 LGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVL-GWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGF  113 (312)
T ss_dssp             EEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC---------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----C
T ss_pred             EeeEEEcCCCEEEEEEEEccCCeEEEEEEEeccccc-ccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeE
Confidence            5678999999999999875 44 7999986533211 0111123445667888888875421 2345555544  56788


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      .+|||+.- ....|.+.+.+....     -.++.+|...|..+|..
T Consensus       114 ~~v~e~~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~  158 (312)
T 2iwi_A          114 MLVLERPL-PAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR  158 (312)
T ss_dssp             EEEEECCS-SEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEecC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999943 256787877664432     25788889999999975

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=96.29  E-value=0.011  Score=48.29  Aligned_cols=109  Identities=17%  Similarity=0.126  Sum_probs=70.0

Q ss_pred             CCcce-eEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE
Q 048614           32 FDALT-IKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY  103 (165)
Q Consensus        32 ~~~~~-v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~  103 (165)
                      .+++. .++||.|..-.||++...      +| .|.||.-..-.       .-..++...|+++|+.+.-  | ++-++|
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-------~~~~~~f~~E~~il~~l~H--p-nIV~l~   81 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-------DNARKDFHREAELLTNLQH--E-HIVKFY   81 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-------HHHHHHHHHHHHHHTTCCC--T-TBCCEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-------hHHHHHHHHHHHHHHhCCC--C-CCccEE
Confidence            34553 467999999999999753      34 68888743211       1123456678888866532  3 444555


Q ss_pred             EE--cCCCceEEEecCCCCchHHHHHHHcCC--------------CC----HHHHHHHHHHHHHHHhcc
Q 048614          104 HF--DRTMSLIGMRYLEPPHIILRKGLIAGI--------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       104 ~~--D~~~~~~vMEdL~~~~~~lr~~l~~g~--------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .+  +.+...+||||++  ..+|++.|.+..              ..    -.++.+|+..|+-+|...
T Consensus        82 g~~~~~~~~~lV~Ey~~--~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~  148 (299)
T 4asz_A           82 GVCVEGDPLIMVFEYMK--HGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH  148 (299)
T ss_dssp             EEECSSSSEEEEEECCT--TCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeeCCEEEEEEEcCC--CCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            54  5567789999998  457888876421              11    258899999999999653

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=96.28  E-value=0.04  Score=43.27  Aligned_cols=106  Identities=16%  Similarity=0.132  Sum_probs=72.2

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~  112 (165)
                      -++.+|.|....||++.+..| .++||........     .-...+...|.++|+.+..  | ++++++.  .+.....+
T Consensus         6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~~~~~l   77 (288)
T 1ob3_A            6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED-----EGIPSTTIREISILKELKH--S-NIVKLYDVIHTKKRLVL   77 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG-----GCCCHHHHHHHHGGGGCCC--T-TBCCEEEEEECSSCEEE
T ss_pred             hhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc-----cccchhHHHHHHHHHhcCC--C-CEeeeeeEEccCCeEEE
Confidence            467899999999999998766 8999976533211     1223567778888876642  3 4444444  34567789


Q ss_pred             EEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  . .|.+.+...  ...    ..++.+|...|+.+|...
T Consensus        78 v~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (288)
T 1ob3_A           78 VFEHLD--Q-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR  120 (288)
T ss_dssp             EEECCS--E-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecC--C-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  3 676766652  222    257788899999999753

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=96.28  E-value=0.0098  Score=52.75  Aligned_cols=68  Identities=16%  Similarity=0.019  Sum_probs=51.6

Q ss_pred             HHHHHHHHHHhhccCCCCCceEEEEc--CCCceEEEecCCCCchHHHHHHHcCCCC--HHHHHHHHHHHHHHHhcc
Q 048614           81 AYFEALALKEHGQLCPDHVPEVYHFD--RTMSLIGMRYLEPPHIILRKGLIAGIKY--PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        81 ~~~E~~~L~~~~~~~p~~vP~v~~~D--~~~~~~vMEdL~~~~~~lr~~l~~g~~~--~~~a~~iG~~La~~h~~t  152 (165)
                      .+.|+++|+....  ...+|+++.|-  ....-+||||++  +..|.+.|.++...  ..+..+|...|+-+|...
T Consensus       288 ~~~E~~~l~~~~~--~~~i~~~~~~~ed~~~~yLVMEyv~--G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~G  359 (569)
T 4azs_A          288 LHNEIKFLTQPPA--GFDAPAVLAHGENAQSGWLVMEKLP--GRLLSDMLAAGEEIDREKILGSLLRSLAALEKQG  359 (569)
T ss_dssp             HHHHHHHHHSCCT--TCCCCCEEEEEECSSEEEEEEECCC--SEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCC--CCCeeEEEEEEEECCEEEEEEecCC--CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCC
Confidence            4456666665533  45789987764  555789999998  57999999887654  379999999999999764

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=96.28  E-value=0.029  Score=47.44  Aligned_cols=109  Identities=9%  Similarity=0.009  Sum_probs=71.6

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -++.||.|..-.||++.... + .+.||........    -.-...+...|..+|+..... |. +++++.  .+.+...
T Consensus        56 ~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~----~~~~~~~~~~E~~il~~~~~h-p~-Iv~l~~~~~~~~~~~  129 (396)
T 4dc2_A           56 LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN----DDEDIDWVQTEKHVFEQASNH-PF-LVGLHSCFQTESRLF  129 (396)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC--------CCHHHHHHHHHHHHTTC-TT-BCCEEEEEECSSEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc----CHHHHHHHHHHHHHHHhcCCC-CC-cCeeEEEEEECCEEE
Confidence            56789999999999998764 4 6888876533211    112345678898888766432 43 333443  3666778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  ...|...+.+...+ .    .++.+|...|..+|...
T Consensus       130 lV~E~~~--gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~g  173 (396)
T 4dc2_A          130 FVIEYVN--GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG  173 (396)
T ss_dssp             EEEECCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEcCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  33666666554332 2    46778888899999753

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=96.26  E-value=0.015  Score=46.50  Aligned_cols=107  Identities=17%  Similarity=0.051  Sum_probs=68.5

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-----
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-----  105 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-----  105 (165)
                      .+++ -.+.+|.|....||++...+..++||.-...          ...+...|.++++. ..+--..+.+++.+     
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----------~~~~~~~e~~~~~~-~~~~h~~i~~~~~~~~~~~   80 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFA----------NRQNFINEKNIYRV-PLMEHDNIARFIVGDERVT   80 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGG----------GHHHHHHHHHHHTS-TTCCCTTBCCEEEEEEEEC
T ss_pred             hHHhheeeecccCCCeEEEEEEECCeEEEEEEeecc----------chhhHHHHHHHHHH-HhccCcchhhheecccccc
Confidence            4455 6788999999999999876448999975311          12344555555432 22222334444431     


Q ss_pred             cC--CCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhc
Q 048614          106 DR--TMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       106 D~--~~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      ..  ....+||||++  ..+|++.+......    -.++.+|...|+-+|..
T Consensus        81 ~~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~  130 (336)
T 3g2f_A           81 ADGRMEYLLVMEYYP--NGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTE  130 (336)
T ss_dssp             TTSCEEEEEEECCCT--TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             cCCCceEEEEEecCC--CCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhh
Confidence            11  13479999997  35788877665543    25788999999999976

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=96.25  E-value=0.021  Score=44.94  Aligned_cols=109  Identities=17%  Similarity=0.035  Sum_probs=72.4

Q ss_pred             CCcc-eeEecCCCceeEEEEEEe----C-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVG----S-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH  104 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~----~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      ...+ -++.+|.|....||++..    . +| .++||.-....       .-...+...|.++|+.+..  | ++++++.
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h--~-~iv~~~~   78 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-------EEHLRDFEREIEILKSLQH--D-NIVKYKG   78 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-------HHHHHHHHHHHHHHHTCCC--T-TBCCEEE
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-------HHHHHHHHHHHHHHHhCCC--C-CEeeEEE
Confidence            3445 578899999999999973    2 44 79999754221       1123466778888877742  3 4445554


Q ss_pred             E--c--CCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          105 F--D--RTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~--D--~~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +  +  .....+|||+++  ..+|.+.+....  ..    -.++.+|...|+.+|...
T Consensus        79 ~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  134 (295)
T 3ugc_A           79 VCYSAGRRNLKLIMEYLP--YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR  134 (295)
T ss_dssp             EECHHHHTSCEEEEECCT--TCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCCCCceEEEEEeCC--CCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence            3  2  244689999997  347777776533  22    247788999999999754

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=96.25  E-value=0.03  Score=45.94  Aligned_cols=108  Identities=14%  Similarity=0.065  Sum_probs=73.2

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      -++.+|.|....||++... +| .++||.-.......    .-...+...|..+|+...  .|. +++++  +.+.+...
T Consensus         9 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~--hp~-iv~l~~~~~~~~~~~   81 (337)
T 1o6l_A            9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA----KDEVAHTVTESRVLQNTR--HPF-LTALKYAFQTHDRLC   81 (337)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHSCC--CTT-BCCEEEEEECSSEEE
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhh----hhHHHHHHHHHHHHHhCC--CCc-CcceEEEEEeCCEEE
Confidence            5678999999999999876 45 79999865432211    134567888988887653  243 33333  34556778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|...+.....+ .    .++.+|...|..+|...
T Consensus        82 lv~E~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  125 (337)
T 1o6l_A           82 FVMEYAN--GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD  125 (337)
T ss_dssp             EEEECCT--TCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  34666666654433 2    46778888999999753

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=96.25  E-value=0.012  Score=49.59  Aligned_cols=112  Identities=15%  Similarity=0.018  Sum_probs=71.9

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCcccccc-CCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCI-GESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~-~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~  112 (165)
                      -.+.+|.|..-.||++.+.. + .++||.-....... .....-...+...|.++|+.+..  |..+.-.-+++.+...+
T Consensus       139 ~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--pniv~l~~~~~~~~~~l  216 (419)
T 3i6u_A          139 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH--PCIIKIKNFFDAEDYYI  216 (419)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCC--TTBCCCCEEEESSEEEE
T ss_pred             EEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCC--CCEeeEEEEEecCceEE
Confidence            45678999999999998763 4 78999765332110 01112223356789999988743  55444444567778899


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~  151 (165)
                      |||+++ + ..|.+.+...... .    .++.+|...|+.+|..
T Consensus       217 v~e~~~-~-g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~  258 (419)
T 3i6u_A          217 VLELME-G-GELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN  258 (419)
T ss_dssp             EEECCT-T-CBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEcCC-C-CcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999997 3 3565655554433 2    4677888999999965

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=96.25  E-value=0.042  Score=45.31  Aligned_cols=107  Identities=15%  Similarity=0.236  Sum_probs=65.0

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE----cCCC
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF----DRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~----D~~~  109 (165)
                      -++.+|.|....||++.+. +| .++||.-.....     -.....|...|..+|+.+... | ++++++.+    +...
T Consensus        13 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~-----~~~~~~~~~~E~~~l~~l~~h-~-niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A           13 LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ-----NSTDAQRTFREIMILTELSGH-E-NIVNLLNVLRADNDRD   85 (388)
T ss_dssp             EEEC-------CEEEEEETTTCCEEEEEEECC--C-----CHHHHHHHHHHHHHHHHTTTC-T-TBCCEEEEEECTTSSC
T ss_pred             EEEEeeeCCCeEEEEEEECCCCCEEEEEEeccccc-----ChHHHHHHHHHHHHHHhccCC-C-CCCeeeeEEecCCCCE
Confidence            4578999999999999876 45 799997542221     123456777888888777532 3 34444443    2224


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++  . .|.+.+..+...+    .++.+|...|.-+|...
T Consensus        86 ~~lv~e~~~--~-~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  129 (388)
T 3oz6_A           86 VYLVFDYME--T-DLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG  129 (388)
T ss_dssp             EEEEEECCS--E-EHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecccC--c-CHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            689999997  2 5777776665443    46678889999999653

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=96.23  E-value=0.042  Score=43.40  Aligned_cols=104  Identities=14%  Similarity=0.121  Sum_probs=68.9

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -.+.+|.|....||++.+. +| .++||.......       ...++...|.++|+.+..  |. +++++.  .+.....
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~   82 (304)
T 2jam_A           13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-------FRDSSLENEIAVLKKIKH--EN-IVTLEDIYESTTHYY   82 (304)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------------HHHHHHHHHHHCCC--TT-BCCEEEEEECSSEEE
T ss_pred             eeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-------cchHHHHHHHHHHHhCCC--CC-eeehhhhcccCCEEE
Confidence            5678999999999999986 45 799997652211       123567788888887742  33 344443  3556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  ...|.+.+......     -.++.+|...|..+|..
T Consensus        83 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~  125 (304)
T 2jam_A           83 LVMQLVS--GGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN  125 (304)
T ss_dssp             EEECCCC--SCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCC--CccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  34666666543332     24778888889989875

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=96.22  E-value=0.032  Score=46.91  Aligned_cols=112  Identities=15%  Similarity=0.112  Sum_probs=76.8

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HFDRT  108 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~~  108 (165)
                      +++ -++.+|.|....||++.... | .++||.-....-..    .-...+...|.++|+.+..  |..++-.. +.|.+
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~----~~~~~~~~~E~~il~~l~h--p~Iv~l~~~~~~~~   88 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE----RNEVRNVFKELQIMQGLEH--PFLVNLWYSFQDEE   88 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHTCCC--TTBCCEEEEEECSS
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhccc----HHHHHHHHHHHHHHHhCCC--CCCCcEEEEEEeCC
Confidence            445 56889999999999998764 4 68888754322111    1245677889999887632  44444333 33667


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||++.  +..|+..+..+..++     .++.+|...|..+|...
T Consensus        89 ~~~lv~e~~~--gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~g  135 (384)
T 4fr4_A           89 DMFMVVDLLL--GGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQR  135 (384)
T ss_dssp             EEEEEECCCT--TEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7889999997  457888887765432     46778889999999753

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=96.22  E-value=0.036  Score=43.85  Aligned_cols=111  Identities=14%  Similarity=0.080  Sum_probs=69.6

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      ..+ -.+.+|.|....||++.+. +| .++||.-...-..    -.-...+...|...|+.+..  | ++++++.  .+.
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~  104 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLM----DAKARADCIKEIDLLKQLNH--P-NVIKYYASFIED  104 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSC----CHHHHHHHHHHHHHHHTCCC--T-TBCCEEEEEEET
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhcc----CHHHHHHHHHHHHHHHhCCC--C-CEeeEEEEEEcC
Confidence            345 4578999999999999875 45 8999976532110    01223566677777776632  3 3444443  356


Q ss_pred             CCceEEEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ....+|||+++  ...|.+.+..    +...     -.++.+|...|..+|...
T Consensus       105 ~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  156 (310)
T 2wqm_A          105 NELNIVLELAD--AGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR  156 (310)
T ss_dssp             TEEEEEEECCC--SCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CcEEEEEecCC--CCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            67789999997  3356555542    2222     257788899999999753

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=96.22  E-value=0.043  Score=49.15  Aligned_cols=106  Identities=20%  Similarity=0.035  Sum_probs=74.2

Q ss_pred             EecCCCceeEEEEEEeC---CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEE
Q 048614           38 KEVGDGNLNFVYIVVGS---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~v  113 (165)
                      ..||.|..-.||++...   .+ .+.||.-.....     -....++...|+++|+.+.  -|..++-.-.++.+...+|
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-----~~~~~~~~~~E~~il~~l~--hpnIv~l~~~~~~~~~~lv  447 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-----DPALKDELLAEANVMQQLD--NPYIVRMIGICEAESWMLV  447 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG-----CGGGHHHHHHHHHHHHHCC--CTTBCCEEEEEESSSEEEE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC-----CHHHHHHHHHHHHHHHhCC--CCCEeeEEEEEecCCEEEE
Confidence            46999999999998543   23 688996653321     1233567888999998885  2555554445566667899


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|.+.+..+...     -.++.+|...|+-+|...
T Consensus       448 ~E~~~--~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~  489 (635)
T 4fl3_A          448 MEMAE--LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN  489 (635)
T ss_dssp             EECCT--TEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEccC--CCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998  44777777765533     257888999999999753

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=96.22  E-value=0.041  Score=43.01  Aligned_cols=104  Identities=15%  Similarity=0.108  Sum_probs=70.8

Q ss_pred             cc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CC
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RT  108 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~  108 (165)
                      .+ -.+.+|.|....||++.+. +| .++||.-...         -..++...|.+.++.+...  ..+|.++.+.  ..
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---------~~~~~~~~e~~~~~~l~~~--~~i~~~~~~~~~~~   79 (298)
T 1csn_A           11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR---------SDAPQLRDEYRTYKLLAGC--TGIPNVYYFGQEGL   79 (298)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC---------TTSCCHHHHHHHHHHTTTC--TTCCCEEEEEEETT
T ss_pred             ceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC---------CccHHHHHHHHHHHHHhcC--CCCCeEEeecCCCc
Confidence            44 5678999999999999974 45 8999964211         1224567788888877542  2456666554  45


Q ss_pred             CceEEEecCCCCchHHHHHHHc-CC-CC----HHHHHHHHHHHHHHHhc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIA-GI-KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~-g~-~~----~~~a~~iG~~La~~h~~  151 (165)
                      ...+|||+++   .+|.+.+.. +. ..    -.++.+|...|+.+|..
T Consensus        80 ~~~lv~e~~~---~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  125 (298)
T 1csn_A           80 HNVLVIDLLG---PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK  125 (298)
T ss_dssp             EEEEEEECCC---CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeEEEEEecC---CCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            6689999996   266666654 22 22    25788889999999965

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=96.21  E-value=0.043  Score=45.28  Aligned_cols=107  Identities=19%  Similarity=0.128  Sum_probs=65.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-----
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT-----  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~-----  108 (165)
                      .++.+|.|....||++.+. +| .|+||....-..     -.....|...|.++|+.+..  |..+.-.-.+..+     
T Consensus        29 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--pnIv~l~~~~~~~~~~~~  101 (367)
T 1cm8_A           29 DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-----SELFAKRAYRELRLLKHMRH--ENVIGLLDVFTPDETLDD  101 (367)
T ss_dssp             EEEEC------CEEEEEETTTCCEEEEEECSSTTS-----SHHHHHHHHHHHHHHHHCCB--TTBCCCSEEECSCSSTTT
T ss_pred             EeEEeeecCCeEEEEEEECCCCCEEEEEEeCcccc-----CHHHHHHHHHHHHHHHhCCC--cCCCCceeeEecCCcccc
Confidence            5678999999999999875 45 899997642111     11234678889999988752  4333322222222     


Q ss_pred             --CceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          109 --MSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 --~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                        ...+|||+++   ..|.+.+..+....    .++.+|...|..+|...
T Consensus       102 ~~~~~lv~e~~~---~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~  148 (367)
T 1cm8_A          102 FTDFYLVMPFMG---TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG  148 (367)
T ss_dssp             CCCCEEEEECCS---EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEEecCC---CCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              3489999996   36666666655432    46778888999999753

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=96.20  E-value=0.05  Score=42.85  Aligned_cols=111  Identities=13%  Similarity=-0.016  Sum_probs=72.9

Q ss_pred             CCcc-eeEecCCCceeEEEEEEe------CCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVG------SSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY  103 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~------~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~  103 (165)
                      ...+ -.+.+|.|....||++.+      .++ .++||.-.....      .-...+...|.++|+.+... | ++++++
T Consensus        26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-p-~iv~~~   97 (316)
T 2xir_A           26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT------HSEHRALMSELKILIHIGHH-L-NVVNLL   97 (316)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC------HHHHHHHHHHHHHHHHHCCC-T-TBCCEE
T ss_pred             hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC------cHHHHHHHHHHHHHHhcccC-C-CeeeEE
Confidence            3455 467899999999999974      234 789997653211      11234667788888777432 3 344555


Q ss_pred             EE--cCC-CceEEEecCCCCchHHHHHHHcCCC----------------C-----HHHHHHHHHHHHHHHhcc
Q 048614          104 HF--DRT-MSLIGMRYLEPPHIILRKGLIAGIK----------------Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       104 ~~--D~~-~~~~vMEdL~~~~~~lr~~l~~g~~----------------~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+  +++ ...+|||+++  ..+|.+.+.....                .     -.++.+|...|..+|...
T Consensus        98 ~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  168 (316)
T 2xir_A           98 GACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK  168 (316)
T ss_dssp             EEECCTTSCCEEEEECCT--TEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCCCceEEEEEcCC--CCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            43  222 3789999997  4578887766432                1     247788999999999763

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=96.18  E-value=0.034  Score=45.93  Aligned_cols=107  Identities=14%  Similarity=-0.003  Sum_probs=72.3

Q ss_pred             eeEecCCCceeEEEEEEeC--------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-
Q 048614           36 TIKEVGDGNLNFVYIVVGS--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-  105 (165)
                      -.+.||.|....||++.+.        .+ .++||.......      .-...+...|.++|+.+... | ++++++.+ 
T Consensus        73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-p-nIv~~~~~~  144 (382)
T 3tt0_A           73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT------EKDLSDLISEMEMMKMIGKH-K-NIINLLGAC  144 (382)
T ss_dssp             EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC------HHHHHHHHHHHHHHHHHCCC-T-TBCCEEEEE
T ss_pred             eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC------HHHHHHHHHHHHHHHHhcCC-c-hhhhheeee
Confidence            3577999999999999852        22 588887653221      12336777888888887542 3 34444443 


Q ss_pred             -cCCCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 048614          106 -DRTMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 -D~~~~~~vMEdL~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                       +.....+|||+++  ..+|.+.+....                 ..    -.++.+|...|+.+|...
T Consensus       145 ~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  211 (382)
T 3tt0_A          145 TQDGPLYVIVEYAS--KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK  211 (382)
T ss_dssp             CSSSSCEEEEECCT--TCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCceEEEEEecC--CCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence             4556789999997  347878776543                 21    257788899999999753

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=96.17  E-value=0.019  Score=46.40  Aligned_cols=108  Identities=11%  Similarity=0.028  Sum_probs=70.7

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      ..+.+|.|....||++.+.+ + .+++|........    -....++...|..+|+.+.   -.++++++.+  +.+...
T Consensus        45 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~----~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~  117 (335)
T 2owb_A           45 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL----KPHQREKMSMEISIHRSLA---HQHVVGFHGFFEDNDFVF  117 (335)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC----SHHHHHHHHHHHHHHHTCC---CTTBCCEEEEEECSSEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhc----CHHHHHHHHHHHHHHHhCC---CCCCCeEEEEEecCCeEE
Confidence            56788999999999999874 4 6888875432211    0122355666777776653   2345555544  555678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+..+...     -.++.+|...|..+|...
T Consensus       118 lv~e~~~--~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  161 (335)
T 2owb_A          118 VVLELCR--RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR  161 (335)
T ss_dssp             EEECCCT--TCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCC--CCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  34666666554332     257888899999999753

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=96.16  E-value=0.028  Score=45.47  Aligned_cols=115  Identities=14%  Similarity=0.010  Sum_probs=74.6

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT  108 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~  108 (165)
                      ..++ -++.+|.|....||++.+. ++ .+.+|.+...++.  ....-...+...|..+|+.+..  |..++-.-.+...
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~--~~~~~~~~~~~~E~~~l~~l~h--p~iv~~~~~~~~~   89 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDN--PHVCRLLGICLTS   89 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECC--CSSCCCHHHHHHHHHHHTTCCB--TTBCCCCEEEESS
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecc--ccCHHHHHHHHHHHHHHHhCCC--CCeeEEEEEEecC
Confidence            4456 6788999999999999864 33 4444444433331  2233456788889998877752  4444433344456


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...++||++.  ...|.+.+....  ..    -.++.+|...|..+|...
T Consensus        90 ~~~~v~~~~~--~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  137 (327)
T 3lzb_A           90 TVQLITQLMP--FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR  137 (327)
T ss_dssp             SEEEEECCCS--SCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEecC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            6789999998  346667665522  22    257788899999999764

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=96.15  E-value=0.022  Score=45.80  Aligned_cols=106  Identities=13%  Similarity=0.015  Sum_probs=68.6

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC--
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTM--  109 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~--  109 (165)
                      ..+ -.+.+|.|....||++...+..++||.-...-.        ...+...|...|+.   +--.++.+++.+-.+.  
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~--------~~~~~~~E~~~l~~---l~hpniv~~~~~~~~~~~   92 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDK--------QSWQNEYEVYSLPG---MKHENILQFIGAEKRGTS   92 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGH--------HHHHHHHHHHTSTT---CCCTTBCCEEEEEEEECS
T ss_pred             hhchhhheecccCceEEEEEEECCCEEEEEEeecCch--------HHHHHHHHHHHHhc---CCCCCchhhcceeccCCC
Confidence            345 567899999999999998755899997532111        11233334444433   3233455566553332  


Q ss_pred             ----ceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 048614          110 ----SLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 ----~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                          ..+||||++  ..+|.+.+..+....    .++.+|...|+-+|..
T Consensus        93 ~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~  140 (322)
T 3soc_A           93 VDVDLWLITAFHE--KGSLSDFLKANVVSWNELCHIAETMARGLAYLHED  140 (322)
T ss_dssp             SSEEEEEEEECCT--TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred             CCceEEEEEecCC--CCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence                379999997  457888887665432    5778888889999876

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=96.15  E-value=0.022  Score=45.71  Aligned_cols=111  Identities=17%  Similarity=0.111  Sum_probs=72.4

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC-CC---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS-SG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--  104 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--  104 (165)
                      .+++ -.+.+|.|....||++.+. +|   .++||.-.....      .-...+...|.++|+.+... | ++++++.  
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-p-~iv~~~~~~   95 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS------KDDHRDFAGELEVLCKLGHH-P-NIINLLGAC   95 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------------CHHHHHHHHHTTCCCC-T-TBCCEEEEE
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccc------hHHHHHHHHHHHHHHhccCC-C-chhhhceee
Confidence            3455 5678999999999999875 34   347887653322      12335677888888766332 3 3444443  


Q ss_pred             EcCCCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 048614          105 FDRTMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~D~~~~~~vMEdL~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .+.....+|||+++  ..+|.+.+.+..                 ..    -.++.+|...|+.+|...
T Consensus        96 ~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  162 (327)
T 1fvr_A           96 EHRGYLYLAIEYAP--HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ  162 (327)
T ss_dssp             EETTEEEEEECCCT--TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeCCceEEEEecCC--CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            45667789999997  347777776543                 11    257888899999999753

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=96.14  E-value=0.02  Score=47.33  Aligned_cols=112  Identities=13%  Similarity=0.013  Sum_probs=75.2

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      +++ -++.+|.|....||++.... | .++||.-.......    .-..++...|..+|+....  ..++++++.  .+.
T Consensus        20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~----~~~~~~~~~E~~~l~~~~~--hp~iv~l~~~~~~~   93 (353)
T 2i0e_A           20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ----DDDVECTMVEKRVLALPGK--PPFLTQLHSCFQTM   93 (353)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHH----TTCHHHHHHHHHHHTCTTC--CTTBCCEEEEEECS
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhc----chHHHHHHHHHHHHHhcCC--CCEEeeEEEEEEcC
Confidence            345 56789999999999999874 4 68999765432211    1345677888888865532  334455544  355


Q ss_pred             CCceEEEecCCCCchHHHHHHHcC-CCCH----HHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAG-IKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g-~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +...+||||++  +..|.+.+.+. ....    .++.+|...|..+|...
T Consensus        94 ~~~~lv~E~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g  141 (353)
T 2i0e_A           94 DRLYFVMEYVN--GGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG  141 (353)
T ss_dssp             SEEEEEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            67789999997  34677777653 3322    46788888999999753

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=96.13  E-value=0.027  Score=48.94  Aligned_cols=102  Identities=15%  Similarity=0.173  Sum_probs=69.4

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~  111 (165)
                      -.+.||.|....||++.+. ++ .|+||.....         ....+...|.++|+.+..  +..+|.+  +..+.+...
T Consensus        11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~---------~~~~~~~~E~~il~~L~~--~~~i~~i~~~~~~~~~~~   79 (483)
T 3sv0_A           11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK---------TKHPQLLYESKIYRILQG--GTGIPNVRWFGVEGDYNV   79 (483)
T ss_dssp             CCCCCEECSSCEEEEEEETTTCCEEEEEEEETT---------CSSCCHHHHHHHHHHTTT--STTCCCEEEEEEETTEEE
T ss_pred             EEEEEeeCCCEEEEEEEECCCCcEEEEEEeccc---------cccHHHHHHHHHHHHhcC--CCCCCeEEEEEeeCCEEE
Confidence            4567899999999999975 44 8999942211         112357789999988765  2344444  445666778


Q ss_pred             EEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++.   .|.+.+..  +...    -.++.+|...|..+|..
T Consensus        80 lvme~~g~---sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  122 (483)
T 3sv0_A           80 LVMDLLGP---SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK  122 (483)
T ss_dssp             EEEECCCC---BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEECCCC---CHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999963   55555542  2222    25788889999999965

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=96.12  E-value=0.056  Score=43.37  Aligned_cols=104  Identities=18%  Similarity=0.126  Sum_probs=69.8

Q ss_pred             cc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT  108 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~  108 (165)
                      .+ -.+.+|.|....||++.+. +| .++||.-...         -..++...|.++|+.+...  ..+++++.+  +..
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---------~~~~~~~~E~~~l~~l~~h--~~i~~~~~~~~~~~   78 (330)
T 2izr_A           10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMK---------SRAPQLHLEYRFYKQLGSG--DGIPQVYYFGPCGK   78 (330)
T ss_dssp             TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETT---------CSSCCHHHHHHHHHHHCSC--TTSCCEEEEEEETT
T ss_pred             CeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccc---------cchHHHHHHHHHHHHhhCC--CCCCEEEEEEecCC
Confidence            44 5678999999999999974 45 8999963211         1124677899999887542  345555544  445


Q ss_pred             CceEEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      ...+|||+++.   +|.+.+..  +...    -.++.+|...|..+|..
T Consensus        79 ~~~lv~e~~~~---~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~  124 (330)
T 2izr_A           79 YNAMVLELLGP---SLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK  124 (330)
T ss_dssp             EEEEEEECCCC---BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccEEEEEeCCC---CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            56899999962   56565553  2222    25788889999999965

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=96.11  E-value=0.043  Score=46.88  Aligned_cols=107  Identities=11%  Similarity=0.065  Sum_probs=73.7

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -++.||.|....||++.+. +| .++||.-......     .-...+...|.++|+.+..  |. +++++.  .+.....
T Consensus        26 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--pn-iv~~~~~~~~~~~~~   97 (486)
T 3mwu_A           26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-----NKDTSTILREVELLKKLDH--PN-IMKLFEILEDSSSFY   97 (486)
T ss_dssp             EEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-----CSCHHHHHHHHHHHHHCCC--TT-BCCEEEEEECSSEEE
T ss_pred             EeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-----chHHHHHHHHHHHHHhCCC--CC-cCeEEEEEEcCCEEE
Confidence            5788999999999999986 44 7999976533221     1345788899999988742  43 444443  3556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++ + ..|.+.+.....+     -.++.+|...|..+|...
T Consensus        98 lv~e~~~-~-~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  141 (486)
T 3mwu_A           98 IVGELYT-G-GELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN  141 (486)
T ss_dssp             EEECCCC-S-CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEcCC-C-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998 3 3555555554332     247778888888899653

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=96.09  E-value=0.027  Score=44.28  Aligned_cols=108  Identities=11%  Similarity=0.028  Sum_probs=70.2

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      ..+.+|.|....||++.+.. + .+++|........    -....++...|...|+.+.   -.++++++.+  +.+...
T Consensus        19 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~----~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~   91 (294)
T 2rku_A           19 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL----KPHQREKMSMEISIHRSLA---HQHVVGFHGFFEDNDFVF   91 (294)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC----SHHHHHHHHHHHHHHHTCC---CTTBCCEEEEEECSSEEE
T ss_pred             EEEEEeecCCEEEEEEEECCCCceEEEEEechhhcc----CHHHHHHHHHHHHHHHhCC---CCCEeeeeeeeccCCEEE
Confidence            67788999999999999874 4 6788875432211    0122356667777776653   2344555544  445568


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+..+...     -.++.+|...|+.+|...
T Consensus        92 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  135 (294)
T 2rku_A           92 VVLELCR--RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR  135 (294)
T ss_dssp             EEEECCT--TCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  34666666554322     257888899999999753

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=96.09  E-value=0.02  Score=44.96  Aligned_cols=109  Identities=14%  Similarity=0.024  Sum_probs=70.4

Q ss_pred             ccee-EecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc----
Q 048614           34 ALTI-KEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD----  106 (165)
Q Consensus        34 ~~~v-~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D----  106 (165)
                      .+.+ ..+|.|....||++.+.. + .+.+|.-......     .-...+...|..+|+.+.   -.++++++.+-    
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~-----~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~   98 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-----KSERQRFKEEAEMLKGLQ---HPNIVRFYDSWESTV   98 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-----HHHHHHHHHHHHHHTTCC---CTTBCCEEEEEEEES
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC-----HHHHHHHHHHHHHHHhCC---CCCeeeeeeeecccc
Confidence            3544 459999999999998864 3 6777765432211     122456667777776653   23445555432    


Q ss_pred             --CCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          107 --RTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 --~~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                        .....+|||+++  ..+|++.+......     -.++.+|...|+.+|...
T Consensus        99 ~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  149 (290)
T 1t4h_A           99 KGKKCIVLVTELMT--SGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT  149 (290)
T ss_dssp             SSCEEEEEEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             CCCceEEEEEEecC--CCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence              233689999997  35777777663332     246788899999999765

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=96.08  E-value=0.025  Score=45.13  Aligned_cols=111  Identities=16%  Similarity=0.131  Sum_probs=73.4

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      +.+ -.+.+|.|....||++.+. ++ .++||.-.......    +...++...|...|+.+..  | ++++++.+  +.
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~h--p-~iv~~~~~~~~~  106 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSD----PVFRTRMQREARTAGRLQE--P-HVVPIHDFGEID  106 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGS----HHHHHHHHHHHHHHTTCCC--T-TBCCEEEEEEET
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccC----HHHHHHHHHHHHHHhhcCC--C-CeeEEEEEEeeC
Confidence            455 5678899999999999976 45 79999865433210    1223566677777766532  3 34445443  45


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      ....++||+++  ...|.+.+..... .    -.++.+|...|..+|...
T Consensus       107 ~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  154 (309)
T 2h34_A          107 GQLYVDMRLIN--GVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAG  154 (309)
T ss_dssp             TEEEEEEECCC--CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEEEecC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence            66789999997  4577777765432 2    257888888999999753

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=96.08  E-value=0.046  Score=46.09  Aligned_cols=108  Identities=13%  Similarity=0.052  Sum_probs=75.7

Q ss_pred             cc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC---
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR---  107 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~---  107 (165)
                      .+ -.+.+|.|....||++.+. +| .|+||.-..-..     -.....|...|..+|+.+..  | ++.+++.+-.   
T Consensus        27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~-nIv~l~~~~~~~~   98 (432)
T 3n9x_A           27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE-----DLIDCKRILREITILNRLKS--D-YIIRLYDLIIPDD   98 (432)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTT-----SHHHHHHHHHHHHHHHHCCC--T-TBCCEEEECCCSC
T ss_pred             CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhc-----ChHHHHHHHHHHHHHHHcCC--C-CcceEEEEEecCC
Confidence            44 5678999999999999876 34 799997653221     12345788899999988752  3 4555555432   


Q ss_pred             ----CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          108 ----TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ----~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                          ....+|||+++  . .|.+.+..+...     -.++.+|...|.-+|...
T Consensus        99 ~~~~~~~~lv~e~~~--~-~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g  149 (432)
T 3n9x_A           99 LLKFDELYIVLEIAD--S-DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG  149 (432)
T ss_dssp             TTTCCCEEEEEECCS--E-EHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCcCCeEEEEEecCC--c-CHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                34689999987  3 787888776533     257788889999999753

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=96.08  E-value=0.036  Score=43.51  Aligned_cols=106  Identities=15%  Similarity=0.116  Sum_probs=68.8

Q ss_pred             eeEecCCCceeEEEEEEeCC--C---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---cC
Q 048614           36 TIKEVGDGNLNFVYIVVGSS--G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF---DR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~--g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---D~  107 (165)
                      -.+.+|.|....||++...+  +   .+.||.......      .-..++...|..+|+.+.  -|. +.+++.+   +.
T Consensus        29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~------~~~~~~~~~E~~~l~~l~--h~~-iv~~~~~~~~~~   99 (298)
T 3f66_A           29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD------IGEVSQFLTEGIIMKDFS--HPN-VLSLLGICLRSE   99 (298)
T ss_dssp             EEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS------HHHHHHHHHHHHHHHTCC--CTT-BCCCCEEECCSS
T ss_pred             hcceeeecCCceEEEEEEecCCCceeEEEEEecccCCC------HHHHHHHHHHHHHHHhCC--CCC-EeeeeeEEEcCC
Confidence            45789999999999998642  2   367776553211      122356777888887764  244 3444443   34


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ....++||+++  ..+|.+.+....  ..    -.++.+|...|+.+|...
T Consensus       100 ~~~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~  148 (298)
T 3f66_A          100 GSPLVVLPYMK--HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK  148 (298)
T ss_dssp             SCCEEEEECCT--TCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEeCCC--CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            56689999998  457888776532  22    246678899999999763

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=96.07  E-value=0.096  Score=41.34  Aligned_cols=103  Identities=18%  Similarity=0.201  Sum_probs=67.7

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      .++.+|.|....||++.+.. | .++||.....         -...+...|.++|+.+..  | ++++++.  .+.....
T Consensus        33 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---------~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~  100 (314)
T 3com_A           33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE---------SDLQEIIKEISIMQQCDS--P-HVVKYYGSYFKNTDLW  100 (314)
T ss_dssp             EEEECC----CEEEEEEETTTCCEEEEEEEETT---------SCCHHHHHHHHHHHTCCC--T-TBCCEEEEEEETTEEE
T ss_pred             hheeeccCCCeEEEEEEECCCCCEEEEEecCch---------HHHHHHHHHHHHHHhCCC--C-CCccEEEEEEeCCEEE
Confidence            56789999999999998763 5 7999976421         134678888888877632  3 4445554  3456678


Q ss_pred             EEEecCCCCchHHHHHHHc-C-CCC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIA-G-IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~-g-~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+.. + ...    -.++.+|...|..+|...
T Consensus       101 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  145 (314)
T 3com_A          101 IVMEYCG--AGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR  145 (314)
T ss_dssp             EEEECCT--TEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeecCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  3467666642 2 222    257888889999999753

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=96.07  E-value=0.018  Score=45.42  Aligned_cols=113  Identities=12%  Similarity=0.087  Sum_probs=66.3

Q ss_pred             cc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCC-------------------CCChHHHHHHHHHHHHh
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESW-------------------PMTKERAYFEALALKEH   91 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~-------------------~l~~~R~~~E~~~L~~~   91 (165)
                      .+ -.+.+|.|....||++.+. +| .++||.-..........+                   .-..++...|.++|+.+
T Consensus        14 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   93 (298)
T 2zv2_A           14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL   93 (298)
T ss_dssp             TEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred             ceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence            44 5678999999999999876 44 799997653321100111                   11245677888888876


Q ss_pred             hccCCCCCceEEEE--c--CCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhc
Q 048614           92 GQLCPDHVPEVYHF--D--RTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus        92 ~~~~p~~vP~v~~~--D--~~~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      ..  | ++++++.+  +  .....+|||+++.  ..|.+.+..+...    -.++.+|...|+.+|..
T Consensus        94 ~h--~-~iv~~~~~~~~~~~~~~~lv~e~~~~--~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  156 (298)
T 2zv2_A           94 DH--P-NVVKLVEVLDDPNEDHLYMVFELVNQ--GPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ  156 (298)
T ss_dssp             CC--T-TBCCEEEEEECSSSSEEEEEEECCTT--CBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CC--C-CCCeEEEEEEcCCCCEEEEEEecCCC--CcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            42  3 44555544  3  3456899999972  2443332223222    24778889999999975

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=96.06  E-value=0.053  Score=43.96  Aligned_cols=109  Identities=14%  Similarity=0.049  Sum_probs=70.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      .++.+|.|....||++.+. +| .++||........  ..-.--..+...|.++|+.+..  | ++++++.  .+.....
T Consensus        14 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~~~~~   88 (346)
T 1ua2_A           14 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRS--EAKDGINRTALREIKLLQELSH--P-NIIGLLDAFGHKSNIS   88 (346)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC--------------CTHHHHHHHHHHHCCC--T-TBCCEEEEECCTTCCE
T ss_pred             EEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcc--hhhhhhhHHHHHHHHHHhhCCC--C-CCCeEEEEEeeCCceE
Confidence            5678999999999999986 35 7999987643221  1001112466788888887742  3 4444543  3667889


Q ss_pred             EEEecCCCCchHHHHHHHcCC--C----CHHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI--K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~--~----~~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  . .+...+....  .    .-.++.+|...|..+|...
T Consensus        89 lv~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  132 (346)
T 1ua2_A           89 LVFDFME--T-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW  132 (346)
T ss_dssp             EEEECCS--E-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEcCC--C-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  3 5666665532  1    1368888999999999753

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=96.06  E-value=0.037  Score=44.43  Aligned_cols=112  Identities=15%  Similarity=0.122  Sum_probs=73.7

Q ss_pred             CCCcc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--
Q 048614           31 KFDAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--  105 (165)
Q Consensus        31 ~~~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--  105 (165)
                      ..+.+ .+..+|.|....||++.+.. | .++||.-....     .-.....+...|.++|+.+..  | ++++++.+  
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~   94 (331)
T 4aaa_A           23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-----DDKMVKKIAMREIKLLKQLRH--E-NLVNLLEVCK   94 (331)
T ss_dssp             CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-----SCHHHHHHHHHHHHHHHHCCC--T-TBCCEEEEEE
T ss_pred             hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-----CchHHHHHHHHHHHHHhhCCC--C-CEeeEEEEee
Confidence            34455 67899999999999999873 4 79999653211     111223455678888877752  3 44555544  


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +.....+|||+++  ...+...+......     -.++.+|...|+.+|...
T Consensus        95 ~~~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  144 (331)
T 4aaa_A           95 KKKRWYLVFEFVD--HTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN  144 (331)
T ss_dssp             ETTEEEEEEECCS--EEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCEEEEEEecCC--cchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4455689999998  45776665544332     257788889999999763

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=96.05  E-value=0.049  Score=46.81  Aligned_cols=111  Identities=14%  Similarity=0.130  Sum_probs=69.7

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccc------cCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRC------IGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~------~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--  105 (165)
                      .++.||.|....||++.+.. + .++||.-......      ......-..++...|.++|+.+..  | ++++++.+  
T Consensus        40 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--p-niv~~~~~~~  116 (504)
T 3q5i_A           40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDH--P-NIIKLFDVFE  116 (504)
T ss_dssp             EEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCC--T-TBCCEEEEEE
T ss_pred             EEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCC--C-CCCeEEEEEE
Confidence            57899999999999999864 4 7888875432210      001112345677888888887742  4 34455543  


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +.....+|||+++ + ..|.+.+.....+     -.++.+|...|+.+|..
T Consensus       117 ~~~~~~lv~e~~~-g-g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~  165 (504)
T 3q5i_A          117 DKKYFYLVTEFYE-G-GELFEQIINRHKFDECDAANIMKQILSGICYLHKH  165 (504)
T ss_dssp             CSSEEEEEEECCT-T-CBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCEEEEEEecCC-C-CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            5556689999997 3 3566666554332     25778888899999965

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=96.05  E-value=0.05  Score=44.76  Aligned_cols=106  Identities=14%  Similarity=0.026  Sum_probs=70.5

Q ss_pred             eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 048614           36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      -++.||.|....||++...      .+ .|+||.-.....      .-...+...|+.+|+.+..  | ++++++.+  +
T Consensus        75 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~h--p-nIv~~~~~~~~  145 (367)
T 3l9p_A           75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS------EQDELDFLMEALIISKFNH--Q-NIVRCIGVSLQ  145 (367)
T ss_dssp             EEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC------HHHHHHHHHHHHHHHHCCC--T-TBCCEEEEECS
T ss_pred             EeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC------hhhHHHHHHHHHHHHhCCC--C-CCCeEEEEEec
Confidence            4678999999999999842      34 699998643211      1122456678888877632  3 34445544  4


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC--------CC----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGI--------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~--------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+|||+++  ...|.+.+....        ..    -.++.+|...|+-+|...
T Consensus       146 ~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  201 (367)
T 3l9p_A          146 SLPRFILLELMA--GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH  201 (367)
T ss_dssp             SSSCEEEEECCT--TEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEEeCC--CCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence            556789999997  347777776532        11    257889999999999763

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=96.05  E-value=0.072  Score=42.79  Aligned_cols=107  Identities=14%  Similarity=0.170  Sum_probs=73.8

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR--  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--  107 (165)
                      +++ -.+.+|.|....||++.+. +| .++||.-.+.-.      +....+...|.++|+.+.   -.++++++.+-.  
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~   81 (353)
T 2b9h_A           11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK------PLFALRTLREIKILKHFK---HENIITIFNIQRPD   81 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSS------HHHHHHHHHHHHHHHHCC---CTTBCCEEEECCCS
T ss_pred             cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccccc------chHHHHHHHHHHHHHhCc---CCCcCCeeeeeccc
Confidence            344 5678999999999999876 45 799997653221      223356677888887764   234555565432  


Q ss_pred             -----CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 048614          108 -----TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 -----~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                           ....++||+++  . .|.+.+..+....    .++.+|...|+.+|..
T Consensus        82 ~~~~~~~~~lv~e~~~--~-~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~  131 (353)
T 2b9h_A           82 SFENFNEVYIIQELMQ--T-DLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS  131 (353)
T ss_dssp             CSTTCCCEEEEECCCS--E-EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccCccceEEEEEeccC--c-cHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence                 45689999997  2 5777776655432    5778888999999975

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=96.04  E-value=0.047  Score=42.77  Aligned_cols=106  Identities=15%  Similarity=0.122  Sum_probs=69.9

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      .++.+|.|....||++.+. +| .++||........     .-..++...|.+.|+.+.   -.++++++.+  +.+...
T Consensus         7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~   78 (299)
T 2r3i_A            7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-----EGVPSTAIREISLLKELN---HPNIVKLLDVIHTENKLY   78 (299)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEC-------------CCHHHHHHHHHHTTCC---CTTBCCEEEEEEETTEEE
T ss_pred             hhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc-----hhhHHHHHHHHHHHHHcC---CCCeeeEEEEEecCCceE
Confidence            5678999999999999886 45 7999976533211     123467778888887663   2344555543  556678


Q ss_pred             EEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  . .|.+.+....   ..    -.++.+|...|..+|...
T Consensus        79 lv~e~~~--~-~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  123 (299)
T 2r3i_A           79 LVFEFLH--Q-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR  123 (299)
T ss_dssp             EEEECCS--E-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEccc--C-CHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  2 6777666542   22    246788899999999763

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=96.03  E-value=0.056  Score=46.57  Aligned_cols=103  Identities=18%  Similarity=0.092  Sum_probs=73.5

Q ss_pred             eEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~  112 (165)
                      .+.||.|....||++.... + .|+||.-..-        ....++...|+++|+.+..  |. +.+++.+  +.....+
T Consensus       225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~h--pn-iv~l~~~~~~~~~~~l  293 (495)
T 1opk_A          225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--------TMEVEEFLKEAAVMKEIKH--PN-LVQLLGVCTREPPFYI  293 (495)
T ss_dssp             EEESGGGTTSSEEEEEEGGGTEEEEEEECCSS--------SSCHHHHHHHHHHHHHCCC--TT-BCCEEEEECSSSSCEE
T ss_pred             eeEecCCCCeEEEEEEEcCCCeEEEEEEecCc--------ccchHHHHHHHHHHHhcCC--CC-EeeEEEEEecCCcEEE
Confidence            5689999999999998874 4 7999986421        2346788899999988742  43 4444443  4567889


Q ss_pred             EEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...|.+.|.+..   ..    -.++.+|...|+.+|...
T Consensus       294 v~E~~~--~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  338 (495)
T 1opk_A          294 ITEFMT--YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN  338 (495)
T ss_dssp             EEECCT--TCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEccC--CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997  347777776522   22    256789999999999753

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=96.02  E-value=0.05  Score=43.76  Aligned_cols=115  Identities=14%  Similarity=0.010  Sum_probs=69.7

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT  108 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~  108 (165)
                      ..++ .++.+|.|....||++... +| .+.+|.|...++.  ....-...+...|+.+|+.+..  |..++-.-.+...
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~   89 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDN--PHVCRLLGICLTS   89 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCB--TTBCCEEEEEESS
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccc--ccCHHHHHHHHHHHHHHHhCCC--CCEeEEEEEEecC
Confidence            3455 5688999999999999864 33 3333333322321  1123445678889999988753  4444333334455


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...++||++.  ...|.+.+....  ..    -.++.+|...|+.+|...
T Consensus        90 ~~~~v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  137 (327)
T 3poz_A           90 TVQLITQLMP--FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR  137 (327)
T ss_dssp             SEEEEEECCT--TCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEEecC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            6779999998  346666666532  22    257888999999999763

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=96.01  E-value=0.11  Score=40.43  Aligned_cols=111  Identities=17%  Similarity=0.153  Sum_probs=64.4

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      +++ -++.+|.|....||++.+. +| .++||.-.....        +.+......+.......+--.++++++.  .+.
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~   78 (290)
T 3fme_A            7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--------SQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE   78 (290)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C--------HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC--------cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeecc
Confidence            344 6788999999999999985 45 799997653321        1112222222222223332234445543  466


Q ss_pred             CCceEEEecCCCCc-hHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhc
Q 048614          108 TMSLIGMRYLEPPH-IILRKGLIAGIKYP-----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 ~~~~~vMEdL~~~~-~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~  151 (165)
                      ....+|||+++.+. ..++.....+...+     .++.+|...|+.+|..
T Consensus        79 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  128 (290)
T 3fme_A           79 GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK  128 (290)
T ss_dssp             SSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            77899999997311 12333333343332     5788899999999975

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=95.99  E-value=0.037  Score=44.58  Aligned_cols=108  Identities=16%  Similarity=0.083  Sum_probs=70.5

Q ss_pred             cc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT  108 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~  108 (165)
                      .+ -++.+|.|....||++.+. +| .++||.-.....     -.-...+...|.++|+.+..  | ++.+++.  .+..
T Consensus        35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~~  106 (329)
T 3gbz_A           35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-----EEGVPGTAIREVSLLKELQH--R-NIIELKSVIHHNH  106 (329)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC-------------CHHHHHHGGGCCC--T-TBCCEEEEEEETT
T ss_pred             hEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-----ccccchhHHHHHHHHHHcCC--C-CcceEEEEEecCC
Confidence            45 5688999999999999876 45 799997653221     11223455678888876642  3 3444443  3566


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++  . .|.+.+......     -.++.+|...|..+|...
T Consensus       107 ~~~lv~e~~~--~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~  152 (329)
T 3gbz_A          107 RLHLIFEYAE--N-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR  152 (329)
T ss_dssp             EEEEEEECCS--E-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEecCC--C-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            7789999997  3 677777665432     246788889999999753

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=95.98  E-value=0.014  Score=46.86  Aligned_cols=86  Identities=19%  Similarity=0.166  Sum_probs=56.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      -.+.+|.|....||++.+. ++ .++||.-......  ..-+-..++...|.++|+.+.  .| ++++++.+  +.....
T Consensus        30 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~~~E~~~l~~l~--hp-niv~~~~~~~~~~~~~  104 (345)
T 3hko_A           30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIR--QINPKDVERIKTEVRLMKKLH--HP-NIARLYEVYEDEQYIC  104 (345)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH--C---CHHHHHHHHHHHHHHCC--CT-TBCCEEEEEECSSEEE
T ss_pred             ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhc--ccCHHHHHHHHHHHHHHHhCC--CC-CcceeehhhccCCeEE
Confidence            4678999999999999876 34 7888975532210  011234567888999998875  24 34445443  445568


Q ss_pred             EEEecCCCCchHHHHHH
Q 048614          112 IGMRYLEPPHIILRKGL  128 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l  128 (165)
                      +|||+++  ...|.+.+
T Consensus       105 lv~e~~~--gg~L~~~l  119 (345)
T 3hko_A          105 LVMELCH--GGHLLDKL  119 (345)
T ss_dssp             EEEECCC--SCBHHHHE
T ss_pred             EEEeCCC--CCcHHHHH
Confidence            9999997  34666655

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=95.97  E-value=0.037  Score=44.54  Aligned_cols=111  Identities=15%  Similarity=0.119  Sum_probs=71.5

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccc-cCCCCCCChHHHHHHHHHHHHhhccC-------CCCCceEE----
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRC-IGESWPMTKERAYFEALALKEHGQLC-------PDHVPEVY----  103 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~-~~~~~~l~~~R~~~E~~~L~~~~~~~-------p~~vP~v~----  103 (165)
                      .++.+|.|..-.||++.+.+..++||.-...... ....-.-..++...|.++|+.+..+.       |.. ..++    
T Consensus        24 ~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~ni-v~l~~~~~  102 (336)
T 2vuw_A           24 RCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGF-IGLNSVHC  102 (336)
T ss_dssp             TCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCB-CCEEEEEE
T ss_pred             heeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCch-hhhcceeE
Confidence            4678999999999999985338999987643211 00112345578899999999887431       221 1111    


Q ss_pred             ----------------------------EEcCCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHH
Q 048614          104 ----------------------------HFDRTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTL  149 (165)
Q Consensus       104 ----------------------------~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h  149 (165)
                                                  .++.....+||||+. ....+ +.+.++...    -.++.+|...|.-+|
T Consensus       103 ~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~-~g~ll-~~~~~~~~~~~~~~~i~~qi~~aL~~lH  178 (336)
T 2vuw_A          103 VQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEF-GGIDL-EQMRTKLSSLATAKSILHQLTASLAVAE  178 (336)
T ss_dssp             EESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEEC-CCEET-GGGTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecC-CCccH-HHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence                                        124788899999986 33333 333333332    357888899999999

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=95.96  E-value=0.053  Score=43.13  Aligned_cols=108  Identities=15%  Similarity=0.019  Sum_probs=68.1

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCc-
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RTMS-  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~~~-  110 (165)
                      -.+.+|.|..-.||++.+. +| .++||.-......    -+-...+...|.+.|+.+   --.++++++.+.  .... 
T Consensus        16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~E~~~l~~l---~hp~iv~~~~~~~~~~~~~   88 (311)
T 3ork_A           16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLAR----DPSFYLRFRREAQNAAAL---NHPAIVAVYDTGEAETPAG   88 (311)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTT----SHHHHHHHHHHHTTCCCC---CCTTBCCEEEEEEEEETTE
T ss_pred             EEEEEccCCCEEEEEEEECCCCceEEEEEeCccccC----CHHHHHHHHHHHHHHHcC---CCCCcceEEEeeeccCCCC
Confidence            5678999999999999975 45 7999976532211    011123444555544333   234566666543  2333 


Q ss_pred             ---eEEEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 048614          111 ---LIGMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ---~~vMEdL~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                         .+||||++  ...|++.+..... .    -.++.+|...|+.+|...
T Consensus        89 ~~~~lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  136 (311)
T 3ork_A           89 PLPYIVMEYVD--GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG  136 (311)
T ss_dssp             EEEEEEEECCC--EEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccEEEEecCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               89999997  4577777765432 2    256788888999999753

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=95.96  E-value=0.02  Score=44.50  Aligned_cols=110  Identities=17%  Similarity=0.118  Sum_probs=72.5

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec-
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FD-  106 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D-  106 (165)
                      +++ -++.+|.|....||++.+. +| .++||.......     -....++...|...|+.+.  .| ++++++.  ++ 
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~e~~~l~~l~--h~-~i~~~~~~~~~~   77 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-----TEAEKQMLVSEVNLLRELK--HP-NIVRYYDRIIDR   77 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-----CHHHHHHHHHHHHHHHHCC--CT-TBCCEEEEEEEG
T ss_pred             hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-----CHHHHHHHHHHHHHHHhcC--CC-CCCeEEEEEecC
Confidence            344 5688999999999999886 44 788887642211     0122356677888887774  24 4455554  33 


Q ss_pred             -CCCceEEEecCCCCchHHHHHHHcCC-----CC----HHHHHHHHHHHHHHHhcc
Q 048614          107 -RTMSLIGMRYLEPPHIILRKGLIAGI-----KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 -~~~~~~vMEdL~~~~~~lr~~l~~g~-----~~----~~~a~~iG~~La~~h~~t  152 (165)
                       .....+|||+++  ..+|.+.+..+.     ..    -.++.+|...|..+|...
T Consensus        78 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  131 (279)
T 2w5a_A           78 TNTTLYIVMEYCE--GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS  131 (279)
T ss_dssp             GGTEEEEEEECCT--TEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCceEEEEEeCCC--CCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhccc
Confidence             445689999997  346767665421     21    257888899999999754

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=95.96  E-value=0.016  Score=47.12  Aligned_cols=109  Identities=18%  Similarity=0.134  Sum_probs=72.3

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FD  106 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D  106 (165)
                      .+.+ .++.+|.|....||++.+. +| .+++|.......      .....+...|..+|+.+.   -.++++++.  .+
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~  102 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK------PAIRNQIIRELQVLHECN---SPYIVGFYGAFYS  102 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCC------HHHHHHHHHHHGGGGGCC---CTTBCCEEEEEEE
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccC------HHHHHHHHHHHHHHHHCC---CCCEEEEeEEEEE
Confidence            4455 6788999999999999987 44 788887643211      112345666766666553   234455554  45


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      .....+|||+++  ..+|.+.+......     -.++.+|...|+.+|..
T Consensus       103 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~  150 (360)
T 3eqc_A          103 DGEISICMEHMD--GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK  150 (360)
T ss_dssp             TTEEEEEECCCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEEECCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            666789999997  34677776654322     25777888888889864

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=95.94  E-value=0.038  Score=45.54  Aligned_cols=106  Identities=15%  Similarity=0.121  Sum_probs=71.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -.+.+|.|....||++.+. +| .++||.-...-.     -.-..++...|.++|+.+..  |. +++++.  .+.....
T Consensus        33 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~E~~il~~l~h--pn-Iv~~~~~~~~~~~~~  104 (362)
T 2bdw_A           33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-----SARDFQKLEREARICRKLQH--PN-IVRLHDSIQEESFHY  104 (362)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CHHHHHHHHHHHHHHHHCCC--TT-BCCEEEEEECSSEEE
T ss_pred             EeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-----CHHHHHHHHHHHHHHHhCCC--CC-CCeEEEEEEeCCEEE
Confidence            5678999999999999876 45 789997542211     01123567778888887742  43 444443  4556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  ...|.+.+.....+     ..++.+|...|+.+|..
T Consensus       105 lv~e~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~  147 (362)
T 2bdw_A          105 LVFDLVT--GGELFEDIVAREFYSEADASHCIQQILESIAYCHSN  147 (362)
T ss_dssp             EEECCCC--SCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  34676777665433     25778889999999975

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=95.93  E-value=0.022  Score=47.75  Aligned_cols=104  Identities=18%  Similarity=0.153  Sum_probs=70.7

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      -++.+|.|....||++.+. +| .+++|......       .....+...|.++|+.+..  | ++++++.+  +.....
T Consensus        55 i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-------~~~~~~~~~E~~il~~l~h--p-nIv~~~~~~~~~~~~~  124 (387)
T 1kob_A           55 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-------PLDKYTVKNEISIMNQLHH--P-KLINLHDAFEDKYEMV  124 (387)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-------HHHHHHHHHHHHHHTTCCS--T-TBCCEEEEEECSSEEE
T ss_pred             EEEEEecCCCEEEEEEEECCCCCEEEEEEecccc-------hhhHHHHHHHHHHHHhCCC--c-CCCeEEEEEEeCCEEE
Confidence            5678999999999999876 44 78888653211       2233566778888866532  3 34445443  567788


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  ...|.+.+.... ..     -.++.+|...|+.+|..
T Consensus       125 lv~E~~~--gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  168 (387)
T 1kob_A          125 LILEFLS--GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH  168 (387)
T ss_dssp             EEEECCC--CCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCC--CCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999997  346777665532 22     25778889999999965

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=95.92  E-value=0.063  Score=45.34  Aligned_cols=102  Identities=18%  Similarity=0.107  Sum_probs=68.3

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~~~~~  112 (165)
                      ..+.+|.|....||.....+| .|+||+-...          ..++...|.++|+..... |. ++++|.+.  .....+
T Consensus        19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~----------~~~~~~~E~~~l~~l~~H-pn-Iv~~~~~~~~~~~~~l   86 (434)
T 2rio_A           19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLID----------FCDIALMEIKLLTESDDH-PN-VIRYYCSETTDRFLYI   86 (434)
T ss_dssp             EEEEEEECSTTCEEEEEESSSSEEEEEEEEGG----------GHHHHHHHHHHHHHHTTS-TT-BCCEEEEEECSSEEEE
T ss_pred             ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH----------HHHHHHHHHHHHHhccCC-CC-cCeEEEEEecCCeEEE
Confidence            456799888888876665666 8999975421          125677888888765332 33 44455443  345578


Q ss_pred             EEecCCCCchHHHHHHHcCCCC------------HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY------------PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~------------~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  . +|.+.+......            -.++.+|...|+-+|...
T Consensus        87 v~E~~~--g-sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  135 (434)
T 2rio_A           87 ALELCN--L-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK  135 (434)
T ss_dssp             EECCCS--E-EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCC--C-CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC
Confidence            999996  3 787877664322            148999999999999753

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=95.91  E-value=0.065  Score=42.59  Aligned_cols=109  Identities=13%  Similarity=0.017  Sum_probs=73.2

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--  106 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--  106 (165)
                      ...+ -++.+|.|....||++.+. +| .++||.....        ....++...|...|+.+... | ++++++.+-  
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--------~~~~~~~~~e~~~l~~l~~h-~-~i~~~~~~~~~   92 (326)
T 2x7f_A           23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--------GDEEEEIKQEINMLKKYSHH-R-NIATYYGAFIK   92 (326)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------SSTTHHHHHHHHHHHHHCCS-T-TBCCEEEEEEE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC--------cccHHHHHHHHHHHHhccCC-C-CeeeeeeEEee
Confidence            3345 5688999999999999985 44 7999975321        12346788888888876432 3 344444432  


Q ss_pred             ------CCCceEEEecCCCCchHHHHHHHcC---CCCH----HHHHHHHHHHHHHHhcc
Q 048614          107 ------RTMSLIGMRYLEPPHIILRKGLIAG---IKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ------~~~~~~vMEdL~~~~~~lr~~l~~g---~~~~----~~a~~iG~~La~~h~~t  152 (165)
                            .....+|||+++  ...|.+.+...   ....    .++.+|...|+.+|...
T Consensus        93 ~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  149 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEFCG--AGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK  149 (326)
T ss_dssp             CC--CCCCEEEEEEECCT--TEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCccccceEEEEEEcCC--CCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                  346789999997  34777766542   2222    47788899999999753

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=95.89  E-value=0.023  Score=45.97  Aligned_cols=108  Identities=13%  Similarity=0.046  Sum_probs=70.2

Q ss_pred             cc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--C
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR--T  108 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--~  108 (165)
                      ++ -++.+|.|....||++.+. ++ .++||.-...-.      .-..++...|..+|+.+..  | ++++++.+..  .
T Consensus         8 ~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~h--p-nIv~~~~~~~~~~   78 (323)
T 3tki_A            8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA------VDCPENIKKEICINKMLNH--E-NVVKFYGHRREGN   78 (323)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------------CHHHHHHHHHHCCC--T-TBCCEEEEEECSS
T ss_pred             hceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc------cchHHHHHHHHHHHHhCCC--C-CCCeEEEEEecCC
Confidence            44 5778999999999999876 44 799997532211      1122567788888887642  3 4455555433  4


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++  ...|.+.+..+...     -.++.+|...|..+|...
T Consensus        79 ~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~g  125 (323)
T 3tki_A           79 IQYLFLEYCS--GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG  125 (323)
T ss_dssp             EEEEEEECCT--TEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEEEcCC--CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4569999997  34666666544322     257888899999999654

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=95.86  E-value=0.04  Score=45.59  Aligned_cols=106  Identities=15%  Similarity=-0.018  Sum_probs=70.5

Q ss_pred             eeEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CC
Q 048614           36 TIKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~  108 (165)
                      -.+.+|.|....||++...    ++ .++||.-..-..      .-...+...|+.+|+.+.   -.++++++.+-  ..
T Consensus        49 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~  119 (373)
T 2qol_A           49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT------EKQRRDFLGEASIMGQFD---HPNIIRLEGVVTKSK  119 (373)
T ss_dssp             CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCC------HHHHHHHHHHHHHHTTCC---CTTBCCEEEEECSSS
T ss_pred             eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccC------HHHHHHHHHHHHHHHhCC---CCCCCeEEEEEeeCC
Confidence            4578999999999999764    34 799998753211      112345667777776653   23455666553  45


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++  ...|.+.+.+.. ..     -.++.+|...|+.+|...
T Consensus       120 ~~~lv~e~~~--~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  167 (373)
T 2qol_A          120 PVMIVTEYME--NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG  167 (373)
T ss_dssp             SCEEEEECCT--TCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceEEEEeCCC--CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5689999997  347877776532 22     257888999999999753

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=95.84  E-value=0.063  Score=43.27  Aligned_cols=90  Identities=14%  Similarity=0.034  Sum_probs=57.9

Q ss_pred             CCcc-eeEecCCCceeEEEEEEe-----C-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVG-----S-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY  103 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~-----~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~  103 (165)
                      .+.+ -.+.+|.|..-.||++..     . ++ .++||.-..-..      .-...+...|.++|+.+... |. +.+++
T Consensus        21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-pn-iv~~~   92 (359)
T 3vhe_A           21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT------HSEHRALMSELKILIHIGHH-LN-VVNLL   92 (359)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC------HHHHHHHHHHHHHHHHHCCC-TT-BCCEE
T ss_pred             ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC------HHHHHHHHHHHHHHHhhcCC-cc-eeeee
Confidence            3445 577899999999999973     2 34 799997643211      11235677888888877432 33 44555


Q ss_pred             EE--cCCC-ceEEEecCCCCchHHHHHHHcC
Q 048614          104 HF--DRTM-SLIGMRYLEPPHIILRKGLIAG  131 (165)
Q Consensus       104 ~~--D~~~-~~~vMEdL~~~~~~lr~~l~~g  131 (165)
                      .+  ++.. ..+||||++  ..+|.+.+...
T Consensus        93 ~~~~~~~~~~~iv~e~~~--~g~L~~~l~~~  121 (359)
T 3vhe_A           93 GACTKPGGPLMVIVEFCK--FGNLSTYLRSK  121 (359)
T ss_dssp             EEECSTTSCCEEEEECCT--TEEHHHHHHTT
T ss_pred             eeeecCCCceEEEEEecC--CCcHHHHHHhc
Confidence            43  3333 688999998  34777777654

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=95.83  E-value=0.092  Score=42.46  Aligned_cols=106  Identities=14%  Similarity=0.056  Sum_probs=72.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccC--CCCCceEEE--EcCCC
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLC--PDHVPEVYH--FDRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~--p~~vP~v~~--~D~~~  109 (165)
                      -++.+|.|....||++.+. +| .++||.-...-        ....+...|.++|+.+....  -.++++++.  .+.+.
T Consensus        39 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~  110 (360)
T 3llt_A           39 VIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK--------KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH  110 (360)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH--------HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE
T ss_pred             EEEEEcccCCeEEEEEEECCCCeEEEEEEeccch--------hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe
Confidence            5788999999999999985 34 79999764211        22356777999998886421  123444443  45567


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++.   .|.+.+....   ..    -.++.+|...|+.+|...
T Consensus       111 ~~lv~e~~~~---~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  157 (360)
T 3llt_A          111 MCLIFEPLGP---SLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS  157 (360)
T ss_dssp             EEEEECCCCC---BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEcCCCC---CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7899999962   5666665543   22    246788899999999753

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=95.83  E-value=0.076  Score=42.42  Aligned_cols=109  Identities=15%  Similarity=0.023  Sum_probs=70.3

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY  103 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~  103 (165)
                      ...+ -++.+|.|....||++...      ++ .++||.-.....      .-...+...|..+|+.+.  .| ++++++
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~--h~-~iv~~~   99 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS------EQDELDFLMEALIISKFN--HQ-NIVRCI   99 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCC------HHHHHHHHHHHHHHHHCC--CT-TBCCEE
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccc------hhhHHHHHHHHHHHhhCC--CC-CCCeEE
Confidence            3455 5788999999999999832      33 799998753221      122346677888887762  23 344455


Q ss_pred             EE--cCCCceEEEecCCCCchHHHHHHHcCC--------CC----HHHHHHHHHHHHHHHhc
Q 048614          104 HF--DRTMSLIGMRYLEPPHIILRKGLIAGI--------KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       104 ~~--D~~~~~~vMEdL~~~~~~lr~~l~~g~--------~~----~~~a~~iG~~La~~h~~  151 (165)
                      .+  +.....+|||+++  ...|.+.+....        ..    -.++.+|...|..+|..
T Consensus       100 ~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~  159 (327)
T 2yfx_A          100 GVSLQSLPRFILMELMA--GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN  159 (327)
T ss_dssp             EEECSSSSCEEEEECCT--TEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEcCCCCcEEEEecCC--CCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC
Confidence            44  3445689999997  357878777643        11    25788999999999975

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=95.82  E-value=0.058  Score=45.72  Aligned_cols=113  Identities=14%  Similarity=0.057  Sum_probs=74.1

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cC
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DR  107 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~  107 (165)
                      .+++ -++.||.|..-.||++.... | .+.||.-....... .   -...+...|..+|+....  |..+.-...| |.
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~-~---~~~~~~~~E~~il~~l~h--p~Iv~l~~~~~~~  141 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-R---SDSAFFWEERDIMAFANS--PWVVQLFYAFQDD  141 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-T---CCCSTHHHHHHHHHHCCC--TTBCCEEEEEECS
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhh-h---HHHHHHHHHHHHHHhCCC--CCCCeEEEEEEEC
Confidence            3455 56889999999999999863 4 68888754322111 1   123456788888876642  4444333333 55


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ....+||||++  +..|.+.+..+....    .++.+|...|..+|...
T Consensus       142 ~~~~lV~E~~~--gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~g  188 (410)
T 3v8s_A          142 RYLYMVMEYMP--GGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG  188 (410)
T ss_dssp             SEEEEEECCCT--TEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEeCCC--CCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            56679999997  346777776655433    46778888899999753

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=95.81  E-value=0.028  Score=45.71  Aligned_cols=111  Identities=13%  Similarity=0.132  Sum_probs=74.7

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCC--CCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESW--PMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~--~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~  109 (165)
                      .++.+|.|....||++.+. +| .++||........ ...|  .-...+...|+++|+.+..  | ++++++.  .+...
T Consensus        28 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~E~~~l~~l~h--~-~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           28 TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVL-EDCWIEDPKLGKVTLEIAILSRVEH--A-NIIKVLDIFENQGF  103 (335)
T ss_dssp             EEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSC-TTSEEEETTTEEEEHHHHHHTTCCC--T-TBCCEEEEEECSSE
T ss_pred             EEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcc-cccccchHHHHHHHHHHHHHHhCCC--C-CEeeEEEEEeeCCE
Confidence            5688999999999999875 45 7999976543211 1111  1134566779998877742  3 3444443  34556


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~  151 (165)
                      ..+|||+++ ....|.+.+..+...+     .++.+|...|+.+|..
T Consensus       104 ~~lv~e~~~-~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~  149 (335)
T 3dls_A          104 FQLVMEKHG-SGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK  149 (335)
T ss_dssp             EEEEEECCT-TSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEeCC-CCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            679999997 4557878777664332     4778888899999865

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=95.78  E-value=0.004  Score=51.42  Aligned_cols=109  Identities=12%  Similarity=-0.028  Sum_probs=69.2

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccC-CCCCc--------eEEEE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLC-PDHVP--------EVYHF  105 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~-p~~vP--------~v~~~  105 (165)
                      .+.+|.|....||++.+. +| .++||.-......    -.-..++...|.++|+.+..+- |..+.        .=+..
T Consensus        78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~  153 (377)
T 3byv_A           78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP----PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK  153 (377)
T ss_dssp             EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-C----CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEE
T ss_pred             cceeecCCCEEEEEEEECCCCcEEEEEEEeecccc----chHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhh
Confidence            688999999999999974 45 8999986532211    1123467778887777776542 22111        11222


Q ss_pred             cCC-----------------CceEEEecCCCCchHHHHHHHcCCC------------CHHHHHHHHHHHHHHHhcc
Q 048614          106 DRT-----------------MSLIGMRYLEPPHIILRKGLIAGIK------------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~~-----------------~~~~vMEdL~~~~~~lr~~l~~g~~------------~~~~a~~iG~~La~~h~~t  152 (165)
                      ++.                 +..++||+++  + +|.+.+.+...            .-.++.+|...|+-+|...
T Consensus       154 ~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~--g-~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  226 (377)
T 3byv_A          154 DPQKKKMIRVRLDERDMWVLSRFFLYPRMQ--S-NLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG  226 (377)
T ss_dssp             CTTSCSEEEC------CEEESEEEEEECCS--E-EHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCccccccccCCCceEEEEEEEEEeccC--C-CHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence            221                 3679999996  3 67776664221            1247889999999999864

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=95.78  E-value=0.064  Score=41.49  Aligned_cols=101  Identities=19%  Similarity=0.176  Sum_probs=68.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE------c-
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF------D-  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~------D-  106 (165)
                      .++.+|.|....||++.+. +| .++||.....           .++...|.++|+.+..  |. +.+++.+      + 
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----------~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~   80 (284)
T 2a19_B           15 EIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN-----------NEKAEREVKALAKLDH--VN-IVHYNGCWDGFDYDP   80 (284)
T ss_dssp             EEEEEECSSSCCEEEEEETTTCCEEEEEEEECC-----------SGGGHHHHHHHHHCCC--TT-BCCEEEEEEEEEEC-
T ss_pred             eeeeeccCCceEEEEEEEcCCCeEEEEEEeccc-----------cHHHHHHHHHHHhCCC--CC-EEEEeeeEeccccCc
Confidence            5678999999999999986 45 8999975421           1466788888887742  33 3333332      1 


Q ss_pred             -----------CCCceEEEecCCCCchHHHHHHHcC---CCCH----HHHHHHHHHHHHHHhcc
Q 048614          107 -----------RTMSLIGMRYLEPPHIILRKGLIAG---IKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 -----------~~~~~~vMEdL~~~~~~lr~~l~~g---~~~~----~~a~~iG~~La~~h~~t  152 (165)
                                 .....+|||+++  ...|.+.+...   ....    .++.+|...|..+|...
T Consensus        81 ~~~~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  142 (284)
T 2a19_B           81 ETSSKNSSRSKTKCLFIQMEFCD--KGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK  142 (284)
T ss_dssp             --------CCEEEEEEEEECCCC--SCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccccccccCcceEEEEEeccC--CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                       233679999998  45777777542   2222    47788888999999653

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=95.77  E-value=0.068  Score=43.75  Aligned_cols=101  Identities=11%  Similarity=0.064  Sum_probs=67.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -.+.+|.|....||++.+. +| .++||.-....           .....|.++|...... |. +++++.  .|.....
T Consensus        26 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~-----------~~~~~E~~~l~~~~~h-p~-iv~~~~~~~~~~~~~   92 (342)
T 2qr7_A           26 VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-----------RDPTEEIEILLRYGQH-PN-IITLKDVYDDGKYVY   92 (342)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT-----------CCCHHHHHHHHHHTTS-TT-BCCEEEEEECSSEEE
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc-----------CChHHHHHHHHHhcCC-CC-cCeEEEEEEcCCEEE
Confidence            4578999999999999886 45 79999753211           1224577777766432 33 334433  3555668


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~  151 (165)
                      +|||++.  +..|.+.+.+...+ .    .++.+|...|..+|..
T Consensus        93 lv~E~~~--gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~  135 (342)
T 2qr7_A           93 VVTELMK--GGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ  135 (342)
T ss_dssp             EEECCCC--SCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  34666767665433 2    4777888888888875

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=95.77  E-value=0.044  Score=42.68  Aligned_cols=113  Identities=17%  Similarity=0.001  Sum_probs=66.1

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC--CC---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS--SG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF  105 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~--~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  105 (165)
                      ...+ -++.+|.|....||++...  ++   .++||.-.+.....    .-..++...|.+.|+.+.  .|..++-.-.+
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~   90 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ----PEAMDDFIREVNAMHSLD--HRNLIRLYGVV   90 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC------------CHHHHHHHHHHHHHHHCC--CTTBCCEEEEE
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCC----HHHHHHHHHHHHHHHhCC--CCCcccEEEEE
Confidence            3455 5678999999999999742  22   48888866433210    123456778888887774  24444444444


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+...+|||+++  ...|.+.+...  ...    -.++.+|...|..+|...
T Consensus        91 ~~~~~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  141 (291)
T 1u46_A           91 LTPPMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR  141 (291)
T ss_dssp             CSSSCEEEEECCT--TCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCceeeEeccc--CCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4556789999997  34666666542  222    257788889999999763

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=95.74  E-value=0.074  Score=42.84  Aligned_cols=106  Identities=13%  Similarity=-0.019  Sum_probs=69.6

Q ss_pred             eeEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC
Q 048614           36 TIKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~  108 (165)
                      -.+.+|.|....||++.+.    .+ .++||.-..-..      .-...+...|+++|+.+.   -.++++++.+  +..
T Consensus        53 i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~  123 (325)
T 3kul_A           53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT------ERQRRDFLSEASIMGQFD---HPNIIRLEGVVTRGR  123 (325)
T ss_dssp             EEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC------HHHHHHHHHHHHHHTTCC---CTTBCCEEEEECGGG
T ss_pred             EeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC------HHHHHHHHHHHHHHHhCC---CCCCCcEEEEEEeCC
Confidence            3577999999999999875    22 489997653211      112345677887777663   2344455544  345


Q ss_pred             CceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++  ...|.+.+...  ...    -.++.+|...|..+|...
T Consensus       124 ~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  171 (325)
T 3kul_A          124 LAMIVTEYME--NGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG  171 (325)
T ss_dssp             CCEEEEECCT--TCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccEEEeeCCC--CCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6789999997  34777777543  222    257788888999999653

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=95.74  E-value=0.054  Score=43.08  Aligned_cols=103  Identities=14%  Similarity=0.004  Sum_probs=69.6

Q ss_pred             eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------CC
Q 048614           36 TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR------TM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------~~  109 (165)
                      -++.+|.|....||++...+..++||.-..-          ...+...|.+++....--.| ++.+++.+..      ..
T Consensus        41 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~----------~~~~~~~e~~~~~~~~~~h~-~i~~~~~~~~~~~~~~~~  109 (337)
T 3mdy_A           41 MVKQIGKGRYGEVWMGKWRGEKVAVKVFFTT----------EEASWFRETEIYQTVLMRHE-NILGFIAADIKGTGSWTQ  109 (337)
T ss_dssp             EEEEEEEETTEEEEEEEETTEEEEEEEEEGG----------GHHHHHHHHHHHTSTTCCCT-TBCCEEEEEEESCGGGCE
T ss_pred             EEeEeecCCCeEEEEEEECCceEEEEEEecc----------ccchhhhHHHHHHHHhhcCC-CeeeEEEEEccCCCCCCc
Confidence            5788999999999999987448999975211          22455667666655432223 3445554433      34


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                      ..+||||++  ..+|++.+..+....    .++.++...|+.+|..
T Consensus       110 ~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~  153 (337)
T 3mdy_A          110 LYLITDYHE--NGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTE  153 (337)
T ss_dssp             EEEEECCCT--TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSC
T ss_pred             eEEEEeccC--CCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            679999997  357888876655432    5778888999999975

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=95.73  E-value=0.12  Score=41.25  Aligned_cols=105  Identities=12%  Similarity=-0.029  Sum_probs=69.7

Q ss_pred             eeEecCCCceeEEEEEEeC--CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCC---CCCceEE--EEcC
Q 048614           36 TIKEVGDGNLNFVYIVVGS--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCP---DHVPEVY--HFDR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p---~~vP~v~--~~D~  107 (165)
                      -++.+|.|....||++.+.  ++ .++||....--        ...++...|.++|+.+.....   ..+..++  +.+.
T Consensus        23 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~   94 (355)
T 2eu9_A           23 IVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG--------KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH   94 (355)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH--------HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred             EEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc--------cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence            5788999999999999875  23 68889864221        123577789999988865422   1233333  3445


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~  151 (165)
                      ....+|||+++  ...+ +.+....   ..    -.++.+|...|+.+|..
T Consensus        95 ~~~~lv~e~~~--~~l~-~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~  142 (355)
T 2eu9_A           95 GHMCIAFELLG--KNTF-EFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN  142 (355)
T ss_dssp             TEEEEEEECCC--CBHH-HHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEEeccC--CChH-HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            67789999997  3333 4444332   22    25788889999999975

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=95.70  E-value=0.043  Score=47.49  Aligned_cols=110  Identities=14%  Similarity=0.034  Sum_probs=74.9

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      +.+ -.+.+|.|....||++... +| .++||.-....... .   -..++...|..+|+.+..  | ++.+++.+  ++
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~-~---~~~~~~~~Ei~~l~~l~H--p-nIv~l~~~~~~~   88 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRS-L---DVVGKIRREIQNLKLFRH--P-HIIKLYQVISTP   88 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHH-T---TTHHHHHHHHHHHTTCCC--T-TBCCEEEEEECS
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC-H---HHHHHHHHHHHHHHhCCC--C-CCCcEEEEEEEC
Confidence            344 5678999999999999876 45 89999865432111 1   234678888888876542  3 44555543  56


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ....+||||++  ...|.+.+.++...     -.++.+|...|..+|..
T Consensus        89 ~~~~lv~E~~~--gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~  135 (476)
T 2y94_A           89 SDIFMVMEYVS--GGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH  135 (476)
T ss_dssp             SEEEEEEECCS--SEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            67789999997  35777777654332     24777888888889865

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=95.69  E-value=0.032  Score=43.86  Aligned_cols=107  Identities=12%  Similarity=-0.035  Sum_probs=68.1

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE----cCCC
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF----DRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~----D~~~  109 (165)
                      -.+.+|.|....||++.+. ++ .++||........   ..+-...+...|..+|+.+.  .| ++.+++.+    +...
T Consensus         9 i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~~~E~~~l~~l~--h~-~i~~~~~~~~~~~~~~   82 (305)
T 2wtk_C            9 MGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLR---RIPNGEANVKKEIQLLRRLR--HK-NVIQLVDVLYNEEKQK   82 (305)
T ss_dssp             CCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHH---HSTTHHHHHHHHHHHHTTCC--CT-TBCCEEEEEECC---C
T ss_pred             EeeEEecCCCeEEEEEEECCCCcEEEEEEecccccc---ccchhHHHHHHHHHHHHhcC--CC-CeeEEEEEEEcCCCCe
Confidence            3567888999999999986 34 7999987643211   11233467778888887664  23 34445543    2346


Q ss_pred             ceEEEecCCCCchHHHHHHHc---CCCC----HHHHHHHHHHHHHHHhc
Q 048614          110 SLIGMRYLEPPHIILRKGLIA---GIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~---g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      ..+|||+++. .  +.+.+..   +...    -.++.+|...|..+|..
T Consensus        83 ~~lv~e~~~~-~--l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~  128 (305)
T 2wtk_C           83 MYMVMEYCVC-G--MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ  128 (305)
T ss_dssp             EEEEEECCSE-E--HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEehhccC-C--HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC
Confidence            6899999983 3  4444443   2222    24777889999999976

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=95.67  E-value=0.091  Score=41.95  Aligned_cols=106  Identities=19%  Similarity=0.110  Sum_probs=70.8

Q ss_pred             eeEecCCCceeEEEEEEeC-----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--
Q 048614           36 TIKEVGDGNLNFVYIVVGS-----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR--  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--  107 (165)
                      -++.+|.|....||++.-.     +| .++||.-.....      +-...+...|.++|+.+.  .| ++++++.+-.  
T Consensus        35 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~--h~-~iv~~~~~~~~~  105 (318)
T 3lxp_A           35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG------PQHRSGWKQEIDILRTLY--HE-HIIKYKGCCEDA  105 (318)
T ss_dssp             EEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCC------HHHHHHHHHHHHHHHHCC--CT-TBCCEEEEEEET
T ss_pred             hhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccC------hHHHHHHHHHHHHHHhCC--Cc-chhhEEEEEecC
Confidence            6688999999999887531     34 799998653211      122456778888888776  24 3444554432  


Q ss_pred             --CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          108 --TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 --~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                        ....+|||+++  ...|.+.+.......    .++.+|...|+.+|...
T Consensus       106 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~  154 (318)
T 3lxp_A          106 GAASLQLVMEYVP--LGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQH  154 (318)
T ss_dssp             TTTEEEEEECCCT--TCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEEeccc--CCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              33479999997  457877776655432    57788888999999753

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=95.66  E-value=0.039  Score=42.65  Aligned_cols=106  Identities=12%  Similarity=0.044  Sum_probs=70.2

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      -++.+|.|....||++.+. +| .++||.-...-.      .-..++...|...|+.+.   -.++++++.+  +.....
T Consensus        11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~   81 (276)
T 2yex_A           11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA------VDCPENIKKEICINKMLN---HENVVKFYGHRREGNIQY   81 (276)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC------TTHHHHHHHHHHHHHTCC---CTTBCCEEEEEEETTEEE
T ss_pred             EEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc------hhhhHHHHHHHHHHHhcC---CCCceeeeeEEEcCCEEE
Confidence            4578899999999999886 44 799997643221      123467777888877653   2345555554  344567


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+..+...     -.++.+|...|..+|...
T Consensus        82 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  125 (276)
T 2yex_A           82 LFLEYCS--GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG  125 (276)
T ss_dssp             EEEECCT--TEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecC--CCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  34666655543322     257888889999998653

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=95.66  E-value=0.058  Score=43.10  Aligned_cols=106  Identities=15%  Similarity=-0.019  Sum_probs=70.6

Q ss_pred             eeEecCCCceeEEEEEEeCC------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 048614           36 TIKEVGDGNLNFVYIVVGSS------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      -.+.+|.|....||++....      + .++||.......      .-..++...|..+|+.+... | ++++++.+  +
T Consensus        50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~-~iv~~~~~~~~  121 (333)
T 2i1m_A           50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH------ADEKEALMSELKIMSHLGQH-E-NIVNLLGACTH  121 (333)
T ss_dssp             EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC------HHHHHHHHHHHHHHHHHCCC-T-TBCCEEEEECS
T ss_pred             eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC------hHHHHHHHHHHHHHHhhcCC-C-CeeeEEEEEec
Confidence            45789999999999998642      1 588887653321      12235677888888877432 3 34455543  5


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC---------------CC----HHHHHHHHHHHHHHHhc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGI---------------KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~---------------~~----~~~a~~iG~~La~~h~~  151 (165)
                      .....+|||+++  ..+|.+.+....               ..    -.++.+|...|+.+|..
T Consensus       122 ~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  183 (333)
T 2i1m_A          122 GGPVLVITEYCC--YGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK  183 (333)
T ss_dssp             SSSCEEEEECCT--TEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCceEEEEecCC--CCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC
Confidence            567889999997  346666665321               11    25778899999999975

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=95.65  E-value=0.022  Score=47.62  Aligned_cols=97  Identities=19%  Similarity=0.048  Sum_probs=64.3

Q ss_pred             EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEE
Q 048614           38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~v  113 (165)
                      +.||.|..-.||++.+. +| .|.||.-.    .  ..      ....|..+|+.+.-  |..| ++|.  .|.....+|
T Consensus        64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~----~--~~------~~~~E~~il~~l~H--pnIV-~l~~~~~~~~~~~iv  128 (336)
T 4g3f_A           64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVR----L--EV------FRVEELVACAGLSS--PRIV-PLYGAVREGPWVNIF  128 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEE----T--TT------CCTHHHHTTTTCCC--TTBC-CEEEEEEETTEEEEE
T ss_pred             cEeccCCCeEEEEEEECCCCCEEEEEEEC----H--HH------hHHHHHHHHHhCCC--CCCC-cEEEEEEECCEEEEE
Confidence            45999999999999876 45 79999743    1  10      11247777765532  4433 4443  355566799


Q ss_pred             EecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 048614          114 MRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~  151 (165)
                      |||++  +..|.+.|.+...+ .    .++.+|...|.-+|..
T Consensus       129 mEy~~--gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~  169 (336)
T 4g3f_A          129 MELLE--GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR  169 (336)
T ss_dssp             ECCCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EeccC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99998  44777777654332 2    4677888899999865

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=95.64  E-value=0.18  Score=40.65  Aligned_cols=110  Identities=13%  Similarity=0.050  Sum_probs=72.5

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--  106 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--  106 (165)
                      ...+ -++.+|.|....||++.+. +| .++||.-.....     ..-...+...|.++|+.+..  |. +++++.+-  
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~   87 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-----KEGFPITALREIKILQLLKH--EN-VVNLIEICRT   87 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC-----SSSSCHHHHHHHHHHHHCCC--TT-BCCEEEEEEE
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc-----cccchHHHHHHHHHHHhccC--CC-cccHhheeec
Confidence            3455 5788999999999999985 45 899997653321     12234567789999987752  43 44444432  


Q ss_pred             --------CCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          107 --------RTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 --------~~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                              .....+|||+++  . .+.+.+....  ..    -.++.+|...|+.+|...
T Consensus        88 ~~~~~~~~~~~~~lv~e~~~--~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  144 (351)
T 3mi9_A           88 KASPYNRCKGSIYLVFDFCE--H-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK  144 (351)
T ss_dssp             C--------CEEEEEEECCS--E-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccccCCceEEEEEeccC--C-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                    224579999998  3 5556665532  22    257888889999999653

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=95.63  E-value=0.027  Score=46.57  Aligned_cols=105  Identities=14%  Similarity=0.024  Sum_probs=70.4

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      -.+.+|.|....||++... ++ .|+||...+...      +-...+...|+++|+.+.   -.++++++.+  +.+...
T Consensus       118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~  188 (377)
T 3cbl_A          118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP------PDLKAKFLQEARILKQYS---HPNIVRLIGVCTQKQPIY  188 (377)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSC------HHHHTTTTHHHHHHTTCC---CTTBCCEEEEECSSSSCE
T ss_pred             EeeEeccCCCCeEEEEEEecCCeEEEEEEccccCC------HHHHHHHHHHHHHHHhCC---CCCEEEEEEEEecCCCcE
Confidence            3578999999999999986 45 799998653321      011235567888887663   2345555554  445678


Q ss_pred             EEEecCCCCchHHHHHHHcC-C-CC----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAG-I-KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g-~-~~----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  ...|.+.+... . ..    -.++.+|...|+.+|..
T Consensus       189 lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~  232 (377)
T 3cbl_A          189 IVMELVQ--GGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK  232 (377)
T ss_dssp             EEEECCT--TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  23666666542 1 22    25788889999999975

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=95.63  E-value=0.11  Score=42.31  Aligned_cols=107  Identities=14%  Similarity=0.080  Sum_probs=72.8

Q ss_pred             cc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC---
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDR---  107 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~---  107 (165)
                      .+ -++.+|.|....||++.+. ++ .++||.-.+..      ..-...+...|.++|+.+..  |. +++++.+-.   
T Consensus        28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~E~~~l~~l~h--~n-iv~~~~~~~~~~   98 (364)
T 3qyz_A           28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE------HQTYCQRTLREIKILLRFRH--EN-IIGINDIIRAPT   98 (364)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT------CHHHHHHHHHHHHHHHHCCC--TT-BCCCCEEECCSS
T ss_pred             cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc------CcHHHHHHHHHHHHHHhcCC--CC-CccceeEEecCC
Confidence            45 5678999999999999876 45 79999765322      11233677789888887742  33 334443321   


Q ss_pred             ----CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614          108 ----TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ----~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                          ....+|||+++  . .|.+.+..+....    .++.+|...|+.+|...
T Consensus        99 ~~~~~~~~iv~e~~~--~-~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~  148 (364)
T 3qyz_A           99 IEQMKDVYIVQDLME--T-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN  148 (364)
T ss_dssp             TTTCCCEEEEEECCS--E-EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccceEEEEEcccC--c-CHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                24689999998  3 6777776665433    46788889999999753

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=95.60  E-value=0.019  Score=45.83  Aligned_cols=111  Identities=14%  Similarity=0.043  Sum_probs=66.4

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCCC-----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSSG-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF  105 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  105 (165)
                      ...+ -.+.+|.|....||++.+...     .++||.-.....     ..-..++...|+++|+.+.   -.++++++.+
T Consensus        22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~   93 (323)
T 3qup_A           22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-----ASSDIEEFLREAACMKEFD---HPHVAKLVGV   93 (323)
T ss_dssp             ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-----------CHHHHHHHHHHHHHTTCC---CTTBCCCCEE
T ss_pred             hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc-----CHHHHHHHHHHHHHHHHCC---CCceehhhce
Confidence            4455 568899999999999987532     478887654321     1123567778888887663   2344455543


Q ss_pred             --cCCCc------eEEEecCCCCchHHHHHHHcCC-------CC----HHHHHHHHHHHHHHHhcc
Q 048614          106 --DRTMS------LIGMRYLEPPHIILRKGLIAGI-------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 --D~~~~------~~vMEdL~~~~~~lr~~l~~g~-------~~----~~~a~~iG~~La~~h~~t  152 (165)
                        +....      .++||++.  ...|.+.+....       ..    -.++.+|...|+.+|...
T Consensus        94 ~~~~~~~~~~~~~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~  157 (323)
T 3qup_A           94 SLRSRAKGRLPIPMVILPFMK--HGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN  157 (323)
T ss_dssp             EECC-------CEEEEEECCT--TCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeccccccCCCccEEEEEecc--CCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC
Confidence              33333      89999997  346666664321       11    257888899999999753

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=95.59  E-value=0.054  Score=43.56  Aligned_cols=106  Identities=14%  Similarity=0.087  Sum_probs=71.1

Q ss_pred             EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 048614           38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~v  113 (165)
                      +.+|.|....||++.+. +| .++||........     .-...+...|..+|+.+... | .+++++.+  +.....+|
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~e~~~l~~l~~~-~-~iv~~~~~~~~~~~~~lv  107 (327)
T 3lm5_A           35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG-----QDCRAEILHEIAVLELAKSC-P-RVINLHEVYENTSEIILI  107 (327)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESEETT-----EECHHHHHHHHHHHHHTTTC-T-TBCCEEEEEECSSEEEEE
T ss_pred             ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc-----hHHHHHHHHHHHHHHhccCC-C-CEEEEEEEEEeCCeEEEE
Confidence            78999999999999876 34 8999976533221     12346777888888776542 3 34445443  55667899


Q ss_pred             EecCCCCchHHHHHHHcC--C-CC----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAG--I-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g--~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++.  ...|.+.+...  . ..    -.++.+|...|+.+|...
T Consensus       108 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g  151 (327)
T 3lm5_A          108 LEYAA--GGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN  151 (327)
T ss_dssp             EECCT--TEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecC--CCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99997  33565555432  2 21    257788899999999653

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=95.59  E-value=0.013  Score=46.04  Aligned_cols=110  Identities=12%  Similarity=0.024  Sum_probs=59.1

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFD  106 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D  106 (165)
                      ...+ -.+.+|.|....||++.+. +| .++||.......      .-..++...|..+|+.+   --.++++++  +.+
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~   84 (303)
T 2vwi_A           14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC------QTSMDELLKEIQAMSQC---HHPNIVSYYTSFVV   84 (303)
T ss_dssp             CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------------CCCCC---CCTTBCCEEEEEES
T ss_pred             hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc------chhHHHHHHHHHHHhhc---CCCCEeeEEEEEee
Confidence            3445 6788999999999999875 34 899997642211      11234455565555443   223444444  356


Q ss_pred             CCCceEEEecCCCCchHHHHHHHc---------CCCC----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIA---------GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~---------g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .+...+|||+++  ..+|.+.+..         +...    -.++.+|...|+.+|...
T Consensus        85 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  141 (303)
T 2vwi_A           85 KDELWLVMKLLS--GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG  141 (303)
T ss_dssp             SSCEEEEEECCT--TCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCcEEEehhcc--CCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            678889999997  2355555542         1122    257788899999999753

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=95.56  E-value=0.052  Score=48.93  Aligned_cols=109  Identities=13%  Similarity=0.043  Sum_probs=73.6

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      -+..||.|..-.||++.... + .+.||.-.......    .-..++...|.++|.....  +.+++.++.+  +.+...
T Consensus       345 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~----~~~~~~~~~E~~~l~~~~~--~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          345 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ----DDDVECTMVEKRVLALPGK--PPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             EEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHH----TTTTHHHHHHHHHHTCTTC--CTTBCCEEEECBCSSEEE
T ss_pred             EEEEEccCCCEEEEEEEECCCCcEEEEEEEecccccc----HHHHHHHHHHHHHHHhccC--CCeEEEEEEEEEeCCEEE
Confidence            46789999999999999763 4 68999765332111    1345778888888866543  3445555543  445567


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  ...|...+.....+     -.++.+|...|.-+|...
T Consensus       419 lV~E~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g  462 (674)
T 3pfq_A          419 FVMEYVN--GGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG  462 (674)
T ss_dssp             EEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             EEEeCcC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  34677777653322     246788889999999763

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=95.54  E-value=0.18  Score=40.06  Aligned_cols=107  Identities=15%  Similarity=0.154  Sum_probs=63.2

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      .+..+|.|..-.||++.+. +| .++||......+.     .-...+...|...+....  --..+++++.+  +.....
T Consensus        61 ~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~e~~~~~~~~--~h~~iv~l~~~~~~~~~~~  133 (311)
T 3p1a_A           61 RLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG-----PKDRARKLAEVGSHEKVG--QHPCCVRLEQAWEEGGILY  133 (311)
T ss_dssp             EEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCS-----HHHHHHHHHHHHHHHHHC--CCTTBCCEEEEEEETTEEE
T ss_pred             eeheeccCCCeEEEEEEECCCCeEEEEEEecccccC-----hHHHHHHHHHHHHHHHhc--CCCcEEEEEEEEEeCCEEE
Confidence            4568999999999999887 45 7999974422211     111223333333333221  22334444443  455668


Q ss_pred             EEEecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++.   .|.+.+.. +...     -.++.+|...|+.+|...
T Consensus       134 lv~e~~~~---~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  177 (311)
T 3p1a_A          134 LQTELCGP---SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG  177 (311)
T ss_dssp             EEEECCCC---BHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeccCC---CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999973   34444443 3222     247788999999999653

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=95.54  E-value=0.084  Score=42.61  Aligned_cols=105  Identities=16%  Similarity=0.035  Sum_probs=68.1

Q ss_pred             eeEecCCCceeEEEEEEeCC--C----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 048614           36 TIKEVGDGNLNFVYIVVGSS--G----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~--g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      ..+.+|.|....||++....  +    .++||.-.....      .-...+...|.++|+.+.   -.++++++.+  +.
T Consensus        48 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~  118 (333)
T 1mqb_A           48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT------EKQRVDFLGEAGIMGQFS---HHNIIRLEGVISKY  118 (333)
T ss_dssp             EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC------HHHHHHHHHHHHHHHTCC---CTTBCCEEEEECSS
T ss_pred             cccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC------HHHHHHHHHHHHHHHhCC---CCCCCcEEEEEecC
Confidence            35779999999999997642  1    388887643211      112235566777776653   2345555554  44


Q ss_pred             CCceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~  151 (165)
                      ....+|||+++  ...|.+.+...  ...    -.++.+|...|..+|..
T Consensus       119 ~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  166 (333)
T 1mqb_A          119 KPMMIITEYME--NGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM  166 (333)
T ss_dssp             SSEEEEEECCT--TEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCcEEEEeCCC--CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            56789999997  45777777653  222    25778888999999975

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=95.54  E-value=0.07  Score=43.88  Aligned_cols=112  Identities=9%  Similarity=-0.011  Sum_probs=74.7

Q ss_pred             CCCcc-eeEecCCC--ceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--
Q 048614           31 KFDAL-TIKEVGDG--NLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--  103 (165)
Q Consensus        31 ~~~~~-~v~~l~~G--n~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--  103 (165)
                      ....+ -++.+|.|  ....||++.+. +| .|+||.-.....     -.-...+...|.++|+.+..  |..++ ++  
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~niv~-~~~~   94 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-----SNEMVTFLQGELHVSKLFNH--PNIVP-YRAT   94 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-----CHHHHHHHHHHHHHHHHCCC--TTBCC-EEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-----ChHHHHHHHHHHHHHHhCCC--CCCCc-EeEE
Confidence            44566 67788999  88889999987 45 799997653221     01123566678888887752  44333 33  


Q ss_pred             EEcCCCceEEEecCCCCchHHHHHHHcC---CCC----HHHHHHHHHHHHHHHhcc
Q 048614          104 HFDRTMSLIGMRYLEPPHIILRKGLIAG---IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       104 ~~D~~~~~~vMEdL~~~~~~lr~~l~~g---~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +.+.....+|||+++  +..|.+.+...   ...    ..++.+|...|+-+|...
T Consensus        95 ~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  148 (389)
T 3gni_B           95 FIADNELWVVTSFMA--YGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG  148 (389)
T ss_dssp             EEETTEEEEEEECCT--TCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEECCEEEEEEEccC--CCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            345667789999997  44677766553   222    257778888999999753

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=95.53  E-value=0.085  Score=42.68  Aligned_cols=112  Identities=13%  Similarity=0.070  Sum_probs=72.6

Q ss_pred             cc-eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCC-----CCChHHHHHHHHHHHHhhccCCCCCceEEEE-
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESW-----PMTKERAYFEALALKEHGQLCPDHVPEVYHF-  105 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~-----~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-  105 (165)
                      .+ -.+.+|.|....||++.+.+| .++||.-...... ....     .....+...|.++|+.+..  |.. .+++.+ 
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~i-v~~~~~~   98 (362)
T 3pg1_A           23 PYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSD-GRTVNILSDSFLCKRVLREIRLLNHFHH--PNI-LGLRDIF   98 (362)
T ss_dssp             SCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCT-TSCEEGGGSHHHHHHHHHHHHHHHHCCC--TTB-CCCSEEE
T ss_pred             ceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCc-cchhhhhhhhhHHHHHHHHHHHHHhCCC--cCc-cceeeeE
Confidence            44 568899999999999998777 8999987644321 0110     1123678889999887752  333 333322 


Q ss_pred             ---cCC---CceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          106 ---DRT---MSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 ---D~~---~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                         +..   ...+|||+++  . .+.+.+....  ..    -.++.+|...|..+|...
T Consensus        99 ~~~~~~~~~~~~lv~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  154 (362)
T 3pg1_A           99 VHFEEPAMHKLYLVTELMR--T-DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG  154 (362)
T ss_dssp             EECCTTTCCEEEEEEECCS--E-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EeccCCCcceEEEEEccCC--C-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence               111   3479999998  3 5666666543  22    247788889999999753

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=95.53  E-value=0.044  Score=45.45  Aligned_cols=104  Identities=14%  Similarity=0.112  Sum_probs=64.7

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~  112 (165)
                      .+.||.|....||++.+. +| .++||.-...-.       -..++...|.++|+.+.   -.++++++.  .+.+...+
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~---hpnIv~~~~~~~~~~~~~l  163 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-------KDKEEVKNEISVMNQLD---HANLIQLYDAFESKNDIVL  163 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSH-------HHHHHHHHHHHHHTTCC---CTTBCCEEEEEECSSEEEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-------ccHHHHHHHHHHHHhCC---CCCCCeEEEEEEECCEEEE
Confidence            456999999999999875 45 799997543211       12356777888887663   234455544  35566799


Q ss_pred             EEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  ...|.+.+.+..  ..    -.++.+|...|+.+|...
T Consensus       164 v~E~~~--~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  207 (373)
T 2x4f_A          164 VMEYVD--GGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY  207 (373)
T ss_dssp             EEECCT--TCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeCCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  345666665432  22    246778899999999753

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=95.53  E-value=0.01  Score=47.75  Aligned_cols=110  Identities=9%  Similarity=-0.041  Sum_probs=71.9

Q ss_pred             cc-eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCC-----------CCChHHHHHHHHHHHHhhccCCCCCc
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESW-----------PMTKERAYFEALALKEHGQLCPDHVP  100 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~-----------~l~~~R~~~E~~~L~~~~~~~p~~vP  100 (165)
                      .+ -++.+|.|....||++.+ +| .++||......... ...           ....++...|.++|+.+.  .|. ++
T Consensus        32 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~-i~  106 (348)
T 2pml_X           32 DYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEK-KRDFTKSNNDKISIKSKYDDFKNELQIITDIK--NEY-CL  106 (348)
T ss_dssp             TEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSS-CEEECCCSSSSCCEEEHHHHHHHHHHHHTTCC--CTT-BC
T ss_pred             ceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccc-hhhhccccchhhhHHhHHHHHHHHHHHHHhCC--CCC-cc
Confidence            44 567899999999999999 55 89999876433210 000           011167888888887774  233 33


Q ss_pred             eEE--EEcCCCceEEEecCCCCchHHHHH------HHc--CCCC-----HHHHHHHHHHHHHHHh
Q 048614          101 EVY--HFDRTMSLIGMRYLEPPHIILRKG------LIA--GIKY-----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       101 ~v~--~~D~~~~~~vMEdL~~~~~~lr~~------l~~--g~~~-----~~~a~~iG~~La~~h~  150 (165)
                      +++  +.+.+...+|||+++  ...|.+.      +..  +...     -.++.+|...|+.+|.
T Consensus       107 ~~~~~~~~~~~~~lv~e~~~--~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  169 (348)
T 2pml_X          107 TCEGIITNYDEVYIIYEYME--NDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN  169 (348)
T ss_dssp             CCSEEEESSSEEEEEEECCT--TCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeeCCeEEEEEeccC--CCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc
Confidence            333  346778899999997  3355554      333  1221     2578889999999997

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=95.52  E-value=0.018  Score=51.56  Aligned_cols=105  Identities=14%  Similarity=0.127  Sum_probs=67.1

Q ss_pred             eeEecCCCceeEEEEEEeC--CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--C-
Q 048614           36 TIKEVGDGNLNFVYIVVGS--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT--M-  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~--~-  109 (165)
                      -...+|.|....||++.+.  +| .|+||.-.+.      ...-...+...|.++|+.+.   -.++++++.+-.+  . 
T Consensus        84 i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~------~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~  154 (681)
T 2pzi_A           84 VKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS------GDAEAQAMAMAERQFLAEVV---HPSIVQIFNFVEHTDRH  154 (681)
T ss_dssp             EEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS------CCHHHHHHHHHHHGGGGGCC---CTTBCCEEEEEEEECTT
T ss_pred             EEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc------CCHHHHHHHHHHHHHHHhcC---CCCcCeEeeeEeecCCC
Confidence            4567899999999999875  45 7999976531      11222345667777776553   3456666655332  2 


Q ss_pred             ----ceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          110 ----SLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ----~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                          ..+||||++  +.+|++.+.. ...    -.++.+|...|..+|...
T Consensus       155 ~~~~~~lv~E~~~--g~~L~~~~~~-~l~~~~~~~~~~qi~~aL~~lH~~g  202 (681)
T 2pzi_A          155 GDPVGYIVMEYVG--GQSLKRSKGQ-KLPVAEAIAYLLEILPALSYLHSIG  202 (681)
T ss_dssp             SCEEEEEEEECCC--CEECC----C-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceeEEEEEeCC--CCcHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                489999997  3466665443 322    257888899999999764

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=95.52  E-value=0.082  Score=42.29  Aligned_cols=104  Identities=14%  Similarity=0.118  Sum_probs=61.0

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      .++.+|.|....||++.+. +| .++||.-....      -.-..++...|.++|+.+..  |. +.+++.+  +.+...
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~E~~~l~~l~h--p~-iv~~~~~~~~~~~~~   79 (317)
T 2pmi_A            9 QLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS------EEGTPSTAIREISLMKELKH--EN-IVRLYDVIHTENKLT   79 (317)
T ss_dssp             ----------CEEEEEECSSSCCEEEEEEEECCS------TTCSCHHHHHHHHHHTTCCB--TT-BCCEEEEECCTTEEE
T ss_pred             EeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc------ccccHHHHHHHHHHHHhcCC--CC-cceEEEEEEECCeEE
Confidence            4678999999999999876 34 79999754211      12334677889888877642  43 4444443  445678


Q ss_pred             EEEecCCCCchHHHHHHHcC-------CCC----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAG-------IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g-------~~~----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++ +  .|.+.+...       ...    ..++.+|...|..+|..
T Consensus        80 lv~e~~~-~--~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~  127 (317)
T 2pmi_A           80 LVFEFMD-N--DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN  127 (317)
T ss_dssp             EEEECCC-C--BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEecC-C--CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999998 3  566655432       122    23566889999999975

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=95.46  E-value=0.0073  Score=49.76  Aligned_cols=109  Identities=13%  Similarity=0.123  Sum_probs=66.2

Q ss_pred             cc-eeEecCCCceeEEEEEEeC----CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--E
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--F  105 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~  105 (165)
                      ++ -++.||.|..-.||++...    .+ .+.||.-....... .    ...|...|.++|+.+.-  |. +.++|.  .
T Consensus        25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~-~----~~~~~~~E~~il~~l~H--pn-Iv~l~~~~~   96 (304)
T 3ubd_A           25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV-R----DRVRTKMERDILVEVNH--PF-IVKLHYAFQ   96 (304)
T ss_dssp             GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE-E----ECC------CCCCCCCC--TT-EECEEEEEE
T ss_pred             ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh-H----HHHHHHHHHHHHHHCCC--CC-CCeEEEEEE
Confidence            45 5678999999999999753    23 58888754322110 1    12356678877765431  33 344443  4


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      |++...+||||++  +..|.+.|.+...+ .    .++.+|...|.-+|...
T Consensus        97 ~~~~~~ivmEy~~--gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~  146 (304)
T 3ubd_A           97 TEGKLYLILDFLR--GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG  146 (304)
T ss_dssp             ETTEEEEEECCCT--TCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ECCEEEEEEEcCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6677889999998  34777777664433 2    46678888899999753

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=95.44  E-value=0.11  Score=42.62  Aligned_cols=104  Identities=13%  Similarity=-0.039  Sum_probs=70.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCC---CCCceEE--EEcCC
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCP---DHVPEVY--HFDRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p---~~vP~v~--~~D~~  108 (165)
                      -.+.||.|....||++.+. +| .|+||.-...-        ....+...|.++|+.+.....   .+++.++  +.+..
T Consensus        58 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  129 (382)
T 2vx3_A           58 IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--------AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN  129 (382)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH--------HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred             EEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH--------HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence            4578999999999999876 44 79999764221        123567778888887765421   2344444  33557


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHh
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~  150 (165)
                      ...+|||+++  . .|.+.+....   ..    -.++.+|...|+-+|.
T Consensus       130 ~~~lv~e~~~--~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~  175 (382)
T 2vx3_A          130 HLCLVFEMLS--Y-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT  175 (382)
T ss_dssp             EEEEEEECCC--C-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS
T ss_pred             ceEEEEecCC--C-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            7789999997  3 6777776543   22    2577888888888884

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=95.44  E-value=0.12  Score=46.01  Aligned_cols=103  Identities=19%  Similarity=-0.011  Sum_probs=70.6

Q ss_pred             ecCCCceeEEEEEEeC---CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 048614           39 EVGDGNLNFVYIVVGS---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rv~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vM  114 (165)
                      .||.|..-.||++...   ++ .|.||.-..-.      -....++...|+++|+.+.  -|..+.-.-.+..+...+||
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~------~~~~~~~~~~E~~il~~l~--hpniv~l~~~~~~~~~~lv~  414 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT------EKADTEEMMREAQIMHQLD--NPYIVRLIGVCQAEALMLVM  414 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCC------SSTTHHHHHHHHHHHTTCC--CTTBCCEEEEEESSSEEEEE
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC------ChHHHHHHHHHHHHHHhCC--CCCEeeEEEEeccCCeEEEE
Confidence            6899999999998653   33 68889865321      1245678888999987663  24444433344456778999


Q ss_pred             ecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhc
Q 048614          115 RYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       115 EdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~  151 (165)
                      ||++  ...|.+.|....  ..    -.++.+|...|+-+|..
T Consensus       415 E~~~--~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~  455 (613)
T 2ozo_A          415 EMAG--GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK  455 (613)
T ss_dssp             ECCT--TCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeCC--CCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9998  347777775432  11    25788899999999965

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=95.43  E-value=0.11  Score=43.82  Aligned_cols=105  Identities=13%  Similarity=0.013  Sum_probs=70.9

Q ss_pred             eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCC---CCCceEEEE--cCC
Q 048614           36 TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCP---DHVPEVYHF--DRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p---~~vP~v~~~--D~~  108 (165)
                      -++.||.|..-.||++.+.. + .|+||.-..--+        ...+...|.++|+.+.....   ..+..++.+  +..
T Consensus       101 ~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~--------~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  172 (429)
T 3kvw_A          101 VLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR--------FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN  172 (429)
T ss_dssp             EEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHH--------HHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred             EEEEcccCccEEEEEEEECCCCcEEEEEEECCccc--------hHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence            36789999999999998764 4 799997643211        12456678888888876422   134444432  346


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~  151 (165)
                      ...+|||+++ .  .|.+.+....   ..    -.++.+|...|+.+|..
T Consensus       173 ~~~lv~e~~~-~--~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  219 (429)
T 3kvw_A          173 HICMTFELLS-M--NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN  219 (429)
T ss_dssp             EEEEEECCCC-C--BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeccC-C--CHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            6779999997 2  5666665543   11    25788889999999965

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=95.36  E-value=0.096  Score=47.96  Aligned_cols=113  Identities=13%  Similarity=0.032  Sum_probs=75.5

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccC-CCCCceEE-EEc
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGQLC-PDHVPEVY-HFD  106 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~-p~~vP~v~-~~D  106 (165)
                      .+. -++.||.|..--||++... +| .+.||.-... +..     .-.......|...|+.+..+- |..|.-.+ +.|
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~-----~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~  263 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-----KQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT  263 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-----TTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcch-----hhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE
Confidence            345 4578999999999999876 45 7888864321 111     123456677777787776653 54444333 346


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ++...+||||++  +..|...|.+...+ .    .++.+|...|.-+|...
T Consensus       264 ~~~lylVmEy~~--GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~g  312 (689)
T 3v5w_A          264 PDKLSFILDLMN--GGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF  312 (689)
T ss_dssp             SSEEEEEECCCC--SCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CCEEEEEEecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            777889999998  34677777664433 2    36778888888888654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=95.35  E-value=0.13  Score=40.10  Aligned_cols=105  Identities=13%  Similarity=-0.018  Sum_probs=68.6

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      ....+|.|....||++.+. ++ .++||.....-       .-..++...|...|+.+..  |. +++++.  .+.....
T Consensus        26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~e~~~l~~l~h--~~-iv~~~~~~~~~~~~~   95 (295)
T 2clq_A           26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-------SRYSQPLHEEIALHKHLKH--KN-IVQYLGSFSENGFIK   95 (295)
T ss_dssp             SBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-------C---HHHHHHHHHHHTCCC--TT-BCCEEEEEEETTEEE
T ss_pred             CcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-------hHHHHHHHHHHHHHHhCCC--CC-EeeEeeEEEeCCcEE
Confidence            3446899999999999975 34 78999754211       1234677788888877632  43 333433  3455678


Q ss_pred             EEEecCCCCchHHHHHHHcCC---CC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI---KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~---~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+....   ..     ..++.+|...|..+|...
T Consensus        96 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  142 (295)
T 2clq_A           96 IFMEQVP--GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ  142 (295)
T ss_dssp             EEEECCS--EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCC--CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  457777776532   11     235778999999999753

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=95.35  E-value=0.043  Score=43.56  Aligned_cols=106  Identities=21%  Similarity=0.173  Sum_probs=67.6

Q ss_pred             eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 048614           36 TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      -.+.+|.|....||++...      .+ .++||.-.....      .-...+...|.++|+.+.  .| ++++++.+  +
T Consensus        29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~--h~-~i~~~~~~~~~   99 (322)
T 1p4o_A           29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS------MRERIEFLNEASVMKEFN--CH-HVVRLLGVVSQ   99 (322)
T ss_dssp             EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC------HHHHHHHHHHHHHGGGCC--CT-TBCCEEEEECS
T ss_pred             eeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC------HHHHHHHHHHHHHHHhcC--CC-CEeeeEEEEcc
Confidence            4678999999999998754      23 688897652211      111234556777776553  24 45555543  5


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcC-----------CCC----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAG-----------IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g-----------~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+|||+++  ..+|.+.+...           ...    -.++.+|...|..+|...
T Consensus       100 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  158 (322)
T 1p4o_A          100 GQPTLVIMELMT--RGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK  158 (322)
T ss_dssp             SSSCEEEEECCT--TCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCccEEEEEeCC--CCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence            567789999997  34666665431           111    247788999999999753

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=95.32  E-value=0.092  Score=43.02  Aligned_cols=106  Identities=13%  Similarity=0.057  Sum_probs=70.6

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      -.+.+|.|....||++.+. +| .++||.-....... .   -...+...|.++|+.+..  | ++++++.+  ++....
T Consensus        13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~-~---~~~~~~~~E~~~l~~l~h--p-nIv~l~~~~~~~~~~~   85 (336)
T 3h4j_B           13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK-S---DMHMRVEREISYLKLLRH--P-HIIKLYDVITTPTDIV   85 (336)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH-T---TCSHHHHHHHHHHTTCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccc-h---hHHHHHHHHHHHHHhCCC--C-CCCeEEEEEEeCCEEE
Confidence            5678999999999999975 44 89999765332111 1   123577888888876642  3 34445443  556678


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~  151 (165)
                      +||||++  . .+.+.+.+.. ..    ..++.+|...|..+|..
T Consensus        86 lv~E~~~--g-~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~  127 (336)
T 3h4j_B           86 MVIEYAG--G-ELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH  127 (336)
T ss_dssp             EEECCCC--E-EHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCC--C-cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999996  3 4555555433 32    25677888888888865

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=95.28  E-value=0.12  Score=42.45  Aligned_cols=105  Identities=19%  Similarity=0.118  Sum_probs=67.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCC-c-
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DRTM-S-  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~~~-~-  110 (165)
                      ..+.+|.|....||++.+. +| .++||.-..-.     .......+...|..+|+.+..  |.. ++++.+ .... . 
T Consensus        46 ~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~E~~~l~~l~h--~ni-v~~~~~~~~~~~~~  117 (371)
T 4exu_A           46 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-----QSEIFAKRAYRELLLLKHMQH--ENV-IGLLDVFTPASSLR  117 (371)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-----SSHHHHHHHHHHHHHHHHCCC--TTB-CCCSEEECSCSSST
T ss_pred             EEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-----cchhHHHHHHHHHHHHHhcCC--CCc-hhhhhheeccCCcc
Confidence            5678999999999999876 45 79999754211     112234677788888887752  443 333333 2222 2 


Q ss_pred             -----eEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          111 -----LIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 -----~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                           .+|||+++  . .|.+.+. +...    -.++.+|...|+.+|...
T Consensus       118 ~~~~~~lv~e~~~--~-~l~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~  164 (371)
T 4exu_A          118 NFYDFYLVMPFMQ--T-DLQKIMG-MEFSEEKIQYLVYQMLKGLKYIHSAG  164 (371)
T ss_dssp             TCCCCEEEEECCC--E-EHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cceeEEEEEcccc--c-cHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                 89999998  2 4555442 2222    246778889999999753

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=95.27  E-value=0.098  Score=44.69  Aligned_cols=106  Identities=12%  Similarity=0.095  Sum_probs=68.7

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -.+.+|.|....||++.+. +| .+.+|.-....-.     .-...+...|.++|+.+..  |. +++++.  .+.....
T Consensus        15 i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~-----~~~~~~~~~E~~il~~l~h--pn-Iv~l~~~~~~~~~~~   86 (444)
T 3soa_A           15 LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS-----ARDHQKLEREARICRLLKH--PN-IVRLHDSISEEGHHY   86 (444)
T ss_dssp             EEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH-----HHHHHHHHHHHHHHHHCCB--TT-BCCEEEEEECSSEEE
T ss_pred             EEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC-----HHHHHHHHHHHHHHHhCCC--cC-CCeEEEEEEECCEEE
Confidence            4678999999999999875 45 7888865422110     0123566788888887742  43 334443  3556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||++.  ...|.+.+.+...+     ..++.+|...|+.+|..
T Consensus        87 lv~E~~~--gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~  129 (444)
T 3soa_A           87 LIFDLVT--GGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM  129 (444)
T ss_dssp             EEECCCB--CCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  33666666665433     25778888889989865

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=95.22  E-value=0.11  Score=44.36  Aligned_cols=111  Identities=14%  Similarity=0.010  Sum_probs=72.6

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      +++ -++.||.|..-.||++.... + .+.||.-....... .   ........|..+|+...  .| ++.+++.  .|.
T Consensus        74 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~-~---~~~~~~~~E~~il~~~~--hp-~Iv~l~~~~~~~  146 (437)
T 4aw2_A           74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK-R---AETACFREERDVLVNGD--SK-WITTLHYAFQDD  146 (437)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH-T---TTTCCHHHHHHHHHHSC--TT-TBCCEEEEEECS
T ss_pred             hheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhh-H---HHHHHHHHHHHHHHhCC--CC-CEEEEEEEEeeC
Confidence            455 56889999999999999874 4 68888764322111 1   12234677888887652  23 3444443  356


Q ss_pred             CCceEEEecCCCCchHHHHHHHc--CCCCH----HHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIA--GIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~--g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +...+||||++  ...|.+.|.+  +....    .++.+|...|..+|...
T Consensus       147 ~~~~lV~Ey~~--gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g  195 (437)
T 4aw2_A          147 NNLYLVMDYYV--GGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH  195 (437)
T ss_dssp             SEEEEEECCCT--TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEecCC--CCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            66789999997  3478787876  23322    36778888888888653

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=95.21  E-value=0.11  Score=42.16  Aligned_cols=104  Identities=13%  Similarity=0.057  Sum_probs=71.4

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeCC---------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhc--cC----
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGSS---------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQ--LC----   95 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~~---------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~--~~----   95 (165)
                      ..+ -.+.+|.|....||++.+..         + .++||.....            ++...|.++|+.+..  ++    
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------------~~~~~E~~~l~~l~h~niv~~~~  109 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------------GRLFNEQNFFQRAAKPLQVNKWK  109 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------------STHHHHHHHHHHHCCHHHHHHHH
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------------chHHHHHHHHHHhcccchhhhhh
Confidence            345 56889999999999998763         5 7888875311            467788888877643  11    


Q ss_pred             ------CCCCceEEEEc---CCCceEEEecCCCCchHHHHHHHcC---CCC----HHHHHHHHHHHHHHHhc
Q 048614           96 ------PDHVPEVYHFD---RTMSLIGMRYLEPPHIILRKGLIAG---IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus        96 ------p~~vP~v~~~D---~~~~~~vMEdL~~~~~~lr~~l~~g---~~~----~~~a~~iG~~La~~h~~  151 (165)
                            ...+|.++.+.   .....+|||+++   .+|.+.+...   ...    -.++.+|...|..+|..
T Consensus       110 ~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~~---~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~  178 (352)
T 2jii_A          110 KLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLG---RSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN  178 (352)
T ss_dssp             HHTTCTTCSCCCCCEEEEETTTEEEEEEECCC---EEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhccCCccCccchhhccccCCcEEEEEecCCC---cCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence                  13466666554   456689999995   3677777653   222    25788889999999975

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=95.19  E-value=0.019  Score=48.57  Aligned_cols=106  Identities=14%  Similarity=0.081  Sum_probs=62.2

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -++.||.|....||++.+. +| .+.||.-.......    .-...+...|.++|+.+.  -| +++.++.  .+.+...
T Consensus       152 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~--h~-~iv~l~~~~~~~~~~~  224 (446)
T 4ejn_A          152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA----KDEVAHTLTENRVLQNSR--HP-FLTALKYSFQTHDRLC  224 (446)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-----------------CCCCCS--CT-TSCCEEEEEEETTEEE
T ss_pred             EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhh----hHHHHHHHHHHHHHHhCC--CC-eEeeEEEEEeeCCEEE
Confidence            4678999999999999876 44 79999765332211    112234556666654433  24 3444443  3445567


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHh
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~  150 (165)
                      +||||++  ...|...+..+..+     -.++.+|...|+-+|.
T Consensus       225 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~  266 (446)
T 4ejn_A          225 FVMEYAN--GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS  266 (446)
T ss_dssp             EEECCCS--SCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeeCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            9999998  34666666654433     2467788999999996

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=95.15  E-value=0.34  Score=37.95  Aligned_cols=107  Identities=13%  Similarity=0.080  Sum_probs=56.2

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      .+..+|.|....||++.+. +| .++||.......      .-...+...|...+  ...+--.++++++.  .+.+...
T Consensus        29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~~~~~--~~~~~h~~i~~~~~~~~~~~~~~  100 (318)
T 2dyl_A           29 NLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN------KEENKRILMDLDVV--LKSHDCPYIVQCFGTFITNTDVF  100 (318)
T ss_dssp             EEEEC------CEEEEEETTTCCEEEEEEEETTSC------HHHHHHHHHHHHHH--HHTTTCTTBCCEEEEEECSSEEE
T ss_pred             ccceeeecCCeeEEEEEEecCCeEEEEEEeccccc------chHHHHHHHHHHHH--HHhcCCCceeeEEEEEecCCcEE
Confidence            4678999999999999986 45 899997642211      11112333333322  22222234555554  3566779


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                      +|||+++.....+... ..+....    .++.+|...|+.+|..
T Consensus       101 lv~e~~~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~  143 (318)
T 2dyl_A          101 IAMELMGTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEK  143 (318)
T ss_dssp             EEECCCSEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeccCCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            9999997322222221 1233322    5778888999999973

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=95.14  E-value=0.077  Score=41.40  Aligned_cols=105  Identities=13%  Similarity=0.027  Sum_probs=67.8

Q ss_pred             eEecCCCceeEEEEEEeCC----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC
Q 048614           37 IKEVGDGNLNFVYIVVGSS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTM  109 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~  109 (165)
                      .+.+|.|....||++...+    + .++||.......      .-..++...|..+|+.+.  .|..+ +++.+  +.+.
T Consensus        26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~E~~~l~~l~--h~~iv-~~~~~~~~~~~   96 (298)
T 3pls_A           26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE------MQQVEAFLREGLLMRGLN--HPNVL-ALIGIMLPPEG   96 (298)
T ss_dssp             EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS------HHHHHHHHHHHHHHHTCC--CTTBC-CCCEEECCSSS
T ss_pred             CceeccCCCceEEEEEEecCCCceeeeeeeecccccc------HHHHHHHHHHHHHHHhCC--CCCee-eEEEEEecCCC
Confidence            3789999999999997532    2 477777542111      122356677888887764  24444 34433  3344


Q ss_pred             c-eEEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614          110 S-LIGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~-~~vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      . .++||++.  ...|.+.+.... ..     -.++.+|...|+.+|...
T Consensus        97 ~~~~v~e~~~--~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  144 (298)
T 3pls_A           97 LPHVLLPYMC--HGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK  144 (298)
T ss_dssp             CCEEEECCCT--TCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CcEEEEeccc--CCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4 79999997  347777777632 22     256778899999999753

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=95.12  E-value=0.097  Score=46.38  Aligned_cols=103  Identities=15%  Similarity=0.110  Sum_probs=69.5

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~  112 (165)
                      .+.||.|..-.||++.+. +| .+.||.-...       -....++...|..+|+.+..  |. +-+++  +.|.....+
T Consensus       162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~-------~~~~~~~~~~Ei~il~~l~h--pn-Iv~l~~~~~~~~~~~i  231 (573)
T 3uto_A          162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTP-------HESDKETVRKEIQTMSVLRH--PT-LVNLHDAFEDDNEMVM  231 (573)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------SHHHHHHHHHHHHHHHHTCC--TT-BCCEEEEEECSSEEEE
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEecc-------chhhHHHHHHHHHHHHhCCC--CC-CCeEEEEEEECCEEEE
Confidence            578999999999999876 45 7888863211       11234677789999987752  33 33333  347778899


Q ss_pred             EEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhc
Q 048614          113 GMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ||||++ + ..|.+.|.+.. .+     ..++.+|...|.-+|..
T Consensus       232 v~E~~~-g-g~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~  274 (573)
T 3uto_A          232 IYEFMS-G-GELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN  274 (573)
T ss_dssp             EEECCC-C-CBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeecC-C-CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999998 3 46777775422 22     24667888888888864

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=95.12  E-value=0.12  Score=43.47  Aligned_cols=106  Identities=14%  Similarity=0.043  Sum_probs=65.0

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      -++.||.|....||++.+. +| .|.||.-.....     -.....|...|.++|+.+.   -.++.+++.+-       
T Consensus        57 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~-----~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~  128 (458)
T 3rp9_A           57 IRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE-----DLIDCKRILREIAILNRLN---HDHVVKVLDIVIPKDVEK  128 (458)
T ss_dssp             ECCC-------CEEEEEECC--CEEEEEEECSTTS-----SHHHHHHHHHHHHHHHHCC---CTTBCCEEEECCCSCTTT
T ss_pred             EeeEeeecCCeEEEEEEECCCCcEEEEEEechhhc-----CHHHHHHHHHHHHHHHhCC---CCCCCceEEEEecCCccc
Confidence            4567899999999999876 44 799997643221     1234578888999998874   23445555442       


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+|||+++  . .|.+.+..+...     -.++.+|...|.-+|...
T Consensus       129 ~~~~~lv~e~~~--~-~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~  176 (458)
T 3rp9_A          129 FDELYVVLEIAD--S-DFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG  176 (458)
T ss_dssp             CCCEEEEECCCS--E-EHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEEeccc--c-chhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            134689999886  2 577777766533     247788889999999653

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=95.06  E-value=0.031  Score=45.32  Aligned_cols=106  Identities=20%  Similarity=0.114  Sum_probs=67.1

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-----
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT-----  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~-----  108 (165)
                      ..+.+|.|....||++.+. +| .++||.-..-.     .......+...|..+|+.+.  .|..++-+-.+...     
T Consensus        28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~~  100 (353)
T 3coi_A           28 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-----QSEIFAKRAYRELLLLKHMQ--HENVIGLLDVFTPASSLRN  100 (353)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-----SSHHHHHHHHHHHHHHHHCC--CTTBCCCSEEECSCSSGGG
T ss_pred             EeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-----cchHHHHHHHHHHHHHHhcC--CCCcccHhheEeccccccc
Confidence            5678999999999999876 45 89999764211     11123456778888888764  24433322222222     


Q ss_pred             --CceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          109 --MSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 --~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                        ...+|||+++.   .|.+.+. ....    -.++.+|...|..+|...
T Consensus       101 ~~~~~lv~e~~~~---~l~~~~~-~~~~~~~~~~i~~qi~~al~~LH~~~  146 (353)
T 3coi_A          101 FYDFYLVMPFMQT---DLQKIMG-LKFSEEKIQYLVYQMLKGLKYIHSAG  146 (353)
T ss_dssp             CCCCEEEEECCSE---EGGGTTT-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceeEEEEeccccC---CHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              23899999972   4544432 2222    247788889999999753

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=94.99  E-value=0.11  Score=41.92  Aligned_cols=108  Identities=10%  Similarity=-0.000  Sum_probs=71.8

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccC--------CCCCce
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLC--------PDHVPE  101 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~--------p~~vP~  101 (165)
                      ..+ -++.+|.|....||++.+. +| .++||.-..-        ....++...|..+|+.+....        -.++++
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~   90 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD--------KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILK   90 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--------HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCC
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC--------ccchhhhhHHHHHHHHhhcccccchhccccchHHH
Confidence            445 6788999999999999975 45 8999975421        123466778888888876421        123444


Q ss_pred             EEEEcC------CCceEEEecCCCCchHHHHHHHcC---CCC----HHHHHHHHHHHHHHHhc
Q 048614          102 VYHFDR------TMSLIGMRYLEPPHIILRKGLIAG---IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       102 v~~~D~------~~~~~vMEdL~~~~~~lr~~l~~g---~~~----~~~a~~iG~~La~~h~~  151 (165)
                      ++.+-.      ....++||+++   ..|.+.+...   ...    -.++.+|...|+.+|..
T Consensus        91 ~~~~~~~~~~~~~~~~lv~e~~~---~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~  150 (373)
T 1q8y_A           91 LLDHFNHKGPNGVHVVMVFEVLG---ENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR  150 (373)
T ss_dssp             CCEEEEEEETTEEEEEEEECCCC---EEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHhhccCCCCceEEEEEecCC---CCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            443322      25789999996   2565666542   222    25788899999999986

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=94.98  E-value=0.13  Score=42.44  Aligned_cols=106  Identities=13%  Similarity=0.066  Sum_probs=63.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      .++.+|.|....||++.+. +| .|+||.-..-..     -.....|...|.++|+.+..  |. +.+++.+-       
T Consensus        33 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--pn-Iv~~~~~~~~~~~~~  104 (367)
T 2fst_X           33 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----SIIHAKRTYRELRLLKHMKH--EN-VIGLLDVFTPARSLE  104 (367)
T ss_dssp             EEEECC----CCEEEEEETTTTEEEEEEECSSTTS-----SHHHHHHHHHHHHHHHHCCC--TT-BCCCSEEECSCSSGG
T ss_pred             EeeEEeecCCeEEEEEEECCCCCEEEEEEeCcccc-----CHHHHHHHHHHHHHHHhCCC--CC-CCcEEEEEecCCccc
Confidence            5678999999999999875 45 899997643211     12334677889998887752  33 33333321       


Q ss_pred             -CCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          107 -RTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 -~~~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                       .....++||+++.   .|.+.+..+...    -.++.+|...|..+|...
T Consensus       105 ~~~~~~lv~e~~~~---~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g  152 (367)
T 2fst_X          105 EFNDVYLVTHLMGA---DLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD  152 (367)
T ss_dssp             GCCCCEEEEECCCE---ECC-----CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCeEEEEecccCC---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             1446889998862   455544444433    247788899999999753

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=94.93  E-value=0.23  Score=40.68  Aligned_cols=105  Identities=15%  Similarity=0.079  Sum_probs=68.2

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-----
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT-----  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~-----  108 (165)
                      .++.+|.|....||++.+. +| .++||.-.....     -.....+...|..+|+.+..  | ++.+++.+-..     
T Consensus        29 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--p-niv~~~~~~~~~~~~~  100 (371)
T 2xrw_A           29 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-----NQTHAKRAYRELVLMKCVNH--K-NIIGLLNVFTPQKSLE  100 (371)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS-----SHHHHHHHHHHHHHHHHCCC--T-TBCCEEEEECSCCSTT
T ss_pred             EeeeeEecCCEEEEEEEECCCCceEEEEEeccccC-----ChHHHHHHHHHHHHHHhcCC--C-CccceEEeeccccccc
Confidence            5678999999999999876 45 799997542111     11223566778888876642  3 34444443222     


Q ss_pred             ---CceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          109 ---MSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ---~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                         ...+|||+++ .  .+.+.+.. ...    ..++.+|...|+.+|...
T Consensus       101 ~~~~~~lv~e~~~-~--~l~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~  147 (371)
T 2xrw_A          101 EFQDVYIVMELMD-A--NLCQVIQM-ELDHERMSYLLYQMLCGIKHLHSAG  147 (371)
T ss_dssp             TCCEEEEEEECCS-E--EHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccceEEEEEcCC-C--CHHHHHhh-ccCHHHHHHHHHHHHHHHHHHHHCC
Confidence               3589999998 2  46666643 332    247788899999999753

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=94.93  E-value=0.072  Score=42.75  Aligned_cols=105  Identities=14%  Similarity=0.062  Sum_probs=67.6

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      .++.+|.|....||++.+. +| .++||.-......   ..   ..+...|.++|+.+.   -.++++++.+  +.....
T Consensus         6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~---~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~   76 (324)
T 3mtl_A            6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE---GA---PCTAIREVSLLKDLK---HANIVTLHDIIHTEKSLT   76 (324)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECC------------CCCCCCCHHHHSCCC---CTTBCCEEEEEECSSCEE
T ss_pred             EEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc---cc---chhHHHHHHHHHhcC---CCCCCeeeeEEeeCCEEE
Confidence            5678999999999999986 44 7999976432211   01   112234777776654   2345555543  566779


Q ss_pred             EEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  . .+.+.+... ...     ..++.+|...|+.+|...
T Consensus        77 lv~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  120 (324)
T 3mtl_A           77 LVFEYLD--K-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK  120 (324)
T ss_dssp             EEEECCS--E-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecccc--c-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  3 566666553 322     246778889999999653

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=94.92  E-value=0.046  Score=43.29  Aligned_cols=111  Identities=14%  Similarity=0.017  Sum_probs=67.0

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCC----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF  105 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  105 (165)
                      ...+ -.+.+|.|....||++....    + .++||.......     -.-..++...|...|+.+.  .|. +.+++.+
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~e~~~l~~l~--h~~-iv~~~~~  104 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-----SQREIEEFLSEAACMKDFS--HPN-VIRLLGV  104 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-----CHHHHHHHHHHHHHHHTCC--CTT-BCCCCEE
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-----chhHHHHHHHHHHHHhcCC--CCC-eeeeeEE
Confidence            4455 45668999999999997642    2 589998653211     1112356677888887764  233 3444443


Q ss_pred             c--CC-----CceEEEecCCCCchHHHHHHHcC------CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          106 D--RT-----MSLIGMRYLEPPHIILRKGLIAG------IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D--~~-----~~~~vMEdL~~~~~~lr~~l~~g------~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      -  ..     ...+|||+++  +..|.+.+...      ...     -.++.+|...|..+|...
T Consensus       105 ~~~~~~~~~~~~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  167 (313)
T 3brb_A          105 CIEMSSQGIPKPMVILPFMK--YGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN  167 (313)
T ss_dssp             EEC-------CEEEEEECCT--TCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EeeccccCCcccEEEEeccc--CCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            2  22     2389999997  45777777421      212     257788899999999763

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=94.91  E-value=0.17  Score=42.28  Aligned_cols=106  Identities=11%  Similarity=-0.045  Sum_probs=67.5

Q ss_pred             eEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-E-cC
Q 048614           37 IKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-F-DR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~-D~  107 (165)
                      .+.||.|..-.||++...      ++ .|.||.-..-..      .-...+...|.++|+.+... | ++-++|. + ++
T Consensus        69 ~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~------~~~~~~~~~E~~il~~l~hh-p-nIV~l~g~~~~~  140 (353)
T 4ase_A           69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT------HSEHRALMSELKILIHIGHH-L-NVVNLLGACTKP  140 (353)
T ss_dssp             EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC------HHHHHHHHHHHHHHHHHCCC-T-TBCCEEEEECCT
T ss_pred             eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC------hHHHHHHHHHHHHHHHcCCC-C-cEEEEEEEEEec
Confidence            467999999999999753      12 466776432211      11234566788888776431 2 3445554 3 33


Q ss_pred             C-CceEEEecCCCCchHHHHHHHcCC-----------------C----CHHHHHHHHHHHHHHHhcc
Q 048614          108 T-MSLIGMRYLEPPHIILRKGLIAGI-----------------K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~-~~~~vMEdL~~~~~~lr~~l~~g~-----------------~----~~~~a~~iG~~La~~h~~t  152 (165)
                      . ...+||||++  ..+|.+.|.+..                 .    .-.++.+|+..|.-+|...
T Consensus       141 ~~~~~iV~Ey~~--~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~  205 (353)
T 4ase_A          141 GGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK  205 (353)
T ss_dssp             TSCCEEEEECCT--TEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEEEEcCC--CCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC
Confidence            3 3579999998  458888876421                 1    1257889999999998753

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=94.85  E-value=0.1  Score=44.12  Aligned_cols=111  Identities=14%  Similarity=0.071  Sum_probs=71.5

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFD  106 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D  106 (165)
                      .+++ -++.||.|....||++... +| .+.||.-.......    .-..++...|..+|+....  | ++++++  +.|
T Consensus        60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~----~~~~~~~~~E~~il~~~~h--p-~Iv~l~~~~~~  132 (412)
T 2vd5_A           60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK----RGEVSCFREERDVLVNGDR--R-WITQLHFAFQD  132 (412)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH----HGGGCCHHHHHHHHHHSCT--T-TBCCEEEEEEC
T ss_pred             hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhh----HHHHHHHHHHHHHHHhcCC--C-CeeeEEEEEee
Confidence            3455 5678999999999999986 45 78999764321110    0112356778888866532  3 344443  335


Q ss_pred             CCCceEEEecCCCCchHHHHHHHc-CCCC-H----HHHHHHHHHHHHHHhc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIA-GIKY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~-g~~~-~----~~a~~iG~~La~~h~~  151 (165)
                      .+...+||||++  ...|.+.+.+ +..+ .    .++.+|...|..+|..
T Consensus       133 ~~~~~lVmE~~~--gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~  181 (412)
T 2vd5_A          133 ENYLYLVMEYYV--GGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL  181 (412)
T ss_dssp             SSEEEEEECCCC--SCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEEEcCCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            556689999997  3477777765 3333 2    3577888889999975

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=94.82  E-value=0.06  Score=44.86  Aligned_cols=111  Identities=10%  Similarity=0.027  Sum_probs=63.4

Q ss_pred             cc-eeEecCCCceeEEEEEEeCC-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGSS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT  108 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~  108 (165)
                      ++ -++.||.|....||++.... + .+.||.-.......    .-...+...|...|  +..+--.++++++.  .+.+
T Consensus        39 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~----~~~~~~~~~e~~~l--l~~~~hp~Iv~l~~~~~~~~  112 (373)
T 2r5t_A           39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK----KKEEKHIMSERNVL--LKNVKHPFLVGLHFSFQTAD  112 (373)
T ss_dssp             GEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-----------------CC--BCCCCCTTBCCEEEEEECSS
T ss_pred             heEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh----hHHHHHHHHHHHHH--HHhCCCCCCCCEEEEEEeCC
Confidence            44 57889999999999999864 4 68888754322110    01122333343332  11222224444443  3556


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++  +..|.+.+.+...++     .++.+|...|..+|...
T Consensus       113 ~~~lv~E~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g  159 (373)
T 2r5t_A          113 KLYFVLDYIN--GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN  159 (373)
T ss_dssp             EEEEEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7789999998  346666666544332     36788899999999753

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=94.81  E-value=0.29  Score=38.59  Aligned_cols=105  Identities=14%  Similarity=0.115  Sum_probs=66.9

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      -.+.+|.|....||++.+. +| .++||.-...-       .-...+...|...|+.+... |. +.+++.+-       
T Consensus        32 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~e~~~l~~l~~h-~~-iv~~~~~~~~~~~~~  102 (337)
T 3ll6_A           32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-------EEKNRAIIQEVCFMKKLSGH-PN-IVQFCSAASIGKEES  102 (337)
T ss_dssp             EEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-------HHHHHHHHHHHHHHHHHTTS-TT-BCCEEEEEEECTTTS
T ss_pred             EEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-------hHHHHHHHHHHHHHHHhccC-CC-hhhcccccccccccc
Confidence            5678999999999999975 44 89999752211       12234566777777776532 33 33344322       


Q ss_pred             ---CCCceEEEecCCCCchHHHHHHHc----CCCC----HHHHHHHHHHHHHHHhcc
Q 048614          107 ---RTMSLIGMRYLEPPHIILRKGLIA----GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ---~~~~~~vMEdL~~~~~~lr~~l~~----g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                         .....++||+++  . .|.+.+..    +...    -.++.+|...|+.+|...
T Consensus       103 ~~~~~~~~lv~e~~~--g-~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  156 (337)
T 3ll6_A          103 DTGQAEFLLLTELCK--G-QLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK  156 (337)
T ss_dssp             TTSSEEEEEEEECCS--E-EHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             ccCCceEEEEEEecC--C-CHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence               223689999997  2 45454433    3222    257888899999999765

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=94.72  E-value=0.081  Score=43.88  Aligned_cols=105  Identities=15%  Similarity=0.103  Sum_probs=67.5

Q ss_pred             eEecCCCceeEEEEEEeC--CC---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c-CC
Q 048614           37 IKEVGDGNLNFVYIVVGS--SG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D-RT  108 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~--~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D-~~  108 (165)
                      .+.+|.|....||++...  ++   .+.||......      -.-..++...|+.+|+.+.  -| ++.+++.+  + ..
T Consensus        94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~E~~il~~l~--hp-nIv~~~~~~~~~~~  164 (373)
T 3c1x_A           94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT------DIGEVSQFLTEGIIMKDFS--HP-NVLSLLGICLRSEG  164 (373)
T ss_dssp             EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS------CSHHHHHHHHHHTTSTTCC--CT-TBCCCCEEECCCSS
T ss_pred             CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC------CHHHHHHHHHHHHHHHhCC--CC-CcceEEEEEEcCCC
Confidence            467999999999998753  32   47778654211      1122355666777665553  23 34445543  3 34


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++  ...|++.+.+...  .    -.++.+|...|+.+|...
T Consensus       165 ~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  212 (373)
T 3c1x_A          165 SPLVVLPYMK--HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK  212 (373)
T ss_dssp             CCEEEEECCT--TCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEECCC--CCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6689999997  4578888765332  1    256788999999999753

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=94.63  E-value=0.2  Score=44.21  Aligned_cols=109  Identities=12%  Similarity=0.025  Sum_probs=72.7

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~~~~~  112 (165)
                      .++.||.|....||++... +| .+.||.-.......    .-...+...|.++|+.+..  |..+.-... .+.....+
T Consensus       189 ~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~----~~~~~~~~~E~~iL~~l~h--p~Iv~l~~~~~~~~~l~l  262 (543)
T 3c4z_A          189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK----RKGYQGAMVEKKILAKVHS--RFIVSLAYAFETKTDLCL  262 (543)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHHCCC--TTBCCEEEEEECSSEEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhh----hHHHHHHHHHHHHHHhcCC--CCEeeEEEEEeeCCEEEE
Confidence            5678999999999999986 45 78899754322111    1234678889999887642  443333333 35566789


Q ss_pred             EEecCCCCchHHHHHHHcCC----CC-H----HHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGI----KY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~----~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  +..|...+....    .+ .    .++.+|...|..+|...
T Consensus       263 VmE~~~--gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g  309 (543)
T 3c4z_A          263 VMTIMN--GGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN  309 (543)
T ss_dssp             EECCCT--TCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecc--CCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC
Confidence            999997  347777776521    22 2    35778899999999753

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=94.60  E-value=0.23  Score=40.57  Aligned_cols=107  Identities=13%  Similarity=0.052  Sum_probs=68.7

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      .++.+|.|....||++.+. +| .|+||.-.......    .-...+...|.++|+.+..  |.. .+++.  .+.....
T Consensus        58 ~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h--pni-v~~~~~~~~~~~~~  130 (348)
T 1u5q_A           58 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS----NEKWQDIIKEVRFLQKLRH--PNT-IQYRGCYLREHTAW  130 (348)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCH----HHHHHHHHHHHHHHHHCCC--TTB-CCEEEEEEETTEEE
T ss_pred             eeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccc----hHHHHHHHHHHHHHHhCCC--CCE-eeEEEEEEECCeEE
Confidence            4678999999999999875 45 79999754221100    1122466778888877742  443 33443  4566778


Q ss_pred             EEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||+.  + .+.+.+..  +...    -.++.+|...|+.+|...
T Consensus       131 lv~e~~~--g-~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  174 (348)
T 1u5q_A          131 LVMEYCL--G-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN  174 (348)
T ss_dssp             EEEECCS--E-EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCC--C-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  2 34444432  2222    257788888999999753

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=94.48  E-value=0.24  Score=44.21  Aligned_cols=112  Identities=11%  Similarity=0.007  Sum_probs=74.8

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HFDRT  108 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~~  108 (165)
                      .++ .++.||.|....||++... +| .+.||.-....-..    .-...+...|..+|+.+..  |..++-.. +.+.+
T Consensus       184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~----~~~~~~~~~E~~iL~~l~h--p~Iv~l~~~~~~~~  257 (576)
T 2acx_A          184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----RKGEAMALNEKQILEKVNS--RFVVSLAYAYETKD  257 (576)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHHCCC--TTBCCEEEEEECSS
T ss_pred             cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhh----hHHHHHHHHHHHHHHHcCC--CCEeeEEEEEeeCC
Confidence            345 5678999999999999876 45 78899764321111    1234667789999987742  44333333 33566


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCC--C-H----HHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIK--Y-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~--~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++  +..|.+.+.....  + .    .++.+|...|..+|...
T Consensus       258 ~l~lVmEy~~--gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g  306 (576)
T 2acx_A          258 ALCLVLTLMN--GGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER  306 (576)
T ss_dssp             EEEEEECCCC--SCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEEcCC--CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7789999997  3477777765331  2 2    46778889999999753

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=94.45  E-value=0.25  Score=38.94  Aligned_cols=99  Identities=16%  Similarity=0.055  Sum_probs=66.0

Q ss_pred             EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc------CCC
Q 048614           38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD------RTM  109 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------~~~  109 (165)
                      +.+|.|....||++.+. +| .++||.-..            ..+...|.+.+...... |. +++++.+-      ...
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------------~~~~~~e~~~~~~~~~h-~~-i~~~~~~~~~~~~~~~~   89 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD------------CPKARREVELHWRASQC-PH-IVRIVDVYENLYAGRKC   89 (299)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC------------SHHHHHHHHHHHHHTTS-TT-BCCEEEEEEEEETTEEE
T ss_pred             cccccCCCeEEEEEEEcCCCcEEEEEEecc------------cHHHHHHHHHHHHhccC-CC-chhHHhhhhhhcCCCce
Confidence            56999999999999885 44 799997421            24667788777444332 43 33444321      345


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++  ..+|.+.+....   ..    -.++.+|...|+.+|...
T Consensus        90 ~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  137 (299)
T 3m2w_A           90 LLIVMECLD--GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN  137 (299)
T ss_dssp             EEEEECCCC--SCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEeecC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            689999997  347777776532   22    257888888899998653

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=94.29  E-value=0.36  Score=38.31  Aligned_cols=108  Identities=14%  Similarity=0.100  Sum_probs=63.6

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      +++ .+..+|.|....||++.+. +| .++||.-.....      .-...+...|...  ....+--.++++++.  .+.
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~--~~~~~~h~niv~~~~~~~~~   93 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD------EKEQKQLLMDLDV--VMRSSDCPYIVQFYGALFRE   93 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC------HHHHHHHHHHHHH--HHSSCCCTTBCCEEEEEECS
T ss_pred             HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC------chHHHHHHHHHHH--HHHcCCCCcEeeeeeEEEeC
Confidence            344 5677999999999999986 45 799997643211      0111233333332  222222234555554  466


Q ss_pred             CCceEEEecCCCCchHHHHHHH------cCCCC----HHHHHHHHHHHHHHHhc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLI------AGIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~------~g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      +...+|||+++.   .+.+.+.      .+...    -.++.++...|..+|..
T Consensus        94 ~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  144 (327)
T 3aln_A           94 GDCWICMELMST---SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN  144 (327)
T ss_dssp             SEEEEEECCCSE---EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEeecCC---ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc
Confidence            777899999983   3444333      22222    25678888888888875

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=94.24  E-value=0.31  Score=40.00  Aligned_cols=104  Identities=17%  Similarity=0.180  Sum_probs=64.3

Q ss_pred             cc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc----
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD----  106 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D----  106 (165)
                      .+ -++.+|.|..-.||++.+. +| .++||.-..-.+           ....|.++|+.+..  | ++.+++.+-    
T Consensus         8 ~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----------~~~~E~~il~~l~h--p-nIv~l~~~~~~~~   73 (383)
T 3eb0_A            8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----------YKNRELDIMKVLDH--V-NIIKLVDYFYTTG   73 (383)
T ss_dssp             TEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----------SCCHHHHHHTTCCC--T-TBCCEEEEEEEC-
T ss_pred             eEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----------hHHHHHHHHHHcCC--C-CccchhheeeecC
Confidence            44 5688999999999999875 45 899996532211           11248888876632  3 344444321    


Q ss_pred             ------------------------------------CCCceEEEecCCCC-chHHHHHHHcCCCC-----HHHHHHHHHH
Q 048614          107 ------------------------------------RTMSLIGMRYLEPP-HIILRKGLIAGIKY-----PLLAEHMSEF  144 (165)
Q Consensus       107 ------------------------------------~~~~~~vMEdL~~~-~~~lr~~l~~g~~~-----~~~a~~iG~~  144 (165)
                                                          .....+||||++.+ ...++..+..+...     -.++.+|...
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~a  153 (383)
T 3eb0_A           74 DEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRA  153 (383)
T ss_dssp             ------------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence                                                11255899999831 12455555555543     2467788889


Q ss_pred             HHHHHhc
Q 048614          145 MAKTLFY  151 (165)
Q Consensus       145 La~~h~~  151 (165)
                      |+.+|..
T Consensus       154 L~~LH~~  160 (383)
T 3eb0_A          154 VGFIHSL  160 (383)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHHC
Confidence            9999865

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=94.20  E-value=0.36  Score=39.22  Aligned_cols=102  Identities=15%  Similarity=0.063  Sum_probs=66.9

Q ss_pred             eeEecCCCceeEEEEEEeCC------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhc------------cCC
Q 048614           36 TIKEVGDGNLNFVYIVVGSS------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQ------------LCP   96 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~------------~~p   96 (165)
                      -.+.||.|....||++.+..      + .++||.-...           ......|.++++....            +--
T Consensus        39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----------~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h  107 (364)
T 3op5_A           39 VGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSD-----------NGPLFTELKFYQRAAKPEQIQKWIRTRKLKY  107 (364)
T ss_dssp             EEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETT-----------CHHHHHHHHHHHHHCCHHHHHHHHHHTTCSC
T ss_pred             EEEEEecCCCeEEEEeeecCccccccccceEEEEeecc-----------chhHHHHHHHHHhhhhhHHHHHHHHHhhccC
Confidence            56789999999999998753      2 5888864321           1355666666665533            223


Q ss_pred             CCCceEEEEcCC------CceEEEecCCCCchHHHHHHHcC-C-CC----HHHHHHHHHHHHHHHhc
Q 048614           97 DHVPEVYHFDRT------MSLIGMRYLEPPHIILRKGLIAG-I-KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus        97 ~~vP~v~~~D~~------~~~~vMEdL~~~~~~lr~~l~~g-~-~~----~~~a~~iG~~La~~h~~  151 (165)
                      ..++++|.+-.+      ...+|||+++   ..|.+.+... . ..    -.++.+|...|+.+|..
T Consensus       108 ~~iv~~~~~~~~~~~~~~~~~lv~e~~g---~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~  171 (364)
T 3op5_A          108 LGVPKYWGSGLHDKNGKSYRFMIMDRFG---SDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH  171 (364)
T ss_dssp             CCSCCEEEEEEEEETTEEEEEEEEECEE---EEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCeEEeeeeeccCCcceEEEEEeCCC---CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            456777765433      2689999995   3666666553 2 22    25788899999999965

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=94.20  E-value=0.31  Score=39.77  Aligned_cols=110  Identities=14%  Similarity=0.021  Sum_probs=69.1

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCC--------CceEEEE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDH--------VPEVYHF  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~--------vP~v~~~  105 (165)
                      ..+.+|.|....||++.+. +| .++||.-......    -....++.+.|+++++.+..--|..        +|.=+..
T Consensus        66 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           66 LVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN----SRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT----HHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeccCCCCEEEEEEEECCCCceeEEEEEEecccc----cccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            5678999999999999976 45 7999986643211    1233457778877777776412332        2211222


Q ss_pred             cC-----------------CCceEEEecCCCCchHHHHHHHcC-C--C---C------HHHHHHHHHHHHHHHhcc
Q 048614          106 DR-----------------TMSLIGMRYLEPPHIILRKGLIAG-I--K---Y------PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~-----------------~~~~~vMEdL~~~~~~lr~~l~~g-~--~---~------~~~a~~iG~~La~~h~~t  152 (165)
                      ++                 ....+||||++   .+|.+.+... .  .   .      -.++.+|...|+.+|...
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~---~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~  214 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS---VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKG  214 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS---EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC---CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC
Confidence            21                 23689999997   3677766542 1  1   1      245689999999999753

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=94.17  E-value=0.3  Score=41.69  Aligned_cols=105  Identities=14%  Similarity=0.082  Sum_probs=67.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-CC----
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-RT----  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-~~----  108 (165)
                      -++.||.|....||++.+. +| .++||.-..-..     ......|...|..+|+.+..  |. +.+++.+- ..    
T Consensus        66 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--pn-Iv~l~~~~~~~~~~~  137 (464)
T 3ttj_A           66 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-----NQTHAKRAYRELVLMKCVNH--KN-IISLLNVFTPQKTLE  137 (464)
T ss_dssp             EEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGG-----SHHHHHHHHHHHHHHHHCCC--TT-BCCCSEEECSCCSTT
T ss_pred             EEEEeecCCCeEEEEEEECCCCCEEEEEEECcccc-----ChHHHHHHHHHHHHHHhCCC--CC-CCcEEEEEccCCccc
Confidence            3678999999999999876 45 799996542211     12334677888888887742  33 33444332 21    


Q ss_pred             ---CceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          109 ---MSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ---~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                         ...+|||+++.   .+.+.+.. ...    ..++.+|...|.-+|...
T Consensus       138 ~~~~~~lv~E~~~~---~l~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~  184 (464)
T 3ttj_A          138 EFQDVYLVMELMDA---NLCQVIQM-ELDHERMSYLLYQMLCGIKHLHSAG  184 (464)
T ss_dssp             TCCEEEEEEECCSE---EHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCeEEEEEeCCCC---CHHHHHhh-cCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               23899999983   24444433 222    247888999999999753

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=93.93  E-value=0.5  Score=42.35  Aligned_cols=106  Identities=20%  Similarity=0.085  Sum_probs=70.0

Q ss_pred             eEecCCCceeEEEEEEeCC----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCce
Q 048614           37 IKEVGDGNLNFVYIVVGSS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSL  111 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~  111 (165)
                      .+.+|.|....||++....    + .+.||.......      .-..++...|+..|+.+..  |..++-.=.+......
T Consensus       395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~H--pnIv~l~~~~~~~~~~  466 (656)
T 2j0j_A          395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS------DSVREKFLQEALTMRQFDH--PHIVKLIGVITENPVW  466 (656)
T ss_dssp             EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTC------HHHHHHHHHHHHHHHHCCC--TTBCCEEEEECSSSCE
T ss_pred             eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCC------HHHHHHHHHHHHHHHhCCC--CCCCeEEEEEecCceE
Confidence            4669999999999997642    2 588887653211      1123567778888876642  4444433334556678


Q ss_pred             EEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  ...|.+.+....  ..    -.++.+|...|+.+|...
T Consensus       467 lv~E~~~--~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g  511 (656)
T 2j0j_A          467 IIMELCT--LGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR  511 (656)
T ss_dssp             EEEECCT--TCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEcCC--CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  347777776543  22    256788999999999753

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=93.75  E-value=0.37  Score=40.15  Aligned_cols=98  Identities=17%  Similarity=0.064  Sum_probs=65.1

Q ss_pred             EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc------CCC
Q 048614           38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD------RTM  109 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------~~~  109 (165)
                      +.||.|....||++.+. +| .++||.-.    .        ..+...|.+.+...... | ++++++.+-      ...
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~----~--------~~~~~~E~~~~~~~~~h-p-~iv~l~~~~~~~~~~~~~  133 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQ----D--------CPKARREVELHWRASQC-P-HIVRIVDVYENLYAGRKC  133 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEE----C--------SHHHHHHHHHHHHHTTS-T-TBCCEEEEEEEEETTEEE
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeC----c--------chhHHHHHHHHHHhcCC-C-CcceEeEEEeecccCCcE
Confidence            57999999999999876 44 79999742    1        14666777776544322 3 344554321      345


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~  151 (165)
                      ..+||||++  +..|.+.+.+..   ..    -.++.+|...|.-+|..
T Consensus       134 ~~lv~E~~~--gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  180 (400)
T 1nxk_A          134 LLIVMECLD--GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI  180 (400)
T ss_dssp             EEEEEECCC--SEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEeCC--CCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            678999997  347777776532   22    25778888889989964

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=93.66  E-value=0.29  Score=40.45  Aligned_cols=101  Identities=17%  Similarity=0.055  Sum_probs=59.8

Q ss_pred             EecCCCceeEEEEEEeC---CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---cCCCc
Q 048614           38 KEVGDGNLNFVYIVVGS---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF---DRTMS  110 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---D~~~~  110 (165)
                      +.||.|....||++...   .+ .++||.-...         -...+...|.++|+.+.  -|..+.-.-.+   +....
T Consensus        27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~---------~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~~~   95 (405)
T 3rgf_A           27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT---------GISMSACREIALLRELK--HPNVISLQKVFLSHADRKV   95 (405)
T ss_dssp             CCCC-----EEEEEEESSSSCCCCEEEEECSSS---------SCCHHHHHHHHHHHHCC--CTTBCCCCEEEEETTTTEE
T ss_pred             cEeeecCCeEEEEEEEccCCCCeEEEEEEECCC---------CCCHHHHHHHHHHHhcC--CCCeeeEeeEEecCCCCeE
Confidence            46899999999999854   34 7999976421         11246778999998885  24433322222   34567


Q ss_pred             eEEEecCCCCchHHHHHHHcC----------CC----CHHHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLIAG----------IK----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g----------~~----~~~~a~~iG~~La~~h~~t  152 (165)
                      .+||||++.   .+.+.+...          ..    .-.++.+|...|+-+|...
T Consensus        96 ~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~  148 (405)
T 3rgf_A           96 WLLFDYAEH---DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW  148 (405)
T ss_dssp             EEEEECCSE---EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCCCC---CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            899999973   333333211          11    1257788899999999753

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=93.52  E-value=0.34  Score=41.01  Aligned_cols=102  Identities=19%  Similarity=0.141  Sum_probs=65.1

Q ss_pred             eeEecCCCceeE-EEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614           36 TIKEVGDGNLNF-VYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~-v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~  112 (165)
                      ..+.||.|.... +++....+..|.||.-.+...          ++...|..+|+..... |. +.+++.+  |.....+
T Consensus        28 ~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~----------~~~~~E~~~l~~l~~H-pn-Iv~l~~~~~~~~~~~l   95 (432)
T 3p23_A           28 PKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF----------SFADREVQLLRESDEH-PN-VIRYFCTEKDRQFQYI   95 (432)
T ss_dssp             EEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE----------EECHHHHHHHHHSCCC-TT-BCCEEEEEEETTEEEE
T ss_pred             cCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH----------HHHHHHHHHHHhccCC-CC-cCeEEEEEecCCEEEE
Confidence            345678777665 444443333899997653221          2345688888876432 33 3344433  4445579


Q ss_pred             EEecCCCCchHHHHHHHcCCC------CHHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIK------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~------~~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  . .|.+.+.....      .-.++.+|...|.-+|...
T Consensus        96 v~E~~~--g-~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  138 (432)
T 3p23_A           96 AIELCA--A-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN  138 (432)
T ss_dssp             EEECCS--E-EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTT
T ss_pred             EEECCC--C-CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCc
Confidence            999997  3 77777776542      1378999999999999753

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=93.21  E-value=0.47  Score=39.27  Aligned_cols=102  Identities=16%  Similarity=0.103  Sum_probs=61.9

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCC---
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RTM---  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~~---  109 (165)
                      .++.+|.|....||++.+..+ .+++|.....-+.           ...|.++|+.+..  | ++.+++.+-  ...   
T Consensus        44 ~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-----------~~~E~~il~~l~h--~-niv~l~~~~~~~~~~~~  109 (394)
T 4e7w_A           44 NCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-----------KNRELQIMRIVKH--P-NVVDLKAFFYSNGDKKD  109 (394)
T ss_dssp             EEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-----------CCHHHHHHHTCCC--T-TBCCEEEEEEEESSSSS
T ss_pred             EeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-----------HHHHHHHHHhCCC--C-CcceEEEEEEecCCCCC
Confidence            567889999999999998655 7888865432211           1248888877642  3 344444332  111   


Q ss_pred             ---ceEEEecCCCC-chHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          110 ---SLIGMRYLEPP-HIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 ---~~~vMEdL~~~-~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                         ..+||||++.+ ...++.....+...     ..++.+|...|+.+|..
T Consensus       110 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~  160 (394)
T 4e7w_A          110 EVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI  160 (394)
T ss_dssp             CEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence               55899999831 11222222223222     24677889999999975

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=93.00  E-value=0.13  Score=46.83  Aligned_cols=108  Identities=21%  Similarity=0.229  Sum_probs=72.6

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE----
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF----  105 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~----  105 (165)
                      +.+ -.+.+|.|....||++.+. +| .++||...+...      +-..++...|+++|+.+..  |.. .+++.+    
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~------~~~~~~~~~Ei~iL~~L~H--pnI-V~l~~v~~~~   84 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS------PKNRERWCLEIQIMKKLNH--PNV-VSAREVPDGL   84 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCC------HHHHHHHHHHHHHHHHCCB--TTB-CCEEECCTTT
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCC------HHHHHHHHHHHHHHHhCCC--CCC-Cceeeeeccc
Confidence            344 4567888988999999875 45 899998653221      2234677789999988742  433 334433    


Q ss_pred             ----cCCCceEEEecCCCCchHHHHHHHcCC----C----CHHHHHHHHHHHHHHHhc
Q 048614          106 ----DRTMSLIGMRYLEPPHIILRKGLIAGI----K----YPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       106 ----D~~~~~~vMEdL~~~~~~lr~~l~~g~----~----~~~~a~~iG~~La~~h~~  151 (165)
                          +.....+||||++  +.+|++.+....    .    .-.++.+|...|+.+|..
T Consensus        85 ~~~~~~~~~~LVmEy~~--ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~  140 (676)
T 3qa8_A           85 QKLAPNDLPLLAMEYCE--GGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN  140 (676)
T ss_dssp             CCCCTTSSCCCEEECCS--SCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccCCCeEEEEEEeCC--CCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence                2566789999997  347878776632    1    136888999999999975

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=92.80  E-value=0.65  Score=38.82  Aligned_cols=103  Identities=19%  Similarity=0.178  Sum_probs=62.1

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-c------
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-D------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D------  106 (165)
                      ..+.||.|....||++.+. +| .|+||.-....+           ....|.++|+.+..  |..+.-...| +      
T Consensus        58 ~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----------~~~~E~~il~~l~h--pniv~l~~~~~~~~~~~~  124 (420)
T 1j1b_A           58 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----------FKNRELQIMRKLDH--CNIVRLRYFFYSSGEKKD  124 (420)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-----------SCCHHHHHHHTCCC--TTBCCEEEEEEEEETTTT
T ss_pred             eeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-----------hHHHHHHHHHHcCC--CCccceeeEEeccCCCCc
Confidence            4677999999999999986 35 799997532111           11248888876642  4433332222 1      


Q ss_pred             CCCceEEEecCCCC-chHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          107 RTMSLIGMRYLEPP-HIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       107 ~~~~~~vMEdL~~~-~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      .....+||||++.+ ...++.....+...     -.++.+|...|+-+|..
T Consensus       125 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~  175 (420)
T 1j1b_A          125 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF  175 (420)
T ss_dssp             EEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            11245899999831 12233322333332     24678899999999965

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=92.69  E-value=0.3  Score=39.23  Aligned_cols=103  Identities=13%  Similarity=0.089  Sum_probs=50.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC--
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTM--  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~--  109 (165)
                      -.+.+|.|....||++.+. +| .++||.-..-     +   ....|...|...|+   .+--.++.+++.+  +...  
T Consensus        27 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~---~~~~~~~~~~~~l~---~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           27 VERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-----P---RFRNRELQIMQDLA---VLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             EC----------CEEEEETTTCCEEEEEEEECC-----T---TCCCHHHHHHHHHH---HHCCTTBCCEEEEEEEECSSC
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-----c---cccHHHHHHHHHHH---hcCCCCcccHHHhhhcccccc
Confidence            4568999999999999986 45 8999964211     1   11234444444444   3333344455433  2222  


Q ss_pred             -----ceEEEecCCCCc-hHHHHHHHcCCCC-----HHHHHHHHHHHHHHH
Q 048614          110 -----SLIGMRYLEPPH-IILRKGLIAGIKY-----PLLAEHMSEFMAKTL  149 (165)
Q Consensus       110 -----~~~vMEdL~~~~-~~lr~~l~~g~~~-----~~~a~~iG~~La~~h  149 (165)
                           ..+||||++.+. ..++..+..+...     -.++.+|...|+-+|
T Consensus        96 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH  146 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH  146 (360)
T ss_dssp             TTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             ccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence                 568999998311 1233333333332     246778888888899

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=92.24  E-value=0.16  Score=40.03  Aligned_cols=110  Identities=13%  Similarity=-0.011  Sum_probs=71.1

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCC
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRT  108 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~  108 (165)
                      .+.+ -.+.+|.|....||++...+ .++||.-......     .-..++...|...|+.+..  | ++++++  ..+..
T Consensus        32 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~-----~~~~~~~~~e~~~l~~l~h--~-~iv~~~~~~~~~~  102 (319)
T 2y4i_B           32 FEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDN-----EDQLKAFKREVMAYRQTRH--E-NVVLFMGACMSPP  102 (319)
T ss_dssp             CSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCC-----CCCCCCCCTTGGGGTTCCC--T-TBCCCCEEEECSS
T ss_pred             HHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCC-----HHHHHHHHHHHHHHhcCCC--C-CEeEEEEEEecCC
Confidence            3455 56788999999999998764 6888876533211     1122344456666655431  3 333333  34566


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ...++||+++  ...|.+.+.... ..     -.++.+|...|+.+|...
T Consensus       103 ~~~iv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  150 (319)
T 2y4i_B          103 HLAIITSLCK--GRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG  150 (319)
T ss_dssp             CEEEECBCCC--SEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceEEEeeccc--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            7899999997  457877776643 11     257888999999999763

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=91.74  E-value=0.51  Score=38.03  Aligned_cols=105  Identities=18%  Similarity=0.161  Sum_probs=60.3

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeCC----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHh------------hcc
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGSS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEH------------GQL   94 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~------------~~~   94 (165)
                      ..+ -.+.+|.|....||++.+..    + .++||.....-           .....|.++++..            ..+
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-----------~~~~~e~~~~~~~~~~~~~~e~~~~~~l  105 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQEN-----------GPLFSELKFYQRVAKKDCIKKWIERKQL  105 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC------------CHHHHHHHHHHHHCCHHHHHHHHHHHTC
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCC-----------cchHHHHHHHHHHhhhHHHHHHHhhccc
Confidence            345 56789999999999999863    3 78888765221           1222333333322            122


Q ss_pred             CCCCCceEEEEc------CCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614           95 CPDHVPEVYHFD------RTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus        95 ~p~~vP~v~~~D------~~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      --..+++++.+.      .....+|||+++   .+|.+.+......     -.++.+|...|+.+|..
T Consensus       106 ~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~---~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~  170 (345)
T 2v62_A          106 DYLGIPLFYGSGLTEFKGRSYRFMVMERLG---IDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN  170 (345)
T ss_dssp             SCCCCCCEEEEEEEESSSCEEEEEEEECEE---EEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccCcceeecccccccCCCcEEEEEEeccC---CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            234566666653      456789999995   3676666543222     25788889999999975

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=91.50  E-value=0.91  Score=36.48  Aligned_cols=103  Identities=15%  Similarity=0.024  Sum_probs=63.4

Q ss_pred             Cccee-E-ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--
Q 048614           33 DALTI-K-EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--  106 (165)
Q Consensus        33 ~~~~v-~-~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--  106 (165)
                      +++.+ . .+|.|....||++.+. +| .++||.-..-            .+...|...+.  ..+--.++++++.+-  
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------------~~~~~e~~~~~--~~~~h~~i~~~~~~~~~   93 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS------------PKARQEVDHHW--QASGGPHIVCILDVYEN   93 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS------------HHHHHHHHHHH--HHTTSTTBCCEEEEEEE
T ss_pred             ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc------------HHHHHHHHHHH--HhcCCCChHHHHHHHhh
Confidence            35665 3 5899999999999887 45 8999974211            23333333322  222223344444432  


Q ss_pred             ----CCCceEEEecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhc
Q 048614          107 ----RTMSLIGMRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       107 ----~~~~~~vMEdL~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~  151 (165)
                          .....+||||++  ...|.+.+.+..  .+     -.++.+|...|..+|..
T Consensus        94 ~~~~~~~~~lv~e~~~--gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~  147 (336)
T 3fhr_A           94 MHHGKRCLLIIMECME--GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH  147 (336)
T ss_dssp             EETTEEEEEEEEECCT--TEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccCCCceEEEEEeccC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence                223679999997  457777776642  22     25778888889999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	165
d2pula1	392	d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {	1e-35
d1nw1a_	395	d.144.1.8 (A:) Choline kinase {Caenorhabditis eleg	0.001

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} Length = 392

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

 Score =  125 bits (314), Expect = 1e-35
 Identities = 60/161 (37%), Positives = 88/161 (54%), Gaps = 8/161 (4%)

Query: 6   FRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG--SFVIKQA 63
           +  L++ S +          SK       LT +E+GDGNLN+V+ +       + +IKQA
Sbjct: 5   YETLNESSAVALAVKLGLFPSK-----STLTCQEIGDGNLNYVFHIYDQEHDRALIIKQA 59

Query: 64  LPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHII 123
           +PY + +GESWP+T +RA  E+ AL   G+  P  VP V++ D  M++  M  L     I
Sbjct: 60  VPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDLS-HLKI 118

Query: 124 LRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
            RKGLI G  YP L++H+ EF+ KTLFY+S         K+
Sbjct: 119 ARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQ 159

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} Length = 395

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 36.0 bits (82), Expect = 0.001
 Identities = 18/122 (14%), Positives = 39/122 (31%), Gaps = 15/122 (12%)

Query: 33  DALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYV--RCIGESWP---MTKERAYFEALA 87
           + L I  +  G  N +++   S     I+     V  R          +  E   F  L+
Sbjct: 43  EHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLS 102

Query: 88  LKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAK 147
             E         P++Y       L    Y+    +   +  +A +    +A+ +++    
Sbjct: 103 --ERH-----LGPKLYGIFSGGRL--EEYIPSRPLSCHEISLAHM-STKIAKRVAKVHQL 152

Query: 148 TL 149
            +
Sbjct: 153 EV 154

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	165
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	100.0
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	99.0
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	98.85
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.63
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	98.51
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	97.83
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	97.59
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	97.51
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	97.22
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	97.2
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	97.18
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	97.18
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	97.12
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	97.11
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	97.08
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	97.07
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	97.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	96.96
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	96.95
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	96.94
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	96.9
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	96.83
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	96.83
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	96.81
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	96.8
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	96.78
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	96.77
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	96.75
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	96.72
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	96.72
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	96.66
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	96.65
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	96.64
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	96.58
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	96.51
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	96.51
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	96.5
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	96.42
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	96.37
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	96.35
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	96.27
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	96.19
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	96.18
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	96.1
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	96.1
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	96.08
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	96.05
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	95.93
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	95.87
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	95.84
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	95.83
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	95.82
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	95.71
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	95.67
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	95.65
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	95.6
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	95.33
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	95.19
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	95.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	94.91
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	94.79
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	94.79
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	94.73
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	94.69
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	94.44
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	94.04
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	93.97
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	93.74
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	92.17

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=100.00  E-value=2.3e-34  Score=244.75  Aligned_cols=154  Identities=38%  Similarity=0.629  Sum_probs=138.3

Q ss_pred             CCccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCC--eEEEeecCccccccCCCCCCChHHH
Q 048614            4 TEFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG--SFVIKQALPYVRCIGESWPMTKERA   81 (165)
Q Consensus         4 ~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~   81 (165)
                      +.|++||++.+.++....+.++     +.+.++++++||||+|+||||++.+|  ++|||||+||+|+.|++|+++.+|+
T Consensus         3 ~~~e~Lt~~~~~~la~~lg~~~-----~~~~l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~   77 (392)
T d2pula1           3 PLYETLNESSAVALAVKLGLFP-----SKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRA   77 (392)
T ss_dssp             CCCCCCCHHHHHHHHHHTTC----------CCEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHH
T ss_pred             CCCccCCHHHHHHHHHHcCCCC-----CCCCeeEEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHH
Confidence            5799999999999999888764     56788999999999999999998754  9999999999999988999999999


Q ss_pred             HHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCchh
Q 048614           82 YFEALALKEHGQLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTE  161 (165)
Q Consensus        82 ~~E~~~L~~~~~~~p~~vP~v~~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~~  161 (165)
                      ++|+++|+.+++.+|..||++|+||++++++|||||+ ++..|+..+.++...+.+++++|++||++|+.++++.+++..
T Consensus        78 ~~E~~~L~~~~~~~p~~vP~v~~~d~~~~~lvmE~L~-~~~~~~~~l~~~~~~~~~a~~lg~~La~~h~~~~~~~~~~~~  156 (392)
T d2pula1          78 RIESSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDLS-HLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKV  156 (392)
T ss_dssp             HHHHHHHHHHHTTCGGGSCCEEEEETTTTEEEECCCT-TSEEHHHHHHHTCCCTTHHHHHHHHHHHHHHHTSTTTSCHHH
T ss_pred             HHHHHHHHHhhhhCCCCcceEEEEcCCCCEEEEeccC-CcccchhhhcccchhHHHHHHHHHHHHHHHHHhccccccchh
Confidence            9999999999999999999999999999999999998 699999999999999999999999999999999999999887


Q ss_pred             hh
Q 048614          162 HK  163 (165)
Q Consensus       162 ~k  163 (165)
                      ++
T Consensus       157 ~~  158 (392)
T d2pula1         157 KK  158 (392)
T ss_dssp             HH
T ss_pred             hc
Confidence            75

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.00  E-value=1.1e-09  Score=84.62  Aligned_cols=109  Identities=17%  Similarity=0.077  Sum_probs=81.8

Q ss_pred             cceeEecCCCce-eEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCc
Q 048614           34 ALTIKEVGDGNL-NFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RTMS  110 (165)
Q Consensus        34 ~~~v~~l~~Gn~-N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~~~  110 (165)
                      .+.+...++|.+ |-||||+..++++|||...+..+       .+..+...|+.+|+.+++.+|  ||+++.++  +...
T Consensus        15 ~~~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~~-------~~~~~~~~E~~~l~~l~~~vp--vP~vl~~~~~~~~~   85 (263)
T d1j7la_          15 KYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYK-------GTTYDVEREKDMMLWLEGKLP--VPKVLHFERHDGWS   85 (263)
T ss_dssp             TSEEEECSCCCSSSEEEEEECSSCEEEEEEECGGGT-------TSTTCHHHHHHHHHHHTTTSC--CCCEEEEEEETTEE
T ss_pred             ceEEEEcCCCCCCCcEEEEEeCCCeEEEEEcCCCcc-------cchhhHHHHHHHHHHHhccCC--CCcEEEEEecCCce
Confidence            456666666665 58999998777999997764432       334467789999998877544  89999874  4556


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                      .+|||+++  +..+............++.++|.+|+++|..+.
T Consensus        86 ~lv~~~l~--G~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~  126 (263)
T d1j7la_          86 NLLMSEAD--GVLCSEEYEDEQSPEKIIELYAECIRLFHSIDI  126 (263)
T ss_dssp             EEEEECCS--SEEHHHHTTTCSCHHHHHHHHHHHHHHHHTSCC
T ss_pred             EEEEEecc--cccccccccccccHHHHHHHHHHHHHHHhccCc
Confidence            89999998  466766666655557899999999999998654

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.85  E-value=2.8e-09  Score=88.37  Aligned_cols=113  Identities=13%  Similarity=0.065  Sum_probs=84.0

Q ss_pred             CCCcceeEecCCCceeEEEEEEeCCCeEEEeecCcc--ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC
Q 048614           31 KFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPY--VRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT  108 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~--~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~  108 (165)
                      +.+++++++++||..|.+|+|+..+++.++|...+.  +|+.|... .-.+| ..|.++++.+++.  +.+|++|++|+ 
T Consensus        41 ~~~~l~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~-~~idr-~~E~~i~~~ls~~--gl~Pkll~~~~-  115 (395)
T d1nw1a_          41 PLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-TESHL-VAESVIFTLLSER--HLGPKLYGIFS-  115 (395)
T ss_dssp             CGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-CHHHH-HHHHHHHHHHHHT--TSSSCEEEEET-
T ss_pred             CccceEEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcc-hhhHH-HHHHHHHHHHHhC--CCCCeEEEEcC-
Confidence            457899999999999999999988776565655544  37765322 22344 5799999999884  56999999996 


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd  154 (165)
                       +.+|||++.  +..+..   ..-..|.+...++..||++|.....
T Consensus       116 -~g~I~efi~--g~~l~~---~d~~~~~~~~~iA~~La~lH~~~~~  155 (395)
T d1nw1a_         116 -GGRLEEYIP--SRPLSC---HEISLAHMSTKIAKRVAKVHQLEVP  155 (395)
T ss_dssp             -TEEEECCCC--EEECCT---TGGGSHHHHHHHHHHHHHHTTCCCS
T ss_pred             -CceEEEEec--cccCCh---hhccchhhhHHHHHHHHHHhhcccc
Confidence             589999997  334322   1123578999999999999986544

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.63  E-value=9e-08  Score=73.20  Aligned_cols=103  Identities=11%  Similarity=-0.016  Sum_probs=76.4

Q ss_pred             cceeEecCCCcee-EEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC
Q 048614           34 ALTIKEVGDGNLN-FVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTM  109 (165)
Q Consensus        34 ~~~v~~l~~Gn~N-~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~  109 (165)
                      ...++++++|-+| -||||++.+| ++|||...+.-          ..+...|+++|+.++.. +..||+++.+  |+..
T Consensus        12 g~~~~~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~----------~~~l~~E~~~l~~L~~~-gvpvP~v~~~~~~~~~   80 (255)
T d1nd4a_          12 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA----------LNELQDEAARLSWLATT-GVPCAAVLDVVTEAGR   80 (255)
T ss_dssp             TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT----------TSCHHHHHHHHHHHHTT-TCCBCCEEEEEECSSC
T ss_pred             CCceEEcCCcccCCeEEEEEeCCCCEEEEEeCCccC----------HhHHHHHHHHHHHHHhc-CCCCCceeeecccccc
Confidence            4577888988875 6899999877 79999876432          13578899999988774 4559999986  5556


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ..++||+++ + ..+..   .....+..++++|.+|+++|...
T Consensus        81 ~~~v~~~i~-G-~~~~~---~~~~~~~~~~~l~~~la~LH~~~  118 (255)
T d1nd4a_          81 DWLLLGEVP-G-QDLLS---SHLAPAEKVSIMADAMRRLHTLD  118 (255)
T ss_dssp             EEEEEECCS-S-EETTT---SCCCHHHHHHHHHHHHHHHTTSC
T ss_pred             eEEEEEeee-c-ccccc---ccccHHHHHHHHHHHHHHHccCC
Confidence            689999997 2 33322   12223578899999999999754

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=98.51  E-value=6.2e-07  Score=72.13  Aligned_cols=127  Identities=12%  Similarity=0.065  Sum_probs=89.5

Q ss_pred             CccccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHH
Q 048614            5 EFRPLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYF   83 (165)
Q Consensus         5 ~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~   83 (165)
                      .|..||++.|.+-|.+.|+.+        +..+.++ +|.-|.||+|++.+| .+|+|.-+|--+        +.+-...
T Consensus         4 ~f~~L~pd~i~~al~~~g~~~--------~~~~~~L-~s~EN~vy~v~~~dg~~~VlK~~rp~~~--------s~~~i~~   66 (325)
T d1zyla1           4 TFQTLHPDTIMDALFEHGIRV--------DSGLTPL-NSYENRVYQFQDEDRRRFVVKFYRPERW--------TADQILE   66 (325)
T ss_dssp             CCCCCCHHHHHHHHHHTTCCC--------CSCCEEE-CCSSSEEEEECCTTCCCEEEEEECTTTS--------CHHHHHH
T ss_pred             CccccCHHHHHHHHHHcCCCC--------CcCcccc-ccccceeEEEEcCCCCEEEEEEeCCCCC--------CHHHHHH
Confidence            789999999999999877542        1234555 477799999999888 799998775322        2355677


Q ss_pred             HHHHHHHhhcc-CCCCCceEEEEcC-------CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 048614           84 EALALKEHGQL-CPDHVPEVYHFDR-------TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus        84 E~~~L~~~~~~-~p~~vP~v~~~D~-------~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      |.++|..+.+. +|...|  +..+.       .....++++++ +. .+      ....+..++++|+.||++|..+.++
T Consensus        67 E~~~l~~L~~~gipv~~p--~~~~g~~~~~~~~~~~~l~~~~~-G~-~~------~~~~~~~~~~lG~~LA~lH~~~~~~  136 (325)
T d1zyla1          67 EHQFALQLVNDEVPVAAP--VAFNGQTLLNHQGFYFAVFPSVG-GR-QF------EADNIDQMEAVGRYLGRMHQTGRKQ  136 (325)
T ss_dssp             HHHHHHHHHHTTCSBCCC--CCBTTBSCEEETTEEEEEEECCC-CE-EC------CSSCHHHHHHHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHhcCCCCCCc--eecCCCeeeeeeeEEEEEEeecC-Cc-CC------CCCCHHHHHHHHHHHHHHHhhcccC
Confidence            88899888764 343333  22232       34667888887 32 22      2245788999999999999988776


Q ss_pred             ccC
Q 048614          156 YRT  158 (165)
Q Consensus       156 ~l~  158 (165)
                      ..+
T Consensus       137 ~~~  139 (325)
T d1zyla1         137 LFI  139 (325)
T ss_dssp             CCS
T ss_pred             Ccc
Confidence            443

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.83  E-value=2.2e-05  Score=61.81  Aligned_cols=127  Identities=8%  Similarity=0.029  Sum_probs=82.8

Q ss_pred             ccCHhhHHHHHHhCCCcccccCCCCCcceeEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHH
Q 048614            8 PLDDKSLLEYIKATPSLSSKIGNKFDALTIKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALA   87 (165)
Q Consensus         8 ~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~   87 (165)
                      .||.+++..+|++-++        ++-.+++.+++|..|..|+|++++|+.|+|.-.+.         .+.+...+|.++
T Consensus         2 ~ls~~el~~~l~~Y~l--------g~~~~~~~i~~G~~N~ny~v~t~~g~yVLri~~~~---------~~~~~l~~~~~~   64 (316)
T d2ppqa1           2 DITEDELRNFLTQYDV--------GSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKR---------VEKNDLPFFLGL   64 (316)
T ss_dssp             CCCHHHHHHHHTTBCC--------CCEEEEEEECC---EEEEEEEESSCCEEEEEECC------------CCHHHHHHHH
T ss_pred             CCCHHHHHHHHHhCCC--------CCceEeecCCCCcccCeEEEEECCCcEEEEEcCCC---------CCHHHHHHHHHH
Confidence            5899999999975321        23458999999999999999999889999974422         123566778888


Q ss_pred             HHHhhcc-CCCCCceEEEEcCCC--------ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccC
Q 048614           88 LKEHGQL-CPDHVPEVYHFDRTM--------SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT  158 (165)
Q Consensus        88 L~~~~~~-~p~~vP~v~~~D~~~--------~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~  158 (165)
                      |..+.+. +|..+|  ...-...        ...++..+.. ..       .+......+..+|.++|+.|..+.++..+
T Consensus        65 l~~L~~~g~pvp~p--i~~~~g~~~~~~~~~~~~~~~~~~g-~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  134 (316)
T d2ppqa1          65 MQHLAAKGLSCPLP--LPRKDGELLGELSGRPAALISFLEG-MW-------LRKPEAKHCREVGKALAAMHLASEGFEIK  134 (316)
T ss_dssp             HHHHHHTTCCCCCB--CCBTTCCSCEEETTEEEEEEECCCC-BC-------CSSCCHHHHHHHHHHHHHHHHHTTTCCCC
T ss_pred             HHhhhhcccccccc--ceecCCCcceeeecccceeeeeccc-cc-------ccccchhHHHHHHHHHHhhhhhhhhcccc
Confidence            8888764 333333  2222222        3334444442 11       13355788999999999999999998776


Q ss_pred             chh
Q 048614          159 TTE  161 (165)
Q Consensus       159 ~~~  161 (165)
                      ...
T Consensus       135 ~~~  137 (316)
T d2ppqa1         135 RPN  137 (316)
T ss_dssp             CBC
T ss_pred             ccc
Confidence            543

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=0.0007  Score=53.30  Aligned_cols=127  Identities=17%  Similarity=0.215  Sum_probs=85.6

Q ss_pred             CHhhHHHHHHhCCCcccccCCCCCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHH
Q 048614           10 DDKSLLEYIKATPSLSSKIGNKFDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEAL   86 (165)
Q Consensus        10 ~~~~v~~Yl~~~~~~~~~~~~~~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~   86 (165)
                      |.+++..-|++.-.    .+.+...+ -++.||.|..-.||++.+. +| .+.||.-..  ..     .-..++...|++
T Consensus         1 sd~~~~~~l~~~~~----~~dp~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~--~~-----~~~~~~~~~E~~   69 (293)
T d1yhwa1           1 SDEEILEKLRSIVS----VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL--QQ-----QPKKELIINEIL   69 (293)
T ss_dssp             CHHHHHHHHHHHSB----SSCTTTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEG--GG-----CSCHHHHHHHHH
T ss_pred             ChHHHHHHHhccCC----CCCcccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEec--cc-----ChHHHHHHHHHH
Confidence            45667777775211    12223345 5788999999999999875 45 799997431  11     123578889999


Q ss_pred             HHHHhhccCCCCCceEEE--EcCCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 048614           87 ALKEHGQLCPDHVPEVYH--FDRTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        87 ~L~~~~~~~p~~vP~v~~--~D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|+.+.-  |. +.++|.  .+.+...+||||++  +..|.+.+.++...+    .++.+|...|.-+|...
T Consensus        70 il~~l~H--pn-Iv~~~~~~~~~~~~~ivmEy~~--gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  136 (293)
T d1yhwa1          70 VMRENKN--PN-IVNYLDSYLVGDELWVVMEYLA--GGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ  136 (293)
T ss_dssp             HHHHCCC--TT-BCCEEEEEEETTEEEEEEECCT--TCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHhCCC--CC-EeeEeEEEEECCEEEEEEEecC--CCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9987743  43 445553  46677789999998  346777666665543    57778888888888653

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=0.0005  Score=53.64  Aligned_cols=110  Identities=15%  Similarity=0.065  Sum_probs=76.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -.+.||.|..-.||++.+. +| .+.||.-....- .........++...|..+|+.+.-  |. +.++|.  .|+....
T Consensus        14 ~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~~~~~~E~~il~~l~H--pn-Iv~~~~~~~~~~~~~   89 (293)
T d1jksa_          14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRT-KSSRRGVSREDIEREVSILKEIQH--PN-VITLHEVYENKTDVI   89 (293)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSS-TTCSSSBCHHHHHHHHHHHHHCCC--TT-BCCEEEEEECSSEEE
T ss_pred             EeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhc-chhhhhHHHHHHHHHHHHHHhCCC--CC-CCcEEEEEEECCEEE
Confidence            4578999999999999975 45 788997432221 123345667788899999988752  43 445553  5666677


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~  151 (165)
                      +||||++  +.+|.+.+.+.... .    .++.+|...|.-+|..
T Consensus        90 iv~E~~~--gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~  132 (293)
T d1jksa_          90 LILELVA--GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL  132 (293)
T ss_dssp             EEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCC--CccccchhccccccchhHHHHHHHHHHHHHHhhhhc
Confidence            9999997  34777777664432 2    4677888888888854

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.0028  Score=48.46  Aligned_cols=104  Identities=18%  Similarity=0.159  Sum_probs=75.7

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~  112 (165)
                      -++.||.|..-.||++...++ .|.||.-.    .    -....++...|.+.|+.++-  | ++-++|.+  +++...+
T Consensus         9 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~----~----~~~~~~~~~~E~~~l~~l~H--p-nIv~~~g~~~~~~~~~l   77 (263)
T d1sm2a_           9 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIR----E----GAMSEEDFIEEAEVMMKLSH--P-KLVQLYGVCLEQAPICL   77 (263)
T ss_dssp             EEEEEECCSSCCEEEEEETTTEEEEEEECC----S----SSSCHHHHHHHHHHHHHCCC--T-TBCCEEEEECSSSSCEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCEEEEEEEC----C----CcCcHHHHHHHHHHHHhcCC--C-CcccccceeccCCceEE
Confidence            457899999999999998776 78899632    1    13455778889999887752  4 34455653  4678889


Q ss_pred             EEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  ..+|.+.+.... ..     -.++.+|+..|.-+|...
T Consensus        78 v~E~~~--~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~  121 (263)
T d1sm2a_          78 VFEFME--HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC  121 (263)
T ss_dssp             EEECCT--TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecC--CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccc
Confidence            999998  457878776643 22     248889999999998754

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.0022  Score=50.06  Aligned_cols=110  Identities=21%  Similarity=0.060  Sum_probs=74.0

Q ss_pred             CCCcceeE--ecCCCceeEEEEEEeC---CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614           31 KFDALTIK--EVGDGNLNFVYIVVGS---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH  104 (165)
Q Consensus        31 ~~~~~~v~--~l~~Gn~N~v~rv~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      ..+++.+.  +||.|..-.||++...   ++ .|.||.-.+...      .-..++...|+++|+.+.  -|. +.++|.
T Consensus         6 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~------~~~~~~~~~E~~il~~l~--Hpn-Iv~l~g   76 (285)
T d1u59a_           6 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE------KADTEEMMREAQIMHQLD--NPY-IVRLIG   76 (285)
T ss_dssp             CGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC------HHHHHHHHHHHHHHHHCC--CTT-BCCEEE
T ss_pred             cccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcC------HHHHHHHHHHHHHHHhCC--CCC-EeeEee
Confidence            44566665  5899999999998653   23 477887543221      223467888999998774  244 444554


Q ss_pred             E-cCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhc
Q 048614          105 F-DRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       105 ~-D~~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~  151 (165)
                      + ..+...+||||++  +.+|.+.+...+  ..    -.++.+|+..|+-+|..
T Consensus        77 ~~~~~~~~lvmE~~~--~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~  128 (285)
T d1u59a_          77 VCQAEALMLVMEMAG--GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK  128 (285)
T ss_dssp             EEESSSEEEEEECCT--TEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eeccCeEEEEEEeCC--CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3 4456679999998  457877765432  22    25788999999999974

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.0011  Score=51.26  Aligned_cols=108  Identities=19%  Similarity=0.107  Sum_probs=73.7

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCC
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DRT  108 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~~  108 (165)
                      .+++ -.+.||.|..-.||++...++ .|.||.-.    .    -....++...|+++|+.+.-  |..| ++|.+ ..+
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~----~----~~~~~~~~~~E~~~l~~l~H--pnIv-~~~g~~~~~   80 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----Q----GSMSPDAFLAEANLMKQLQH--QRLV-RLYAVVTQE   80 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEEC----T----TSSCHHHHHHHHHHHHHCCC--TTBC-CEEEEECSS
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEc----c----CcCCHHHHHHHHHHHHhCCC--CCEe-EEEeeeccC
Confidence            3455 456799999999999998766 68899632    1    12456788899999988742  4444 45554 445


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++ . .+|.+.+....   ..    -.++.+|+..|.-+|...
T Consensus        81 ~~~iv~Ey~~-~-g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~  129 (272)
T d1qpca_          81 PIYIITEYME-N-GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN  129 (272)
T ss_dssp             SCEEEEECCT-T-CBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEEeCC-C-CcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6679999998 3 35655443321   21    267899999999999754

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.0012  Score=50.93  Aligned_cols=108  Identities=12%  Similarity=0.065  Sum_probs=72.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -.+.||.|..-.||++.+. +| .+.||.-...... ..   -...+...|..+|+.+..  |. +.++|.  .|+....
T Consensus        10 i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~-~~---~~~~~~~~E~~il~~l~h--pn-Iv~~~~~~~~~~~~~   82 (263)
T d2j4za1          10 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KA---GVEHQLRREVEIQSHLRH--PN-ILRLYGYFHDATRVY   82 (263)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HT---TCHHHHHHHHHHHHTCCC--TT-BCCEEEEEECSSEEE
T ss_pred             EEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHcc-Ch---HHHHHHHHHHHHHHhcCC--CC-CCeEEEEEEECCEEE
Confidence            3567999999999999986 45 7889975432211 11   235677788888877642  44 444443  4555667


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CCH----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI-KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~-~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +.+|.+.+.+.. ..+    .++.+|...|+-+|...
T Consensus        83 ivmEy~~--~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~  126 (263)
T d2j4za1          83 LILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR  126 (263)
T ss_dssp             EEEECCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeecC--CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  346777776543 332    46888999999999753

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.12  E-value=0.0013  Score=47.78  Aligned_cols=106  Identities=18%  Similarity=0.119  Sum_probs=63.9

Q ss_pred             EecCCCceeEEEEEEeCCC-eEEEeecCccccccC-----CCCC------CChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 048614           38 KEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIG-----ESWP------MTKERAYFEALALKEHGQLCPDHVPEVYHF  105 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~-----~~~~------l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  105 (165)
                      ..||.|..-.||++.+.+| .++||--.+-.....     .++.      +.......|...|..+..   ..+|+.|.+
T Consensus         6 ~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~v~~~~~~   82 (191)
T d1zara2           6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAVPKVYAW   82 (191)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSSCCEEEE
T ss_pred             CEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccC---CCcceEEEe
Confidence            4688888889999998877 899996433211100     0000      011222345555554432   357777755


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                        ..++++||+++.  ..+++ + .......++.++...|+.+|...
T Consensus        83 --~~~~lvme~~~~--~~~~~-l-~~~~~~~i~~ql~~~l~~lH~~g  123 (191)
T d1zara2          83 --EGNAVLMELIDA--KELYR-V-RVENPDEVLDMILEEVAKFYHRG  123 (191)
T ss_dssp             --ETTEEEEECCCC--EEGGG-C-CCSCHHHHHHHHHHHHHHHHHTT
T ss_pred             --cCCEEEEEeecc--ccccc-h-hhHHHHHHHHHHHHHHHHHhhCC
Confidence              457999999983  33333 1 22233579999999999999754

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.0013  Score=51.07  Aligned_cols=110  Identities=20%  Similarity=0.083  Sum_probs=73.1

Q ss_pred             CcceeE--ecCCCceeEEEEEEeCC---C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EE
Q 048614           33 DALTIK--EVGDGNLNFVYIVVGSS---G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HF  105 (165)
Q Consensus        33 ~~~~v~--~l~~Gn~N~v~rv~~~~---g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~  105 (165)
                      ..++++  +||.|..-.||++...+   + .|.||.-.....  .   +-..++...|+++|+.+.  -|..| ++| .+
T Consensus         6 ~~~~le~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~--~---~~~~~~~~~E~~il~~l~--HpnIv-~~~g~~   77 (277)
T d1xbba_           6 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--D---PALKDELLAEANVMQQLD--NPYIV-RMIGIC   77 (277)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC----------CHHHHHHHHHHHHHHTCC--CTTBC-CEEEEE
T ss_pred             hhCeecCCCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhC--C---HHHHHHHHHHHHHHHhCC--CCCCc-eEEEEe
Confidence            344554  59999999999997532   2 577887532211  1   223467888999998774  25444 444 34


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +.+...+||||++  ..+|.+.+.+....     -.++.+|+..|.-+|...
T Consensus        78 ~~~~~~lvmE~~~--~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~  127 (277)
T d1xbba_          78 EAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN  127 (277)
T ss_dssp             ESSSEEEEEECCT--TEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCEEEEEEcCC--CCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCC
Confidence            5567789999998  45787877765532     257789999999999653

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.08  E-value=0.0011  Score=51.11  Aligned_cols=107  Identities=16%  Similarity=0.098  Sum_probs=68.7

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-CCC---
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-RTM---  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-~~~---  109 (165)
                      -.+.||.|..-.||++.+. +| .+.||.-..-...   + +-...|...|.++|+.+..  |. +.+++.+. .+.   
T Consensus        11 i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~---~-~~~~~~~~~E~~~l~~~~h--pn-iv~~~~~~~~~~~~~   83 (277)
T d1o6ya_          11 LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLAR---D-PSFYLRFRREAQNAAALNH--PA-IVAVYDTGEAETPAG   83 (277)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTT---C-HHHHHHHHHHHHHHHTCCC--TT-BCCEEEEEEEECSSS
T ss_pred             EeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhcc---C-HHHHHHHHHHHHHHHhcCC--CC-CCcccceeeeccCCC
Confidence            3567999999999999875 45 7999985422110   0 1123466778888865432  44 34444332 211   


Q ss_pred             --ceEEEecCCCCchHHHHHHHcCCC-CH----HHHHHHHHHHHHHHhc
Q 048614          110 --SLIGMRYLEPPHIILRKGLIAGIK-YP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 --~~~vMEdL~~~~~~lr~~l~~g~~-~~----~~a~~iG~~La~~h~~  151 (165)
                        ..+||||++  +..|.+.+..+.. .+    .++.+|...|.-+|..
T Consensus        84 ~~~~lvmE~~~--g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~  130 (277)
T d1o6ya_          84 PLPYIVMEYVD--GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN  130 (277)
T ss_dssp             EEEEEEEECCC--EEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ceEEEEEECCC--CCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence              459999998  4577777766543 32    5778889999999965

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.07  E-value=0.0027  Score=49.09  Aligned_cols=103  Identities=17%  Similarity=0.189  Sum_probs=68.4

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV--YHFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~~~~~  111 (165)
                      -.+.||.|..-.||++.+. +| .|.||.-..  .       ....+...|.++|+.+..  +..++.+  +..+.+...
T Consensus        11 l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~--~-------~~~~~~~~E~~i~~~l~~--~~~i~~~~~~~~~~~~~~   79 (299)
T d1ckia_          11 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECV--K-------TKHPQLHIESKIYKMMQG--GVGIPTIRWCGAEGDYNV   79 (299)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEEEES--C-------TTSCCHHHHHHHHHHSTT--STTCCCEEEEEEETTEEE
T ss_pred             EeEEEeeCCCcEEEEEEECCCCCEEEEEEEch--h-------ccCHHHHHHHHHHHHccC--CCcccEEEEEEecCCEEE
Confidence            3678999999999999875 45 788996321  1       112357789999987764  4445544  445667788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++. . ........+..+     ..++.++...|.-+|..
T Consensus        80 ivme~~~~-~-l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  122 (299)
T d1ckia_          80 MVMELLGP-S-LEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK  122 (299)
T ss_dssp             EEEECCCC-B-HHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEcCC-c-hhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence            89999983 3 222222233322     25777888888888874

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.0018  Score=50.67  Aligned_cols=108  Identities=13%  Similarity=0.042  Sum_probs=72.6

Q ss_pred             cc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR  107 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      ++ -.+.||.|..-.||++.+. +| .+.||.-... +..     .-..++...|.++|+.+.-  |.. .++|.  .|.
T Consensus         9 dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~-----~~~~~~~~~E~~il~~l~H--pnI-v~l~~~~~~~   80 (288)
T d1uu3a_           9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTRERDVMSRLDH--PFF-VKLYFTFQDD   80 (288)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-----TTCHHHHHHHHHHHHHCCS--TTB-CCEEEEEECS
T ss_pred             CCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccC-----HHHHHHHHHHHHHHHHcCC--CCe-eEEEEEEEEC
Confidence            45 4567899999999999875 45 7889964321 111     1235778889999987642  443 34443  366


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCC-CH----HHHHHHHHHHHHHHhc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIK-YP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~-~~----~~a~~iG~~La~~h~~  151 (165)
                      +...+||||++  +.+|.+.+..... ..    .++.+|...|.-+|..
T Consensus        81 ~~~~ivmEy~~--gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~  127 (288)
T d1uu3a_          81 EKLYFGLSYAK--NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK  127 (288)
T ss_dssp             SEEEEEECCCT--TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CEEEEEEEccC--CCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccc
Confidence            67789999998  3467666665433 32    4667888888888864

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=96.96  E-value=0.0012  Score=51.47  Aligned_cols=114  Identities=11%  Similarity=-0.007  Sum_probs=71.7

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCcccccc--CCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCc
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCI--GESWPMTKERAYFEALALKEHGQLCPDHVPE-VYHFDRTMS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~--~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~~~~  110 (165)
                      -.+.||.|....||++.+. +| .+.||.-.......  ..+..--.+|...|+.+|+.+... |..+.- -++.|.+..
T Consensus         7 ~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-pnIv~~~~~~~~~~~~   85 (277)
T d1phka_           7 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH-PNIIQLKDTYETNTFF   85 (277)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTC-TTBCCEEEEEECSSEE
T ss_pred             EceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEEeecccCcce
Confidence            4678999999999999875 45 67788733211000  000011124677888888887643 332221 234466677


Q ss_pred             eEEEecCCCCchHHHHHHHc-CCCCH----HHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLIA-GIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~-g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      .+||||++  +.+|.+.|.. |...+    .++.+|...|.-+|...
T Consensus        86 ~ivmE~~~--~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~  130 (277)
T d1phka_          86 FLVFDLMK--KGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN  130 (277)
T ss_dssp             EEEEECCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEcCC--CchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            89999997  3477777754 33333    46778888899999764

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.0042  Score=48.40  Aligned_cols=108  Identities=18%  Similarity=0.108  Sum_probs=72.9

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCC
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-FDRT  108 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~~  108 (165)
                      .+++ -.+.||.|..--||++.+.++ .|.||.-.    .    ...+.++...|+..|+.++.  |. +-++|. +..+
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~----~----~~~~~~~~~~E~~~l~~l~h--~n-Iv~~~g~~~~~   84 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----P----GTMSPEAFLQEAQVMKKLRH--EK-LVQLYAVVSEE   84 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECC----T----TSSCHHHHHHHHHHHHHCCC--TT-BCCEEEEECSS
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEEC----c----ccCCHHHHHHHHHHHHhccc--CC-EeEEEEEEecC
Confidence            3444 446799999999999998876 78888732    1    12456788889998887653  33 334443 3456


Q ss_pred             CceEEEecCCCCchHHHHHHHc---CCC----CHHHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIA---GIK----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~---g~~----~~~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++ .+ .+...+..   +..    .-.++.+|+..|+-+|...
T Consensus        85 ~~~lv~Ey~~-~g-~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~  133 (285)
T d1fmka3          85 PIYIVTEYMS-KG-SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN  133 (285)
T ss_dssp             SCEEEECCCT-TC-BHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEEecC-CC-chhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh
Confidence            6889999998 33 34333332   122    2368999999999999764

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=96.94  E-value=0.0019  Score=51.97  Aligned_cols=104  Identities=13%  Similarity=0.090  Sum_probs=72.3

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      -++.||.|..-.||++.+. +| .++||.-...-       ....++...|..+|+.+.-  | ++.+++.+  |.....
T Consensus        30 i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~-------~~~~~~~~~E~~il~~l~H--p-nIv~~~~~~~~~~~~~   99 (350)
T d1koaa2          30 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-------ESDKETVRKEIQTMSVLRH--P-TLVNLHDAFEDDNEMV   99 (350)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS-------HHHHHHHHHHHHHHHHTCC--T-TBCCEEEEEEETTEEE
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc-------hhhHHHHHHHHHHHHhCCC--C-CCCcEEEEEEECCEEE
Confidence            4578999999999999875 46 78899743211       1234667788888877742  3 34455544  777888


Q ss_pred             EEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~  151 (165)
                      +||||++  +..|.+.+.+.  ...    -.++.+|...|.-+|..
T Consensus       100 ivmE~~~--gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~  143 (350)
T d1koaa2         100 MIYEFMS--GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN  143 (350)
T ss_dssp             EEECCCC--SCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCC--CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            9999997  45777777542  222    24778888999998864

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.0033  Score=48.67  Aligned_cols=105  Identities=14%  Similarity=0.009  Sum_probs=71.9

Q ss_pred             eEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceEEEe
Q 048614           37 IKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DRTMSLIGMR  115 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~~~~~~vME  115 (165)
                      .+.||.|..-.||++... +.+.||.-.....     -+-..++...|+++|+.+.-  |..| ++|.| +.....+|||
T Consensus        13 ~~~lG~G~fg~Vy~~~~~-~~vAvK~~~~~~~-----~~~~~~~~~~E~~~l~~l~H--pnIv-~~~~~~~~~~~~lv~E   83 (276)
T d1uwha_          13 GQRIGSGSFGTVYKGKWH-GDVAVKMLNVTAP-----TPQQLQAFKNEVGVLRKTRH--VNIL-LFMGYSTAPQLAIVTQ   83 (276)
T ss_dssp             CSEEEECSSCEEEEEESS-SEEEEEECCCSSC-----CTTHHHHHHHHHHHHTTCCC--TTBC-CEEEEECSSSCEEEEE
T ss_pred             EEEEeeCCCcEEEEEEEC-CEEEEEEEEcccC-----CHHHHHHHHHHHHHHHhCCC--CCEe-eeeEEEeccEEEEEEe
Confidence            467999999999999865 4788887542211     12234566778888876632  4444 55655 4455689999


Q ss_pred             cCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          116 YLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |++  ..+|.+.|...+  ..    -.++.+|+..|+-+|...
T Consensus        84 y~~--~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~  124 (276)
T d1uwha_          84 WCE--GSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS  124 (276)
T ss_dssp             CCC--EEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCC--CCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            998  458888886543  22    257889999999999653

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.83  E-value=0.0056  Score=47.47  Aligned_cols=107  Identities=19%  Similarity=0.102  Sum_probs=73.6

Q ss_pred             Ccce-eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614           33 DALT-IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR  107 (165)
Q Consensus        33 ~~~~-v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      ++++ .+.||.|..-.||++... +| .|.||.-.    . .   ....++...|.++|+.+.-  |. +-++|.  .+.
T Consensus        17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~----~-~---~~~~~~~~~E~~il~~l~H--pn-Iv~~~~~~~~~   85 (287)
T d1opja_          17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----E-D---TMEVEEFLKEAAVMKEIKH--PN-LVQLLGVCTRE   85 (287)
T ss_dssp             GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECC----T-T---CSCHHHHHHHHHHHHHCCC--TT-BCCEEEEECSS
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEEC----C-c---cchHHHHHHHHHHHHhCCC--CC-EecCCccEeeC
Confidence            3443 567999999999999876 35 68899642    1 1   2456788889999987742  44 444444  455


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC--C-C----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGI--K-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~--~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      +...+||||++  ...+...|....  . .    -.++.+|+..|.-+|...
T Consensus        86 ~~~~iv~E~~~--~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~  135 (287)
T d1opja_          86 PPFYIITEFMT--YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN  135 (287)
T ss_dssp             SSCEEEEECCT--TCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeeEEEeeccc--CcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC
Confidence            67789999998  346666665432  2 2    246789999999999764

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.0012  Score=51.25  Aligned_cols=106  Identities=13%  Similarity=0.065  Sum_probs=70.4

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      -++.||.|..-.||++.+. +| .+.||.-... +.  .   -..++...|.++|+.+.-  | ++.++|.+  |.....
T Consensus         9 ~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~-~~--~---~~~~~~~~Ei~~l~~l~H--p-nIv~~~~~~~~~~~~~   79 (271)
T d1nvra_           9 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RA--V---DCPENIKKEICINKMLNH--E-NVVKFYGHRREGNIQY   79 (271)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------------CHHHHHHHHHTCCC--T-TBCCEEEEEEETTEEE
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEehh-hc--c---hHHHHHHHHHHHHHhCCC--C-CEeeEeeeeccCceeE
Confidence            3578999999999999875 45 7899974311 11  1   123577889998877642  4 34455543  556667


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +.+|.+.|.....+     -.++.+|...|.-+|...
T Consensus        80 ivmEy~~--gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~  123 (271)
T d1nvra_          80 LFLEYCS--GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG  123 (271)
T ss_dssp             EEEECCT--TEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeccC--CCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            9999997  34677776554433     257888899999999753

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.0033  Score=50.25  Aligned_cols=108  Identities=15%  Similarity=0.067  Sum_probs=73.7

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~~~~~~  112 (165)
                      -++.||.|..-.||++.+. +| .+.||.-....-..    .-..++...|..+|+.+.  -|..+.-.. +.|.+...+
T Consensus         9 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~----~~~~~~~~~E~~il~~l~--hp~Iv~l~~~~~~~~~~~i   82 (337)
T d1o6la_           9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA----KDEVAHTVTESRVLQNTR--HPFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHSCC--CTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccC----HHHHHHHHHHHHHHHhCC--CCCEEEEEeeecccccccc
Confidence            4678999999999999975 45 78889864322111    234678889999997764  244443333 345556678


Q ss_pred             EEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~  151 (165)
                      ||||++  +..|.+.+.++..++     .++.+|...|.-+|..
T Consensus        83 v~ey~~--gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~  124 (337)
T d1o6la_          83 VMEYAN--GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR  124 (337)
T ss_dssp             EEECCT--TCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ceeccC--CCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhc
Confidence            999998  347777777755443     3567778888888854

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.0054  Score=48.42  Aligned_cols=103  Identities=9%  Similarity=0.034  Sum_probs=72.2

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -.++||.|..-.||++.+. +| .+.||.-...-        .+..+...|.++|+.+.-  | ++.++|.  .|.....
T Consensus         9 i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~--------~~~~~~~~Ei~il~~l~H--p-nIv~~~~~~~~~~~~~   77 (321)
T d1tkia_           9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--------TDQVLVKKEISILNIARH--R-NILHLHESFESMEELV   77 (321)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--------HHHHHHHHHHHHHHHSCC--T-TBCCEEEEEEETTEEE
T ss_pred             EEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc--------ccHHHHHHHHHHHHhCCC--C-CCCeEEEEEEECCEEE
Confidence            3578999999999999876 45 79999753211        223456678888876642  3 4555553  4778889


Q ss_pred             EEEecCCCCchHHHHHHHcCC-C-CH----HHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI-K-YP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~-~-~~----~~a~~iG~~La~~h~~  151 (165)
                      +||||++  +.+|.+.+.+.. . ..    .++.+|...|.-+|..
T Consensus        78 lvmE~~~--gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~  121 (321)
T d1tkia_          78 MIFEFIS--GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH  121 (321)
T ss_dssp             EEECCCC--CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            9999998  347878776543 2 22    4678888999999965

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.78  E-value=0.0028  Score=49.87  Aligned_cols=106  Identities=11%  Similarity=-0.012  Sum_probs=69.4

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      -.+.||.|..-.||++.+. +| .+.||.-.....      .-...+...|.++|+.+.-  | ++.++|.  .|.....
T Consensus        13 ~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~------~~~~~~~~~Ei~il~~l~H--p-nIv~l~~~~~~~~~~~   83 (307)
T d1a06a_          13 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL------EGKEGSMENEIAVLHKIKH--P-NIVALDDIYESGGHLY   83 (307)
T ss_dssp             EEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------------CHHHHHHHTCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHh------hhHHHHHHHHHHHHHhCCC--C-CCCcEEEEEEECCEEE
Confidence            3567999999999999876 45 688887432111      0112456678888876642  4 3445554  4666678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +.+|.+.|.+...+     ..++.+|...|.-+|...
T Consensus        84 lvmE~~~--gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~  127 (307)
T d1a06a_          84 LIMQLVS--GGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG  127 (307)
T ss_dssp             EEECCCC--SCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeccC--CCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhce
Confidence            9999997  45788888765443     257888899999998653

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.0021  Score=49.68  Aligned_cols=105  Identities=13%  Similarity=0.010  Sum_probs=69.1

Q ss_pred             EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc------CCC
Q 048614           38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD------RTM  109 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------~~~  109 (165)
                      ++||.|..-.||++.+. ++ .|.||.-...--     -.-..++...|.++|+.+.   -.++.++|.+-      ...
T Consensus        15 ~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~-----~~~~~~~~~~E~~il~~l~---HpnIv~~~~~~~~~~~~~~~   86 (270)
T d1t4ha_          15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-----TKSERQRFKEEAEMLKGLQ---HPNIVRFYDSWESTVKGKKC   86 (270)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-----CHHHHHHHHHHHHHHTTCC---CTTBCCEEEEEEEESSSCEE
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-----CHHHHHHHHHHHHHHHhCC---CCCeeeEEEEEeeccccCCE
Confidence            36999999999999876 34 678886432110     0122356677888886654   23455666542      123


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+||||++  +.+|.+.+.+....     -.++.+|...|.-+|...
T Consensus        87 ~~ivmE~~~--~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  132 (270)
T d1t4ha_          87 IVLVTELMT--SGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT  132 (270)
T ss_dssp             EEEEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             EEEEEeCCC--CCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            478999998  34777777665433     246788899999999764

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.75  E-value=0.0043  Score=48.76  Aligned_cols=106  Identities=13%  Similarity=0.079  Sum_probs=71.8

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-------c
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-------D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-------D  106 (165)
                      -++.||.|..-.||++.+. +| .|.||.-.....     -....+|...|.++|+.+..  |..+ +++.+       +
T Consensus        22 i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-----~~~~~~~~~~Ei~il~~l~h--~~iv-~~~~~~~~~~~~~   93 (348)
T d2gfsa1          22 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----SIIHAKRTYRELRLLKHMKH--ENVI-GLLDVFTPARSLE   93 (348)
T ss_dssp             EEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTS-----SHHHHHHHHHHHHHHHHCCC--TTBC-CCSEEECSCSSTT
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEECchhc-----ChHHHHHHHHHHHHHHhcCC--CCee-eEEEEEeeccccc
Confidence            3578999999999999875 56 799997542211     12334678889999988742  3332 33322       4


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                      ..++.++||++.  ..+|.+.+..+....    .++.+|...|.-+|..
T Consensus        94 ~~~~~~i~~~~~--gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~  140 (348)
T d2gfsa1          94 EFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA  140 (348)
T ss_dssp             TCCCCEEEEECC--SEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCceEEEEEeec--CCchhhhcccccccHHHHHHHHHHHHHHHHHHHhC
Confidence            456688888887  347877776555432    4678888888989864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.72  E-value=0.003  Score=49.81  Aligned_cols=108  Identities=12%  Similarity=0.053  Sum_probs=70.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      .+++||.|....||++.+. +| .+.||.-.......    .-...+...|.++|+.+.  -|..| ++|.  .|+....
T Consensus        19 ~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~----~~~~~~~~~Ei~il~~l~--HpnIv-~~~~~~~~~~~~~   91 (309)
T d1u5ra_          19 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS----NEKWQDIIKEVRFLQKLR--HPNTI-QYRGCYLREHTAW   91 (309)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCH----HHHHHHHHHHHHHHTTCC--CTTBC-CEEEEEEETTEEE
T ss_pred             eeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccC----HHHHHHHHHHHHHHHHCC--CCCEe-eEEEEEEECCEEE
Confidence            5889999999999999875 45 68888643111100    112245667888887664  24444 4443  4667788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||+.  +..+...+..+...     -.++.+|...|.-+|...
T Consensus        92 iv~E~~~--~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~  135 (309)
T d1u5ra_          92 LVMEYCL--GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN  135 (309)
T ss_dssp             EEEECCS--EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecC--CCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  33554444444432     257888999999999753

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=96.72  E-value=0.0023  Score=51.45  Aligned_cols=104  Identities=18%  Similarity=0.176  Sum_probs=69.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~  111 (165)
                      -++.||.|..-.||++.+. +| .+.||.-...       -.....+...|.++|+.+.-  | ++.++|.+  |.....
T Consensus        33 i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~-------~~~~~~~~~~Ei~il~~l~H--p-nIv~~~~~~~~~~~~~  102 (352)
T d1koba_          33 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTP-------YPLDKYTVKNEISIMNQLHH--P-KLINLHDAFEDKYEMV  102 (352)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------SHHHHHHHHHHHHHHTTCCS--T-TBCCEEEEEECSSEEE
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEECCc-------chhHHHHHHHHHHHHHhCCC--C-CCCcEEEEEEECCEEE
Confidence            4578999999999999875 45 7999974311       11223566678888876532  3 34455543  556667


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CC-H----HHHHHHHHHHHHHHhc
Q 048614          112 IGMRYLEPPHIILRKGLIAGI-KY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~-~~-~----~~a~~iG~~La~~h~~  151 (165)
                      +||||++  +..|.+.+.+.. .+ +    .++.+|...|.-+|..
T Consensus       103 ivmE~~~--gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~  146 (352)
T d1koba_         103 LILEFLS--GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH  146 (352)
T ss_dssp             EEEECCC--CCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCC--CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999998  346666655432 22 2    4678889999999864

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.0018  Score=49.92  Aligned_cols=111  Identities=14%  Similarity=-0.013  Sum_probs=73.4

Q ss_pred             EecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEE
Q 048614           38 KEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~~v  113 (165)
                      +.||.|..-.||++.+. +| .+.||.-...... .........|...|..+|+.+..--|. +.++|.  .|++...+|
T Consensus        10 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~~~~~E~~il~~l~~~h~n-Iv~~~~~~~~~~~~~lv   87 (273)
T d1xwsa_          10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPNGTRVPMEVVLLKKVSSGFSG-VIRLLDWFERPDSFVLI   87 (273)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-CEEECTTCCEEEHHHHHHHHHCSSSCS-BCCEEEEEECSSEEEEE
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHcc-chhhhhHHHHHHHHHHHHHHhccCCCC-ccEEEEEEeeCCeEEEE
Confidence            67899999999999875 45 7889975422211 111123345677899999887643343 344443  566777999


Q ss_pred             EecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 048614          114 MRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~  151 (165)
                      ||++. ....+.+.+..+... .    .++.+|...|.-+|..
T Consensus        88 ~e~~~-~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~  129 (273)
T d1xwsa_          88 LERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC  129 (273)
T ss_dssp             EECCS-SEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecc-CcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99997 455666666554433 2    4677888889988865

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.65  E-value=0.0047  Score=49.74  Aligned_cols=110  Identities=11%  Similarity=-0.018  Sum_probs=72.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCc-cccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCc
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALP-YVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p-~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~  110 (165)
                      -++.||.|..-.||++.+. +| .+.||.-.. .+..     .-.......|...++.+..+--.++.++|.  .+++..
T Consensus         8 i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~-----~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           8 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-----KQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-----HTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             eeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcch-----hhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            3578899999999999876 45 788996432 1211     122345566777777776653223344443  466677


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      .+||||++  +..|.+.|.++...+     .++.+|...|.-+|...
T Consensus        83 ~ivmE~~~--gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~  127 (364)
T d1omwa3          83 SFILDLMN--GGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF  127 (364)
T ss_dssp             EEEECCCC--SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEecC--CCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            89999998  347777776655432     46678888899898753

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=96.64  E-value=0.0062  Score=47.57  Aligned_cols=106  Identities=10%  Similarity=0.121  Sum_probs=71.3

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF---  105 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---  105 (165)
                      .+++ -++.||.|..-.||++.+. +| .|.||.-.+          ....|...|.++|+.+... | ++++++.+   
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~----------~~~~~~~~Ei~il~~l~~h-p-nIv~~~~~~~~  101 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP----------VKKKKIKREIKILENLRGG-P-NIITLADIVKD  101 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS----------SCHHHHHHHHHHHHHHTTS-T-TBCCEEEEEEC
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECH----------HHHHHHHHHHHHHHhccCC-C-CCcEEEEEEEe
Confidence            3455 5688999999999999985 45 788997321          2346888899999887542 3 45566543   


Q ss_pred             -cCCCceEEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhcc
Q 048614          106 -DRTMSLIGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 -D~~~~~~vMEdL~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~t  152 (165)
                       +.....+||||++.  ..|+... +.-.   ...++.+|...|.-+|...
T Consensus       102 ~~~~~~~~v~e~~~~--~~L~~~~-~~l~e~~i~~i~~qil~aL~~LH~~g  149 (328)
T d3bqca1         102 PVSRTPALVFEHVNN--TDFKQLY-QTLTDYDIRFYMYEILKALDYCHSMG  149 (328)
T ss_dssp             TTTCSEEEEEECCCS--CBGGGTT-TSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCceeEEEeecCC--CcHHHHh-cCCCHHHHHHHHHHHHHHHHHHhhcc
Confidence             23447789999983  2343321 1111   1358889999999999754

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.58  E-value=0.0067  Score=47.81  Aligned_cols=108  Identities=16%  Similarity=0.138  Sum_probs=73.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~  111 (165)
                      -++.||.|....||++.+. +| .+.||.-.......    .-..++...|+.+|+.+.-  |.. .+++  +.|++...
T Consensus         8 i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~----~~~~~~~~~E~~il~~l~H--pnI-v~~~~~~~~~~~~~   80 (316)
T d1fota_           8 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR----LKQVEHTNDERLMLSIVTH--PFI-IRMWGTFQDAQQIF   80 (316)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHSCCB--TTB-CCEEEEEECSSEEE
T ss_pred             EEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccC----HHHHHHHHHHHHHHHhccC--cCh-hheeeeEeeCCeee
Confidence            3688999999999999975 45 78899754322111    1245788899999987643  433 3443  34567778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++ +. .+...+..+... .    .++.+|...|.-+|...
T Consensus        81 ivmE~~~-gg-~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  124 (316)
T d1fota_          81 MIMDYIE-GG-ELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD  124 (316)
T ss_dssp             EEECCCC-SC-BHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             eEeeecC-Cc-cccccccccccccccHHHHHHHHHHHhhhhhccCc
Confidence            9999998 33 566666665543 2    36678888888888754

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.0054  Score=47.07  Aligned_cols=106  Identities=13%  Similarity=0.048  Sum_probs=70.3

Q ss_pred             CCcce-eEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC
Q 048614           32 FDALT-IKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT  108 (165)
Q Consensus        32 ~~~~~-v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~  108 (165)
                      .++++ .+.||.|..-.||++...+..|.||.-.    .  .   ...++...|.++|+.+.   -.++-++|.+  +..
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~----~--~---~~~~~~~~E~~~l~~l~---HpnIv~~~g~~~~~~   73 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK----N--D---ATAQAFLAEASVMTQLR---HSNLVQLLGVIVEEK   73 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTEEEEEEECC----C--C---C--HHHHHTHHHHTTCC---CTTBCCEEEEECCC-
T ss_pred             HHHeEEeEEEecCCCeEEEEEEECCeEEEEEEEC----c--H---HHHHHHHHHHHHHHhCC---CCCEeeEEEEEEecC
Confidence            34453 4559999999999999864489999642    1  1   23467788888887663   2355566653  443


Q ss_pred             -CceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhc
Q 048614          109 -MSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       109 -~~~~vMEdL~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~  151 (165)
                       ...+||||++  ..+|.+.|.+..   ..    -.++.+|+..|+-+|..
T Consensus        74 ~~~~lv~ey~~--~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~  122 (262)
T d1byga_          74 GGLYIVTEYMA--KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN  122 (262)
T ss_dssp             -CCEEEECCCT--TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEeccC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC
Confidence             4579999998  346666664421   12    25899999999999965

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.0063  Score=47.34  Aligned_cols=104  Identities=13%  Similarity=0.082  Sum_probs=72.3

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~  112 (165)
                      ++.||.|..-.||++.+. +| .+.||.-....       .-..++...|.++|+.+.-  |. +-++|  +.|++...+
T Consensus        17 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-------~~~~~~~~~E~~il~~l~H--pn-Iv~l~~~~~~~~~~~l   86 (288)
T d2jfla1          17 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS-------EEELEDYMVEIDILASCDH--PN-IVKLLDAFYYENNLWI   86 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECSS-------SGGGGGTHHHHHHHHHCCC--TT-BCCEEEEEEETTEEEE
T ss_pred             eEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC-------HHHHHHHHHHHHHHHhCCC--CC-CCeEEEEEeeCCeEEE
Confidence            678999999999999876 45 78889743211       1234678889999987752  43 44454  346777889


Q ss_pred             EEecCCCCchHHHHHHHc-CC-CCH----HHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIA-GI-KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~-g~-~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  +..|.+.+.+ +. ..+    .++.+|...|.-+|...
T Consensus        87 vmEy~~--~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~  130 (288)
T d2jfla1          87 LIEFCA--GGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK  130 (288)
T ss_dssp             EEECCT--TEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  3467666554 33 332    57788888888898754

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.011  Score=46.63  Aligned_cols=105  Identities=12%  Similarity=0.049  Sum_probs=68.4

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-C-----
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD-R-----  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-~-----  107 (165)
                      -++.||.|..-.||++.+. +| .+.||.-...      +-.-..+|...|.++|+.+..  |..+ ++|.+- .     
T Consensus        12 ~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~------~~~~~~~~~~~Ei~il~~l~h--p~iv-~~~~~~~~~~~~~   82 (345)
T d1pmea_          12 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRH--ENII-GINDIIRAPTIEQ   82 (345)
T ss_dssp             EEEECC---CCCEEEEEETTTCSEEEEEEECCT------TCHHHHHHHHHHHHHHHHCCC--TTBC-CCCEEECCSSTTT
T ss_pred             EEEEEeeccCeEEEEEEECCCCcEEEEEEEehh------cChHHHHHHHHHHHHHHHcCC--CCCC-cEEEEEeeccccc
Confidence            6789999999999999875 55 7889974321      112234578889999988753  3322 333221 1     


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                      ..+.++||++. + .+|.+.+..+....    .++.+|...|.-+|..
T Consensus        83 ~~~~~l~~~~~-~-g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~  128 (345)
T d1pmea_          83 MKDVYLVTHLM-G-ADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA  128 (345)
T ss_dssp             CCCEEEEEECC-C-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cceEEEEEeec-C-CchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            24577888887 3 47878887766543    4778888888888865

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.011  Score=45.99  Aligned_cols=102  Identities=15%  Similarity=-0.026  Sum_probs=68.0

Q ss_pred             eEecCCCceeEEEEEEeCCCeEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC------Cc
Q 048614           37 IKEVGDGNLNFVYIVVGSSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFDRT------MS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~~------~~  110 (165)
                      .+.||.|..-.||++...+..|.||.-.    ..      ...+...|.+++....---|..++ +|.+..+      ..
T Consensus         8 ~~~iG~G~fg~Vy~~~~~g~~vAvK~~~----~~------~~~~~~~e~ei~~~~~~~HpnIv~-~~~~~~~~~~~~~~~   76 (303)
T d1vjya_           8 QESIGKGRFGEVWRGKWRGEEVAVKIFS----SR------EERSWFREAEIYQTVMLRHENILG-FIAADNKDNGTWTQL   76 (303)
T ss_dssp             EEEEECCSSSEEEEEEETTEEEEEEEEC----GG------GHHHHHHHHHHHTSTTCCCTTBCC-EEEEEEEECSSSEEE
T ss_pred             EEEEeeCCCeEEEEEEECCEEEEEEEEC----cc------chhHHHHHHHHHHHhhCCCCcCcc-eEEEEEeCCCcceEE
Confidence            3568999989999999764489999643    11      124566676666433211255555 4544332      23


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      .+||||++  +.+|++.|.+....    -.++.++...|+.+|..
T Consensus        77 ~lv~Ey~~--~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~  119 (303)
T d1vjya_          77 WLVSDYHE--HGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME  119 (303)
T ss_dssp             EEEEECCT--TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             EEEEeccc--CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            69999998  45888888776543    26888999999999964

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.012  Score=46.29  Aligned_cols=108  Identities=17%  Similarity=0.069  Sum_probs=71.7

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCc
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~  110 (165)
                      -.+.||.|..-.||++... +| .+.||.-..- ...     .-..++...|..+|...-.. |.. .++|  +.|.+..
T Consensus         6 i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~-----~~~~~~~~~e~~~l~~~~~h-p~I-v~~~~~~~~~~~~   78 (320)
T d1xjda_           6 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM-----DDDVECTMVEKRVLSLAWEH-PFL-THMFCTFQTKENL   78 (320)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH-----TTCHHHHHHHHHHHHHHTTC-TTB-CCEEEEEECSSEE
T ss_pred             EeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccC-----hHHHHHHHHHHHHHHHhCCC-CcE-EEEEEEEccCCce
Confidence            3678999999999999986 45 7889975321 111     13456778888776543222 433 3333  3466677


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          111 LIGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      .+||||++  +..|.+.+..+..++     .++.+|...|.-+|...
T Consensus        79 yivmEy~~--~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~  123 (320)
T d1xjda_          79 FFVMEYLN--GGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG  123 (320)
T ss_dssp             EEEEECCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEeecC--CCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            89999998  457877776654432     46778888888888753

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=96.35  E-value=0.014  Score=45.03  Aligned_cols=103  Identities=18%  Similarity=0.207  Sum_probs=67.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHFD--RTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~~~~~  111 (165)
                      -.+.||.|....||++.+. +| .+.||-...  +       ...++.+.|.+.|+.+...  .++|.++.+-  .....
T Consensus         9 i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~--~-------~~~~~~~~e~~~~~~l~~~--~~i~~~~~~~~~~~~~~   77 (293)
T d1csna_           9 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPR--R-------SDAPQLRDEYRTYKLLAGC--TGIPNVYYFGQEGLHNV   77 (293)
T ss_dssp             EEEEEEECSSCEEEEEEETTTTEEEEEEEEEC--C-------TTSCCHHHHHHHHHHTTTC--TTCCCEEEEEEETTEEE
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEcc--c-------cCcHHHHHHHHHHHHhcCC--CCCCEEEEEeecCCccE
Confidence            3578999999999999976 45 788994321  1       1223567788888877652  3566666554  45568


Q ss_pred             EEEecCCCCchHHHHHHHc-CCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIA-GIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~-g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||++++   .|.+.+.. +..+ .    .++.++...|..+|...
T Consensus        78 ~vme~~~~---~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~g  121 (293)
T d1csna_          78 LVIDLLGP---SLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS  121 (293)
T ss_dssp             EEEECCCC---BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EEEEecCC---CHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCC
Confidence            99999973   34444433 3332 2    47777788888888653

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.016  Score=44.53  Aligned_cols=109  Identities=13%  Similarity=0.027  Sum_probs=67.9

Q ss_pred             eEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 048614           37 IKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~~~~~~  112 (165)
                      ++.||.|..-.||++.+. +| .+.||.-...-..  ..-.--..+...|..+|+.+..  |. +.++|  +.+.+...+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~--~~~~~~~~~~~~Ei~il~~l~h--pn-Iv~~~~~~~~~~~~~i   77 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRS--EAKDGINRTALREIKLLQELSH--PN-IIGLLDAFGHKSNISL   77 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC--------------CTHHHHHHHHHHHCCC--TT-BCCEEEEECCTTCCEE
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhh--hhhHHHHHHHHHHHHHHHhCCC--CC-EeEEEeeeccCCceee
Confidence            567898988899999976 45 7999975322111  0011123577889999987752  33 33333  345566789


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  +..+......+...     ..++.+|...|.-+|...
T Consensus        78 vmE~~~--~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~  120 (299)
T d1ua2a_          78 VFDFME--TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW  120 (299)
T ss_dssp             EEECCS--EEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhhhc--chHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccc
Confidence            999997  33554444433322     367889999999999763

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.19  E-value=0.0068  Score=47.61  Aligned_cols=107  Identities=20%  Similarity=0.157  Sum_probs=72.5

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      ++. -++.||.|..-.||++.+. +| .+.||.-....      -+...++...|..+|+.+.-  |. +.++|.  .|+
T Consensus         6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~------~~~~~~~~~~Ei~il~~l~H--pn-Iv~l~~~~~~~   76 (322)
T d1s9ja_           6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI------KPAIRNQIIRELQVLHECNS--PY-IVGFYGAFYSD   76 (322)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC------CTTHHHHHHHHGGGGGGCCC--TT-BCCEEEEEECS
T ss_pred             cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh------CHHHHHHHHHHHHHHHhCCC--CC-CCcEEEEEEEC
Confidence            344 5678999999999999975 45 78888643211      12234567778888876642  43 444443  466


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCC-CH----HHHHHHHHHHHHHHh
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIK-YP----LLAEHMSEFMAKTLF  150 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~-~~----~~a~~iG~~La~~h~  150 (165)
                      ....+||||++  +.+|.+.+.+... ..    .++.+|...|.-+|.
T Consensus        77 ~~~~iVmEy~~--gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~  122 (322)
T d1s9ja_          77 GEISICMEHMD--GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE  122 (322)
T ss_dssp             SEEEEEEECCT--TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEEcCC--CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            77889999997  4578777765433 22    466788888888885

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=96.18  E-value=0.023  Score=43.22  Aligned_cols=107  Identities=13%  Similarity=0.050  Sum_probs=72.0

Q ss_pred             eeEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceEE
Q 048614           36 TIKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPE-VYHFDRTMSLIG  113 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~~~~~~v  113 (165)
                      .+++||.|..-.||++.+.+| .+.||.-..-..     -.-...|...|..+|+.+..  |..+.- -.+.+.....++
T Consensus         6 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~-----~~~~~~~~~~E~~il~~l~h--pnIv~~~~~~~~~~~~~i~   78 (286)
T d1ob3a_           6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE-----DEGIPSTTIREISILKELKH--SNIVKLYDVIHTKKRLVLV   78 (286)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG-----GGCCCHHHHHHHHGGGGCCC--TTBCCEEEEEECSSCEEEE
T ss_pred             eccEEecCCCcEEEEEEeCCCCEEEEEEEehhhc-----ChHHHHHHHHHHHHHHhCCC--CcEEeeeeecccCCceeEE
Confidence            478899999999999998877 899997431111     11234788889999887742  433322 234566777788


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ||+++  ...+..........     ..++.+|...|.-+|..
T Consensus        79 ~e~~~--~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~  119 (286)
T d1ob3a_          79 FEHLD--QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR  119 (286)
T ss_dssp             EECCS--EEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeeh--hhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccC
Confidence            88887  44555554444332     25788889999999975

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.10  E-value=0.026  Score=44.24  Aligned_cols=105  Identities=19%  Similarity=0.150  Sum_probs=63.5

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cC-----
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-DR-----  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~-----  107 (165)
                      .++.||.|..-.||++.+. +| .+.||.-..-..     -....++...|..+|+.+..  |..| ++|.+ ..     
T Consensus        22 ~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-----~~~~~~~~~~Ei~il~~l~h--pniv-~l~~~~~~~~~~~   93 (346)
T d1cm8a_          22 DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-----SELFAKRAYRELRLLKHMRH--ENVI-GLLDVFTPDETLD   93 (346)
T ss_dssp             EEEEC------CEEEEEETTTCCEEEEEECSSTTS-----SHHHHHHHHHHHHHHHHCCB--TTBC-CCSEEECSCSSTT
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhc-----ChHHHHHHHHHHHHHHhcCC--CCee-EEEEEeccCcccc
Confidence            5788999999999999875 45 789998542111     11234678889999988742  4333 33332 21     


Q ss_pred             --CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 048614          108 --TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 --~~~~~vMEdL~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                        ....+|||+++.   .+......+....    .++.+|...|.-+|..
T Consensus        94 ~~~~~~lv~e~~~~---~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~  140 (346)
T d1cm8a_          94 DFTDFYLVMPFMGT---DLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA  140 (346)
T ss_dssp             TCCCCEEEEECCSE---EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccceEEEEEecccc---cHHHHHHhccccHHHHHHHHHHHHHHHHHHHhC
Confidence              235899999973   3444444455433    4778888888889865

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.10  E-value=0.015  Score=46.33  Aligned_cols=111  Identities=19%  Similarity=0.143  Sum_probs=73.2

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcC
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HFDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~  107 (165)
                      +++ -++.||.|..-.||++.+. +| .+.||.-... ...     .-..++...|..+|+.+.  .|..+.-.. +.+.
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~-----~~~~~~~~~E~~il~~l~--hpnIv~~~~~~~~~  113 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-----LKQIEHTLNEKRILQAVN--FPFLVKLEFSFKDN  113 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-----TTCHHHHHHHHHHHTTCC--CTTBCCEEEEEECS
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccC-----HHHHHHHHHHHHHHHHcC--CCcEeecccccccc
Confidence            345 5689999999999999875 45 7889974321 111     134578888999887663  244443332 3455


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ....+|||++. +. .+...+.+...+ .    .++.+|...|.-+|...
T Consensus       114 ~~~~~v~e~~~-~g-~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~  161 (350)
T d1rdqe_         114 SNLYMVMEYVA-GG-EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD  161 (350)
T ss_dssp             SEEEEEEECCT-TC-BHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccccccccc-cc-chhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            56679999998 34 555666554333 2    46778888888888653

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.032  Score=42.16  Aligned_cols=107  Identities=9%  Similarity=0.003  Sum_probs=73.0

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCC-ceEEEEcCCCceE
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHV-PEVYHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~v-P~v~~~D~~~~~~  112 (165)
                      .++.||.|..-.||++.+. +| -|.||.-.    . ...-.-...|...|..+|+.+..  |..+ -.-++.+++...+
T Consensus         6 ~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~----~-~~~~~~~~~~~~~E~~il~~l~h--~niv~~~~~~~~~~~~~i   78 (292)
T d1unla_           6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVR----L-DDDDEGVPSSALREICLLKELKH--KNIVRLHDVLHSDKKLTL   78 (292)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEE----S-SCSSTTHHHHHHHHHHHHTTCCC--TTBCCEEEEEECSSEEEE
T ss_pred             eeeEEecCcCeEEEEEEECCCCcEEEEEEEe----h-hhCChHHHHHHHHHHHHHHhcCc--CCEEeeccccccccceeE
Confidence            4788999999999999986 44 68899742    1 11122345788889988876643  3322 2234567777888


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +||++.  +..+...+..+...     -.++.++...|+-+|..
T Consensus        79 v~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~  120 (292)
T d1unla_          79 VFEFCD--QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR  120 (292)
T ss_dssp             EEECCS--EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             Eeeecc--ccccccccccccccchhHHHHHHHHHHHHHHHhhcC
Confidence            999987  45666666665543     25778888889888875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.032  Score=43.42  Aligned_cols=108  Identities=14%  Similarity=0.054  Sum_probs=68.4

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-CC-----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-SG-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-  104 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-  104 (165)
                      +++ .++.||.|..-.||++... +|     .|+||.-.+..      -.-..++...|.++|+.+.-  |..| ++|. 
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~E~~~l~~l~H--pnIv-~l~g~   79 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT------SPKANKEILDEAYVMASVDN--PHVC-RLLGI   79 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----------CTHHHHHHHHHHHHHCCC--TTBC-CEEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc------CHHHHHHHHHHHHHHHhCCC--CCEe-eEEEE
Confidence            345 6779999999999999764 33     36666543211      12235678889999988742  5444 4443 


Q ss_pred             EcCCCceEEEecCCCCchHHHHHHHc-CCCCH-----HHHHHHHHHHHHHHhc
Q 048614          105 FDRTMSLIGMRYLEPPHIILRKGLIA-GIKYP-----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       105 ~D~~~~~~vMEdL~~~~~~lr~~l~~-g~~~~-----~~a~~iG~~La~~h~~  151 (165)
                      +-.++..++||++. .+ .|.+.+.. +...+     .++.+|+..|+-+|..
T Consensus        80 ~~~~~~~~v~e~~~-~~-~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~  130 (317)
T d1xkka_          80 CLTSTVQLITQLMP-FG-CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR  130 (317)
T ss_dssp             EESSSEEEEEECCT-TC-BHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EecCCeeEEEEecc-CC-cccccccccccCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            34456678889887 34 44444444 33322     4788999999999975

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.93  E-value=0.026  Score=43.79  Aligned_cols=109  Identities=15%  Similarity=0.014  Sum_probs=70.1

Q ss_pred             Ccce-eEecCCCceeEEEEEEeC-CC----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-
Q 048614           33 DALT-IKEVGDGNLNFVYIVVGS-SG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-  105 (165)
Q Consensus        33 ~~~~-v~~l~~Gn~N~v~rv~~~-~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-  105 (165)
                      +.++ .+.||.|..-.||++... +|    -+.||.-....      ..-..++...|+++|+.+.  -|. +-++|.+ 
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~E~~~l~~l~--Hpn-Iv~l~g~~   96 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY------TEKQRRDFLSEASIMGQFD--HPN-VIHLEGVV   96 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC------CHHHHHHHHHHHHHHTTCC--CTT-BCCEEEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc------CHHHHHHHHHHHHHHHhCC--CCC-CccEEEEE
Confidence            4454 356999999999999864 22    36677654221      1112346677888887663  143 3445554 


Q ss_pred             -cCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          106 -DRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 -D~~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                       +.+...+||||++  ...|.+.+....  ..    -.++.+|+..|.-+|...
T Consensus        97 ~~~~~~~iv~Ey~~--~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~  148 (299)
T d1jpaa_          97 TKSTPVMIITEFME--NGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN  148 (299)
T ss_dssp             CSSSSCEEEEECCT--TEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeCCEEEEEEEecC--CCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence             5677899999998  347777666532  22    257889999999999753

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.031  Score=44.12  Aligned_cols=103  Identities=18%  Similarity=0.172  Sum_probs=69.6

Q ss_pred             Cccee-E-ecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 048614           33 DALTI-K-EVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--D  106 (165)
Q Consensus        33 ~~~~v-~-~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      +++.+ . .||.|..-.||++.+. +| .+.||.-    +.        ..+...|.++|...... | ++.++|.+  |
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i----~~--------~~~~~~E~~~~~~~~~h-p-nIv~l~~~~~~   76 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML----QD--------CPKARREVELHWRASQC-P-HIVRIVDVYEN   76 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEE----EC--------SHHHHHHHHHHHHHTTS-T-TBCCEEEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEE----CC--------cHHHHHHHHHHHHhcCC-C-CCCeEEEEEee
Confidence            35665 3 4899999999999875 45 7889963    21        25677888876544332 3 45556543  2


Q ss_pred             ----CCCceEEEecCCCCchHHHHHHHc-C-CCC-----HHHHHHHHHHHHHHHhc
Q 048614          107 ----RTMSLIGMRYLEPPHIILRKGLIA-G-IKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       107 ----~~~~~~vMEdL~~~~~~lr~~l~~-g-~~~-----~~~a~~iG~~La~~h~~  151 (165)
                          .....+||||++  +.+|.+.|.+ | ..+     -.++.+|...|+-+|..
T Consensus        77 ~~~~~~~~~ivmEy~~--gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~  130 (335)
T d2ozaa1          77 LYAGRKCLLIVMECLD--GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI  130 (335)
T ss_dssp             EETTEEEEEEEEECCC--SEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccCCCEEEEEEECCC--CCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc
Confidence                234589999997  4578787765 2 233     25778888899999864

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.84  E-value=0.033  Score=42.60  Aligned_cols=114  Identities=10%  Similarity=0.041  Sum_probs=69.4

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC-C-C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS-S-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF---  105 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~-~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---  105 (165)
                      +.. -++.||.|....||++.+. + + -|.||.-.....  ..   ....+...|..+|+.+...--.++.++|.+   
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~--~~---~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~   81 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG--EE---GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV   81 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBC--TT---SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEE
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhc--cc---hHHHHHHHHHHHHHHHhhcCCCCcceeeeeecc
Confidence            445 5688999999999999874 3 4 467897543221  11   122345678888888876543344555533   


Q ss_pred             ----cCCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 048614          106 ----DRTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 ----D~~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                          +.....++||+++. ..........+...     ..++.+|...|.-+|...
T Consensus        82 ~~~~~~~~~~~~~e~~~~-~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~  136 (305)
T d1blxa_          82 SRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR  136 (305)
T ss_dssp             EECSSEEEEEEEEECCSC-BHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccCceEEEEEEeccC-CchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                12346899999983 32211222222222     247888889999998754

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.83  E-value=0.035  Score=43.41  Aligned_cols=110  Identities=14%  Similarity=0.004  Sum_probs=69.9

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeCC--C-----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGSS--G-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH  104 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~~--g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      +++ -.+.||.|..-.||++....  +     .|.||.-.....      .-...+...|..+|+.+... | ++-++|.
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~H-p-nIv~l~~  108 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD------SSEREALMSELKMMTQLGSH-E-NIVNLLG  108 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------------CHHHHHHHHHHHHHCCC-T-TBCCEEE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC------HHHHHHHHHHHHHHHHhcCC-C-cEeEEEE
Confidence            444 34678999999999998631  1     366665443221      12335677788888766432 3 3445554


Q ss_pred             --EcCCCceEEEecCCCCchHHHHHHHcCC------------------------CC----HHHHHHHHHHHHHHHhcc
Q 048614          105 --FDRTMSLIGMRYLEPPHIILRKGLIAGI------------------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 --~D~~~~~~vMEdL~~~~~~lr~~l~~g~------------------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                        .|++...+||||++  +.+|.+.|....                        ..    -.++.+|+..|+-+|...
T Consensus       109 ~~~~~~~~~lv~Ey~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~  184 (325)
T d1rjba_         109 ACTLSGPIYLIFEYCC--YGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS  184 (325)
T ss_dssp             EECSSSSCEEEEECCT--TCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeeCCeEEEEEEcCC--CCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              36677789999998  457777776532                        11    147889999999999754

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.82  E-value=0.0078  Score=46.26  Aligned_cols=108  Identities=17%  Similarity=0.072  Sum_probs=65.8

Q ss_pred             cc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRT  108 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~  108 (165)
                      ++ -++.||.|..-.||++.+. +| .+.||.-..... .    .....+...|.++|+.+.   -.++.++|.  +|+.
T Consensus         5 dy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~----~~~~~~~~~E~~il~~l~---HpnIv~~~~~~~~~~   76 (269)
T d2java1           5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-T----EAEKQMLVSEVNLLRELK---HPNIVRYYDRIIDRT   76 (269)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTS-C----HHHHHHHHHHHHHTTSCC---CTTBCCEEEEEEC--
T ss_pred             hCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhC-C----HHHHHHHHHHHHHHHHCC---CCCEeeEEEEEEeCC
Confidence            44 4678899999999999875 45 788996432110 0    112345556666665543   234555553  4443


Q ss_pred             C--ceEEEecCCCCchHHHHHHHc----CC-CC----HHHHHHHHHHHHHHHhc
Q 048614          109 M--SLIGMRYLEPPHIILRKGLIA----GI-KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       109 ~--~~~vMEdL~~~~~~lr~~l~~----g~-~~----~~~a~~iG~~La~~h~~  151 (165)
                      +  ..+||||++  ..+|.+.+.+    +. ..    -.++.+|...|.-+|..
T Consensus        77 ~~~~~ivmEy~~--~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~  128 (269)
T d2java1          77 NTTLYIVMEYCE--GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR  128 (269)
T ss_dssp             --CEEEEEECCT--TEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEEecCC--CCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            3  357999997  3467666543    22 22    25778888899989864

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.71  E-value=0.025  Score=43.01  Aligned_cols=109  Identities=19%  Similarity=0.116  Sum_probs=69.1

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeCC----C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-E
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGSS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-F  105 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~  105 (165)
                      +++ -.+.||.|..-.||++....    + .+.||.-.....      .-..++...|+++|+.+.-  |..+ ++|. +
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~------~~~~~~~~~E~~~l~~l~H--pnIv-~l~~~~   77 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS------DSVREKFLQEALTMRQFDH--PHIV-KLIGVI   77 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS------HHHHHHHHHHHHHHHTCCC--TTBC-CEEEEE
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccC------HHHHHHHHHHHHHHHhCCC--CCEe-eEEEEE
Confidence            344 45789999999999997642    2 466776532211      1223566778888877642  4444 4555 4


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ......+||||++  ...+.+.+....  ..    -.++.+|...|.-+|...
T Consensus        78 ~~~~~~iv~E~~~--~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~  128 (273)
T d1mp8a_          78 TENPVWIIMELCT--LGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR  128 (273)
T ss_dssp             CSSSCEEEEECCT--TEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ecCeEEEEEEecc--CCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccC
Confidence            4566789999998  345655554432  22    256788899999999753

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.67  E-value=0.063  Score=41.22  Aligned_cols=112  Identities=12%  Similarity=0.043  Sum_probs=69.5

Q ss_pred             CCCcc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--
Q 048614           31 KFDAL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--  105 (165)
Q Consensus        31 ~~~~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--  105 (165)
                      +.+.. -+..||.|....||++.+. +| .+.||+-...-.   .  .-...+...|..+|+.+..  |..+.-.-.+  
T Consensus         8 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~---~--~~~~~~~~~E~~il~~l~h--~nii~~~~~~~~   80 (318)
T d3blha1           8 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE---K--EGFPITALREIKILQLLKH--ENVVNLIEICRT   80 (318)
T ss_dssp             BGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----C---T--TSSCHHHHHHHHHHHHCCC--TTBCCEEEEEEC
T ss_pred             ccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc---c--hHHHHHHHHHHHHHHHhcC--CCccceEeeeec
Confidence            34555 5689999999999999975 55 799997432111   1  2234678889999988753  4433332222  


Q ss_pred             -------cCCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 048614          106 -------DRTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       106 -------D~~~~~~vMEdL~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                             +.....++||+++  ...+......+..+     ..++.+|...|.-+|..
T Consensus        81 ~~~~~~~~~~~~~iv~e~~~--~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~  136 (318)
T d3blha1          81 KASPYNRCKGSIYLVFDFCE--HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN  136 (318)
T ss_dssp             ----------CEEEEEECCC--EEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccccccCceEEEEEeccC--CCccchhhhcccccccHHHHHHHHHHHHHHHHhccC
Confidence                   2234568999998  33444333333332     24678888888888864

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.049  Score=41.25  Aligned_cols=103  Identities=18%  Similarity=0.129  Sum_probs=69.1

Q ss_pred             eEecCCCceeEEEEEEeCCC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 048614           37 IKEVGDGNLNFVYIVVGSSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~~~~~v  113 (165)
                      ++.||.|-.-.||++...++ .|.||.-    +. +   ....+-...|...|+.+.  -|..++ +|.+  ++....+|
T Consensus         9 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l----~~-~---~~~~~~~~~Ev~~~~~l~--HpnIv~-~~g~~~~~~~~~iv   77 (258)
T d1k2pa_           9 LKELGTGQFGVVKYGKWRGQYDVAIKMI----KE-G---SMSEDEFIEEAKVMMNLS--HEKLVQ-LYGVCTKQRPIFII   77 (258)
T ss_dssp             CCCCCEETTEEEEEEEETTTEEEEEEEE----ES-S---SSCHHHHHHHHHHHHTCC--CTTBCC-EEEEECCSSSEEEE
T ss_pred             eEEEecCCCeEEEEEEECCCCEEEEEEE----Cc-C---cCCHHHHHHHHHHHHhcC--CCceee-EEEEEeeCCceEEE
Confidence            46789888889999998766 7888963    22 1   234456677888887764  254444 4443  44566789


Q ss_pred             EecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 048614          114 MRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdL~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++ .. .+.+.+....  ..    -.++.+|+..|+-+|...
T Consensus        78 ~Ey~~-~g-~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~  120 (258)
T d1k2pa_          78 TEYMA-NG-CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ  120 (258)
T ss_dssp             EECCT-TE-EHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEccC-CC-cHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcC
Confidence            99998 33 4555554432  21    258889999999999753

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.60  E-value=0.053  Score=41.58  Aligned_cols=107  Identities=13%  Similarity=0.104  Sum_probs=67.2

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~~~~~  111 (165)
                      .++.||.|....||++.+. +| .++||.-..-..  .   .-..++...|.++|+.+.-  | ++.++|.  .|.....
T Consensus         6 ~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~--~---~~~~~~~~~Ei~il~~l~H--p-~Iv~~~~~~~~~~~~~   77 (298)
T d1gz8a_           6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--T---EGVPSTAIREISLLKELNH--P-NIVKLLDVIHTENKLY   77 (298)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEC------------CCHHHHHHHHHHTTCCC--T-TBCCEEEEEEETTEEE
T ss_pred             eccEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--C---hHHHHHHHHHHHHHHhCCC--C-cEEEecccccccccee
Confidence            4788999999999999875 45 788997532111  1   1123677889999876642  3 3444443  3556678


Q ss_pred             EEEecCCCCchHHHHHHHc-CC-CC----HHHHHHHHHHHHHHHhcc
Q 048614          112 IGMRYLEPPHIILRKGLIA-GI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdL~~~~~~lr~~l~~-g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++ .. .+...... +. ..    ..++.+|...|.-+|...
T Consensus        78 iv~e~~~-~~-~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~  122 (298)
T d1gz8a_          78 LVFEFLH-QD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR  122 (298)
T ss_dssp             EEEECCS-EE-HHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeecC-Cc-hhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence            9999997 32 22211122 22 22    357888899999998764

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.33  E-value=0.056  Score=41.80  Aligned_cols=106  Identities=16%  Similarity=-0.003  Sum_probs=69.3

Q ss_pred             eEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 048614           37 IKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      .+.||.|..-.||++...      .+ .+.||+-.+-.      ......+...|+.+|+.+... |..| ++|.+  +.
T Consensus        28 ~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~------~~~~~~~~~~E~~~~~~l~~H-pnIv-~~~g~~~~~   99 (311)
T d1t46a_          28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA------HLTEREALMSELKVLSYLGNH-MNIV-NLLGACTIG   99 (311)
T ss_dssp             EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC------CHHHHHHHHHHHHHHHHHCCC-TTBC-CEEEEECSS
T ss_pred             eeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc------CHHHHHHHHHHHHHHHhccCC-CCEE-EEEEEEeeC
Confidence            467999999999999742      23 68888764321      223345566788888776432 3333 45554  34


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC-------------------C----CHHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGI-------------------K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~-------------------~----~~~~a~~iG~~La~~h~~t  152 (165)
                      ....+||||++  ..++...|....                   .    ...++.+|...|+-+|...
T Consensus       100 ~~~~lvmE~~~--~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~  165 (311)
T d1t46a_         100 GPTLVITEYCC--YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN  165 (311)
T ss_dssp             SSCEEEEECCT--TEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEEcCC--CCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            55789999998  345666654432                   1    1257899999999999764

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.19  E-value=0.049  Score=41.53  Aligned_cols=112  Identities=17%  Similarity=0.068  Sum_probs=62.7

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC--CC---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-E
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS--SG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH-F  105 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~--~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~  105 (165)
                      +++ -++.||.|-.-.||++...  ++   .|.||.-.+....    -.-..++...|.+.|+.+.  -|..+ ++|. +
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~----~~~~~~~~~~Ei~~l~~l~--H~nIv-~~~g~~   80 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS----QPEAMDDFIREVNAMHSLD--HRNLI-RLYGVV   80 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC------------CHHHHHHHHHHHHHHHCC--CTTBC-CEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcC----CHHHHHHHHHHHHHHHhCC--CCCEE-EEEEEE
Confidence            345 4578999999999999743  33   4667764322211    0122356778888887774  24444 4453 4


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcC-CCC----HHHHHHHHHHHHHHHhcc
Q 048614          106 DRTMSLIGMRYLEPPHIILRKGLIAG-IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~~~~~~vMEdL~~~~~~lr~~l~~g-~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ......+||||++ .+.......... ...    -.++.+|+..|.-+|...
T Consensus        81 ~~~~~~lv~e~~~-~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~  131 (273)
T d1u46a_          81 LTPPMKMVTELAP-LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR  131 (273)
T ss_dssp             CSSSCEEEEECCT-TCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eecchheeeeeec-CcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCC
Confidence            4456789999998 343333222222 222    367889999999999754

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.00  E-value=0.053  Score=42.68  Aligned_cols=106  Identities=14%  Similarity=0.087  Sum_probs=65.9

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-------c
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF-------D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-------D  106 (165)
                      .+..||.|..-.||++.+. +| .+.||.-..-..  .   .-...|...|..+|+.++  .|..+.-.-.|       +
T Consensus        21 i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~--~---~~~~~~~~~Ei~il~~l~--hpnIv~~~~~f~~~~~~~~   93 (355)
T d2b1pa1          21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ--N---QTHAKRAYRELVLMKCVN--HKNIISLLNVFTPQKTLEE   93 (355)
T ss_dssp             EEEECSCC--CEEEEEEETTTTEEEEEEEEESTTS--S---HHHHHHHHHHHHHHHHCC--CTTBCCCSEEECSCCSTTT
T ss_pred             EEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhc--C---HHHHHHHHHHHHHHHhcC--CCCeeEEEEEEeccccccc
Confidence            4689999999999999876 45 899998432110  0   112357788888988874  24433322222       2


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 048614          107 RTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~~~~~~vMEdL~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+||||+.  +..++ .+. +...    ..++.+|...|.-+|...
T Consensus        94 ~~~~~iv~Ey~~--~~l~~-~~~-~~~~~~~i~~~~~qil~gl~~LH~~g  139 (355)
T d2b1pa1          94 FQDVYLVMELMD--ANLCQ-VIQ-MELDHERMSYLLYQMLCGIKHLHSAG  139 (355)
T ss_dssp             CCEEEEEEECCS--EEHHH-HHT-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceeEEEEeccc--hHHHH-hhh-cCCCHHHHHHHHHHHHHHHHHhhhcc
Confidence            345579999997  33443 332 3322    257788888888888754

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.91  E-value=0.035  Score=43.00  Aligned_cols=112  Identities=17%  Similarity=0.129  Sum_probs=70.7

Q ss_pred             CCCccee-EecCCCceeEEEEEEeC-CC---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--
Q 048614           31 KFDALTI-KEVGDGNLNFVYIVVGS-SG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY--  103 (165)
Q Consensus        31 ~~~~~~v-~~l~~Gn~N~v~rv~~~-~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--  103 (165)
                      +.+++++ +.||-|..-.||++... +|   .|.||+-....-      .-..++...|.++|+.+... |.. -++|  
T Consensus         8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~~H-pnI-v~~~~~   79 (309)
T d1fvra_           8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS------KDDHRDFAGELEVLCKLGHH-PNI-INLLGA   79 (309)
T ss_dssp             CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------------CHHHHHHHHHTTCCCC-TTB-CCEEEE
T ss_pred             CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccC------hHHHHHHHHHHHHHHhccCC-CCE-eeEEEE
Confidence            3455544 67999999999999765 33   356776432221      12345778899988776432 333 3333  


Q ss_pred             EEcCCCceEEEecCCCCchHHHHHHHcC----------------CCC-----HHHHHHHHHHHHHHHhcc
Q 048614          104 HFDRTMSLIGMRYLEPPHIILRKGLIAG----------------IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       104 ~~D~~~~~~vMEdL~~~~~~lr~~l~~g----------------~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +.+.....+||||++  +.+|.+.|...                ...     ..++.+|+..|.-+|...
T Consensus        80 ~~~~~~~~iV~ey~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~  147 (309)
T d1fvra_          80 CEHRGYLYLAIEYAP--HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ  147 (309)
T ss_dssp             EEETTEEEEEECCCT--TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EecCCeeEEEEEecC--CCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC
Confidence            345566789999998  45777777543                111     357889999999888753

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.79  E-value=0.11  Score=39.66  Aligned_cols=111  Identities=13%  Similarity=-0.035  Sum_probs=64.9

Q ss_pred             Ccc-eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 048614           33 DAL-TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH  104 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      +++ -.+.||.|..-.||++...      ++ .|.||+-..-..      .-...+...|.+.|...... |..+.....
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~------~~~~~~~~~e~~~l~~~~~h-~~iv~~~~~   85 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT------HSEHRALMSELKILIHIGHH-LNVVNLLGA   85 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----C------HHHHHHHHHHHHHHHHHCCC-TTBCCEEEE
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccC------cHHHHHHHHHHHHHHhhcCC-CeEEEeeee
Confidence            445 4578999999999999853      22 477887542111      11224455566666554332 333333333


Q ss_pred             EcC--CCceEEEecCCCCchHHHHHHHcCC-----------------C----CHHHHHHHHHHHHHHHhcc
Q 048614          105 FDR--TMSLIGMRYLEPPHIILRKGLIAGI-----------------K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~D~--~~~~~vMEdL~~~~~~lr~~l~~g~-----------------~----~~~~a~~iG~~La~~h~~t  152 (165)
                      +..  ....+||||++  +.+|.+.|....                 .    .-.++.+|...|.-+|...
T Consensus        86 ~~~~~~~~~iv~E~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~  154 (299)
T d1ywna1          86 CTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK  154 (299)
T ss_dssp             ECSTTSCCEEEEECCT--TCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eccCCCeEEEEEEecC--CCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            332  23578999997  457767664321                 1    1257889999999999654

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.79  E-value=0.11  Score=39.46  Aligned_cols=106  Identities=16%  Similarity=0.059  Sum_probs=66.6

Q ss_pred             eeEecCCCceeEEEEEEeCC--C----eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 048614           36 TIKEVGDGNLNFVYIVVGSS--G----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYH--FDR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~~--g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      ..+.||.|..-.||++....  +    .|.||.-..-..      .-...+...|+++|+.+.-  |. +-++|.  .+.
T Consensus        11 ~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~~E~~il~~l~H--~n-Iv~~~g~~~~~   81 (283)
T d1mqba_          11 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT------EKQRVDFLGEAGIMGQFSH--HN-IIRLEGVISKY   81 (283)
T ss_dssp             EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC------HHHHHHHHHHHHHHHTCCC--TT-BCCEEEEECSS
T ss_pred             eeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccC------hHHHHHHHHHHHHHHhcCC--CC-EeeeeEEEecC
Confidence            34558999999999987542  1    477887532111      1122355678888877642  44 344554  366


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 048614          108 TMSLIGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ~~~~~vMEdL~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +...+|||++. . ..+.+.+.... ..     -.++.+|+..|.-+|...
T Consensus        82 ~~~~~v~e~~~-~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~  130 (283)
T d1mqba_          82 KPMMIITEYME-N-GALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN  130 (283)
T ss_dssp             SSEEEEEECCT-T-EEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEEecc-c-CcchhhhhcccccccHHHHHHHHHHHHHhhhhccccc
Confidence            78889999998 3 35555555432 22     258889999999999643

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.73  E-value=0.12  Score=39.64  Aligned_cols=110  Identities=14%  Similarity=0.032  Sum_probs=72.6

Q ss_pred             CCcc-eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE
Q 048614           32 FDAL-TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY  103 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~  103 (165)
                      .+++ -+++||.|..-.||++...      ++ .|.||.-.....      .-..++...|.++|+.+..  |..++-.-
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~------~~~~~~~~~E~~il~~l~h--~niv~~~~   83 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS------ADMQADFQREAALMAEFDN--PNIVKLLG   83 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC------HHHHHHHHHHHHHHHTCCC--TTBCCEEE
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcC------hHHHHHHHHHHHHHHhcCC--CCccccee
Confidence            3445 6788999999999999753      23 578887432111      1123577889888877642  44333332


Q ss_pred             -EEcCCCceEEEecCCCCchHHHHHHHcCCC-----------------------------CHHHHHHHHHHHHHHHhc
Q 048614          104 -HFDRTMSLIGMRYLEPPHIILRKGLIAGIK-----------------------------YPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       104 -~~D~~~~~~vMEdL~~~~~~lr~~l~~g~~-----------------------------~~~~a~~iG~~La~~h~~  151 (165)
                       +.+.....++||+++  +.+|.+.|.....                             .-.++.+|+..|+-+|..
T Consensus        84 ~~~~~~~~~~v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~  159 (301)
T d1lufa_          84 VCAVGKPMCLLFEYMA--YGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER  159 (301)
T ss_dssp             EECSSSSCEEEEECCT--TCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eeccCCceEEEEEecC--CCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC
Confidence             345678899999998  4577777754221                             125788999999999975

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.69  E-value=0.045  Score=42.83  Aligned_cols=110  Identities=17%  Similarity=0.141  Sum_probs=73.8

Q ss_pred             eeEecCCCceeEEEEEEeC----CC-eEEEeecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCC
Q 048614           36 TIKEVGDGNLNFVYIVVGS----SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVY-HFDRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~----~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~~  108 (165)
                      -++.||.|....||++...    +| .+.||.-... ...   + .-..++...|+++|+.+..- |..+.-.. +.|+.
T Consensus        28 ~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~---~-~~~~~~~~~E~~il~~l~h~-pnIv~~~~~~~~~~  102 (322)
T d1vzoa_          28 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ---K-AKTTEHTRTERQVLEHIRQS-PFLVTLHYAFQTET  102 (322)
T ss_dssp             EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE---E-ESSGGGCCCHHHHHHHHHTC-TTBCCEEEEEEETT
T ss_pred             EEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhcc---c-hHHHHHHHHHHHHHHhccCC-CeEEEeeeeeccCC
Confidence            3589999999999999763    34 6889974422 211   1 12357888999999888642 44333333 34678


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 048614          109 MSLIGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdL~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      ...++||++.  ..+|.+.+..+...+     ..+.+|...|.-+|...
T Consensus       103 ~~~~v~e~~~--~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~  149 (322)
T d1vzoa_         103 KLHLILDYIN--GGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG  149 (322)
T ss_dssp             EEEEEECCCC--SCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceeeeeeccc--ccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCC
Confidence            8889999997  447777776665432     35667777777777643

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.44  E-value=0.066  Score=42.03  Aligned_cols=102  Identities=18%  Similarity=0.193  Sum_probs=63.7

Q ss_pred             eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC----
Q 048614           36 TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DR----  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~----  107 (165)
                      .++.||.|..-.||++.+. +| .|.||.-.    . ..      .....|.++|+.+..  | ++.+++.+  +.    
T Consensus        24 ~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~----~-~~------~~~~~Ei~il~~l~h--~-niv~~~~~~~~~~~~~   89 (350)
T d1q5ka_          24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----Q-DK------RFKNRELQIMRKLDH--C-NIVRLRYFFYSSGEKK   89 (350)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEE----C-CS------SSCCHHHHHHHHCCC--T-TBCCEEEEEEEC--CC
T ss_pred             eeeEEeeCcCeEEEEEEECCCCCEEEEEEEC----c-cc------hHHHHHHHHHHhcCC--C-CCCcEEEEEEecCccC
Confidence            4667999999999999986 45 78899642    1 11      112258888887642  3 34444332  11    


Q ss_pred             -CC-ceEEEecCCCC-chHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhc
Q 048614          108 -TM-SLIGMRYLEPP-HIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 -~~-~~~vMEdL~~~-~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~  151 (165)
                       .. -.+||||++.+ ...++.........+     .++.+|...|.-+|..
T Consensus        90 ~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~  141 (350)
T d1q5ka_          90 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF  141 (350)
T ss_dssp             SCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence             11 36899999831 134544444444332     4788999999999975

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.04  E-value=0.29  Score=37.24  Aligned_cols=113  Identities=15%  Similarity=-0.005  Sum_probs=64.5

Q ss_pred             CCCcce-eEecCCCceeEEEEEEeCC--------C-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc
Q 048614           31 KFDALT-IKEVGDGNLNFVYIVVGSS--------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVP  100 (165)
Q Consensus        31 ~~~~~~-v~~l~~Gn~N~v~rv~~~~--------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP  100 (165)
                      +.++++ .+.||.|..-.||++....        + .|.||.-.....      .-.......|...|...... |..|+
T Consensus        11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~~e~~~l~~~~~H-pnIv~   83 (299)
T d1fgka_          11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT------EKDLSDLISEMEMMKMIGKH-KNIIN   83 (299)
T ss_dssp             CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCC------HHHHHHHHHHHHHHHHHCCC-TTBCC
T ss_pred             cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccC------hHHHHHHHHHHHHHHHhcCC-CeEEe
Confidence            345664 4789999999999997531        1 356666543221      11234555666666655432 44444


Q ss_pred             eEE-EEcCCCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 048614          101 EVY-HFDRTMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       101 ~v~-~~D~~~~~~vMEdL~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      -.- +.|.....+||||+.  ...+.+.|....                 ..    -.++.+|...|.-+|...
T Consensus        84 ~~~~~~~~~~~~~v~e~~~--~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~  155 (299)
T d1fgka_          84 LLGACTQDGPLYVIVEYAS--KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK  155 (299)
T ss_dssp             EEEEECSSSSCEEEECCCT--TCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccccCCeEEEEEEccC--CCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC
Confidence            332 234566778999998  447777775432                 11    357888899999888753

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.97  E-value=0.12  Score=40.14  Aligned_cols=104  Identities=15%  Similarity=0.122  Sum_probs=67.3

Q ss_pred             EecCCCceeEEEEEEeCC--C---eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC-C
Q 048614           38 KEVGDGNLNFVYIVVGSS--G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEVYHF--DRT-M  109 (165)
Q Consensus        38 ~~l~~Gn~N~v~rv~~~~--g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~~-~  109 (165)
                      +.||.|-.--||++...+  +   .+.||.-....      ..-..+|...|+++|+.+.-  | ++-++|.+  +.+ .
T Consensus        33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~------~~~~~~~~~~E~~~l~~l~H--p-nIv~~~g~~~~~~~~  103 (311)
T d1r0pa_          33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT------DIGEVSQFLTEGIIMKDFSH--P-NVLSLLGICLRSEGS  103 (311)
T ss_dssp             EEEEEETTEEEEEEEECC----CEEEEEEEECCCC------CHHHHHHHHHHHHHHHTCCC--T-TBCCCCEEEEETTTE
T ss_pred             eEEeecCCeEEEEEEEECCCCEEEEEEEEEECccc------CHHHHHHHHHHHHHHHhCCC--C-CEeEEeEEEEecCCc
Confidence            368999999999998643  2   25567532111      12334778899998877642  3 34455543  443 5


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhcc
Q 048614          110 SLIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdL~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+||||++  ...+.+.+.....  .    -.++.+++..|.-+|...
T Consensus       104 ~~lv~E~~~--~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~  150 (311)
T d1r0pa_         104 PLVVLPYMK--HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK  150 (311)
T ss_dssp             EEEEEECCT--TCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEEEee--cCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccC
Confidence            689999998  3467776655432  1    258888899998888743

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.74  E-value=0.076  Score=41.01  Aligned_cols=112  Identities=20%  Similarity=0.137  Sum_probs=69.7

Q ss_pred             CCCcc-eeEecCCCceeEEEEEEeC------CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE
Q 048614           31 KFDAL-TIKEVGDGNLNFVYIVVGS------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLCPDHVPEV  102 (165)
Q Consensus        31 ~~~~~-~v~~l~~Gn~N~v~rv~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v  102 (165)
                      +.+++ -.+.||.|....||++...      .+ .|.||.-....      ..-...+...|+.+|+.++  .|..++-.
T Consensus        18 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~------~~~~~~~~~~E~~il~~l~--h~nIv~~~   89 (308)
T d1p4oa_          18 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA------SMRERIEFLNEASVMKEFN--CHHVVRLL   89 (308)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS------CHHHHHHHHHHHHHGGGCC--CTTBCCEE
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc------ChHHHHHHHHHHHHHHHcC--CCCEeeee
Confidence            34555 4566999999999998753      23 68889753211      1112345567777776664  25555544


Q ss_pred             EEE-cCCCceEEEecCCCCchHHHHHHHcCC---------------CCHHHHHHHHHHHHHHHhcc
Q 048614          103 YHF-DRTMSLIGMRYLEPPHIILRKGLIAGI---------------KYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       103 ~~~-D~~~~~~vMEdL~~~~~~lr~~l~~g~---------------~~~~~a~~iG~~La~~h~~t  152 (165)
                      -.+ +.+...+||||++. + +|...+....               ..-.++.+++..|+-+|...
T Consensus        90 ~~~~~~~~~~lv~e~~~~-g-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~  153 (308)
T d1p4oa_          90 GVVSQGQPTLVIMELMTR-G-DLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK  153 (308)
T ss_dssp             EEECSSSSCEEEEECCTT-C-BHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEecCCceeEEEeecCC-C-CHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            434 45667889999983 3 5555443211               01358889999999999763

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.17  E-value=1.5  Score=33.36  Aligned_cols=109  Identities=10%  Similarity=-0.000  Sum_probs=66.5

Q ss_pred             cc-eeEecCCCceeEEEEEEeC-CC-eEEEeecCccccccCCCCCCChHHHHHHHHHHHHhhccC--------CCCCceE
Q 048614           34 AL-TIKEVGDGNLNFVYIVVGS-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGQLC--------PDHVPEV  102 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rv~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~--------p~~vP~v  102 (165)
                      .+ -++.||.|....||++.+. +| .|.||.-..-        ....++...|..+|+.+....        -.++.++
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~--------~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~   85 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD--------KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKL   85 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--------HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCC
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc--------ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEE
Confidence            35 4899999999999999975 56 7889974311        122367778888888886421        0134444


Q ss_pred             EE----EcCCCceEEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHh
Q 048614          103 YH----FDRTMSLIGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       103 ~~----~D~~~~~~vMEdL~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~  150 (165)
                      +.    -++....++|++............... ...     ..+..+|...|..+|.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~  143 (362)
T d1q8ya_          86 LDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR  143 (362)
T ss_dssp             CEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh
Confidence            32    244556677777763222222222222 121     3577788888888886