Citrus Sinensis ID: 048664

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-----
MGRIDYIGVVFLSLFGVVGLSEAQLQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRAEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN
cccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccccEEccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHcccccccccHHHHHHHHHHcccccccHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHccccccccHHHcccccHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccccccccccc
ccHHHHHHHHHHHHHHHHcccccccEccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHcccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccEccEEcccccHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHccEEEHHHcHHHcccHHHcccccccccHHHHHHHHHHcccccccccEEEcccccccccccHHHHHHHHHcccccccHHHHHccccHHHHHHHHHHccHHHHHHHHHHHHHHHHccccEcccccEccccccccc
MGRIDYIGVVFLSLFGVVGLSEAQLQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFhdcfvrgcdasvllnstgnpernavpnqtltgatfDFIERVKRLVedacpgivscaDILTLVTRdsivatggpswkvptgrrdgrVSIRAEaqnnipaptnnFTLLQRSFANQGLDLKDLVLLSGahtigvshctsvssrlynftgvgdqdpalDSEYAANLKarkcrtpndnttllemdpgsrktfdLSYYNLLLKRRglfvsdaslttnSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRnkvktgsegeirkrcafvn
MGRIDYIGVVFLSLFGVVGLSEAQLQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNStgnpernavpnqtltgATFDFIERVKRLVEDACPGIVSCADILTLVTRdsivatggpswkvptgrrDGRVSIRAeaqnnipaptnnFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANlkarkcrtpndnttllemdpgsrkTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEkmgrnkvktgsegeirkrcafvn
MGRIDYIgvvflslfgvvglsEAQLQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRAEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN
***IDYIGVVFLSLFGVVGLSEAQLQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTG*****AVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPT******************APTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQ**********************************KTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAK**************************
***IDYIGVVFLSLFGVVGLSEAQLQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRAEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKA**********TLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN
MGRIDYIGVVFLSLFGVVGLSEAQLQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRAEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN
*GRIDYIGVVFLSLFGVVGLSEAQLQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRAEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRC****
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGRIDYIGVVFLSLFGVVGLSEAQLQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRAEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query325 2.2.26 [Sep-21-2011]
Q9LSY7329 Peroxidase 30 OS=Arabidop yes no 0.944 0.933 0.680 1e-125
O23044326 Peroxidase 3 OS=Arabidops no no 0.953 0.950 0.683 1e-125
Q9SUT2326 Peroxidase 39 OS=Arabidop no no 0.993 0.990 0.661 1e-123
P37834326 Peroxidase 1 OS=Oryza sat no no 0.926 0.923 0.565 1e-91
Q43735321 Peroxidase 27 OS=Arabidop no no 0.956 0.968 0.545 7e-88
Q9LXG3329 Peroxidase 56 OS=Arabidop no no 0.972 0.960 0.517 2e-86
Q67Z07325 Peroxidase 2 OS=Arabidops no no 0.913 0.913 0.486 2e-78
P0DI10325 Peroxidase 1 OS=Arabidops no no 0.913 0.913 0.486 2e-78
P22196330 Cationic peroxidase 2 OS= N/A no 0.96 0.945 0.453 6e-72
Q9SI16338 Peroxidase 15 OS=Arabidop no no 0.935 0.899 0.474 5e-71
>sp|Q9LSY7|PER30_ARATH Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1 Back     alignment and function desciption
 Score =  448 bits (1152), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 211/310 (68%), Positives = 252/310 (81%), Gaps = 3/310 (0%)

Query: 14  LFGVVGLSEAQLQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCD 73
           L G++  SEAQLQ+ FYAKSCP AEKI+ D++  HIHN PSLAA  +RMHFHDCFVRGCD
Sbjct: 18  LIGMLRSSEAQLQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCD 77

Query: 74  ASVLLNST-GNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIV 132
            SVL+NST GN ER+A PN TL G  F F+ER+K L+E  CP  VSCADI+ L  RD++V
Sbjct: 78  GSVLINSTSGNAERDAPPNLTLRG--FGFVERIKALLEKVCPKTVSCADIIALTARDAVV 135

Query: 133 ATGGPSWKVPTGRRDGRVSIRAEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHT 192
           ATGGPSW VPTGRRDGR+S + EA NNIP PT+NFT LQR F NQGL+LKDLVLLSGAHT
Sbjct: 136 ATGGPSWSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLNLKDLVLLSGAHT 195

Query: 193 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFD 252
           IGVSHC+S+++RLYNF+    QDP+LDS+YAANLKA KC++ NDN+T+LEMDPGS ++FD
Sbjct: 196 IGVSHCSSMNTRLYNFSTTVKQDPSLDSQYAANLKANKCKSLNDNSTILEMDPGSSRSFD 255

Query: 253 LSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTG 312
           LSYY L+LKRRGLF SD++LTTNS TL ++  L+ GS + FF  FAKS+EKMGR KVKTG
Sbjct: 256 LSYYRLVLKRRGLFQSDSALTTNSATLKVINDLVNGSEKKFFKAFAKSMEKMGRVKVKTG 315

Query: 313 SEGEIRKRCA 322
           S G IR RC+
Sbjct: 316 SAGVIRTRCS 325
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|O23044|PER3_ARATH Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=2 SV=1 Back     alignment and function description
>sp|Q9SUT2|PER39_ARATH Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1 Back     alignment and function description
>sp|P37834|PER1_ORYSJ Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2 Back     alignment and function description
>sp|Q43735|PER27_ARATH Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1 Back     alignment and function description
>sp|Q9LXG3|PER56_ARATH Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1 Back     alignment and function description
>sp|Q67Z07|PER2_ARATH Peroxidase 2 OS=Arabidopsis thaliana GN=PER2 PE=2 SV=1 Back     alignment and function description
>sp|P0DI10|PER1_ARATH Peroxidase 1 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1 Back     alignment and function description
>sp|P22196|PER2_ARAHY Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1 Back     alignment and function description
>sp|Q9SI16|PER15_ARATH Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query325
255549391324 Peroxidase 3 precursor, putative [Ricinu 0.975 0.978 0.742 1e-137
118483205325 unknown [Populus trichocarpa] 0.990 0.990 0.724 1e-137
224093204327 predicted protein [Populus trichocarpa] 0.978 0.972 0.730 1e-137
255549389327 Peroxidase 39 precursor, putative [Ricin 0.987 0.981 0.719 1e-136
118484065328 unknown [Populus trichocarpa] 0.978 0.969 0.737 1e-135
224133014321 predicted protein [Populus trichocarpa] 0.963 0.975 0.732 1e-134
225447326326 PREDICTED: peroxidase 3 [Vitis vinifera] 0.993 0.990 0.700 1e-132
449468337326 PREDICTED: peroxidase 39-like [Cucumis s 0.990 0.987 0.695 1e-132
4204761351 peroxidase precursor, partial [Glycine m 0.96 0.888 0.724 1e-131
356543738326 PREDICTED: peroxidase 39-like [Glycine m 0.96 0.957 0.718 1e-130
>gi|255549391|ref|XP_002515749.1| Peroxidase 3 precursor, putative [Ricinus communis] gi|223545186|gb|EEF46696.1| Peroxidase 3 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 239/322 (74%), Positives = 274/322 (85%), Gaps = 5/322 (1%)

Query: 7   IGVVFLSLFGVVGLSEAQLQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHD 66
            GV F +    +G +EAQLQ+GFY+KSCPRAE+IV  +VN+HIHNAPSLAA+F+RMHFHD
Sbjct: 4   FGVYFFAFLAYMGSAEAQLQMGFYSKSCPRAEQIVQGFVNQHIHNAPSLAATFIRMHFHD 63

Query: 67  CFVRGCDASVLLNST--GN-PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADIL 123
           CFVRGCDASVLLNS+  GN  E++A PN TL G  F FI+ VK L+E  CPG+VSCAD++
Sbjct: 64  CFVRGCDASVLLNSSSSGNQTEKSATPNLTLRG--FGFIDSVKSLLEAECPGVVSCADVI 121

Query: 124 TLVTRDSIVATGGPSWKVPTGRRDGRVSIRAEAQNNIPAPTNNFTLLQRSFANQGLDLKD 183
            LV RDSIVATGGPSW+VPTGRRDG VS+ +EA NNIP PT+N T LQR FAN GLDLKD
Sbjct: 122 ALVARDSIVATGGPSWRVPTGRRDGTVSMASEALNNIPPPTSNLTTLQRLFANVGLDLKD 181

Query: 184 LVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEM 243
           LVLLSGAHTIG++HC S S+RLYNFTGVGDQDPALDSEYAA LKARKC TPNDNTT++EM
Sbjct: 182 LVLLSGAHTIGIAHCPSFSNRLYNFTGVGDQDPALDSEYAAVLKARKCTTPNDNTTIVEM 241

Query: 244 DPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEK 303
           DPGSRKTFDLSYY+ LLKRRGLF SD++LTT+S TLS + QLL GSLENFFAEFA S+EK
Sbjct: 242 DPGSRKTFDLSYYSNLLKRRGLFQSDSALTTSSATLSTINQLLSGSLENFFAEFAASIEK 301

Query: 304 MGRNKVKTGSEGEIRKRCAFVN 325
           MG+  VKTGS GEIRK+CAFVN
Sbjct: 302 MGQINVKTGSAGEIRKQCAFVN 323

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|118483205|gb|ABK93506.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224093204|ref|XP_002309832.1| predicted protein [Populus trichocarpa] gi|222852735|gb|EEE90282.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255549389|ref|XP_002515748.1| Peroxidase 39 precursor, putative [Ricinus communis] gi|223545185|gb|EEF46695.1| Peroxidase 39 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|118484065|gb|ABK93918.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224133014|ref|XP_002327936.1| predicted protein [Populus trichocarpa] gi|222837345|gb|EEE75724.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225447326|ref|XP_002280274.1| PREDICTED: peroxidase 3 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449468337|ref|XP_004151878.1| PREDICTED: peroxidase 39-like [Cucumis sativus] gi|449490264|ref|XP_004158555.1| PREDICTED: peroxidase 39-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|4204761|gb|AAD11482.1| peroxidase precursor, partial [Glycine max] Back     alignment and taxonomy information
>gi|356543738|ref|XP_003540317.1| PREDICTED: peroxidase 39-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query325
TAIR|locus:2207210326 RCI3 "RARE COLD INDUCIBLE GENE 0.929 0.926 0.688 2.9e-112
TAIR|locus:2093099329 AT3G21770 [Arabidopsis thalian 0.92 0.908 0.688 5.9e-112
TAIR|locus:2128308326 AT4G11290 [Arabidopsis thalian 0.929 0.926 0.687 3.8e-110
TAIR|locus:2102087321 AT3G01190 [Arabidopsis thalian 0.907 0.919 0.562 1.2e-81
TAIR|locus:2150946329 AT5G15180 [Arabidopsis thalian 0.913 0.902 0.543 1.1e-80
TAIR|locus:2817952325 AT1G05240 [Arabidopsis thalian 0.913 0.913 0.486 6.5e-74
TAIR|locus:2207215325 AT1G05250 [Arabidopsis thalian 0.913 0.913 0.486 6.5e-74
TAIR|locus:2053129338 AT2G18150 [Arabidopsis thalian 0.907 0.872 0.481 4.4e-68
TAIR|locus:2115335331 AT4G36430 [Arabidopsis thalian 0.907 0.891 0.475 2.4e-67
TAIR|locus:2053139337 AT2G18140 [Arabidopsis thalian 0.904 0.872 0.466 1.5e-65
TAIR|locus:2207210 RCI3 "RARE COLD INDUCIBLE GENE 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
 Identities = 210/305 (68%), Positives = 252/305 (82%)

Query:    22 EAQLQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNST 81
             +AQLQ+ FYA SCP AEKIV D+V+ H+ NAPSLAA+ +RMHFHDCFVRGCD SVL+NST
Sbjct:    23 QAQLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINST 82

Query:    82 -GNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWK 140
              GN ER+A PN T+ G  F FI+ +K ++E  CPGIVSCADI+ L +RD++V TGGP+W 
Sbjct:    83 SGNAERDATPNLTVRG--FGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWS 140

Query:   141 VPTGRRDGRVSIRAEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTS 200
             VPTGRRDGR+S  AEA  NIP PT+N T LQ  FANQGLDLKDLVLLSGAHTIGVSHC+S
Sbjct:   141 VPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSS 200

Query:   201 VSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLL 260
              ++RLYNFTG G QDPALDSEYAANLK+RKC + NDN T++EMDPGSRKTFDLSYY L+L
Sbjct:   201 FTNRLYNFTGRGGQDPALDSEYAANLKSRKCPSLNDNKTIVEMDPGSRKTFDLSYYQLVL 260

Query:   261 KRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKR 320
             KRRGLF SD++LTTN  TLS + ++L GS+ +FF+EFAKS+EKMGR  VKTGS G +R++
Sbjct:   261 KRRGLFQSDSALTTNPTTLSNINRILTGSVGSFFSEFAKSMEKMGRINVKTGSAGVVRRQ 320

Query:   321 CAFVN 325
             C+  N
Sbjct:   321 CSVAN 325
GO:0004601 "peroxidase activity" evidence=IEA;ISS;IDA
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=ISS
GO:0009269 "response to desiccation" evidence=IMP
GO:0009409 "response to cold" evidence=IEP
GO:0042538 "hyperosmotic salinity response" evidence=IMP
GO:0006826 "iron ion transport" evidence=RCA
GO:0010054 "trichoblast differentiation" evidence=RCA
GO:0010106 "cellular response to iron ion starvation" evidence=RCA
GO:0010167 "response to nitrate" evidence=RCA
GO:0015706 "nitrate transport" evidence=RCA
GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA
TAIR|locus:2093099 AT3G21770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128308 AT4G11290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102087 AT3G01190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150946 AT5G15180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2817952 AT1G05240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207215 AT1G05250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053129 AT2G18150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053139 AT2G18140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LSY7PER30_ARATH1, ., 1, 1, ., 1, ., 70.68060.94460.9331yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.991
3rd Layer1.11.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_VII1054
hypothetical protein (327 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.XIV.3012.1
aspartate transaminase (EC-2.6.1.1) (403 aa)
     •  0.899
gw1.VI.2755.1
aspartate transaminase (EC-2.6.1.1) (397 aa)
     •  0.899
gw1.41.216.1
histidinol-phosphate aminotransferase (366 aa)
     •  0.899
gw1.28.655.1
annotation not avaliable (78 aa)
     •  0.899
f5h
SubName- Full=Ferulate-5-hydroxylase; Flags- Precursor; (501 aa)
     •  0.899
grail3.0013044701
aspartate transaminase (EC-2.6.1.1) (466 aa)
     •  0.899
PAL
RecName- Full=Phenylalanine ammonia-lyase; EC=4.3.1.24;; This is a key enzyme of plant metaboli [...] (715 aa)
     •  0.899
SAD
SubName- Full=Cinnamyl alcohol dehydrogenase; (362 aa)
     •  0.899
fgenesh4_pg.C_scaffold_803000002
hypothetical protein (316 aa)
     •  0.899
AMT7
aminotransferase family protein (EC-2.6.1.5) (407 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query325
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-158
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 2e-93
pfam00141180 pfam00141, peroxidase, Peroxidase 3e-62
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 3e-17
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 4e-12
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 7e-07
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 3e-06
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 5e-05
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 0.001
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  443 bits (1142), Expect = e-158
 Identities = 161/303 (53%), Positives = 206/303 (67%), Gaps = 7/303 (2%)

Query: 24  QLQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN 83
           QL +GFY+KSCP AE IV   V   +   P LAA+ LR+HFHDCFVRGCDASVLL+ST N
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTAN 60

Query: 84  P--ERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKV 141
              E++A PN +L G  FD I+ +K  +E ACPG+VSCADIL L  RD++V  GGPS++V
Sbjct: 61  NTSEKDAPPNLSLRG--FDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEV 118

Query: 142 PTGRRDGRVSIRAEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSV 201
           P GRRDGRVS  A    N+P+P  + + L   FA++GL + DLV LSGAHTIG +HC+S 
Sbjct: 119 PLGRRDGRVS-SANDVGNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSF 177

Query: 202 SSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLK 261
           S RLYNF+G GD DP LD  YAA L+ +KC    D+ TL+ +DPG+  TFD SYY  LL 
Sbjct: 178 SDRLYNFSGTGDPDPTLDPAYAAQLR-KKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLA 236

Query: 262 RRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRC 321
            RGL  SD +L ++  T ++V +    + + FF +FA ++ KMG   V TGS+GEIRK C
Sbjct: 237 GRGLLTSDQALLSDPRTRAIVNRYA-ANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNC 295

Query: 322 AFV 324
             V
Sbjct: 296 RVV 298

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 325
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.95
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.31
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.6e-108  Score=784.68  Aligned_cols=313  Identities=45%  Similarity=0.808  Sum_probs=289.3

Q ss_pred             HHHHHHHHHHhhhc-c-ccccCcCcccCCCchHHHHHHHHHHHHHHhCCCchhhhhHhhhccccccCCCceEEecCCCCC
Q 048664            7 IGVVFLSLFGVVGL-S-EAQLQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNP   84 (325)
Q Consensus         7 ~~~~~~~~~~~~~~-~-~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~a~~llRL~FHDcfv~GcDgSill~~~~~~   84 (325)
                      +-+|+++++..... + .++|+++||++|||++|+||+++|++++.+||+++|++|||+||||||+||||||||+++ ..
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~-~~   83 (324)
T PLN03030          5 IVILFFLLAMMATTLVQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS-NT   83 (324)
T ss_pred             hhHHHHHHHHHhcccchhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC-cc
Confidence            33444444443322 2 367999999999999999999999999999999999999999999999999999999864 34


Q ss_pred             ccCCCCCCCCCCcchHHHHHHHHHHHhhCCCCCcHHHHHHhhhhhhhhccCCCCccccCCCcCCCCCchhhhhcCCCCCC
Q 048664           85 ERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRAEAQNNIPAPT  164 (325)
Q Consensus        85 E~~~~~N~~L~g~~~~~Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~  164 (325)
                      ||++++|.+|+|  |++||.||+++|++||++||||||||+||||||+++|||.|+|++||||+++|.+.++. +||.|+
T Consensus        84 Ek~a~~N~~l~G--f~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~  160 (324)
T PLN03030         84 EKTALPNLLLRG--YDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFT  160 (324)
T ss_pred             cccCCCCcCcch--HHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCC
Confidence            999999999999  99999999999999999999999999999999999999999999999999999877764 899999


Q ss_pred             CCHHHHHHHHHHcCCCcccceeeecccccccccccccccccccCCCCC-CCCCCCCHHHHHHhhcccCCCCCCCCCcccC
Q 048664          165 NNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVG-DQDPALDSEYAANLKARKCRTPNDNTTLLEM  243 (325)
Q Consensus       165 ~~~~~l~~~F~~~Gl~~~dlVaLsGaHTiG~~hc~~f~~Rl~~f~~~~-~~dp~ld~~~~~~L~~~~Cp~~~~~~~~~~l  243 (325)
                      .++++|++.|+++||+.+|||+||||||||++||.+|.+|||||++++ .+||+||+.|+++||+ .||..++....+++
T Consensus       161 ~~~~~l~~~F~~~Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~-~Cp~~~~~~~~~~l  239 (324)
T PLN03030        161 DSIDVQKQKFAAKGLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQA-LCPQNGDGSRRIAL  239 (324)
T ss_pred             CCHHHHHHHHHHcCCCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhc-cCCCCCCCCccccC
Confidence            999999999999999999999999999999999999999999999875 5899999999999999 99964333346789


Q ss_pred             CCCCCcccCcHHHHHHhhcccccccccccccChhHHHHHHHHhcCCH----HHHHHHHHHHHHHhhcCCCCCCCCCcccc
Q 048664          244 DPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSL----ENFFAEFAKSVEKMGRNKVKTGSEGEIRK  319 (325)
Q Consensus       244 D~~tp~~FDn~Yy~~l~~~~glL~SD~~L~~d~~t~~~V~~y~A~d~----~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~  319 (325)
                      |+.||.+|||+||+||++++|+|+|||+|+.|++|+++|++| |.|+    ++|+++|++||+|||+|+|+||.+|||||
T Consensus       240 D~~Tp~~FDn~Yy~nll~~rGlL~SDq~L~~d~~T~~~V~~~-A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk  318 (324)
T PLN03030        240 DTGSSNRFDASFFSNLKNGRGILESDQKLWTDASTRTFVQRF-LGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRK  318 (324)
T ss_pred             CCCCCcccccHHHHHHHhcCCCcCCchHhhcCccHHHHHHHH-hcccccchhhhHHHHHHHHHHHccCCCCCCCCCceec
Confidence            999999999999999999999999999999999999999999 9874    59999999999999999999999999999


Q ss_pred             cCccCC
Q 048664          320 RCAFVN  325 (325)
Q Consensus       320 ~C~~~n  325 (325)
                      +|+++|
T Consensus       319 ~C~~vN  324 (324)
T PLN03030        319 VCSAIN  324 (324)
T ss_pred             cccccC
Confidence            999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query325
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 9e-62
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 4e-59
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 2e-58
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 5e-58
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 3e-57
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 3e-57
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 1e-56
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 2e-56
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 2e-56
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 2e-56
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 2e-56
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 6e-56
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 6e-56
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 7e-56
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 8e-56
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 2e-55
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 8e-55
1sch_A294 Peanut Peroxidase Length = 294 1e-54
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 1e-54
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 2e-05
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 4e-05
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 1e-04
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 2e-04
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 2e-04
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 2e-04
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 2e-04
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 2e-04
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 2e-04
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 2e-04
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 2e-04
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 2e-04
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 2e-04
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 9e-04
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure 
Iteration: 1

 Score =  233 bits (594), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 137/308 (44%), Positives = 184/308 (59%), Gaps = 13/308 (4%)
Query: 25  LQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN- 83
           LQ+GFY  SCP AE +V   V     N   +A   +RMHFHDCFVRGCDASVLL+ST N 
Sbjct: 2   LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61
Query: 84  -PERNAVPNQ-TLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKV 141
             E++A+PN  +L G  F+ I   K  VE ACP  VSCADIL    RDS    G  +++V
Sbjct: 62  TAEKDAIPNNPSLRG--FEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQV 119
Query: 142 PTGRRDGRVSIRAEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSV 201
           P+GRRDG VS+ +EA   IP+P  N T L  SFAN+ L   ++V LSGAH+IGV+HC+S 
Sbjct: 120 PSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSF 179
Query: 202 SSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTL----LEMDPGSRKTFDLSYYN 257
           ++RLYNF      DP L   YAA L+   C  P ++T      + +D  +    D  YY 
Sbjct: 180 TNRLYNFNSGSGIDPTLSPSYAALLR-NTC--PANSTRFTPITVSLDIITPSVLDNMYYT 236
Query: 258 LLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEI 317
            +    GL  SD +L T +  LS   +    +L  + ++FA+++ KMG+ +V TG++GEI
Sbjct: 237 GVQLTLGLLTSDQALVTEA-NLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEI 295
Query: 318 RKRCAFVN 325
           R  C+ VN
Sbjct: 296 RTNCSVVN 303
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query325
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-162
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-162
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-161
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-159
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-157
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-157
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-155
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 7e-71
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 2e-57
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 4e-56
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 1e-54
2e39_A344 Peroxidase; heme protein, coordination geometry of 7e-49
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 7e-48
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 4e-46
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 6e-11
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 7e-09
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
 Score =  452 bits (1166), Expect = e-162
 Identities = 135/306 (44%), Positives = 181/306 (59%), Gaps = 9/306 (2%)

Query: 25  LQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN- 83
           LQ+GFY  SCP AE +V   V     N   +A   +RMHFHDCFVRGCDASVLL+ST N 
Sbjct: 2   LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61

Query: 84  -PERNAVPNQ-TLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKV 141
             E++A+PN  +L G  F+ I   K  VE ACP  VSCADIL    RDS    G  +++V
Sbjct: 62  TAEKDAIPNNPSLRG--FEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQV 119

Query: 142 PTGRRDGRVSIRAEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSV 201
           P+GRRDG VS+ +EA   IP+P  N T L  SFAN+ L   ++V LSGAH+IGV+HC+S 
Sbjct: 120 PSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSF 179

Query: 202 SSRLYNFTGVGDQDPALDSEYAANLKARKC--RTPNDNTTLLEMDPGSRKTFDLSYYNLL 259
           ++RLYNF      DP L   YAA L+   C   +       + +D  +    D  YY  +
Sbjct: 180 TNRLYNFNSGSGIDPTLSPSYAALLR-NTCPANSTRFTPITVSLDIITPSVLDNMYYTGV 238

Query: 260 LKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRK 319
               GL  SD +L T +   + VK     +L  + ++FA+++ KMG+ +V TG++GEIR 
Sbjct: 239 QLTLGLLTSDQALVTEANLSAAVKANA-MNLTAWASKFAQAMVKMGQIEVLTGTQGEIRT 297

Query: 320 RCAFVN 325
            C+ VN
Sbjct: 298 NCSVVN 303
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query325
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=2.1e-110  Score=794.45  Aligned_cols=297  Identities=45%  Similarity=0.758  Sum_probs=288.4

Q ss_pred             cCcCcccCCCchHHHHHHHHHHHHHHhCCCchhhhhHhhhccccccCCCceEEecCC-CC-CccCCCCCC-CCCCcchHH
Q 048664           25 LQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNST-GN-PERNAVPNQ-TLTGATFDF  101 (325)
Q Consensus        25 L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~a~~llRL~FHDcfv~GcDgSill~~~-~~-~E~~~~~N~-~L~g~~~~~  101 (325)
                      |+++||++|||++|+|||++|++++.+||+++|++||||||||||+||||||||+++ ++ .|+++++|. +|+|  |++
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrg--f~v   79 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRG--FEV   79 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCC--HHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHH--HHH
Confidence            789999999999999999999999999999999999999999999999999999987 43 499999998 8999  999


Q ss_pred             HHHHHHHHHhhCCCCCcHHHHHHhhhhhhhhccCCCCccccCCCcCCCCCchhhhhcCCCCCCCCHHHHHHHHHHcCCCc
Q 048664          102 IERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRAEAQNNIPAPTNNFTLLQRSFANQGLDL  181 (325)
Q Consensus       102 Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  181 (325)
                      ||+||++||++||++||||||||||||+||+++|||.|+|++||+|+++++..+++++||+|+.++++|++.|++|||++
T Consensus        80 id~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  159 (304)
T 3hdl_A           80 ITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTA  159 (304)
T ss_dssp             HHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCH
T ss_pred             HHHHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCH
Confidence            99999999999999999999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             ccceeeecccccccccccccccccccCCCCCCCCCCCCHHHHHHhhcccCCCCCC--CCCcccCCCCCCcccCcHHHHHH
Q 048664          182 KDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPND--NTTLLEMDPGSRKTFDLSYYNLL  259 (325)
Q Consensus       182 ~dlVaLsGaHTiG~~hc~~f~~Rl~~f~~~~~~dp~ld~~~~~~L~~~~Cp~~~~--~~~~~~lD~~tp~~FDn~Yy~~l  259 (325)
                      +||||||||||||++||.+|.+|||||+|++.+||+||+.|++.||. .||..++  +++.++||+.||.+|||+||+||
T Consensus       160 ~d~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~-~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~nL  238 (304)
T 3hdl_A          160 DEMVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRN-TCPANSTRFTPITVSLDIITPSVLDNMYYTGV  238 (304)
T ss_dssp             HHHHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHH-HSCTTCCTTSCCEEESCSSSTTSCSTHHHHHH
T ss_pred             HHhhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhc-cCCCCCCCCCccccCCCCCCcccccHHHHHHH
Confidence            99999999999999999999999999999888999999999999999 9997655  56678999999999999999999


Q ss_pred             hhcccccccccccccChhHHHHHHHHhcCCHHHHHHHHHHHHHHhhcCCCCCCCCCcccccCccCC
Q 048664          260 LKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN  325 (325)
Q Consensus       260 ~~~~glL~SD~~L~~d~~t~~~V~~y~A~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n  325 (325)
                      +.++|||+|||+|+.|++|+++|++| |.||++||++|++||+||++|+|+||.+||||++|++||
T Consensus       239 ~~~~glL~SDq~L~~d~~t~~~V~~y-A~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N  303 (304)
T 3hdl_A          239 QLTLGLLTSDQALVTEANLSAAVKAN-AMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVN  303 (304)
T ss_dssp             HTTCCCSHHHHGGGSSHHHHHHHHHH-HHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             HhCcCCCCCCHHHhcCccHHHHHHHh-ccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccC
Confidence            99999999999999999999999999 999999999999999999999999999999999999998
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 325
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-112
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-111
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-109
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-107
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-103
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-101
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 2e-53
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 2e-53
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 2e-51
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 5e-37
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 2e-36
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 9e-35
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  325 bits (833), Expect = e-112
 Identities = 127/306 (41%), Positives = 170/306 (55%), Gaps = 7/306 (2%)

Query: 24  QLQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN 83
           QL   FY ++CP    IV   +       P + AS +R+HFHDCFV+GCD SVLLN+T  
Sbjct: 1   QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDT 60

Query: 84  --PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKV 141
              E++A+PN        D +  +K  VE++CP  VSCADIL +    + V  GGP W V
Sbjct: 61  IESEQDALPNINSIRG-LDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPV 119

Query: 142 PTGRRDGRVSIRAEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSV 201
           P GRRD   + R  A  N+PAP  N T L+ SFA QGL+  DLV LSG HT G + C++ 
Sbjct: 120 PLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTF 179

Query: 202 SSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLK 261
            +RLYNF+  G+ DP L++ Y   L+  +C        L  +D  +   FD  YY+ LL+
Sbjct: 180 INRLYNFSNTGNPDPTLNTTYLEVLR-ARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQ 238

Query: 262 RRGLFVSDASLTTN--SFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRK 319
             GL  SD  L +   + T+ +V      +   FF+ F  S+ KMG   V TG EGEIR 
Sbjct: 239 LNGLLQSDQELFSTPGADTIPIVNSFS-SNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRL 297

Query: 320 RCAFVN 325
           +C FVN
Sbjct: 298 QCNFVN 303
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query325
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.97
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=1.2e-104  Score=755.27  Aligned_cols=298  Identities=43%  Similarity=0.768  Sum_probs=288.4

Q ss_pred             ccCcCcccCCCchHHHHHHHHHHHHHHhCCCchhhhhHhhhccccccCCCceEEecCC-CC-CccCCCCCCC-CCCcchH
Q 048664           24 QLQLGFYAKSCPRAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNST-GN-PERNAVPNQT-LTGATFD  100 (325)
Q Consensus        24 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~a~~llRL~FHDcfv~GcDgSill~~~-~~-~E~~~~~N~~-L~g~~~~  100 (325)
                      ||+.+||++|||++|+|||++|++.+.+||+++|++|||+||||||+||||||||+++ ++ .|+++++|.+ ++|  |+
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g--~~   78 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRG--LD   78 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCC--HH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchh--HH
Confidence            7999999999999999999999999999999999999999999999999999999987 44 4999999985 688  99


Q ss_pred             HHHHHHHHHHhhCCCCCcHHHHHHhhhhhhhhccCCCCccccCCCcCCCCCchhhhhcCCCCCCCCHHHHHHHHHHcCCC
Q 048664          101 FIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRAEAQNNIPAPTNNFTLLQRSFANQGLD  180 (325)
Q Consensus       101 ~Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~  180 (325)
                      +||.||++||+.||++||||||||||||+||+++|||.|+|++||+|+++|+..++..+||.|+.++++|+..|+++|||
T Consensus        79 ~id~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~  158 (304)
T d1fhfa_          79 VVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLN  158 (304)
T ss_dssp             HHHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999999999998888889999999999999999999999


Q ss_pred             cccceeeecccccccccccccccccccCCCCCCCCCCCCHHHHHHhhcccCCCCCCCCCcccCCCCCCcccCcHHHHHHh
Q 048664          181 LKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLL  260 (325)
Q Consensus       181 ~~dlVaLsGaHTiG~~hc~~f~~Rl~~f~~~~~~dp~ld~~~~~~L~~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~~l~  260 (325)
                      .+||||||||||||++||.+|..|+|+|++++.+||++|+.|+..|+. .||.++.....+++|+.||.+|||+||++++
T Consensus       159 ~~d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~-~c~~~~~~~~~~~~d~~tp~~fDn~Yy~~l~  237 (304)
T d1fhfa_         159 TLDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRA-RCPQNATGDNLTNLDLSTPDQFDNRYYSNLL  237 (304)
T ss_dssp             HHHHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHH-HSCSSCSSCCEEESCSSSTTSCSTHHHHHHH
T ss_pred             HHHHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHH-hcCCCCCCCcccccCCCCCCccccHHHHHHh
Confidence            999999999999999999999999999999989999999999999999 9998776667888999999999999999999


Q ss_pred             hcccccccccccccCh--hHHHHHHHHhcCCHHHHHHHHHHHHHHhhcCCCCCCCCCcccccCccCC
Q 048664          261 KRRGLFVSDASLTTNS--FTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN  325 (325)
Q Consensus       261 ~~~glL~SD~~L~~d~--~t~~~V~~y~A~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n  325 (325)
                      +++|+|+|||+|+.||  +|+++|++| |.||++|+++|++||+||++|+|+||.+||||++|+++|
T Consensus       238 ~~~glL~SD~~L~~dp~~~t~~~V~~y-A~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N  303 (304)
T d1fhfa_         238 QLNGLLQSDQELFSTPGADTIPIVNSF-SSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVN  303 (304)
T ss_dssp             TTCCSSHHHHTTTSSTTCSSHHHHHHH-HHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             hcCcccHhhHHHHhCCCchHHHHHHHH-hhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcC
Confidence            9999999999999997  699999999 999999999999999999999999999999999999998
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure