Citrus Sinensis ID: 048705

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------
GVASRDYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIKFSFPMAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYMKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFVRHADKFICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLSYFKAYPHP
cccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEccccccEEEccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccccccccEEEEcccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccccccccccccEEcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccHHHHHHHHHHcccccc
ccccccHHHHHHHHHHHHHHcEcEcccccccEcccccEcccccccccccccccEcccccccEEHHHHHHHHHHHHHHHHHcHHHHHHcHHHHHHHHHHHHHHHHHcccccccEEEEEccHHHHHcccccHHHccccccEEEEccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEcccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccHccccccccccEccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccEEEccccEEEEcccccHHHHHHHHHHHHHHHHHHHHccccEEcccccccHHHHHHHHHHHHHHHHcccccccccEcccccccccccEcHHHHcccccccccccccccccccHcccccccccccccEcccccccccccccccccccccccHHHHHHHHHHHHHHHccccc
gvasrdygDALSKCVLffegqrsgklpstqrmtwrkdsalrdgadvGVDLVggyydagdnikfsfpmaFTTTMLAWSILEfgshmgpeqKNAQEALKWGTDYFLkatsvpgkviaqvgepnadhncwerpedmdtprtsyvvnttnpgseVSAEIAAALAASSIVFKSANSQYSKILLQRASQVFQFAdqyqgsyntsvgsgvcpyycdfdgymnfmdSAFQDELIWAAAWLFKATNRQSYMKYVVDNIHYLENstmrqskealfvggsfaefgwdakHAGINVLISRLVmntsksdpfvrhADKFIcsvlpesptklvtyssggllfkpggsnsqHVTAMSFLLLVYSRYLTRFHRSlecgniavtpsRLIQVAKTQADyllgsnplsmsymvgygrkfprrihhrgsslpsidthpkhvkclegsiffkskypnfnlltgaivggpdindqyndtrinwsqsepttyinapfvGVLSYFKAYPHP
gvasrdygdalsKCVLffegqrsgklpstqrmtwrkdsalrdgadVGVDLVGGYYDAGDNIKFSFPMAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYMKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFVRHADKFICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGsslpsidthpkHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLSYFKAYPHP
GVASRDYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRdgadvgvdlvggyydagdNIKFSFPMAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGsevsaeiaaalaassivFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYMKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFVRHADKFICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLSYFKAYPHP
*********ALSKCVLFFEG*************WRKDSALRDGADVGVDLVGGYYDAGDNIKFSFPMAFTTTMLAWSIL****************LKWGTDYFLKATSVPGKVIAQVGEPNADHNCW*************************AEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYMKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFVRHADKFICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLSYFKAY***
GVASRDYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIKFSFPMAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYMKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFVRHADKFICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLSYFKAY***
********DALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIKFSFPMAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYMKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFVRHADKFICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLSYFKAYPHP
***SRDYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIKFSFPMAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYMKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFVRHADKFICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLSYFKAYP**
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GVASRDYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIKFSFPMAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYMKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFVRHADKFICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLSYFKAYPHP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query487 2.2.26 [Sep-21-2011]
Q9CAC1492 Endoglucanase 8 OS=Arabid yes no 0.948 0.939 0.578 1e-164
O49296489 Endoglucanase 4 OS=Arabid no no 0.948 0.944 0.553 1e-157
Q93YQ7497 Endoglucanase 24 OS=Arabi no no 0.944 0.925 0.549 1e-153
Q69NF5515 Endoglucanase 23 OS=Oryza yes no 0.944 0.893 0.526 1e-149
Q652F9497 Endoglucanase 17 OS=Oryza no no 0.946 0.927 0.538 1e-148
O81416516 Endoglucanase 17 OS=Arabi no no 0.944 0.891 0.539 1e-148
Q6Z2J3508 Endoglucanase 6 OS=Oryza no no 0.948 0.909 0.548 1e-148
Q9SRX3501 Endoglucanase 1 OS=Arabid no no 0.936 0.910 0.547 1e-146
Q8LQ92499 Endoglucanase 3 OS=Oryza no no 0.946 0.923 0.523 1e-145
P05522494 Endoglucanase 1 OS=Persea N/A no 0.942 0.929 0.526 1e-139
>sp|Q9CAC1|GUN8_ARATH Endoglucanase 8 OS=Arabidopsis thaliana GN=CEL1 PE=2 SV=1 Back     alignment and function desciption
 Score =  578 bits (1489), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 280/484 (57%), Positives = 354/484 (73%), Gaps = 22/484 (4%)

Query: 3   ASRDYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIK 62
           A  DY DAL K +LFFEGQRSGKLP  QR+ WR+DSALRDG+  GVDL GGYYDAGDNIK
Sbjct: 25  AGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGVDLSGGYYDAGDNIK 84

Query: 63  FSFPMAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNA 122
           F FPMAFTTTML+WSI++FG  MGPE +NA +A+KWGTDY LKAT++PG V  QVG+  +
Sbjct: 85  FGFPMAFTTTMLSWSIIDFGKTMGPELRNAVKAVKWGTDYLLKATAIPGVVFVQVGDAYS 144

Query: 123 DHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRAS 182
           DHNCWERPEDMDT RT Y ++  +PGS+V+ E AAALAA+SIVF+  +  YS++LL RA+
Sbjct: 145 DHNCWERPEDMDTLRTVYKIDRAHPGSDVAGETAAALAAASIVFRKRDPAYSRLLLDRAT 204

Query: 183 QVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYM 242
           +VF FA++Y+G+Y+ S+   VCP+YCDF+GY        QDEL+W AAWL KA+ +++Y 
Sbjct: 205 RVFAFANRYRGAYSNSLYHAVCPFYCDFNGY--------QDELLWGAAWLHKASRKRAYR 256

Query: 243 KYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKS--DPFV 300
           +++V N            +  L  G +  EFGWD KHAGINVLIS+ V+       + F 
Sbjct: 257 EFIVKN------------EVILKAGDTINEFGWDNKHAGINVLISKEVLMGKAEYFESFK 304

Query: 301 RHADKFICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLE 360
           ++AD FICS+LP      V YS GGLL K GGSN QHVT++SFLLL YS YL+   + + 
Sbjct: 305 QNADGFICSILPGISHPQVQYSRGGLLVKTGGSNMQHVTSLSFLLLAYSNYLSHAKKVVP 364

Query: 361 CGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHPKH 420
           CG +  +PS L Q+AK Q DY+LG NP+ +SYMVGYG+KFPRRIHHRGSS+PS+  HP H
Sbjct: 365 CGELTASPSLLRQIAKRQVDYILGDNPMGLSYMVGYGQKFPRRIHHRGSSVPSVSAHPSH 424

Query: 421 VKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLSY 480
           + C EGS +F S  PN NLL GA+VGGP++ D + D+R  + QSEPTTYINAP VG+L Y
Sbjct: 425 IGCKEGSRYFLSPNPNPNLLVGAVVGGPNVTDAFPDSRPYFQQSEPTTYINAPLVGLLGY 484

Query: 481 FKAY 484
           F A+
Sbjct: 485 FSAH 488
Required for cellulose formation of the cell wall.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|O49296|GUN4_ARATH Endoglucanase 4 OS=Arabidopsis thaliana GN=At1g23210 PE=2 SV=1 Back     alignment and function description
>sp|Q93YQ7|GUN24_ARATH Endoglucanase 24 OS=Arabidopsis thaliana GN=At4g39010 PE=2 SV=1 Back     alignment and function description
>sp|Q69NF5|GUN23_ORYSJ Endoglucanase 23 OS=Oryza sativa subsp. japonica GN=GLU12 PE=2 SV=1 Back     alignment and function description
>sp|Q652F9|GUN17_ORYSJ Endoglucanase 17 OS=Oryza sativa subsp. japonica GN=GLU13 PE=2 SV=1 Back     alignment and function description
>sp|O81416|GUN17_ARATH Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1 Back     alignment and function description
>sp|Q6Z2J3|GUN6_ORYSJ Endoglucanase 6 OS=Oryza sativa subsp. japonica GN=Os02g0733300 PE=2 SV=1 Back     alignment and function description
>sp|Q9SRX3|GUN1_ARATH Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE=2 SV=1 Back     alignment and function description
>sp|Q8LQ92|GUN3_ORYSJ Endoglucanase 3 OS=Oryza sativa subsp. japonica GN=GLU8 PE=2 SV=1 Back     alignment and function description
>sp|P05522|GUN1_PERAE Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query487
255539745506 endo-1,4-beta-glucanase, putative [Ricin 0.977 0.940 0.670 0.0
255539747503 endo-1,4-beta-glucanase, putative [Ricin 0.981 0.950 0.651 0.0
224134476487 predicted protein [Populus trichocarpa] 0.981 0.981 0.637 0.0
224134480490 predicted protein [Populus trichocarpa] 0.938 0.932 0.658 0.0
359490284507 PREDICTED: endoglucanase 8-like [Vitis v 0.977 0.938 0.650 1e-180
429326588490 korrigan [Populus tomentosa] 0.936 0.930 0.647 1e-179
296084192470 unnamed protein product [Vitis vinifera] 0.946 0.980 0.641 1e-176
356544261486 PREDICTED: endoglucanase 8-like [Glycine 0.936 0.938 0.612 1e-171
356515070476 PREDICTED: endoglucanase 8-like [Glycine 0.942 0.964 0.606 1e-171
356544263489 PREDICTED: endoglucanase 8-like [Glycine 0.940 0.936 0.627 1e-171
>gi|255539745|ref|XP_002510937.1| endo-1,4-beta-glucanase, putative [Ricinus communis] gi|223550052|gb|EEF51539.1| endo-1,4-beta-glucanase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  699 bits (1805), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/485 (67%), Positives = 394/485 (81%), Gaps = 9/485 (1%)

Query: 2   VASRDYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNI 61
           VAS+DYG+ALSKC+LFFEGQRSGKLPSTQRM WR+DSAL+DG+D+GVDL GGYYDAGDNI
Sbjct: 24  VASQDYGEALSKCILFFEGQRSGKLPSTQRMNWREDSALQDGSDIGVDLTGGYYDAGDNI 83

Query: 62  KFSFPMAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPN 121
           KF+FPMAFTTT+LAWS+LEFG  MG + K A +A++W TDYF+KATSVPG V+AQ+GEP 
Sbjct: 84  KFNFPMAFTTTLLAWSVLEFGQLMGTDMKYAVDAIRWSTDYFMKATSVPGSVVAQIGEPI 143

Query: 122 ADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRA 181
            DHNCWERPEDMDT RT+YVVN T PGSEVSAEIAAAL ASS+VFK+ +S+YS +LLQRA
Sbjct: 144 NDHNCWERPEDMDTQRTTYVVNQTYPGSEVSAEIAAALTASSLVFKTIDSEYSNLLLQRA 203

Query: 182 SQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSY 241
            QVF FAD+YQGSY++SVG GVCP+YCD +GY        +DEL W A+WLFKATN   Y
Sbjct: 204 FQVFDFADKYQGSYDSSVGPGVCPFYCDSNGY--------KDELAWGASWLFKATNDNKY 255

Query: 242 MKYVVDNIHYLENSTMRQSKEAL-FVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFV 300
             Y+   ++  ++  + ++ + +  +  SF EFGWD+K  GINVL+S LV N S  +PF+
Sbjct: 256 WDYIQQIMNSSKSMVITRTDDVVNSLRDSFTEFGWDSKQGGINVLVSGLVGNGSDQNPFI 315

Query: 301 RHADKFICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLE 360
           + ADK +CS+LPESPTK VTYS+GGLLFKPG SN QH TA+SFLLLVYSRYL +  R ++
Sbjct: 316 QDADKLVCSILPESPTKFVTYSAGGLLFKPGSSNLQHTTALSFLLLVYSRYLEQSRRVVK 375

Query: 361 CGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHPKH 420
           CGN+  TP+RL+ VAK Q DY+LG NPL MSYMVGYG K+P+RIHHRGS+LP I  HP+H
Sbjct: 376 CGNVVATPTRLVAVAKGQVDYILGRNPLGMSYMVGYGNKYPQRIHHRGSTLPMIQNHPQH 435

Query: 421 VKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLSY 480
           + C EG+ +F+S  PN N+L GAIVGGPDINDQY D R+N SQSEPTTYINAPFVGVL+Y
Sbjct: 436 IGCKEGTPYFESNNPNPNVLVGAIVGGPDINDQYVDDRLNVSQSEPTTYINAPFVGVLAY 495

Query: 481 FKAYP 485
            KA+P
Sbjct: 496 LKAHP 500

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255539747|ref|XP_002510938.1| endo-1,4-beta-glucanase, putative [Ricinus communis] gi|223550053|gb|EEF51540.1| endo-1,4-beta-glucanase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224134476|ref|XP_002321833.1| predicted protein [Populus trichocarpa] gi|222868829|gb|EEF05960.1| predicted protein [Populus trichocarpa] gi|347466565|gb|AEO97195.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466619|gb|AEO97222.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|429326586|gb|AFZ78633.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|224134480|ref|XP_002321834.1| predicted protein [Populus trichocarpa] gi|222868830|gb|EEF05961.1| predicted protein [Populus trichocarpa] gi|347466567|gb|AEO97196.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466621|gb|AEO97223.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359490284|ref|XP_002264822.2| PREDICTED: endoglucanase 8-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|429326588|gb|AFZ78634.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|296084192|emb|CBI24580.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356544261|ref|XP_003540572.1| PREDICTED: endoglucanase 8-like [Glycine max] Back     alignment and taxonomy information
>gi|356515070|ref|XP_003526224.1| PREDICTED: endoglucanase 8-like [Glycine max] Back     alignment and taxonomy information
>gi|356544263|ref|XP_003540573.1| PREDICTED: endoglucanase 8-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query487
TAIR|locus:2028015489 GH9B6 "glycosyl hydrolase 9B6" 0.533 0.531 0.496 2.8e-137
TAIR|locus:2120242497 GH9B18 "glycosyl hydrolase 9B1 0.948 0.929 0.495 1.3e-125
TAIR|locus:2017704484 CEL5 "cellulase 5" [Arabidopsi 0.482 0.485 0.475 4e-121
TAIR|locus:2825314484 CEL3 "cellulase 3" [Arabidopsi 0.486 0.489 0.467 1.4e-118
TAIR|locus:2118519478 GH9B14 "glycosyl hydrolase 9B1 0.472 0.481 0.444 1.1e-112
TAIR|locus:2120232493 GH9B17 "glycosyl hydrolase 9B1 0.950 0.939 0.441 2.2e-112
TAIR|locus:2128394479 GH9B15 "glycosyl hydrolase 9B1 0.472 0.480 0.440 1.9e-110
TAIR|locus:2042451491 GH9B11 "glycosyl hydrolase 9B1 0.482 0.478 0.429 1.2e-100
TAIR|locus:2042376491 GH9B9 "glycosyl hydrolase 9B9" 0.482 0.478 0.425 1.8e-99
TAIR|locus:2042441490 GH9B10 "glycosyl hydrolase 9B1 0.480 0.477 0.422 6e-99
TAIR|locus:2028015 GH9B6 "glycosyl hydrolase 9B6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 702 (252.2 bits), Expect = 2.8e-137, Sum P(2) = 2.8e-137
 Identities = 139/280 (49%), Positives = 189/280 (67%)

Query:   208 CDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYMKYVVDNIHYLENSTMRQSKEALFVG 267
             C F  Y +F  + ++DEL+W AAWL KA+ ++ Y +++V N            +  L  G
Sbjct:   226 CPF--YCDF--NGYEDELLWGAAWLHKASKKRVYREFIVKN------------QVILRAG 269

Query:   268 GSFAEFGWDAKHAGINVLISRLVMNTSKSD---PFVRHADKFICSVLPESPTKLVTYSSG 324
              +  EFGWD KHAGINVL+S++V+   K++    F ++AD+FICS+LP      V YS G
Sbjct:   270 DTIHEFGWDNKHAGINVLVSKMVL-MGKAEYFQSFKQNADEFICSLLPGISHPQVQYSQG 328

Query:   325 GLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLG 384
             GLL K GGSN QHVT++SFLLL YS YL+  ++ + CG    +P+ L QVAK Q DY+LG
Sbjct:   329 GLLVKSGGSNMQHVTSLSFLLLTYSNYLSHANKVVPCGEFTASPALLRQVAKRQVDYILG 388

Query:   385 SNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAI 444
              NP+ MSYMVGYG +FP++IHHRGSS+PS+  HP  + C +GS +F S  PN NLL GA+
Sbjct:   389 DNPMKMSYMVGYGSRFPQKIHHRGSSVPSVVDHPDRIGCKDGSRYFFSNNPNPNLLIGAV 448

Query:   445 VGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLSYFKAY 484
             VGGP+I D + D+R  +  +EPTTYINAP +G+L YF A+
Sbjct:   449 VGGPNITDDFPDSRPYFQLTEPTTYINAPLLGLLGYFSAH 488
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
TAIR|locus:2120242 GH9B18 "glycosyl hydrolase 9B18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017704 CEL5 "cellulase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2825314 CEL3 "cellulase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118519 GH9B14 "glycosyl hydrolase 9B14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120232 GH9B17 "glycosyl hydrolase 9B17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128394 GH9B15 "glycosyl hydrolase 9B15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042451 GH9B11 "glycosyl hydrolase 9B11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042376 GH9B9 "glycosyl hydrolase 9B9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042441 GH9B10 "glycosyl hydrolase 9B10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P05522GUN1_PERAE3, ., 2, ., 1, ., 40.52690.94250.9291N/Ano
Q9CAC1GUN8_ARATH3, ., 2, ., 1, ., 40.57850.94860.9390yesno
Q69NF5GUN23_ORYSJ3, ., 2, ., 1, ., 40.52650.94450.8932yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.40.946
3rd Layer3.2.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query487
PLN02308492 PLN02308, PLN02308, endoglucanase 0.0
PLN02266510 PLN02266, PLN02266, endoglucanase 0.0
PLN03009495 PLN03009, PLN03009, cellulase 0.0
pfam00759437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 0.0
PLN02613498 PLN02613, PLN02613, endoglucanase 1e-176
PLN02175484 PLN02175, PLN02175, endoglucanase 1e-176
PLN02171 629 PLN02171, PLN02171, endoglucanase 1e-176
PLN00119489 PLN00119, PLN00119, endoglucanase 1e-172
PLN02909486 PLN02909, PLN02909, Endoglucanase 1e-168
PLN02340 614 PLN02340, PLN02340, endoglucanase 1e-165
PLN02345469 PLN02345, PLN02345, endoglucanase 1e-159
PLN02420525 PLN02420, PLN02420, endoglucanase 1e-158
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information 
 Score =  643 bits (1660), Expect = 0.0
 Identities = 279/487 (57%), Positives = 354/487 (72%), Gaps = 22/487 (4%)

Query: 3   ASRDYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIK 62
           A  DY DAL K +LFFEGQRSGKLP  QR+ WR+DSAL DG+  GVDL GGYYDAGDN+K
Sbjct: 25  AGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALHDGSSAGVDLTGGYYDAGDNVK 84

Query: 63  FSFPMAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNA 122
           F FPMAFTTT+++WSI++FG  MGPE +NA +A+KW TDY +KAT++P  V  QVG+  +
Sbjct: 85  FGFPMAFTTTLMSWSIIDFGRTMGPELENAVKAVKWATDYLMKATAIPNVVYVQVGDAYS 144

Query: 123 DHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRAS 182
           DHNCWERPEDMDT RT Y ++ ++PGS+V+ E AAALAA+SIVF+  +  YS++LL RA 
Sbjct: 145 DHNCWERPEDMDTLRTVYKIDPSHPGSDVAGETAAALAAASIVFRKRDPAYSRLLLDRAV 204

Query: 183 QVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYM 242
           +VF FAD+Y+G+Y++S+ + VCP+YCDF+GY        QDEL+W AAWL KA+ R+ Y 
Sbjct: 205 RVFAFADKYRGAYSSSLHAAVCPFYCDFNGY--------QDELLWGAAWLHKASRRREYR 256

Query: 243 KYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKS--DPFV 300
           +Y+V N            +  L  G +  EFGWD KHAGINVLIS+ V+         F 
Sbjct: 257 EYIVKN------------EVILGAGDTINEFGWDNKHAGINVLISKEVLMGKAEYFQSFK 304

Query: 301 RHADKFICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLE 360
           ++AD FICS+LP      V YS GGLLFK GGSN QHVT++SFLLL YS YL+  ++ + 
Sbjct: 305 QNADGFICSLLPGISHPQVQYSPGGLLFKVGGSNMQHVTSLSFLLLAYSNYLSHANKVVP 364

Query: 361 CGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHPKH 420
           CG    +P+ L QVAK Q DY+LG NPL MSYMVGYG +FP+RIHHRGSSLPS+  HP  
Sbjct: 365 CGESTASPALLRQVAKRQVDYILGDNPLRMSYMVGYGSRFPQRIHHRGSSLPSVAAHPAR 424

Query: 421 VKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLSY 480
           + C EGS +F S  PN NLL GA+VGGP++ D + D+R  + QSEPTTYINAP VG+L+Y
Sbjct: 425 IGCKEGSRYFLSPNPNPNLLVGAVVGGPNVTDAFPDSRPYFQQSEPTTYINAPLVGLLAY 484

Query: 481 FKAYPHP 487
           F A+P+P
Sbjct: 485 FSAHPNP 491

Length = 492
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 487
PLN02266510 endoglucanase 100.0
PLN02175484 endoglucanase 100.0
PLN02308492 endoglucanase 100.0
PLN02909486 Endoglucanase 100.0
PLN02340 614 endoglucanase 100.0
PLN00119489 endoglucanase 100.0
PLN03009495 cellulase 100.0
PLN02613498 endoglucanase 100.0
PLN02420525 endoglucanase 100.0
PLN02171 629 endoglucanase 100.0
PLN02345469 endoglucanase 100.0
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 97.36
KOG2787403 consensus Lanthionine synthetase C-like protein 1 96.36
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 96.05
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 94.46
COG1331667 Highly conserved protein containing a thioredoxin 94.41
COG3533 589 Uncharacterized protein conserved in bacteria [Fun 93.02
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 92.48
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 91.03
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 87.44
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 85.65
>PLN02266 endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=4.3e-127  Score=1004.53  Aligned_cols=462  Identities=56%  Similarity=1.030  Sum_probs=432.4

Q ss_pred             CCchhHHHHHHHHHhhhHhhcCCCCCCCCCCCCCCCCCCCCCCCCccccccceeccCCCcccccchHHHHHHHHHHHHHh
Q 048705            2 VASRDYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIKFSFPMAFTTTMLAWSILEF   81 (487)
Q Consensus         2 i~~~~Y~~~l~~sl~fy~~QRsG~~p~~~~~~w~~~s~~~Dg~~~~~dlsGGW~DAGD~~Ky~~~~a~t~~~L~~a~~e~   81 (487)
                      |++++|.++|++||+||++||||++|+.++++||+++++.||.+.++||+|||||||||+||++|+|+|+++|+|+++||
T Consensus        42 ~~~~~Y~~aL~~sl~fy~~QRsG~lp~~~~~~Wr~ds~~~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~s~t~L~w~~~ef  121 (510)
T PLN02266         42 LASHNYRDALTKSILFFEGQRSGKLPSSQRMTWRRDSGLSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEF  121 (510)
T ss_pred             CCcchHHHHHHHHHHHHHHhcCcCCCcccCCCCcccCCCCCCCcCcccCCCcceeCCCCceecchHHHHHHHHHHHHHhh
Confidence            78899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCchHHHHHHHHHHHHHHHHhccCCCceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHHHHH
Q 048705           82 GSHMGPEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAA  161 (487)
Q Consensus        82 ~~~~~~~~pdiLde~kwg~d~llkm~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~  161 (487)
                      ++.|++++|||||||||++|||||||+.+|+||+|||+++.||.+|++||+++.+|++|.|+.++|||++++++|||||+
T Consensus       122 ~~~~~~~~pd~Ldelkw~~D~llk~~~~~~~vy~qVg~~~~Dh~~W~~Pe~~~~~R~~y~i~~~~pgsd~a~e~AAALAa  201 (510)
T PLN02266        122 GGLMKSELQNAKDAIRWATDYLLKATAHPDTIYVQVGDANKDHACWERPEDMDTPRSVFKVDKNTPGSDVAAETAAALAA  201 (510)
T ss_pred             hhccccccHHHHHHHHHHHHHHHHhccCCCeEEEEeCCCCCCcccCCChhhcCCCCeeEEeCCCCCchHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhccccHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCccccCCcccchHHHHHHHHHHHHcCchhH
Q 048705          162 SSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSY  241 (487)
Q Consensus       162 as~vf~~~D~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~~~~d~~~~De~~wAA~~Ly~aTg~~~Y  241 (487)
                      ||||||++||+||++||++||++|+||+++|+.|...+.+..++||.++++|        .||++|||+|||++|||++|
T Consensus       202 as~vfk~~D~~yA~~~L~~Ak~ly~fa~~~~g~y~~~~~~~~~~~y~s~s~~--------~DEl~WAAawLy~ATGd~~Y  273 (510)
T PLN02266        202 ASLVFRKSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKPDVCPFYCSYSGY--------QDELLWGAAWLHKATKNPTY  273 (510)
T ss_pred             HHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCCccCCCCcccCCCcccCCcc--------hHHHHHHHHHHHHHhCCHHH
Confidence            9999999999999999999999999999999998765433357899887788        99999999999999999999


Q ss_pred             HHHHHHhhhhhhhhhhhhhhhhhhcCCCccccCcchhhHHHHHHHchhccCc-hh-hhHHHHHHHHHHHHhCCCCCCCcc
Q 048705          242 MKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNT-SK-SDPFVRHADKFICSVLPESPTKLV  319 (487)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~W~~~~~g~~~lla~~~~~~-~~-~~~~~~~ad~~~~~~~~~~~~~~~  319 (487)
                      +++++.....++            .......|+||+|..|+++||++..... .+ ++.++..++.++|.+.+++++..+
T Consensus       274 l~~~~~~~~~~g------------~~~~~~~~~WD~k~~ga~vLLa~~~~~~~~~~~~~yk~~~d~~~~~~~~~~~~~~~  341 (510)
T PLN02266        274 LNYIQVNGQILG------------ADEFDNTFGWDNKHVGARILLSKAFLVQKVQSLHEYKGHADNFICSVIPGAPFSST  341 (510)
T ss_pred             HHHHHHHHhhcc------------ccccCCccCcchhHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHhccCCCCCCcc
Confidence            999987654333            0123458999999999999998843322 23 778999999999999888887778


Q ss_pred             cccCCCceecCCCCchHHHHHHHHHHHHHHHHhhhcccccccCCCcCChHHHHHHHHHhchhhcCCCCCCCceEeeeCCC
Q 048705          320 TYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRK  399 (487)
Q Consensus       320 ~~t~~g~~w~~~~~n~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~~~SyVtG~G~~  399 (487)
                      ++||+|+.|+.+|+|+||++|++||+++|++++...+..++||+......+|+++|++|||||||+||+++|||||||.|
T Consensus       342 ~~TpGGL~~~~~wg~lrYa~~~afla~vya~~l~~~~~~~~cg~~~~~~~~~~~fA~~QidYiLG~NP~~~SyvVG~G~~  421 (510)
T PLN02266        342 QYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAKTVVNCGGTVVTPARLRSIAKKQVDYLLGDNPLKMSYMVGYGPR  421 (510)
T ss_pred             ccCCCeeEEeCCCCcHHHHHHHHHHHHHHHHHHHhcCCceecCCCccCHHHHHHHHHhhhceeccCCCCCCceEEecCCC
Confidence            99999999999999999999999999999999987777899998888899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccccCCCcccccCCCCCCCCccceeecCCCCCCCcccCCCccccccccccCchHHHHHHH
Q 048705          400 FPRRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLS  479 (487)
Q Consensus       400 ~p~~pHHR~a~~~~~~~~p~~~~c~~g~~~~~~~~p~~~~~~GalvGGPn~~d~y~D~~~~~~~nEvaid~NA~lv~~la  479 (487)
                      +|++||||.||||++..+|.++.|.+||.|++++.||||+|.||||||||..|.|.|+|.+|++|||||||||+||++||
T Consensus       422 ~P~~pHHR~as~p~~~~~~~~~~C~~g~~~~~~~~~n~~vL~GAlVGGPd~~D~y~D~r~~y~~nEva~dyNA~~vgalA  501 (510)
T PLN02266        422 YPRRIHHRGSSLPSVAAHPAKIQCSQGFSIMNSQSPNPNVLVGAVVGGPDQHDRFPDERSDYEQSEPATYINAPLVGALA  501 (510)
T ss_pred             CCccccccCCCCCCcccCccccCCCCCccccCCCCCCcceecceeecCCCCCCCCCccccccccCcceeecchHHHHHHH
Confidence            99999999999999988999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhhc
Q 048705          480 YFKA  483 (487)
Q Consensus       480 ~l~~  483 (487)
                      +|.+
T Consensus       502 ~l~~  505 (510)
T PLN02266        502 YLAH  505 (510)
T ss_pred             HHHH
Confidence            9975

>PLN02175 endoglucanase Back     alignment and domain information
>PLN02308 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN02340 endoglucanase Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN02420 endoglucanase Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query487
1ks8_A433 The Structure Of Endoglucanase From Termite, Nasuti 9e-66
1js4_A 605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 4e-54
2xfg_A466 Reassembly And Co-Crystallization Of A Family 9 Pro 9e-49
1ga2_A 614 The Crystal Structure Of Endoglucanase 9g From Clos 1e-43
1k72_A 614 The X-ray Crystal Structure Of Cel9g Complexed With 1e-43
4dod_A475 The Structure Of Cbescii Cela Gh9 Module Length = 4 5e-41
1ia6_A441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 6e-34
2yik_A611 Catalytic Domain Of Clostridium Thermocellum Celt L 1e-28
1ut9_A609 Structural Basis For The Exocellulase Activity Of T 4e-07
3ez8_A537 Crystal Structure Of Endoglucanase Cel9a From The T 4e-07
1rq5_A610 Structural Basis For The Exocellulase Activity Of T 1e-05
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score =  247 bits (631), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 156/485 (32%), Positives = 236/485 (48%), Gaps = 65/485 (13%)
Query: 6   DYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRXXXXXXXXXXXXXXXXXXNIKFSF 65
           DY   L   +LF+E QRSG+LP+ Q++TWRKDSAL                    +KF F
Sbjct: 4   DYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGF 63
Query: 66  PMAFTTTMLAWSILEF--GSHMGPEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNAD 123
           PMA+T T+LAW +++F  G        + ++A+KW TDYF+KA +   +   QVG+ +AD
Sbjct: 64  PMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDAD 123
Query: 124 HNCWERPEDMDTPRTSYVVNTTNPGXXXXXXXXXXXXXXXXXFKSANSQYSKILLQRASQ 183
           H  W RPEDM   R +Y ++T+ PG                 F++ +  YS  LL  A Q
Sbjct: 124 HAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHARQ 183
Query: 184 VFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSA-FQDELIWAAAWLFKATNRQSYM 242
           +F FA+ Y+G Y+ S+               NF  SA ++DEL+WAAAWL++ATN  +Y+
Sbjct: 184 LFDFANNYRGKYSDSITDA-----------RNFYASADYRDELVWAAAWLYRATNDNTYL 232
Query: 243 KYVVDNIHYLENSTMRQSKEALFVGGSFAEFG----WDAKHAGINVLISRLVMNTSKSDP 298
                            + E+L+       +G    WD+K +G+ VL+++L    +  D 
Sbjct: 233 N----------------TAESLYDEFGLQNWGGGLNWDSKVSGVQVLLAKLTNKQAYKDT 276
Query: 299 FVRHADKFICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRS 358
              + + ++ +   ++P  L+     G L        +H    +F++             
Sbjct: 277 VQSYVN-YLINNQQKTPKGLLYIDMWGTL--------RHAANAAFIM------------- 314
Query: 359 LECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHP 418
           LE   + ++ S   Q A+TQ DY LG      S++ G+G   P R HHR SS P     P
Sbjct: 315 LEAAELGLSASSYRQFAQTQIDYALGDG--GRSFVCGFGSNPPTRPHHRSSSCP-----P 367
Query: 419 KHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVL 478
               C   +  F S  PN+++L+GA+VGGPD ND Y D R ++  +E  T  NA F   L
Sbjct: 368 APATCDWNT--FNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSAL 425
Query: 479 SYFKA 483
           +   A
Sbjct: 426 AALVA 430
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure
>pdb|1UT9|A Chain A, Structural Basis For The Exocellulase Activity Of The Cellobiohydrolase Cbha From C. Thermocellum Length = 609 Back     alignment and structure
>pdb|3EZ8|A Chain A, Crystal Structure Of Endoglucanase Cel9a From The Thermoacidophilic Alicyclobacillus Acidocaldarius Length = 537 Back     alignment and structure
>pdb|1RQ5|A Chain A, Structural Basis For The Exocellulase Activity Of The Cellobiohydrolase Cbha From C. Thermocellum Length = 610 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query487
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 1e-164
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 1e-163
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 1e-161
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 1e-158
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 1e-154
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 1e-149
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 1e-144
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 1e-135
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 1e-132
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 9e-72
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
 Score =  475 bits (1225), Expect = e-164
 Identities = 170/482 (35%), Positives = 242/482 (50%), Gaps = 46/482 (9%)

Query: 6   DYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIKFSF 65
           +Y +AL K + F+E QRSGKLP   R++WR DS L DGADVG+DL GG+YDAGD++KF F
Sbjct: 5   NYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGF 64

Query: 66  PMAFTTTMLAWSILEFGSHM--GPEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNAD 123
           PMAFT TMLAW  +E         +    ++ L+W  DYF+KA   P  +  QVG+ +AD
Sbjct: 65  PMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDAD 124

Query: 124 HNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRASQ 183
           H  W   E M   R S+ V+ + PGS+V+AE AAA+AASSIVF   +  Y+  L+Q A Q
Sbjct: 125 HKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQ 184

Query: 184 VFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYMK 243
           ++ FAD Y+G Y+  V +G   +Y  + GY        QDEL+W A WL+KAT   SY+ 
Sbjct: 185 LYTFADTYRGVYSDCVPAG--AFYNSWSGY--------QDELVWGAYWLYKATGDDSYLA 234

Query: 244 YVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFVRHA 303
                  +L         +   +        WD K  G  VL+++          ++  A
Sbjct: 235 KAEYEYDFLSTE------QQTDLRSYRWTIAWDDKSYGTYVLLAKETGK----QKYIDDA 284

Query: 304 DKFICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGN 363
           ++++         + V YS GG+         ++    +F+ LVY++ +           
Sbjct: 285 NRWLDYWTVGVNGQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDP-------- 336

Query: 364 IAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHPKHVKC 423
             V   R    A  Q +Y LG NP + SY+VG+G   PR  HHR +     D+       
Sbjct: 337 --VRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGSWTDS------- 387

Query: 424 LEGSIFFKSKYPNFNLLTGAIVGGPD-INDQYNDTRINWSQSEPTTYINAPFVGVLSYFK 482
                   S   N ++L GA+VGGP   ND Y D R ++  +E  T  NA F   L+   
Sbjct: 388 ------IASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLV 441

Query: 483 AY 484
             
Sbjct: 442 EE 443
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query487
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 100.0
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 96.73
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 96.49
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 96.01
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 95.84
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 95.22
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 93.72
1nc5_A373 Hypothetical protein YTER; structural genomics, he 93.23
3pmm_A382 Putative cytoplasmic protein; structural genomics, 92.98
3k11_A445 Putative glycosyl hydrolase; structural genomics, 92.92
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 91.73
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 91.03
1nc5_A373 Hypothetical protein YTER; structural genomics, he 90.35
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 89.58
3pmm_A382 Putative cytoplasmic protein; structural genomics, 89.34
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 86.94
3k11_A445 Putative glycosyl hydrolase; structural genomics, 85.19
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 83.14
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
Probab=100.00  E-value=1.1e-113  Score=902.34  Aligned_cols=428  Identities=40%  Similarity=0.729  Sum_probs=384.9

Q ss_pred             chhHHHHHHHHHhhhHhhcCCCCCCCCCCCCCCCCCCCCCCCCccccccceeccCCCcccccchHHHHHHHHHHHHHhcc
Q 048705            4 SRDYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIKFSFPMAFTTTMLAWSILEFGS   83 (487)
Q Consensus         4 ~~~Y~~~l~~sl~fy~~QRsG~~p~~~~~~w~~~s~~~Dg~~~~~dlsGGW~DAGD~~Ky~~~~a~t~~~L~~a~~e~~~   83 (487)
                      ..+|.++|++||+||++||||++|++++++||++||++||++.++||+|||||||||+||++|+++|+++|+|+++||++
T Consensus         2 ~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~wr~ds~l~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~   81 (433)
T 1ks8_A            2 AYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGFPMAYTATVLAWGLIDFEA   81 (433)
T ss_dssp             CCCHHHHHHHHHHHHHHTBCBSCCTTCSCTTCCCBCTTCBCTTCCBCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHTHH
T ss_pred             CCcHHHHHHHHHHHHHHHcCCCCCcccCCCcCCcccccCCCcCcccCCCceeECCCCCeeccchHHHHHHHHHHHHHhHH
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCC--chHHHHHHHHHHHHHHHHhccCCCceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHHHHH
Q 048705           84 HMG--PEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAA  161 (487)
Q Consensus        84 ~~~--~~~pdiLde~kwg~d~llkm~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~  161 (487)
                      .|+  +++||||||||||+|||||||+++|.||+|||++..||.+|++||+++.+|++|.|+.++|||++++++|||||+
T Consensus        82 ~~~~~~~~~d~ldeikwg~D~llk~~~~~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAalA~  161 (433)
T 1ks8_A           82 GYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAA  161 (433)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHCCBTTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHH
T ss_pred             hhhcCCchHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHHHH
Confidence            997  889999999999999999999999999999999999999999999999999999999889999999999999999


Q ss_pred             hhhhhccccHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCccccCCcccchHHHHHHHHHHHHcCchhH
Q 048705          162 SSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSY  241 (487)
Q Consensus       162 as~vf~~~D~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~~~~d~~~~De~~wAA~~Ly~aTg~~~Y  241 (487)
                      ||||||++||+||++||++||++|+||++||+.|.+.++ ..++||++ ++|        .||++|||+|||++||+++|
T Consensus       162 as~vfk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~-~~~~~Y~s-s~~--------~DE~~WAAa~Ly~aTgd~~Y  231 (433)
T 1ks8_A          162 ASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSIT-DARNFYAS-ADY--------RDELVWAAAWLYRATNDNTY  231 (433)
T ss_dssp             HHHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSG-GGGGTSCC-CCT--------HHHHHHHHHHHHHHHCCHHH
T ss_pred             HHHhccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCC-cCCCCCCC-CCc--------ccHHHHHHHHHHHHhCCHHH
Confidence            999999999999999999999999999999999876543 24688888 777        99999999999999999999


Q ss_pred             HHHHHHhhhhhhhhhhhhhhhhhhcCCCccccCcchhhHHHHHHHchhccCchhhhHHHHHHHHHHHHhCCCCCCCcccc
Q 048705          242 MKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFVRHADKFICSVLPESPTKLVTY  321 (487)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~W~~~~~g~~~lla~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~  321 (487)
                      +++++++...++.            ......|+|+++.++++++|++. .+.   +.+++.++.++|.++.     .+.+
T Consensus       232 l~~~~~~~~~~~~------------~~~~~~~~Wd~~~~g~~~lla~~-~~~---~~~~~~~~~~~~~~~~-----~~~~  290 (433)
T 1ks8_A          232 LNTAESLYDEFGL------------QNWGGGLNWDSKVSGVQVLLAKL-TNK---QAYKDTVQSYVNYLIN-----NQQK  290 (433)
T ss_dssp             HHHHHHHHHHTTG------------GGSCCCCCSSCCHHHHHHHHHHH-HCC---HHHHHHHHHHHHHHHH-----TSCB
T ss_pred             HHHHHHHHHhcCc------------CcCcCCcCccchhhHHHHHHhhc-cCh---HHHHHHHHHHHHHHHh-----cCCc
Confidence            9999987754430            12346899999999999888762 332   3455555555555432     3456


Q ss_pred             cCCCceecCCCCchHHHHHHHHHHHHHHHHhhhcccccccCCCcCChHHHHHHHHHhchhhcCCCCCCCceEeeeCCCCC
Q 048705          322 SSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFP  401 (487)
Q Consensus       322 t~~g~~w~~~~~n~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~~~SyVtG~G~~~p  401 (487)
                      ||+|+.|...|+++++++|.+|+++++.++             .+++.+|+++|++|||||||+|  ++|||||||+|+|
T Consensus       291 tp~Gl~~~~~WGs~~~~~n~a~l~~~~~~~-------------~~~~~~y~~~A~~qldYiLG~n--~~SyvvG~G~~~p  355 (433)
T 1ks8_A          291 TPKGLLYIDMWGTLRHAANAAFIMLEAAEL-------------GLSASSYRQFAQTQIDYALGDG--GRSFVCGFGSNPP  355 (433)
T ss_dssp             CTTSCBCCCSTTHHHHHHHHHHHHHHHHHT-------------TSSHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCC
T ss_pred             CCCCceeecCCchhHHHHHHHHHHHHHHhc-------------CCCHHHHHHHHHHhHhhccCCC--CcceEeccCCCCC
Confidence            899999988899999999999999999763             1357899999999999999997  7899999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCccccCCCcccccCCCCCCCCccceeecCCCCCCCcccCCCccccccccccCchHHHHHHHHh
Q 048705          402 RRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLSYF  481 (487)
Q Consensus       402 ~~pHHR~a~~~~~~~~p~~~~c~~g~~~~~~~~p~~~~~~GalvGGPn~~d~y~D~~~~~~~nEvaid~NA~lv~~la~l  481 (487)
                      ++||||+++||..     |..|..|  +++++.|||++|+|+||||||..|+|.|+|.+|++|||||||||+||++||+|
T Consensus       356 ~~pHHR~s~~~~~-----~~~c~~~--~~~~~~pn~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l  428 (433)
T 1ks8_A          356 TRPHHRSSSCPPA-----PATCDWN--TFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAAL  428 (433)
T ss_dssp             SCCSCHHHHCCCT-----TSCCSHH--HHTCSSCCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHH
T ss_pred             CCCcchhhcCCCc-----ccccccc--ccCCCCCCCCCCccceecCCCcccCcCcCccccccccccHHhHHHHHHHHHHH
Confidence            9999999999874     3589766  57889999999999999999999999999999999999999999999999999


Q ss_pred             hcC
Q 048705          482 KAY  484 (487)
Q Consensus       482 ~~~  484 (487)
                      ...
T Consensus       429 ~~~  431 (433)
T 1ks8_A          429 VAL  431 (433)
T ss_dssp             HHT
T ss_pred             Hhc
Confidence            865
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 487
d1tf4a1460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 1e-162
d1g87a1454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 1e-151
d1ks8a_433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 1e-150
d1ia6a_431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 1e-142
d1ut9a1511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 1e-122
d1clca1441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 1e-107
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  465 bits (1198), Expect = e-162
 Identities = 170/479 (35%), Positives = 243/479 (50%), Gaps = 46/479 (9%)

Query: 6   DYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIKFSF 65
           +Y +AL K + F+E QRSGKLP   R++WR DS L DGADVG+DL GG+YDAGD++KF F
Sbjct: 5   NYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGF 64

Query: 66  PMAFTTTMLAWSILEFGSHM--GPEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNAD 123
           PMAFT TMLAW  +E         +    ++ L+W  DYF+KA   P  +  QVG+ +AD
Sbjct: 65  PMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDAD 124

Query: 124 HNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRASQ 183
           H  W   E M   R S+ V+ + PGS+V+AE AAA+AASSIVF   +  Y+  L+Q A Q
Sbjct: 125 HKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQ 184

Query: 184 VFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYMK 243
           ++ FAD Y+G Y+  V +G   +Y  + GY        QDEL+W A WL+KAT   SY+ 
Sbjct: 185 LYTFADTYRGVYSDCVPAG--AFYNSWSGY--------QDELVWGAYWLYKATGDDSYLA 234

Query: 244 YVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFVRHA 303
                  +L         +   +        WD K  G  VL+++          ++  A
Sbjct: 235 KAEYEYDFLSTE------QQTDLRSYRWTIAWDDKSYGTYVLLAKETGKQK----YIDDA 284

Query: 304 DKFICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGN 363
           ++++         + V YS GG+         ++    +F+ LVY++ +          +
Sbjct: 285 NRWLDYWTVGVNGQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVI----------D 334

Query: 364 IAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHPKHVKC 423
             V   R    A  Q +Y LG NP + SY+VG+G   PR  HHR +     D+       
Sbjct: 335 DPVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGSWTDS------- 387

Query: 424 LEGSIFFKSKYPNFNLLTGAIVGGPD-INDQYNDTRINWSQSEPTTYINAPFVGVLSYF 481
                   S   N ++L GA+VGGP   ND Y D R ++  +E  T  NA F   L+  
Sbjct: 388 ------IASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAML 440
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query487
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 91.8
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 90.22
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 86.77
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 85.18
d1w6ka1448 Lanosterol synthase {Human (Homo sapiens) [TaxId: 81.43
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

Probab=100.00  E-value=3.6e-106  Score=852.18  Aligned_cols=438  Identities=38%  Similarity=0.648  Sum_probs=377.3

Q ss_pred             chhHHHHHHHHHhhhHhhcCCCCCCCCCCCCCCCCCCCCCCCCccccccceeccCCCcccccchHHHHHHHHHHHHHhcc
Q 048705            4 SRDYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIKFSFPMAFTTTMLAWSILEFGS   83 (487)
Q Consensus         4 ~~~Y~~~l~~sl~fy~~QRsG~~p~~~~~~w~~~s~~~Dg~~~~~dlsGGW~DAGD~~Ky~~~~a~t~~~L~~a~~e~~~   83 (487)
                      +.+|.++|++||+||++||||.+|+.++++||++||+.||++.++||+|||||||||+||++|+++++++|+|++++|++
T Consensus         3 ~~~Y~~al~~sl~ff~~QRsG~~p~~~~~~wr~~s~~~Dg~~~~~DvsGGWyDAGD~~KY~~~~a~~~~~L~~a~~~~~~   82 (460)
T d1tf4a1           3 AFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESPE   82 (460)
T ss_dssp             SSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCHH
T ss_pred             CCCHHHHHHHHHHHHHHccCcCCCcccCCCCCccccCCCcccCcCCCCCCceeCCCcceecccHHHHHHHHHHHHHHChH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCC--chHHHHHHHHHHHHHHHHhccCCCceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHHHHH
Q 048705           84 HMG--PEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAA  161 (487)
Q Consensus        84 ~~~--~~~pdiLde~kwg~d~llkm~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~  161 (487)
                      .|+  +++||||||||||+|||+|||+++|.||+|||++..||.+|++|+.++.+|+.+.+..++|+|++++++|||||+
T Consensus        83 ~~~~~~~~pdlLdE~~wglD~llkmq~~~g~~y~qvgdg~~dh~~w~~~~~~~~~~~~~~~~~~~~~t~~~~~~aAalA~  162 (460)
T d1tf4a1          83 GYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAA  162 (460)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHH
T ss_pred             hhhcCCCcHHHHHHHHHHHHHHHhcccCCCeEEEEecCCCccccccCCCcCCCCCCCcceecCCCccHHHHHHHHHHHHH
Confidence            987  889999999999999999999999999999999999999999999999999999888788999999999999999


Q ss_pred             hhhhhccccHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCccccCCcccchHHHHHHHHHHHHcCchhH
Q 048705          162 SSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSY  241 (487)
Q Consensus       162 as~vf~~~D~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~~~~d~~~~De~~wAA~~Ly~aTg~~~Y  241 (487)
                      |||||+++||+||++||++||++|+||++||+.|.+.++  ..++|.        ++.++.||++|||+|||++|||++|
T Consensus       163 as~v~~~~d~~~A~~~l~aA~~a~~~a~~~~~~~~~~~~--~~~~~~--------~~~~~~De~~wAAaeLy~aTG~~~Y  232 (460)
T d1tf4a1         163 SSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVP--AGAFYN--------SWSGYQDELVWGAYWLYKATGDDSY  232 (460)
T ss_dssp             HHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTST--THHHHC--------CSSCSHHHHHHHHHHHHHHHCCHHH
T ss_pred             HHHhccccCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCcCC--------CccccchHHHHHHHHHHHHhCCHHH
Confidence            999999999999999999999999999999999876532  122332        3444599999999999999999999


Q ss_pred             HHHHHHhhhhhhhhhhhhhhhhhhcCCCccccCcchhhHHHHHHHchhccCchhhhHHHHHHHHHHHHhCCCCCCCcccc
Q 048705          242 MKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFVRHADKFICSVLPESPTKLVTY  321 (487)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~W~~~~~g~~~lla~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~  321 (487)
                      +++++.....+...   +.. .  .......++|+++..+..+++++. ..   +..++..++.+++.+........+++
T Consensus       233 ~~~a~~~~~~~~~~---~~~-~--~~~~~~~~~w~~~~~~~~~~la~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (460)
T d1tf4a1         233 LAKAEYEYDFLSTE---QQT-D--LRSYRWTIAWDDKSYGTYVLLAKE-TG---KQKYIDDANRWLDYWTVGVNGQRVPY  302 (460)
T ss_dssp             HHHHHHHGGGSCBC---TTS-S--CBCCSSCCSSSCCHHHHHHHHHHH-HC---CHHHHHHHHHHHHHTTTCBTTBCCCB
T ss_pred             HHHHHHHhhhcccc---ccc-c--cccccccccccchhHHHHHHHHHH-hh---hhHHHHHHHHHHHHHhhhcccccCCc
Confidence            99999876543310   000 0  112345689999988887777642 11   34566667777766554433336677


Q ss_pred             cCCCceecCCCCchHHHHHHHHHHHHHHHHhhhcccccccCCCcCChHHHHHHHHHhchhhcCCCCCCCceEeeeCCCCC
Q 048705          322 SSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFP  401 (487)
Q Consensus       322 t~~g~~w~~~~~n~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~~~SyVtG~G~~~p  401 (487)
                      +++++.|...|++.++++|.+++++++.+++..          ..++++|+++|++|||||||+||+++|||||+|.|+|
T Consensus       303 ~~~~~~~~~~WGsn~~~~n~a~~~~~a~~~~~~----------~~~~~~y~~~A~~qldylLG~Np~~~SyVtG~G~~~p  372 (460)
T d1tf4a1         303 SPGGMAVLDTWGALRYAANTAFVALVYAKVIDD----------PVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPP  372 (460)
T ss_dssp             CTTSCBCCCSSSHHHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCC
T ss_pred             CCCcceecCCCchHHHHHHHHHHHHHHHHHhcc----------cCCHHHHHHHHHHhhheecccCCCCcCCCccCCCCCC
Confidence            888888888899999999999999998865422          1246799999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCccccCCCcccccCCCCCCCCccceeecCCC-CCCCcccCCCccccccccccCchHHHHHHHH
Q 048705          402 RRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPD-INDQYNDTRINWSQSEPTTYINAPFVGVLSY  480 (487)
Q Consensus       402 ~~pHHR~a~~~~~~~~p~~~~c~~g~~~~~~~~p~~~~~~GalvGGPn-~~d~y~D~~~~~~~nEvaid~NA~lv~~la~  480 (487)
                      ++||||.++|+..             ++...+.|||++|+|+|||||| +.+||+|++++|++|||||||||+||++||+
T Consensus       373 ~~pHHR~s~~~~~-------------~~~~~~~p~~~~l~G~lvGGPn~~~~~y~D~~~~y~~nEvai~~NA~lv~~la~  439 (460)
T d1tf4a1         373 RNPHHRTAHGSWT-------------DSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAM  439 (460)
T ss_dssp             SCCSCHHHHTCSS-------------SCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHH
T ss_pred             CCCcCccccCCCc-------------cccCCCCCCCCCcceeEecCCCCCCCCcCcCcchhhhhhhHHHHHHHHHHHHHH
Confidence            9999999887553             1345578999999999999998 5899999999999999999999999999999


Q ss_pred             hhcC
Q 048705          481 FKAY  484 (487)
Q Consensus       481 l~~~  484 (487)
                      |++.
T Consensus       440 l~~~  443 (460)
T d1tf4a1         440 LVEE  443 (460)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9754
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure