Citrus Sinensis ID: 048796
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 555 | 2.2.26 [Sep-21-2011] | |||||||
| Q0WR59 | 1048 | Probable inactive recepto | yes | no | 0.980 | 0.519 | 0.654 | 0.0 | |
| C0LGQ9 | 1037 | Probable LRR receptor-lik | no | no | 0.899 | 0.481 | 0.416 | 2e-99 | |
| Q94C77 | 757 | Receptor protein kinase-l | no | no | 0.787 | 0.577 | 0.277 | 5e-33 | |
| Q42371 | 976 | LRR receptor-like serine/ | no | no | 0.536 | 0.305 | 0.322 | 4e-32 | |
| Q6XAT2 | 967 | LRR receptor-like serine/ | no | no | 0.434 | 0.249 | 0.377 | 6e-32 | |
| C0LGW6 | 966 | LRR receptor-like serine/ | no | no | 0.434 | 0.249 | 0.377 | 5e-31 | |
| Q8VZG8 | 1045 | Probable LRR receptor-lik | no | no | 0.574 | 0.305 | 0.333 | 4e-30 | |
| Q9FL51 | 872 | Probably inactive leucine | no | no | 0.551 | 0.350 | 0.335 | 1e-29 | |
| C0LGV1 | 1135 | LRR receptor-like serine/ | no | no | 0.535 | 0.261 | 0.334 | 4e-29 | |
| Q8LPB4 | 1021 | Phytosulfokine receptor 1 | N/A | no | 0.529 | 0.287 | 0.340 | 6e-29 |
| >sp|Q0WR59|Y5020_ARATH Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana GN=At5g10020 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/556 (65%), Positives = 437/556 (78%), Gaps = 12/556 (2%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDL 60
SI INS+TL++LNLSSN LSG LP+S KSC ++DLS N SGD+S +Q WEA ++LDL
Sbjct: 312 SISEINSSTLTMLNLSSNGLSGDLPSSFKSCSVIDLSGNTFSGDVSVVQKWEATPDVLDL 371
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
SSN LSGSLPN TS F RLS +IRNNSV+G+LPSL S + +D+SSN+ G IP +
Sbjct: 372 SSNNLSGSLPNFTSAFSRLSVLSIRNNSVSGSLPSLWGDS-QFSVIDLSSNKFSGFIPVS 430
Query: 121 FFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN 180
FF+ +L +LNLS N G IP R S ASELLVL SYP ME LDLS N+LTG+LP DIG
Sbjct: 431 FFTFASLRSLNLSRNNLEGPIPFRGSRASELLVLNSYPQMELLDLSTNSLTGMLPGDIGT 490
Query: 181 MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDL 240
M ++++LNLANN LSG++PS+L+KL L +LDLS N FKG+IP+KL ++ FNVSYNDL
Sbjct: 491 MEKIKVLNLANNKLSGELPSDLNKLSGLLFLDLSNNTFKGQIPNKLPSQMVGFNVSYNDL 550
Query: 241 SGPIPENLRNFPKSSFHPGNALLIFPDGVPSSATNSQGQNSARGKHHSSKSSIRVAIIVA 300
SG IPE+LR++P SSF+PGN+ L P +P+ +S G S GK H SK SIR+AIIVA
Sbjct: 551 SGIIPEDLRSYPPSSFYPGNSKLSLPGRIPA---DSSGDLSLPGKKHHSKLSIRIAIIVA 607
Query: 301 SVGAAVMIVFVLLAYHRAQLKEFHGRTKFSGQTTGRDVKEGRFQRPSLFNFNSNVQRPPN 360
SVGAA+MI+FVL AYHR QLK+FHGR +F+ Q T RD K GR RPSLFNF+SNV++ +
Sbjct: 608 SVGAAIMILFVLFAYHRTQLKDFHGRNRFTDQATTRDTKFGRSSRPSLFNFSSNVEQQSS 667
Query: 361 SSSFSNDHLLTSNSRSLSGQAEFITEIIERTEGGAPSSASMNPNLLDNHPATSGRKSSPG 420
S SFSNDHLLT+NSRSLSG EI +E GAP++++ NLLD++PA SGRKSS G
Sbjct: 668 SLSFSNDHLLTANSRSLSGIPGCEAEI---SEQGAPATSAPT-NLLDDYPAASGRKSSSG 723
Query: 421 SPLSSSP-RFIEVCEQPVRLDVYSPDRLAGELFFLDASLAFTAEELSRAPAEVLGRSSHG 479
SS RF +QPV LDVYSPDRLAGELFFLD SL TAEELSRAPAEVLGRSSHG
Sbjct: 724 GSPLSSSPRF---SDQPVMLDVYSPDRLAGELFFLDVSLKLTAEELSRAPAEVLGRSSHG 780
Query: 480 TLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERL 539
TLYKATLD+GHMLTVKWLRVGLVRHKK+FA+E KKIGS++HPNIVPLRAYYWGPREQERL
Sbjct: 781 TLYKATLDNGHMLTVKWLRVGLVRHKKDFAREAKKIGSLKHPNIVPLRAYYWGPREQERL 840
Query: 540 LLADYIQGDSLALHLY 555
LL+DY++G+SLA+HLY
Sbjct: 841 LLSDYLRGESLAMHLY 856
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|C0LGQ9|Y4294_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g20940 OS=Arabidopsis thaliana GN=At4g20940 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 363 bits (932), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 234/562 (41%), Positives = 314/562 (55%), Gaps = 63/562 (11%)
Query: 2 IHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLS 61
+ I STTL L+LSSNSL+G LP CV+LDLS N G+++ WE N+E LDLS
Sbjct: 336 VSSIMSTTLHTLDLSSNSLTGELPLLTGGCVLLDLSNNQFEGNLTRWSKWE-NIEYLDLS 394
Query: 62 SNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEIS-PRLVTLDVSSNQLKGPIPDN 120
N +GS P+ T Q R + N+ N +TG+LP + P+L LD+SSN L+GPIP
Sbjct: 395 QNHFTGSFPDATPQLLRANHLNLSYNKLTGSLPERIPTHYPKLRVLDISSNSLEGPIPGA 454
Query: 121 FFSSMALTNLNLSGNGFSGAI-PLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIG 179
S L ++L NG +G I PL SS + + LDLS N G LP G
Sbjct: 455 LLSMPTLEEIHLQNNGMTGNIGPLPSSGSR----------IRLLDLSHNRFDGDLPGVFG 504
Query: 180 NMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYND 239
++ L++LNLA N+LSG +PS ++ + +L LD+S N F G +P LS + FNVSYND
Sbjct: 505 SLTNLQVLNLAANNLSGSLPSSMNDIVSLSSLDVSQNHFTGPLPSNLSSNIMAFNVSYND 564
Query: 240 LSGPIPENLRNFPKSSFHPGNALLIFPDGVPSSATNSQGQNSARGKHHSSKSSIRVAIIV 299
LSG +PENL+NFP SF+PGN+ L+ P G P S+ S K+ S+ ++V IIV
Sbjct: 565 LSGTVPENLKNFPPPSFYPGNSKLVLPAGSPGSSA------SEASKNKSTNKLVKVVIIV 618
Query: 300 AS------VGAAVMIVFVLLAYHRAQLKEFHGRTKFSGQTTGRDVKEGRFQRPSLFNFNS 353
+ + +++F + R + + G+ N
Sbjct: 619 SCAVALIILILVAILLFCICKSRRREERSITGKET-----------------------NR 655
Query: 354 NVQRPPNSSSFSNDHLLTSNSRSLSGQAEFITEIIERTEGGAPSSASMNPNLLDNHPATS 413
Q P S S ++ S ++ + +EI+ E A ++ +P+ TS
Sbjct: 656 RAQTIP---SGSGGGMVVSAEDLVASRKGSSSEILSPDEKLAVATG-FSPS------KTS 705
Query: 414 GRKSSPGSPLSSSPRFIEVCEQPVRLDVYSPDRLAGELFFLDASLAFTAEELSRAPAEVL 473
SPGS S +Q RLDV SPDRL GEL FLD S+ T EELSRAPAEVL
Sbjct: 706 NLSWSPGSGDS-----FPADQQLARLDVRSPDRLVGELHFLDDSIKLTPEELSRAPAEVL 760
Query: 474 GRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP 533
GRSSHGT Y+ATLD+G LTVKWLR G+ + +KEFAKEVKK ++RHPN+V LR YYWGP
Sbjct: 761 GRSSHGTSYRATLDNGVFLTVKWLREGVAKQRKEFAKEVKKFSNIRHPNVVTLRGYYWGP 820
Query: 534 REQERLLLADYIQGDSLALHLY 555
+ E+L+L+DYI SLA LY
Sbjct: 821 TQHEKLILSDYISPGSLASFLY 842
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q94C77|RPKL_ARATH Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 141/509 (27%), Positives = 218/509 (42%), Gaps = 72/509 (14%)
Query: 55 LEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLK 114
L ILDLSSN +GSLP+ L + ++ +N+++G LP + L L++S+N
Sbjct: 105 LRILDLSSNFFNGSLPDSVFNATELQSISLGSNNLSGDLPKSVNSVTNLQLLNLSANAFT 164
Query: 115 GPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVL 174
G IP N LT ++LS N FSG IP + + LDLS N L G L
Sbjct: 165 GEIPLNISLLKNLTVVSLSKNTFSGDIP------------SGFEAAQILDLSSNLLNGSL 212
Query: 175 PSDIGNMGRLRLLNLANNHLSGKM-PSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEF 233
P D+G L LNL++N + G++ P+ K A +DLS N G IP LSL LN+
Sbjct: 213 PKDLGGKS-LHYLNLSHNKVLGEISPNFAEKFPANATVDLSFNNLTGPIPSSLSL-LNQK 270
Query: 234 NVSY---NDLSGP-------IPENLRNFPKSSFHPGNALLIFPDGVPSSATNSQGQNSAR 283
S+ +L G IP L N P S A+ + P ++ N
Sbjct: 271 AESFSGNQELCGKPLKILCSIPSTLSNPPNISETTSPAIAVKPRSTAPINPLTEKPNQT- 329
Query: 284 GKHHSSKSSIRVAIIVASVGAAVMIVFVLLAYHRAQLKEFHGRTKFSGQTTGRDVKEGRF 343
GK S+I + VG A + + VL Y + + + +KFS + E +
Sbjct: 330 GKSKLKPSTIAAITVADIVGLAFIGLLVLYVYQVRKRRRYPESSKFSFFKFCLEKNEAKK 389
Query: 344 QRPSLFNFNSNVQRPPNSSSFSNDHLLTSNSRSLSGQAEFITEIIERTEGGAPSSASMNP 403
+PS + V P + +++ G +T GG S +
Sbjct: 390 SKPS----TTEVTVPE-----------SPEAKTTCGSCIILT-------GGRYDETSTSE 427
Query: 404 NLLDNHPATSGRKSSPGSPLSSSPRFIEVCEQPVRLDVYSPDRLAGELFFLDASLAFTAE 463
+ ++N + G L S + +L +D +
Sbjct: 428 SDVENQQTVQAFTRTDGGQLKQSSQ--------------------TQLVTVDGETRLDLD 467
Query: 464 ELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRV--GLVRHKKEFAKEVKKIGSMRHP 521
L +A A +LG + G +YKA L++G V+ + KEF +EV+ I +RHP
Sbjct: 468 TLLKASAYILGTTGTGIVYKAVLENGTAFAVRRIETESCAAAKPKEFEREVRAIAKLRHP 527
Query: 522 NIVPLRAYYWGPREQERLLLADYIQGDSL 550
N+V +R + WG + E+LL++DY+ SL
Sbjct: 528 NLVRIRGFCWG--DDEKLLISDYVPNGSL 554
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q42371|ERECT_ARATH LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 177/353 (50%), Gaps = 55/353 (15%)
Query: 10 LSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
++ L+L N LSG +P+ +++ +LDLS N++SG I + E L L SNKL+
Sbjct: 261 VATLSLQGNQLSGKIPSVIGLMQALAVLDLSGNLLSGSIPPILGNLTFTEKLYLHSNKLT 320
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA 126
GS+P +L + +N +TG +P L L L+V++N L+GPIPD+ S
Sbjct: 321 GSIPPELGNMSKLHYLELNDNHLTGHIPPELGKLTDLFDLNVANNDLEGPIPDHLSSCTN 380
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELLV----------------LPSYPPMESLDLSGNAL 170
L +LN+ GN FSG IP R+ E + L +++LDLS N +
Sbjct: 381 LNSLNVHGNKFSGTIP-RAFQKLESMTYLNLSSNNIKGPIPVELSRIGNLDTLDLSNNKI 439
Query: 171 TGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKL---- 226
G++PS +G++ L +NL+ NH++G +P + L ++ +DLS N G IP++L
Sbjct: 440 NGIIPSSLGDLEHLLKMNLSRNHITGVVPGDFGNLRSIMEIDLSNNDISGPIPEELNQLQ 499
Query: 227 ---------------------SLKLNEFNVSYNDLSGPIPENLRNFPKSSFHPGNALLIF 265
L L NVS+N+L G IP+N NF S F P + I
Sbjct: 500 NIILLRLENNNLTGNVGSLANCLSLTVLNVSHNNLVGDIPKN-NNF--SRFSPDS--FIG 554
Query: 266 PDGVPSSATNSQGQNSARGKHHSSKSSI-RVAIIVASVGAAVMIVFVLLAYHR 317
G+ S NS +S R + + SI R AI+ ++G V+++ VL+A R
Sbjct: 555 NPGLCGSWLNSPCHDSRR----TVRVSISRAAILGIAIGGLVILLMVLIAACR 603
|
Receptor kinase that, together with ERL1 and ERL2, regulates aerial architecture, including inflorescence (e.g. shoot apical meristem-originating organ shape, elongation of the internode and pedicels, and adaxial-abaxial polarity), and stomatal patterning (e.g. density and clustering), probably by tuning cell division and expansion. Modulates plant transpiration efficiency by controlling stomatal density, leaf photosynthetic capacity, epidermal cell expansion, mesophyll cell proliferation and cell-cell contact. Probable major trait regulating canalization (maintenance of phenotype despite varying environment) in many aspect of the plant physiology (e.g. plant morphology, light-dependent leaves number, branch number, flowering time, phytate and mineral concentrations) by transducing microenvironmental variation into phenotypic differentiation (ecological amplifier). May maintain development integrity in heat stress conditions. Regulates cell wall composition and structure. Confers resistance to the pathogenic bacteria Ralstonia solanacearum and to the necrotrophic fungi Plectosphaerella cucumerina and Pythium irregulare, and required for callose deposition upon infection. Resistance to P.cucumerina seems cell wall-mediated. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q6XAT2|ERL2_ARATH LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 133/262 (50%), Gaps = 21/262 (8%)
Query: 10 LSVLNLSSNSLSGTLPTSLKSC---VILDLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
L LNL +N L+G +P +L LDL+RN ++G+I + W L+ L L N L+
Sbjct: 147 LEFLNLKNNQLTGPIPATLTQIPNLKTLDLARNQLTGEIPRLLYWNEVLQYLGLRGNMLT 206
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA 126
G+L Q L F++R N++TGT+P + LDVS NQ+ G IP N +
Sbjct: 207 GTLSPDMCQLTGLWYFDVRGNNLTGTIPESIGNCTSFEILDVSYNQITGVIPYN-IGFLQ 265
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELLVLP--------SYPPM-------ESLDLSGNALT 171
+ L+L GN +G IP L VL PP+ L L GN LT
Sbjct: 266 VATLSLQGNKLTGRIPEVIGLMQALAVLDLSDNELTGPIPPILGNLSFTGKLYLHGNKLT 325
Query: 172 GVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LK 229
G +P ++GNM RL L L +N L GK+P EL KL L L+L+ N G IP +S
Sbjct: 326 GQIPPELGNMSRLSYLQLNDNELVGKIPPELGKLEQLFELNLANNNLVGLIPSNISSCAA 385
Query: 230 LNEFNVSYNDLSGPIPENLRNF 251
LN+FNV N LSG +P RN
Sbjct: 386 LNQFNVHGNFLSGAVPLEFRNL 407
|
Receptor kinase that regulates inflorescence architecture and organ shape as well as stomatal patterning, including density and clustering, together with ERL1 and ER. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGW6|ERL1_ARATH LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 135/262 (51%), Gaps = 21/262 (8%)
Query: 10 LSVLNLSSNSLSGTLPTSLKSC---VILDLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
L LNL +N L+G +P +L LDL+ N ++G+IS + W L+ L L N L+
Sbjct: 145 LETLNLKNNQLTGPVPATLTQIPNLKRLDLAGNHLTGEISRLLYWNEVLQYLGLRGNMLT 204
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA 126
G+L + Q L F++R N++TGT+P + LD+S NQ+ G IP N +
Sbjct: 205 GTLSSDMCQLTGLWYFDVRGNNLTGTIPESIGNCTSFQILDISYNQITGEIPYN-IGFLQ 263
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELLVLP--------SYPPM-------ESLDLSGNALT 171
+ L+L GN +G IP L VL PP+ L L GN LT
Sbjct: 264 VATLSLQGNRLTGRIPEVIGLMQALAVLDLSDNELVGPIPPILGNLSFTGKLYLHGNMLT 323
Query: 172 GVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LK 229
G +PS++GNM RL L L +N L G +P EL KL L L+L+ N+ G IP +S
Sbjct: 324 GPIPSELGNMSRLSYLQLNDNKLVGTIPPELGKLEQLFELNLANNRLVGPIPSNISSCAA 383
Query: 230 LNEFNVSYNDLSGPIPENLRNF 251
LN+FNV N LSG IP RN
Sbjct: 384 LNQFNVHGNLLSGSIPLAFRNL 405
|
Receptor kinase that regulates inflorescence architecture and organ shape as well as stomatal patterning, including density and clustering, together with ER and ERL2. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8VZG8|Y4885_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/351 (33%), Positives = 169/351 (48%), Gaps = 32/351 (9%)
Query: 10 LSVLNLSSNSLSGTLPTSLKSCVILDLSR---NMISGDISDMQNWEANLEILDLSSNKLS 66
L L L N G +P SL+ C L R N SGDIS+ L +DLS+N
Sbjct: 408 LENLTLDDNHFEGPVPKSLRDCKSLIRVRFKGNSFSGDISEAFGVYPTLNFIDLSNNNFH 467
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA 126
G L Q +L F + NNS+TG +P + +L LD+SSN++ G +P++ +
Sbjct: 468 GQLSANWEQSQKLVAFILSNNSITGAIPPEIWNMTQLSQLDLSSNRITGELPESISNINR 527
Query: 127 LTNLNLSGNGFSGAIP--LRSSHASELLVLPS-------------YPPMESLDLSGNALT 171
++ L L+GN SG IP +R E L L S P + ++LS N L
Sbjct: 528 ISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSNRFSSEIPPTLNNLPRLYYMNLSRNDLD 587
Query: 172 GVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPD--KLSLK 229
+P + + +L++L+L+ N L G++ S+ L LE LDLS N G+IP K L
Sbjct: 588 QTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQNLERLDLSHNNLSGQIPPSFKDMLA 647
Query: 230 LNEFNVSYNDLSGPIPEN--LRNFPKSSFHPGNALLI----FPDGV-PSSATNSQGQNSA 282
L +VS+N+L GPIP+N RN P +F GN L G+ P S T+S+ +
Sbjct: 648 LTHVDVSHNNLQGPIPDNAAFRNAPPDAFE-GNKDLCGSVNTTQGLKPCSITSSKKSHKD 706
Query: 283 RGKHHSSKSSIRVAIIVASVGAAVMIVFVLLAYHRAQLKEFHGRTKFSGQT 333
R I AII+ SV A + I F R + E H ++ G+T
Sbjct: 707 RNLIIYILVPIIGAIIILSVCAGIFICF----RKRTKQIEEHTDSESGGET 753
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FL51|Y5694_ARATH Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 168/334 (50%), Gaps = 28/334 (8%)
Query: 8 TTLSVLNLSSNSLSGTLPTSL----KSCVILDLSRNMISGDISDMQNWEANLEILDLSSN 63
T+L L+LS N+LSG +P SL K+ V LD+S+N +SG L L L SN
Sbjct: 244 TSLRTLDLSLNNLSGEIPRSLGPSLKNLVSLDVSQNKLSGSFPSGICSGKRLINLSLHSN 303
Query: 64 KLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFS 123
GSLPN + L ++NN +G P +L PR+ + +N+ G +P++
Sbjct: 304 FFEGSLPNSIGECLSLERLQVQNNGFSGEFPVVLWKLPRIKIIRADNNRFTGQVPESVSL 363
Query: 124 SMALTNLNLSGNGFSGAIP--------LRSSHASELLVLPSYPP-------MESLDLSGN 168
+ AL + + N FSG IP L AS+ PP + +++S N
Sbjct: 364 ASALEQVEIVNNSFSGEIPHGLGLVKSLYKFSASQNRFSGELPPNFCDSPVLSIVNISHN 423
Query: 169 ALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKL-S 227
L G +P ++ N +L L+LA N +G++P L+ L L YLDLS N G IP L +
Sbjct: 424 RLLGKIP-ELKNCKKLVSLSLAGNAFTGEIPPSLADLHVLTYLDLSDNSLTGLIPQGLQN 482
Query: 228 LKLNEFNVSYNDLSGPIPENLRNFPKSSFHPGNALLIFPDGVPSSATNSQGQNSARGKHH 287
LKL FNVS+N LSG +P +L + +SF GN L P G+P+S ++ + +G
Sbjct: 483 LKLALFNVSFNGLSGEVPHSLVSGLPASFLQGNPELCGP-GLPNSCSSDRSNFHKKGGKA 541
Query: 288 SSKSSIRVAIIVASVGAAVMIVFVLLAYHRAQLK 321
S I +A+ +A+ A VL Y R +++
Sbjct: 542 LVLSLICLALAIATFLA------VLYRYSRKKVQ 569
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|C0LGV1|RCH1_ARATH LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 161/317 (50%), Gaps = 20/317 (6%)
Query: 10 LSVLNLSSNSLSGTLPTSLKSC---VILDLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
L+ L L SN++SG +P + +C V L L N I+G+I + NL LDLS N LS
Sbjct: 445 LTKLLLISNAISGVIPLEIGNCTSLVRLRLVNNRITGEIPKGIGFLQNLSFLDLSENNLS 504
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA 126
G +P S +L N+ NN++ G LP L +L LDVSSN L G IPD+ ++
Sbjct: 505 GPVPLEISNCRQLQMLNLSNNTLQGYLPLSLSSLTKLQVLDVSSNDLTGKIPDSLGHLIS 564
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRL 186
L L LS N F+G IP H + L + LDLS N ++G +P ++ ++ L +
Sbjct: 565 LNRLILSKNSFNGEIPSSLGHCTNL---------QLLDLSSNNISGTIPEELFDIQDLDI 615
Query: 187 -LNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLK-LNEFNVSYNDLSGPI 244
LNL+ N L G +P +S L L LD+S N G++ L+ L N+S+N SG +
Sbjct: 616 ALNLSWNSLDGFIPERISALNRLSVLDISHNMLSGDLSALSGLENLVSLNISHNRFSGYL 675
Query: 245 PEN--LRNFPKSSFHPGNALLIFPDGVPSSATNSQGQNSARGKHHSSKSSIRVAIIVASV 302
P++ R + N L G S ++ Q + + HS + I + ++++
Sbjct: 676 PDSKVFRQLIGAEMEGNNGLC--SKGFRSCFVSNSSQLTTQRGVHSHRLRIAIGLLISV- 732
Query: 303 GAAVMIVFVLLAYHRAQ 319
AV+ V +LA RA+
Sbjct: 733 -TAVLAVLGVLAVIRAK 748
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8LPB4|PSKR1_DAUCA Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 178/367 (48%), Gaps = 73/367 (19%)
Query: 8 TTLSVLNLSSNSLSGTLPTSLKSCV---ILDLSRNMISGDISD-MQNWEA---------- 53
T L+ L+L+SNS SG++P++L +C+ ++ ++ I + +N+++
Sbjct: 326 TNLTSLDLASNSFSGSIPSNLPNCLRLKTINFAKIKFIAQIPESFKNFQSLTSLSFSNSS 385
Query: 54 ---------------NLEILDLSSNKLSGSLPNLTS-QFDRLSTFNIRNNSVTGTLPSLL 97
NL+ L L+ N LP++ S QF L I + + GT+P L
Sbjct: 386 IQNISSALEILQHCQNLKTLVLTLNFQKEELPSVPSLQFKNLKVLIIASCQLRGTVPQWL 445
Query: 98 EISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIP-----LRSSHASELL 152
SP L LD+S NQL G IP S +L L+LS N F G IP L+S + E
Sbjct: 446 SNSPSLQLLDLSWNQLSGTIPPWLGSLNSLFYLDLSNNTFIGEIPHSLTSLQSLVSKENA 505
Query: 153 V------LP------------------SYPPMESLDLSGNALTGVLPSDIGNMGRLRLLN 188
V P S+PPM +DLS N+L G + + G++ +L +LN
Sbjct: 506 VEEPSPDFPFFKKKNTNAGGLQYNQPSSFPPM--IDLSYNSLNGSIWPEFGDLRQLHVLN 563
Query: 189 LANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPD---KLSLKLNEFNVSYNDLSGPIP 245
L NN+LSG +P+ LS + +LE LDLS N G IP KLS L+ F+V+YN LSGPIP
Sbjct: 564 LKNNNLSGNIPANLSGMTSLEVLDLSHNNLSGNIPPSLVKLSF-LSTFSVAYNKLSGPIP 622
Query: 246 E--NLRNFPKSSFHPGNALLIFPDGVPSSATNSQGQNSARGKHHSSKSSIRVAIIVASVG 303
+ FP SSF GN L P T+ S G SK +IR I+ +VG
Sbjct: 623 TGVQFQTFPNSSFE-GNQGLCGEHASPCHITD----QSPHGSAVKSKKNIR-KIVAVAVG 676
Query: 304 AAVMIVF 310
+ VF
Sbjct: 677 TGLGTVF 683
|
Phytosulfokine receptor with a serine/threonine-protein kinase activity. Regulates, in response to phytosulfokine binding, a signaling cascade involved in plant cell differentiation, organogenesis and somatic embryogenesis. Daucus carota (taxid: 4039) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 555 | ||||||
| 225438587 | 1065 | PREDICTED: probable inactive receptor ki | 0.996 | 0.519 | 0.742 | 0.0 | |
| 255582512 | 1068 | receptor protein kinase, putative [Ricin | 0.992 | 0.515 | 0.695 | 0.0 | |
| 224083779 | 1053 | predicted protein [Populus trichocarpa] | 0.987 | 0.520 | 0.690 | 0.0 | |
| 17978960 | 1048 | AT5g10020/T31P16_9 [Arabidopsis thaliana | 0.980 | 0.519 | 0.658 | 0.0 | |
| 217426815 | 1052 | AT5G10020-like protein [Arabidopsis aren | 0.983 | 0.519 | 0.662 | 0.0 | |
| 297807033 | 1051 | hypothetical protein ARALYDRAFT_487827 [ | 0.983 | 0.519 | 0.658 | 0.0 | |
| 224096276 | 1056 | predicted protein [Populus trichocarpa] | 0.989 | 0.519 | 0.695 | 0.0 | |
| 356509056 | 991 | PREDICTED: probable inactive receptor ki | 0.953 | 0.533 | 0.687 | 0.0 | |
| 356509054 | 1039 | PREDICTED: probable inactive receptor ki | 0.953 | 0.509 | 0.687 | 0.0 | |
| 356518714 | 1039 | PREDICTED: probable inactive receptor ki | 0.954 | 0.510 | 0.683 | 0.0 |
| >gi|225438587|ref|XP_002276354.1| PREDICTED: probable inactive receptor kinase At5g10020 [Vitis vinifera] gi|296082489|emb|CBI21494.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/556 (74%), Positives = 467/556 (83%), Gaps = 3/556 (0%)
Query: 2 IHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLS 61
I INS+ L++LNLSSN LSG+LP+SL+ C+ +DLSRNMISGDIS MQ+WEA LE+LDLS
Sbjct: 319 IDEINSSNLNILNLSSNGLSGSLPSSLRRCLTVDLSRNMISGDISIMQSWEATLEVLDLS 378
Query: 62 SNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNF 121
SNKL+GS PNLTSQF+RL+T + NNS+ G LPS L RL +D+SSN L GPIP +F
Sbjct: 379 SNKLTGSFPNLTSQFERLTTLKLGNNSLVGILPSGLGAYSRLSAVDLSSNNLNGPIPSSF 438
Query: 122 FSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNM 181
F+S LT+LNLSGN F G+IP + SH SELLVLPSY P+ESLDLS N LTG LPSDIGNM
Sbjct: 439 FTSTTLTSLNLSGNNFVGSIPFQGSHESELLVLPSYLPLESLDLSRNFLTGNLPSDIGNM 498
Query: 182 GRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLS 241
GRL+LLNLA N LSG++P+E+SKL LEYLDLS N F+GEIPDK+ + FNVS+NDLS
Sbjct: 499 GRLKLLNLAKNSLSGELPNEISKLSDLEYLDLSSNNFRGEIPDKIPSSVKVFNVSHNDLS 558
Query: 242 GPIPENLRNFPKSSFHPGNALLIFPDGVPSSATNSQGQNSARGKHHSSKSSIRVAIIVAS 301
G +PENLR FP +SF PGN LLI P+G+P+ T G G HHSSK+SIRVAIIVAS
Sbjct: 559 GHVPENLRRFPMTSFRPGNELLILPEGMPAENT-IPGPIHDSGNHHSSKASIRVAIIVAS 617
Query: 302 VGAAVMIVFVLLAYHRAQLKEFHGRTKFSGQTTGRDVKEGRFQRPSLFNFNSNVQRPPNS 361
VGAAVMI FVLLAY+RAQL++FHGR+ FSGQT+ RDVK GRF RPSLF F++N + P S
Sbjct: 618 VGAAVMIAFVLLAYYRAQLQDFHGRSGFSGQTSERDVKLGRFTRPSLFKFHTNDEPPATS 677
Query: 362 SSFSNDHLLTSNSRSLSGQAEFITEIIER--TEGGAPSSASMNPNLLDNHPATSGRKSSP 419
SFSNDHLLTSNSRSLSGQ E +TEIIE G + SSAS NPN+LDNHP TSGRKSSP
Sbjct: 678 LSFSNDHLLTSNSRSLSGQTEHVTEIIEHPLPGGASASSASTNPNVLDNHPTTSGRKSSP 737
Query: 420 GSPLSSSPRFIEVCEQPVRLDVYSPDRLAGELFFLDASLAFTAEELSRAPAEVLGRSSHG 479
GSPLSSSPRFIE EQ VRLDVYSPDRLAGELFFLD SLAFTAEELSRAPAEVLGRSSHG
Sbjct: 738 GSPLSSSPRFIEATEQHVRLDVYSPDRLAGELFFLDGSLAFTAEELSRAPAEVLGRSSHG 797
Query: 480 TLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERL 539
TLYKATLDSGHMLTVKWLRVGLV+HKKEFAKEVK+IGS+RHPN+VPLRAYYWGPREQERL
Sbjct: 798 TLYKATLDSGHMLTVKWLRVGLVKHKKEFAKEVKRIGSIRHPNVVPLRAYYWGPREQERL 857
Query: 540 LLADYIQGDSLALHLY 555
+LADYIQGDSLALHLY
Sbjct: 858 VLADYIQGDSLALHLY 873
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255582512|ref|XP_002532041.1| receptor protein kinase, putative [Ricinus communis] gi|223528284|gb|EEF30331.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/558 (69%), Positives = 442/558 (79%), Gaps = 7/558 (1%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDL 60
SIHGINSTTL+ L LSSN +SG+LP LK C ++DLSRNMIS D+S MQNWEA++EILDL
Sbjct: 323 SIHGINSTTLNTLILSSNGISGSLPAFLKRCTVIDLSRNMISSDLSVMQNWEASIEILDL 382
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
SSN LSGSLPNL SQF RLS ++RNNS+ G LP S L +D+S NQL G IP
Sbjct: 383 SSNMLSGSLPNLASQFPRLSKLSLRNNSLEGNLPPQWGASSGLSAIDLSLNQLSGTIPSG 442
Query: 121 FFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN 180
FF+SMALTNLNLS N F+G IPL+ SH ELLVLPSYP ++SLDLS N+L+G L SDIGN
Sbjct: 443 FFTSMALTNLNLSRNQFTGPIPLQGSHVGELLVLPSYPKIDSLDLSHNSLSGGLVSDIGN 502
Query: 181 MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDL 240
M L+LLNL+NN LSG++P ELSKL L+YLDLSGN+FKG+IPD+L L FNVSYNDL
Sbjct: 503 MASLKLLNLSNNDLSGELPIELSKLTYLQYLDLSGNKFKGKIPDQLPSSLIGFNVSYNDL 562
Query: 241 SGPIPENLRNFPKSSFHPGNALLIFPDGVPSSATNS-QGQNSARGKHHSSKSSIRVAIIV 299
SG +P+NLR F SSF PGN+LLIF +G S+TNS + +G+HH K + + II+
Sbjct: 563 SGVVPKNLRKFGISSFQPGNSLLIFLNG--GSSTNSVPDELPVQGRHHGPKHRVTIGIII 620
Query: 300 ASVGAAVMIVFVLLAYHRAQLKEFHGRTKFSGQTTGRDVKEGRFQRPSLFNFNSNVQRPP 359
+V ++VF LAYHRAQ K+FHGR+ FSGQTT K R SLF F SNV RPP
Sbjct: 621 GAVVTIAILVF--LAYHRAQQKDFHGRSDFSGQTTREHGKVEPSARSSLFKFQSNVHRPP 678
Query: 360 NSSSFSNDHLLTSNSRSLSGQAEFITEIIERT--EGGAPSSASMNPNLLDNHPATSGRKS 417
S SFSNDHLLT+NSRSLSGQ EF EI+E G A SSA N N+++N P TSGRKS
Sbjct: 679 TSLSFSNDHLLTTNSRSLSGQTEFGNEIVEHDLPGGVAVSSAPPNLNVIENCPTTSGRKS 738
Query: 418 SPGSPLSSSPRFIEVCEQPVRLDVYSPDRLAGELFFLDASLAFTAEELSRAPAEVLGRSS 477
SPGSPL+SSPRFIE EQ V+LDVYSPDRLAGELFFLDASLAFTAEELSRAPAEVLGRSS
Sbjct: 739 SPGSPLTSSPRFIEPREQCVKLDVYSPDRLAGELFFLDASLAFTAEELSRAPAEVLGRSS 798
Query: 478 HGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQE 537
HGTLYKATLD GHMLTVKWLRVGLV+HKKEFAKEVK+IGS+RHPNIVPLRAYYWGPREQE
Sbjct: 799 HGTLYKATLDGGHMLTVKWLRVGLVKHKKEFAKEVKRIGSVRHPNIVPLRAYYWGPREQE 858
Query: 538 RLLLADYIQGDSLALHLY 555
RLLLADYI GDSLALHLY
Sbjct: 859 RLLLADYIHGDSLALHLY 876
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224083779|ref|XP_002307121.1| predicted protein [Populus trichocarpa] gi|222856570|gb|EEE94117.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/556 (69%), Positives = 440/556 (79%), Gaps = 8/556 (1%)
Query: 2 IHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLS 61
I+ I+STTL+VLN+SSN L G LPT L+ C +LDLS NMI+GD+S MQNW A LE+LDLS
Sbjct: 312 INEIHSTTLNVLNVSSNGLKGHLPTFLQRCSVLDLSGNMITGDMSVMQNWGATLEVLDLS 371
Query: 62 SNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNF 121
SN+LS SLPNLT QF RL+ N+RNNS+ G LP L L ++D+S NQL GPIP +F
Sbjct: 372 SNQLSRSLPNLTPQFVRLTKLNLRNNSLKGNLPPQLWDISTLSSVDLSLNQLNGPIPGSF 431
Query: 122 FSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNM 181
F+S+ LTNLNLSGN FSG IP++ S A ELLVLPSYP MESLD+S N+L+G LPS IGN
Sbjct: 432 FTSLTLTNLNLSGNQFSGPIPVQGSGAGELLVLPSYPLMESLDVSQNSLSGPLPSGIGNF 491
Query: 182 GRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLS 241
L+ LNL++N+L+G++P ELSKL L+YLDLS N F+G+IPDKL L N+SYNDLS
Sbjct: 492 ANLKSLNLSHNNLTGQLPIELSKLTYLQYLDLSANNFQGKIPDKLPSSLIGLNMSYNDLS 551
Query: 242 GPIPENLRN-FPKSSFHPGNALLIFPD-GVPSSATNSQGQNSARGKHHSSKSSIRVAIIV 299
G IP+NLRN F +SF PGN LI P G PS TNS + + G H SK +I +AIIV
Sbjct: 552 GNIPQNLRNKFDITSFLPGNPSLIIPKAGGPS--TNSVPHHISGGGKHGSKRNITIAIIV 609
Query: 300 ASVGAAVMIVFVLLAYHRAQLKEFHGRTKFSGQTTGRDVKEGRFQRPSLFNFNSNVQRPP 359
A+VGAA M+ FVLLAY RAQ KEFHGR+ FSGQT D K GR R SLF F N RPP
Sbjct: 610 ATVGAAAMVAFVLLAYQRAQRKEFHGRSDFSGQTAMEDAKLGRSSRISLFKFQLNAHRPP 669
Query: 360 NSSSFSNDHLLTSNSRSLSGQAEFITEIIERTEGGAPSSASMNPNLLDNHPATSGRKSSP 419
S SFSN+HLLT+NSRSLSGQ E TEI+E + ++S PNLLD+HP TSGRKSSP
Sbjct: 670 TSLSFSNNHLLTANSRSLSGQTESATEIVEHSLYEGMMASSSIPNLLDDHPTTSGRKSSP 729
Query: 420 GSPLSSSPRFIEVCEQPVRLDVYSPDRLAGELFFLDASLAFTAEELSRAPAEVLGRSSHG 479
GSPLSSSPRF+E P +LDVYSPDRLAGEL FLD+SLAFTAEELSRAPAEVLGRSSHG
Sbjct: 730 GSPLSSSPRFVE----PAKLDVYSPDRLAGELSFLDSSLAFTAEELSRAPAEVLGRSSHG 785
Query: 480 TLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERL 539
TLYKATLDSGHMLTVKWLRVGLV+HKKEFAKEVKKIGS+RHPNIVPLRAYYWGPREQERL
Sbjct: 786 TLYKATLDSGHMLTVKWLRVGLVKHKKEFAKEVKKIGSIRHPNIVPLRAYYWGPREQERL 845
Query: 540 LLADYIQGDSLALHLY 555
LLADYIQGDSLALHLY
Sbjct: 846 LLADYIQGDSLALHLY 861
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|17978960|gb|AAL47484.1| AT5g10020/T31P16_9 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/556 (65%), Positives = 439/556 (78%), Gaps = 12/556 (2%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDL 60
SI INS+TL++LNLSSN LSG LP+S KSC ++DLS N SGD+S +Q WEA ++LDL
Sbjct: 312 SISEINSSTLTMLNLSSNGLSGDLPSSFKSCSVIDLSGNTFSGDVSVVQKWEATPDVLDL 371
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
SSN LSGSLPN TS F RLS +IRNNSV+G+LPSL S + +D+SSN+ G IP +
Sbjct: 372 SSNNLSGSLPNFTSAFSRLSVLSIRNNSVSGSLPSLWGDS-QFSVIDLSSNKFSGFIPVS 430
Query: 121 FFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN 180
FF+ +L +LNLS N G IP R S ASELLVL SYP ME LDLS N+LTG+LP DIG
Sbjct: 431 FFTFASLRSLNLSRNNLEGPIPFRGSRASELLVLNSYPQMELLDLSTNSLTGMLPGDIGT 490
Query: 181 MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDL 240
M ++++LNLANN LSG++PS+L+KL L +LDLS N FKG+IP+KL ++ FNVSYNDL
Sbjct: 491 MEKIKVLNLANNKLSGELPSDLNKLSGLLFLDLSNNTFKGQIPNKLPSQMVGFNVSYNDL 550
Query: 241 SGPIPENLRNFPKSSFHPGNALLIFPDGVPSSATNSQGQNSARGKHHSSKSSIRVAIIVA 300
SG IPE+LR++P SSF+PGN+ L P +P+ +S G S GK H SK SIR+AIIVA
Sbjct: 551 SGIIPEDLRSYPPSSFYPGNSKLSLPGRIPA---DSSGDLSLPGKKHHSKLSIRIAIIVA 607
Query: 301 SVGAAVMIVFVLLAYHRAQLKEFHGRTKFSGQTTGRDVKEGRFQRPSLFNFNSNVQRPPN 360
SVGAA+MI+FVL AYHR QLK+FHGR +F+ Q T RD K GR RPSLFNF+SNV++ +
Sbjct: 608 SVGAAIMILFVLFAYHRTQLKDFHGRNRFTDQATTRDTKFGRSSRPSLFNFSSNVEQQSS 667
Query: 361 SSSFSNDHLLTSNSRSLSGQAEFITEIIERTEGGAPSSASMNPNLLDNHPATSGRKS-SP 419
S SFSNDHLLT+NSRSLSG EI +E GAP++++ NLLD++PA SGRK S
Sbjct: 668 SLSFSNDHLLTANSRSLSGIPGCEAEI---SEQGAPATSAPT-NLLDDYPAASGRKCCSE 723
Query: 420 GSPLSSSPRFIEVCEQPVRLDVYSPDRLAGELFFLDASLAFTAEELSRAPAEVLGRSSHG 479
SPLSSSPRF +Q V LDVYSPDRLAGELFFLD SL TAEELSRAPAEVLGRSSHG
Sbjct: 724 DSPLSSSPRF---SDQHVMLDVYSPDRLAGELFFLDVSLKLTAEELSRAPAEVLGRSSHG 780
Query: 480 TLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERL 539
TLYKATLD+GHMLTVKWLRVGLVRHKK+FA+E KKIGS++HPNIVPLRAYYWGPREQERL
Sbjct: 781 TLYKATLDNGHMLTVKWLRVGLVRHKKDFAREAKKIGSLKHPNIVPLRAYYWGPREQERL 840
Query: 540 LLADYIQGDSLALHLY 555
LL+DY++G+SLA+HLY
Sbjct: 841 LLSDYLRGESLAMHLY 856
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|217426815|gb|ACK44523.1| AT5G10020-like protein [Arabidopsis arenosa] | Back alignment and taxonomy information |
|---|
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/560 (66%), Positives = 443/560 (79%), Gaps = 14/560 (2%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDL 60
SI INSTTL++LNLSSN LSG LP++LKSC+++DLS N SGD+S +Q WEA ++LDL
Sbjct: 310 SIIEINSTTLTMLNLSSNGLSGDLPSTLKSCLVIDLSGNTFSGDVSVVQKWEATPDVLDL 369
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEIS--PRLVTLDVSSNQLKGPIP 118
SSN LSGSLPN TS F RLS +IRNNSV G+LPSL + S +L +D+SSN+ G IP
Sbjct: 370 SSNNLSGSLPNFTSAFSRLSVLSIRNNSVAGSLPSLWDDSGVSQLSVIDLSSNKFSGSIP 429
Query: 119 DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDI 178
++FF+ +L +LNLS N G IP R S ASELLVL SYP ME LDLS N+LTG+LP DI
Sbjct: 430 ESFFTFASLRSLNLSMNNLEGPIPFRGSRASELLVLRSYPQMELLDLSTNSLTGMLPGDI 489
Query: 179 GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYN 238
G M ++R+LNLANN LSG++PS+L+KL L +LDLS N FKG+IP+KL ++ FNVSYN
Sbjct: 490 GTMEKIRVLNLANNKLSGELPSDLNKLSGLLFLDLSNNTFKGQIPNKLPSQMVGFNVSYN 549
Query: 239 DLSGPIPENLRNFPKSSFHPGNALLIFPDGVPSSATNSQGQNSARGKHHSSKSSIRVAII 298
DLSG IPENLR++P SSF+PGN+ LI P G+P+ ++ S GK H SK SIR+AII
Sbjct: 550 DLSGIIPENLRSYPPSSFYPGNSKLILPGGIPADSSRDL---SLPGKKHHSKLSIRIAII 606
Query: 299 VASVGAAVMIVFVLLAYHRAQLKEFHGRTKFSGQTTGRDVKEGRFQRPSLFNFNSNVQRP 358
VASVGAA+MI+FVL AYHR QLK+FHGR +F+ Q T RD K GR RPSLFNF+SN ++
Sbjct: 607 VASVGAALMILFVLFAYHRTQLKDFHGRNRFTDQATTRDAKCGRSSRPSLFNFSSNAEQQ 666
Query: 359 PNSSSFSNDHLLTSNSRSLSGQAEFITEIIERTEGGAP--SSASMNPNLLDNHPATSGRK 416
+S SFSNDHLLT+NSRSLSG F EI +E G P +SA+ NPNLLD++PA SGRK
Sbjct: 667 SSSLSFSNDHLLTANSRSLSGIPGFEAEI---SEQGVPATTSATTNPNLLDDYPAASGRK 723
Query: 417 SSPGSPLSSSP-RFIEVCEQPVRLDVYSPDRLAGELFFLDASLAFTAEELSRAPAEVLGR 475
SS G SS RF +QPV LDVYSPDRLAGELFFLD SL TAEELSRAPAEVLGR
Sbjct: 724 SSSGGSPLSSSPRF---SDQPVMLDVYSPDRLAGELFFLDVSLKLTAEELSRAPAEVLGR 780
Query: 476 SSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE 535
SSHGTLYKATLD+GHMLTVKWLRVGLVRHKK+FA+E KKIGS++HPNIVPLRAYYWGPRE
Sbjct: 781 SSHGTLYKATLDNGHMLTVKWLRVGLVRHKKDFAREAKKIGSLKHPNIVPLRAYYWGPRE 840
Query: 536 QERLLLADYIQGDSLALHLY 555
QERLLL+DY++G+SLA+HLY
Sbjct: 841 QERLLLSDYLRGESLAMHLY 860
|
Source: Arabidopsis arenosa Species: Arabidopsis arenosa Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297807033|ref|XP_002871400.1| hypothetical protein ARALYDRAFT_487827 [Arabidopsis lyrata subsp. lyrata] gi|297317237|gb|EFH47659.1| hypothetical protein ARALYDRAFT_487827 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/559 (65%), Positives = 441/559 (78%), Gaps = 13/559 (2%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDL 60
SI INSTTL++LNLSSN LSG LP++LKSC+++DLS N SGD+S +Q WEA ++LDL
Sbjct: 310 SISEINSTTLTMLNLSSNGLSGDLPSTLKSCLVIDLSGNTFSGDVSVVQKWEATPDVLDL 369
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEIS--PRLVTLDVSSNQLKGPIP 118
SSN LSGSLPN TS F RLS +IRNNSV+G+LPSL + S + +D SSN+ G IP
Sbjct: 370 SSNNLSGSLPNFTSAFSRLSVLSIRNNSVSGSLPSLWDDSGVSQFSVIDFSSNKFSGSIP 429
Query: 119 DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDI 178
++FF+ +L +LNLS N G IP R S ASELLVL SYP ME LDLS N+LTG++P DI
Sbjct: 430 ESFFTFASLRSLNLSMNNLEGPIPFRGSRASELLVLRSYPQMELLDLSTNSLTGMVPGDI 489
Query: 179 GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYN 238
G M ++R+LNLANN LSG++PS+L+KL L +LDLS N FKG+IP+KL ++ FNVSYN
Sbjct: 490 GTMEKIRVLNLANNKLSGELPSDLNKLSGLLFLDLSNNTFKGQIPNKLPSQMVGFNVSYN 549
Query: 239 DLSGPIPENLRNFPKSSFHPGNALLIFPDGVPSSATNSQGQNSARGKHHSSKSSIRVAII 298
DLSG IPENLR++P SSF+PGN+ L P G+P+ ++ S GK+H SK SIR+AII
Sbjct: 550 DLSGIIPENLRSYPPSSFYPGNSKLSLPGGIPADSSRDM---SLPGKNHHSKLSIRIAII 606
Query: 299 VASVGAAVMIVFVLLAYHRAQLKEFHGRTKFSGQTTGRDVKEGRFQRPSLFNFNSNVQRP 358
VASVGAA+MI+FVL AYHR QLK+FHGR +F+ Q T RD K GR RPSLFNF+SN ++
Sbjct: 607 VASVGAALMILFVLFAYHRTQLKDFHGRNRFTDQATTRDAKFGRSSRPSLFNFSSNAEQQ 666
Query: 359 PNSSSFSNDHLLTSNSRSLSGQAEFITEIIERTEGGAP-SSASMNPNLLDNHPATSGRKS 417
+S SFSNDHLLT+NSRSLSG F EI +E G P +SA NPNLLD++PA SGRKS
Sbjct: 667 SSSLSFSNDHLLTANSRSLSGIPGFEAEI---SEHGVPATSAPTNPNLLDDYPAASGRKS 723
Query: 418 SPGSPLSSSP-RFIEVCEQPVRLDVYSPDRLAGELFFLDASLAFTAEELSRAPAEVLGRS 476
S G SS RF +QPV LDVYSPDRLAGELFFLD SL TAEELSRAPAEVLGRS
Sbjct: 724 SSGGSPLSSSPRF---SDQPVMLDVYSPDRLAGELFFLDVSLKLTAEELSRAPAEVLGRS 780
Query: 477 SHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ 536
SHGTLYKATLD+GHMLTVKWLRVGLVRHKK+FA+E KKIGS++HPNIVPLRAYYWGPREQ
Sbjct: 781 SHGTLYKATLDNGHMLTVKWLRVGLVRHKKDFAREAKKIGSLKHPNIVPLRAYYWGPREQ 840
Query: 537 ERLLLADYIQGDSLALHLY 555
ERLLL+DY++G+SLA+HLY
Sbjct: 841 ERLLLSDYLRGESLAMHLY 859
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224096276|ref|XP_002310597.1| predicted protein [Populus trichocarpa] gi|222853500|gb|EEE91047.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/559 (69%), Positives = 449/559 (80%), Gaps = 10/559 (1%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDL 60
S+HG STTL++LNLSSN L+GTLPT L+ C ++DLS NMI+GD+S MQ W A++E+LDL
Sbjct: 312 SVHGTRSTTLNILNLSSNGLTGTLPTFLQRCSVVDLSGNMITGDLSVMQQWGASVEVLDL 371
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
SSN+LSGSLPNLT F RLS N+RNNS+ G LP+ L ++D+S NQ GPIP
Sbjct: 372 SSNQLSGSLPNLT-WFVRLSELNLRNNSLDGNLPAQLGDLSTSSSVDLSLNQFNGPIPGG 430
Query: 121 FFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN 180
FF+S+ L NLNLSGN FSG IP + S A ELLVLPSYP MESLDLS N+L+G+LPS IGN
Sbjct: 431 FFTSLTLMNLNLSGNRFSGPIPFQDSGAGELLVLPSYPLMESLDLSQNSLSGILPSGIGN 490
Query: 181 MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDL 240
LR LNL+NN+LSG++P +LSKL L+YLDLS N+F+G+IPDKL L N+S NDL
Sbjct: 491 FANLRSLNLSNNNLSGQLPIQLSKLTHLQYLDLSANRFQGKIPDKLPSSLIGLNMSNNDL 550
Query: 241 SGPIPENLRN-FPKSSFHPGNALLIFPD-GVPSSATNSQGQNSARGKHHSSKSSIRVAII 298
+G I NLRN F SSF PGN LLI P+ GV S + Q S GK+HSSK +I +A+I
Sbjct: 551 AGNISLNLRNKFDISSFRPGNPLLIIPNTGVEPSTNSVPDQISVHGKNHSSKRNITIAVI 610
Query: 299 VASVGAAVMIVFVLLAYHRAQLKEFHGRTKFSGQTTGRDVKEGRFQRPSLFNFNSNVQRP 358
VA+VG A MI FVLLAY RAQ KEFHGR+ FSGQTT D K+GR + SLFNF+SN RP
Sbjct: 611 VATVGTAAMIAFVLLAYQRAQRKEFHGRSDFSGQTTREDAKQGRSSQTSLFNFHSNAHRP 670
Query: 359 PNSSSFSNDHLLTSNSRSLSGQAEFITEIIERT--EGGAPSSASMNPNLLDNHPATSGRK 416
P S SFSNDHLLT+NSRSLSGQAEF TEI+E EG A SS+S+ PNLLD+HP +SG+K
Sbjct: 671 PTSLSFSNDHLLTANSRSLSGQAEFETEIVEHGLPEGMAASSSSI-PNLLDDHPTSSGKK 729
Query: 417 SSPGSPLSSSPRFIEVCEQPVRLDVYSPDRLAGELFFLDASLAFTAEELSRAPAEVLGRS 476
SSPGSPLSSSPRF+E P +LDVYSPDRLAGEL FLD+SLAFTAEELSRAPAEVLGRS
Sbjct: 730 SSPGSPLSSSPRFVE----PTKLDVYSPDRLAGELSFLDSSLAFTAEELSRAPAEVLGRS 785
Query: 477 SHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ 536
SHGTLYKATLDSGHMLTVKWLRVGLV+HKKEFAKEVKKIGS+RH NIVPLRA+YWGPREQ
Sbjct: 786 SHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAKEVKKIGSIRHQNIVPLRAFYWGPREQ 845
Query: 537 ERLLLADYIQGDSLALHLY 555
ERLLLADYIQGDSLALHLY
Sbjct: 846 ERLLLADYIQGDSLALHLY 864
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356509056|ref|XP_003523268.1| PREDICTED: probable inactive receptor kinase At5g10020-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/560 (68%), Positives = 445/560 (79%), Gaps = 31/560 (5%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDL 60
SI INSTTL+ LNLSSNSLSG+LPTSL+ C ++DLSRNM+SGDIS +QNWEA LE++DL
Sbjct: 266 SIGVINSTTLNFLNLSSNSLSGSLPTSLRRCTVIDLSRNMLSGDISVIQNWEAPLEVIDL 325
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
SSNKLSGSLP++ + +LS T+D+S N+LKG IP
Sbjct: 326 SSNKLSGSLPSILGTYSKLS------------------------TIDLSLNELKGSIPRG 361
Query: 121 FFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN 180
+S ++T LNLSGN F+G + L+ S ASELL++P Y PME LD+S N+L GVLPS+IG
Sbjct: 362 LVTSSSVTRLNLSGNQFTGPLLLQGSGASELLLMPPYQPMEYLDVSNNSLEGVLPSEIGR 421
Query: 181 MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDL 240
MG L+LLNLA N SG++P+EL+KL LEYLDLS N+F G IPDKL L FNVS NDL
Sbjct: 422 MGGLKLLNLARNGFSGQLPNELNKLFYLEYLDLSNNKFTGNIPDKLPSSLTAFNVSNNDL 481
Query: 241 SGPIPENLRNFPKSSFHPGNALLIFPDGVPSSATNSQGQN-SARGKHHSSKSSIRVAIIV 299
SG +PENLR+F SSFHPGNA L+ P+ P T+S N +G+HHSSK +IR+AII+
Sbjct: 482 SGRVPENLRHFSPSSFHPGNAKLMLPNDSPE--TSSVPDNIPDKGRHHSSKGNIRIAIIL 539
Query: 300 ASVGAAVMIVFVLLAYHRAQLKEFHGRTKFSGQTTGRDVKEGRFQRPSLFNFNSNVQRPP 359
ASVGAA+MI FVLL YHR QLKEFHGR++F+GQ T RDVK G R SLF FN+NVQ P
Sbjct: 540 ASVGAAIMIAFVLLVYHRTQLKEFHGRSEFTGQNTRRDVKLGGLSRSSLFKFNTNVQPPT 599
Query: 360 NSSSFSNDHLLTSNSRSLS-GQAEFITEIIER--TEGG-APSSASMNPNLLDNHPATSGR 415
+S SFSNDHLLTSNSRSLS GQ+EFITEI E T+G A SS S+NPNL+DN P +SGR
Sbjct: 600 SSLSFSNDHLLTSNSRSLSGGQSEFITEISEHGLTQGMVATSSVSVNPNLMDNPPTSSGR 659
Query: 416 KSSPGSPLSSSPRFIEVCEQPVRLDVYSPDRLAGELFFLDASLAFTAEELSRAPAEVLGR 475
KSSPGSPLSSSPRFIE CE+PV LDVYSPDRLAGELFFLD+SLAFTAEELSRAPAEVLGR
Sbjct: 660 KSSPGSPLSSSPRFIEACEKPVMLDVYSPDRLAGELFFLDSSLAFTAEELSRAPAEVLGR 719
Query: 476 SSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE 535
SSHGTLYKATLDSGHMLTVKWLRVGLV+HKKEFA+EVK+IGSMRHPNIVPL AYYWGPRE
Sbjct: 720 SSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVPLLAYYWGPRE 779
Query: 536 QERLLLADYIQGDSLALHLY 555
QERLLLADYI GD+LALHLY
Sbjct: 780 QERLLLADYIHGDNLALHLY 799
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356509054|ref|XP_003523267.1| PREDICTED: probable inactive receptor kinase At5g10020-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/560 (68%), Positives = 445/560 (79%), Gaps = 31/560 (5%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDL 60
SI INSTTL+ LNLSSNSLSG+LPTSL+ C ++DLSRNM+SGDIS +QNWEA LE++DL
Sbjct: 314 SIGVINSTTLNFLNLSSNSLSGSLPTSLRRCTVIDLSRNMLSGDISVIQNWEAPLEVIDL 373
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
SSNKLSGSLP++ + +LS T+D+S N+LKG IP
Sbjct: 374 SSNKLSGSLPSILGTYSKLS------------------------TIDLSLNELKGSIPRG 409
Query: 121 FFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN 180
+S ++T LNLSGN F+G + L+ S ASELL++P Y PME LD+S N+L GVLPS+IG
Sbjct: 410 LVTSSSVTRLNLSGNQFTGPLLLQGSGASELLLMPPYQPMEYLDVSNNSLEGVLPSEIGR 469
Query: 181 MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDL 240
MG L+LLNLA N SG++P+EL+KL LEYLDLS N+F G IPDKL L FNVS NDL
Sbjct: 470 MGGLKLLNLARNGFSGQLPNELNKLFYLEYLDLSNNKFTGNIPDKLPSSLTAFNVSNNDL 529
Query: 241 SGPIPENLRNFPKSSFHPGNALLIFPDGVPSSATNSQGQN-SARGKHHSSKSSIRVAIIV 299
SG +PENLR+F SSFHPGNA L+ P+ P T+S N +G+HHSSK +IR+AII+
Sbjct: 530 SGRVPENLRHFSPSSFHPGNAKLMLPNDSPE--TSSVPDNIPDKGRHHSSKGNIRIAIIL 587
Query: 300 ASVGAAVMIVFVLLAYHRAQLKEFHGRTKFSGQTTGRDVKEGRFQRPSLFNFNSNVQRPP 359
ASVGAA+MI FVLL YHR QLKEFHGR++F+GQ T RDVK G R SLF FN+NVQ P
Sbjct: 588 ASVGAAIMIAFVLLVYHRTQLKEFHGRSEFTGQNTRRDVKLGGLSRSSLFKFNTNVQPPT 647
Query: 360 NSSSFSNDHLLTSNSRSLS-GQAEFITEIIER--TEGG-APSSASMNPNLLDNHPATSGR 415
+S SFSNDHLLTSNSRSLS GQ+EFITEI E T+G A SS S+NPNL+DN P +SGR
Sbjct: 648 SSLSFSNDHLLTSNSRSLSGGQSEFITEISEHGLTQGMVATSSVSVNPNLMDNPPTSSGR 707
Query: 416 KSSPGSPLSSSPRFIEVCEQPVRLDVYSPDRLAGELFFLDASLAFTAEELSRAPAEVLGR 475
KSSPGSPLSSSPRFIE CE+PV LDVYSPDRLAGELFFLD+SLAFTAEELSRAPAEVLGR
Sbjct: 708 KSSPGSPLSSSPRFIEACEKPVMLDVYSPDRLAGELFFLDSSLAFTAEELSRAPAEVLGR 767
Query: 476 SSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE 535
SSHGTLYKATLDSGHMLTVKWLRVGLV+HKKEFA+EVK+IGSMRHPNIVPL AYYWGPRE
Sbjct: 768 SSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVPLLAYYWGPRE 827
Query: 536 QERLLLADYIQGDSLALHLY 555
QERLLLADYI GD+LALHLY
Sbjct: 828 QERLLLADYIHGDNLALHLY 847
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356518714|ref|XP_003528023.1| PREDICTED: probable inactive receptor kinase At5g10020-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/559 (68%), Positives = 443/559 (79%), Gaps = 29/559 (5%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDL 60
SI INSTTL++LNLSSNSLSG+LPTSL+ C ++DLSRNM+SGDIS +QNWEA LE++ L
Sbjct: 314 SIGVINSTTLNILNLSSNSLSGSLPTSLRRCTVIDLSRNMLSGDISVIQNWEAPLEVIVL 373
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
SSNKLSGSLP++ + +LS T+D+S N+LKG IP
Sbjct: 374 SSNKLSGSLPSILETYSKLS------------------------TVDLSLNELKGSIPRG 409
Query: 121 FFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN 180
+S ++T LNLSGN F+G + L+SS ASELL++P Y PME LD S N+L GVLPS+IG
Sbjct: 410 LVASSSVTRLNLSGNQFTGPLLLQSSGASELLLMPPYQPMEYLDASNNSLEGVLPSEIGR 469
Query: 181 MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDL 240
MG LRLLNLA N SG++P+EL+KL LEYLDLS N F G IPDKLS L FN+S NDL
Sbjct: 470 MGALRLLNLARNGFSGQLPNELNKLFYLEYLDLSNNNFTGNIPDKLSSSLTAFNMSNNDL 529
Query: 241 SGPIPENLRNFPKSSFHPGNALLIFPDGVPSSATNSQGQNSARGKHHSSKSSIRVAIIVA 300
SG +PENLR+F SSF PGN L+ P+ P ++ +G+HHSSK +IR+AII+A
Sbjct: 530 SGHVPENLRHFSPSSFRPGNGKLMLPNDSPETSLVPDNI-PDKGRHHSSKGNIRIAIILA 588
Query: 301 SVGAAVMIVFVLLAYHRAQLKEFHGRTKFSGQTTGRDVKEGRFQRPSLFNFNSNVQRPPN 360
SVGAA+MI FVLLAYHR QLKEFHGR++F+GQ T RDVK G R SLF FN+NVQ P +
Sbjct: 589 SVGAAIMIAFVLLAYHRTQLKEFHGRSEFTGQNTRRDVKLGGLSRSSLFKFNTNVQPPTS 648
Query: 361 SSSFSNDHLLTSNSRSLS-GQAEFITEIIER--TEGG-APSSASMNPNLLDNHPATSGRK 416
S SFSNDHLLTSNSRSLS GQ+EFITEI E T+G A SSAS+NPNL+DN P +SGRK
Sbjct: 649 SLSFSNDHLLTSNSRSLSAGQSEFITEISEHGLTQGMVATSSASLNPNLMDNPPTSSGRK 708
Query: 417 SSPGSPLSSSPRFIEVCEQPVRLDVYSPDRLAGELFFLDASLAFTAEELSRAPAEVLGRS 476
SSPGSPLSSSPRFIE CE+PV LDVYSPDRLAGELFFLD+SLAFTAEELSRAPAEVLGRS
Sbjct: 709 SSPGSPLSSSPRFIEACEKPVMLDVYSPDRLAGELFFLDSSLAFTAEELSRAPAEVLGRS 768
Query: 477 SHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ 536
SHGTLYKATLDSGHMLTVKWLRVGLV+HKKEFA+EVK+IGSMRHPNIVPL AYYWGPREQ
Sbjct: 769 SHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVPLLAYYWGPREQ 828
Query: 537 ERLLLADYIQGDSLALHLY 555
ERLLLAD+I GD+LALHLY
Sbjct: 829 ERLLLADHIHGDNLALHLY 847
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 555 | ||||||
| TAIR|locus:2184058 | 1048 | AT5G10020 [Arabidopsis thalian | 0.931 | 0.493 | 0.588 | 4e-154 | |
| TAIR|locus:2059253 | 1020 | AT2G27060 [Arabidopsis thalian | 0.904 | 0.492 | 0.333 | 1.9e-62 | |
| TAIR|locus:2098267 | 836 | IMK2 "inflorescence meristem r | 0.369 | 0.245 | 0.351 | 2.9e-42 | |
| TAIR|locus:2181042 | 967 | AT5G01890 [Arabidopsis thalian | 0.381 | 0.219 | 0.343 | 7.3e-36 | |
| TAIR|locus:2102499 | 964 | AT3G56370 [Arabidopsis thalian | 0.358 | 0.206 | 0.364 | 4.8e-34 | |
| TAIR|locus:2008793 | 719 | AT1G67510 [Arabidopsis thalian | 0.181 | 0.140 | 0.446 | 4.2e-33 | |
| TAIR|locus:2122239 | 1136 | AT4G36180 [Arabidopsis thalian | 0.367 | 0.179 | 0.325 | 1.4e-32 | |
| TAIR|locus:2033000 | 702 | AT1G25320 [Arabidopsis thalian | 0.356 | 0.282 | 0.342 | 7.9e-32 | |
| TAIR|locus:2167948 | 966 | ERL1 "ERECTA-like 1" [Arabidop | 0.394 | 0.226 | 0.357 | 2.5e-31 | |
| TAIR|locus:2038706 | 716 | AT2G01210 [Arabidopsis thalian | 0.180 | 0.139 | 0.470 | 3.4e-31 |
| TAIR|locus:2184058 AT5G10020 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1503 (534.1 bits), Expect = 4.0e-154, P = 4.0e-154
Identities = 310/527 (58%), Positives = 372/527 (70%)
Query: 29 KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS 88
KSC ++DLS N SGD+S +Q WEA ++LDLSSN LSGSLPN TS F RLS +IRNNS
Sbjct: 340 KSCSVIDLSGNTFSGDVSVVQKWEATPDVLDLSSNNLSGSLPNFTSAFSRLSVLSIRNNS 399
Query: 89 VTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHA 148
V+G+LPSL S + +D+SSN+ G IP +FF+ +L +LNLS N G IP R S A
Sbjct: 400 VSGSLPSLWGDS-QFSVIDLSSNKFSGFIPVSFFTFASLRSLNLSRNNLEGPIPFRGSRA 458
Query: 149 SELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGXXXXXXXXXXXXSGKMPSELSKLGAL 208
SELLVL SYP ME LDLS N+LTG+LP DIG M SG++PS+L+KL L
Sbjct: 459 SELLVLNSYPQMELLDLSTNSLTGMLPGDIGTMEKIKVLNLANNKLSGELPSDLNKLSGL 518
Query: 209 EYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPENLRNFPKSSFHPGNALLIFPDG 268
+LDLS N FKG+IP+KL ++ FNVSYNDLSG IPE+LR++P SSF+PGN+ L P
Sbjct: 519 LFLDLSNNTFKGQIPNKLPSQMVGFNVSYNDLSGIIPEDLRSYPPSSFYPGNSKLSLPGR 578
Query: 269 VPSSATNSQGQNSARGKHHXXXXXXXXXXXXXXXXXXXXXXFVLLAYHRAQLKEFHGRTK 328
+P+ +S G S GK H FVL AYHR QLK+FHGR +
Sbjct: 579 IPA---DSSGDLSLPGKKHHSKLSIRIAIIVASVGAAIMILFVLFAYHRTQLKDFHGRNR 635
Query: 329 FSGQTTGRDVKEGRFQRPSLFNFNSNVQRPPNSSSFSNDHLLTSNSRSLSGQAEFITEII 388
F+ Q T RD K GR RPSLFNF+SNV++ +S SFSNDHLLT+NSRSLSG EI
Sbjct: 636 FTDQATTRDTKFGRSSRPSLFNFSSNVEQQSSSLSFSNDHLLTANSRSLSGIPGCEAEIS 695
Query: 389 ERTEGGAPSSASMNPNLLDNHPATXXXXXXXXXXXXXXXXFIEVCEQPVRLDVYSPDRLA 448
E+ GAP++++ NLLD++PA +QPV LDVYSPDRLA
Sbjct: 696 EQ---GAPATSAPT-NLLDDYPAASGRKSSSGGSPLSSSP--RFSDQPVMLDVYSPDRLA 749
Query: 449 GELFFLDASLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEF 508
GELFFLD SL TAEELSRAPAEVLGRSSHGTLYKATLD+GHMLTVKWLRVGLVRHKK+F
Sbjct: 750 GELFFLDVSLKLTAEELSRAPAEVLGRSSHGTLYKATLDNGHMLTVKWLRVGLVRHKKDF 809
Query: 509 AKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDSLALHLY 555
A+E KKIGS++HPNIVPLRAYYWGPREQERLLL+DY++G+SLA+HLY
Sbjct: 810 AREAKKIGSLKHPNIVPLRAYYWGPREQERLLLSDYLRGESLAMHLY 856
|
|
| TAIR|locus:2059253 AT2G27060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 644 (231.8 bits), Expect = 1.9e-62, P = 1.9e-62
Identities = 181/542 (33%), Positives = 261/542 (48%)
Query: 34 LDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTL 93
LDLS N + G I + + + LE L+LSSN+LSGSLP + + ++ NN ++G L
Sbjct: 296 LDLSLNQLEGPIGSITS--STLEKLNLSSNRLSGSLP---LKVGHCAIIDLSNNKISGEL 350
Query: 94 PSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIP--------LRS 145
+ + + +SSN L G +P + LT+L + N G +P L+
Sbjct: 351 SRIQNWGDSVEIIRLSSNSLTGTLPGQTSQFLRLTSLKAANNSLQGVLPFILGTYPELKE 410
Query: 146 ---SHASELLVLPSY----PPMESLDLSGNALTGVLP----SDIGNMGXXXXXXXXXXXX 194
SH V+PS + L+LS N +G LP S +GN+
Sbjct: 411 IDLSHNQLSGVIPSNLFISAKLTELNLSNNNFSGSLPLQDASTVGNLSLTNIGLSHNSL- 469
Query: 195 SGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPENLRNFPKS 254
G + EL++ L LDLS N F+G IPD L L F VS N+LSG +PENLR FP S
Sbjct: 470 GGVLSEELTRFHNLISLDLSYNNFEGNIPDGLPDSLKMFTVSANNLSGNVPENLRRFPDS 529
Query: 255 SFHPGNALLIFPDGVPSSATNSQGQNSARGKHHXXXXXXXXXXXXXXXXXXXXXXFVLLA 314
+FHPGNALL P +P T+ + G H V +
Sbjct: 530 AFHPGNALLNVPISLPKDKTDITLRK--HGYH--MKTSVKAALIIGLVVGTALLALVCVM 585
Query: 315 YHRAQLKEFHGRTKFSGQTTGRDVKEGRFQRPSLFNFNSNVQRPPNSSSFSNDHLLTSNS 374
+H L++ H K TG + + PS +SNV NS + T+++
Sbjct: 586 FH-FMLRKQHDEEK--SDVTGEKSIVPKTE-PS----SSNVIAAKNSVQENESSSSTTST 637
Query: 375 RSLSGQAEFITEIIERTEGGAPSSASMN-PNLLDNHPATXXXXXXXXXXXXXXXXFIEVC 433
S+ + + + SS + PN + H + ++
Sbjct: 638 PSIKAKLPVSSSRFSQYSDSENSSPFLKEPNE-ELHSESRKDEILSSQVSSSTPSLPKIQ 696
Query: 434 EQPVR-LDVYSPDRLAGELFFLDASLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHML 492
P + RL G L+ D+SL TAEELSRAPAE +GRS HGTLY+A L+S +L
Sbjct: 697 NSPDNPTSRQTSMRLDGNLYIFDSSLKLTAEELSRAPAEAIGRSCHGTLYRAVLNSDSVL 756
Query: 493 TVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDSLAL 552
VKWLR G + KKEFA+E+KK+G++ HPN+V L+AYYWGP+E E+L+++ Y+ LA
Sbjct: 757 AVKWLREGTAKGKKEFAREIKKLGNINHPNLVSLQAYYWGPKEHEKLIISRYMDAPCLAF 816
Query: 553 HL 554
+L
Sbjct: 817 YL 818
|
|
| TAIR|locus:2098267 IMK2 "inflorescence meristem receptor-like kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 289 (106.8 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 77/219 (35%), Positives = 111/219 (50%)
Query: 36 LSRNMISGDIS-DMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLP 94
L N +SG I + N L+ LDLSSN+L+G++P ++ RL N+ NS++G LP
Sbjct: 149 LFNNRLSGSIPVSLGNCPL-LQNLDLSSNQLTGAIPPSLTESTRLYRLNLSFNSLSGPLP 207
Query: 95 SLLEISPRLVTLDVSSNQLKGPIPDNFFS-SMALTNLNLSGNGFSGAIPLRSSHASELLV 153
+ S L LD+ N L G IPD F + S L LNL N FSGA+P+
Sbjct: 208 VSVARSYTLTFLDLQHNNLSGSIPDFFVNGSHPLKTLNLDHNRFSGAVPVS--------- 258
Query: 154 LPSYPPMESLDLSGNALTGVLPSDIGNMGXXXXXXXXXXXXSGKMPSELSKLGALEYLDL 213
L + +E + +S N L+G +P + G + +G +P S L +L L+L
Sbjct: 259 LCKHSLLEEVSISHNQLSGSIPRECGGLPHLQSLDFSYNSINGTIPDSFSNLSSLVSLNL 318
Query: 214 SGNQFKGEIPDKLSL--KLNEFNVSYNDLSGPIPENLRN 250
N KG IPD + L E N+ N ++GPIPE + N
Sbjct: 319 ESNHLKGPIPDAIDRLHNLTELNLKRNKINGPIPETIGN 357
|
|
| TAIR|locus:2181042 AT5G01890 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 283 (104.7 bits), Expect = 7.3e-36, Sum P(2) = 7.3e-36
Identities = 77/224 (34%), Positives = 114/224 (50%)
Query: 30 SCVILDLSRNMISGDISD-MQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS 88
S ++D S N +SG I D +L + L++NKL+GS+P S L+ N+ +N
Sbjct: 117 SLQVVDFSGNNLSGRIPDGFFEQCGSLRSVSLANNKLTGSIPVSLSYCSTLTHLNLSSNQ 176
Query: 89 VTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHA 148
++G LP + L +LD S N L+G IPD L ++NLS N FSG +P
Sbjct: 177 LSGRLPRDIWFLKSLKSLDFSHNFLQGDIPDGLGGLYDLRHINLSRNWFSGDVPSDIGRC 236
Query: 149 SELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGXXXXXXXXXXXXSGKMPSELSKLGAL 208
S L +SLDLS N +G LP + ++G G++P + + L
Sbjct: 237 SSL---------KSLDLSENYFSGNLPDSMKSLGSCSSIRLRGNSLIGEIPDWIGDIATL 287
Query: 209 EYLDLSGNQFKGEIPDKL-SLK-LNEFNVSYNDLSGPIPENLRN 250
E LDLS N F G +P L +L+ L + N+S N L+G +P+ L N
Sbjct: 288 EILDLSANNFTGTVPFSLGNLEFLKDLNLSANMLAGELPQTLSN 331
|
|
| TAIR|locus:2102499 AT3G56370 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 287 (106.1 bits), Expect = 4.8e-34, Sum P(2) = 4.8e-34
Identities = 79/217 (36%), Positives = 112/217 (51%)
Query: 34 LDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTL 93
LDLSRN +SG I L+ +DLS N LSGSLPN Q + N+ N++ G +
Sbjct: 220 LDLSRNRLSGPIPSEIGSCMLLKTIDLSENSLSGSLPNTFQQLSLCYSLNLGKNALEGEV 279
Query: 94 PSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLV 153
P + L TLD+S N+ G +PD+ + +AL LN SGNG G++P+ +++ LL
Sbjct: 280 PKWIGEMRSLETLDLSMNKFSGQVPDSIGNLLALKVLNFSGNGLIGSLPVSTANCINLL- 338
Query: 154 LPSYPPMESLDLSGNALTGVLPSDIGNMGXXXXXXXXXXXXSGKMPSELSKLGALEYLDL 213
+LDLSGN+LTG LP + G +G + ++ LDL
Sbjct: 339 --------ALDLSGNSLTGKLPMWLFQDGSRDVSALKNDNSTGGIKK-------IQVLDL 383
Query: 214 SGNQFKGEIPDKLS-LK-LNEFNVSYNDLSGPIPENL 248
S N F GEI L L+ L ++S N L+GPIP +
Sbjct: 384 SHNAFSGEIGAGLGDLRDLEGLHLSRNSLTGPIPSTI 420
|
|
| TAIR|locus:2008793 AT1G67510 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 222 (83.2 bits), Expect = 4.2e-33, Sum P(2) = 4.2e-33
Identities = 46/103 (44%), Positives = 65/103 (63%)
Query: 449 GELFFLDASLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEF 508
GEL +D +F +EL RA A VLG+S G +YK L +G + V+ L G + KEF
Sbjct: 392 GELVAIDKGFSFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEF 451
Query: 509 AKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDSLA 551
EV+ +G ++HPN+V LRAYYW P E+LL++D++ SLA
Sbjct: 452 VTEVQAMGKVKHPNVVKLRAYYWAP--DEKLLISDFVNNGSLA 492
|
|
| TAIR|locus:2122239 AT4G36180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 289 (106.8 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 70/215 (32%), Positives = 110/215 (51%)
Query: 34 LDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTL 93
L L+ N ++G+I +L++LD N L G +P L ++ NS +G +
Sbjct: 361 LKLANNSLTGEIPVEIKQCGSLDVLDFEGNSLKGQIPEFLGYMKALKVLSLGRNSFSGYV 420
Query: 94 PSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLV 153
PS + +L L++ N L G P + +L+ L+LSGN FSGA+P+ S+ S L
Sbjct: 421 PSSMVNLQQLERLNLGENNLNGSFPVELMALTSLSELDLSGNRFSGAVPVSISNLSNL-- 478
Query: 154 LPSYPPMESLDLSGNALTGVLPSDIGNMGXXXXXXXXXXXXSGKMPSELSKLGALEYLDL 213
S+ L+LSGN +G +P+ +GN+ SG++P ELS L ++ + L
Sbjct: 479 --SF-----LNLSGNGFSGEIPASVGNLFKLTALDLSKQNMSGEVPVELSGLPNVQVIAL 531
Query: 214 SGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPE 246
GN F G +P+ S + L N+S N SG IP+
Sbjct: 532 QGNNFSGVVPEGFSSLVSLRYVNLSSNSFSGEIPQ 566
|
|
| TAIR|locus:2033000 AT1G25320 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 216 (81.1 bits), Expect = 7.9e-32, Sum P(2) = 7.9e-32
Identities = 74/216 (34%), Positives = 100/216 (46%)
Query: 58 LDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPI 117
L + KL G LP+ L N+R+N ++G LP L + L +L + N L G I
Sbjct: 72 LSIPKKKLLGYLPSSLGLLSNLRHLNLRSNELSGNLPVELFKAQGLQSLVLYGNFLSGSI 131
Query: 118 PDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSD 177
P+ L L+LS N +G+IP + L S DLS N LTG +PS
Sbjct: 132 PNEIGDLKFLQILDLSRNSLNGSIPESVLKCNRL---------RSFDLSQNNLTGSVPSG 182
Query: 178 IG-NMGXXXXXXXXXXXXSGKMPSELSKLGALE-YLDLSGNQFKGEIPDKLSLKLNE--- 232
G ++ G +P +L L L+ LDLS N F G IP L L E
Sbjct: 183 FGQSLASLQKLDLSSNNLIGLVPDDLGNLTRLQGTLDLSHNSFSGSIPASLG-NLPEKVY 241
Query: 233 FNVSYNDLSGPIPEN--LRNFPKSSFHPGNALLIFP 266
N++YN+LSGPIP+ L N ++F GN L P
Sbjct: 242 VNLAYNNLSGPIPQTGALVNRGPTAFL-GNPRLCGP 276
|
|
| TAIR|locus:2167948 ERL1 "ERECTA-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 301 (111.0 bits), Expect = 2.5e-31, Sum P(2) = 2.5e-31
Identities = 84/235 (35%), Positives = 124/235 (52%)
Query: 34 LDLSRNMISGDIS-DMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGT 92
L L+ N + G I ++ E E L+L++N+L G +P+ S L+ FN+ N ++G+
Sbjct: 339 LQLNDNKLVGTIPPELGKLEQLFE-LNLANNRLVGPIPSNISSCAALNQFNVHGNLLSGS 397
Query: 93 LPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELL 152
+P L L++SSN KG IP + L L+LSGN FSG+IPL LL
Sbjct: 398 IPLAFRNLGSLTYLNLSSNNFKGKIPVELGHIINLDKLDLSGNNFSGSIPLTLGDLEHLL 457
Query: 153 VLPSYPPMESLDLSGNALTGVLPSDIGNMGXXXXXXXXXXXXSGKMPSELSKLGALEYLD 212
+L +LS N L+G LP++ GN+ SG +P+EL +L L L
Sbjct: 458 IL---------NLSRNHLSGQLPAEFGNLRSIQMIDVSFNLLSGVIPTELGQLQNLNSLI 508
Query: 213 LSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIP--ENLRNFPKSSFHPGNALL 263
L+ N+ G+IPD+L+ L NVS+N+LSG +P +N F +SF GN L
Sbjct: 509 LNNNKLHGKIPDQLTNCFTLVNLNVSFNNLSGIVPPMKNFSRFAPASF-VGNPYL 562
|
|
| TAIR|locus:2038706 AT2G01210 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 219 (82.2 bits), Expect = 3.4e-31, Sum P(2) = 3.4e-31
Identities = 48/102 (47%), Positives = 64/102 (62%)
Query: 454 LDASLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVK 513
LDA +AF EEL +A A VLG+S G +YK L++G L V+ L G + KEF EV+
Sbjct: 391 LDAQVAFNLEELLKASAFVLGKSGIGIVYKVVLENGLTLAVRRLGEGGSQRFKEFQTEVE 450
Query: 514 KIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDSLALHLY 555
IG ++HPNI LRAYYW E+LL+ DY+ +LA L+
Sbjct: 451 AIGKLKHPNIASLRAYYWSV--DEKLLIYDYVSNGNLATALH 490
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 555 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-33 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-32 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-30 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 5e-29 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-28 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-28 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 6e-26 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-24 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 7e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-10 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 6e-10 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-09 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 2e-08 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-07 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 1e-07 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 6e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 8e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-06 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 1e-04 | |
| PRK15370 | 754 | PRK15370, PRK15370, E3 ubiquitin-protein ligase Sl | 1e-04 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 2e-04 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 2e-04 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 5e-04 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 0.001 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 0.001 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 0.002 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 0.003 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 1e-33
Identities = 92/246 (37%), Positives = 130/246 (52%), Gaps = 15/246 (6%)
Query: 10 LSVLNLSSNSLSGTLPTSL---KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
L VL L SN SG +P +L + +LDLS N ++G+I + NL L L SN L
Sbjct: 334 LQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLE 393
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA 126
G +P L +++NS +G LPS P + LD+S+N L+G I + +
Sbjct: 394 GEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPS 453
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRL 186
L L+L+ N F G +P S + L E+LDLS N +G +P +G++ L
Sbjct: 454 LQMLSLARNKFFGGLP-DSFGSKRL---------ENLDLSRNQFSGAVPRKLGSLSELMQ 503
Query: 187 LNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLK--LNEFNVSYNDLSGPI 244
L L+ N LSG++P ELS L LDLS NQ G+IP S L++ ++S N LSG I
Sbjct: 504 LKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEI 563
Query: 245 PENLRN 250
P+NL N
Sbjct: 564 PKNLGN 569
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 7e-32
Identities = 82/252 (32%), Positives = 123/252 (48%), Gaps = 13/252 (5%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSS 62
N L L L N LSG +P S L+ + LDLS N +SG+I ++ NLEIL L S
Sbjct: 258 NLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFS 317
Query: 63 NKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFF 122
N +G +P + RL + +N +G +P L L LD+S+N L G IP+
Sbjct: 318 NNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLC 377
Query: 123 SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMG 182
SS L L L N G IP L + L N+ +G LPS+ +
Sbjct: 378 SSGNLFKLILFSNSLEGEIPKSLGACRSL---------RRVRLQDNSFSGELPSEFTKLP 428
Query: 183 RLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKL-SLKLNEFNVSYNDLS 241
+ L+++NN+L G++ S + +L+ L L+ N+F G +PD S +L ++S N S
Sbjct: 429 LVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFS 488
Query: 242 GPIPENLRNFPK 253
G +P L + +
Sbjct: 489 GAVPRKLGSLSE 500
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 2e-30
Identities = 89/261 (34%), Positives = 134/261 (51%), Gaps = 20/261 (7%)
Query: 7 STTLSVLNLSSNSLSGTLPTSLKSCV-ILDLSRNMISGDISDMQNWEANLEILDLSSNKL 65
S++L LNLS+N+ +G++P + LDLS NM+SG+I + ++L++LDL N L
Sbjct: 117 SSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVL 176
Query: 66 SGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM 125
G +PN + L + +N + G +P L L + + N L G IP
Sbjct: 177 VGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLT 236
Query: 126 ALTNLNLSGNGFSGAIPLRSSHASELLVLPSY--------PP-------MESLDLSGNAL 170
+L +L+L N +G IP + L L Y PP + SLDLS N+L
Sbjct: 237 SLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSL 296
Query: 171 TGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKL 230
+G +P + + L +L+L +N+ +GK+P L+ L L+ L L N+F GEIP L K
Sbjct: 297 SGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLG-KH 355
Query: 231 NEFNV---SYNDLSGPIPENL 248
N V S N+L+G IPE L
Sbjct: 356 NNLTVLDLSTNNLTGEIPEGL 376
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 5e-29
Identities = 92/271 (33%), Positives = 129/271 (47%), Gaps = 33/271 (12%)
Query: 8 TTLSVLNLSSNSLSGTLP---TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK 64
L L+LS NSLSG +P L++ IL L N +G I L++L L SNK
Sbjct: 284 QKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNK 343
Query: 65 LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSS 124
SG +P + + L+ ++ N++TG +P L S L L + SN L+G IP + +
Sbjct: 344 FSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGAC 403
Query: 125 MALTNLNLSGNGFSGAIPLRSSHASELLVLP---------------------SYPPMESL 163
+L + L N FSG +P SE LP P ++ L
Sbjct: 404 RSLRRVRLQDNSFSGELP------SEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQML 457
Query: 164 DLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIP 223
L+ N G LP G+ RL L+L+ N SG +P +L L L L LS N+ GEIP
Sbjct: 458 SLARNKFFGGLPDSFGS-KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIP 516
Query: 224 DKLSL--KLNEFNVSYNDLSGPIPENLRNFP 252
D+LS KL ++S+N LSG IP + P
Sbjct: 517 DELSSCKKLVSLDLSHNQLSGQIPASFSEMP 547
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 2e-28
Identities = 68/202 (33%), Positives = 105/202 (51%), Gaps = 14/202 (6%)
Query: 58 LDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLP-SLLEISPRLVTLDVSSNQLKGP 116
+DLS +SG + + + + T N+ NN ++G +P + S L L++S+N G
Sbjct: 74 IDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGS 133
Query: 117 IPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPS 176
IP + L L+LS N SG IP S L VL DL GN L G +P+
Sbjct: 134 IPRGSIPN--LETLDLSNNMLSGEIPNDIGSFSSLKVL---------DLGGNVLVGKIPN 182
Query: 177 DIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFN 234
+ N+ L L LA+N L G++P EL ++ +L+++ L N GEIP ++ LN +
Sbjct: 183 SLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLD 242
Query: 235 VSYNDLSGPIPENLRNFPKSSF 256
+ YN+L+GPIP +L N +
Sbjct: 243 LVYNNLTGPIPSSLGNLKNLQY 264
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 119 bits (299), Expect = 4e-28
Identities = 90/251 (35%), Positives = 125/251 (49%), Gaps = 19/251 (7%)
Query: 10 LSVLNLSSNSLSGTLP----TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKL 65
+ +NLS+N LSG +P T+ S L+LS N +G I + NLE LDLS+N L
Sbjct: 95 IQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIP--RGSIPNLETLDLSNNML 152
Query: 66 SGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM 125
SG +PN F L ++ N + G +P+ L L L ++SNQL G IP
Sbjct: 153 SGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMK 212
Query: 126 ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLR 185
+L + L N SG IP + L LDL N LTG +PS +GN+ L+
Sbjct: 213 SLKWIYLGYNNLSGEIPYEIGGLTSL---------NHLDLVYNNLTGPIPSSLGNLKNLQ 263
Query: 186 LLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSY---NDLSG 242
L L N LSG +P + L L LDLS N GEIP+ L ++L + + N+ +G
Sbjct: 264 YLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPE-LVIQLQNLEILHLFSNNFTG 322
Query: 243 PIPENLRNFPK 253
IP L + P+
Sbjct: 323 KIPVALTSLPR 333
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 6e-26
Identities = 79/239 (33%), Positives = 111/239 (46%), Gaps = 14/239 (5%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCVILD---LSRNMISGDISDMQNWEANLEILDLSS 62
+S L L L SNSL G +P SL +C L L N SG++ + LD+S+
Sbjct: 378 SSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISN 437
Query: 63 NKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFF 122
N L G + + L ++ N G LP S RL LD+S NQ G +P
Sbjct: 438 NNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG-SKRLENLDLSRNQFSGAVPRKLG 496
Query: 123 SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMG 182
S L L LS N SG IP S +L+ SLDLS N L+G +P+ M
Sbjct: 497 SLSELMQLKLSENKLSGEIPDELSSCKKLV---------SLDLSHNQLSGQIPASFSEMP 547
Query: 183 RLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSYNDL 240
L L+L+ N LSG++P L + +L +++S N G +P + L +N V+ N
Sbjct: 548 VLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNID 606
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 3e-24
Identities = 81/256 (31%), Positives = 120/256 (46%), Gaps = 14/256 (5%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSL---KSCVILDLSRNMISGDISDMQNWEANLEILDLSS 62
N T+L L L+SN L G +P L KS + L N +SG+I +L LDL
Sbjct: 186 NLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVY 245
Query: 63 NKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFF 122
N L+G +P+ L + N ++G +P + +L++LD+S N L G IP+
Sbjct: 246 NNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVI 305
Query: 123 SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMG 182
L L+L N F+G IP + L S P ++ L L N +G +P ++G
Sbjct: 306 QLQNLEILHLFSNNFTGKIP---------VALTSLPRLQVLQLWSNKFSGEIPKNLGKHN 356
Query: 183 RLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSL--KLNEFNVSYNDL 240
L +L+L+ N+L+G++P L G L L L N +GEIP L L + N
Sbjct: 357 NLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSF 416
Query: 241 SGPIPENLRNFPKSSF 256
SG +P P F
Sbjct: 417 SGELPSEFTKLPLVYF 432
|
Length = 968 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 71.0 bits (174), Expect = 7e-13
Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 160 MESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFK 219
++ L L L G +P+DI + L+ +NL+ N + G +P L + +LE LDLS N F
Sbjct: 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFN 479
Query: 220 GEIPDKLSL--KLNEFNVSYNDLSGPIPENL--RNFPKSSFH-PGNALLIFPDGVPSSAT 274
G IP+ L L N++ N LSG +P L R ++SF+ NA L G+ +
Sbjct: 480 GSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRAC-- 537
Query: 275 NSQGQNSARGKHHSSKSSIRVAIIVASVGAAVMIVFVLLAYHRAQ----LKEFH------ 324
G H S + I +A V SV +++ + + R Q +
Sbjct: 538 ---------GPHLSVGAKIGIAFGV-SVAFLFLVICAMCWWKRRQNILRAQRIAAREAPY 587
Query: 325 --GRTKFSGQTTGRDVKEGRFQRPSLFNFNSNVQRPP 359
RT FS RDV+ R R + + + + P
Sbjct: 588 AKARTHFS-----RDVQMTRHHRQNHGSARTAAENGP 619
|
Length = 623 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 61.8 bits (150), Expect = 5e-10
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 119 DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDI 178
D+ + L L G G IP S L +S++LSGN++ G +P +
Sbjct: 412 DSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHL---------QSINLSGNSIRGNIPPSL 462
Query: 179 GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS---LKLNEFNV 235
G++ L +L+L+ N +G +P L +L +L L+L+GN G +P L L FN
Sbjct: 463 GSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNF 522
Query: 236 SYN 238
+ N
Sbjct: 523 TDN 525
|
Length = 623 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 6e-10
Identities = 79/280 (28%), Positives = 116/280 (41%), Gaps = 26/280 (9%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDL 60
S+ ++ + +S L+ S N +L LDL+ N + +IS++ NL LDL
Sbjct: 71 SLDLLSPSGISSLDGSENL------LNLLPLPSLDLNLNRLRSNISELLE-LTNLTSLDL 123
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
+N ++ P + L ++ +N + +LPS L P L LD+S N L +P
Sbjct: 124 DNNNITDIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLSD-LPKL 181
Query: 121 FFSSMALTNLNLSGNGFSG--AIPLRSSHASEL-----------LVLPSYPPMESLDLSG 167
+ L NL+LSGN S S EL L + + L+LS
Sbjct: 182 LSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSN 241
Query: 168 NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS 227
N L LP IGN+ L L+L+NN +S S L L L LDLSGN +P
Sbjct: 242 NKLED-LPESIGNLSNLETLDLSNNQIS--SISSLGSLTNLRELDLSGNSLSNALPLIAL 298
Query: 228 LKLNEFNVSYNDLSGPIPENLRNFP-KSSFHPGNALLIFP 266
L L + L+ E N ++ N P
Sbjct: 299 LLLLLELLLNLLLTLKALELKLNSILLNNNILSNGETSSP 338
|
Length = 394 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 1e-09
Identities = 31/85 (36%), Positives = 44/85 (51%)
Query: 58 LDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPI 117
L L + L G +PN S+ L + N+ NS+ G +P L L LD+S N G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 118 PDNFFSSMALTNLNLSGNGFSGAIP 142
P++ +L LNL+GN SG +P
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVP 507
|
Length = 623 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 2e-08
Identities = 76/268 (28%), Positives = 108/268 (40%), Gaps = 32/268 (11%)
Query: 4 GINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMIS----GDISDMQNWEA------ 53
++S TL +L S + L S LD S N+++ + N
Sbjct: 53 NLSSNTLLLLPSSLSRLLSLDLLSPSGISSLDGSENLLNLLPLPSLDLNLNRLRSNISEL 112
Query: 54 ----NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVS 109
NL LDL +N ++ P + L ++ +N + +LPS L P L LD+S
Sbjct: 113 LELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLS 171
Query: 110 SNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNA 169
N L +P + L NL+LSGN S +P S L E LDLS N+
Sbjct: 172 FNDLSD-LPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSAL---------EELDLSNNS 220
Query: 170 LTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-- 227
+ L S + N+ L L L+NN +P + L LE LDLS NQ L
Sbjct: 221 II-ELLSSLSNLKNLSGLELSNN-KLEDLPESIGNLSNLETLDLSNNQ--ISSISSLGSL 276
Query: 228 LKLNEFNVSYNDLSGPIPENLRNFPKSS 255
L E ++S N LS +P
Sbjct: 277 TNLRELDLSGNSLSNALPLIALLLLLLE 304
|
Length = 394 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 1e-07
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 10 LSVLNLSSNSLSGTLPTSL---KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
L +NLS NS+ G +P SL S +LDLS N +G I + +L IL+L+ N LS
Sbjct: 444 LQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLS 503
Query: 67 GSLP-NLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRL 103
G +P L + ++FN +N+ +P L P L
Sbjct: 504 GRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACGPHL 541
|
Length = 623 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 60/259 (23%), Positives = 94/259 (36%), Gaps = 55/259 (21%)
Query: 5 INSTTLSVLNLSSNSLSGTLPTSLKSCV------ILDLSRNMISGDISDM-----QNWEA 53
L L+LS N+L L+S + L L+ N + + ++
Sbjct: 78 TKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPP 137
Query: 54 NLEILDLSSNKLSG----SLPNLTSQFDRLSTFNIRNNSVTGT-LPSLLEI---SPRLVT 105
LE L L N+L G +L L N+ NN + + +L E + L
Sbjct: 138 ALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEV 197
Query: 106 LDVSSNQLK----GPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPME 161
LD+++N L + + S +L LNL N L + A+ L
Sbjct: 198 LDLNNNGLTDEGASALAETLASLKSLEVLNLGDN------NLTDAGAAALA--------- 242
Query: 162 SLDLSGNALTGVLPSDIGNMGRLRLLNLANNHL---SGKMPSE-LSKLGALEYLDLSGNQ 217
+AL S L L+L+ N + K +E L++ +L LDL GN+
Sbjct: 243 ------SALLSPNIS-------LLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNK 289
Query: 218 FKGEIPDKLSLKLNEFNVS 236
F E L+ L E
Sbjct: 290 FGEEGAQLLAESLLEPGNE 308
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 6e-07
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 161 ESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQF 218
+SLDLS N LT + + L++L+L+ N+L+ P S L +L LDLSGN
Sbjct: 3 KSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 8e-07
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 13 LNLSSNSLSGTLP---TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSL 69
L L + L G +P + L+ ++LS N I G+I +LE+LDLS N +GS+
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 70 PNLTSQFDRLSTFNIRNNSVTGTLPSLL 97
P Q L N+ NS++G +P+ L
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 1e-06
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 39/134 (29%)
Query: 75 QFDR------LSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALT 128
QFD + + N + G +P+ + L ++++S N ++G IP + S +L
Sbjct: 410 QFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLE 469
Query: 129 NLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLN 188
L+LS N F+G+IP ESL G + LR+LN
Sbjct: 470 VLDLSYNSFNGSIP------------------ESL---------------GQLTSLRILN 496
Query: 189 LANNHLSGKMPSEL 202
L N LSG++P+ L
Sbjct: 497 LNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 1e-04
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHK--KEFAKEVKKIGSMRHPNIVPLR 527
E+LGR S G++Y A D+G ++ VK + + + + +E++ + S++HPNIV
Sbjct: 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIV--- 62
Query: 528 AYYWGPREQER---LLLADYIQGDSLA 551
YY R++E+ + +Y+ G SL+
Sbjct: 63 RYYGSERDEEKNTLNIFLEYVSGGSLS 89
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|185268 PRK15370, PRK15370, E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 1e-04
Identities = 70/267 (26%), Positives = 112/267 (41%), Gaps = 45/267 (16%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDL 60
++ G N TL + S+ TLP +++ ++LS N I + + L+ LDL
Sbjct: 217 NLQG-NIKTLYANSNQLTSIPATLPDTIQ---EMELSINRI---TELPERLPSALQSLDL 269
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
NK+S NL + L ++ +NS+ TLP+ L + L+V SN L +P+
Sbjct: 270 FHNKISCLPENLP---EELRYLSVYDNSIR-TLPAHLPSG--ITHLNVQSNSLTA-LPET 322
Query: 121 FFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLP-SYPP-MESLDLSGNALTGVLPSDI 178
L L N L LP S PP ++ LD+S N +T VLP +
Sbjct: 323 L--PPGLKTLEAGENA--------------LTSLPASLPPELQVLDVSKNQIT-VLPETL 365
Query: 179 GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNE------ 232
+ L+++ N L+ +P L AL+ + S N +P+ L E
Sbjct: 366 PPT--ITTLDVSRNALT-NLPENLP--AALQIMQASRNNL-VRLPESLPHFRGEGPQPTR 419
Query: 233 FNVSYNDLSGPIPENLRNFPKSSFHPG 259
V YN S +N++ S + G
Sbjct: 420 IIVEYNPFSERTIQNMQRLMSSVGYQG 446
|
Length = 754 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 471 EVLGRSSHGTLYKA-TLDSGHMLTVKWLRVGLV-----RHKKEFAKEVKKIGSMRHPNIV 524
E+LG S G++Y+ LD G VK + + K+ +E+ + ++HPNIV
Sbjct: 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIV 65
Query: 525 PLRAYYWGPREQERL-LLADYIQGDSLA 551
Y RE++ L + + + G SLA
Sbjct: 66 ---QYLGTEREEDNLYIFLELVPGGSLA 90
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKE-FAKEVKKIGSMRHPNIVPLRAY 529
E +G+ + G +YK L + VK R L K F +E + + HPNIV L
Sbjct: 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGV 60
Query: 530 YWGPREQERLLLADYIQGDSLALHL 554
++Q ++ + + G SL L
Sbjct: 61 CV--QKQPIYIVMELVPGGSLLTFL 83
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 5e-04
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLT-----VKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIV 524
+ LG + G +YK TL VK L+ + +EF +E + + + HPNIV
Sbjct: 5 KKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIV 64
Query: 525 PL 526
L
Sbjct: 65 KL 66
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.001
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 473 LGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHKKE-FAKEVKKIGSMRHPNIVPLRAYY 530
LG GT+Y A +G + +K ++ E +E++ + + HPNIV L +
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 531 WGPREQERLLLADYIQGDSL 550
E L+ +Y +G SL
Sbjct: 61 E--DENHLYLVMEYCEGGSL 78
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 0.001
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLT-----VKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIV 524
+ LG + G +YK L VK L+ +EF +E + + + HPN+V
Sbjct: 5 KKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVV 64
Query: 525 PL 526
L
Sbjct: 65 KL 66
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 473 LGRSSHGTLYKATLD-----SGHMLTVKWLRV-GLVRHKKEFAKEVKKIGSMRHPNIVPL 526
LG G + D +G + VK L G +H+ +F +E++ + ++ H NIV
Sbjct: 12 LGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKY 71
Query: 527 RAYYWGPREQERLLLADYIQGDSLALHL 554
+ P + L+ +Y+ SL +L
Sbjct: 72 KGVCEKPGGRSLRLIMEYLPSGSLRDYL 99
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.003
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 473 LGRSSHGTLYKA-TLDSGHMLTVKWLRVGLVRHK--KEFAKEVKKIGSMRHPNIVPLRAY 529
+G + G +Y A LD+G ++ VK +R+ K KE A E+K + ++HPN+V Y
Sbjct: 8 IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLV---KY 64
Query: 530 YWGPREQERLLL-ADYIQGDSLA 551
Y +E++ + +Y G +L
Sbjct: 65 YGVEVHREKVYIFMEYCSGGTLE 87
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 555 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.95 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.91 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.9 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.88 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.82 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.81 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.77 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.77 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.75 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.74 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.72 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.72 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.7 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.69 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.69 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.68 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.67 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.67 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.66 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.66 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.64 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.63 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.62 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 99.58 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.47 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.45 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.45 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.41 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.39 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.36 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 99.34 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.33 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 99.32 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.3 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.29 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.28 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.27 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.27 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 99.26 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.24 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.23 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.23 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.22 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.21 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.19 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.17 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.16 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.15 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 99.14 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.14 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.13 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.13 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.13 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.13 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 99.12 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.12 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.12 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.11 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.1 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.1 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.1 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.09 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.09 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.08 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 99.08 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.07 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.07 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.06 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.06 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.06 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 99.05 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.05 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.04 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.04 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.04 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.04 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.03 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.03 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.03 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.02 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.02 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.02 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.02 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.02 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.02 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.01 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.01 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 98.99 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 98.99 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 98.99 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.99 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 98.99 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 98.99 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 98.98 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 98.98 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 98.98 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 98.98 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 98.98 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 98.98 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 98.98 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 98.97 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 98.97 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 98.97 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 98.96 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 98.96 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 98.96 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 98.96 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.96 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 98.95 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 98.95 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 98.95 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 98.94 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 98.94 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 98.94 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 98.94 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 98.94 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 98.94 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 98.93 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 98.93 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 98.93 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 98.93 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 98.93 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 98.93 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 98.92 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 98.92 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 98.92 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 98.92 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 98.92 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 98.91 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 98.91 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 98.91 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 98.91 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 98.91 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 98.91 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 98.91 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 98.91 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 98.91 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 98.9 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 98.9 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 98.9 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 98.9 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 98.9 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 98.9 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 98.9 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 98.9 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 98.9 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 98.89 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 98.89 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 98.89 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 98.89 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 98.89 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 98.89 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 98.89 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 98.88 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 98.88 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 98.88 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 98.88 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 98.88 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 98.88 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 98.88 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 98.88 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 98.87 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 98.87 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 98.87 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 98.87 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 98.87 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 98.87 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 98.87 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 98.87 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 98.87 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 98.86 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 98.86 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 98.86 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 98.86 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 98.86 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 98.86 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 98.86 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 98.86 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 98.86 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.85 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 98.85 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 98.85 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 98.85 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 98.85 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 98.85 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 98.85 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 98.85 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 98.85 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 98.85 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 98.85 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 98.85 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 98.84 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 98.84 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 98.84 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 98.84 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 98.84 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 98.84 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 98.84 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 98.84 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 98.84 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 98.83 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.83 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 98.83 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 98.83 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 98.83 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 98.83 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 98.83 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 98.83 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 98.83 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 98.83 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 98.82 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 98.82 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 98.82 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 98.82 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 98.82 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 98.82 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 98.82 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 98.82 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 98.82 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 98.81 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 98.81 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 98.81 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 98.81 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 98.81 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 98.81 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 98.81 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 98.81 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 98.81 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 98.81 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 98.8 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 98.8 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 98.8 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 98.8 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 98.8 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 98.79 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 98.79 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 98.79 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.79 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 98.79 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 98.79 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 98.79 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 98.79 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 98.79 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 98.78 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 98.78 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 98.78 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 98.78 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 98.78 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 98.78 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 98.77 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 98.77 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 98.77 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 98.77 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 98.77 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 98.77 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 98.77 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 98.77 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 98.77 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 98.76 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.76 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 98.76 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 98.76 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 98.76 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 98.76 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 98.76 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 98.76 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 98.76 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 98.76 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 98.76 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 98.75 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 98.75 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 98.75 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 98.75 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 98.75 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 98.75 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 98.75 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 98.74 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 98.74 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 98.74 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 98.74 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 98.74 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 98.74 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 98.74 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 98.74 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 98.74 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 98.74 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 98.73 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 98.73 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 98.73 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 98.73 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 98.73 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 98.73 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 98.73 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 98.73 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 98.73 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 98.72 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 98.72 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 98.72 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 98.71 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 98.71 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 98.71 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 98.71 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 98.71 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 98.71 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 98.71 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 98.71 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 98.7 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 98.7 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 98.7 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 98.7 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 98.7 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 98.69 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 98.69 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 98.69 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 98.69 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 98.68 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 98.68 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 98.67 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 98.67 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 98.67 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 98.67 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 98.66 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 98.66 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 98.66 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 98.66 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 98.65 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 98.65 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 98.65 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 98.64 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 98.64 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 98.64 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 98.63 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 98.63 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 98.63 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 98.63 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 98.62 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 98.62 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 98.62 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 98.61 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 98.6 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 98.59 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 98.59 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 98.59 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 98.59 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 98.58 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 98.57 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 98.57 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 98.57 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 98.57 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 98.57 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 98.56 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 98.56 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 98.56 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 98.56 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 98.56 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 98.55 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 98.55 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 98.55 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 98.55 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 98.54 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 98.54 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 98.54 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 98.53 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 98.52 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 98.52 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 98.51 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 98.51 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 98.51 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 98.51 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 98.5 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 98.5 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 98.48 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.47 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 98.47 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 98.47 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 98.47 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 98.46 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 98.46 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 98.45 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 98.45 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 98.44 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 98.44 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 98.43 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 98.43 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 98.43 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 98.42 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 98.42 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 98.42 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 98.41 | |
| COG5238 | 388 | RNA1 Ran GTPase-activating protein (RanGAP) involv | 98.4 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 98.39 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 98.39 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 98.39 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 98.39 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 98.38 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 98.38 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 98.38 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 98.37 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 98.37 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 98.35 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 98.35 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 98.35 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.33 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.33 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 98.32 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 98.32 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 98.31 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 98.3 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 98.3 | |
| COG5238 | 388 | RNA1 Ran GTPase-activating protein (RanGAP) involv | 98.29 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 98.28 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 98.28 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 98.28 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 98.26 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 98.25 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 98.24 | |
| KOG2120 | 419 | consensus SCF ubiquitin ligase, Skp2 component [Po | 98.23 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 98.23 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 98.22 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 98.2 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 98.2 | |
| KOG1644 | 233 | consensus U2-associated snRNP A' protein [RNA proc | 98.2 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 98.19 | |
| PTZ00284 | 467 | protein kinase; Provisional | 98.19 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 98.19 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 98.17 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 98.15 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 98.13 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 98.09 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 98.09 | |
| KOG2120 | 419 | consensus SCF ubiquitin ligase, Skp2 component [Po | 98.09 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 98.08 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 98.07 | |
| KOG1644 | 233 | consensus U2-associated snRNP A' protein [RNA proc | 98.07 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 98.05 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.01 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 97.94 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 97.93 | |
| PRK15386 | 426 | type III secretion protein GogB; Provisional | 97.9 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 97.9 | |
| PRK15386 | 426 | type III secretion protein GogB; Provisional | 97.89 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 97.85 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 97.83 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 97.83 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 97.8 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 97.73 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 97.7 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 97.66 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 97.64 | |
| smart00090 | 237 | RIO RIO-like kinase. | 97.64 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 97.64 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 97.6 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 97.58 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 97.54 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 97.52 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 97.51 | |
| PF13306 | 129 | LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_ | 97.45 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 97.36 | |
| PF13306 | 129 | LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_ | 97.31 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 97.31 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 97.3 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 97.26 | |
| KOG3665 | 699 | consensus ZYG-1-like serine/threonine protein kina | 97.24 | |
| KOG2739 | 260 | consensus Leucine-rich acidic nuclear protein [Cel | 97.2 | |
| KOG3665 | 699 | consensus ZYG-1-like serine/threonine protein kina | 97.17 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 97.12 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 97.11 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 97.1 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 97.01 | |
| KOG2739 | 260 | consensus Leucine-rich acidic nuclear protein [Cel | 97.01 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 96.94 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 96.91 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 96.9 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 96.76 | |
| KOG2123 | 388 | consensus Uncharacterized conserved protein [Funct | 96.69 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 96.68 | |
| KOG2123 | 388 | consensus Uncharacterized conserved protein [Funct | 96.66 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 96.39 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 96.3 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 96.25 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 96.23 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 96.21 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 95.99 | |
| KOG4308 | 478 | consensus LRR-containing protein [Function unknown | 95.94 | |
| KOG4308 | 478 | consensus LRR-containing protein [Function unknown | 95.83 | |
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 95.8 | |
| PF00560 | 22 | LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Le | 95.1 | |
| PF00560 | 22 | LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Le | 94.58 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 94.19 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 94.15 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 94.09 | |
| PF03109 | 119 | ABC1: ABC1 family; InterPro: IPR004147 This entry | 93.86 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 93.76 | |
| KOG1947 | 482 | consensus Leucine rich repeat proteins, some prote | 93.42 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-43 Score=402.57 Aligned_cols=423 Identities=29% Similarity=0.412 Sum_probs=285.5
Q ss_pred cCCCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccE
Q 048796 5 INSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLST 81 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 81 (555)
.++++|+.|+|++|.+++.+|.. +++|+.|+|++|++++..+..+..+.+|+.|++++|.+.+.+|..+..+++|+.
T Consensus 329 ~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~ 408 (968)
T PLN00113 329 TSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRR 408 (968)
T ss_pred hcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCE
Confidence 35678999999999998877754 567888999999888777776766777888888888888888888888888888
Q ss_pred EEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccc--cccc--------
Q 048796 82 FNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSH--ASEL-------- 151 (555)
Q Consensus 82 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~--~~~l-------- 151 (555)
|+|++|++++.+|..+..+++|+.|++++|++++.++..+..+++|+.|+|++|.+.+.+|..+.. +..+
T Consensus 409 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~ 488 (968)
T PLN00113 409 VRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFS 488 (968)
T ss_pred EECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccC
Confidence 888888888777777888888888888888887777777777777777777777777666654321 0000
Q ss_pred ----cccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh
Q 048796 152 ----LVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS 227 (555)
Q Consensus 152 ----~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 227 (555)
..+..+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|.+++.+|..+..+++|+.|||++|++++.+|..+.
T Consensus 489 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 568 (968)
T PLN00113 489 GAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLG 568 (968)
T ss_pred CccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHh
Confidence 0122457888889999998888888888888999999999999988888888899999999999999988888776
Q ss_pred --cCCCEEEeccCCCCCCcCcc--ccCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCcceeeeeehhhHH
Q 048796 228 --LKLNEFNVSYNDLSGPIPEN--LRNFPKSSFHPGNALLIFPDGVPSSATNSQGQNSARGKHHSSKSSIRVAIIVASVG 303 (555)
Q Consensus 228 --~~L~~L~ls~N~l~~~~p~~--l~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~ 303 (555)
..|+.|++++|+++|.+|.. +..+...++. +|+.+|.+.......++ .... . ... +..+++++++
T Consensus 569 ~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~-~n~~lc~~~~~~~~~~c-------~~~~-~-~~~-~~~~~~~~~~ 637 (968)
T PLN00113 569 NVESLVQVNISHNHLHGSLPSTGAFLAINASAVA-GNIDLCGGDTTSGLPPC-------KRVR-K-TPS-WWFYITCTLG 637 (968)
T ss_pred cCcccCEEeccCCcceeeCCCcchhcccChhhhc-CCccccCCccccCCCCC-------cccc-c-cce-eeeehhHHHH
Confidence 67899999999999888864 3444444444 88878864321111000 0000 1 111 1122222222
Q ss_pred HHHHHHHHHHHHHHhhhhhccCCCccCCccccccccccccccCccccccCCccCCCCCCCCCCCcccccCccccCCchhh
Q 048796 304 AAVMIVFVLLAYHRAQLKEFHGRTKFSGQTTGRDVKEGRFQRPSLFNFNSNVQRPPNSSSFSNDHLLTSNSRSLSGQAEF 383 (555)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (555)
+++++++++++++++++++...... .+.....
T Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-------------------------------------------- 669 (968)
T PLN00113 638 AFLVLALVAFGFVFIRGRNNLELKR----VENEDGT-------------------------------------------- 669 (968)
T ss_pred HHHHHHHHHHHHHHHHhhhcccccc----ccccccc--------------------------------------------
Confidence 2222222222222222221100000 0000000
Q ss_pred hhhhhhhccCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCcccceecccCeeEEeeCCcccCcceEeeccccccCHH
Q 048796 384 ITEIIERTEGGAPSSASMNPNLLDNHPATSGRKSSPGSPLSSSPRFIEVCEQPVRLDVYSPDRLAGELFFLDASLAFTAE 463 (555)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (555)
|...+ . . ......++.+
T Consensus 670 -----------------------------------------~~~~~------------~-----~-----~~~~~~~~~~ 686 (968)
T PLN00113 670 -----------------------------------------WELQF------------F-----D-----SKVSKSITIN 686 (968)
T ss_pred -----------------------------------------ccccc------------c-----c-----cccchhhhHH
Confidence 00000 0 0 0000113333
Q ss_pred HHhcc--cCCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEE
Q 048796 464 ELSRA--PAEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 464 ~l~~~--~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~l 540 (555)
++..+ ..++||+|+||.||+|+. .+|..||||+++..... ...|+..+++++|||||+++|+|...+. .++
T Consensus 687 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~--~~l 760 (968)
T PLN00113 687 DILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKG--AYL 760 (968)
T ss_pred HHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCC--CEE
Confidence 33222 257899999999999997 68999999998653321 1345888999999999999999988776 899
Q ss_pred EEeccCCCChhhhhC
Q 048796 541 LADYIQGDSLALHLY 555 (555)
Q Consensus 541 v~e~~~~GsL~~~l~ 555 (555)
|||||++|+|.++++
T Consensus 761 v~Ey~~~g~L~~~l~ 775 (968)
T PLN00113 761 IHEYIEGKNLSEVLR 775 (968)
T ss_pred EEeCCCCCcHHHHHh
Confidence 999999999998863
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=273.99 Aligned_cols=232 Identities=34% Similarity=0.519 Sum_probs=117.6
Q ss_pred CCCCCCEEECCCCcCCCCCCC-CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 6 NSTTLSVLNLSSNSLSGTLPT-SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++++|++|+|++|++++.+|. .+++|++|+|++|.+++..+..+..+++|++|+|++|.+.+.+|..+.++++|++|+|
T Consensus 116 ~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 195 (968)
T PLN00113 116 TSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTL 195 (968)
T ss_pred cCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeec
Confidence 344444444444444444432 3444555555555554444444445555555555555555555555555555555555
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~ 164 (555)
++|.+.+.+|..+..+++|++|+|++|++++.+|..+..+++|+.|+|++|.+.+.+|..+..+ ++|++|+
T Consensus 196 ~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l---------~~L~~L~ 266 (968)
T PLN00113 196 ASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNL---------KNLQYLF 266 (968)
T ss_pred cCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCC---------CCCCEEE
Confidence 5555555555555555555555555555555555555555555555555555555555544444 4444444
Q ss_pred ccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCC
Q 048796 165 LSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSG 242 (555)
Q Consensus 165 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~ 242 (555)
|++|.+++.+|..+..+++|+.|+|++|.+.+.+|..+..+++|+.|++++|.+++..|..+. ++|+.|++++|.+++
T Consensus 267 L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 346 (968)
T PLN00113 267 LYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSG 346 (968)
T ss_pred CcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcC
Confidence 444444444444444444444444444444444444444444444444444444444444333 344444444444444
Q ss_pred CcCc
Q 048796 243 PIPE 246 (555)
Q Consensus 243 ~~p~ 246 (555)
.+|.
T Consensus 347 ~~p~ 350 (968)
T PLN00113 347 EIPK 350 (968)
T ss_pred cCCh
Confidence 4443
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-26 Score=228.20 Aligned_cols=237 Identities=25% Similarity=0.256 Sum_probs=110.7
Q ss_pred CCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEee
Q 048796 9 TLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIR 85 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 85 (555)
+|+.|+|.+|.|+.+..+ .++-|+.|||+.|.|+.+....|..-.++++|+|++|.|+......|..+.+|..|.|+
T Consensus 126 hl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLs 205 (873)
T KOG4194|consen 126 HLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLS 205 (873)
T ss_pred ceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecc
Confidence 455566665555533332 23344555555555554444444443445555555555554444455555555555555
Q ss_pred CCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccC----------
Q 048796 86 NNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLP---------- 155 (555)
Q Consensus 86 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~---------- 155 (555)
+|+|+...+..|..+++|+.|+|..|+|.-..--.|.++++|+.|.|..|.+.......|-.+..+..+.
T Consensus 206 rNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn 285 (873)
T KOG4194|consen 206 RNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVN 285 (873)
T ss_pred cCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhh
Confidence 5555544444455555555555555554421122333333333333333333322222222221111100
Q ss_pred -----CCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--c
Q 048796 156 -----SYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--L 228 (555)
Q Consensus 156 -----~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~ 228 (555)
++..|+.|+||+|.|..+.++.+.-+++|+.|+|++|+|+...+.+|..+..|+.|+|++|.++......|. .
T Consensus 286 ~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~ls 365 (873)
T KOG4194|consen 286 EGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLS 365 (873)
T ss_pred cccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhh
Confidence 224555555555555555555555555555555555555555555555555555555555555432222222 4
Q ss_pred CCCEEEeccCCCCCCcC
Q 048796 229 KLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 229 ~L~~L~ls~N~l~~~~p 245 (555)
+|+.||++.|.++.+|-
T Consensus 366 sL~~LdLr~N~ls~~IE 382 (873)
T KOG4194|consen 366 SLHKLDLRSNELSWCIE 382 (873)
T ss_pred hhhhhcCcCCeEEEEEe
Confidence 55555555555555443
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-24 Score=216.98 Aligned_cols=233 Identities=26% Similarity=0.263 Sum_probs=155.3
Q ss_pred cCCCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccE
Q 048796 5 INSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLST 81 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 81 (555)
.|+.+|++++|.+|.++ .+|. ...+|+.|+|.+|.|+.+..+....++.|+.|||+.|.|+.+.-..|..-.++++
T Consensus 99 ~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~ 177 (873)
T KOG4194|consen 99 YNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKK 177 (873)
T ss_pred hcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceE
Confidence 35666777777777766 4452 2345777777777777666666666667777777777777544456666667777
Q ss_pred EEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcC
Q 048796 82 FNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPME 161 (555)
Q Consensus 82 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~ 161 (555)
|+|++|.|+......|..+.+|..|.|+.|+++...+..|.++++|+.|+|..|.|.-.--. .|.++++|+
T Consensus 178 L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~l---------tFqgL~Sl~ 248 (873)
T KOG4194|consen 178 LNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGL---------TFQGLPSLQ 248 (873)
T ss_pred EeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhh---------hhcCchhhh
Confidence 77777777766667777777777777777777755555666677777777777777522122 233446667
Q ss_pred EEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCC
Q 048796 162 SLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYND 239 (555)
Q Consensus 162 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~ 239 (555)
.|.|..|.|...-...|..|.++++|+|+.|+++..-..++.++++|+.||||+|.|....++.|. ++|+.||+++|.
T Consensus 249 nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~ 328 (873)
T KOG4194|consen 249 NLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNR 328 (873)
T ss_pred hhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccc
Confidence 777777777666666666777777777777777655556666667777777777777666665555 667777777777
Q ss_pred CCCCcCcc
Q 048796 240 LSGPIPEN 247 (555)
Q Consensus 240 l~~~~p~~ 247 (555)
|+..-+..
T Consensus 329 i~~l~~~s 336 (873)
T KOG4194|consen 329 ITRLDEGS 336 (873)
T ss_pred cccCChhH
Confidence 66544433
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-24 Score=217.16 Aligned_cols=230 Identities=32% Similarity=0.497 Sum_probs=188.5
Q ss_pred CCCcCCCCCCEEECCCCcCCCCCCCCC---CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCC
Q 048796 2 IHGINSTTLSVLNLSSNSLSGTLPTSL---KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDR 78 (555)
Q Consensus 2 ~~~~n~~~L~~L~Ls~N~l~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~ 78 (555)
...+.+..|+.||||+|++. ..|..+ +++-+|+||+|+|..++..+|..+..|-.||||+|++. .+|.-+..+.+
T Consensus 97 ~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~ 174 (1255)
T KOG0444|consen 97 TDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSM 174 (1255)
T ss_pred chhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhh
Confidence 45677889999999999998 778766 46779999999999999889999999999999999998 67777788889
Q ss_pred ccEEEeeCCcCC-------------------------CCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEcc
Q 048796 79 LSTFNIRNNSVT-------------------------GTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLS 133 (555)
Q Consensus 79 L~~L~L~~N~l~-------------------------~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls 133 (555)
|++|.|++|.+. .-+|..+..+.+|..+||+.|.+. .+|+.+.++.+|+.|+||
T Consensus 175 LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS 253 (1255)
T KOG0444|consen 175 LQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLS 253 (1255)
T ss_pred hhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccC
Confidence 999999998864 236667778888999999999997 889999999999999999
Q ss_pred CCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeeccccccc-CCCchhccCCCCCCEEe
Q 048796 134 GNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLS-GKMPSELSKLGALEYLD 212 (555)
Q Consensus 134 ~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~ 212 (555)
+|+|+. +..... .+.+|+.|+||.|+++ .+|.+++.++.|+.|++.+|+++ .-+|..++.+.+|+.+.
T Consensus 254 ~N~ite-L~~~~~---------~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~ 322 (1255)
T KOG0444|consen 254 GNKITE-LNMTEG---------EWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFH 322 (1255)
T ss_pred cCceee-eeccHH---------HHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHH
Confidence 999873 222222 3378899999999998 78889999999999999999886 34677888888888888
Q ss_pred CCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCcc
Q 048796 213 LSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPEN 247 (555)
Q Consensus 213 Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~ 247 (555)
.++|.+. ..|..+. .+|+.|.++.|.+- ..|..
T Consensus 323 aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPea 357 (1255)
T KOG0444|consen 323 AANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEA 357 (1255)
T ss_pred hhccccc-cCchhhhhhHHHHHhccccccee-echhh
Confidence 8888887 6776665 67888888888775 34544
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.1e-22 Score=201.00 Aligned_cols=229 Identities=27% Similarity=0.355 Sum_probs=161.3
Q ss_pred CCCCCCEEECCCCcCCCCCC--CCCCCCCEEEcCCCcCC--CCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccE
Q 048796 6 NSTTLSVLNLSSNSLSGTLP--TSLKSCVILDLSRNMIS--GDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLST 81 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~--~~l~~L~~L~L~~N~l~--~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 81 (555)
.|.+|+.|.+++|++....- ..++.|+.+++..|++. |+++++|.. ..|..||||+|+++ ..|..+....++-.
T Consensus 53 ~lqkLEHLs~~HN~L~~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l-~dLt~lDLShNqL~-EvP~~LE~AKn~iV 130 (1255)
T KOG0444|consen 53 RLQKLEHLSMAHNQLISVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRL-KDLTILDLSHNQLR-EVPTNLEYAKNSIV 130 (1255)
T ss_pred HHhhhhhhhhhhhhhHhhhhhhccchhhHHHhhhccccccCCCCchhccc-ccceeeecchhhhh-hcchhhhhhcCcEE
Confidence 46678999999999884322 35678888999999885 666777754 56999999999998 78888888889999
Q ss_pred EEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcC
Q 048796 82 FNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPME 161 (555)
Q Consensus 82 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~ 161 (555)
|+|++|+|..+....|-+++-|-.|||++|++. .+|+.+..+..|+.|.|++|.+... .+..++.+++|+
T Consensus 131 LNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hf---------QLrQLPsmtsL~ 200 (1255)
T KOG0444|consen 131 LNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHF---------QLRQLPSMTSLS 200 (1255)
T ss_pred EEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHH---------HHhcCccchhhh
Confidence 999999998666667788899999999999997 7888899999999999999987632 222333445566
Q ss_pred EEEccCCcCC-CcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEeccCC
Q 048796 162 SLDLSGNALT-GVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSYND 239 (555)
Q Consensus 162 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~N~ 239 (555)
+|.+++.+-+ ..+|..+..+.+|..+||+.|.+. .+|+.+..+.+|+.|+||+|+|+......-. .+|+.|++|.|+
T Consensus 201 vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQ 279 (1255)
T KOG0444|consen 201 VLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQ 279 (1255)
T ss_pred hhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccch
Confidence 6666655432 245556666666666666666666 5666666666666666666666632221111 456666666666
Q ss_pred CCCCcCccc
Q 048796 240 LSGPIPENL 248 (555)
Q Consensus 240 l~~~~p~~l 248 (555)
++ ..|.++
T Consensus 280 Lt-~LP~av 287 (1255)
T KOG0444|consen 280 LT-VLPDAV 287 (1255)
T ss_pred hc-cchHHH
Confidence 65 334433
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.9e-21 Score=187.11 Aligned_cols=237 Identities=21% Similarity=0.224 Sum_probs=149.3
Q ss_pred EECCCCcCCCCCCCCCC-CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeC-CcCC
Q 048796 13 LNLSSNSLSGTLPTSLK-SCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRN-NSVT 90 (555)
Q Consensus 13 L~Ls~N~l~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~ 90 (555)
.+.++-.|+ .+|..++ .-..|+|..|+|+.++++.|..+++|+.|||+.|+|+.+-|++|.++.+|.+|.+.+ |+|+
T Consensus 51 VdCr~~GL~-eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~ 129 (498)
T KOG4237|consen 51 VDCRGKGLT-EVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT 129 (498)
T ss_pred EEccCCCcc-cCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh
Confidence 444555565 5676665 567888888888888888888888888888888888888888888888887776665 8888
Q ss_pred CCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccC----------CCC--
Q 048796 91 GTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLP----------SYP-- 158 (555)
Q Consensus 91 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~----------~~~-- 158 (555)
......|+++.+|+.|.+.-|++.-...+.|..+++|..|.+-+|.+....-..+..+..+..+. +++
T Consensus 130 ~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wl 209 (498)
T KOG4237|consen 130 DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWL 209 (498)
T ss_pred hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchh
Confidence 77777888888888888888888766777778888888888877777632222332221111100 000
Q ss_pred -------------------------------------CcCEE--EccC-CcCCCcCC-ccccCccccceeecccccccCC
Q 048796 159 -------------------------------------PMESL--DLSG-NALTGVLP-SDIGNMGRLRLLNLANNHLSGK 197 (555)
Q Consensus 159 -------------------------------------~L~~L--~Ls~-N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~ 197 (555)
.++.+ .++. +...+..| ..|..+++|+.|+|++|+|+++
T Consensus 210 a~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i 289 (498)
T KOG4237|consen 210 ADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRI 289 (498)
T ss_pred hhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchh
Confidence 00111 0111 11111222 2355566666666666666666
Q ss_pred CchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccC
Q 048796 198 MPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRN 250 (555)
Q Consensus 198 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~ 250 (555)
-+.+|.++..+++|.|..|+|.......|. ..|+.|++.+|+|++.-|..|..
T Consensus 290 ~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~ 344 (498)
T KOG4237|consen 290 EDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQT 344 (498)
T ss_pred hhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccc
Confidence 666666666666666666666533333333 45666666666666665555443
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.2e-18 Score=187.05 Aligned_cols=218 Identities=28% Similarity=0.381 Sum_probs=117.6
Q ss_pred CCCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCcccc--------------
Q 048796 9 TLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTS-------------- 74 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~-------------- 74 (555)
+|+.|++.+|+|+ .+|..+++|++|+|++|+|+.++. . .++|+.|+|++|.|+ .+|..+.
T Consensus 223 ~L~~L~L~~N~Lt-~LP~lp~~Lk~LdLs~N~LtsLP~-l---p~sL~~L~Ls~N~L~-~Lp~lp~~L~~L~Ls~N~Lt~ 296 (788)
T PRK15387 223 HITTLVIPDNNLT-SLPALPPELRTLEVSGNQLTSLPV-L---PPGLLELSIFSNPLT-HLPALPSGLCKLWIFGNQLTS 296 (788)
T ss_pred CCCEEEccCCcCC-CCCCCCCCCcEEEecCCccCcccC-c---ccccceeeccCCchh-hhhhchhhcCEEECcCCcccc
Confidence 4666666666666 355555666677777766665432 1 224555555555444 2222110
Q ss_pred ---CCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccc
Q 048796 75 ---QFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASEL 151 (555)
Q Consensus 75 ---~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l 151 (555)
.+++|+.|+|++|+|++ +|.. ..+|+.|++++|+|+ .+|. ...+|+.|+|++|+|++ +|.....+..+
T Consensus 297 LP~~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~-~LP~---lp~~Lq~LdLS~N~Ls~-LP~lp~~L~~L 367 (788)
T PRK15387 297 LPVLPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLT-SLPT---LPSGLQELSVSDNQLAS-LPTLPSELYKL 367 (788)
T ss_pred ccccccccceeECCCCcccc-CCCC---cccccccccccCccc-cccc---cccccceEecCCCccCC-CCCCCccccee
Confidence 12344444444444442 1211 112333334444433 1221 11357777777777764 33222111111
Q ss_pred -------cccC-CCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCC
Q 048796 152 -------LVLP-SYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIP 223 (555)
Q Consensus 152 -------~~l~-~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 223 (555)
..++ ...+|+.|+|++|.|++ +|.. .++|+.|++++|.|+. +|.. ..+|+.|++++|+|+ .+|
T Consensus 368 ~Ls~N~L~~LP~l~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP 438 (788)
T PRK15387 368 WAYNNRLTSLPALPSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLP 438 (788)
T ss_pred hhhccccccCcccccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccC
Confidence 0111 11357777777777774 3332 2467778888888774 5543 246777888888887 567
Q ss_pred hhhh--cCCCEEEeccCCCCCCcCccccC
Q 048796 224 DKLS--LKLNEFNVSYNDLSGPIPENLRN 250 (555)
Q Consensus 224 ~~~~--~~L~~L~ls~N~l~~~~p~~l~~ 250 (555)
..+. .+|+.|++++|+|++.+|..+..
T Consensus 439 ~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 439 ESLIHLSSETTVNLEGNPLSERTLQALRE 467 (788)
T ss_pred hHHhhccCCCeEECCCCCCCchHHHHHHH
Confidence 6655 67888888888888887766543
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.1e-18 Score=190.51 Aligned_cols=216 Identities=28% Similarity=0.461 Sum_probs=118.1
Q ss_pred CCCEEECCCCcCCCCCCCCC-CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 9 TLSVLNLSSNSLSGTLPTSL-KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
+...|+|++++++ .+|..+ ++|+.|+|++|+|+.++...+ .+|+.|+|++|.|+ .+|..+. .+|+.|+|++|
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip~~L~~L~Ls~N~LtsLP~~l~---~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N 251 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIPEQITTLILDNNELKSLPENLQ---GNIKTLYANSNQLT-SIPATLP--DTIQEMELSIN 251 (754)
T ss_pred CceEEEeCCCCcC-cCCcccccCCcEEEecCCCCCcCChhhc---cCCCEEECCCCccc-cCChhhh--ccccEEECcCC
Confidence 4556666666666 344433 356666666666665544333 25666666666665 3443332 35666666666
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcc-cccc-------ccccC--CC
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSS-HASE-------LLVLP--SY 157 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~-~~~~-------l~~l~--~~ 157 (555)
++. .+|..+. .+|+.|+|++|+|+ .+|..+. .+|+.|+|++|+|+. +|..+. .+.. +..++ ..
T Consensus 252 ~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp~sL~~L~Ls~N~Lt~LP~~l~ 324 (754)
T PRK15370 252 RIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLPSGITHLNVQSNSLTALPETLP 324 (754)
T ss_pred ccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-CcccchhhHHHHHhcCCccccCCcccc
Confidence 665 3444332 35666666666665 3454332 356666666666653 222111 0000 00000 11
Q ss_pred CCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEecc
Q 048796 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSY 237 (555)
Q Consensus 158 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~ 237 (555)
++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .+|..+ .++|+.|+|++|.|+ .+|..+...|+.|++++
T Consensus 325 ~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt-~LP~~l~~sL~~LdLs~ 397 (754)
T PRK15370 325 PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL--PPTITTLDVSRNALT-NLPENLPAALQIMQASR 397 (754)
T ss_pred ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh--cCCcCEEECCCCcCC-CCCHhHHHHHHHHhhcc
Confidence 456777777777764 444442 56777777777776 355444 256777777777777 45555555677777777
Q ss_pred CCCCCCcCc
Q 048796 238 NDLSGPIPE 246 (555)
Q Consensus 238 N~l~~~~p~ 246 (555)
|+|+ .+|.
T Consensus 398 N~L~-~LP~ 405 (754)
T PRK15370 398 NNLV-RLPE 405 (754)
T ss_pred CCcc-cCch
Confidence 7776 3443
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.9e-21 Score=182.66 Aligned_cols=228 Identities=30% Similarity=0.460 Sum_probs=153.5
Q ss_pred cCCCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccE
Q 048796 5 INSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLST 81 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 81 (555)
.|+..|++|++.+|+++ ..|.+ +..++.|+.++|++..+++.+... .+|..|+.++|.+. .+++.++.+..|+.
T Consensus 65 ~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~-~~l~~l~~s~n~~~-el~~~i~~~~~l~d 141 (565)
T KOG0472|consen 65 KNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLSELPEQIGSL-ISLVKLDCSSNELK-ELPDSIGRLLDLED 141 (565)
T ss_pred hcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHhhccHHHhhh-hhhhhhhcccccee-ecCchHHHHhhhhh
Confidence 34455556666666555 23332 234445666666665444433332 34666666666665 45555666666666
Q ss_pred EEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcC
Q 048796 82 FNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPME 161 (555)
Q Consensus 82 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~ 161 (555)
|+..+|+++ ..|..+..+.+|..|++.+|.+.. .|+..-++..|++|+...|.+. .+|..++.+ .+|+
T Consensus 142 l~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~-l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l---------~~L~ 209 (565)
T KOG0472|consen 142 LDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKA-LPENHIAMKRLKHLDCNSNLLE-TLPPELGGL---------ESLE 209 (565)
T ss_pred hhccccccc-cCchHHHHHHHHHHhhccccchhh-CCHHHHHHHHHHhcccchhhhh-cCChhhcch---------hhhH
Confidence 666666666 455555666666666777776663 3333334777777777777665 566666666 7888
Q ss_pred EEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCC
Q 048796 162 SLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYND 239 (555)
Q Consensus 162 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~ 239 (555)
.|+|..|.|. ..| .|.+|..|++|.++.|.|.-...+....+++|..|||..|+++ ..|+.+- .+|..||+|+|.
T Consensus 210 ~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~ 286 (565)
T KOG0472|consen 210 LLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNND 286 (565)
T ss_pred HHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCc
Confidence 8999999998 455 8999999999999999998444444558999999999999999 6676554 679999999999
Q ss_pred CCCCcCccccCC
Q 048796 240 LSGPIPENLRNF 251 (555)
Q Consensus 240 l~~~~p~~l~~~ 251 (555)
+++ .|..++++
T Consensus 287 is~-Lp~sLgnl 297 (565)
T KOG0472|consen 287 ISS-LPYSLGNL 297 (565)
T ss_pred ccc-CCcccccc
Confidence 996 45555554
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.2e-17 Score=180.44 Aligned_cols=185 Identities=24% Similarity=0.374 Sum_probs=128.0
Q ss_pred CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEc
Q 048796 29 KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDV 108 (555)
Q Consensus 29 ~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L 108 (555)
.+...|+|++++++.++..+. ++|+.|+|++|.|+ .+|..+. .+|++|+|++|+|+ .+|..+. .+|+.|+|
T Consensus 178 ~~~~~L~L~~~~LtsLP~~Ip---~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLTTIPACIP---EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcCcCCcccc---cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 357799999999997664432 47999999999999 5565443 58999999999998 4565443 47999999
Q ss_pred CCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCcccc---------
Q 048796 109 SSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIG--------- 179 (555)
Q Consensus 109 ~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~--------- 179 (555)
++|++. .+|..+. .+|+.|+|++|+|+. +|..+. ++|+.|+|++|+|++. |..+.
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~-----------~sL~~L~Ls~N~Lt~L-P~~lp~sL~~L~Ls 312 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP-----------EELRYLSVYDNSIRTL-PAHLPSGITHLNVQ 312 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccCc-cccccC-----------CCCcEEECCCCccccC-cccchhhHHHHHhc
Confidence 999998 6777664 589999999999984 565332 3566666666666632 22221
Q ss_pred ----------CccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCC
Q 048796 180 ----------NMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSG 242 (555)
Q Consensus 180 ----------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~ 242 (555)
-.++|+.|++++|.++. +|..+. ++|+.|++++|+|+ .+|..+.++|+.|++++|+|+.
T Consensus 313 ~N~Lt~LP~~l~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp~~L~~LdLs~N~Lt~ 381 (754)
T PRK15370 313 SNSLTALPETLPPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLPPTITTLDVSRNALTN 381 (754)
T ss_pred CCccccCCccccccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhcCCcCEEECCCCcCCC
Confidence 11345556666666553 343332 46777777777776 4555555667777777777763
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.7e-17 Score=168.05 Aligned_cols=98 Identities=35% Similarity=0.586 Sum_probs=85.7
Q ss_pred ccccCHHHHhccc-----CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEE
Q 048796 457 SLAFTAEELSRAP-----AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYW 531 (555)
Q Consensus 457 ~~~~~~~~l~~~~-----~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~ 531 (555)
...|+++||..|| .++||+|+||.||+|.+.+|+.||||++.....+..++|.+|+.++++++|||+|+|+|||.
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~ 141 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCL 141 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEe
Confidence 3459999999887 47999999999999999888999999887654431566999999999999999999999999
Q ss_pred cCCCceEEEEEeccCCCChhhhhC
Q 048796 532 GPREQERLLLADYIQGDSLALHLY 555 (555)
Q Consensus 532 ~~~~~~~~lv~e~~~~GsL~~~l~ 555 (555)
+.+. +.+||||||++|+|.++||
T Consensus 142 e~~~-~~~LVYEym~nGsL~d~L~ 164 (361)
T KOG1187|consen 142 EGGE-HRLLVYEYMPNGSLEDHLH 164 (361)
T ss_pred cCCc-eEEEEEEccCCCCHHHHhC
Confidence 7762 3899999999999999987
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.3e-20 Score=179.89 Aligned_cols=218 Identities=30% Similarity=0.421 Sum_probs=187.2
Q ss_pred CCCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 6 NSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
.+..++.|+.++|+++ .+|+. +.+|.+|++++|.+...+++.+... .|+.|+..+|+++ ..|..+..+.+|..|
T Consensus 89 ~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~el~~~i~~~~-~l~dl~~~~N~i~-slp~~~~~~~~l~~l 165 (565)
T KOG0472|consen 89 ELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELKELPDSIGRLL-DLEDLDATNNQIS-SLPEDMVNLSKLSKL 165 (565)
T ss_pred HHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccccceeecCchHHHHh-hhhhhhccccccc-cCchHHHHHHHHHHh
Confidence 3456889999999998 66654 4567899999999998887777666 5999999999999 788888999999999
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCE
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMES 162 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~ 162 (555)
++.+|++....|..+. ++.|++||...|.++ .+|+.++.+.+|..|+|..|.|. ..| .|..+ ..|.+
T Consensus 166 ~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gc---------s~L~E 232 (565)
T KOG0472|consen 166 DLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGC---------SLLKE 232 (565)
T ss_pred hccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCcc---------HHHHH
Confidence 9999999976666666 999999999999997 89999999999999999999998 455 45544 88899
Q ss_pred EEccCCcCCCcCCccc-cCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEeccCCC
Q 048796 163 LDLSGNALTGVLPSDI-GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSYNDL 240 (555)
Q Consensus 163 L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~N~l 240 (555)
|+++.|.|. .+|... ..+++|..|||+.|+++ ..|+.+.-+.+|.+||+|+|.|++ .|..+. ..|+.|-+.+|++
T Consensus 233 lh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~-Lp~sLgnlhL~~L~leGNPl 309 (565)
T KOG0472|consen 233 LHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISS-LPYSLGNLHLKFLALEGNPL 309 (565)
T ss_pred HHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCcccc-CCcccccceeeehhhcCCch
Confidence 999999998 556554 48999999999999999 789999999999999999999994 555555 6789999999998
Q ss_pred CC
Q 048796 241 SG 242 (555)
Q Consensus 241 ~~ 242 (555)
..
T Consensus 310 rT 311 (565)
T KOG0472|consen 310 RT 311 (565)
T ss_pred HH
Confidence 54
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.2e-19 Score=186.07 Aligned_cols=219 Identities=28% Similarity=0.374 Sum_probs=130.8
Q ss_pred CCCCEEECCCCcCCCCCCCCC-CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCC-------------------
Q 048796 8 TTLSVLNLSSNSLSGTLPTSL-KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSG------------------- 67 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~------------------- 67 (555)
.+|+.|+.++|.++...+... .+|+++++++|+++..+ ++...+.+|+.|+..+|+|..
T Consensus 219 ~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~~lp-~wi~~~~nle~l~~n~N~l~~lp~ri~~~~~L~~l~~~~n 297 (1081)
T KOG0618|consen 219 PSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLSNLP-EWIGACANLEALNANHNRLVALPLRISRITSLVSLSAAYN 297 (1081)
T ss_pred cchheeeeccCcceeeccccccccceeeecchhhhhcch-HHHHhcccceEecccchhHHhhHHHHhhhhhHHHHHhhhh
Confidence 345555555555552222222 24555555555555544 444444455555555555531
Q ss_pred ---CCCccccCCCCccEEEeeCCcCCCCCchhcc-------------------------CCCCccEEEcCCCcCCCCCch
Q 048796 68 ---SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLE-------------------------ISPRLVTLDVSSNQLKGPIPD 119 (555)
Q Consensus 68 ---~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~-------------------------~l~~L~~L~L~~N~l~~~~~~ 119 (555)
.+|....+++.|++|+|..|+|....+..+. .++.|+.|++.+|.++...-.
T Consensus 298 el~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p 377 (1081)
T KOG0618|consen 298 ELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFP 377 (1081)
T ss_pred hhhhCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchh
Confidence 4455555566666677766666522221111 113355566666666655555
Q ss_pred hhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCc
Q 048796 120 NFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMP 199 (555)
Q Consensus 120 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 199 (555)
.+.++.+|+.|+|++|+|.......+.+ +..|+.|+||+|.++ .+|..+..+..|++|...+|+|. ..|
T Consensus 378 ~l~~~~hLKVLhLsyNrL~~fpas~~~k---------le~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP 446 (1081)
T KOG0618|consen 378 VLVNFKHLKVLHLSYNRLNSFPASKLRK---------LEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP 446 (1081)
T ss_pred hhccccceeeeeecccccccCCHHHHhc---------hHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech
Confidence 5666667777777777775322222222 366777777777777 55677777777777777777776 566
Q ss_pred hhccCCCCCCEEeCCCCcCCC-CCChhhh-cCCCEEEeccCC
Q 048796 200 SELSKLGALEYLDLSGNQFKG-EIPDKLS-LKLNEFNVSYND 239 (555)
Q Consensus 200 ~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~-~~L~~L~ls~N~ 239 (555)
.+..++.|+.+|++.|+|+. .+|.... ++|++||+++|.
T Consensus 447 -e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 447 -ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred -hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 67788888888998888884 4555555 788889998887
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-16 Score=173.77 Aligned_cols=192 Identities=30% Similarity=0.409 Sum_probs=123.2
Q ss_pred CCCCCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCCCCc----------------ccccCCCCccEEEccCCcCCCCCC
Q 048796 7 STTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDIS----------------DMQNWEANLEILDLSSNKLSGSLP 70 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~----------------~~~~~~~~L~~L~Ls~N~l~~~~~ 70 (555)
.++|++|+|++|+|+. +|..+++|+.|+|++|.|+.++. .+....++|+.|+|++|.|++ +|
T Consensus 241 p~~Lk~LdLs~N~Lts-LP~lp~sL~~L~Ls~N~L~~Lp~lp~~L~~L~Ls~N~Lt~LP~~p~~L~~LdLS~N~L~~-Lp 318 (788)
T PRK15387 241 PPELRTLEVSGNQLTS-LPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLAS-LP 318 (788)
T ss_pred CCCCcEEEecCCccCc-ccCcccccceeeccCCchhhhhhchhhcCEEECcCCccccccccccccceeECCCCcccc-CC
Confidence 4678999999998884 55555566666555555543221 000123579999999999985 34
Q ss_pred ccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhh-----------------CCCCCCeEEcc
Q 048796 71 NLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFF-----------------SSMALTNLNLS 133 (555)
Q Consensus 71 ~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~-----------------~~~~L~~L~Ls 133 (555)
... ..|+.|++++|.|++ +|.. ..+|+.|+|++|+|++ +|.... ...+|+.|+|+
T Consensus 319 ~lp---~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~lp~~L~~L~Ls~N~L~~LP~l~~~L~~LdLs 390 (788)
T PRK15387 319 ALP---SELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTSLPALPSGLKELIVS 390 (788)
T ss_pred CCc---ccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCCCcccceehhhccccccCcccccccceEEec
Confidence 322 234555555555552 2221 1345555555555542 232110 11345566666
Q ss_pred CCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeC
Q 048796 134 GNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDL 213 (555)
Q Consensus 134 ~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 213 (555)
+|.|++ +|.. .++|+.|++++|.|++ +|.. ..+|+.|++++|+|+ .+|..+..+++|+.|+|
T Consensus 391 ~N~Lt~-LP~l------------~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdL 452 (788)
T PRK15387 391 GNRLTS-LPVL------------PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 452 (788)
T ss_pred CCcccC-CCCc------------ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEEC
Confidence 666553 2221 2578999999999995 5543 347889999999999 68999999999999999
Q ss_pred CCCcCCCCCChhh
Q 048796 214 SGNQFKGEIPDKL 226 (555)
Q Consensus 214 s~N~l~~~~p~~~ 226 (555)
++|+|++..+..+
T Consensus 453 s~N~Ls~~~~~~L 465 (788)
T PRK15387 453 EGNPLSERTLQAL 465 (788)
T ss_pred CCCCCCchHHHHH
Confidence 9999999887765
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.2e-19 Score=153.15 Aligned_cols=156 Identities=31% Similarity=0.530 Sum_probs=98.9
Q ss_pred CccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEcc
Q 048796 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLS 133 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls 133 (555)
+++.|.|++|.++ .+|..++.+.+|+.|++++|+|+ .+|..++.+++|+.|+++-|++. .+|..|+.++.|+.|+|.
T Consensus 34 ~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldlt 110 (264)
T KOG0617|consen 34 NITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLT 110 (264)
T ss_pred hhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhcc
Confidence 4566666666665 45555566666666666666665 45555666666666666666665 566666666666666666
Q ss_pred CCcccc-cCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEe
Q 048796 134 GNGFSG-AIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLD 212 (555)
Q Consensus 134 ~N~l~~-~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 212 (555)
+|++.. ..|..|..+ ..|..|+|++|.+. .+|..++.+++|+.|.+..|.+- .+|..++.++.|++|.
T Consensus 111 ynnl~e~~lpgnff~m---------~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelh 179 (264)
T KOG0617|consen 111 YNNLNENSLPGNFFYM---------TTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELH 179 (264)
T ss_pred ccccccccCCcchhHH---------HHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHh
Confidence 666542 334444444 45566666666666 56667777777777777777766 5677777777777777
Q ss_pred CCCCcCCCCCCh
Q 048796 213 LSGNQFKGEIPD 224 (555)
Q Consensus 213 Ls~N~l~~~~p~ 224 (555)
+.+|+++ .+|.
T Consensus 180 iqgnrl~-vlpp 190 (264)
T KOG0617|consen 180 IQGNRLT-VLPP 190 (264)
T ss_pred cccceee-ecCh
Confidence 7777777 4443
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.4e-18 Score=183.34 Aligned_cols=233 Identities=28% Similarity=0.333 Sum_probs=165.8
Q ss_pred CCCcCCCCCCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccE
Q 048796 2 IHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLST 81 (555)
Q Consensus 2 ~~~~n~~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 81 (555)
++..++.+|+.|.+..|.+. .+--.-++|+.|+.++|.++... ..+. ..+|++++++.|+++ .+|+.++.+.+|+.
T Consensus 193 ~dls~~~~l~~l~c~rn~ls-~l~~~g~~l~~L~a~~n~l~~~~-~~p~-p~nl~~~dis~n~l~-~lp~wi~~~~nle~ 268 (1081)
T KOG0618|consen 193 LDLSNLANLEVLHCERNQLS-ELEISGPSLTALYADHNPLTTLD-VHPV-PLNLQYLDISHNNLS-NLPEWIGACANLEA 268 (1081)
T ss_pred hhhhhccchhhhhhhhcccc-eEEecCcchheeeeccCcceeec-cccc-cccceeeecchhhhh-cchHHHHhcccceE
Confidence 45678889999999999997 45556678999999999998332 2222 347999999999999 66799999999999
Q ss_pred EEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccc------------
Q 048796 82 FNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHAS------------ 149 (555)
Q Consensus 82 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~------------ 149 (555)
|...+|+|. .+|..+....+|+.|++..|.+. -+|.......+|+.|+|..|+|....+..+..+.
T Consensus 269 l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~ 346 (1081)
T KOG0618|consen 269 LNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNK 346 (1081)
T ss_pred ecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcc
Confidence 999999996 45555555555555555555554 4444444555555555555555422111111000
Q ss_pred ----------------------------cccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchh
Q 048796 150 ----------------------------ELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSE 201 (555)
Q Consensus 150 ----------------------------~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 201 (555)
.+..+.++++|+.|+|++|+|+......+.++..|++|+|++|+++ .+|+.
T Consensus 347 l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~t 425 (1081)
T KOG0618|consen 347 LSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDT 425 (1081)
T ss_pred ccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHH
Confidence 0111235678888888888888666566778888888888888888 67788
Q ss_pred ccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEeccCCCCC
Q 048796 202 LSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSYNDLSG 242 (555)
Q Consensus 202 ~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~N~l~~ 242 (555)
+..+..|++|....|++. ..|.... +.|+.+|+|.|+|+-
T Consensus 426 va~~~~L~tL~ahsN~l~-~fPe~~~l~qL~~lDlS~N~L~~ 466 (1081)
T KOG0618|consen 426 VANLGRLHTLRAHSNQLL-SFPELAQLPQLKVLDLSCNNLSE 466 (1081)
T ss_pred HHhhhhhHHHhhcCCcee-echhhhhcCcceEEecccchhhh
Confidence 888888888888888888 5664333 789999999999975
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.7e-18 Score=171.39 Aligned_cols=232 Identities=27% Similarity=0.262 Sum_probs=167.8
Q ss_pred CCCCCEEECCCCcCCCC----CCC---CCCCCCEEEcCCCcCCCCC------cccccCCCCccEEEccCCcCCCCCCccc
Q 048796 7 STTLSVLNLSSNSLSGT----LPT---SLKSCVILDLSRNMISGDI------SDMQNWEANLEILDLSSNKLSGSLPNLT 73 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~----~~~---~l~~L~~L~L~~N~l~~~~------~~~~~~~~~L~~L~Ls~N~l~~~~~~~~ 73 (555)
+.+|++|++++|.++.. ++. ..++|++|+++++.+.+.. ...+..+++|+.|+|++|.+.+..+..+
T Consensus 22 l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~ 101 (319)
T cd00116 22 LLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVL 101 (319)
T ss_pred HhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHH
Confidence 35699999999998642 222 3456899999999887311 2345557799999999999986666666
Q ss_pred cCCCC---ccEEEeeCCcCCC----CCchhccCC-CCccEEEcCCCcCCCC----CchhhhCCCCCCeEEccCCcccccC
Q 048796 74 SQFDR---LSTFNIRNNSVTG----TLPSLLEIS-PRLVTLDVSSNQLKGP----IPDNFFSSMALTNLNLSGNGFSGAI 141 (555)
Q Consensus 74 ~~l~~---L~~L~L~~N~l~~----~~~~~l~~l-~~L~~L~L~~N~l~~~----~~~~~~~~~~L~~L~Ls~N~l~~~~ 141 (555)
..+.. |++|++++|++.+ .+...+..+ ++|+.|+|++|.+++. ++..+..+.+|+.|+|++|.+++..
T Consensus 102 ~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 181 (319)
T cd00116 102 ESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAG 181 (319)
T ss_pred HHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHH
Confidence 55555 9999999999883 233455666 8999999999999843 3445667789999999999988522
Q ss_pred CcCccccccccccCCCCCcCEEEccCCcCCCcC----CccccCccccceeecccccccCCCchhcc-----CCCCCCEEe
Q 048796 142 PLRSSHASELLVLPSYPPMESLDLSGNALTGVL----PSDIGNMGRLRLLNLANNHLSGKMPSELS-----KLGALEYLD 212 (555)
Q Consensus 142 p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~ 212 (555)
...+. ..+..+++|++|+|++|.+++.. ...+..+++|+.|++++|.+++.....+. ..+.|+.|+
T Consensus 182 ~~~l~-----~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~ 256 (319)
T cd00116 182 IRALA-----EGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLS 256 (319)
T ss_pred HHHHH-----HHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEE
Confidence 11111 11223379999999999987543 33466788999999999999863333332 237999999
Q ss_pred CCCCcCCCCCC----hhhh--cCCCEEEeccCCCCCC
Q 048796 213 LSGNQFKGEIP----DKLS--LKLNEFNVSYNDLSGP 243 (555)
Q Consensus 213 Ls~N~l~~~~p----~~~~--~~L~~L~ls~N~l~~~ 243 (555)
+++|.++.... ..+. ++|+.+++++|.++..
T Consensus 257 l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 257 LSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEE 293 (319)
T ss_pred ccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHH
Confidence 99999983222 2222 5799999999999854
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-15 Score=175.85 Aligned_cols=236 Identities=25% Similarity=0.333 Sum_probs=119.0
Q ss_pred CCEEECCCCcCCCCCCCCC--CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 10 LSVLNLSSNSLSGTLPTSL--KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
|+.|++.+|.+. .+|..+ .+|+.|+|.+|+|...... +..+++|+.|+|++|.....+|. +..+++|++|+|++|
T Consensus 591 Lr~L~~~~~~l~-~lP~~f~~~~L~~L~L~~s~l~~L~~~-~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c 667 (1153)
T PLN03210 591 LRLLRWDKYPLR-CMPSNFRPENLVKLQMQGSKLEKLWDG-VHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDC 667 (1153)
T ss_pred cEEEEecCCCCC-CCCCcCCccCCcEEECcCccccccccc-cccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCC
Confidence 444444444443 333322 3455555555555433222 23344555555555443333442 444555555555555
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEcc---------------------CCcccccCCcCc-
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLS---------------------GNGFSGAIPLRS- 145 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls---------------------~N~l~~~~p~~~- 145 (555)
.....+|..+..+++|+.|++++|.....+|..+ ++.+|+.|+|+ +|.+. .+|..+
T Consensus 668 ~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~-~lP~~~~ 745 (1153)
T PLN03210 668 SSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIE-EFPSNLR 745 (1153)
T ss_pred CCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccccCCcCeeecCCCccc-ccccccc
Confidence 4333455555555555555555543222344332 34444444444 44433 222211
Q ss_pred -cccccccc-------------------cCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCC
Q 048796 146 -SHASELLV-------------------LPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKL 205 (555)
Q Consensus 146 -~~~~~l~~-------------------l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 205 (555)
.++..+.. ....++|+.|+|++|.....+|..+.++++|+.|+|++|..-+.+|..+ .+
T Consensus 746 l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L 824 (1153)
T PLN03210 746 LENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NL 824 (1153)
T ss_pred ccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-Cc
Confidence 01110000 0012467777777776666677777777777777777765444555544 56
Q ss_pred CCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCCCcCccccCCCC
Q 048796 206 GALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPENLRNFPK 253 (555)
Q Consensus 206 ~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~~~p~~l~~~~~ 253 (555)
++|+.|++++|.....+|.. ..+|+.|++++|.++ .+|.++..++.
T Consensus 825 ~sL~~L~Ls~c~~L~~~p~~-~~nL~~L~Ls~n~i~-~iP~si~~l~~ 870 (1153)
T PLN03210 825 ESLESLDLSGCSRLRTFPDI-STNISDLNLSRTGIE-EVPWWIEKFSN 870 (1153)
T ss_pred cccCEEECCCCCcccccccc-ccccCEeECCCCCCc-cChHHHhcCCC
Confidence 77777777776544444432 246777777777776 35655544443
|
syringae 6; Provisional |
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.4e-18 Score=149.28 Aligned_cols=163 Identities=33% Similarity=0.517 Sum_probs=142.6
Q ss_pred CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEE
Q 048796 28 LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLD 107 (555)
Q Consensus 28 l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 107 (555)
+.+++.|.|++|+++..++.+. .+.+|+.|++++|+|+ .+|..++.++.|+.|+++-|++. ..|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~~vppnia-~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLTVVPPNIA-ELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCceeecCCcHH-Hhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 3467788999999987777655 4557999999999998 78889999999999999999998 8899999999999999
Q ss_pred cCCCcCCC-CCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccce
Q 048796 108 VSSNQLKG-PIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRL 186 (555)
Q Consensus 108 L~~N~l~~-~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 186 (555)
|.+|++.. .+|+.|+.+..|+.|+|++|.+. .+|...+++ ++|+.|.+.+|.+- .+|..++.+..|++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~l---------t~lqil~lrdndll-~lpkeig~lt~lre 177 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKL---------TNLQILSLRDNDLL-SLPKEIGDLTRLRE 177 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhh---------cceeEEeeccCchh-hCcHHHHHHHHHHH
Confidence 99999864 67999999999999999999997 677777777 88999999999988 67899999999999
Q ss_pred eecccccccCCCchhccCC
Q 048796 187 LNLANNHLSGKMPSELSKL 205 (555)
Q Consensus 187 L~L~~N~l~~~~~~~~~~l 205 (555)
|.+++|+++ .+|..++.+
T Consensus 178 lhiqgnrl~-vlppel~~l 195 (264)
T KOG0617|consen 178 LHIQGNRLT-VLPPELANL 195 (264)
T ss_pred Hhcccceee-ecChhhhhh
Confidence 999999999 566665543
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.4e-15 Score=153.41 Aligned_cols=91 Identities=24% Similarity=0.427 Sum_probs=79.6
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEeCCCCEEEEEEeccCChhc-HHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceE
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRH-KKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQER 538 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~-~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~ 538 (555)
|...-|.. ++.||+|.||.|..|+...+..||||.++...... ..+|.+||++|++++|||||+|+|.|..++. +
T Consensus 535 fPRs~L~~--~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DeP--i 610 (807)
T KOG1094|consen 535 FPRSRLRF--KEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDP--L 610 (807)
T ss_pred cchhheeh--hhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCc--h
Confidence 44433433 78999999999999999777999999998765544 5899999999999999999999999998888 9
Q ss_pred EEEEeccCCCChhhhh
Q 048796 539 LLLADYIQGDSLALHL 554 (555)
Q Consensus 539 ~lv~e~~~~GsL~~~l 554 (555)
++|+|||++|+|.++|
T Consensus 611 cmI~EYmEnGDLnqFl 626 (807)
T KOG1094|consen 611 CMITEYMENGDLNQFL 626 (807)
T ss_pred HHHHHHHhcCcHHHHH
Confidence 9999999999999876
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.64 E-value=3e-17 Score=165.54 Aligned_cols=225 Identities=24% Similarity=0.271 Sum_probs=161.1
Q ss_pred EEECCCCcCCCC-CC---CCCCCCCEEEcCCCcCCCCC----cccccCCCCccEEEccCCcCCC------CCCccccCCC
Q 048796 12 VLNLSSNSLSGT-LP---TSLKSCVILDLSRNMISGDI----SDMQNWEANLEILDLSSNKLSG------SLPNLTSQFD 77 (555)
Q Consensus 12 ~L~Ls~N~l~~~-~~---~~l~~L~~L~L~~N~l~~~~----~~~~~~~~~L~~L~Ls~N~l~~------~~~~~~~~l~ 77 (555)
.|+|..+.+++. .. ..+.+|++|++++|.++... .......++|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 578888888742 22 34567999999999986432 3344455679999999998862 2334567788
Q ss_pred CccEEEeeCCcCCCCCchhccCCCC---ccEEEcCCCcCCC----CCchhhhCC-CCCCeEEccCCcccccCCcCccccc
Q 048796 78 RLSTFNIRNNSVTGTLPSLLEISPR---LVTLDVSSNQLKG----PIPDNFFSS-MALTNLNLSGNGFSGAIPLRSSHAS 149 (555)
Q Consensus 78 ~L~~L~L~~N~l~~~~~~~l~~l~~---L~~L~L~~N~l~~----~~~~~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~~~ 149 (555)
+|+.|+|++|.+.+..+..+..+.+ |++|++++|+++. .+...+..+ ++|+.|++++|.+++.....+..
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~-- 159 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK-- 159 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH--
Confidence 9999999999998666666655555 9999999999873 233445566 89999999999988532221111
Q ss_pred cccccCCCCCcCEEEccCCcCCCc----CCccccCccccceeecccccccCCC----chhccCCCCCCEEeCCCCcCCCC
Q 048796 150 ELLVLPSYPPMESLDLSGNALTGV----LPSDIGNMGRLRLLNLANNHLSGKM----PSELSKLGALEYLDLSGNQFKGE 221 (555)
Q Consensus 150 ~l~~l~~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~ 221 (555)
.+..+++|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++.. ...+..+++|++|++++|.+++.
T Consensus 160 ---~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~ 236 (319)
T cd00116 160 ---ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDA 236 (319)
T ss_pred ---HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchH
Confidence 133447899999999999853 2334455679999999999987433 34456788999999999999863
Q ss_pred CChhhh-------cCCCEEEeccCCCC
Q 048796 222 IPDKLS-------LKLNEFNVSYNDLS 241 (555)
Q Consensus 222 ~p~~~~-------~~L~~L~ls~N~l~ 241 (555)
....+. ..|+.|++++|.++
T Consensus 237 ~~~~l~~~~~~~~~~L~~L~l~~n~i~ 263 (319)
T cd00116 237 GAAALASALLSPNISLLTLSLSCNDIT 263 (319)
T ss_pred HHHHHHHHHhccCCCceEEEccCCCCC
Confidence 333221 48999999999987
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-14 Score=169.71 Aligned_cols=226 Identities=22% Similarity=0.266 Sum_probs=150.9
Q ss_pred CCCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 6 NSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
...+|++|+|.+|++.. ++. .+++|+.|+|++|......+. +..+++|+.|+|++|.....+|..+..+++|+.|
T Consensus 609 ~~~~L~~L~L~~s~l~~-L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L 686 (1153)
T PLN03210 609 RPENLVKLQMQGSKLEK-LWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDL 686 (1153)
T ss_pred CccCCcEEECcCccccc-cccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEE
Confidence 45678888888888873 443 466788888887653333333 4456678888888876555777777777888888
Q ss_pred EeeCCcCCCCCchhccCCCC---------------------ccEEEcCCCcCCCCCchhh--------------------
Q 048796 83 NIRNNSVTGTLPSLLEISPR---------------------LVTLDVSSNQLKGPIPDNF-------------------- 121 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~---------------------L~~L~L~~N~l~~~~~~~~-------------------- 121 (555)
++++|.....+|..+ .+++ |+.|+|++|.+. .+|..+
T Consensus 687 ~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~ 764 (1153)
T PLN03210 687 DMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWE 764 (1153)
T ss_pred eCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccccCCcCeeecCCCccc-cccccccccccccccccccchhhccc
Confidence 887764333444332 3344 445555555543 233221
Q ss_pred ----------hCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeeccc
Q 048796 122 ----------FSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLAN 191 (555)
Q Consensus 122 ----------~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 191 (555)
...++|+.|+|++|.....+|..++.+ ++|+.|+|++|..-+.+|..+ .+++|+.|+|++
T Consensus 765 ~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L---------~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~ 834 (1153)
T PLN03210 765 RVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNL---------HKLEHLEIENCINLETLPTGI-NLESLESLDLSG 834 (1153)
T ss_pred cccccchhhhhccccchheeCCCCCCccccChhhhCC---------CCCCEEECCCCCCcCeeCCCC-CccccCEEECCC
Confidence 112367777777776666677666655 899999999986545667665 788999999999
Q ss_pred ccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccC-CCCCCcCccccC
Q 048796 192 NHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYN-DLSGPIPENLRN 250 (555)
Q Consensus 192 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N-~l~~~~p~~l~~ 250 (555)
|..-..+|.. .++|+.|+|++|.++ .+|..+. ++|+.|++++| ++. .+|..+..
T Consensus 835 c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~ 891 (1153)
T PLN03210 835 CSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISK 891 (1153)
T ss_pred CCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCccccc
Confidence 8655455543 468999999999998 6777665 78999999985 454 45544433
|
syringae 6; Provisional |
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.3e-17 Score=160.91 Aligned_cols=238 Identities=24% Similarity=0.252 Sum_probs=196.4
Q ss_pred CCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccC-CcCCCCCCccccCCCCccEEE
Q 048796 8 TTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSS-NKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~ 83 (555)
..-++++|..|.|+.+.+++ +++|++|||++|+|+.+.+++|..+.+|..|-+.+ |+|+......|.++..|+.|.
T Consensus 67 ~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 67 PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 35678999999999655555 45788999999999999999999998888877777 889977778899999999999
Q ss_pred eeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccc------------cCCcCcccc---
Q 048796 84 IRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSG------------AIPLRSSHA--- 148 (555)
Q Consensus 84 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~------------~~p~~~~~~--- 148 (555)
+.-|++.-...+.|..+++|..|.+.+|.+...--..|..+.+++.+.+..|.+-. ..|..++..
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~ 226 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCV 226 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceec
Confidence 99999998888899999999999999999873333377778888888887777220 011111100
Q ss_pred --------------------------------------ccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecc
Q 048796 149 --------------------------------------SELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLA 190 (555)
Q Consensus 149 --------------------------------------~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 190 (555)
.....+..+++|+.|+|++|.|+++.+.+|.+...|++|.|.
T Consensus 227 ~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~ 306 (498)
T KOG4237|consen 227 SPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLT 306 (498)
T ss_pred chHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcC
Confidence 011235678999999999999999999999999999999999
Q ss_pred cccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcC
Q 048796 191 NNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 191 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p 245 (555)
.|+|...-...|.++..|+.|+|.+|+|+...|..|. .+|..|++-.|++.|.+-
T Consensus 307 ~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~ 363 (498)
T KOG4237|consen 307 RNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCR 363 (498)
T ss_pred cchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccc
Confidence 9999877777899999999999999999988888887 689999999999988654
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.8e-15 Score=144.26 Aligned_cols=84 Identities=23% Similarity=0.323 Sum_probs=75.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
...||+|+||.||+|++ .++..||||.+... .+...+....|+.++++++|||||.++.+++.++. +|+|||||.
T Consensus 15 ~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~--i~lVMEyC~ 92 (429)
T KOG0595|consen 15 SREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDF--IYLVMEYCN 92 (429)
T ss_pred hhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCe--EEEEEEeCC
Confidence 55699999999999998 67899999999665 45557778999999999999999999999999888 999999999
Q ss_pred CCChhhhhC
Q 048796 547 GDSLALHLY 555 (555)
Q Consensus 547 ~GsL~~~l~ 555 (555)
+|+|.++|+
T Consensus 93 gGDLs~yi~ 101 (429)
T KOG0595|consen 93 GGDLSDYIR 101 (429)
T ss_pred CCCHHHHHH
Confidence 999999885
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.3e-14 Score=151.75 Aligned_cols=94 Identities=21% Similarity=0.363 Sum_probs=81.7
Q ss_pred cccCHHHHhcccCCeeecCCceEEEEEEe------CCCCEEEEEEeccCChh-cHHHHHHHHHHHHcCCCCcceeeeEEE
Q 048796 458 LAFTAEELSRAPAEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRAYY 530 (555)
Q Consensus 458 ~~~~~~~l~~~~~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~~-~~~~~~~ei~~l~~l~H~niv~l~g~~ 530 (555)
..|+..+++. .+.||+|.||+||+|+. .+-+.||||.++..... ..++|++|+++++.++|||||+|+|.|
T Consensus 481 ~~i~r~~i~~--~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC 558 (774)
T KOG1026|consen 481 LEIPRSDIVF--KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVC 558 (774)
T ss_pred eEechhheee--hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE
Confidence 3477777766 77899999999999995 23457999999876554 689999999999999999999999999
Q ss_pred EcCCCceEEEEEeccCCCChhhhhC
Q 048796 531 WGPREQERLLLADYIQGDSLALHLY 555 (555)
Q Consensus 531 ~~~~~~~~~lv~e~~~~GsL~~~l~ 555 (555)
..++. .++|+|||..|||.++|.
T Consensus 559 ~~~~P--~~MvFEYm~~GDL~eFLr 581 (774)
T KOG1026|consen 559 REGDP--LCMVFEYMDHGDLHEFLR 581 (774)
T ss_pred ccCCe--eEEEEEecccccHHHHHH
Confidence 99888 999999999999999874
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.3e-13 Score=146.14 Aligned_cols=108 Identities=35% Similarity=0.533 Sum_probs=87.6
Q ss_pred CcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEec
Q 048796 159 PMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVS 236 (555)
Q Consensus 159 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls 236 (555)
.++.|+|++|.+++.+|..+..+++|+.|+|++|.|+|.+|..+..+++|+.|||++|+|++.+|..+. .+|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 377889999999998998899999999999999999988998899999999999999999998888776 789999999
Q ss_pred cCCCCCCcCccccCCCC--CC-CCCCCcccccC
Q 048796 237 YNDLSGPIPENLRNFPK--SS-FHPGNALLIFP 266 (555)
Q Consensus 237 ~N~l~~~~p~~l~~~~~--~~-~~~~n~~~~~~ 266 (555)
+|+++|.+|..+..... .. ...+|+.+|..
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~ 531 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGI 531 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCC
Confidence 99999999887654221 11 12367666753
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.3e-13 Score=137.24 Aligned_cols=91 Identities=32% Similarity=0.510 Sum_probs=76.5
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEeCCCCE-EEEEEeccCChh--cHHHHHHHHHHHHcCCCCcceeeeEEEEcCC-C
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATLDSGHM-LTVKWLRVGLVR--HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR-E 535 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~~~g~~-vavK~l~~~~~~--~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~-~ 535 (555)
++.+++.. .+.+|+|+||+||+|.| .|+. ||||++...... ..++|.+|+.+|.+++|||||+++|+|.+.. .
T Consensus 38 i~~~~l~~--~~~iG~G~~g~V~~~~~-~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~ 114 (362)
T KOG0192|consen 38 IDPDELPI--EEVLGSGSFGTVYKGKW-RGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGS 114 (362)
T ss_pred cChHHhhh--hhhcccCCceeEEEEEe-CCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 45555554 66799999999999999 4566 999999754322 2568999999999999999999999999876 5
Q ss_pred ceEEEEEeccCCCChhhhhC
Q 048796 536 QERLLLADYIQGDSLALHLY 555 (555)
Q Consensus 536 ~~~~lv~e~~~~GsL~~~l~ 555 (555)
..+|+|||++|+|.++||
T Consensus 115 --~~iVtEy~~~GsL~~~l~ 132 (362)
T KOG0192|consen 115 --LCIVTEYMPGGSLSVLLH 132 (362)
T ss_pred --eEEEEEeCCCCcHHHHHh
Confidence 899999999999999885
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.2e-13 Score=135.51 Aligned_cols=91 Identities=21% Similarity=0.330 Sum_probs=80.3
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEE
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 539 (555)
+..++|.. .+.||+|.||.||.|.|.....||||.++.... ..++|.+|+.+|.+++|+|||+++|+|..++. ++
T Consensus 203 i~r~~l~l--~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m-~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~p--iy 277 (468)
T KOG0197|consen 203 IPREELKL--IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM-SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEP--IY 277 (468)
T ss_pred ecHHHHHH--HHHhcCCccceEEEEEEcCCCcccceEEecccc-ChhHHHHHHHHHHhCcccCeEEEEEEEecCCc--eE
Confidence 66666666 778999999999999996666899999987643 46889999999999999999999999998777 99
Q ss_pred EEEeccCCCChhhhhC
Q 048796 540 LLADYIQGDSLALHLY 555 (555)
Q Consensus 540 lv~e~~~~GsL~~~l~ 555 (555)
||+|||++|+|.++|+
T Consensus 278 IVtE~m~~GsLl~yLr 293 (468)
T KOG0197|consen 278 IVTEYMPKGSLLDYLR 293 (468)
T ss_pred EEEEecccCcHHHHhh
Confidence 9999999999999884
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.8e-14 Score=145.33 Aligned_cols=170 Identities=27% Similarity=0.400 Sum_probs=97.7
Q ss_pred CEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCC
Q 048796 32 VILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSN 111 (555)
Q Consensus 32 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 111 (555)
...||+.|++..++.++ ..+..|+.|.|..|.|. .+|..++++..|+.|+|+.|+++ .+|..+..++ |+.|-+++|
T Consensus 78 ~~aDlsrNR~~elp~~~-~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNN 153 (722)
T KOG0532|consen 78 VFADLSRNRFSELPEEA-CAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNN 153 (722)
T ss_pred hhhhccccccccCchHH-HHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecC
Confidence 35566666665443222 22234666666666665 55666666666666666666665 4555555554 666666666
Q ss_pred cCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeeccc
Q 048796 112 QLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLAN 191 (555)
Q Consensus 112 ~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 191 (555)
+++ .+|+.++....|..|+.+.|.+. .+|..++.+ .+|+.|++..|++.. +|..++.+ .|..||++.
T Consensus 154 kl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l---------~slr~l~vrRn~l~~-lp~El~~L-pLi~lDfSc 220 (722)
T KOG0532|consen 154 KLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYL---------TSLRDLNVRRNHLED-LPEELCSL-PLIRLDFSC 220 (722)
T ss_pred ccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhH---------HHHHHHHHhhhhhhh-CCHHHhCC-ceeeeeccc
Confidence 665 55666665566666666666665 334334433 555666666666653 34444433 356666666
Q ss_pred ccccCCCchhccCCCCCCEEeCCCCcCC
Q 048796 192 NHLSGKMPSELSKLGALEYLDLSGNQFK 219 (555)
Q Consensus 192 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 219 (555)
|+++ .+|-.|..|..|++|-|.+|.|.
T Consensus 221 Nkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 221 NKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred Ccee-ecchhhhhhhhheeeeeccCCCC
Confidence 6666 46666666666666666666666
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.7e-12 Score=132.99 Aligned_cols=84 Identities=26% Similarity=0.366 Sum_probs=72.8
Q ss_pred CCeeecCCceEEEEEEe--CCC--CE-EEEEEecc---CChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL--DSG--HM-LTVKWLRV---GLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--~~g--~~-vavK~l~~---~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|++ .++ .. ||||.... ......++|++|.++|+.++|||||+++|++....+ +|+|
T Consensus 162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P--l~iv 239 (474)
T KOG0194|consen 162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP--LMLV 239 (474)
T ss_pred cceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc--cEEE
Confidence 68999999999999997 333 23 89998874 234557899999999999999999999999988777 9999
Q ss_pred EeccCCCChhhhhC
Q 048796 542 ADYIQGDSLALHLY 555 (555)
Q Consensus 542 ~e~~~~GsL~~~l~ 555 (555)
||+|.||+|.++|.
T Consensus 240 mEl~~gGsL~~~L~ 253 (474)
T KOG0194|consen 240 MELCNGGSLDDYLK 253 (474)
T ss_pred EEecCCCcHHHHHH
Confidence 99999999999874
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.9e-12 Score=123.00 Aligned_cols=94 Identities=26% Similarity=0.425 Sum_probs=82.0
Q ss_pred cccCHHHHhcccCCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC
Q 048796 458 LAFTAEELSRAPAEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE 535 (555)
Q Consensus 458 ~~~~~~~l~~~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~ 535 (555)
..++..||++ ...||+|..|+|||+.+ ++++.+|+|.+..... ...+++.+|++++.+++||+||.++|.|.....
T Consensus 74 ~~i~~~dle~--~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~ 151 (364)
T KOG0581|consen 74 NGISLSDLER--LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE 151 (364)
T ss_pred cccCHHHhhh--hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc
Confidence 3478889988 88999999999999998 6899999999955433 347889999999999999999999999987763
Q ss_pred ceEEEEEeccCCCChhhhh
Q 048796 536 QERLLLADYIQGDSLALHL 554 (555)
Q Consensus 536 ~~~~lv~e~~~~GsL~~~l 554 (555)
+..++||||++|+|++++
T Consensus 152 -~isI~mEYMDgGSLd~~~ 169 (364)
T KOG0581|consen 152 -EISICMEYMDGGSLDDIL 169 (364)
T ss_pred -eEEeehhhcCCCCHHHHH
Confidence 499999999999999875
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.8e-12 Score=135.27 Aligned_cols=84 Identities=23% Similarity=0.493 Sum_probs=74.7
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
+++||.|.||.||+|+++ ....||||.++.+.. +.+.+|..|..+|++++||||++|.|+...... ++||.||
T Consensus 634 e~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~P--vMIiTEy 711 (996)
T KOG0196|consen 634 EKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKP--VMIITEY 711 (996)
T ss_pred EEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCce--eEEEhhh
Confidence 679999999999999982 245799999987644 457899999999999999999999999988877 9999999
Q ss_pred cCCCChhhhhC
Q 048796 545 IQGDSLALHLY 555 (555)
Q Consensus 545 ~~~GsL~~~l~ 555 (555)
|+||+|+.+|+
T Consensus 712 MENGsLDsFLR 722 (996)
T KOG0196|consen 712 MENGSLDSFLR 722 (996)
T ss_pred hhCCcHHHHHh
Confidence 99999999874
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.8e-12 Score=123.46 Aligned_cols=83 Identities=19% Similarity=0.437 Sum_probs=71.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh-------cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR-------HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~-------~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.|-+|.. .+|+.||||.++..... ......+|+++|.+++|||||++.+++...+. .|+|
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds--~YmV 254 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS--SYMV 254 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc--eEEE
Confidence 67899999999999987 78999999999642111 12235799999999999999999999998887 8999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
+|||+||+|.+.+
T Consensus 255 lE~v~GGeLfd~v 267 (475)
T KOG0615|consen 255 LEYVEGGELFDKV 267 (475)
T ss_pred EEEecCccHHHHH
Confidence 9999999999865
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.3e-12 Score=118.81 Aligned_cols=93 Identities=23% Similarity=0.411 Sum_probs=80.7
Q ss_pred cccCHHHHhcccCCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC
Q 048796 458 LAFTAEELSRAPAEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP 533 (555)
Q Consensus 458 ~~~~~~~l~~~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~ 533 (555)
..++++|++. ++.||+|.||.||.|+. .++-.||+|++.... .+..+++.+||++-+.++||||+++++++.+.
T Consensus 17 ~~~~l~dfei--gr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~ 94 (281)
T KOG0580|consen 17 KTWTLDDFEI--GRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS 94 (281)
T ss_pred cccchhhccc--cccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc
Confidence 3477777776 99999999999999998 577889999995432 23468899999999999999999999999988
Q ss_pred CCceEEEEEeccCCCChhhhh
Q 048796 534 REQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 534 ~~~~~~lv~e~~~~GsL~~~l 554 (555)
.. .||++||.++|+++..|
T Consensus 95 ~r--iyLilEya~~gel~k~L 113 (281)
T KOG0580|consen 95 KR--IYLILEYAPRGELYKDL 113 (281)
T ss_pred ce--eEEEEEecCCchHHHHH
Confidence 87 99999999999998876
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.1e-13 Score=139.64 Aligned_cols=168 Identities=33% Similarity=0.491 Sum_probs=87.8
Q ss_pred cEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCC
Q 048796 56 EILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGN 135 (555)
Q Consensus 56 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N 135 (555)
...||+.|++. .+|..++.+..|+.+.|..|.+. .+|..+..+..|+.|||+.|+++ .+|..++.++ |+.|-+++|
T Consensus 78 ~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNN 153 (722)
T KOG0532|consen 78 VFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNN 153 (722)
T ss_pred hhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecC
Confidence 44555555555 45555555555555555555555 45555555555555555555554 4444444442 555555555
Q ss_pred cccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCC
Q 048796 136 GFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSG 215 (555)
Q Consensus 136 ~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 215 (555)
+++ .+|..++.+ ++|..|+.+.|.+. .+|..++++.+|+.|++..|++. .+|..+..++ |..||+++
T Consensus 154 kl~-~lp~~ig~~---------~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfSc 220 (722)
T KOG0532|consen 154 KLT-SLPEEIGLL---------PTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSC 220 (722)
T ss_pred ccc-cCCcccccc---------hhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeeccc
Confidence 554 344444433 45555555555555 34445555555555555555555 3444444332 55555555
Q ss_pred CcCCCCCChhhh--cCCCEEEeccCCCC
Q 048796 216 NQFKGEIPDKLS--LKLNEFNVSYNDLS 241 (555)
Q Consensus 216 N~l~~~~p~~~~--~~L~~L~ls~N~l~ 241 (555)
|+++ .+|..|. ..|++|-|.+|+|.
T Consensus 221 Nkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 221 NKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred Ccee-ecchhhhhhhhheeeeeccCCCC
Confidence 5555 4444444 44555555555554
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.7e-12 Score=125.45 Aligned_cols=84 Identities=24% Similarity=0.368 Sum_probs=70.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.|||++. .+|+.||+|+++... .....-..+||.+|++++||||++|.+...+.....+|||+|||+
T Consensus 122 i~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMd 201 (560)
T KOG0600|consen 122 IEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMD 201 (560)
T ss_pred HHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEeccc
Confidence 56899999999999996 789999999996554 334566789999999999999999999987663334999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+ +|..++
T Consensus 202 h-DL~GLl 208 (560)
T KOG0600|consen 202 H-DLSGLL 208 (560)
T ss_pred c-hhhhhh
Confidence 8 776554
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.27 E-value=5.4e-12 Score=131.20 Aligned_cols=197 Identities=36% Similarity=0.530 Sum_probs=145.0
Q ss_pred EEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCC-CccEEEeeCCcCCCCCchhccCCCCccEEEcCCC
Q 048796 33 ILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFD-RLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSN 111 (555)
Q Consensus 33 ~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 111 (555)
.|+++.|.+.......... +.++.|++.+|.++ .++.....+. +|+.|++++|.+. .++..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~~~~~~~-~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNISELLEL-TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCchhhhcc-cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 5778888775444333322 56888888888888 5666666664 8888888888888 55566788888889999988
Q ss_pred cCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeeccc
Q 048796 112 QLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLAN 191 (555)
Q Consensus 112 ~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 191 (555)
+++ .+|........|+.|++++|++. .+|...... ..|+.|.+++|.+. ..+..+..+.++..+.+.+
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~---------~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~ 241 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELL---------SALEELDLSNNSII-ELLSSLSNLKNLSGLELSN 241 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhh---------hhhhhhhhcCCcce-ecchhhhhcccccccccCC
Confidence 887 56666667888888889888887 344332222 45888888888644 3456677888888888888
Q ss_pred ccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCcc
Q 048796 192 NHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPEN 247 (555)
Q Consensus 192 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~ 247 (555)
|++.. .+..++.+++++.|++++|.++...+ +. .+++.|++++|.+....|..
T Consensus 242 n~~~~-~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 242 NKLED-LPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred ceeee-ccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchhh
Confidence 88873 46777888889999999998885444 33 68889999999888766654
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.27 E-value=5.4e-12 Score=131.18 Aligned_cols=199 Identities=33% Similarity=0.456 Sum_probs=144.1
Q ss_pred EEECCCCcCCCCCCC--CCCCCCEEEcCCCcCCCCCcccccCC-CCccEEEccCCcCCCCCCccccCCCCccEEEeeCCc
Q 048796 12 VLNLSSNSLSGTLPT--SLKSCVILDLSRNMISGDISDMQNWE-ANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS 88 (555)
Q Consensus 12 ~L~Ls~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~~-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 88 (555)
.|++..|.+...+.. .+..++.|++.+|.++.+.+.. ... .+|+.|++++|.+. .+|..+..+++|+.|++++|+
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~~i~~~~-~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~ 174 (394)
T COG4886 97 SLDLNLNRLRSNISELLELTNLTSLDLDNNNITDIPPLI-GLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFND 174 (394)
T ss_pred eeeccccccccCchhhhcccceeEEecCCcccccCcccc-ccchhhcccccccccchh-hhhhhhhccccccccccCCch
Confidence 577777777433332 3456888899998888665433 333 26889999999888 555667888889999999999
Q ss_pred CCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCC
Q 048796 89 VTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGN 168 (555)
Q Consensus 89 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N 168 (555)
+. .++.....++.|+.|++++|++. .+|........|+.|.+++|.+. ..+..+..+ .++..|.+.+|
T Consensus 175 l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~---------~~l~~l~l~~n 242 (394)
T COG4886 175 LS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNL---------KNLSGLELSNN 242 (394)
T ss_pred hh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhc---------ccccccccCCc
Confidence 88 55555557788888999999887 67766666667888888888532 222233333 67777778888
Q ss_pred cCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh
Q 048796 169 ALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS 227 (555)
Q Consensus 169 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 227 (555)
++.. .+..+..+++|+.|++++|.++...+ ++.+.+|+.|++++|.++...|....
T Consensus 243 ~~~~-~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 243 KLED-LPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred eeee-ccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhhc
Confidence 8774 35677788888999999998885433 77888899999999988877666544
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.5e-11 Score=125.83 Aligned_cols=83 Identities=23% Similarity=0.408 Sum_probs=75.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
+++||+|+|+.||.++. .+|..||+|.+.... ....+...+||++.+.++|||||++++++++.+. +|+|.|+|
T Consensus 23 g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~n--VYivLELC 100 (592)
T KOG0575|consen 23 GRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNN--VYIVLELC 100 (592)
T ss_pred eeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCc--eEEEEEec
Confidence 88999999999999997 899999999996532 2346789999999999999999999999999888 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 101 ~~~sL~el~ 109 (592)
T KOG0575|consen 101 HRGSLMELL 109 (592)
T ss_pred CCccHHHHH
Confidence 999998775
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.5e-11 Score=135.28 Aligned_cols=84 Identities=30% Similarity=0.460 Sum_probs=73.5
Q ss_pred CCeeecCCceEEEEEEe--CCCC----EEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL--DSGH----MLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--~~g~----~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|.||.||+|.+ ..|. .||||.+... ..+...+|.+|..+|++++|||||+++|+|.+... .+|++
T Consensus 697 ~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~--~~i~l 774 (1025)
T KOG1095|consen 697 LRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP--PLILL 774 (1025)
T ss_pred eeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC--cEEEe
Confidence 67899999999999997 2343 4999999765 44567899999999999999999999999998776 99999
Q ss_pred eccCCCChhhhhC
Q 048796 543 DYIQGDSLALHLY 555 (555)
Q Consensus 543 e~~~~GsL~~~l~ 555 (555)
|||++|+|..+|+
T Consensus 775 eyM~gGDL~sflr 787 (1025)
T KOG1095|consen 775 EYMEGGDLLSFLR 787 (1025)
T ss_pred hhcccCcHHHHHH
Confidence 9999999999874
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.3e-12 Score=127.47 Aligned_cols=83 Identities=22% Similarity=0.305 Sum_probs=75.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||-|.||.||.|+| +....||||.++...+ ..++|..|..+|..++|||+|+|+|+|..... .|||.|||.+|
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpP--FYIiTEfM~yG 348 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP--FYIITEFMCYG 348 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCC--eEEEEecccCc
Confidence 67899999999999999 5678899999987665 46899999999999999999999999987777 89999999999
Q ss_pred ChhhhhC
Q 048796 549 SLALHLY 555 (555)
Q Consensus 549 sL~~~l~ 555 (555)
+|.++|+
T Consensus 349 NLLdYLR 355 (1157)
T KOG4278|consen 349 NLLDYLR 355 (1157)
T ss_pred cHHHHHH
Confidence 9999984
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.3e-11 Score=131.43 Aligned_cols=110 Identities=34% Similarity=0.627 Sum_probs=100.8
Q ss_pred CCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCC
Q 048796 127 LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLG 206 (555)
Q Consensus 127 L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 206 (555)
++.|+|++|.+.|.+|..++.+ ++|+.|+|++|.+++.+|..+..+++|+.|+|++|+++|.+|..++.++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L---------~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~ 490 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKL---------RHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLT 490 (623)
T ss_pred EEEEECCCCCccccCCHHHhCC---------CCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCC
Confidence 7889999999999999887776 8999999999999999999999999999999999999999999999999
Q ss_pred CCCEEeCCCCcCCCCCChhhh---cCCCEEEeccCCCCCCcC
Q 048796 207 ALEYLDLSGNQFKGEIPDKLS---LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 207 ~L~~L~Ls~N~l~~~~p~~~~---~~L~~L~ls~N~l~~~~p 245 (555)
+|+.|+|++|.++|.+|..+. .++..+++.+|...|..|
T Consensus 491 ~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 491 SLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CCCEEECcCCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 999999999999999998876 356789999998766444
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.7e-11 Score=117.14 Aligned_cols=97 Identities=11% Similarity=0.210 Sum_probs=80.3
Q ss_pred cccCHHHHhcccCCeeecCCceEEEEEEeCCCCEEEEEEeccCChhc---HHHHHHHHHHHHcCCCCcceeeeEEEEc--
Q 048796 458 LAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRH---KKEFAKEVKKIGSMRHPNIVPLRAYYWG-- 532 (555)
Q Consensus 458 ~~~~~~~l~~~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~---~~~~~~ei~~l~~l~H~niv~l~g~~~~-- 532 (555)
..++.+|+...+...||+|++|.||+|.+ +|+.||||.++...... .+.|.+|+.+|.+++||||++++|++.+
T Consensus 13 ~~i~~~~i~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~ 91 (283)
T PHA02988 13 KCIESDDIDKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV 91 (283)
T ss_pred eecCHHHcCCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc
Confidence 34788888776668999999999999999 78999999996543322 4678899999999999999999999876
Q ss_pred CCCceEEEEEeccCCCChhhhhC
Q 048796 533 PREQERLLLADYIQGDSLALHLY 555 (555)
Q Consensus 533 ~~~~~~~lv~e~~~~GsL~~~l~ 555 (555)
.+....++||||+++|+|.++++
T Consensus 92 ~~~~~~~lv~Ey~~~g~L~~~l~ 114 (283)
T PHA02988 92 DDLPRLSLILEYCTRGYLREVLD 114 (283)
T ss_pred cCCCceEEEEEeCCCCcHHHHHh
Confidence 32223899999999999998863
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.3e-12 Score=126.57 Aligned_cols=134 Identities=23% Similarity=0.230 Sum_probs=66.2
Q ss_pred cCCCCCCEEECCCCcCCCC----CCCCCCCCCEEEcCCCcCCCCC--cccccCCCCccEEEccCCcCCCCCCcc-ccCCC
Q 048796 5 INSTTLSVLNLSSNSLSGT----LPTSLKSCVILDLSRNMISGDI--SDMQNWEANLEILDLSSNKLSGSLPNL-TSQFD 77 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~----~~~~l~~L~~L~L~~N~l~~~~--~~~~~~~~~L~~L~Ls~N~l~~~~~~~-~~~l~ 77 (555)
.|+++|++..|.++..... ....+++++.|||+.|-+.... ..+...+++|+.|+|+.|.+....... -..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 3455666666666655421 1123556666666666555332 234445556666666666654222111 12345
Q ss_pred CccEEEeeCCcCCCC-CchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCccc
Q 048796 78 RLSTFNIRNNSVTGT-LPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 78 ~L~~L~L~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
+|+.|.|+.|.|+.. +...+..+|+|+.|+|..|............+..|+.|+|++|++.
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li 259 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI 259 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc
Confidence 566666666666521 2223445566666666665322222223333445555555555554
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.6e-11 Score=119.51 Aligned_cols=81 Identities=22% Similarity=0.337 Sum_probs=67.4
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHc--CCCCcceeeeEEEEcCC--CceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGS--MRHPNIVPLRAYYWGPR--EQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~--l~H~niv~l~g~~~~~~--~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|.| .|..||||.+... +.+.+.+|-++-.. ++|+||+.+++.-..+. .+++|||.||.
T Consensus 216 ~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYH 291 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYH 291 (513)
T ss_pred EEEecCccccceeeccc-cCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecc
Confidence 67899999999999999 6899999998653 34667778777765 69999999998764332 34599999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|||+|+|
T Consensus 292 e~GSL~DyL 300 (513)
T KOG2052|consen 292 EHGSLYDYL 300 (513)
T ss_pred cCCcHHHHH
Confidence 999999997
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.17 E-value=8.3e-12 Score=131.00 Aligned_cols=84 Identities=23% Similarity=0.275 Sum_probs=72.2
Q ss_pred cCCeeecCCceEEEEEEe-CCCC----EEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 469 PAEVLGRSSHGTLYKATL-DSGH----MLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 469 ~~~~lG~G~~g~vy~~~~-~~g~----~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
...+||+|+||+||||.| +.|. +||+|.+... ..+..++|..|+-+|++++|||+++|+|+|..+. +.||.
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~---~qlvt 776 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST---LQLVT 776 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch---HHHHH
Confidence 378999999999999998 5554 6899988654 3345789999999999999999999999998754 78999
Q ss_pred eccCCCChhhhhC
Q 048796 543 DYIQGDSLALHLY 555 (555)
Q Consensus 543 e~~~~GsL~~~l~ 555 (555)
+||+.|+|.++++
T Consensus 777 q~mP~G~LlDyvr 789 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVR 789 (1177)
T ss_pred HhcccchHHHHHH
Confidence 9999999999874
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.3e-11 Score=109.40 Aligned_cols=105 Identities=33% Similarity=0.463 Sum_probs=29.8
Q ss_pred CccEEEccCCcCCCCCCcccc-CCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhh-hCCCCCCeEE
Q 048796 54 NLEILDLSSNKLSGSLPNLTS-QFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNF-FSSMALTNLN 131 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~-~~~~~L~~L~ 131 (555)
++++|+|.+|.|+. +. .++ .+.+|+.|+|++|.|+.. +.+..+++|++|++++|+|+ .+...+ ..+++|+.|+
T Consensus 20 ~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS----S-CHHHHHH-TT--EEE
T ss_pred cccccccccccccc-cc-chhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEE
Confidence 46667777777662 32 233 456677777777777643 23556677777777777776 333333 3466777777
Q ss_pred ccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCC
Q 048796 132 LSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT 171 (555)
Q Consensus 132 Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~ 171 (555)
|++|+|... .++..+..+++|++|+|.+|.++
T Consensus 95 L~~N~I~~l--------~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 95 LSNNKISDL--------NELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TTS---SC--------CCCGGGGG-TT--EEE-TT-GGG
T ss_pred CcCCcCCCh--------HHhHHHHcCCCcceeeccCCccc
Confidence 777766521 12222333455666666666555
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.8e-10 Score=113.12 Aligned_cols=81 Identities=26% Similarity=0.371 Sum_probs=66.6
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHH--cCCCCcceeeeEEEEcCC--CceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIG--SMRHPNIVPLRAYYWGPR--EQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~--~l~H~niv~l~g~~~~~~--~~~~~lv~e~~ 545 (555)
.+++|+|+||.||||.+ +++.||||++... ..+.|.+|-.+.+ .++|+||++++++-.... .-+.+||+||.
T Consensus 215 ~eli~~Grfg~V~KaqL-~~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh 290 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQL-DNRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFH 290 (534)
T ss_pred HHHhhcCccceeehhhc-cCceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeec
Confidence 56899999999999999 6799999998753 4567888877765 568999999998764433 11489999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.++|
T Consensus 291 ~kGsL~dyL 299 (534)
T KOG3653|consen 291 PKGSLCDYL 299 (534)
T ss_pred cCCcHHHHH
Confidence 999999987
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.7e-12 Score=121.97 Aligned_cols=230 Identities=25% Similarity=0.283 Sum_probs=150.1
Q ss_pred CCCCCCEEECCCCcCCCCCC-------CCCCCCCEEEcCCCcCCCCC----cc-------cccCCCCccEEEccCCcCCC
Q 048796 6 NSTTLSVLNLSSNSLSGTLP-------TSLKSCVILDLSRNMISGDI----SD-------MQNWEANLEILDLSSNKLSG 67 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~-------~~l~~L~~L~L~~N~l~~~~----~~-------~~~~~~~L~~L~Ls~N~l~~ 67 (555)
...+++.|+|++|.|...-. ...++|+..++++= ++|.. +. .....++|++||||+|-+..
T Consensus 28 ~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~ 106 (382)
T KOG1909|consen 28 PMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGP 106 (382)
T ss_pred ccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCc
Confidence 34678889999998863211 23456777777642 22221 11 12234479999999998864
Q ss_pred CCCc----cccCCCCccEEEeeCCcCCCCCch-------------hccCCCCccEEEcCCCcCCCC----CchhhhCCCC
Q 048796 68 SLPN----LTSQFDRLSTFNIRNNSVTGTLPS-------------LLEISPRLVTLDVSSNQLKGP----IPDNFFSSMA 126 (555)
Q Consensus 68 ~~~~----~~~~l~~L~~L~L~~N~l~~~~~~-------------~l~~l~~L~~L~L~~N~l~~~----~~~~~~~~~~ 126 (555)
..+. .+..+..|++|+|.+|.+...... ....-+.|+++...+|++... +...|...+.
T Consensus 107 ~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~ 186 (382)
T KOG1909|consen 107 KGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPT 186 (382)
T ss_pred cchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccc
Confidence 4333 345678899999999888632221 234457889999999988632 2335556778
Q ss_pred CCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCc----CCccccCccccceeecccccccCCCchhc
Q 048796 127 LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGV----LPSDIGNMGRLRLLNLANNHLSGKMPSEL 202 (555)
Q Consensus 127 L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 202 (555)
|+.+.++.|.|....-.. -...+..+++|++|||.+|.|+.. +...++.+++|+.|++++|.+......+|
T Consensus 187 leevr~~qN~I~~eG~~a-----l~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~ 261 (382)
T KOG1909|consen 187 LEEVRLSQNGIRPEGVTA-----LAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAF 261 (382)
T ss_pred cceEEEecccccCchhHH-----HHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHH
Confidence 889999888876221100 112344558899999999988743 23456678889999999998875544443
Q ss_pred -----cCCCCCCEEeCCCCcCCCCCChhh----h--cCCCEEEeccCCCC
Q 048796 203 -----SKLGALEYLDLSGNQFKGEIPDKL----S--LKLNEFNVSYNDLS 241 (555)
Q Consensus 203 -----~~l~~L~~L~Ls~N~l~~~~p~~~----~--~~L~~L~ls~N~l~ 241 (555)
...++|+.|.+.+|.++..-...+ . +.|..|+|++|.+.
T Consensus 262 ~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 262 VDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 246889999999998884322211 1 67888899988883
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.4e-11 Score=118.11 Aligned_cols=83 Identities=20% Similarity=0.394 Sum_probs=73.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhc---HHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRH---KKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~---~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|.||+|-++.. ..|+.||||.++.....+ .--+.+||++|+.++||||+.++.+|+..+. ..|||||.
T Consensus 58 ~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdK--IvivMEYa 135 (668)
T KOG0611|consen 58 TETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDK--IVIVMEYA 135 (668)
T ss_pred HHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCce--EEEEEEec
Confidence 56899999999999986 789999999997654443 3447899999999999999999999998887 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
.+|+|++++
T Consensus 136 S~GeLYDYi 144 (668)
T KOG0611|consen 136 SGGELYDYI 144 (668)
T ss_pred CCccHHHHH
Confidence 999999987
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.13 E-value=7.6e-11 Score=112.27 Aligned_cols=84 Identities=18% Similarity=0.351 Sum_probs=70.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhc--HHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRH--KKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~--~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.|++|+||.||+|+. .+++.||+|+++...... .-.-.+||.++.+++|||||.+..+....+.++.|+|||||+
T Consensus 81 lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~E 160 (419)
T KOG0663|consen 81 LNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVE 160 (419)
T ss_pred HhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHH
Confidence 67899999999999997 688999999997543221 334589999999999999999999988776666999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
. +|..++
T Consensus 161 h-DLksl~ 167 (419)
T KOG0663|consen 161 H-DLKSLM 167 (419)
T ss_pred h-hHHHHH
Confidence 8 787765
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.13 E-value=8.5e-11 Score=108.66 Aligned_cols=82 Identities=23% Similarity=0.465 Sum_probs=70.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhc--HHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRH--KKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~--~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.+|+|.||.||+|+. .+|+.||||+++.+...+ .....+||+.++.++|+||+.|+.++-..+. +.||+|||+
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~--l~lVfEfm~ 84 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSN--LSLVFEFMP 84 (318)
T ss_pred hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCc--eEEEEEecc
Confidence 56899999999999996 789999999998764433 4567899999999999999999999987776 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
. +|+..|
T Consensus 85 t-dLe~vI 91 (318)
T KOG0659|consen 85 T-DLEVVI 91 (318)
T ss_pred c-cHHHHh
Confidence 7 776554
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.13 E-value=6.9e-12 Score=123.28 Aligned_cols=187 Identities=24% Similarity=0.239 Sum_probs=132.4
Q ss_pred cCCCCCCEEECCCCcCCCC-----CCCCCCCCCEEEcCCCcCCCCC-cccccCCCCccEEEccCCcCCC-CCCccccCCC
Q 048796 5 INSTTLSVLNLSSNSLSGT-----LPTSLKSCVILDLSRNMISGDI-SDMQNWEANLEILDLSSNKLSG-SLPNLTSQFD 77 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~-----~~~~l~~L~~L~L~~N~l~~~~-~~~~~~~~~L~~L~Ls~N~l~~-~~~~~~~~l~ 77 (555)
-+|++++.|||+.|-|... +.+.|++|+.|+|+.|++.... ...-..+++|+.|.|++|.++. .+......++
T Consensus 143 k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fP 222 (505)
T KOG3207|consen 143 KILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFP 222 (505)
T ss_pred hhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCC
Confidence 4689999999999988853 3367999999999999997543 2223356789999999999983 2334556789
Q ss_pred CccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCc--hhhhCCCCCCeEEccCCcccccCCcCccccccccccC
Q 048796 78 RLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIP--DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLP 155 (555)
Q Consensus 78 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~--~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~ 155 (555)
+|+.|+|..|...........-+..|+.|||++|++. ..+ ...+.++.|..|+++.+.+....-. ....+....
T Consensus 223 sl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~---d~~s~~kt~ 298 (505)
T KOG3207|consen 223 SLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEP---DVESLDKTH 298 (505)
T ss_pred cHHHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhhhhccccCcchhcCC---Cccchhhhc
Confidence 9999999999644344445566788999999999986 334 4567788999999999988743211 111122233
Q ss_pred CCCCcCEEEccCCcCCCc-CCccccCccccceeeccccccc
Q 048796 156 SYPPMESLDLSGNALTGV-LPSDIGNMGRLRLLNLANNHLS 195 (555)
Q Consensus 156 ~~~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~ 195 (555)
.+++|++|++..|+|... .-..+..+++|+.|.+..|.|+
T Consensus 299 ~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 299 TFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred ccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 457888888888887532 1123445566677777777665
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.6e-11 Score=107.42 Aligned_cols=106 Identities=28% Similarity=0.300 Sum_probs=32.3
Q ss_pred CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcC
Q 048796 30 SCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVS 109 (555)
Q Consensus 30 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 109 (555)
++++|+|.+|.|+.+. .+...+.+|+.|+|++|.|+. ++ .+..++.|++|++++|+|+...+.....+++|++|+|+
T Consensus 20 ~~~~L~L~~n~I~~Ie-~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L~ 96 (175)
T PF14580_consen 20 KLRELNLRGNQISTIE-NLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYLS 96 (175)
T ss_dssp -----------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S-CHHHHHH-TT--EEE-T
T ss_pred cccccccccccccccc-chhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCccccchHHhCCcCCEEECc
Confidence 4566666666666432 333344567777777777763 22 35566777777777777764322222356777777777
Q ss_pred CCcCCCCC-chhhhCCCCCCeEEccCCccc
Q 048796 110 SNQLKGPI-PDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 110 ~N~l~~~~-~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
+|+|...- -..+..+++|+.|+|.+|.+.
T Consensus 97 ~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 97 NNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp TS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 77775321 234556777777777777765
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.1e-11 Score=113.42 Aligned_cols=81 Identities=22% Similarity=0.304 Sum_probs=68.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
-..+|+|+||.||||+. .+|+.||||++... .+.-.+-.++||++++.++|+|+|.|+.+|..... ++||+|||+
T Consensus 7 LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrk--lhLVFE~~d 84 (396)
T KOG0593|consen 7 LGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRK--LHLVFEYCD 84 (396)
T ss_pred hhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcce--eEEEeeecc
Confidence 34799999999999998 67999999999543 23346678999999999999999999999988777 999999999
Q ss_pred CCChhh
Q 048796 547 GDSLAL 552 (555)
Q Consensus 547 ~GsL~~ 552 (555)
.--|++
T Consensus 85 hTvL~e 90 (396)
T KOG0593|consen 85 HTVLHE 90 (396)
T ss_pred hHHHHH
Confidence 854443
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.5e-10 Score=120.09 Aligned_cols=84 Identities=21% Similarity=0.232 Sum_probs=70.8
Q ss_pred CCeeecCCceEEEEEEeC------CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv 541 (555)
.++||+|+||.||+|+.. .+..||||++..... ...+.|.+|+.+++++. ||||++++++|...+. .++|
T Consensus 42 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~--~~lv 119 (400)
T cd05105 42 GRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP--IYII 119 (400)
T ss_pred hheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc--eEEE
Confidence 789999999999999851 134699999965332 33567999999999996 9999999999987776 9999
Q ss_pred EeccCCCChhhhhC
Q 048796 542 ADYIQGDSLALHLY 555 (555)
Q Consensus 542 ~e~~~~GsL~~~l~ 555 (555)
||||++|+|.++|+
T Consensus 120 ~Ey~~~g~L~~~l~ 133 (400)
T cd05105 120 TEYCFYGDLVNYLH 133 (400)
T ss_pred EEecCCCcHHHHHH
Confidence 99999999998873
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.12 E-value=8.9e-11 Score=119.94 Aligned_cols=89 Identities=29% Similarity=0.441 Sum_probs=77.3
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEeCCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCce
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQE 537 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~ 537 (555)
+..+|++. .+.||+|+||+||+|+|. | .||||.+..... ...+.|.+|+.++++.||.||+=+.|||+.++
T Consensus 389 Ip~~ev~l--~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~--- 461 (678)
T KOG0193|consen 389 IPPEEVLL--GERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP--- 461 (678)
T ss_pred cCHHHhhc--cceeccccccceeecccc-c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc---
Confidence 56677766 789999999999999994 3 699999976543 34688999999999999999999999999754
Q ss_pred EEEEEeccCCCChhhhhC
Q 048796 538 RLLLADYIQGDSLALHLY 555 (555)
Q Consensus 538 ~~lv~e~~~~GsL~~~l~ 555 (555)
.+||..+|+|-+|+.+||
T Consensus 462 ~AIiTqwCeGsSLY~hlH 479 (678)
T KOG0193|consen 462 LAIITQWCEGSSLYTHLH 479 (678)
T ss_pred eeeeehhccCchhhhhcc
Confidence 699999999999999997
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.7e-10 Score=119.02 Aligned_cols=91 Identities=25% Similarity=0.335 Sum_probs=74.5
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEe------CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEE
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYW 531 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~ 531 (555)
|..+++.. .+.||+|+||.||+|++ .++..||||.++... ....+.+.+|+.++..+ +||||++++++|.
T Consensus 32 ~~~~~~~~--~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~ 109 (375)
T cd05104 32 FPRNRLSF--GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACT 109 (375)
T ss_pred cchHHeeh--hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence 33444444 78999999999999973 245689999986432 23456789999999999 8999999999998
Q ss_pred cCCCceEEEEEeccCCCChhhhh
Q 048796 532 GPREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 532 ~~~~~~~~lv~e~~~~GsL~~~l 554 (555)
..+. .++|||||++|+|.+++
T Consensus 110 ~~~~--~~lv~E~~~~g~L~~~l 130 (375)
T cd05104 110 VGGP--TLVITEYCCYGDLLNFL 130 (375)
T ss_pred cCCc--ceeeehhccCCcHHHHH
Confidence 8777 99999999999999876
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.4e-11 Score=120.34 Aligned_cols=82 Identities=24% Similarity=0.422 Sum_probs=72.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||||+- .+++.||+|.+.+..+ +..+...+|++++++++|||||.++..|++..+ +|+|.||+.
T Consensus 7 ~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~--~~vVte~a~ 84 (808)
T KOG0597|consen 7 YEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAH--LWVVTEYAV 84 (808)
T ss_pred HHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccce--EEEEehhhh
Confidence 46799999999999986 5788999999965433 446789999999999999999999999998887 999999998
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
| +|+.+|
T Consensus 85 g-~L~~il 91 (808)
T KOG0597|consen 85 G-DLFTIL 91 (808)
T ss_pred h-hHHHHH
Confidence 8 998876
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.7e-11 Score=114.88 Aligned_cols=177 Identities=20% Similarity=0.317 Sum_probs=79.4
Q ss_pred CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCC---CCC--------------------ccccCCCCccEEE
Q 048796 27 SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSG---SLP--------------------NLTSQFDRLSTFN 83 (555)
Q Consensus 27 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~---~~~--------------------~~~~~l~~L~~L~ 83 (555)
.|++|..+.++.+.-..+. ++...-+.|+.+...+.-+.. .+| ..+.....|++|+
T Consensus 212 ~f~~l~~~~~s~~~~~~i~-~~~~~kptl~t~~v~~s~~~~~~~l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~LtelD 290 (490)
T KOG1259|consen 212 AFRNLKTLKFSALSTENIV-DIELLKPTLQTICVHNTTIQDVPSLLPETILADPSGSEPSTSNGSALVSADTWQELTELD 290 (490)
T ss_pred Hhhhhheeeeeccchhhee-ceeecCchhheeeeecccccccccccchhhhcCccCCCCCccCCceEEecchHhhhhhcc
Confidence 3567777777776543222 222223446666655544431 111 1111223455555
Q ss_pred eeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEE
Q 048796 84 IRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESL 163 (555)
Q Consensus 84 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L 163 (555)
|++|.|+ .+.++...+|.++.|++++|.|. . -+.+..+++|+.|+|++|.++. +..+-.+ +.+++.|
T Consensus 291 LS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~-v~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~K---------LGNIKtL 357 (490)
T KOG1259|consen 291 LSGNLIT-QIDESVKLAPKLRRLILSQNRIR-T-VQNLAELPQLQLLDLSGNLLAE-CVGWHLK---------LGNIKTL 357 (490)
T ss_pred ccccchh-hhhhhhhhccceeEEecccccee-e-ehhhhhcccceEeecccchhHh-hhhhHhh---------hcCEeee
Confidence 5555555 44444555555555555555554 1 1224445555555555555441 1111111 1344455
Q ss_pred EccCCcCCCcCCccccCccccceeecccccccCC-CchhccCCCCCCEEeCCCCcCC
Q 048796 164 DLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGK-MPSELSKLGALEYLDLSGNQFK 219 (555)
Q Consensus 164 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~ 219 (555)
.|++|.|... ..+..+-+|..||+++|+|... -...++++|.|+.|.|.+|.+.
T Consensus 358 ~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 358 KLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred ehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 5555544422 2334444445555555554321 1123344444444444444444
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.3e-10 Score=117.62 Aligned_cols=92 Identities=23% Similarity=0.265 Sum_probs=75.3
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEeC------CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCC-CCcceeeeEEEE
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMR-HPNIVPLRAYYW 531 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~-H~niv~l~g~~~ 531 (555)
+..+++.. .+.||+|+||.||+|++. .+..||||+++.... ...+.+.+|+.++.++. ||||++++++|.
T Consensus 34 ~~~~~~~~--~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 34 MPRDNLVL--GRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ecHHHeeh--hhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 44445544 789999999999999852 346799999975432 22457899999999997 999999999998
Q ss_pred cCCCceEEEEEeccCCCChhhhhC
Q 048796 532 GPREQERLLLADYIQGDSLALHLY 555 (555)
Q Consensus 532 ~~~~~~~~lv~e~~~~GsL~~~l~ 555 (555)
..+. .++|+||+++|+|.++|+
T Consensus 112 ~~~~--~~iv~E~~~~g~L~~~l~ 133 (401)
T cd05107 112 KGGP--IYIITEYCRYGDLVDYLH 133 (401)
T ss_pred cCCC--cEEEEeccCCCcHHHHHH
Confidence 8776 999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.5e-10 Score=110.85 Aligned_cols=83 Identities=23% Similarity=0.436 Sum_probs=71.4
Q ss_pred CCeeecCCceEEEEEEe----CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL----DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|.+ ..+..+|+|.++.... ...+.|.+|+..+++++||||+++++++...+. .++||||
T Consensus 10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~ 87 (266)
T cd05064 10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNT--MMIVTEY 87 (266)
T ss_pred eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCC--cEEEEEe
Confidence 67899999999999986 2356899999876432 335679999999999999999999999988777 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 88 ~~~~~L~~~l 97 (266)
T cd05064 88 MSNGALDSFL 97 (266)
T ss_pred CCCCcHHHHH
Confidence 9999999876
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.09 E-value=7.5e-11 Score=121.95 Aligned_cols=91 Identities=23% Similarity=0.350 Sum_probs=76.6
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEe--CCCC--EEEEEEeccCChh-cHHHHHHHHHHHHcCCCCcceeeeEEEEcCC
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATL--DSGH--MLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR 534 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~--~~g~--~vavK~l~~~~~~-~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~ 534 (555)
+-.++|.. .++||+|.||.|++|.| +.|+ .||||+++..... ...+|.+|+.+|-+++|||+++|||...++
T Consensus 107 Ipee~i~l--~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q- 183 (1039)
T KOG0199|consen 107 IPEEQIKL--YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ- 183 (1039)
T ss_pred ccHHHHHH--HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc-
Confidence 44445544 78899999999999998 4554 5899999765543 578999999999999999999999999874
Q ss_pred CceEEEEEeccCCCChhhhhC
Q 048796 535 EQERLLLADYIQGDSLALHLY 555 (555)
Q Consensus 535 ~~~~~lv~e~~~~GsL~~~l~ 555 (555)
. .++|+|.++.|+|.+.||
T Consensus 184 p--~mMV~ELaplGSLldrLr 202 (1039)
T KOG0199|consen 184 P--AMMVFELAPLGSLLDRLR 202 (1039)
T ss_pred h--hhHHhhhcccchHHHHHh
Confidence 4 799999999999999885
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.7e-10 Score=109.15 Aligned_cols=83 Identities=17% Similarity=0.296 Sum_probs=72.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||++++.++..+|+|.+.... ...++|.+|+.++++++||||+++++++...+. .++||||+++|+
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~iv~e~~~~~~ 85 (256)
T cd05114 9 MKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKP--LYIVTEFMENGC 85 (256)
T ss_pred eeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCC--EEEEEEcCCCCc
Confidence 57899999999999998777889999886432 235679999999999999999999999988777 999999999999
Q ss_pred hhhhhC
Q 048796 550 LALHLY 555 (555)
Q Consensus 550 L~~~l~ 555 (555)
|.++++
T Consensus 86 L~~~~~ 91 (256)
T cd05114 86 LLNYLR 91 (256)
T ss_pred HHHHHH
Confidence 998763
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.4e-10 Score=110.69 Aligned_cols=83 Identities=25% Similarity=0.479 Sum_probs=73.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||+||.++. .+++.+|+|.+++... ...+...+|..++.+++||.||++...+++.+. +|+|+||+
T Consensus 30 lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~k--LylVld~~ 107 (357)
T KOG0598|consen 30 LKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEK--LYLVLDYL 107 (357)
T ss_pred eeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCe--EEEEEecc
Confidence 78999999999999986 6799999999976433 235668899999999999999999999998877 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
.||+|..+|
T Consensus 108 ~GGeLf~hL 116 (357)
T KOG0598|consen 108 NGGELFYHL 116 (357)
T ss_pred CCccHHHHH
Confidence 999999887
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.6e-10 Score=111.36 Aligned_cols=84 Identities=29% Similarity=0.474 Sum_probs=69.3
Q ss_pred CCeeecCCceEEEEEEeC-----CCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATLD-----SGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-----~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|.||.||+|++. .+..|+||.+... .....++|.+|+..+++++||||++++|+|...+. .++|+|
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~--~~lv~e 81 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEP--LFLVME 81 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSS--EEEEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccc--cccccc
Confidence 467999999999999984 3568999999653 33347889999999999999999999999996666 999999
Q ss_pred ccCCCChhhhhC
Q 048796 544 YIQGDSLALHLY 555 (555)
Q Consensus 544 ~~~~GsL~~~l~ 555 (555)
|+++|+|.++|+
T Consensus 82 ~~~~g~L~~~L~ 93 (259)
T PF07714_consen 82 YCPGGSLDDYLK 93 (259)
T ss_dssp --TTEBHHHHHH
T ss_pred cccccccccccc
Confidence 999999998863
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.2e-10 Score=113.36 Aligned_cols=83 Identities=24% Similarity=0.395 Sum_probs=72.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.++.+++||||+++++++...+. .++||||+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~ 100 (329)
T PTZ00263 23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENR--VYFLLEFV 100 (329)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCE--EEEEEcCC
Confidence 67899999999999997 578999999986432 1234678999999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 101 ~~~~L~~~l 109 (329)
T PTZ00263 101 VGGELFTHL 109 (329)
T ss_pred CCChHHHHH
Confidence 999998875
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.4e-10 Score=113.54 Aligned_cols=83 Identities=19% Similarity=0.329 Sum_probs=72.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhc---HHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRH---KKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~---~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
-.+||+|+||.||.|+- .+|..+|+|++++..... .+-...|-.+|...++|+||+|+..+.+.+. +||||||+
T Consensus 146 Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~--LYLiMEyl 223 (550)
T KOG0605|consen 146 LKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEY--LYLIMEYL 223 (550)
T ss_pred heeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCe--eEEEEEec
Confidence 67999999999999996 689999999997654432 3457788899999999999999999998888 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+||++..+|
T Consensus 224 PGGD~mTLL 232 (550)
T KOG0605|consen 224 PGGDMMTLL 232 (550)
T ss_pred CCccHHHHH
Confidence 999998766
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.1e-10 Score=111.28 Aligned_cols=83 Identities=22% Similarity=0.376 Sum_probs=74.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhc-HHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRH-KKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~-~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.++||.|..++||+|+. +.+..||||++..+.... .+...+|+..|+.++||||++++..|..+.. +|+||.||.+
T Consensus 31 ~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~--LWvVmpfMa~ 108 (516)
T KOG0582|consen 31 QEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSE--LWVVMPFMAG 108 (516)
T ss_pred EEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecce--eEEeehhhcC
Confidence 67899999999999997 788999999997765544 4889999999999999999999999888777 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|++.+++
T Consensus 109 GS~ldIi 115 (516)
T KOG0582|consen 109 GSLLDII 115 (516)
T ss_pred CcHHHHH
Confidence 9999876
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.06 E-value=8.3e-10 Score=110.46 Aligned_cols=83 Identities=24% Similarity=0.389 Sum_probs=70.4
Q ss_pred CCeeecCCceEEEEEEeC-----------------CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD-----------------SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYW 531 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-----------------~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~ 531 (555)
.+.||+|+||.||+|++. ++..||+|.+..... ....+|.+|+.++.+++||||+++++++.
T Consensus 10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 89 (304)
T cd05096 10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCV 89 (304)
T ss_pred eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe
Confidence 678999999999999852 234699999875432 23567999999999999999999999998
Q ss_pred cCCCceEEEEEeccCCCChhhhh
Q 048796 532 GPREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 532 ~~~~~~~~lv~e~~~~GsL~~~l 554 (555)
..+. .++||||+++|+|.+++
T Consensus 90 ~~~~--~~lv~e~~~~~~L~~~l 110 (304)
T cd05096 90 DEDP--LCMITEYMENGDLNQFL 110 (304)
T ss_pred cCCc--eEEEEecCCCCcHHHHH
Confidence 8776 99999999999998875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.9e-11 Score=113.72 Aligned_cols=85 Identities=21% Similarity=0.388 Sum_probs=70.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.++||+|+||.|||+.. .+|..+|.|.++-+ ..+..+++..|+.+++.++|||||++++.-...+.+-++||||||.
T Consensus 24 l~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~ 103 (375)
T KOG0591|consen 24 LKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCD 103 (375)
T ss_pred HHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhc
Confidence 67899999999999985 79999999999643 3345778999999999999999999998432222212789999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
.|+|.+.|
T Consensus 104 ~GDLsqmI 111 (375)
T KOG0591|consen 104 AGDLSQMI 111 (375)
T ss_pred ccCHHHHH
Confidence 99999876
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.05 E-value=5.9e-10 Score=115.38 Aligned_cols=83 Identities=19% Similarity=0.226 Sum_probs=72.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+.++.+++|+||+++++++.+.+. .++||||+
T Consensus 6 ~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~--~~lv~E~~ 83 (381)
T cd05626 6 IKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDN--LYFVMDYI 83 (381)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCE--EEEEEecC
Confidence 56899999999999987 678999999996532 2234678999999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~gg~L~~~l 92 (381)
T cd05626 84 PGGDMMSLL 92 (381)
T ss_pred CCCcHHHHH
Confidence 999998876
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.04 E-value=4.5e-10 Score=114.24 Aligned_cols=84 Identities=24% Similarity=0.368 Sum_probs=69.2
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.++||+|+||.||+|.. .++..||||.+..... ...+.+.+|+.++..+ +||||++++++|...+. ..++|
T Consensus 12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~-~~~lv 90 (338)
T cd05102 12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG-PLMVI 90 (338)
T ss_pred eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC-ceEEE
Confidence 78999999999999974 2356899999865432 3356799999999999 89999999999875432 38999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 91 ~ey~~~g~L~~~l 103 (338)
T cd05102 91 VEFCKYGNLSNFL 103 (338)
T ss_pred EecCCCCcHHHHH
Confidence 9999999999876
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.9e-11 Score=127.59 Aligned_cols=214 Identities=29% Similarity=0.298 Sum_probs=99.5
Q ss_pred CCCCEEECCCCcCCCCC--CCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEee
Q 048796 8 TTLSVLNLSSNSLSGTL--PTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIR 85 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~--~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 85 (555)
..++.+++..|.+.... ...+.+|..|++.+|+|..+... ...+.+|++|+|++|.|+...+ +..++.|+.|+++
T Consensus 72 ~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~~-l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~ 148 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKIENL-LSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLS 148 (414)
T ss_pred HhHHhhccchhhhhhhhcccccccceeeeeccccchhhcccc-hhhhhcchheeccccccccccc--hhhccchhhheec
Confidence 44455555555555311 23455555666666665543221 3344456666666666553222 3344445666666
Q ss_pred CCcCCCCCchhccCCCCccEEEcCCCcCCCCCc-hhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEE
Q 048796 86 NNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIP-DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164 (555)
Q Consensus 86 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~ 164 (555)
+|.|... ..+..+..|+.+++++|++...-+ . ...+.+|+.+++.+|.+...-. +. .+..+..++
T Consensus 149 ~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~~--~~---------~~~~l~~~~ 214 (414)
T KOG0531|consen 149 GNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIEG--LD---------LLKKLVLLS 214 (414)
T ss_pred cCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcccc--hH---------HHHHHHHhh
Confidence 6665532 223335556666666666552222 1 3445555555555555542111 11 112333345
Q ss_pred ccCCcCCCcCCccccCcc--ccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCC
Q 048796 165 LSGNALTGVLPSDIGNMG--RLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLS 241 (555)
Q Consensus 165 Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~ 241 (555)
+..|.++..-+ +..+. .|+.+++++|++. ..+..+..+..+..||+.+|++...........+..+....|.+.
T Consensus 215 l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 215 LLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLEGLERLPKLSELWLNDNKLA 290 (414)
T ss_pred cccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhccccccccccccchHHHhccCcchhc
Confidence 55555553311 11222 2556666666655 222344455555666666665553332222233444444444443
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.2e-10 Score=115.92 Aligned_cols=83 Identities=18% Similarity=0.290 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe--C-CCC--EEEEEEecc-CChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL--D-SGH--MLTVKWLRV-GLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--~-~g~--~vavK~l~~-~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.++||+|.||.||+|++ + .|. .||||..+. ....+.+.|..|..+|+.++|||||+|+|+|.+.. .|+|||
T Consensus 394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P---~WivmE 470 (974)
T KOG4257|consen 394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP---MWIVME 470 (974)
T ss_pred HHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc---eeEEEe
Confidence 78999999999999997 2 343 588898765 34455789999999999999999999999998754 799999
Q ss_pred ccCCCChhhhhC
Q 048796 544 YIQGDSLALHLY 555 (555)
Q Consensus 544 ~~~~GsL~~~l~ 555 (555)
.++-|.|..+|.
T Consensus 471 L~~~GELr~yLq 482 (974)
T KOG4257|consen 471 LAPLGELREYLQ 482 (974)
T ss_pred cccchhHHHHHH
Confidence 999999998873
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.9e-11 Score=113.36 Aligned_cols=129 Identities=27% Similarity=0.314 Sum_probs=107.3
Q ss_pred CCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEc
Q 048796 53 ANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNL 132 (555)
Q Consensus 53 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L 132 (555)
+.|+.|||++|.|+ .+.++..-++.++.|+++.|.|... . .+..+++|+.|||++|.++ .+.++-..+.+++.|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v-~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV-Q-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeee-h-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 36999999999998 6777888899999999999999844 3 3889999999999999997 55566667889999999
Q ss_pred cCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcC-CccccCccccceeecccccccC
Q 048796 133 SGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVL-PSDIGNMGRLRLLNLANNHLSG 196 (555)
Q Consensus 133 s~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~ 196 (555)
+.|.|.. ++ .+..+-+|..||+++|+|.... ...+++++.|+++.|.+|.|.+
T Consensus 360 a~N~iE~-----LS------GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 360 AQNKIET-----LS------GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhhhHhh-----hh------hhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 9998862 22 2334478899999999998532 3568999999999999999985
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.5e-09 Score=108.42 Aligned_cols=90 Identities=22% Similarity=0.397 Sum_probs=75.3
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCce
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQE 537 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~ 537 (555)
..++|+.. .+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.+++.++|+||+++++++...+.
T Consensus 71 ~~~~~~~~--~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-- 146 (353)
T PLN00034 71 KSLSELER--VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGE-- 146 (353)
T ss_pred CCHHHHhh--hhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCe--
Confidence 45556655 67899999999999997 5789999999864432 335679999999999999999999999987766
Q ss_pred EEEEEeccCCCChhhh
Q 048796 538 RLLLADYIQGDSLALH 553 (555)
Q Consensus 538 ~~lv~e~~~~GsL~~~ 553 (555)
.++||||+++|+|.+.
T Consensus 147 ~~lv~e~~~~~~L~~~ 162 (353)
T PLN00034 147 IQVLLEFMDGGSLEGT 162 (353)
T ss_pred EEEEEecCCCCccccc
Confidence 9999999999998653
|
|
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.03 E-value=7e-10 Score=114.66 Aligned_cols=83 Identities=18% Similarity=0.288 Sum_probs=71.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+|+.||||.+.... ....+.+.+|+.++..++||||+++++++.+.+. .|+||||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~--~~lv~E~~ 83 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQY--LYLIMEFL 83 (377)
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCe--eEEEEeCC
Confidence 57899999999999987 678999999985432 2234568899999999999999999999998777 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~gg~L~~~l 92 (377)
T cd05629 84 PGGDLMTML 92 (377)
T ss_pred CCCcHHHHH
Confidence 999998876
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.9e-11 Score=113.23 Aligned_cols=81 Identities=23% Similarity=0.369 Sum_probs=72.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.|||+.. ..|..+|+|.+.... +.+++..||.+|..++.+++|++||.|..... +|+|||||--|
T Consensus 38 ~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sD--LWIVMEYCGAG 113 (502)
T KOG0574|consen 38 VGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSD--LWIVMEYCGAG 113 (502)
T ss_pred HHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCc--eEeehhhcCCC
Confidence 67899999999999987 689999999987654 46889999999999999999999999987655 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+..+++
T Consensus 114 SiSDI~ 119 (502)
T KOG0574|consen 114 SISDIM 119 (502)
T ss_pred cHHHHH
Confidence 998875
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.02 E-value=5.4e-10 Score=114.94 Aligned_cols=83 Identities=22% Similarity=0.344 Sum_probs=72.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.++..++||||+++++++...+. .++||||+
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~--~~lv~E~~ 83 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENY--LYLIMEYL 83 (364)
T ss_pred EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCe--EEEEECCC
Confidence 57899999999999997 578999999996432 2234568899999999999999999999998777 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~~g~L~~~l 92 (364)
T cd05599 84 PGGDMMTLL 92 (364)
T ss_pred CCcHHHHHH
Confidence 999998876
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.02 E-value=7.5e-10 Score=112.80 Aligned_cols=83 Identities=24% Similarity=0.443 Sum_probs=73.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh---cHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR---HKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|.||.||+++. .+|+.+|+|.+...... ..+.+.+|+.+|..+. |||||.+.+.+.+... .++|||+
T Consensus 40 ~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~--~~lvmEL 117 (382)
T KOG0032|consen 40 GRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS--VYLVMEL 117 (382)
T ss_pred hhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe--EEEEEEe
Confidence 67899999999999997 46999999999654432 3468999999999998 9999999999998877 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
++||+|.+.|
T Consensus 118 ~~GGeLfd~i 127 (382)
T KOG0032|consen 118 CEGGELFDRI 127 (382)
T ss_pred cCCchHHHHH
Confidence 9999999876
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.8e-10 Score=117.18 Aligned_cols=83 Identities=22% Similarity=0.370 Sum_probs=74.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
-..||+|+.|.||.+.- .+++.||||++........+-..+|+.+|+..+|+|||.++..|+..++ +|+|||||++|
T Consensus 278 ~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~de--LWVVMEym~gg 355 (550)
T KOG0578|consen 278 FKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDE--LWVVMEYMEGG 355 (550)
T ss_pred hhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccce--eEEEEeecCCC
Confidence 45799999999999985 6889999999987766667778999999999999999999999988776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+.+
T Consensus 356 sLTDvV 361 (550)
T KOG0578|consen 356 SLTDVV 361 (550)
T ss_pred chhhhh
Confidence 998865
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.5e-10 Score=120.49 Aligned_cols=85 Identities=26% Similarity=0.455 Sum_probs=72.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC----CceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR----EQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~----~~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .+|+.||||..+.. .....+...+|+++|++++|+|||++++.-.+.. .....+|||
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE 97 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME 97 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence 67899999999999996 78999999998653 3345678899999999999999999998755443 234789999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
||.+|||+..|
T Consensus 98 yC~gGsL~~~L 108 (732)
T KOG4250|consen 98 YCSGGSLRKVL 108 (732)
T ss_pred ecCCCcHHHHh
Confidence 99999999876
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.02 E-value=8.6e-11 Score=111.12 Aligned_cols=94 Identities=18% Similarity=0.278 Sum_probs=83.2
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCce
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQE 537 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~ 537 (555)
=+++|++.-|+++||+|+||.|--|+. .+|..||||.+.+..........+|++++..++ |+||+.|+.++++...
T Consensus 73 g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~-- 150 (463)
T KOG0607|consen 73 GKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTR-- 150 (463)
T ss_pred chHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccce--
Confidence 457888888899999999999999984 789999999998765556778899999999885 9999999999998776
Q ss_pred EEEEEeccCCCChhhhhC
Q 048796 538 RLLLADYIQGDSLALHLY 555 (555)
Q Consensus 538 ~~lv~e~~~~GsL~~~l~ 555 (555)
.|||||-|.||.|..+|+
T Consensus 151 FYLVfEKm~GGplLshI~ 168 (463)
T KOG0607|consen 151 FYLVFEKMRGGPLLSHIQ 168 (463)
T ss_pred EEEEEecccCchHHHHHH
Confidence 999999999999998874
|
|
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.3e-09 Score=107.93 Aligned_cols=85 Identities=24% Similarity=0.435 Sum_probs=72.5
Q ss_pred CCeeecCCceEEEEEEe-----CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-----DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||++.+ .++..||+|.+........+.|.+|+.++++++||||+++++++...+....++|+||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 88 (284)
T cd05081 9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEY 88 (284)
T ss_pred eeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEe
Confidence 67899999999999985 3578999999976665556789999999999999999999998865443338999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 89 ~~~~~L~~~l 98 (284)
T cd05081 89 LPYGSLRDYL 98 (284)
T ss_pred cCCCCHHHHH
Confidence 9999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.2e-09 Score=110.85 Aligned_cols=83 Identities=19% Similarity=0.356 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||++.. .++..+|+|.+..... ...+.+.+|+.++..++|+||++++++|...+. .++||||+++
T Consensus 10 ~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~ 87 (333)
T cd06650 10 ISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDG 87 (333)
T ss_pred eccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCE--EEEEEecCCC
Confidence 67899999999999997 5788999998865432 235679999999999999999999999998776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 88 ~~L~~~l 94 (333)
T cd06650 88 GSLDQVL 94 (333)
T ss_pred CcHHHHH
Confidence 9999876
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.01 E-value=6.8e-10 Score=109.37 Aligned_cols=81 Identities=14% Similarity=0.247 Sum_probs=68.0
Q ss_pred eeecCCceEEEEEEeC-C------------------------CCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceee
Q 048796 472 VLGRSSHGTLYKATLD-S------------------------GHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPL 526 (555)
Q Consensus 472 ~lG~G~~g~vy~~~~~-~------------------------g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l 526 (555)
.||+|+||.||+|.+. + ...||+|.+.........+|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 5899999999999851 1 13588998876544445778999999999999999999
Q ss_pred eEEEEcCCCceEEEEEeccCCCChhhhh
Q 048796 527 RAYYWGPREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 527 ~g~~~~~~~~~~~lv~e~~~~GsL~~~l 554 (555)
+++|..... .++||||+++|+|..++
T Consensus 82 ~~~~~~~~~--~~lv~ey~~~g~L~~~l 107 (274)
T cd05076 82 HGVCVRGSE--NIMVEEFVEHGPLDVCL 107 (274)
T ss_pred EEEEEeCCc--eEEEEecCCCCcHHHHH
Confidence 999988777 89999999999998775
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.00 E-value=8.1e-10 Score=114.40 Aligned_cols=83 Identities=19% Similarity=0.227 Sum_probs=71.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+|+. .+++.+|+|.+.... ....+.+.+|+.+++.++|+||+++++++.+.+. .++|||||
T Consensus 6 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~--~~lv~E~~ 83 (382)
T cd05625 6 IKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDN--LYFVMDYI 83 (382)
T ss_pred EEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCE--EEEEEeCC
Confidence 57899999999999997 678899999986432 1234578899999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~gg~L~~~l 92 (382)
T cd05625 84 PGGDMMSLL 92 (382)
T ss_pred CCCcHHHHH
Confidence 999998876
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.5e-09 Score=106.34 Aligned_cols=83 Identities=20% Similarity=0.209 Sum_probs=74.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
...||+|+||.||+|+. .++..||+|.+........+.+.+|+.++++++|+||+++++++...+. .++|+||+++|
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~~ 90 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGF--FKIFMEQVPGG 90 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCE--EEEEEecCCCC
Confidence 45899999999999996 5788899999876655567789999999999999999999999988776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 91 ~L~~~l 96 (268)
T cd06624 91 SLSALL 96 (268)
T ss_pred CHHHHH
Confidence 999876
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.3e-09 Score=110.03 Aligned_cols=82 Identities=21% Similarity=0.377 Sum_probs=69.9
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
++||+|+||.||+++. .+|..||+|.+.... ......+.+|+.++..++||||+++++++...+. .++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~--~~lv~E~~~ 78 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDR--LCFVMEYAN 78 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCE--EEEEEeCCC
Confidence 3699999999999997 578999999986532 2234567889999999999999999999987776 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 79 ~~~L~~~l 86 (323)
T cd05595 79 GGELFFHL 86 (323)
T ss_pred CCcHHHHH
Confidence 99998765
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.3e-09 Score=110.14 Aligned_cols=82 Identities=20% Similarity=0.365 Sum_probs=70.2
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
++||+|+||.||+++. .+|+.||||.+.... ......+.+|+.++++++||||+++++++...+. .++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~--~~lv~e~~~ 78 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDR--LCFVMEYAN 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCE--EEEEEeCCC
Confidence 3699999999999987 678999999986532 2234567889999999999999999999988776 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 79 ~~~L~~~l 86 (323)
T cd05571 79 GGELFFHL 86 (323)
T ss_pred CCcHHHHH
Confidence 99998765
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.9e-09 Score=104.48 Aligned_cols=82 Identities=26% Similarity=0.397 Sum_probs=71.5
Q ss_pred CeeecCCceEEEEEEeCCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
++||+|+||.||+|...++..+|+|.+..... .....|.+|+.++..++||||++++++|...+. .++||||+++|+
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~~ 78 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQP--IYIVMELVPGGD 78 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCc--cEEEEECCCCCc
Confidence 36999999999999987889999999875443 234578999999999999999999999987776 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 79 L~~~~ 83 (250)
T cd05085 79 FLSFL 83 (250)
T ss_pred HHHHH
Confidence 98875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.5e-09 Score=110.09 Aligned_cols=83 Identities=19% Similarity=0.322 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+++. .+|..+|+|.+..... ...+.+.+|+.++.+++||||+++++++...+. .++||||+++
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~ 87 (331)
T cd06649 10 ISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDG 87 (331)
T ss_pred EEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCE--EEEEeecCCC
Confidence 67899999999999997 5788999999875422 335679999999999999999999999987766 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 88 ~~L~~~l 94 (331)
T cd06649 88 GSLDQVL 94 (331)
T ss_pred CcHHHHH
Confidence 9999876
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.9e-09 Score=105.26 Aligned_cols=82 Identities=21% Similarity=0.343 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|...++..||+|.+..... ..+.+.+|+.+++.++|+||+++++++...+. .+++|||+++|+
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~~ 87 (261)
T cd05072 11 VKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEP--IYIITEYMAKGS 87 (261)
T ss_pred eeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC--cEEEEecCCCCc
Confidence 678999999999999987788899999865432 35789999999999999999999999887776 899999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 88 L~~~l 92 (261)
T cd05072 88 LLDFL 92 (261)
T ss_pred HHHHH
Confidence 98876
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.99 E-value=1e-09 Score=111.41 Aligned_cols=83 Identities=17% Similarity=0.308 Sum_probs=71.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+++.||||.+..... ...+.+.+|+.++..++||||+++++++...+. .++||||+
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~--~~lv~e~~ 83 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEY--LYLAMEYV 83 (333)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCE--EEEEEeCC
Confidence 56899999999999998 4689999999864321 234678899999999999999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~g~~L~~~l 92 (333)
T cd05600 84 PGGDFRTLL 92 (333)
T ss_pred CCCCHHHHH
Confidence 999999876
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.8e-11 Score=115.12 Aligned_cols=186 Identities=22% Similarity=0.281 Sum_probs=132.5
Q ss_pred CCCCEEEcCCCcCCCCC----cccccCCCCccEEEccCCcCCCC-------------CCccccCCCCccEEEeeCCcCCC
Q 048796 29 KSCVILDLSRNMISGDI----SDMQNWEANLEILDLSSNKLSGS-------------LPNLTSQFDRLSTFNIRNNSVTG 91 (555)
Q Consensus 29 ~~L~~L~L~~N~l~~~~----~~~~~~~~~L~~L~Ls~N~l~~~-------------~~~~~~~l~~L~~L~L~~N~l~~ 91 (555)
+.|++||||.|.|.... ..+++....|++|.|.+|.+... .......-+.|+++...+|++..
T Consensus 92 ~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen 171 (382)
T KOG1909|consen 92 PKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLEN 171 (382)
T ss_pred CceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecccccc
Confidence 36788888888885322 23445566788888888887621 11223455789999999999874
Q ss_pred C----CchhccCCCCccEEEcCCCcCCC----CCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEE
Q 048796 92 T----LPSLLEISPRLVTLDVSSNQLKG----PIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESL 163 (555)
Q Consensus 92 ~----~~~~l~~l~~L~~L~L~~N~l~~----~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L 163 (555)
. +...|...+.|+.+.+..|.|.. .+...|..+++|+.|+|.+|-|+......++.. ++.+++|+.|
T Consensus 172 ~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~Laka-----L~s~~~L~El 246 (382)
T KOG1909|consen 172 GGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKA-----LSSWPHLREL 246 (382)
T ss_pred ccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHH-----hcccchheee
Confidence 3 33456777899999999998862 234567889999999999998875433333332 5556889999
Q ss_pred EccCCcCCCcCCcccc-----CccccceeecccccccCC----CchhccCCCCCCEEeCCCCcCC
Q 048796 164 DLSGNALTGVLPSDIG-----NMGRLRLLNLANNHLSGK----MPSELSKLGALEYLDLSGNQFK 219 (555)
Q Consensus 164 ~Ls~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 219 (555)
++++|.+......+|. ..++|+.|.+.+|.|+.. +.......+.|..|+|++|.+.
T Consensus 247 ~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 247 NLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 9999998865443332 357899999999999732 2234456789999999999994
|
|
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.6e-09 Score=105.07 Aligned_cols=82 Identities=26% Similarity=0.393 Sum_probs=71.1
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
+.||+|+||.||+|+. .+++.+|+|.+.... ......|.+|+.+++.++||||++++++|..... .++|+||+++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP--IYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCC--eEEEEeeccCC
Confidence 3699999999999997 578999999886433 2335679999999999999999999999988777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 79 ~L~~~~ 84 (252)
T cd05084 79 DFLTFL 84 (252)
T ss_pred cHHHHH
Confidence 999876
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1e-09 Score=107.62 Aligned_cols=85 Identities=26% Similarity=0.452 Sum_probs=71.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||.+.. .+|...|||.+........+.+.+|+.+|.+++|||||+++|.....+....+++|||+++|
T Consensus 22 ~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~G 101 (313)
T KOG0198|consen 22 GKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGG 101 (313)
T ss_pred hccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCC
Confidence 78999999999999998 45999999998765333367789999999999999999999975433311389999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 102 sL~~~~ 107 (313)
T KOG0198|consen 102 SLSDLI 107 (313)
T ss_pred cHHHHH
Confidence 999875
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.2e-09 Score=112.57 Aligned_cols=91 Identities=24% Similarity=0.325 Sum_probs=74.5
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEe------CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcC-CCCcceeeeEEEE
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSM-RHPNIVPLRAYYW 531 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l-~H~niv~l~g~~~ 531 (555)
|..+++.. .+.||+|+||.||+|+. .++..||||+++.... ...+.+.+|+.+++.+ +|+|||+++++|.
T Consensus 35 ~~~~~~~~--~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 35 FPRDNLQF--GKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred ccHHHcee--hheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 44445544 78999999999999984 2345799999975432 2356788999999999 8999999999998
Q ss_pred cCCCceEEEEEeccCCCChhhhh
Q 048796 532 GPREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 532 ~~~~~~~~lv~e~~~~GsL~~~l 554 (555)
..+. .++||||+++|+|.+++
T Consensus 113 ~~~~--~~lv~ey~~~g~L~~~l 133 (374)
T cd05106 113 HGGP--VLVITEYCCYGDLLNFL 133 (374)
T ss_pred CCCC--eEEeHhhccCCcHHHHH
Confidence 8777 99999999999999876
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.7e-09 Score=106.19 Aligned_cols=81 Identities=20% Similarity=0.250 Sum_probs=68.5
Q ss_pred eeecCCceEEEEEEeC---CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 472 VLGRSSHGTLYKATLD---SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 472 ~lG~G~~g~vy~~~~~---~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.||+|+||.||+|.+. .+..+|+|.++.... .....|.+|+.++++++||||+++++++..... .++||||+++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~ 79 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTP--YLLVMEFCPL 79 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCC--cEEEEECCCC
Confidence 5899999999999863 345799998865432 334578999999999999999999999987766 8999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 80 g~L~~~l 86 (269)
T cd05087 80 GDLKGYL 86 (269)
T ss_pred CcHHHHH
Confidence 9998876
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.1e-09 Score=105.21 Aligned_cols=83 Identities=22% Similarity=0.303 Sum_probs=72.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
...||+|+||.||+|+. .+++.+|+|.+..........+.+|+.++.+++||||+++++++...+. .++|+||+++|
T Consensus 14 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~--~~iv~e~~~~~ 91 (267)
T cd06646 14 IQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREK--LWICMEYCGGG 91 (267)
T ss_pred hheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCE--EEEEEeCCCCC
Confidence 77899999999999997 6788999999865444445678899999999999999999999987766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 92 ~L~~~~ 97 (267)
T cd06646 92 SLQDIY 97 (267)
T ss_pred cHHHHH
Confidence 998875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.4e-09 Score=102.30 Aligned_cols=92 Identities=21% Similarity=0.327 Sum_probs=79.2
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh---cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR---HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE 535 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~ 535 (555)
++++|.++ ...||.|+||+|...+. .+|..+|+|.++..... ..+-..+|..+++.+.||.++++++.|.+.+.
T Consensus 41 ~~l~dfe~--~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ 118 (355)
T KOG0616|consen 41 YSLQDFER--LKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSN 118 (355)
T ss_pred cchhhhhh--eeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCe
Confidence 67777766 77999999999999997 67899999999764332 23456789999999999999999999998877
Q ss_pred ceEEEEEeccCCCChhhhhC
Q 048796 536 QERLLLADYIQGDSLALHLY 555 (555)
Q Consensus 536 ~~~~lv~e~~~~GsL~~~l~ 555 (555)
+|+||||++||.|..+|+
T Consensus 119 --lymvmeyv~GGElFS~Lr 136 (355)
T KOG0616|consen 119 --LYMVMEYVPGGELFSYLR 136 (355)
T ss_pred --EEEEEeccCCccHHHHHH
Confidence 999999999999999875
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.98 E-value=7.2e-10 Score=110.22 Aligned_cols=83 Identities=19% Similarity=0.272 Sum_probs=71.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|.. .+|+.+|+|.+.... ....+.+.+|+.++++++||||+++++++.+.+. .++||||+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~ 83 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRF--LYMLMEYV 83 (291)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCe--EEEEEeCC
Confidence 67899999999999997 578999999986432 1234668899999999999999999999887766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~~~~L~~~~ 92 (291)
T cd05612 84 PGGELFSYL 92 (291)
T ss_pred CCCCHHHHH
Confidence 999998875
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.5e-09 Score=109.20 Aligned_cols=80 Identities=24% Similarity=0.405 Sum_probs=68.9
Q ss_pred eecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 473 LGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 473 lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
||+|+||.||+++. .+++.||+|.+.... ......+.+|+.++.+++||||+++++++...+. .++||||+++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~g 78 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEK--LYLVLAFINGG 78 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCe--EEEEEcCCCCC
Confidence 69999999999997 568899999986432 2234678899999999999999999999987766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 79 ~L~~~l 84 (312)
T cd05585 79 ELFHHL 84 (312)
T ss_pred cHHHHH
Confidence 998876
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.2e-09 Score=106.15 Aligned_cols=83 Identities=28% Similarity=0.409 Sum_probs=71.1
Q ss_pred CCeeecCCceEEEEEEe-----CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-----DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|.+ ..+..+|+|.+.... ....+.|.+|+.++++++||||+++++++..... .+++||
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e 87 (283)
T cd05090 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP--VCMLFE 87 (283)
T ss_pred eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc--eEEEEE
Confidence 67899999999999984 346789999986432 3345679999999999999999999999988777 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 88 ~~~~~~L~~~l 98 (283)
T cd05090 88 YLNQGDLHEFL 98 (283)
T ss_pred cCCCCcHHHHH
Confidence 99999998876
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.2e-09 Score=108.64 Aligned_cols=82 Identities=21% Similarity=0.385 Sum_probs=70.3
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
++||+|+||.||+++. .+|+.||||.+.... ......+.+|+.+++.++||||+++++++...+. .++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~Ey~~ 78 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDR--LCFVMEYVN 78 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCE--EEEEEeCCC
Confidence 3699999999999987 578999999996432 2234678899999999999999999999987776 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 79 ~g~L~~~l 86 (328)
T cd05593 79 GGELFFHL 86 (328)
T ss_pred CCCHHHHH
Confidence 99998765
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.1e-09 Score=109.35 Aligned_cols=83 Identities=19% Similarity=0.239 Sum_probs=70.2
Q ss_pred CCeeecCCceEEEEEEeC--CCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD--SGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~--~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|.+. ++..||+|.+.... ....+.+.+|+.++..++||||+++++++...+. .++||||
T Consensus 35 ~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~--~~lv~Ey 112 (340)
T PTZ00426 35 IRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESY--LYLVLEF 112 (340)
T ss_pred EEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCE--EEEEEeC
Confidence 678999999999999863 34689999985422 2234678899999999999999999999988776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 113 ~~~g~L~~~i 122 (340)
T PTZ00426 113 VIGGEFFTFL 122 (340)
T ss_pred CCCCcHHHHH
Confidence 9999998876
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.2e-09 Score=106.49 Aligned_cols=83 Identities=19% Similarity=0.331 Sum_probs=75.2
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|...++..+|+|.+..........+..|+.+++.++|+||+++++++...+. .++||||+++|+
T Consensus 11 ~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~lv~e~~~~~~ 88 (261)
T cd05148 11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEP--VYIITELMEKGS 88 (261)
T ss_pred hhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCC--eEEEEeecccCC
Confidence 788999999999999987789999999976655556789999999999999999999999988777 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 89 L~~~~ 93 (261)
T cd05148 89 LLAFL 93 (261)
T ss_pred HHHHH
Confidence 99876
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.96 E-value=2e-09 Score=109.74 Aligned_cols=83 Identities=22% Similarity=0.370 Sum_probs=71.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC----Ch-hcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG----LV-RHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~----~~-~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
++.||+|+||+||.|.. .+|..||||.+... .. ...+...+|+.++++++ ||||++++.++..... .++||
T Consensus 22 ~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~--~~ivm 99 (370)
T KOG0583|consen 22 GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK--IYIVM 99 (370)
T ss_pred eeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe--EEEEE
Confidence 78999999999999986 67899999977553 11 22455668999999999 9999999999998887 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+.+|+|++++
T Consensus 100 Ey~~gGdL~~~i 111 (370)
T KOG0583|consen 100 EYCSGGDLFDYI 111 (370)
T ss_pred EecCCccHHHHH
Confidence 999999999886
|
|
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.4e-09 Score=104.25 Aligned_cols=82 Identities=20% Similarity=0.292 Sum_probs=71.6
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|.+.++..+|||.+.... ...++|.+|+.++.+++||||++++++|...+. .+++|||+++|+
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~~ 85 (256)
T cd05113 9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRP--IYIVTEYMSNGC 85 (256)
T ss_pred eeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCC--cEEEEEcCCCCc
Confidence 67899999999999998666779999987543 235679999999999999999999999987776 899999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 86 l~~~i 90 (256)
T cd05113 86 LLNYL 90 (256)
T ss_pred HHHHH
Confidence 98876
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.3e-09 Score=106.18 Aligned_cols=83 Identities=19% Similarity=0.294 Sum_probs=70.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||++.. .+|+.||||.+..... .....+.+|+.++..++|++|+++.+++...+. .++|+||+
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~--~~lv~e~~ 82 (285)
T cd05631 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDA--LCLVLTIM 82 (285)
T ss_pred EEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCe--EEEEEEec
Confidence 56899999999999997 6899999999864322 224568899999999999999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 83 ~~g~L~~~~ 91 (285)
T cd05631 83 NGGDLKFHI 91 (285)
T ss_pred CCCcHHHHH
Confidence 999997664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.7e-09 Score=111.25 Aligned_cols=83 Identities=18% Similarity=0.277 Sum_probs=71.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+++.||||.+..... ...+.+.+|+.++.+++|+||+++++++.+... .++||||+
T Consensus 6 ~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~--~~lv~E~~ 83 (363)
T cd05628 6 LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLN--LYLIMEFL 83 (363)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCe--EEEEEcCC
Confidence 67899999999999987 5789999999965321 224568889999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~gg~L~~~l 92 (363)
T cd05628 84 PGGDMMTLL 92 (363)
T ss_pred CCCcHHHHH
Confidence 999998876
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.2e-10 Score=121.43 Aligned_cols=221 Identities=23% Similarity=0.229 Sum_probs=161.1
Q ss_pred CcCCCCCCEEECCCCcCCCCCC--CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccE
Q 048796 4 GINSTTLSVLNLSSNSLSGTLP--TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLST 81 (555)
Q Consensus 4 ~~n~~~L~~L~Ls~N~l~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 81 (555)
...+++|+.|++.+|.|..... +.+.+|++|+|++|.|+.+.. ...+..|+.|++++|.|+. +. .+..+..|+.
T Consensus 91 l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~~-~~-~~~~l~~L~~ 166 (414)
T KOG0531|consen 91 LSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLISD-IS-GLESLKSLKL 166 (414)
T ss_pred cccccceeeeeccccchhhcccchhhhhcchheeccccccccccc--hhhccchhhheeccCcchh-cc-CCccchhhhc
Confidence 3456899999999999997655 679999999999999987642 3445569999999999983 22 3455899999
Q ss_pred EEeeCCcCCCCCc-hhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCC--
Q 048796 82 FNIRNNSVTGTLP-SLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYP-- 158 (555)
Q Consensus 82 L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~-- 158 (555)
+++++|.+....+ . ...+.+++.+++.+|.+.. ...+..+..+..+++..|.+...-+. ..+.
T Consensus 167 l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~~~~~l-----------~~~~~~ 232 (414)
T KOG0531|consen 167 LDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKISKLEGL-----------NELVML 232 (414)
T ss_pred ccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccceeccCc-----------ccchhH
Confidence 9999999986544 2 5778899999999999863 33444555666668888888733221 1113
Q ss_pred CcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCC---Chh-h--hcCCCE
Q 048796 159 PMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEI---PDK-L--SLKLNE 232 (555)
Q Consensus 159 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~---p~~-~--~~~L~~ 232 (555)
.|+.+++++|.+.. .+..+..+..+..|++.+|++... ..+...+.+..+.+..|.+.... ... . .+.+..
T Consensus 233 ~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (414)
T KOG0531|consen 233 HLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVT 309 (414)
T ss_pred HHHHHhcccCcccc-ccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccc
Confidence 27899999999984 335677788999999999999744 34556677888888888877321 111 1 145666
Q ss_pred EEeccCCCCCCcC
Q 048796 233 FNVSYNDLSGPIP 245 (555)
Q Consensus 233 L~ls~N~l~~~~p 245 (555)
+.+.+|++....+
T Consensus 310 ~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 310 LTLELNPIRKISS 322 (414)
T ss_pred cccccCccccccc
Confidence 7777776665443
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.95 E-value=2e-09 Score=106.71 Aligned_cols=83 Identities=19% Similarity=0.292 Sum_probs=70.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||++.. .+++.||||.+..... .....+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~ 82 (285)
T cd05605 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDA--LCLVLTLM 82 (285)
T ss_pred EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCe--EEEEEecc
Confidence 56899999999999997 5789999999864322 223567889999999999999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 83 ~~~~L~~~~ 91 (285)
T cd05605 83 NGGDLKFHI 91 (285)
T ss_pred CCCcHHHHH
Confidence 999998765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.4e-09 Score=107.37 Aligned_cols=83 Identities=20% Similarity=0.318 Sum_probs=72.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||++.. .+|..+|+|.++.... ...+++.+|+.++.+++||||+++++++...+. .++|+||+++
T Consensus 6 ~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~ey~~~ 83 (308)
T cd06615 6 LGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDG 83 (308)
T ss_pred EeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCE--EEEEeeccCC
Confidence 67899999999999997 5788899999865432 234678899999999999999999999988776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 84 ~~L~~~l 90 (308)
T cd06615 84 GSLDQVL 90 (308)
T ss_pred CcHHHHH
Confidence 9999876
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=98.95 E-value=2e-09 Score=111.15 Aligned_cols=83 Identities=17% Similarity=0.232 Sum_probs=71.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+++.||||.+.... ....+.+.+|+.++.+++|+||+++++.+...+. .++||||+
T Consensus 6 ~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~--~~lv~E~~ 83 (376)
T cd05598 6 IKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDN--LYFVMDYI 83 (376)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCE--EEEEEeCC
Confidence 57899999999999997 578999999986432 1234668899999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~~g~L~~~i 92 (376)
T cd05598 84 PGGDMMSLL 92 (376)
T ss_pred CCCcHHHHH
Confidence 999999876
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.4e-09 Score=105.66 Aligned_cols=83 Identities=24% Similarity=0.451 Sum_probs=73.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||++.. .++..+|+|.+........+.|.+|+.++++++|+||+++++++..... .++||||+++|
T Consensus 10 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~ 87 (280)
T cd06611 10 IGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENK--LWILIEFCDGG 87 (280)
T ss_pred HHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCe--EEEEeeccCCC
Confidence 66799999999999997 5788999999876655556789999999999999999999999987776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 88 ~L~~~~ 93 (280)
T cd06611 88 ALDSIM 93 (280)
T ss_pred cHHHHH
Confidence 998775
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.1e-09 Score=109.51 Aligned_cols=83 Identities=18% Similarity=0.224 Sum_probs=71.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .++..||+|.+... .....+.+.+|+.+++.++||||+++++++..... .++||||+
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~--~~lv~Ey~ 125 (370)
T cd05596 48 IKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKY--LYMVMEYM 125 (370)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE--EEEEEcCC
Confidence 67899999999999997 57899999998642 12234567899999999999999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 126 ~gg~L~~~l 134 (370)
T cd05596 126 PGGDLVNLM 134 (370)
T ss_pred CCCcHHHHH
Confidence 999998875
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.8e-09 Score=105.39 Aligned_cols=80 Identities=18% Similarity=0.285 Sum_probs=67.7
Q ss_pred eecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 473 LGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 473 lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
||+|+||+||+++. .+|+.+|||.+..... ...+.+..|+.+++.++|+||+++.+++..... .++|||||++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~--~~lv~e~~~~g 78 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTD--LCLVMTIMNGG 78 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCe--EEEEEeCCCCC
Confidence 69999999999987 5789999999864322 223567889999999999999999998887766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 79 ~L~~~~ 84 (280)
T cd05608 79 DLRYHI 84 (280)
T ss_pred CHHHHH
Confidence 997664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.94 E-value=4e-09 Score=102.63 Aligned_cols=82 Identities=22% Similarity=0.364 Sum_probs=71.8
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||++.+.++..+|+|.+..... ...+|.+|+.+++.++|+||+++++++...+. .++|+||+++|+
T Consensus 9 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~lv~e~~~~~~ 85 (256)
T cd05059 9 LKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRP--IFIVTEYMANGC 85 (256)
T ss_pred hhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc--eEEEEecCCCCC
Confidence 778999999999999987777899999864332 34678899999999999999999999987777 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 86 L~~~l 90 (256)
T cd05059 86 LLNYL 90 (256)
T ss_pred HHHHH
Confidence 99876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.94 E-value=4.7e-09 Score=102.73 Aligned_cols=83 Identities=24% Similarity=0.483 Sum_probs=71.2
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|++. +...||||.++.... ...++|.+|+.++++++||||+++++++...+. .+++|||
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~iv~e~ 86 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRP--VMIITEY 86 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCc--eEEEEEc
Confidence 789999999999999973 245799999865433 335679999999999999999999999987777 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 87 ~~~~~L~~~~ 96 (266)
T cd05033 87 MENGSLDKFL 96 (266)
T ss_pred CCCCCHHHHH
Confidence 9999999876
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.1e-09 Score=109.53 Aligned_cols=85 Identities=21% Similarity=0.321 Sum_probs=69.7
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|.. .+++.||||.++.... .....+.+|+.++.++ +||||++++++|...+. ..+++
T Consensus 12 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~-~~~lv 90 (343)
T cd05103 12 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVI 90 (343)
T ss_pred cccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC-ceEEE
Confidence 78999999999999973 3578899999975432 2346788999999999 68999999998865432 37899
Q ss_pred EeccCCCChhhhhC
Q 048796 542 ADYIQGDSLALHLY 555 (555)
Q Consensus 542 ~e~~~~GsL~~~l~ 555 (555)
+||+++|+|.++++
T Consensus 91 ~ey~~~g~L~~~i~ 104 (343)
T cd05103 91 VEFCKFGNLSNYLR 104 (343)
T ss_pred EeccCCCcHHHHHH
Confidence 99999999998863
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.3e-09 Score=105.66 Aligned_cols=83 Identities=19% Similarity=0.347 Sum_probs=72.0
Q ss_pred CCeeecCCceEEEEEEeC------CCCEEEEEEeccCChh-cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~~-~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|+.. ++..||||.+...... ..+.|.+|+.++.+++|+||+++++++..... .++||
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~lv~ 87 (280)
T cd05049 10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDP--PIMVF 87 (280)
T ss_pred HhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC--eEEEE
Confidence 678999999999999863 2478999998765443 45789999999999999999999999988777 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 88 e~~~~~~L~~~i 99 (280)
T cd05049 88 EYMEHGDLNKFL 99 (280)
T ss_pred ecCCCCCHHHHH
Confidence 999999999876
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.4e-10 Score=111.70 Aligned_cols=83 Identities=22% Similarity=0.386 Sum_probs=74.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh-cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.++||+|+||.||||.. ..++.||+|.+...... ..++.++|+.+++.++|+||.+++|.|..+.. +|++||||.+
T Consensus 18 ~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~--LwiiMey~~g 95 (467)
T KOG0201|consen 18 LELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTK--LWIIMEYCGG 95 (467)
T ss_pred chhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeeccc--HHHHHHHhcC
Confidence 57899999999999997 68899999999765443 46789999999999999999999999988777 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|++.+.|
T Consensus 96 Gsv~~lL 102 (467)
T KOG0201|consen 96 GSVLDLL 102 (467)
T ss_pred cchhhhh
Confidence 9998876
|
|
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.1e-09 Score=106.81 Aligned_cols=82 Identities=20% Similarity=0.381 Sum_probs=69.3
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
++||+|+||.||+++. .+++.||||.++.... ...+.+..|+.++..+ +||||+++++++...+. .++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~--~~lv~e~~ 78 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESR--LFFVIEFV 78 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCE--EEEEEeCC
Confidence 3699999999999997 5789999999965322 2345688899999888 79999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 79 ~~g~L~~~~ 87 (329)
T cd05588 79 SGGDLMFHM 87 (329)
T ss_pred CCCCHHHHH
Confidence 999998765
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.5e-09 Score=102.16 Aligned_cols=83 Identities=24% Similarity=0.443 Sum_probs=71.7
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|...+|+.+|||.+..... ...+.+.+|+.++++++|+||++++++|...+. .++++|
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~lv~e 82 (265)
T cd06631 5 GEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNT--ISIFME 82 (265)
T ss_pred cceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCe--EEEEEe
Confidence 678999999999999887899999998854321 123568899999999999999999999988766 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 83 ~~~~~~L~~~l 93 (265)
T cd06631 83 FVPGGSISSIL 93 (265)
T ss_pred cCCCCcHHHHH
Confidence 99999999876
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.2e-09 Score=105.77 Aligned_cols=82 Identities=18% Similarity=0.291 Sum_probs=69.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--------------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--------------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR 534 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--------------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~ 534 (555)
...||+|.||.|-+|+. .+++.||||.+.+... ...+...+||.+|++++|||||+|+.+..+..
T Consensus 102 ~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~ 181 (576)
T KOG0585|consen 102 IKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPE 181 (576)
T ss_pred hhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcc
Confidence 67899999999999996 6899999999954211 01357899999999999999999999987776
Q ss_pred CceEEEEEeccCCCChh
Q 048796 535 EQERLLLADYIQGDSLA 551 (555)
Q Consensus 535 ~~~~~lv~e~~~~GsL~ 551 (555)
.+.+|||+|||..|.+.
T Consensus 182 s~~~YlVley~s~G~v~ 198 (576)
T KOG0585|consen 182 SDKLYLVLEYCSKGEVK 198 (576)
T ss_pred cCceEEEEEeccCCccc
Confidence 66699999999999764
|
|
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.2e-09 Score=107.68 Aligned_cols=83 Identities=20% Similarity=0.261 Sum_probs=71.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+++.||||.+.... ....+.|.+|+.++..++|+||+++++++.+.+. .++||||+
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~--~~lv~e~~ 83 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENN--LYLVMDYY 83 (331)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCe--EEEEEecC
Confidence 57899999999999997 578999999986421 1234568899999999999999999999988777 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~g~~L~~~l 92 (331)
T cd05597 84 VGGDLLTLL 92 (331)
T ss_pred CCCcHHHHH
Confidence 999998876
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.3e-09 Score=106.44 Aligned_cols=82 Identities=20% Similarity=0.358 Sum_probs=69.8
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
++||+|+||.||+++. .+|..||+|.+.... ......+..|+.++..++||||+++++++...+. .++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~--~~lv~E~~~ 78 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDR--LCFVMEYAN 78 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCE--EEEEEeCCC
Confidence 3699999999999986 578999999986432 2234567889999999999999999999987776 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 79 ~~~L~~~l 86 (325)
T cd05594 79 GGELFFHL 86 (325)
T ss_pred CCcHHHHH
Confidence 99998765
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.9e-09 Score=104.59 Aligned_cols=83 Identities=24% Similarity=0.372 Sum_probs=73.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+++. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++...+. .++||||+++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~--~~lv~e~~~~~ 101 (297)
T cd06656 24 FEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE--LWVVMEYLAGG 101 (297)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCE--EEEeecccCCC
Confidence 77899999999999996 6799999999976554456778999999999999999999999987776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 102 ~L~~~~ 107 (297)
T cd06656 102 SLTDVV 107 (297)
T ss_pred CHHHHH
Confidence 998865
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.3e-09 Score=102.70 Aligned_cols=82 Identities=22% Similarity=0.330 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|++|.||+|...+++.||+|.++... ...++|.+|+.++++++|+||+++++++...+. .+++|||+++|+
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~~ 87 (261)
T cd05068 11 LRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEP--IYIVTELMKYGS 87 (261)
T ss_pred EEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCC--eeeeeecccCCc
Confidence 67999999999999998777889999987543 245779999999999999999999999987777 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 88 L~~~~ 92 (261)
T cd05068 88 LLEYL 92 (261)
T ss_pred HHHHH
Confidence 99876
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.9e-09 Score=106.42 Aligned_cols=82 Identities=26% Similarity=0.447 Sum_probs=69.2
Q ss_pred CeeecCCceEEEEEEe----CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 471 EVLGRSSHGTLYKATL----DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
+.||+|+||.||+++. .+|+.+|+|.+..... .....+..|+.++++++||||+++++++...+. .|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGK--LYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCE--EEEEEcC
Confidence 4799999999999874 3688999999865322 234567889999999999999999999987776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 80 ~~~~~L~~~l 89 (318)
T cd05582 80 LRGGDLFTRL 89 (318)
T ss_pred CCCCcHHHHH
Confidence 9999998775
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.4e-09 Score=106.28 Aligned_cols=82 Identities=24% Similarity=0.462 Sum_probs=69.2
Q ss_pred CeeecCCceEEEEEEe----CCCCEEEEEEeccCC----hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 471 EVLGRSSHGTLYKATL----DSGHMLTVKWLRVGL----VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~----~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
+.||+|+||.||+++. .+++.||||.++... ......+.+|+.+++.++||||+++++++...+. .|+||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~--~~lv~ 79 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGK--LYLIL 79 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCe--EEEEE
Confidence 5799999999999985 357899999986432 1234567889999999999999999999987776 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 80 e~~~~~~L~~~~ 91 (323)
T cd05584 80 EYLSGGELFMHL 91 (323)
T ss_pred eCCCCchHHHHH
Confidence 999999998775
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.1e-09 Score=114.89 Aligned_cols=85 Identities=24% Similarity=0.273 Sum_probs=72.2
Q ss_pred CCeeecCCceEEEEEEeCC-CCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CCcceeeeE-EEE---cCC-CceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLDS-GHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNIVPLRA-YYW---GPR-EQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~niv~l~g-~~~---~~~-~~~~~lv~ 542 (555)
.++|.+|||+.||.++... |..||+|++-...+...+.+.+||.+|+.|. |+|||.+++ ... ... ..|.+|+|
T Consensus 42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLm 121 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLM 121 (738)
T ss_pred EEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeeh
Confidence 7899999999999999844 4999999997767777899999999999997 999999999 332 222 24689999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
|||.+|.|-+++
T Consensus 122 EyC~gg~Lvd~m 133 (738)
T KOG1989|consen 122 EYCKGGSLVDFM 133 (738)
T ss_pred hhccCCcHHHHH
Confidence 999999998875
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.3e-09 Score=104.14 Aligned_cols=83 Identities=18% Similarity=0.322 Sum_probs=72.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+++. .+|+.+|+|.+.... ....+.+.+|+.+++.++||||+++++++...+. .++||||+++
T Consensus 10 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~ 87 (284)
T cd06620 10 ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENN--ICMCMEFMDC 87 (284)
T ss_pred HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCE--EEEEEecCCC
Confidence 56899999999999997 578999999886533 2346789999999999999999999999988766 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 88 ~~L~~~~ 94 (284)
T cd06620 88 GSLDRIY 94 (284)
T ss_pred CCHHHHH
Confidence 9998765
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.7e-09 Score=101.46 Aligned_cols=81 Identities=22% Similarity=0.383 Sum_probs=72.0
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|.. .|+.+|||.+..... ..+.+.+|+.++++++|+||+++++++..... .++||||+++|+
T Consensus 11 ~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~~v~e~~~~~~ 86 (256)
T cd05039 11 GATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNP--LYIVTEYMAKGS 86 (256)
T ss_pred eeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCC--eEEEEEecCCCc
Confidence 77899999999999997 588999999976543 46789999999999999999999999987666 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 87 L~~~~ 91 (256)
T cd05039 87 LVDYL 91 (256)
T ss_pred HHHHH
Confidence 98875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.4e-09 Score=107.43 Aligned_cols=83 Identities=19% Similarity=0.213 Sum_probs=70.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+++.||+|.+.... ......+.+|+.++..++|++|+++++++...+. .|+||||+
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~--~~lv~Ey~ 83 (331)
T cd05624 6 IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENY--LYLVMDYY 83 (331)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE--EEEEEeCC
Confidence 56899999999999997 578899999986422 1224558889999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~gg~L~~~l 92 (331)
T cd05624 84 VGGDLLTLL 92 (331)
T ss_pred CCCcHHHHH
Confidence 999999876
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=98.91 E-value=5e-09 Score=102.74 Aligned_cols=81 Identities=21% Similarity=0.235 Sum_probs=67.6
Q ss_pred eeecCCceEEEEEEeC---CCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 472 VLGRSSHGTLYKATLD---SGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 472 ~lG~G~~g~vy~~~~~---~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.||+|+||.||+|+.. ....+|+|.+.... ......|.+|+..++.++|+||++++++|..... .++||||+++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~--~~lv~e~~~~ 79 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIP--YLLVLEFCPL 79 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCc--eEEEEEeCCC
Confidence 5899999999999753 34568888875432 2335678999999999999999999999987777 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 80 g~L~~~l 86 (269)
T cd05042 80 GDLKNYL 86 (269)
T ss_pred CcHHHHH
Confidence 9999876
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.4e-09 Score=104.69 Aligned_cols=83 Identities=25% Similarity=0.391 Sum_probs=72.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||++.. .++..+|+|.+........+.+.+|+.++++++||||++++++|...+. .++|+||+++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~--~~lv~e~~~~~ 101 (293)
T cd06647 24 FEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDE--LWVVMEYLAGG 101 (293)
T ss_pred eeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCc--EEEEEecCCCC
Confidence 67899999999999986 5788999999865444446778999999999999999999999987776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 102 ~L~~~~ 107 (293)
T cd06647 102 SLTDVV 107 (293)
T ss_pred cHHHHH
Confidence 998875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.4e-09 Score=101.55 Aligned_cols=83 Identities=25% Similarity=0.398 Sum_probs=71.8
Q ss_pred CCeeecCCceEEEEEEeC-CCCEEEEEEeccCC-----hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATLD-SGHMLTVKWLRVGL-----VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~-----~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.++||+|+||.||+|+.. ++..|++|.+.... ....+.+.+|+.++++++|+||+++++++...+. .++++|
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~--~~lv~e 82 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDN--LYIFLE 82 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCe--EEEEEE
Confidence 678999999999999984 78999999885432 2235679999999999999999999999987776 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++++|.+++
T Consensus 83 ~~~~~~L~~~~ 93 (258)
T cd06632 83 LVPGGSLAKLL 93 (258)
T ss_pred ecCCCcHHHHH
Confidence 99999998876
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.1e-09 Score=110.88 Aligned_cols=84 Identities=21% Similarity=0.350 Sum_probs=70.3
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEE
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 539 (555)
+.+++|.. -+.||+|+-|.||.|++ .++.||||+++.-. ..+|+-+++++||||+.+.|+|..... .+
T Consensus 121 iPFe~IsE--LeWlGSGaQGAVF~Grl-~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPc--yC 188 (904)
T KOG4721|consen 121 IPFEEISE--LEWLGSGAQGAVFLGRL-HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPC--YC 188 (904)
T ss_pred CCHHHhhh--hhhhccCcccceeeeec-cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCce--eE
Confidence 44444433 45699999999999999 57899999886533 257889999999999999999998887 89
Q ss_pred EEEeccCCCChhhhhC
Q 048796 540 LLADYIQGDSLALHLY 555 (555)
Q Consensus 540 lv~e~~~~GsL~~~l~ 555 (555)
||||||..|-|+..|.
T Consensus 189 IiMEfCa~GqL~~VLk 204 (904)
T KOG4721|consen 189 IIMEFCAQGQLYEVLK 204 (904)
T ss_pred EeeeccccccHHHHHh
Confidence 9999999999998763
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.2e-09 Score=116.84 Aligned_cols=83 Identities=27% Similarity=0.360 Sum_probs=72.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+|+. .+|+.||||+++... ....+.|.+|+.++++++||||+++++++...+. .+++|||+
T Consensus 7 i~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~--lyLVMEY~ 84 (932)
T PRK13184 7 IRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDP--VYYTMPYI 84 (932)
T ss_pred EEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCE--EEEEEEcC
Confidence 67899999999999997 568999999996532 2235679999999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 85 eGGSL~~lL 93 (932)
T PRK13184 85 EGYTLKSLL 93 (932)
T ss_pred CCCCHHHHH
Confidence 999998875
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=98.90 E-value=5.9e-09 Score=103.02 Aligned_cols=90 Identities=24% Similarity=0.387 Sum_probs=73.3
Q ss_pred CHHHHhcccCCeeecCCceEEEEEEeC-CC-----CEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcC
Q 048796 461 TAEELSRAPAEVLGRSSHGTLYKATLD-SG-----HMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP 533 (555)
Q Consensus 461 ~~~~l~~~~~~~lG~G~~g~vy~~~~~-~g-----~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~ 533 (555)
+.+|+.. .+.||+|+||.||+|... .+ ..+|+|.+..... ...+.|.+|+.++++++||||+++++++...
T Consensus 3 ~~~~~~~--~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 80 (283)
T cd05048 3 PLSAVRF--LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE 80 (283)
T ss_pred ChHHcch--hhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC
Confidence 3444444 778999999999999862 22 5799999865432 3356799999999999999999999999877
Q ss_pred CCceEEEEEeccCCCChhhhh
Q 048796 534 REQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 534 ~~~~~~lv~e~~~~GsL~~~l 554 (555)
+. .+++|||+++|+|.+++
T Consensus 81 ~~--~~~~~e~~~~~~L~~~l 99 (283)
T cd05048 81 QP--TCMLFEYLAHGDLHEFL 99 (283)
T ss_pred Cc--eEEEEecCCCCcHHHHH
Confidence 66 89999999999998876
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=98.90 E-value=5.8e-09 Score=102.88 Aligned_cols=80 Identities=21% Similarity=0.313 Sum_probs=67.2
Q ss_pred eecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 473 LGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 473 lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
||+|+||.||+++. .+|+.+|+|.+..... ...+.+..|+.++.+++||||+++.+++..... .++||||+++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~--~~lv~e~~~g~ 78 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTH--LCLVMSLMNGG 78 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCe--EEEEEecCCCC
Confidence 69999999999997 5799999999864221 123456679999999999999999999987766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 79 ~L~~~~ 84 (277)
T cd05607 79 DLKYHI 84 (277)
T ss_pred CHHHHH
Confidence 998765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.6e-09 Score=111.98 Aligned_cols=83 Identities=18% Similarity=0.247 Sum_probs=71.2
Q ss_pred CCeeecCCceEEEEEEe-CC-CCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DS-GHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~-g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||++.. .+ +..||+|.+..........+.+|+.+++.++|||||++++++...+. .++||||+++
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~--~~lv~E~~~g 149 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDK--LLLIMEYGSG 149 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCE--EEEEEECCCC
Confidence 67899999999999986 34 67889998765544455678889999999999999999999988776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.++|
T Consensus 150 g~L~~~l 156 (478)
T PTZ00267 150 GDLNKQI 156 (478)
T ss_pred CCHHHHH
Confidence 9998765
|
|
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=98.90 E-value=6.7e-09 Score=102.38 Aligned_cols=83 Identities=16% Similarity=0.314 Sum_probs=71.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|.. .++..+|+|.+.... ....+.|.+|+.++.+++||||+++++++...+. .++||||+++
T Consensus 9 ~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~ 86 (277)
T cd06641 9 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK--LWIIMEYLGG 86 (277)
T ss_pred heeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCe--EEEEEEeCCC
Confidence 56899999999999986 578899999886433 2334678999999999999999999999988776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 87 ~~l~~~i 93 (277)
T cd06641 87 GSALDLL 93 (277)
T ss_pred CcHHHHH
Confidence 9998875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.3e-09 Score=108.38 Aligned_cols=83 Identities=18% Similarity=0.239 Sum_probs=71.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+++.+|+|.+... .....+.+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~--~~lv~Ey~ 125 (370)
T cd05621 48 VKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY--LYMVMEYM 125 (370)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE--EEEEEcCC
Confidence 67899999999999997 56889999998542 12234568899999999999999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 126 ~gg~L~~~l 134 (370)
T cd05621 126 PGGDLVNLM 134 (370)
T ss_pred CCCcHHHHH
Confidence 999998875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=98.90 E-value=5.9e-09 Score=102.25 Aligned_cols=83 Identities=24% Similarity=0.542 Sum_probs=70.8
Q ss_pred CCeeecCCceEEEEEEeC-CC---CEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD-SG---HMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g---~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+.. ++ ..||||.+... .....++|..|+.+++.++||||+++++++..... .++|+||
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~--~~lv~e~ 86 (269)
T cd05065 9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRP--VMIITEF 86 (269)
T ss_pred EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCc--eEEEEec
Confidence 678999999999999973 33 36999998654 23346789999999999999999999999987776 8999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 87 ~~~~~L~~~l 96 (269)
T cd05065 87 MENGALDSFL 96 (269)
T ss_pred CCCCcHHHHH
Confidence 9999998875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=98.90 E-value=6.1e-09 Score=105.51 Aligned_cols=82 Identities=20% Similarity=0.359 Sum_probs=68.3
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
++||+|+||.||+++. .+++.+|+|.+.... ....+.+..|+.++.++ +||||+++++++...+. .++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~--~~lv~E~~ 78 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR--LFFVIEYV 78 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCE--EEEEEeCC
Confidence 4799999999999997 578899999986532 22345678888888776 89999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 79 ~~~~L~~~~ 87 (329)
T cd05618 79 NGGDLMFHM 87 (329)
T ss_pred CCCCHHHHH
Confidence 999998764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=98.90 E-value=5.7e-09 Score=102.01 Aligned_cols=82 Identities=22% Similarity=0.314 Sum_probs=72.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|.. ..++.+|+|.+.... ...+++.+|+.++.+++|+||++++++|...+. .+++|||+++|
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~ 87 (263)
T cd05052 11 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYG 87 (263)
T ss_pred eeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCC--cEEEEEeCCCC
Confidence 67899999999999997 568899999986543 245679999999999999999999999988777 89999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 88 ~L~~~~ 93 (263)
T cd05052 88 NLLDYL 93 (263)
T ss_pred cHHHHH
Confidence 998875
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.90 E-value=6.8e-09 Score=101.23 Aligned_cols=82 Identities=23% Similarity=0.366 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||++...+++.+|||.+..... ..+++.+|+.++++++|+||+++++++..... .++||||+++|+
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~~v~e~~~~~~ 87 (261)
T cd05034 11 ERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEP--IYIVTEYMSKGS 87 (261)
T ss_pred eeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCc--eEEEEeccCCCC
Confidence 779999999999999987778899999875432 45789999999999999999999999887666 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 88 L~~~i 92 (261)
T cd05034 88 LLDFL 92 (261)
T ss_pred HHHHH
Confidence 98876
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=98.89 E-value=5.8e-09 Score=104.00 Aligned_cols=83 Identities=23% Similarity=0.370 Sum_probs=73.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+++.+|+|.+........+.+.+|+.+++.++|+||+++++++..... .++||||+++|
T Consensus 25 ~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~--~~lv~e~~~~~ 102 (296)
T cd06654 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE--LWVVMEYLAGG 102 (296)
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCE--EEEeecccCCC
Confidence 67899999999999986 5789999999876555456778999999999999999999999987666 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 103 ~L~~~~ 108 (296)
T cd06654 103 SLTDVV 108 (296)
T ss_pred CHHHHH
Confidence 998875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.3e-09 Score=101.49 Aligned_cols=83 Identities=23% Similarity=0.500 Sum_probs=70.3
Q ss_pred CCeeecCCceEEEEEEeC-C---CCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD-S---GHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~---g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+.. + +..+|+|.++.... ...+.|.+|+.++.+++||||+++++++...+. .++||||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~ 86 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKP--VMIVTEY 86 (267)
T ss_pred eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc--cEEEEEc
Confidence 679999999999999862 2 33799999865432 335689999999999999999999999987777 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 87 ~~~~~L~~~~ 96 (267)
T cd05066 87 MENGSLDAFL 96 (267)
T ss_pred CCCCCHHHHH
Confidence 9999998876
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.4e-09 Score=107.96 Aligned_cols=83 Identities=19% Similarity=0.304 Sum_probs=71.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+++.||+|.++... ....+.+..|+.++..++|++|+++++++.+.+. .++||||+
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~--~~lv~E~~ 83 (360)
T cd05627 6 LKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRN--LYLIMEFL 83 (360)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE--EEEEEeCC
Confidence 56899999999999997 578999999986432 2234568889999999999999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~gg~L~~~l 92 (360)
T cd05627 84 PGGDMMTLL 92 (360)
T ss_pred CCccHHHHH
Confidence 999999876
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=98.89 E-value=6.6e-09 Score=102.61 Aligned_cols=83 Identities=20% Similarity=0.338 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
...||+|+||.||++.. .++..+|+|.+........+.|.+|+.+++.++|+||+++++++...+. .++++|
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e 87 (280)
T cd05092 10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP--LLMVFE 87 (280)
T ss_pred ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc--eEEEEe
Confidence 67899999999999974 2456899999876665567789999999999999999999999988776 899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 88 ~~~~~~L~~~i 98 (280)
T cd05092 88 YMRHGDLNRFL 98 (280)
T ss_pred cCCCCCHHHHH
Confidence 99999998876
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.4e-09 Score=102.20 Aligned_cols=82 Identities=23% Similarity=0.392 Sum_probs=70.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.++||+|+||.||+|+. .++..+|+|.+... .....++|.+|+.++.+++||||+++++++...+. .++|+||+++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~ 83 (279)
T cd06619 6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENR--ISICTEFMDG 83 (279)
T ss_pred eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCE--EEEEEecCCC
Confidence 57899999999999986 67899999998644 22335679999999999999999999999988776 8999999999
Q ss_pred CChhhh
Q 048796 548 DSLALH 553 (555)
Q Consensus 548 GsL~~~ 553 (555)
|+|..+
T Consensus 84 ~~l~~~ 89 (279)
T cd06619 84 GSLDVY 89 (279)
T ss_pred CChHHh
Confidence 998643
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.2e-09 Score=106.73 Aligned_cols=83 Identities=18% Similarity=0.290 Sum_probs=71.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+|+.+|+|.++.... ...+.+.+|+.++..++|+||+++++++...+. .++||||+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~--~~lv~e~~ 83 (330)
T cd05601 6 KSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDN--LYLVMEYQ 83 (330)
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCe--EEEEECCC
Confidence 57899999999999997 5789999999965322 235668899999999999999999999987766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~~~~L~~~l 92 (330)
T cd05601 84 PGGDLLSLL 92 (330)
T ss_pred CCCCHHHHH
Confidence 999998876
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=98.89 E-value=5.6e-09 Score=105.67 Aligned_cols=83 Identities=23% Similarity=0.310 Sum_probs=70.6
Q ss_pred CCeeecC--CceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRS--SHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G--~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+| +|+.||+++. .+|+.||+|+++.... ...+.+.+|+.+++.++||||++++++|...+. .++|+||
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~--~~lv~e~ 80 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE--LWVVTSF 80 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCE--EEEEEec
Confidence 4579999 7889999987 6899999999965422 224567789999999999999999999988776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 81 ~~~~~l~~~~ 90 (327)
T cd08227 81 MAYGSAKDLI 90 (327)
T ss_pred cCCCcHHHHH
Confidence 9999998875
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.6e-09 Score=107.41 Aligned_cols=83 Identities=22% Similarity=0.312 Sum_probs=73.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
...||+|.|+.|..++. .+|..||+|.+++.. ....+.+.+|+.+|..++|||||+++.+...... +|+||||+.
T Consensus 61 ~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~--lylV~eya~ 138 (596)
T KOG0586|consen 61 IKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEAT--LYLVMEYAS 138 (596)
T ss_pred eeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecce--eEEEEEecc
Confidence 56899999999999997 679999999997642 2334568999999999999999999999998887 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|.++++|
T Consensus 139 ~ge~~~yl 146 (596)
T KOG0586|consen 139 GGELFDYL 146 (596)
T ss_pred CchhHHHH
Confidence 99999987
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.3e-09 Score=101.54 Aligned_cols=83 Identities=14% Similarity=0.288 Sum_probs=72.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|++|.||+++. .+|..+++|.+... .....+++.+|+.++++++||||+++++++...+. .++|+||++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~ 82 (256)
T cd08529 5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGK--LNIVMEYAE 82 (256)
T ss_pred eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCE--EEEEEEeCC
Confidence 56899999999999997 57899999998643 33456789999999999999999999999987766 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+++|.+++
T Consensus 83 ~~~L~~~l 90 (256)
T cd08529 83 NGDLHKLL 90 (256)
T ss_pred CCcHHHHH
Confidence 99999876
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=98.88 E-value=8.3e-09 Score=100.26 Aligned_cols=82 Identities=17% Similarity=0.307 Sum_probs=71.6
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||++.+.++..+|+|.+..... ...+|.+|+.+++.++|||++++++++..... .++++||+++|+
T Consensus 9 ~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~~v~e~~~~~~ 85 (256)
T cd05112 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSP--ICLVFEFMEHGC 85 (256)
T ss_pred EeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCc--eEEEEEcCCCCc
Confidence 678999999999999986688999998865432 35679999999999999999999999887766 899999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 86 L~~~~ 90 (256)
T cd05112 86 LSDYL 90 (256)
T ss_pred HHHHH
Confidence 98875
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.1e-09 Score=104.39 Aligned_cols=82 Identities=20% Similarity=0.404 Sum_probs=67.4
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHc-CCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGS-MRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~-l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
+.||+|+||.||+|+. .+++.||||.++... ....+.+..|..++.. .+||||+++++++.+.+. .++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~--~~lv~ey~ 78 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKEN--LFFVMEYL 78 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCE--EEEEEeCC
Confidence 3699999999999997 568899999986532 1224556777777775 599999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 79 ~~g~L~~~l 87 (316)
T cd05619 79 NGGDLMFHI 87 (316)
T ss_pred CCCcHHHHH
Confidence 999998775
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=98.88 E-value=8.3e-09 Score=100.98 Aligned_cols=83 Identities=16% Similarity=0.314 Sum_probs=71.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+++.+|||.+... .......|.+|+.+++.++||||+++++++...+. .++++||+
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~~v~e~~ 84 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNE--LNIVLELA 84 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCe--EEEEEEec
Confidence 67899999999999997 57899999987542 22334678999999999999999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 85 ~~~~L~~~~ 93 (267)
T cd08228 85 DAGDLSQMI 93 (267)
T ss_pred CCCcHHHHH
Confidence 999998765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.1e-09 Score=102.26 Aligned_cols=83 Identities=23% Similarity=0.397 Sum_probs=70.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh----------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV----------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQER 538 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~----------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~ 538 (555)
.+.||+|+||.||+|.. .+|+.+|+|.++.... ...+.+..|+.+++.++|+||+++++++...+. .
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~ 83 (272)
T cd06629 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY--L 83 (272)
T ss_pred cceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc--e
Confidence 67899999999999986 5789999998753211 013468889999999999999999999987776 9
Q ss_pred EEEEeccCCCChhhhh
Q 048796 539 LLLADYIQGDSLALHL 554 (555)
Q Consensus 539 ~lv~e~~~~GsL~~~l 554 (555)
++|+||+++|+|.+++
T Consensus 84 ~lv~e~~~~~~L~~~l 99 (272)
T cd06629 84 SIFLEYVPGGSIGSCL 99 (272)
T ss_pred EEEEecCCCCcHHHHH
Confidence 9999999999998876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.3e-09 Score=103.63 Aligned_cols=83 Identities=23% Similarity=0.343 Sum_probs=69.4
Q ss_pred CCeeecCCceEEEEEEe-CCCC--EEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGH--MLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~--~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+. .++. .+|+|.+.... ....+.|.+|+.++.++ +|+||+++++++...+. .++|+||
T Consensus 12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~--~~lv~e~ 89 (303)
T cd05088 12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY--LYLAIEY 89 (303)
T ss_pred eeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCC--ceEEEEe
Confidence 67899999999999997 4554 45788776432 23456789999999999 89999999999988777 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 90 ~~~~~L~~~l 99 (303)
T cd05088 90 APHGNLLDFL 99 (303)
T ss_pred CCCCcHHHHH
Confidence 9999998876
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.9e-09 Score=102.69 Aligned_cols=83 Identities=19% Similarity=0.351 Sum_probs=72.3
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .++..+++|.+........+.+.+|+.++++++|+||+++++++...+. .++|||
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e 87 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP--LIMVFE 87 (291)
T ss_pred eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc--eEEEEe
Confidence 67899999999999974 2355789999876655556789999999999999999999999988777 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 88 ~~~~~~L~~~i 98 (291)
T cd05094 88 YMKHGDLNKFL 98 (291)
T ss_pred cCCCCcHHHHH
Confidence 99999999876
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.9e-09 Score=104.95 Aligned_cols=82 Identities=23% Similarity=0.315 Sum_probs=68.7
Q ss_pred CCeeecCCceEEEEEEe-CCCC----EEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGH----MLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~----~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|++ .+|. .||+|.+.... ....++|.+|+.+++.++||||++++|+|... . .++++|
T Consensus 12 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~--~~~v~e 88 (316)
T cd05108 12 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T--VQLITQ 88 (316)
T ss_pred eeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-C--ceeeee
Confidence 67899999999999986 3444 38999986543 33467899999999999999999999999764 3 689999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 89 ~~~~g~l~~~l 99 (316)
T cd05108 89 LMPFGCLLDYV 99 (316)
T ss_pred cCCCCCHHHHH
Confidence 99999998876
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=98.87 E-value=1e-08 Score=100.27 Aligned_cols=85 Identities=21% Similarity=0.362 Sum_probs=70.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-----hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-----VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-----~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.++||+|+||.||+|.. .+|..||+|.+.... ....+.+.+|+.++.+++||||+++++++.+......++++|
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFME 86 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEE
Confidence 78999999999999997 578999999885321 122457889999999999999999999886643323789999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 87 ~~~~~~L~~~l 97 (265)
T cd06652 87 HMPGGSIKDQL 97 (265)
T ss_pred ecCCCcHHHHH
Confidence 99999998875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=98.87 E-value=6.6e-09 Score=103.07 Aligned_cols=83 Identities=19% Similarity=0.339 Sum_probs=72.0
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||++.. .++..+|+|.+........+.+.+|+.++.+++||||+++++++...+. .++|||
T Consensus 10 ~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e 87 (288)
T cd05093 10 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP--LIMVFE 87 (288)
T ss_pred ccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc--cEEEEE
Confidence 77899999999999974 2345689999876555556789999999999999999999999988777 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 88 ~~~~~~L~~~i 98 (288)
T cd05093 88 YMKHGDLNKFL 98 (288)
T ss_pred cCCCCCHHHHH
Confidence 99999998876
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.8e-09 Score=105.33 Aligned_cols=82 Identities=18% Similarity=0.261 Sum_probs=68.9
Q ss_pred CeeecCCceEEEEEEeC-CC-------CEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 471 EVLGRSSHGTLYKATLD-SG-------HMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~-~g-------~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
+.||+|+||.||+|... .+ ..+|+|.+........+.|.+|+.+++.++||||+++++++...+. .++||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~--~~lv~ 78 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDE--SIMVQ 78 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCC--cEEEE
Confidence 36999999999999862 22 3488888765554556789999999999999999999999988766 89999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 79 e~~~~g~L~~~l 90 (258)
T cd05078 79 EYVKFGSLDTYL 90 (258)
T ss_pred ecCCCCcHHHHH
Confidence 999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=98.87 E-value=7.2e-09 Score=104.62 Aligned_cols=82 Identities=20% Similarity=0.393 Sum_probs=68.0
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
++||+|+||.||+|+. .+++.||||.+.... ....+.+..|..++..+ +||||+++++++...+. .++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~--~~lv~E~~ 78 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDR--LFFVMEYV 78 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCe--EEEEEeCC
Confidence 3699999999999997 568899999986532 22345677888888865 79999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 79 ~~~~L~~~l 87 (321)
T cd05591 79 NGGDLMFQI 87 (321)
T ss_pred CCCcHHHHH
Confidence 999998765
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=98.87 E-value=7.9e-09 Score=101.36 Aligned_cols=81 Identities=20% Similarity=0.264 Sum_probs=66.9
Q ss_pred eeecCCceEEEEEEeCCC---CEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 472 VLGRSSHGTLYKATLDSG---HMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 472 ~lG~G~~g~vy~~~~~~g---~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.||+|+||.||+|+..++ ..+++|.+.... ....+.|.+|+.+++.++||||++++++|..... .++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIP--YLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCc--cEEEEecCCC
Confidence 599999999999985332 346677665433 2346789999999999999999999999988777 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 80 ~~L~~~l 86 (268)
T cd05086 80 GDLKSYL 86 (268)
T ss_pred CcHHHHH
Confidence 9999876
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=98.87 E-value=7.4e-09 Score=101.26 Aligned_cols=82 Identities=20% Similarity=0.284 Sum_probs=68.3
Q ss_pred CeeecCCceEEEEEEeCC-------------CCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCce
Q 048796 471 EVLGRSSHGTLYKATLDS-------------GHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQE 537 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~-------------g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~ 537 (555)
+.||+|+||.||+|++.. ...+|+|.+..........|.+|+.+++.++||||+++++++.....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~-- 78 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE-- 78 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC--
Confidence 368999999999998521 23588898866554456788999999999999999999999987776
Q ss_pred EEEEEeccCCCChhhhh
Q 048796 538 RLLLADYIQGDSLALHL 554 (555)
Q Consensus 538 ~~lv~e~~~~GsL~~~l 554 (555)
.++||||+++|+|..++
T Consensus 79 ~~lv~e~~~~~~l~~~~ 95 (262)
T cd05077 79 NIMVEEFVEFGPLDLFM 95 (262)
T ss_pred CEEEEecccCCCHHHHH
Confidence 89999999999988765
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.87 E-value=6.5e-09 Score=103.53 Aligned_cols=83 Identities=23% Similarity=0.426 Sum_probs=69.4
Q ss_pred CCeeecCCceEEEEEEeCC---------------CCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC
Q 048796 470 AEVLGRSSHGTLYKATLDS---------------GHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP 533 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~---------------g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~ 533 (555)
.+.||+|+||.||+++... ...||+|.++... ......|.+|+.++.+++|+||+++++++...
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 89 (295)
T cd05097 10 KEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSD 89 (295)
T ss_pred hhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCC
Confidence 6789999999999987521 2358999986542 22356799999999999999999999999887
Q ss_pred CCceEEEEEeccCCCChhhhh
Q 048796 534 REQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 534 ~~~~~~lv~e~~~~GsL~~~l 554 (555)
+. .++||||+++|+|.+++
T Consensus 90 ~~--~~lv~e~~~~~~L~~~l 108 (295)
T cd05097 90 DP--LCMITEYMENGDLNQFL 108 (295)
T ss_pred Cc--cEEEEecCCCCcHHHHH
Confidence 77 99999999999998875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=98.87 E-value=1e-08 Score=101.16 Aligned_cols=85 Identities=25% Similarity=0.393 Sum_probs=71.2
Q ss_pred CCeeecCCceEEEEEEeC-----CCCEEEEEEeccCChh-cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATLD-----SGHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-----~g~~vavK~l~~~~~~-~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||++++. ++..+|||.+...... ..+.|.+|+.+++.++|+||+++++++........++++|
T Consensus 9 ~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 88 (284)
T cd05038 9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIME 88 (284)
T ss_pred heeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEe
Confidence 578999999999999862 3678999999754432 4678999999999999999999999987633223899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 89 ~~~~~~l~~~l 99 (284)
T cd05038 89 YLPSGSLRDYL 99 (284)
T ss_pred cCCCCCHHHHH
Confidence 99999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=98.86 E-value=8.5e-09 Score=104.05 Aligned_cols=82 Identities=24% Similarity=0.465 Sum_probs=66.4
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHH-HHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVK-KIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~-~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
++||+|+||.||+|+. .+|+.||+|.+..... .....+..|+. +++.++||||+++++++...+. .++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~--~~lv~e~~ 78 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEK--LYFVLDYV 78 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCE--EEEEEcCC
Confidence 3699999999999997 5789999999864321 22345556654 5788999999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 79 ~~~~L~~~l 87 (321)
T cd05603 79 NGGELFFHL 87 (321)
T ss_pred CCCCHHHHH
Confidence 999998764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.6e-09 Score=104.85 Aligned_cols=82 Identities=24% Similarity=0.459 Sum_probs=68.2
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
++||+|+||.||+++. .+++.||||.+.... ....+.+..|+.++..+ +||||+++++++...+. .++||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~--~~iv~Ey~ 78 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDR--LFFVMEFV 78 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCE--EEEEEcCC
Confidence 3699999999999997 578999999986432 12345677888888776 69999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 79 ~~g~L~~~i 87 (320)
T cd05590 79 NGGDLMFHI 87 (320)
T ss_pred CCchHHHHH
Confidence 999998765
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=98.86 E-value=8.6e-09 Score=100.91 Aligned_cols=83 Identities=19% Similarity=0.309 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+++. .+++.+|+|.++.........+.+|+.+++.++||||+++++++...+. .++|+||+++|
T Consensus 14 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~--~~lv~e~~~~~ 91 (267)
T cd06645 14 IQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDK--LWICMEFCGGG 91 (267)
T ss_pred HHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE--EEEEEeccCCC
Confidence 56899999999999987 5789999999876544445678899999999999999999999987776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 92 ~L~~~~ 97 (267)
T cd06645 92 SLQDIY 97 (267)
T ss_pred cHHHHH
Confidence 998865
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.7e-09 Score=105.37 Aligned_cols=83 Identities=20% Similarity=0.253 Sum_probs=70.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+++. .+++.+|+|.+.... ....+.|.+|+.++..++|++|+++++++...+. .++||||+
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~--~~lv~ey~ 83 (332)
T cd05623 6 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENN--LYLVMDYY 83 (332)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCE--EEEEEecc
Confidence 57899999999999997 467889999985421 1224558889999999999999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~~g~L~~~l 92 (332)
T cd05623 84 VGGDLLTLL 92 (332)
T ss_pred CCCcHHHHH
Confidence 999999886
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-09 Score=106.07 Aligned_cols=80 Identities=23% Similarity=0.380 Sum_probs=63.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCc---eEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ---ERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~---~~~lv~e~~ 545 (555)
.+++|+|+||.||+|.. .++..||||+.-...+. --+|..+|+.++|||||+|..++.....+ .+.+|+|||
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym 104 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM 104 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence 68999999999999997 56899999988443321 13688899999999999999888654433 245799999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+. +|++.+
T Consensus 105 P~-tL~~~~ 112 (364)
T KOG0658|consen 105 PE-TLYRVI 112 (364)
T ss_pred hH-HHHHHH
Confidence 98 787765
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.6e-09 Score=108.12 Aligned_cols=83 Identities=23% Similarity=0.336 Sum_probs=72.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ....+.+..|+.++..++|+||+++++++...+. .++||||+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~--~~lv~e~~ 83 (350)
T cd05573 6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEH--LYLVMEYM 83 (350)
T ss_pred EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCe--EEEEEcCC
Confidence 56899999999999997 579999999986432 1235678999999999999999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~~~~L~~~l 92 (350)
T cd05573 84 PGGDLMNLL 92 (350)
T ss_pred CCCCHHHHH
Confidence 999998876
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=98.86 E-value=8.6e-09 Score=100.86 Aligned_cols=83 Identities=19% Similarity=0.340 Sum_probs=71.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC------hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL------VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~------~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
++.||+|+||.||++.. .++..+|+|.+.... ....+.+.+|+.++++++|+||+++++++...+. .++|+
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--~~~v~ 82 (268)
T cd06630 5 GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSH--FNLFV 82 (268)
T ss_pred cceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCe--EEEEE
Confidence 67899999999999986 678999999886432 1124678999999999999999999999987776 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 83 e~~~~~~L~~~l 94 (268)
T cd06630 83 EWMAGGSVSHLL 94 (268)
T ss_pred eccCCCcHHHHH
Confidence 999999998875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=98.86 E-value=8.9e-09 Score=102.13 Aligned_cols=83 Identities=19% Similarity=0.264 Sum_probs=69.8
Q ss_pred CCeeecCCceEEEEEEeC------CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|... .+..||+|.+..... .....+.+|+.+++.++||||+++++++..... .++||
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~lv~ 88 (288)
T cd05061 11 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP--TLVVM 88 (288)
T ss_pred eeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC--cEEEE
Confidence 678999999999999752 245799998864432 234568899999999999999999999987776 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 89 e~~~~g~L~~~l 100 (288)
T cd05061 89 ELMAHGDLKSYL 100 (288)
T ss_pred eCCCCCCHHHHH
Confidence 999999999876
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=98.86 E-value=8.2e-09 Score=104.05 Aligned_cols=82 Identities=22% Similarity=0.424 Sum_probs=68.4
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
++||+|+||.||+++. .++..||||.+.... ......+..|+.++..+ +||||+++++++...+. .++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~--~~lv~e~~ 78 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDR--LFFVMEYV 78 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCE--EEEEEcCC
Confidence 3699999999999997 568899999986532 22345677888888877 79999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 79 ~~~~L~~~~ 87 (318)
T cd05570 79 NGGDLMFHI 87 (318)
T ss_pred CCCCHHHHH
Confidence 999998765
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.6e-09 Score=80.16 Aligned_cols=61 Identities=46% Similarity=0.708 Sum_probs=50.3
Q ss_pred CCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcC
Q 048796 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQF 218 (555)
Q Consensus 158 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 218 (555)
++|++|++++|+|+...+..|.++++|+.|++++|.|+...+..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4678888888888877777888888888888888888877777888888888888888875
|
... |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=98.85 E-value=9.5e-09 Score=103.90 Aligned_cols=82 Identities=24% Similarity=0.429 Sum_probs=66.5
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHH-HHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVK-KIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~-~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
++||+|+||.||+++. .+|+.+|+|.+.... ....+.+..|.. +++.++||||+++++++...+. .++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~--~~lv~e~~ 78 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEK--LYFVLDFV 78 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCE--EEEEEcCC
Confidence 3699999999999997 679999999986432 123345666665 4678999999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 79 ~~~~L~~~l 87 (325)
T cd05604 79 NGGELFFHL 87 (325)
T ss_pred CCCCHHHHH
Confidence 999998765
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=98.85 E-value=1e-08 Score=105.71 Aligned_cols=83 Identities=18% Similarity=0.234 Sum_probs=71.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+++.+|+|.+... .....+.+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~--~~lv~Ey~ 125 (371)
T cd05622 48 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY--LYMVMEYM 125 (371)
T ss_pred EEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE--EEEEEcCC
Confidence 67899999999999997 57889999998542 12234568899999999999999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 126 ~gg~L~~~~ 134 (371)
T cd05622 126 PGGDLVNLM 134 (371)
T ss_pred CCCcHHHHH
Confidence 999998775
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.5e-09 Score=109.51 Aligned_cols=83 Identities=20% Similarity=0.362 Sum_probs=73.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
++.||.|+.|.|..|+. .+|+.+|||.+..+.. .....+.+||.+|+-+.|||++.|+.++....+ +|+|.||+
T Consensus 17 gkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~--lylvlEyv 94 (786)
T KOG0588|consen 17 GKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQH--LYLVLEYV 94 (786)
T ss_pred cccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCce--EEEEEEec
Confidence 88999999999999997 7999999999965422 224568899999999999999999999988777 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|.|+++|
T Consensus 95 ~gGELFdyl 103 (786)
T KOG0588|consen 95 PGGELFDYL 103 (786)
T ss_pred CCchhHHHH
Confidence 999999886
|
|
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=98.85 E-value=9.3e-09 Score=100.27 Aligned_cols=81 Identities=21% Similarity=0.384 Sum_probs=70.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|...+++.+|+|.+..... ..+.|.+|+.++++++|+||+++++++. .+. .++++||+++|+
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~--~~~v~e~~~~~~ 86 (260)
T cd05067 11 VKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEP--IYIITEYMENGS 86 (260)
T ss_pred eeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCC--cEEEEEcCCCCC
Confidence 678999999999999988889999999875433 3568999999999999999999999874 344 899999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 87 L~~~~ 91 (260)
T cd05067 87 LVDFL 91 (260)
T ss_pred HHHHH
Confidence 98875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.3e-08 Score=101.73 Aligned_cols=91 Identities=25% Similarity=0.299 Sum_probs=74.1
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEe------CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcC-CCCcceeeeEEEE
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSM-RHPNIVPLRAYYW 531 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l-~H~niv~l~g~~~ 531 (555)
+..+++.. .+.||+|+||.||++.. ..+..+|||.++.... ...+.+.+|+.+++++ +||||+++++++.
T Consensus 32 ~~~~~~~~--~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 109 (302)
T cd05055 32 FPRNNLSF--GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACT 109 (302)
T ss_pred ccHHHeEE--cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEe
Confidence 44444444 78999999999999974 2345799998865432 3356789999999999 7999999999998
Q ss_pred cCCCceEEEEEeccCCCChhhhh
Q 048796 532 GPREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 532 ~~~~~~~~lv~e~~~~GsL~~~l 554 (555)
..+. .++++||+++|+|.+++
T Consensus 110 ~~~~--~~lv~e~~~~~~L~~~i 130 (302)
T cd05055 110 IGGP--ILVITEYCCYGDLLNFL 130 (302)
T ss_pred cCCc--eEEEEEcCCCCcHHHHH
Confidence 8777 99999999999998876
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=98.85 E-value=6.7e-09 Score=104.99 Aligned_cols=83 Identities=27% Similarity=0.422 Sum_probs=67.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHH---HcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKI---GSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l---~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|+.||||.++... ....+.+.+|++++ +.++||||+++++++...+. .++||
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~--~~lv~ 81 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDH--VCFVM 81 (324)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCE--EEEEE
Confidence 46899999999999997 578999999996432 12234566666554 57789999999999988776 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|..++
T Consensus 82 E~~~~~~L~~~~ 93 (324)
T cd05589 82 EYAAGGDLMMHI 93 (324)
T ss_pred cCCCCCcHHHHh
Confidence 999999998765
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.2e-08 Score=98.91 Aligned_cols=82 Identities=28% Similarity=0.430 Sum_probs=71.8
Q ss_pred CeeecCCceEEEEEEeCCCCEEEEEEeccCChh-cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~-~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
++||+|+||.||++...+++.+|+|.+...... ..+.|.+|+.+++.++|+||+++++++..... .++|+||+++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQP--IYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCC--eEEEEEcCCCCc
Confidence 369999999999999856999999998654333 45789999999999999999999999988777 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 79 l~~~l 83 (251)
T cd05041 79 LLTFL 83 (251)
T ss_pred HHHHH
Confidence 98876
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.2e-08 Score=101.38 Aligned_cols=82 Identities=22% Similarity=0.312 Sum_probs=69.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .++..||+|.++.... .....+.+|+.+++.++||||+++++++...+. .++||||+++
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~~~~ 87 (288)
T cd07871 10 LDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERC--LTLVFEYLDS 87 (288)
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCe--EEEEEeCCCc
Confidence 67899999999999987 5789999999864332 234568899999999999999999999987666 9999999985
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
+|.+++
T Consensus 88 -~l~~~l 93 (288)
T cd07871 88 -DLKQYL 93 (288)
T ss_pred -CHHHHH
Confidence 887765
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.85 E-value=7e-09 Score=101.82 Aligned_cols=92 Identities=18% Similarity=0.239 Sum_probs=75.1
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh---cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR---HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE 535 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~ 535 (555)
+.+++++. -..||+|..|+||.+++ .++..+|+|++.+.... .....+.|-++++.++||-++.||+.+.+++.
T Consensus 74 l~l~~f~l--lk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~ 151 (459)
T KOG0610|consen 74 LGLRHFRL--LKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKY 151 (459)
T ss_pred cCHHHHHH--HHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccce
Confidence 44444444 56899999999999998 45689999999764332 23446678889999999999999999998888
Q ss_pred ceEEEEEeccCCCChhhhhC
Q 048796 536 QERLLLADYIQGDSLALHLY 555 (555)
Q Consensus 536 ~~~~lv~e~~~~GsL~~~l~ 555 (555)
.+++||||+||+|+.+.|
T Consensus 152 --~cl~meyCpGGdL~~Lrq 169 (459)
T KOG0610|consen 152 --SCLVMEYCPGGDLHSLRQ 169 (459)
T ss_pred --eEEEEecCCCccHHHHHh
Confidence 999999999999987754
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.2e-08 Score=101.96 Aligned_cols=82 Identities=23% Similarity=0.331 Sum_probs=68.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+++.+|||.+..... .....+.+|+.+++.++||||+++++++...+. .++||||++
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~~~- 86 (303)
T cd07869 10 LEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKET--LTLVFEYVH- 86 (303)
T ss_pred eeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCe--EEEEEECCC-
Confidence 67899999999999997 4789999999865332 224567889999999999999999999987776 999999996
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 87 ~~l~~~~ 93 (303)
T cd07869 87 TDLCQYM 93 (303)
T ss_pred cCHHHHH
Confidence 5776554
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.1e-08 Score=101.23 Aligned_cols=83 Identities=19% Similarity=0.297 Sum_probs=70.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||++.. .+++.+|+|.+..... .....+.+|+.+++.++|+||+++.+++...+. .++++||+
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~--~~lv~e~~ 82 (285)
T cd05632 5 YRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDA--LCLVLTIM 82 (285)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCE--EEEEEEec
Confidence 46899999999999997 6789999999865322 223557889999999999999999999887776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 83 ~~~~L~~~~ 91 (285)
T cd05632 83 NGGDLKFHI 91 (285)
T ss_pred cCccHHHHH
Confidence 999998765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.1e-08 Score=103.16 Aligned_cols=82 Identities=21% Similarity=0.378 Sum_probs=66.1
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHc-CCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGS-MRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~-l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
++||+|+||.||+|+. .+++.||||.++... ....+.+..|..++.. .+||||+++++++...+. .++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~--~~lv~e~~ 78 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEH--LFFVMEYL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCE--EEEEEcCC
Confidence 3699999999999997 568899999986432 1234455667776664 589999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 79 ~gg~L~~~~ 87 (316)
T cd05592 79 NGGDLMFHI 87 (316)
T ss_pred CCCcHHHHH
Confidence 999998765
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=98.84 E-value=1e-08 Score=101.66 Aligned_cols=83 Identities=19% Similarity=0.294 Sum_probs=70.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||++.. .+++.+|||.+..... ...+.+.+|+.++++++|++++++.+.+...+. .++||||+
T Consensus 5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~--~~lv~e~~ 82 (285)
T cd05630 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDA--LCLVLTLM 82 (285)
T ss_pred eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCE--EEEEEEec
Confidence 46899999999999997 5789999999864322 223557889999999999999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 83 ~g~~L~~~l 91 (285)
T cd05630 83 NGGDLKFHI 91 (285)
T ss_pred CCCcHHHHH
Confidence 999998775
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.4e-08 Score=101.01 Aligned_cols=83 Identities=18% Similarity=0.380 Sum_probs=73.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .++..+|+|.+........+.+.+|+.+++.++|+||+++++++..... .++||||+++|
T Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~ 94 (292)
T cd06644 17 IGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGK--LWIMIEFCPGG 94 (292)
T ss_pred hheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCe--EEEEEecCCCC
Confidence 66899999999999997 5689999999976655556789999999999999999999999887766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|..++
T Consensus 95 ~l~~~~ 100 (292)
T cd06644 95 AVDAIM 100 (292)
T ss_pred cHHHHH
Confidence 987654
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=98.84 E-value=1e-08 Score=101.57 Aligned_cols=83 Identities=24% Similarity=0.349 Sum_probs=71.4
Q ss_pred CCeeecCCceEEEEEEeC------CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
...||+|+||.||++... ++..+|+|.+..... ...++|.+|+.++++++||||++++++|...+. .++++
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~--~~lv~ 87 (288)
T cd05050 10 VRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP--MCLLF 87 (288)
T ss_pred cccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc--cEEEE
Confidence 678999999999999852 467899999865432 335679999999999999999999999987776 89999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 88 e~~~~~~L~~~l 99 (288)
T cd05050 88 EYMAYGDLNEFL 99 (288)
T ss_pred ecCCCCCHHHHH
Confidence 999999998876
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.5e-08 Score=99.22 Aligned_cols=83 Identities=22% Similarity=0.490 Sum_probs=70.7
Q ss_pred CCeeecCCceEEEEEEeC-CC---CEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD-SG---HMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g---~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+.. ++ ..+|+|.+.... ....+.|..|+.++++++|+||+++.+++...+. .++||||
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~ 87 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP--AMIITEY 87 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCC--cEEEEEc
Confidence 789999999999999973 33 379999986542 2335679999999999999999999999988777 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 88 ~~~~~L~~~~ 97 (268)
T cd05063 88 MENGALDKYL 97 (268)
T ss_pred CCCCCHHHHH
Confidence 9999998875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.1e-08 Score=100.84 Aligned_cols=83 Identities=16% Similarity=0.312 Sum_probs=72.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|.. .++..+|+|.+.... ....+.+.+|+.+++.++|+||+++++++.+... .++||||+++
T Consensus 9 ~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~ 86 (277)
T cd06640 9 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTK--LWIIMEYLGG 86 (277)
T ss_pred hhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCE--EEEEEecCCC
Confidence 56799999999999997 468899999886433 3345779999999999999999999999988776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 87 ~~L~~~i 93 (277)
T cd06640 87 GSALDLL 93 (277)
T ss_pred CcHHHHH
Confidence 9998875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.3e-08 Score=100.62 Aligned_cols=83 Identities=22% Similarity=0.398 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|.. .++..+|+|.+........+.|.+|+.+++.++||||+++++++...+. .++|+||+++|
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~--~~~v~e~~~~~ 87 (282)
T cd06643 10 IGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENN--LWILIEFCAGG 87 (282)
T ss_pred HhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCE--EEEEEEecCCC
Confidence 46799999999999997 4678899999876555556789999999999999999999999987766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 88 ~l~~~~ 93 (282)
T cd06643 88 AVDAVM 93 (282)
T ss_pred cHHHHH
Confidence 998764
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.4e-08 Score=99.23 Aligned_cols=83 Identities=17% Similarity=0.342 Sum_probs=71.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|.. .+|+.+|+|.++.. .....+.+.+|+.++++++|+||+++++++...+. .++||||+
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~--~~lv~e~~ 84 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNE--LNIVLELA 84 (267)
T ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCe--EEEEEecC
Confidence 67899999999999998 48999999988532 22335679999999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 85 ~~~~L~~~l 93 (267)
T cd08224 85 DAGDLSRMI 93 (267)
T ss_pred CCCCHHHHH
Confidence 999998765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.8e-08 Score=98.54 Aligned_cols=83 Identities=24% Similarity=0.407 Sum_probs=70.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh---------cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR---------HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~---------~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 539 (555)
+..||+|+||.||+|.. .++..+|+|.+...... ..+.+.+|+.++.+++||||+++++++...+. .+
T Consensus 5 ~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~ 82 (267)
T cd06628 5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH--LN 82 (267)
T ss_pred cceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc--cE
Confidence 67899999999999987 56889999988543221 12568899999999999999999999988776 89
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+++||+++++|.+++
T Consensus 83 lv~e~~~~~~L~~~l 97 (267)
T cd06628 83 IFLEYVPGGSVAALL 97 (267)
T ss_pred EEEEecCCCCHHHHH
Confidence 999999999998775
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.2e-08 Score=98.05 Aligned_cols=85 Identities=20% Similarity=0.370 Sum_probs=70.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-----hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-----VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-----~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.++||+|+||.||++.. .++..+|+|.+.... .+..+.+.+|+.+++.++||||+++++++........++++|
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e 86 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFME 86 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEe
Confidence 78999999999999987 568999999885321 123456889999999999999999999887543334889999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 87 ~~~~~~L~~~l 97 (266)
T cd06651 87 YMPGGSVKDQL 97 (266)
T ss_pred CCCCCcHHHHH
Confidence 99999998875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.5e-09 Score=79.04 Aligned_cols=59 Identities=41% Similarity=0.549 Sum_probs=32.6
Q ss_pred CccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCc
Q 048796 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ 112 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 112 (555)
+|++|+|++|+|+...+..|.++++|++|++++|+|+...+..|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 45555555555554444455555555555555555555555555555555555555554
|
... |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=98.83 E-value=8.8e-09 Score=100.19 Aligned_cols=80 Identities=20% Similarity=0.331 Sum_probs=66.5
Q ss_pred CeeecCCceEEEEEEeCC-C----------CEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEE
Q 048796 471 EVLGRSSHGTLYKATLDS-G----------HMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~-g----------~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 539 (555)
+.||+|+||.||+|...+ + ..+++|.+...... ...|.+|+.+++.++||||+++++++.. .. .+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~--~~ 76 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DE--NI 76 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CC--cE
Confidence 368999999999999843 3 24777876544332 6789999999999999999999999987 55 89
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+|+||+++|+|.+++
T Consensus 77 lv~e~~~~~~L~~~l 91 (259)
T cd05037 77 MVEEYVKFGPLDVFL 91 (259)
T ss_pred EEEEcCCCCcHHHHH
Confidence 999999999998876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.5e-08 Score=98.57 Aligned_cols=83 Identities=17% Similarity=0.319 Sum_probs=71.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.++||+|+||.||.++. .++..+++|.+... .....+.+.+|+.++++++|+||+++++++...+. .+++|||++
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~--~~~~~e~~~ 82 (256)
T cd08221 5 IRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNT--LLIEMEYAN 82 (256)
T ss_pred eeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCe--EEEEEEecC
Confidence 57899999999999886 67899999988643 23345678999999999999999999999988766 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 83 ~~~L~~~~ 90 (256)
T cd08221 83 GGTLYDKI 90 (256)
T ss_pred CCcHHHHH
Confidence 99999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=98.83 E-value=6.9e-09 Score=102.27 Aligned_cols=83 Identities=18% Similarity=0.322 Sum_probs=71.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|+.++++++||||+++++++..... .++|+||+++
T Consensus 9 ~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~ 86 (277)
T cd06642 9 LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTK--LWIIMEYLGG 86 (277)
T ss_pred HHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCc--eEEEEEccCC
Confidence 45799999999999987 568899999886433 2345679999999999999999999999988776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 87 ~~L~~~~ 93 (277)
T cd06642 87 GSALDLL 93 (277)
T ss_pred CcHHHHh
Confidence 9998875
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.3e-08 Score=99.36 Aligned_cols=83 Identities=27% Similarity=0.450 Sum_probs=72.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|.. .+++.+|+|.+..... ...+.+.+|+.++++++|+||+++++++...+. .++|+||++
T Consensus 5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~--~~lv~e~~~ 82 (264)
T cd06626 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREK--VYIFMEYCS 82 (264)
T ss_pred eeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCE--EEEEEecCC
Confidence 57899999999999997 5789999999865433 356789999999999999999999999887766 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+++|.+++
T Consensus 83 ~~~L~~~~ 90 (264)
T cd06626 83 GGTLEELL 90 (264)
T ss_pred CCcHHHHH
Confidence 99999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.4e-08 Score=99.95 Aligned_cols=83 Identities=22% Similarity=0.337 Sum_probs=70.4
Q ss_pred CCeeecCCceEEEEEEeC------CCCEEEEEEeccCChh-cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~~-~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
...||+|+||.||+|+.. +...+|+|.+...... ..+.|.+|+.++++++|+||+++++++...+. .++|+
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~ 87 (275)
T cd05046 10 ITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP--HYMIL 87 (275)
T ss_pred eeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc--ceEEE
Confidence 568999999999999862 3467999988654333 35779999999999999999999999987766 89999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 88 e~~~~~~L~~~i 99 (275)
T cd05046 88 EYTDLGDLKQFL 99 (275)
T ss_pred EecCCCcHHHHH
Confidence 999999999876
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.4e-08 Score=102.58 Aligned_cols=82 Identities=26% Similarity=0.469 Sum_probs=66.2
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHH-HHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVK-KIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~-~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
++||+|+||.||+|+. .+|+.||||.+..... ...+.+..|.. +++.++||||+++++++...+. .++||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~--~~lv~e~~ 78 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADK--LYFVLDYV 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCE--EEEEEcCC
Confidence 3699999999999997 5799999999864321 22344555554 5678999999999999987766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 79 ~~g~L~~~l 87 (323)
T cd05575 79 NGGELFFHL 87 (323)
T ss_pred CCCCHHHHH
Confidence 999998765
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=98.83 E-value=6.7e-09 Score=102.83 Aligned_cols=83 Identities=18% Similarity=0.287 Sum_probs=71.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||++.. .+|..+|+|.+... .......+.+|+.++.+++|+||+++++++...+. .++|+||+++
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~--~~lv~e~~~~ 83 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGA--VYMCMEYMDA 83 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCe--EEEEEeecCC
Confidence 67899999999999998 47899999988653 22334678999999999999999999999987776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 84 ~~l~~~~ 90 (286)
T cd06622 84 GSLDKLY 90 (286)
T ss_pred CCHHHHH
Confidence 9998765
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.3e-08 Score=101.48 Aligned_cols=83 Identities=22% Similarity=0.387 Sum_probs=73.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||.|+||.||+|+. .+|+.||+|.+........+.+.+|+.+++.++|+||+++++++...+. .++|+||+++|
T Consensus 24 ~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~~ 101 (296)
T cd06655 24 YEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDE--LFVVMEYLAGG 101 (296)
T ss_pred EEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCce--EEEEEEecCCC
Confidence 67899999999999986 6789999999865544456778999999999999999999999987776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 102 ~L~~~~ 107 (296)
T cd06655 102 SLTDVV 107 (296)
T ss_pred cHHHHH
Confidence 998765
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.9e-08 Score=99.15 Aligned_cols=82 Identities=26% Similarity=0.369 Sum_probs=69.4
Q ss_pred CCeeecCCceEEEEEEe-CCCC----EEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGH----MLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~----~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|.+ .+|. .+|+|.+.... .....++.+|+.++++++|+||++++++|.. .. .++|+|
T Consensus 12 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~--~~~v~e 88 (279)
T cd05057 12 IKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQ--VQLITQ 88 (279)
T ss_pred cceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cc--eEEEEe
Confidence 68999999999999997 3343 58999886543 3345789999999999999999999999986 44 899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 89 ~~~~g~L~~~l 99 (279)
T cd05057 89 LMPLGCLLDYV 99 (279)
T ss_pred cCCCCcHHHHH
Confidence 99999999876
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.5e-08 Score=99.68 Aligned_cols=84 Identities=19% Similarity=0.324 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
...||.|+||.||+|+. .++..+|+|.+.... ......+.+|+.+++.++|+||+++++++..... .++|+||+++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~~v~e~~~~ 83 (274)
T cd06609 6 LECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSK--LWIIMEYCGG 83 (274)
T ss_pred hhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCe--EEEEEEeeCC
Confidence 56899999999999997 578899999986543 2335678999999999999999999999987766 9999999999
Q ss_pred CChhhhhC
Q 048796 548 DSLALHLY 555 (555)
Q Consensus 548 GsL~~~l~ 555 (555)
|+|.++++
T Consensus 84 ~~L~~~~~ 91 (274)
T cd06609 84 GSCLDLLK 91 (274)
T ss_pred CcHHHHHh
Confidence 99998763
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.1e-08 Score=97.83 Aligned_cols=83 Identities=20% Similarity=0.359 Sum_probs=71.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-----hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-----RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-----~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|++|.||++.. .++..+|+|.+..... ...+.+.+|+.++++++||||+++++++...+. .++|+|
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~~v~e 84 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDET--LSIFME 84 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCe--EEEEEE
Confidence 78999999999999986 5789999998854321 124578899999999999999999999987776 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 85 ~~~~~~l~~~~ 95 (263)
T cd06625 85 YMPGGSVKDQL 95 (263)
T ss_pred ECCCCcHHHHH
Confidence 99999998765
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=98.82 E-value=2e-08 Score=99.58 Aligned_cols=85 Identities=20% Similarity=0.299 Sum_probs=71.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||.|++|.||++.. .+++.+|+|.+..... ...+.+.+|+.++++++||||++++++|...+....++||||+++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 85 (287)
T cd06621 6 LSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEG 85 (287)
T ss_pred EEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCC
Confidence 46899999999999998 5688999999864322 345779999999999999999999999865443348999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 86 ~~L~~~l 92 (287)
T cd06621 86 GSLDSIY 92 (287)
T ss_pred CCHHHHH
Confidence 9998764
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.82 E-value=5e-09 Score=106.10 Aligned_cols=84 Identities=20% Similarity=0.294 Sum_probs=71.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
+++||+|+|++|++|+. ..++.||||++.+... ...+-...|-..|.++ .||-|++|+.-+.+... +|+|+||
T Consensus 78 g~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s--LYFvLe~ 155 (604)
T KOG0592|consen 78 GKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES--LYFVLEY 155 (604)
T ss_pred hheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc--eEEEEEe
Confidence 99999999999999996 6899999999965422 1234466788888888 89999999999998877 9999999
Q ss_pred cCCCChhhhhC
Q 048796 545 IQGDSLALHLY 555 (555)
Q Consensus 545 ~~~GsL~~~l~ 555 (555)
++||+|.++|+
T Consensus 156 A~nGdll~~i~ 166 (604)
T KOG0592|consen 156 APNGDLLDLIK 166 (604)
T ss_pred cCCCcHHHHHH
Confidence 99999999874
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.5e-08 Score=98.72 Aligned_cols=80 Identities=19% Similarity=0.265 Sum_probs=66.6
Q ss_pred eeecCCceEEEEEEe---CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 472 VLGRSSHGTLYKATL---DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 472 ~lG~G~~g~vy~~~~---~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.||+|+||.||+|++ ..+..||+|.+..... ...+.|.+|+.++++++|+||++++++|.. +. .++|+||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~--~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EA--LMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CC--eEEEEEeCCC
Confidence 389999999999986 2456799999865433 335679999999999999999999998864 44 8999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 79 ~~L~~~l 85 (257)
T cd05115 79 GPLNKFL 85 (257)
T ss_pred CCHHHHH
Confidence 9999876
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.8e-08 Score=99.33 Aligned_cols=83 Identities=23% Similarity=0.347 Sum_probs=70.9
Q ss_pred CCeeecCCceEEEEEEeC------CCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|.+. .+..||+|.+.... ......|.+|+.+++.++|+||+++++++...+. .++||
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~lv~ 88 (277)
T cd05036 11 LRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP--RFILL 88 (277)
T ss_pred eeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC--cEEEE
Confidence 678999999999999973 45779999886443 3335679999999999999999999999887776 89999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 89 e~~~g~~L~~~i 100 (277)
T cd05036 89 ELMAGGDLKSFL 100 (277)
T ss_pred ecCCCCCHHHHH
Confidence 999999999876
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.82 E-value=8.5e-10 Score=109.86 Aligned_cols=83 Identities=19% Similarity=0.371 Sum_probs=69.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||.|+||.||+|+- ..|..||||+++.... .....=.+|+..++++. |||||+|...+.+.+. .+|+|||||+
T Consensus 15 i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~-~L~fVfE~Md 93 (538)
T KOG0661|consen 15 IRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR-ILYFVFEFMD 93 (538)
T ss_pred HHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCc-eEeeeHHhhh
Confidence 67899999999999996 6789999999965432 22233468999999999 9999999999988772 3999999998
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
. +|++++
T Consensus 94 ~-NLYqLm 100 (538)
T KOG0661|consen 94 C-NLYQLM 100 (538)
T ss_pred h-hHHHHH
Confidence 7 788875
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.2e-08 Score=100.41 Aligned_cols=83 Identities=18% Similarity=0.287 Sum_probs=70.1
Q ss_pred CCeeecCCceEEEEEEeC------CCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|... .+..+|||.+.... .....+|.+|+.+++.++|+||+++++++..... .++|+
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~--~~lv~ 88 (277)
T cd05062 11 SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP--TLVIM 88 (277)
T ss_pred eeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC--eEEEE
Confidence 778999999999999752 35679999986432 2345679999999999999999999999987766 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 89 e~~~~~~L~~~~ 100 (277)
T cd05062 89 ELMTRGDLKSYL 100 (277)
T ss_pred ecCCCCCHHHHH
Confidence 999999998876
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.3e-08 Score=97.47 Aligned_cols=81 Identities=23% Similarity=0.379 Sum_probs=70.0
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|...++..+|+|.+..... ..+.|.+|+.++++++|+|++++++++.. .. .+++|||+++|+
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~--~~lv~e~~~~~~ 86 (260)
T cd05070 11 IKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EP--IYIVTEYMSKGS 86 (260)
T ss_pred hheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC-CC--cEEEEEecCCCc
Confidence 678999999999999987788899999865432 35679999999999999999999998753 44 799999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 87 L~~~~ 91 (260)
T cd05070 87 LLDFL 91 (260)
T ss_pred HHHHH
Confidence 98876
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.2e-08 Score=99.29 Aligned_cols=81 Identities=22% Similarity=0.321 Sum_probs=69.5
Q ss_pred CeeecCCceEEEEEEeC--CCC--EEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATLD--SGH--MLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~--~g~--~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
++||+|++|.||+|.+. .++ .+|||.+..... ...+.|.+|+.++++++||||+++++++.. .. .++|+||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~--~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HP--LMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-Ce--EEEEEEec
Confidence 36899999999999973 333 689999976655 456789999999999999999999999887 55 89999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 78 ~~~~L~~~l 86 (257)
T cd05040 78 PLGSLLDRL 86 (257)
T ss_pred CCCcHHHHH
Confidence 999999876
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=98.81 E-value=1e-08 Score=100.25 Aligned_cols=83 Identities=18% Similarity=0.333 Sum_probs=71.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .++..+|||.+... .....++|.+|+.+++.++|+||+++++++...+. .+++|||+
T Consensus 7 ~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~--~~~v~e~~ 84 (267)
T cd08229 7 EKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNE--LNIVLELA 84 (267)
T ss_pred hhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCe--EEEEEEec
Confidence 67899999999999996 68999999987542 22335678999999999999999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 85 ~~~~L~~~~ 93 (267)
T cd08229 85 DAGDLSRMI 93 (267)
T ss_pred CCCCHHHHH
Confidence 999998765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=98.81 E-value=8.4e-09 Score=102.17 Aligned_cols=82 Identities=20% Similarity=0.352 Sum_probs=69.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+++.+|||++.... ....+.+.+|+.+++.++||||+++++++...+. .++||||++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~ 83 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGK--LYLVFEYVE 83 (287)
T ss_pred EEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCE--EEEEEecCC
Confidence 56899999999999998 578899999986432 2335678899999999999999999999987776 999999999
Q ss_pred CCChhhh
Q 048796 547 GDSLALH 553 (555)
Q Consensus 547 ~GsL~~~ 553 (555)
+|.+..+
T Consensus 84 ~~~l~~~ 90 (287)
T cd07848 84 KNMLELL 90 (287)
T ss_pred CCHHHHH
Confidence 9876543
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.2e-08 Score=101.23 Aligned_cols=83 Identities=25% Similarity=0.410 Sum_probs=71.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||++.. .+++.+|+|.+.... ....+.+.+|+.++++++||||+++++++...+. .++||||+
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~~v~e~~ 83 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSN--LYLVMEYV 83 (290)
T ss_pred EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCe--EEEEEecC
Confidence 57899999999999997 578999999986432 2235678899999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~~~~L~~~~ 92 (290)
T cd05580 84 PGGELFSHL 92 (290)
T ss_pred CCCCHHHHH
Confidence 999998876
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.7e-08 Score=100.22 Aligned_cols=83 Identities=23% Similarity=0.312 Sum_probs=69.8
Q ss_pred CCeeecCCceEEEEEEeC------CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|+.. ....+|+|.+..... ...+.+.+|+.+++.++||||++++++|...+. .++++
T Consensus 5 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~ 82 (290)
T cd05045 5 GKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGP--LLLIV 82 (290)
T ss_pred cccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCC--cEEEE
Confidence 678999999999999851 235688998865432 335679999999999999999999999987777 89999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 83 e~~~~~~L~~~l 94 (290)
T cd05045 83 EYAKYGSLRSFL 94 (290)
T ss_pred EecCCCCHHHHH
Confidence 999999999875
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.2e-08 Score=101.77 Aligned_cols=83 Identities=24% Similarity=0.413 Sum_probs=70.1
Q ss_pred CCeeecCCceEEEEEEeC-----------------CCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD-----------------SGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYW 531 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-----------------~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~ 531 (555)
.+.||+|+||.||++... ++..+|+|.+.... ....+.|.+|+.+++.++|+||+++++++.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~ 89 (296)
T cd05095 10 KEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCI 89 (296)
T ss_pred eeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 778999999999998532 24468999987543 334578999999999999999999999998
Q ss_pred cCCCceEEEEEeccCCCChhhhh
Q 048796 532 GPREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 532 ~~~~~~~~lv~e~~~~GsL~~~l 554 (555)
..+. .+++|||+++|+|.+++
T Consensus 90 ~~~~--~~lv~e~~~~~~L~~~l 110 (296)
T cd05095 90 TSDP--LCMITEYMENGDLNQFL 110 (296)
T ss_pred cCCc--cEEEEEeCCCCcHHHHH
Confidence 8777 99999999999998876
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.7e-08 Score=97.97 Aligned_cols=81 Identities=25% Similarity=0.385 Sum_probs=71.9
Q ss_pred CCeeecCCceEEEEEEeC-CCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATLD-SGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|... ++..+|+|.+..... .+++.+|+.++++++|+||+++++++...+. .++++||++++
T Consensus 8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~--~~l~~e~~~~~ 83 (256)
T cd06612 8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTD--LWIVMEYCGAG 83 (256)
T ss_pred hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCc--EEEEEecCCCC
Confidence 678999999999999984 588999999865432 6789999999999999999999999988776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 84 ~L~~~l 89 (256)
T cd06612 84 SVSDIM 89 (256)
T ss_pred cHHHHH
Confidence 998876
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.2e-08 Score=99.61 Aligned_cols=81 Identities=22% Similarity=0.369 Sum_probs=69.1
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|+..+...||+|.+..... ..+.|.+|+.+++.++|+||+++++++.. +. .++||||+++|+
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~--~~lv~e~~~~~~ 86 (262)
T cd05071 11 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP--IYIVTEYMSKGS 86 (262)
T ss_pred eeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CC--cEEEEEcCCCCc
Confidence 678999999999999986666799999875332 35679999999999999999999998753 44 799999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 87 L~~~~ 91 (262)
T cd05071 87 LLDFL 91 (262)
T ss_pred HHHHH
Confidence 98876
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.9e-08 Score=101.76 Aligned_cols=82 Identities=21% Similarity=0.378 Sum_probs=68.8
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
++||+|+||.||+++. .+++.+|||.+..... ...+.+.+|+.++.++ +||||+++++++...+. .++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~--~~lv~e~~ 78 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSR--LFLVIEYV 78 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCE--EEEEEeCC
Confidence 3699999999999997 5788999999975322 2345688899998888 69999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 79 ~~~~L~~~~ 87 (327)
T cd05617 79 NGGDLMFHM 87 (327)
T ss_pred CCCcHHHHH
Confidence 999998764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.7e-08 Score=98.15 Aligned_cols=83 Identities=23% Similarity=0.409 Sum_probs=71.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.+|++.. .+|+.+|+|.+... .....+++.+|+.++++++||||+++.+++...+. .++|+||++
T Consensus 5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~lv~e~~~ 82 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGN--LYIVMDYCE 82 (256)
T ss_pred EEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCe--EEEEEecCC
Confidence 57899999999999986 57899999998542 22345689999999999999999999999987776 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 83 ~~~l~~~~ 90 (256)
T cd08218 83 GGDLYKKI 90 (256)
T ss_pred CCcHHHHH
Confidence 99998765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.5e-09 Score=108.86 Aligned_cols=81 Identities=23% Similarity=0.389 Sum_probs=69.0
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCChhc---HHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRH---KKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~---~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
+.||.|+||.||-++. .+...||||++....++. ..++..|++.+.+++|||++.+.|||..... .|||||||-
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~T--aWLVMEYCl 109 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHT--AWLVMEYCL 109 (948)
T ss_pred HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccch--HHHHHHHHh
Confidence 4699999999999997 678899999997765554 5678999999999999999999999987655 999999997
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
| +-.|+|
T Consensus 110 G-SAsDll 116 (948)
T KOG0577|consen 110 G-SASDLL 116 (948)
T ss_pred c-cHHHHH
Confidence 6 555543
|
|
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.80 E-value=2e-08 Score=98.64 Aligned_cols=82 Identities=23% Similarity=0.348 Sum_probs=68.5
Q ss_pred CeeecCCceEEEEEEe-CCCC--EEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL-DSGH--MLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~--~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
++||+|+||.||+|+. .++. .+|+|.+.... ....+.+.+|+.++.++ +||||+++++++..... .+++|||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~--~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY--LYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCC--ceEEEEeC
Confidence 4699999999999997 3444 46888886433 33456789999999999 89999999999988777 89999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 79 ~~~~L~~~i 87 (270)
T cd05047 79 PHGNLLDFL 87 (270)
T ss_pred CCCcHHHHH
Confidence 999998876
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.80 E-value=5e-09 Score=105.12 Aligned_cols=83 Identities=22% Similarity=0.241 Sum_probs=72.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh--cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR--HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
++.||+|.|+.|-.++. -+|..||||.+++.... ....+++|++.|.-++|||||+||.+..++.. +|||+|.-+
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTK--lyLiLELGD 100 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTK--LYLILELGD 100 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccce--EEEEEEecC
Confidence 77899999999999986 58999999999764332 34567889999999999999999999887766 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|+++|
T Consensus 101 ~GDl~DyI 108 (864)
T KOG4717|consen 101 GGDLFDYI 108 (864)
T ss_pred CchHHHHH
Confidence 99999987
|
|
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=98.80 E-value=2e-08 Score=99.03 Aligned_cols=80 Identities=20% Similarity=0.299 Sum_probs=68.2
Q ss_pred eecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 473 LGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 473 lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
||+|+||.||++.. .+|+.+|+|.+..... ...+.+..|+.+++.++||||+++++++...+. .++|+||+++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~lv~e~~~~~ 78 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDD--LCLVMTLMNGG 78 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCe--EEEEEecCCCC
Confidence 68999999999986 5789999999864322 234567889999999999999999999987776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 79 ~L~~~l 84 (277)
T cd05577 79 DLKYHI 84 (277)
T ss_pred cHHHHH
Confidence 998876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.7e-08 Score=98.38 Aligned_cols=81 Identities=21% Similarity=0.336 Sum_probs=70.2
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||++....+..+|+|.+.... ...+.|.+|+.++++++|+||+++.+++.. .. .+++|||+++|+
T Consensus 11 ~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~--~~~v~e~~~~~~ 86 (260)
T cd05073 11 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EP--IYIITEFMAKGS 86 (260)
T ss_pred EeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CC--eEEEEEeCCCCc
Confidence 67899999999999998677789999886532 235679999999999999999999999876 45 899999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 87 L~~~~ 91 (260)
T cd05073 87 LLDFL 91 (260)
T ss_pred HHHHH
Confidence 98876
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.9e-08 Score=98.18 Aligned_cols=85 Identities=24% Similarity=0.312 Sum_probs=70.0
Q ss_pred CCeeecCCceEEEEEEe-----CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-----DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||+||.+.+ .++..+|+|.+..... ...+.|.+|+.++++++||||+++++++...+....+++||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 88 (283)
T cd05080 9 IRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIME 88 (283)
T ss_pred ceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEec
Confidence 57899999999988753 3678899999865432 34577899999999999999999999987544334899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 89 ~~~~~~l~~~~ 99 (283)
T cd05080 89 YVPLGSLRDYL 99 (283)
T ss_pred CCCCCCHHHHH
Confidence 99999998875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.8e-08 Score=101.42 Aligned_cols=82 Identities=22% Similarity=0.394 Sum_probs=67.2
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHc-CCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGS-MRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~-l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
++||+|+||.||+|+. .+|..||||.++.... ...+.+..|+.++.. .+||||+++++++...+. .++||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~--~~lv~E~~ 78 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEH--LFFVMEFL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCE--EEEEECCC
Confidence 3699999999999997 5789999999865321 234556778777765 589999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 79 ~~g~L~~~i 87 (316)
T cd05620 79 NGGDLMFHI 87 (316)
T ss_pred CCCcHHHHH
Confidence 999998765
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.9e-10 Score=119.55 Aligned_cols=127 Identities=32% Similarity=0.279 Sum_probs=91.0
Q ss_pred CccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCc
Q 048796 102 RLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNM 181 (555)
Q Consensus 102 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l 181 (555)
.|...+.++|++. .....+.-++.|+.|+|++|+++... .+..++.|++|||++|.+....--.-.++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~-----------~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc 232 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD-----------NLRRLPKLKHLDLSYNCLRHVPQLSMVGC 232 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH-----------HHHhcccccccccccchhccccccchhhh
Confidence 5777888888886 66677777888888888888887432 23344888888888888884422223344
Q ss_pred cccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCC---CChhhhcCCCEEEeccCCCCCC
Q 048796 182 GRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGE---IPDKLSLKLNEFNVSYNDLSGP 243 (555)
Q Consensus 182 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~~L~~L~ls~N~l~~~ 243 (555)
. |..|+|++|.++.. ..+.++.+|+.||+++|-|.+. .|-+....|+.|+|.+|++.|-
T Consensus 233 ~-L~~L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 233 K-LQLLNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred h-heeeeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 4 88888998888743 4567888888899999888753 3333336788888888888753
|
|
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.2e-08 Score=100.25 Aligned_cols=83 Identities=13% Similarity=0.243 Sum_probs=71.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||++.. ..++.||+|.+..... ...+.+.+|+.+++.++||||+++++.+...+. .++||||+
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~--~~lv~e~~ 83 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRH--LCMVMEYV 83 (305)
T ss_pred eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCE--EEEEEecC
Confidence 57899999999999997 5688999999865432 234678899999999999999999999987766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~g~~L~~~l 92 (305)
T cd05609 84 EGGDCATLL 92 (305)
T ss_pred CCCcHHHHH
Confidence 999998876
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.2e-09 Score=91.82 Aligned_cols=76 Identities=20% Similarity=0.337 Sum_probs=65.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEecc--CChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRV--GLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~--~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
-+.||+|.||+|+||+. .+++.||+|+++. ...+......+||-+++.++|.|||+++........ +-+|+|||+
T Consensus 7 mekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkk--ltlvfe~cd 84 (292)
T KOG0662|consen 7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK--LTLVFEFCD 84 (292)
T ss_pred HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCce--eEEeHHHhh
Confidence 35799999999999996 6789999998854 333446778899999999999999999999887777 899999997
Q ss_pred C
Q 048796 547 G 547 (555)
Q Consensus 547 ~ 547 (555)
.
T Consensus 85 q 85 (292)
T KOG0662|consen 85 Q 85 (292)
T ss_pred H
Confidence 5
|
|
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=98.79 E-value=3e-08 Score=96.66 Aligned_cols=83 Identities=28% Similarity=0.466 Sum_probs=73.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|++|.||+++. .+++.+|||.+..... ...+.+.+|+..+.+++|+||+++++++...+. .++|+||+++
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~lv~e~~~~ 83 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGE--ISIVLEYMDG 83 (264)
T ss_pred eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCe--EEEEEEecCC
Confidence 67899999999999998 4699999999876543 346789999999999999999999999988766 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 84 ~~L~~~l 90 (264)
T cd06623 84 GSLADLL 90 (264)
T ss_pred CcHHHHH
Confidence 9999876
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.2e-08 Score=101.29 Aligned_cols=82 Identities=26% Similarity=0.413 Sum_probs=65.4
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHH-HHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVK-KIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~-~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
+.||+|+||.||+++. .+++.+|+|.+.... ......+..|.. +++.++|+||+++++++...+. .++||||+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~--~~lv~e~~ 78 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK--LYFVLDYI 78 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCe--EEEEEeCC
Confidence 3699999999999997 578899999986432 122334455544 5678999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 79 ~~~~L~~~~ 87 (325)
T cd05602 79 NGGELFYHL 87 (325)
T ss_pred CCCcHHHHH
Confidence 999998775
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.2e-08 Score=97.59 Aligned_cols=83 Identities=23% Similarity=0.381 Sum_probs=73.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||++.. .++..+|+|.+........+.+.+|+.++++++||||+++++++...+. .+++|||++++
T Consensus 8 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~--~~l~~e~~~~~ 85 (262)
T cd06613 8 IQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDK--LWIVMEYCGGG 85 (262)
T ss_pred EEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCE--EEEEEeCCCCC
Confidence 67899999999999997 5678899999876554456789999999999999999999999987766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 86 ~l~~~~ 91 (262)
T cd06613 86 SLQDIY 91 (262)
T ss_pred cHHHHH
Confidence 998765
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.5e-08 Score=101.01 Aligned_cols=82 Identities=21% Similarity=0.394 Sum_probs=70.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh-----cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR-----HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~-----~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|.. .+|+.||||.+...... ....+..|+.++.+++|+||+++++++...+. .++|||
T Consensus 5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~--~~lv~e 82 (298)
T cd07841 5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSN--INLVFE 82 (298)
T ss_pred eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCE--EEEEEc
Confidence 56899999999999997 57899999999654322 24567889999999999999999999988666 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+ +|+|.+++
T Consensus 83 ~~-~~~L~~~i 92 (298)
T cd07841 83 FM-ETDLEKVI 92 (298)
T ss_pred cc-CCCHHHHH
Confidence 99 88998876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.1e-08 Score=99.76 Aligned_cols=82 Identities=22% Similarity=0.357 Sum_probs=72.2
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
..||+|+||.||++.. .+|..+|||.+..........+.+|+.+++.++|+||+++++++...+. .++||||+++|+
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~~~ 103 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGGA 103 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCE--EEEEEecCCCCc
Confidence 4699999999999987 6789999999865544456779999999999999999999999987776 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 104 L~~~~ 108 (292)
T cd06657 104 LTDIV 108 (292)
T ss_pred HHHHH
Confidence 98765
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=98.78 E-value=9.8e-09 Score=100.57 Aligned_cols=82 Identities=30% Similarity=0.458 Sum_probs=69.0
Q ss_pred CeeecCCceEEEEEEeCC-------CCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 471 EVLGRSSHGTLYKATLDS-------GHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~-------g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
+.||+|+||.||+|+..+ +..+|+|.+.... .....+|.+|+.+++.++||||++++++|...+. .++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEP--QYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCC--eEEEE
Confidence 369999999999998632 2578999886543 2345679999999999999999999999988777 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 79 e~~~~~~L~~~l 90 (269)
T cd05044 79 ELMEGGDLLSYL 90 (269)
T ss_pred eccCCCcHHHHH
Confidence 999999999876
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.5e-08 Score=96.84 Aligned_cols=83 Identities=22% Similarity=0.358 Sum_probs=71.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+++. .++..+|+|.++.. .....+.+.+|+.+++.++|+||+++.+++.+.+. .++++||+++
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~ 82 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGH--LYIVMEYCDG 82 (255)
T ss_pred EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCE--EEEEEeeCCC
Confidence 56899999999999997 57899999988543 23345678899999999999999999999988776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 83 ~~l~~~~ 89 (255)
T cd08219 83 GDLMQKI 89 (255)
T ss_pred CcHHHHH
Confidence 9998765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=98.78 E-value=3e-08 Score=98.10 Aligned_cols=85 Identities=21% Similarity=0.296 Sum_probs=70.7
Q ss_pred CCeeecCCceEEEEEEe-----CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-----DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||.+.+ .++..||+|.++... ....+.+.+|+.+++.++||||+++.+++...+....++|||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 88 (284)
T cd05079 9 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 88 (284)
T ss_pred ceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEE
Confidence 67899999999999984 357889999986543 233567999999999999999999999987653233899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 89 ~~~g~~L~~~l 99 (284)
T cd05079 89 FLPSGSLKEYL 99 (284)
T ss_pred ccCCCCHHHHH
Confidence 99999998875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.5e-08 Score=96.91 Aligned_cols=82 Identities=28% Similarity=0.453 Sum_probs=71.2
Q ss_pred CeeecCCceEEEEEEeC-C---CCEEEEEEeccCChh-cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATLD-S---GHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~-~---g~~vavK~l~~~~~~-~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
+.||+|+||.||+|+.. . +..+|+|.+...... ..+.+.+|+..+..++|+||+++++++..... .++|+||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~--~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEP--LYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCc--eEEEEEec
Confidence 46999999999999974 3 788999999765433 36789999999999999999999999988666 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 79 ~~~~L~~~l 87 (262)
T cd00192 79 EGGDLLDYL 87 (262)
T ss_pred cCCcHHHHH
Confidence 999999876
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.6e-08 Score=96.34 Aligned_cols=85 Identities=25% Similarity=0.451 Sum_probs=70.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC-----ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG-----LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~-----~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .+|..+|+|.+... ..+..+.+.+|+.++++++|+||+++++++.+......++++|
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVE 86 (264)
T ss_pred eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEE
Confidence 78999999999999997 57899999987432 1223467899999999999999999999987654334789999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 87 ~~~~~~L~~~~ 97 (264)
T cd06653 87 YMPGGSIKDQL 97 (264)
T ss_pred eCCCCcHHHHH
Confidence 99999998765
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.7e-08 Score=100.65 Aligned_cols=83 Identities=23% Similarity=0.326 Sum_probs=72.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
...||+|+||.||++.. .++..||+|.+........+.+.+|+.++..++||||+++++++...+. .++|+||+++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~--~~iv~e~~~~~ 103 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEE--LWVLMEFLQGG 103 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCe--EEEEEecCCCC
Confidence 34799999999999987 5789999999865444456778999999999999999999999987776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 104 ~L~~~~ 109 (297)
T cd06659 104 ALTDIV 109 (297)
T ss_pred CHHHHH
Confidence 998764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.6e-08 Score=96.66 Aligned_cols=83 Identities=28% Similarity=0.430 Sum_probs=72.0
Q ss_pred CCeeecCCceEEEEEEeC-C----CCEEEEEEeccCChh-cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATLD-S----GHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~----g~~vavK~l~~~~~~-~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+++.. . +..+|+|.+...... ..+.+..|+..+..++|+||+++++++...+. .+++||
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~~i~e 81 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEP--LMIVME 81 (258)
T ss_pred cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCe--eEEEEe
Confidence 578999999999999973 3 388999999765443 46789999999999999999999999988766 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 82 ~~~~~~l~~~~ 92 (258)
T smart00219 82 YMEGGDLLDYL 92 (258)
T ss_pred ccCCCCHHHHH
Confidence 99999998876
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.4e-08 Score=111.50 Aligned_cols=85 Identities=16% Similarity=0.307 Sum_probs=71.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
...||+|+||.||++.. ..+..+|+|.+... .......|..|+.++..++|||||++++++........|+||||++
T Consensus 18 l~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~ 97 (1021)
T PTZ00266 18 IKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCD 97 (1021)
T ss_pred EEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCC
Confidence 67899999999999997 56788999988643 2234567999999999999999999999886544334899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.++|
T Consensus 98 gGSL~~lL 105 (1021)
T PTZ00266 98 AGDLSRNI 105 (1021)
T ss_pred CCcHHHHH
Confidence 99998876
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.9e-08 Score=96.84 Aligned_cols=80 Identities=19% Similarity=0.282 Sum_probs=69.5
Q ss_pred eecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 473 LGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 473 lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
||+|+||.||+++. .+++.+|+|.+..... ...+.+.+|+.+++.++||||+++++++..... .++++||+++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~ 78 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKY--IYMLMEYCLGG 78 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCc--cEEEEecCCCC
Confidence 68999999999998 4589999999864322 235679999999999999999999999987777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 79 ~L~~~l 84 (262)
T cd05572 79 ELWTIL 84 (262)
T ss_pred cHHHHH
Confidence 999876
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.6e-08 Score=100.62 Aligned_cols=83 Identities=20% Similarity=0.303 Sum_probs=72.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
...||+|+||.||++.. .++..+|||.+........+.+.+|+..++.++|+||+++++++...+. .++||||+++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~--~~lv~e~~~~~ 104 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDE--LWVVMEFLEGG 104 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCe--EEEEEeCCCCC
Confidence 45799999999999987 5788999999876555556779999999999999999999999988777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 105 ~L~~~~ 110 (292)
T cd06658 105 ALTDIV 110 (292)
T ss_pred cHHHHH
Confidence 998875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=98.77 E-value=3e-08 Score=97.90 Aligned_cols=90 Identities=23% Similarity=0.287 Sum_probs=70.0
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEe-CCCC----EEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcC
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATL-DSGH----MLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP 533 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~-~~g~----~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~ 533 (555)
|..+|+.. .+.||+|+||.||+|.+ .+|. .+++|.+..... ...+++..|+..+++++||||+++++++..
T Consensus 4 ~~~~~~~~--~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~- 80 (279)
T cd05111 4 LKETELRK--LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG- 80 (279)
T ss_pred CCHhhcee--ccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-
Confidence 44445544 67899999999999997 4555 477787754322 234678888889999999999999998864
Q ss_pred CCceEEEEEeccCCCChhhhh
Q 048796 534 REQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 534 ~~~~~~lv~e~~~~GsL~~~l 554 (555)
.. .++++||+++|+|.+++
T Consensus 81 ~~--~~~i~e~~~~gsL~~~l 99 (279)
T cd05111 81 AS--LQLVTQLSPLGSLLDHV 99 (279)
T ss_pred Cc--cEEEEEeCCCCcHHHHH
Confidence 34 78999999999999886
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=98.77 E-value=3e-08 Score=99.40 Aligned_cols=83 Identities=18% Similarity=0.236 Sum_probs=70.0
Q ss_pred CCeeecCCceEEEEEEeC--------CCCEEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEE
Q 048796 470 AEVLGRSSHGTLYKATLD--------SGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~--------~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 539 (555)
.+.||+|+||.||++... ++..+|+|.+.... .....++.+|+.++..+ +|+||++++++|...+. .+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~--~~ 100 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP--LY 100 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc--eE
Confidence 789999999999999751 23579999987542 23456788999999999 79999999999988777 99
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+|+||+++|+|.+++
T Consensus 101 lv~e~~~~~~L~~~i 115 (307)
T cd05098 101 VIVEYASKGNLREYL 115 (307)
T ss_pred EEEecCCCCcHHHHH
Confidence 999999999999876
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.4e-08 Score=98.86 Aligned_cols=84 Identities=21% Similarity=0.350 Sum_probs=67.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcC---CCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGP---REQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~---~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+++. .+++.+|+|.+..... ...++.+|+.++.++ +||||++++++|... .....++||||
T Consensus 23 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 101 (286)
T cd06638 23 IETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLEL 101 (286)
T ss_pred eeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEee
Confidence 67899999999999987 5788999998754322 246788999999999 699999999988532 11238999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 102 ~~~~~L~~~l 111 (286)
T cd06638 102 CNGGSVTDLV 111 (286)
T ss_pred cCCCCHHHHH
Confidence 9999998765
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.3e-08 Score=101.11 Aligned_cols=83 Identities=18% Similarity=0.304 Sum_probs=67.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCC-cceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHP-NIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~-niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+. .+++.||||.+.... ....+.+..|+.++..++|+ +|+++++++...+. .|+||||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~--~~lv~E~ 82 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR--LYFVMEY 82 (324)
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCE--EEEEEcC
Confidence 56899999999999997 567899999986432 22346688899999999765 57788888877666 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 83 ~~~g~L~~~~ 92 (324)
T cd05587 83 VNGGDLMYHI 92 (324)
T ss_pred CCCCcHHHHH
Confidence 9999998765
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.76 E-value=9.7e-11 Score=121.65 Aligned_cols=57 Identities=28% Similarity=0.356 Sum_probs=27.3
Q ss_pred ccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCC
Q 048796 55 LEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLK 114 (555)
Q Consensus 55 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 114 (555)
|...+.+.|.+. ....++.-++.|+.|+|++|+++.. ..+..+++|++|||++|.+.
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~ 222 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR 222 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc
Confidence 444555555544 3334444444555555555555422 13444555555555555554
|
|
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.3e-08 Score=97.29 Aligned_cols=83 Identities=18% Similarity=0.270 Sum_probs=70.8
Q ss_pred CCeeecCCceEEEEEEeC------CCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|... .+..+|+|.+.... ......|.+|+.++..++|+||+++++++..... .++||
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~--~~~v~ 88 (277)
T cd05032 11 IRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP--TLVVM 88 (277)
T ss_pred EeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC--cEEEE
Confidence 678999999999999863 23689999986543 2345678999999999999999999999988777 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 89 e~~~~~~L~~~l 100 (277)
T cd05032 89 ELMAKGDLKSYL 100 (277)
T ss_pred ecCCCCCHHHHH
Confidence 999999999876
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.7e-08 Score=97.50 Aligned_cols=82 Identities=28% Similarity=0.440 Sum_probs=72.8
Q ss_pred CCeeecCCceEEEEEEeC-CCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATLD-SGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.+|+|+||.||+|... ++..+|+|.+..... ..+.+.+|+.+++.++|+|++++++++...+. .++++||++++
T Consensus 24 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~lv~e~~~~~ 100 (286)
T cd06614 24 LEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDE--LWVVMEYMDGG 100 (286)
T ss_pred hHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCE--EEEEEeccCCC
Confidence 678999999999999984 788999999976544 46778999999999999999999999988766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 101 ~L~~~l 106 (286)
T cd06614 101 SLTDII 106 (286)
T ss_pred cHHHHH
Confidence 999876
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.7e-08 Score=95.95 Aligned_cols=85 Identities=27% Similarity=0.446 Sum_probs=70.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||++.. .+|..+|+|.+... .....+.+..|+.++++++|+||+++++++........+++|||++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~ 84 (265)
T cd08217 5 LETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCE 84 (265)
T ss_pred eeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhcc
Confidence 56899999999999986 57889999998643 2334567889999999999999999999886544334899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 85 ~~~L~~~l 92 (265)
T cd08217 85 GGDLAQLI 92 (265)
T ss_pred CCCHHHHH
Confidence 99998775
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.4e-08 Score=96.09 Aligned_cols=81 Identities=27% Similarity=0.352 Sum_probs=67.8
Q ss_pred CeeecCCceEEEEEEe--CC--CCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL--DS--GHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~--~~--g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
+.||+|+||.||+|.+ .+ +..+|+|.+..... ...+++.+|+.+++.+.|+||+++++++.. +. .++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~--~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EP--LMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-Cc--eEEEEEeC
Confidence 3699999999999986 22 36899999875443 345789999999999999999999998764 44 89999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 78 ~~~~L~~~l 86 (257)
T cd05060 78 PLGPLLKYL 86 (257)
T ss_pred CCCcHHHHH
Confidence 999999876
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.3e-08 Score=97.34 Aligned_cols=83 Identities=20% Similarity=0.440 Sum_probs=71.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCC---CCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMR---HPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~---H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|.. .++..+|+|.+.... ....+++.+|+.++++++ |||++++++++..... .++||||
T Consensus 6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~--~~lv~e~ 83 (277)
T cd06917 6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPR--LWIIMEY 83 (277)
T ss_pred hhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCE--EEEEEec
Confidence 56899999999999997 678999999986542 233567889999999987 9999999999987666 8999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 84 ~~~~~L~~~~ 93 (277)
T cd06917 84 AEGGSVRTLM 93 (277)
T ss_pred CCCCcHHHHH
Confidence 9999998875
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.9e-08 Score=99.57 Aligned_cols=82 Identities=21% Similarity=0.306 Sum_probs=68.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .++..+|+|.++.... .....+.+|+.++++++||||+++++++...+. .++||||+++
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~ 88 (309)
T cd07872 11 LEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKS--LTLVFEYLDK 88 (309)
T ss_pred EEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCe--EEEEEeCCCC
Confidence 67899999999999987 4788999999865432 234568899999999999999999999987776 9999999986
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
+|.+++
T Consensus 89 -~l~~~~ 94 (309)
T cd07872 89 -DLKQYM 94 (309)
T ss_pred -CHHHHH
Confidence 777654
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.1e-08 Score=96.56 Aligned_cols=83 Identities=23% Similarity=0.323 Sum_probs=67.2
Q ss_pred CeeecCCceEEEEEEeC----CCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATLD----SGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
++||+|+||.||+|.+. +...+|+|++... .....+.+.+|+.+++.++||||++++++|...+. ..++++||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEG-SPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCC-CcEEEEecC
Confidence 46899999999999862 2457999998543 23345788999999999999999999998864332 278999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
.+|+|.+++
T Consensus 80 ~~~~L~~~~ 88 (262)
T cd05058 80 KHGDLRNFI 88 (262)
T ss_pred CCCCHHHHH
Confidence 999998876
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.6e-08 Score=98.32 Aligned_cols=83 Identities=25% Similarity=0.418 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||++.. .+|..+|+|.+.... ....+.+.+|+.+++.++|+||+++++++..... .++|+||++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~--~~lv~e~~~ 82 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGR--LFIVMEYCD 82 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCe--EEEEEecCC
Confidence 56899999999999997 568899999985432 2235678899999999999999999999987776 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+++|.+++
T Consensus 83 ~~~L~~~~ 90 (257)
T cd08225 83 GGDLMKRI 90 (257)
T ss_pred CCcHHHHH
Confidence 99998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.4e-08 Score=97.97 Aligned_cols=82 Identities=18% Similarity=0.229 Sum_probs=68.7
Q ss_pred CCeeecCCceEEEEEEeCC----CCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLDS----GHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~----g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|.+.+ ...+|||...... ....+.|.+|+.++++++||||+++++++.. +. .++|+||
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~--~~lv~e~ 87 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP--VWIVMEL 87 (270)
T ss_pred eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CC--cEEEEEc
Confidence 6799999999999998632 2468999886544 3446789999999999999999999998875 34 7899999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 88 ~~~~~L~~~l 97 (270)
T cd05056 88 APLGELRSYL 97 (270)
T ss_pred CCCCcHHHHH
Confidence 9999999876
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.5e-08 Score=98.53 Aligned_cols=82 Identities=21% Similarity=0.346 Sum_probs=71.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|.. .+|..+|||.+.... ....+.+.+|+.++++++||||+++++++..... .++|+||+
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~--~~~v~e~~- 81 (286)
T cd07832 5 LGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSG--FVLVMEYM- 81 (286)
T ss_pred EeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCe--eEEEeccc-
Confidence 56899999999999997 578999999986543 2335779999999999999999999999987766 99999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+++|.+++
T Consensus 82 ~~~L~~~~ 89 (286)
T cd07832 82 PSDLSEVL 89 (286)
T ss_pred CCCHHHHH
Confidence 99998875
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.7e-08 Score=99.18 Aligned_cols=83 Identities=22% Similarity=0.333 Sum_probs=69.3
Q ss_pred CCeeecCCceEEEEEEe-CCCC--EEEEEEeccC-ChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGH--MLTVKWLRVG-LVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~--~vavK~l~~~-~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|.. .++. .+|+|.++.. .....+.|.+|+.++.++ +||||+++++++...+. .++++||
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~--~~lv~e~ 84 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGY--LYIAIEY 84 (297)
T ss_pred eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCc--ceEEEEe
Confidence 67899999999999987 3443 4788888643 233456799999999999 79999999999987776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 85 ~~~~~L~~~l 94 (297)
T cd05089 85 APYGNLLDFL 94 (297)
T ss_pred cCCCcHHHHH
Confidence 9999998876
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.2e-08 Score=97.80 Aligned_cols=83 Identities=25% Similarity=0.317 Sum_probs=70.4
Q ss_pred CCeeecCCceEEEEEEeC------CCCEEEEEEeccCChh-cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~~-~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|... .+..||+|.+...... ..+.|.+|+.++..++||||+++++++...+. .++++
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~--~~~~~ 87 (283)
T cd05091 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP--LSMIF 87 (283)
T ss_pred HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc--eEEEE
Confidence 568999999999999862 2478999999754332 34678899999999999999999999988777 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++++|.+++
T Consensus 88 e~~~~~~l~~~l 99 (283)
T cd05091 88 SYCSHSDLHEFL 99 (283)
T ss_pred EcCCCCcHHHHH
Confidence 999999998875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.5e-08 Score=96.05 Aligned_cols=80 Identities=23% Similarity=0.284 Sum_probs=67.1
Q ss_pred eeecCCceEEEEEEe---CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 472 VLGRSSHGTLYKATL---DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 472 ~lG~G~~g~vy~~~~---~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.||+|+||.||+|.+ .++..+|+|.+.... ....++|.+|+.+++.++|+||+++++++.. +. .++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~--~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ES--WMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CC--cEEEEecCC
Confidence 589999999999975 467889999986432 2335789999999999999999999998864 34 799999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 79 ~~~L~~~l 86 (257)
T cd05116 79 LGPLNKFL 86 (257)
T ss_pred CCcHHHHH
Confidence 99998875
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.3e-08 Score=97.02 Aligned_cols=84 Identities=18% Similarity=0.363 Sum_probs=69.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCC----CceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPR----EQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~----~~~~~lv~e 543 (555)
.+.||+|+||.||+|.. .+++.+|+|.+.... .....+..|+.++.++ +|+||+++++++...+ ....+++||
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e 89 (272)
T cd06637 11 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 89 (272)
T ss_pred HHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEE
Confidence 67899999999999997 578899999986543 2356788999999998 7999999999986532 123799999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 90 ~~~~~~L~~~l 100 (272)
T cd06637 90 FCGAGSVTDLI 100 (272)
T ss_pred cCCCCcHHHHH
Confidence 99999998875
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=98.75 E-value=4e-08 Score=95.84 Aligned_cols=81 Identities=22% Similarity=0.378 Sum_probs=69.0
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
...||+|+||.||++....+..+|+|.+..... ..+.|.+|+.++++++|+|++++++++.. +. .+++|||+++|+
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~--~~~v~e~~~~~~ 86 (260)
T cd05069 11 DVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EP--IYIVTEFMGKGS 86 (260)
T ss_pred eeeecCcCCCeEEEEEEcCCceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CC--cEEEEEcCCCCC
Confidence 678999999999999986667899998865432 35678999999999999999999998753 44 799999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 87 L~~~~ 91 (260)
T cd05069 87 LLDFL 91 (260)
T ss_pred HHHHH
Confidence 98876
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.9e-08 Score=97.72 Aligned_cols=83 Identities=19% Similarity=0.273 Sum_probs=69.9
Q ss_pred CCeeecCCceEEEEEEeC------CCCEEEEEEeccC-ChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD------SGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||++... ....+|+|.+... ..+....+.+|+.++.++ +|+||++++++|...+. .+++
T Consensus 17 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~--~~li 94 (293)
T cd05053 17 GKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP--LYVV 94 (293)
T ss_pred eeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC--eEEE
Confidence 678999999999999862 2357999998653 223446789999999999 89999999999988777 9999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 95 ~e~~~~~~L~~~l 107 (293)
T cd05053 95 VEYAAHGNLRDFL 107 (293)
T ss_pred EEeCCCCcHHHHH
Confidence 9999999998876
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.1e-08 Score=99.61 Aligned_cols=83 Identities=20% Similarity=0.378 Sum_probs=71.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||++.. .++..+|+|.+.... ....+.+.+|+.++++++||||+++++++...+. .++|+||+
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~ 82 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEEN--MYLVVDLL 82 (258)
T ss_pred EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCe--EEEEEeCC
Confidence 56899999999999997 468999999986432 2345789999999999999999999999887776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++++|.+++
T Consensus 83 ~~~~L~~~l 91 (258)
T cd05578 83 LGGDLRYHL 91 (258)
T ss_pred CCCCHHHHH
Confidence 999998775
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.3e-08 Score=105.95 Aligned_cols=92 Identities=24% Similarity=0.413 Sum_probs=73.5
Q ss_pred ccCHHHHhcccCCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcC
Q 048796 459 AFTAEELSRAPAEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGP 533 (555)
Q Consensus 459 ~~~~~~l~~~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~ 533 (555)
.++++|+.. ..+||+|+||+|+.+++ .+++.+|||.+++... .+.+..+.|-+++.-. +||-++.|+.++.+.
T Consensus 364 ~~~l~~F~~--l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~ 441 (694)
T KOG0694|consen 364 PLTLDDFRL--LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTK 441 (694)
T ss_pred cccccceEE--EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccC
Confidence 344544444 77999999999999998 5788999999976543 2345667777776665 599999999999988
Q ss_pred CCceEEEEEeccCCCChhhhh
Q 048796 534 REQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 534 ~~~~~~lv~e~~~~GsL~~~l 554 (555)
++ +|.||||+.||++..+.
T Consensus 442 ~~--l~fvmey~~Ggdm~~~~ 460 (694)
T KOG0694|consen 442 EH--LFFVMEYVAGGDLMHHI 460 (694)
T ss_pred Ce--EEEEEEecCCCcEEEEE
Confidence 88 99999999999966544
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.4e-08 Score=96.82 Aligned_cols=84 Identities=21% Similarity=0.370 Sum_probs=69.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCc-ceeeeEEEEcCCC----ceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPN-IVPLRAYYWGPRE----QERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~n-iv~l~g~~~~~~~----~~~~lv 541 (555)
.+.||+|+||.||+|+. .+|+.||+|+++.... +......+|+.++.+++|+| ||.|.+++.+... ..+++|
T Consensus 16 ~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lv 95 (323)
T KOG0594|consen 16 VEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLV 95 (323)
T ss_pred HHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEE
Confidence 45699999999999996 6899999999975433 34566789999999999999 9999999987661 128999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
+||++. +|.+++
T Consensus 96 fe~~d~-DL~~ym 107 (323)
T KOG0594|consen 96 FEFLDR-DLKKYM 107 (323)
T ss_pred EEeecc-cHHHHH
Confidence 999987 676654
|
|
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=98.74 E-value=4e-08 Score=96.94 Aligned_cols=83 Identities=22% Similarity=0.296 Sum_probs=68.9
Q ss_pred CCeeecCCceEEEEEEe-CCCC----EEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGH----MLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~----~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.++||+|+||.||+|++ .+|. .||+|.+..... ...+++.+|+.++..++|+||++++++|... . .++++|
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~--~~l~~~ 88 (279)
T cd05109 12 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-T--VQLVTQ 88 (279)
T ss_pred eeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-C--cEEEEE
Confidence 67899999999999986 4554 489999865432 3457789999999999999999999998753 3 789999
Q ss_pred ccCCCChhhhhC
Q 048796 544 YIQGDSLALHLY 555 (555)
Q Consensus 544 ~~~~GsL~~~l~ 555 (555)
|+++|+|.++++
T Consensus 89 ~~~~g~l~~~l~ 100 (279)
T cd05109 89 LMPYGCLLDYVR 100 (279)
T ss_pred cCCCCCHHHHHh
Confidence 999999998763
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.4e-08 Score=95.65 Aligned_cols=83 Identities=24% Similarity=0.364 Sum_probs=72.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||.|+||.||+|.. .++..+|+|++.... ....+.+.+|+..++.++|+||+++++.+...+. .++|+||+++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~iv~e~~~~ 83 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDE--LWLVMPYLSG 83 (267)
T ss_pred eeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCE--EEEEEeccCC
Confidence 67899999999999997 578899999986433 2246789999999999999999999999887766 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 84 ~~l~~~~ 90 (267)
T cd06610 84 GSLLDIM 90 (267)
T ss_pred CcHHHHH
Confidence 9998875
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.3e-08 Score=100.72 Aligned_cols=83 Identities=19% Similarity=0.298 Sum_probs=70.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|.. .+++.+|+|++..... ...+.+.+|+.+++.++||||+++++++...+. .++|+||++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~ 83 (286)
T cd07846 6 LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKR--LYLVFEFVD 83 (286)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCe--EEEEEecCC
Confidence 57899999999999998 4689999998854322 235678899999999999999999999987776 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
++.|.++.
T Consensus 84 ~~~l~~~~ 91 (286)
T cd07846 84 HTVLDDLE 91 (286)
T ss_pred ccHHHHHH
Confidence 99887653
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.2e-08 Score=100.83 Aligned_cols=82 Identities=23% Similarity=0.443 Sum_probs=70.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
+++||+|.||+||-|.. ++|+.||||.+++... .....+++|+.++..++||-||.+.-.|++.+. .++|||-+.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~er--vFVVMEKl~ 646 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPER--VFVVMEKLH 646 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCce--EEEEehhhc
Confidence 78999999999999997 7899999999976432 335779999999999999999999999998887 999999885
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
| +..+.|
T Consensus 647 G-DMLEMI 653 (888)
T KOG4236|consen 647 G-DMLEMI 653 (888)
T ss_pred c-hHHHHH
Confidence 5 655543
|
|
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.7e-08 Score=97.33 Aligned_cols=83 Identities=22% Similarity=0.338 Sum_probs=70.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
...||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|+.+++.++|+||+++++++..... .++||||++
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~--~~~v~e~~~ 83 (286)
T cd07847 6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRK--LHLVFEYCD 83 (286)
T ss_pred eeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCE--EEEEEeccC
Confidence 56899999999999998 468999999885432 2234668899999999999999999999987776 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
++.|..++
T Consensus 84 ~~~l~~~~ 91 (286)
T cd07847 84 HTVLNELE 91 (286)
T ss_pred ccHHHHHH
Confidence 98887653
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=98.74 E-value=5.4e-08 Score=96.43 Aligned_cols=83 Identities=23% Similarity=0.348 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
...||+|++|.||++.. .+++.+++|.+........+.+.+|+.+++.++|+||+++++++...+. .++++||++++
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~--~~~v~e~~~~~ 101 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDE--LWVVMEFLEGG 101 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCe--EEEEEeccCCC
Confidence 46899999999999986 5788999999865544445678999999999999999999999987776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 102 ~L~~~~ 107 (285)
T cd06648 102 ALTDIV 107 (285)
T ss_pred CHHHHH
Confidence 998875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.8e-08 Score=98.40 Aligned_cols=83 Identities=18% Similarity=0.262 Sum_probs=69.9
Q ss_pred CCeeecCCceEEEEEEe--------CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEE
Q 048796 470 AEVLGRSSHGTLYKATL--------DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--------~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 539 (555)
...||+|+||.||+++. .++..+|+|.+.... ....+.+.+|+.++..+ +||||+++++++..... .+
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~--~~ 97 (304)
T cd05101 20 GKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP--LY 97 (304)
T ss_pred cceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCc--eE
Confidence 78999999999999974 134579999886432 23456789999999999 89999999999987776 99
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+||||+++|+|.+++
T Consensus 98 lv~e~~~~~~L~~~l 112 (304)
T cd05101 98 VIVEYASKGNLREYL 112 (304)
T ss_pred EEEecCCCCcHHHHH
Confidence 999999999998876
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.2e-08 Score=96.21 Aligned_cols=85 Identities=18% Similarity=0.391 Sum_probs=68.3
Q ss_pred CCeeecCCceEEEEEEeC-C---CCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEE
Q 048796 470 AEVLGRSSHGTLYKATLD-S---GHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~---g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~ 539 (555)
.+.||+|+||.||+|... + +..+|+|+++... ....+.+.+|+..++.++|+||+++++++...+. ...+
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 83 (273)
T cd05035 4 GKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPM 83 (273)
T ss_pred ccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccE
Confidence 678999999999999862 2 3679999986432 2335679999999999999999999998865332 1268
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+++||+++|+|.+++
T Consensus 84 ~v~e~~~~~~l~~~l 98 (273)
T cd05035 84 VILPFMKHGDLHSFL 98 (273)
T ss_pred EEEeccCCCCHHHHH
Confidence 999999999998765
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.8e-08 Score=98.28 Aligned_cols=82 Identities=22% Similarity=0.330 Sum_probs=68.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|.. .++..||+|.+..... .....+.+|+.++++++||||+++++++...+. .++|+||++
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~--~~lv~e~~~- 87 (301)
T cd07873 11 LDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKS--LTLVFEYLD- 87 (301)
T ss_pred eeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCe--EEEEEeccc-
Confidence 67899999999999987 4688999999864332 234567899999999999999999999987776 999999998
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 88 ~~l~~~l 94 (301)
T cd07873 88 KDLKQYL 94 (301)
T ss_pred cCHHHHH
Confidence 4887664
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=98.73 E-value=3e-08 Score=100.21 Aligned_cols=83 Identities=18% Similarity=0.308 Sum_probs=67.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
..+||+|+||.||+++. .+|+.||+|.+.... ....+.+..|..++..+. |++|+++.+++...+. .++||||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~--~~lv~Ey 82 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDR--LYFVMEY 82 (323)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCE--EEEEEcC
Confidence 57899999999999997 578999999986432 123456788888888886 5677788888887766 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 83 ~~~g~L~~~i 92 (323)
T cd05615 83 VNGGDLMYHI 92 (323)
T ss_pred CCCCcHHHHH
Confidence 9999998775
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.6e-08 Score=95.99 Aligned_cols=85 Identities=16% Similarity=0.331 Sum_probs=67.3
Q ss_pred CCeeecCCceEEEEEEeC-CCC--EEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC----CceEEE
Q 048796 470 AEVLGRSSHGTLYKATLD-SGH--MLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR----EQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g~--~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~----~~~~~l 540 (555)
++.||+|+||.||+|++. .+. .+|+|.++.. .....+.|..|+.+++.++|+||++++++|.... ....++
T Consensus 4 ~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 83 (272)
T cd05075 4 GKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVV 83 (272)
T ss_pred ccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEE
Confidence 678999999999999973 333 5899988653 2334577899999999999999999999885321 112689
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
++|||++|+|.+++
T Consensus 84 v~e~~~~~~l~~~~ 97 (272)
T cd05075 84 ILPFMKHGDLHSFL 97 (272)
T ss_pred EEEeCCCCcHHHHH
Confidence 99999999998764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.8e-08 Score=109.96 Aligned_cols=83 Identities=17% Similarity=0.274 Sum_probs=71.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+++.||||.++.... ...+.+..|+.++..++|+||+++++++...+. .++||||+
T Consensus 9 ~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~--~~lVmEy~ 86 (669)
T cd05610 9 VKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANN--VYLVMEYL 86 (669)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCE--EEEEEeCC
Confidence 67899999999999998 4789999999865322 234678899999999999999999998887776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 87 ~g~~L~~li 95 (669)
T cd05610 87 IGGDVKSLL 95 (669)
T ss_pred CCCCHHHHH
Confidence 999998876
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.7e-08 Score=95.61 Aligned_cols=83 Identities=18% Similarity=0.343 Sum_probs=71.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||++.. .++..+|||.+.... ....+.+.+|+.++++++||||+++++.+...+. .++|+||++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~--~~lv~e~~~ 82 (256)
T cd08220 5 IRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKA--LMIVMEYAP 82 (256)
T ss_pred EEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCE--EEEEEecCC
Confidence 56899999999999987 578899999986432 2335679999999999999999999998887666 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 83 ~~~L~~~~ 90 (256)
T cd08220 83 GGTLAEYI 90 (256)
T ss_pred CCCHHHHH
Confidence 99998876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=98.73 E-value=5e-08 Score=98.10 Aligned_cols=83 Identities=19% Similarity=0.287 Sum_probs=69.3
Q ss_pred CCeeecCCceEEEEEEe--------CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEE
Q 048796 470 AEVLGRSSHGTLYKATL--------DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--------~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 539 (555)
.+.||+|+||.||+++. .....+|+|.+.... ......+.+|+.++..+ +||||++++++|..... .+
T Consensus 17 ~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~--~~ 94 (314)
T cd05099 17 GKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGP--LY 94 (314)
T ss_pred eeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCc--eE
Confidence 78999999999999974 124578999886532 23356788999999999 69999999999987776 99
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+++||+++|+|.+++
T Consensus 95 lv~e~~~~g~L~~~i 109 (314)
T cd05099 95 VIVEYAAKGNLREFL 109 (314)
T ss_pred EEEecCCCCcHHHHH
Confidence 999999999998876
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.4e-08 Score=97.46 Aligned_cols=83 Identities=25% Similarity=0.361 Sum_probs=70.2
Q ss_pred CCeeecCCceEEEEEEeC-----------------CCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD-----------------SGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYW 531 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-----------------~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~ 531 (555)
.+.||+|+||.||+++.. .+..||+|.+.... ....+.|.+|+.++++++||||++++++|.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 89 (296)
T cd05051 10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCT 89 (296)
T ss_pred cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 788999999999998862 12458999986543 234678999999999999999999999998
Q ss_pred cCCCceEEEEEeccCCCChhhhh
Q 048796 532 GPREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 532 ~~~~~~~~lv~e~~~~GsL~~~l 554 (555)
..+. .++++||+++|+|.+++
T Consensus 90 ~~~~--~~lv~e~~~~~~L~~~l 110 (296)
T cd05051 90 VDPP--LCMIMEYMENGDLNQFL 110 (296)
T ss_pred cCCC--cEEEEecCCCCCHHHHH
Confidence 7776 99999999999998876
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.6e-08 Score=99.58 Aligned_cols=83 Identities=18% Similarity=0.322 Sum_probs=67.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+. .++..+|||.+..... ...+.+..|..++..+ +|++|+++++++...+. .++||||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~--~~lv~E~ 82 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDR--LYFVMEY 82 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCE--EEEEEcC
Confidence 56899999999999997 5678999999865321 2234567788887776 58999999999887776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 83 ~~~g~L~~~~ 92 (323)
T cd05616 83 VNGGDLMYQI 92 (323)
T ss_pred CCCCCHHHHH
Confidence 9999998765
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.1e-08 Score=96.86 Aligned_cols=84 Identities=19% Similarity=0.243 Sum_probs=70.1
Q ss_pred CCeeecCCceEEEEEEeCC-----CCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATLDS-----GHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~-----g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.++||+|+||.||+|.... +..|++|.+.... ....+.+.+|+.++++++|+||+++++++...+. ..++++|
T Consensus 11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~-~~~~~~~ 89 (280)
T cd05043 11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE-PPFVLYP 89 (280)
T ss_pred eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC-CCEEEEE
Confidence 6799999999999999744 6789999886543 2335778999999999999999999999876432 3899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 90 ~~~~~~L~~~l 100 (280)
T cd05043 90 YMNWGNLKLFL 100 (280)
T ss_pred cCCCCcHHHHH
Confidence 99999998876
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.8e-08 Score=101.81 Aligned_cols=84 Identities=17% Similarity=0.327 Sum_probs=70.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+++|+|+||.++..+. .++..+++|.+..... ..++...+|+.++++++|||||.+.+.+..++. -++|||+|++
T Consensus 9 ~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~-~l~Ivm~Y~e 87 (426)
T KOG0589|consen 9 LRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQ-LLCIVMEYCE 87 (426)
T ss_pred hhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCc-eEEEEEeecC
Confidence 67899999999998886 5788999999865432 335578999999999999999999999876553 3899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
||++.+.|
T Consensus 88 Gg~l~~~i 95 (426)
T KOG0589|consen 88 GGDLAQLI 95 (426)
T ss_pred CCCHHHHH
Confidence 99999875
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=98.72 E-value=3e-08 Score=96.40 Aligned_cols=83 Identities=29% Similarity=0.472 Sum_probs=70.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhc--HHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRH--KKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~--~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||++.. .+++.+|+|.+....... .....+|+..+.+++||||+++++++..... .++||||++
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~--~~~v~~~~~ 81 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNY--LYIVMEYCP 81 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSE--EEEEEEEET
T ss_pred eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccc--ccccccccc
Confidence 46899999999999998 467789999997654432 2344669999999999999999999987666 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.++|
T Consensus 82 ~~~L~~~l 89 (260)
T PF00069_consen 82 GGSLQDYL 89 (260)
T ss_dssp TEBHHHHH
T ss_pred cccccccc
Confidence 99998876
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.9e-08 Score=98.78 Aligned_cols=78 Identities=19% Similarity=0.226 Sum_probs=61.6
Q ss_pred CCeeecCCceEEEEEEeC--CCCEEEEEEeccC-----ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD--SGHMLTVKWLRVG-----LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~--~g~~vavK~l~~~-----~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.++||+|+||+||+|+.. +++.+|||++... .....+.|.+|+.++.+++|+|+++.+..+ +. .++||
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---~~--~~LVm 97 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---GK--DGLVR 97 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---CC--cEEEE
Confidence 789999999999999873 6778899987532 112356799999999999999999633221 34 79999
Q ss_pred eccCCCChhh
Q 048796 543 DYIQGDSLAL 552 (555)
Q Consensus 543 e~~~~GsL~~ 552 (555)
||+++++|..
T Consensus 98 E~~~G~~L~~ 107 (365)
T PRK09188 98 GWTEGVPLHL 107 (365)
T ss_pred EccCCCCHHH
Confidence 9999999863
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.1e-08 Score=99.74 Aligned_cols=84 Identities=21% Similarity=0.396 Sum_probs=67.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC---ceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE---QERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~---~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .+|..||||++... .......+.+|+.+++.++||||+++++++..... ...++|||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e 84 (338)
T cd07859 5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFE 84 (338)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEe
Confidence 56899999999999997 57899999998643 22234578899999999999999999998864321 23799999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
||+ |+|.+++
T Consensus 85 ~~~-~~L~~~l 94 (338)
T cd07859 85 LME-SDLHQVI 94 (338)
T ss_pred cCC-CCHHHHH
Confidence 996 5887765
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.3e-08 Score=96.26 Aligned_cols=82 Identities=22% Similarity=0.376 Sum_probs=69.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|++|.||+|+. .++..||||.+.... ....+.+.+|+.++.+++||||+++++++..++. .++|+||++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~~v~e~~~ 82 (285)
T cd07861 5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESR--LYLIFEFLS 82 (285)
T ss_pred eeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCe--EEEEEecCC
Confidence 56899999999999997 578999999986432 2234678899999999999999999999987776 999999998
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
|+|.+++
T Consensus 83 -~~l~~~~ 89 (285)
T cd07861 83 -MDLKKYL 89 (285)
T ss_pred -CCHHHHH
Confidence 5787664
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.9e-08 Score=96.44 Aligned_cols=82 Identities=21% Similarity=0.361 Sum_probs=69.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh-cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|++|.||+|+. .+|..||||.+...... ..+.+.+|+.+++.++|+||+++++++...+. .++||||+++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~ 82 (284)
T cd07836 5 LEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENK--LMLVFEYMDK 82 (284)
T ss_pred eeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCc--EEEEEecCCc
Confidence 57899999999999998 57899999998654332 34667889999999999999999999998777 9999999985
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
+|.+++
T Consensus 83 -~l~~~~ 88 (284)
T cd07836 83 -DLKKYM 88 (284)
T ss_pred -cHHHHH
Confidence 777654
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.4e-08 Score=97.22 Aligned_cols=82 Identities=22% Similarity=0.331 Sum_probs=69.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|++|.||+|.. .+++.||+|.+..... .....+.+|+.+++.++|+||+++++++...+. .++||||+++
T Consensus 10 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~ 87 (291)
T cd07844 10 LDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKT--LTLVFEYLDT 87 (291)
T ss_pred EEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCe--EEEEEecCCC
Confidence 67899999999999997 4789999999864332 123557789999999999999999999987776 9999999985
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
+|.+++
T Consensus 88 -~L~~~~ 93 (291)
T cd07844 88 -DLKQYM 93 (291)
T ss_pred -CHHHHH
Confidence 888765
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=98.71 E-value=6.9e-08 Score=93.87 Aligned_cols=80 Identities=20% Similarity=0.348 Sum_probs=68.2
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEc-CCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWG-PREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~-~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||++.. .|..+|+|.+.... ..+.|.+|+.++++++|+|++++++++.. ... .++++||+++|
T Consensus 11 ~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~--~~lv~e~~~~~ 85 (256)
T cd05082 11 LQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG--LYIVTEYMAKG 85 (256)
T ss_pred eeeecccCCCeEEEEEE-cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCc--eEEEEECCCCC
Confidence 67899999999999987 57889999886432 34679999999999999999999998654 344 89999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 86 ~L~~~~ 91 (256)
T cd05082 86 SLVDYL 91 (256)
T ss_pred cHHHHH
Confidence 998875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.1e-08 Score=106.23 Aligned_cols=83 Identities=24% Similarity=0.267 Sum_probs=73.6
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
-+||+|.||+||.|+. .+...+|||-+.....+..+-...||.+-+.++|.|||+++|.|...+. .-+.||-++||+
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf--~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGF--FKIFMEQVPGGS 658 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCe--EEEEeecCCCCc
Confidence 3899999999999997 5567799999987766667778899999999999999999999988777 889999999999
Q ss_pred hhhhhC
Q 048796 550 LALHLY 555 (555)
Q Consensus 550 L~~~l~ 555 (555)
|.++|+
T Consensus 659 LSsLLr 664 (1226)
T KOG4279|consen 659 LSSLLR 664 (1226)
T ss_pred HHHHHH
Confidence 998873
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.8e-08 Score=93.05 Aligned_cols=83 Identities=20% Similarity=0.438 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|++|.||+++. .+++.+|+|.+..... ...+.+.+|+.++++++|+|++++++++..... .++++||++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~~v~e~~~ 82 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDS--LYIILEYAE 82 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCE--EEEEEecCC
Confidence 67899999999999987 4688999999965443 345789999999999999999999999987766 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+++|.+++
T Consensus 83 ~~~L~~~~ 90 (254)
T cd06627 83 NGSLRQII 90 (254)
T ss_pred CCcHHHHH
Confidence 99998865
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.3e-08 Score=99.41 Aligned_cols=83 Identities=22% Similarity=0.384 Sum_probs=69.0
Q ss_pred CCeeecCCceEEEEEEe----CCCCEEEEEEeccCC----hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEE
Q 048796 470 AEVLGRSSHGTLYKATL----DSGHMLTVKWLRVGL----VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~----~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~l 540 (555)
.+.||+|+||.||+++. .+++.||+|.+.... ....+.+..|+.++..+ +|++|+++++++...+. .++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~--~~l 82 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAK--LHL 82 (332)
T ss_pred EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCE--EEE
Confidence 56899999999999875 368899999986422 12345688899999999 59999999998887766 999
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
||||+++|+|.+++
T Consensus 83 v~e~~~~g~L~~~l 96 (332)
T cd05614 83 ILDYVSGGEMFTHL 96 (332)
T ss_pred EEeCCCCCcHHHHH
Confidence 99999999998876
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.1e-08 Score=95.87 Aligned_cols=83 Identities=22% Similarity=0.379 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||++.. .+++.+|+|.+.... ....+++.+|+.++++++||||+++++++..... .++++||+++
T Consensus 6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~--~~lv~e~~~~ 83 (265)
T cd06605 6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGD--ISICMEYMDG 83 (265)
T ss_pred HHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCE--EEEEEEecCC
Confidence 56899999999999998 478999999986543 2345778999999999999999999999988766 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
++|.+++
T Consensus 84 ~~L~~~~ 90 (265)
T cd06605 84 GSLDKIL 90 (265)
T ss_pred CcHHHHH
Confidence 9998876
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.6e-08 Score=98.41 Aligned_cols=83 Identities=23% Similarity=0.360 Sum_probs=71.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|.. .++..+|+|.+..... ...+.+..|+.++..++|+||+++++++..... .++||||+
T Consensus 6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~lv~e~~ 83 (316)
T cd05574 6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETY--LCLVMDYC 83 (316)
T ss_pred eeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCE--EEEEEEec
Confidence 56899999999999997 4689999999865432 235678999999999999999999999987766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~~~~L~~~~ 92 (316)
T cd05574 84 PGGELFRLL 92 (316)
T ss_pred CCCCHHHHH
Confidence 999998875
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.6e-08 Score=100.89 Aligned_cols=84 Identities=17% Similarity=0.243 Sum_probs=68.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC---ceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE---QERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~---~~~~lv~e 543 (555)
.+.||+|+||.||+++. .+|+.||||++... .....+.+.+|+.+++.++|+||+++++++...+. ...++|+|
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 84 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTE 84 (372)
T ss_pred cceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEee
Confidence 67899999999999997 57999999998643 22335678899999999999999999999876550 13899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+.+ +|.+++
T Consensus 85 ~~~~-~l~~~~ 94 (372)
T cd07853 85 LMQS-DLHKII 94 (372)
T ss_pred cccc-CHHHHH
Confidence 9974 676654
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.5e-08 Score=100.28 Aligned_cols=84 Identities=25% Similarity=0.344 Sum_probs=68.4
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.++||+|+||.||+|+. .+++.||+|+++.... ...+.+..|+.++.++ +|+||++++++|...+. ..+++
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~-~~~~v 90 (337)
T cd05054 12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG-PLMVI 90 (337)
T ss_pred hcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC-CEEEE
Confidence 78999999999999974 2357899999865332 2345688899999999 89999999998875432 38899
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
+||+++|+|.++|
T Consensus 91 ~ey~~~~~L~~~i 103 (337)
T cd05054 91 VEYCKFGNLSNYL 103 (337)
T ss_pred EecCCCCCHHHHH
Confidence 9999999999876
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=98.69 E-value=6.9e-08 Score=96.75 Aligned_cols=81 Identities=22% Similarity=0.369 Sum_probs=67.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||+|.+..... ...+++.+|+.+++.++||||+++.++|...+. .++|+||+
T Consensus 20 ~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~~ 97 (307)
T cd06607 20 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHT--AWLVMEYC 97 (307)
T ss_pred heeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCe--EEEEHHhh
Confidence 67899999999999997 5789999998854322 234678999999999999999999999998776 99999999
Q ss_pred CCCChhhh
Q 048796 546 QGDSLALH 553 (555)
Q Consensus 546 ~~GsL~~~ 553 (555)
++ ++.++
T Consensus 98 ~g-~l~~~ 104 (307)
T cd06607 98 LG-SASDI 104 (307)
T ss_pred CC-CHHHH
Confidence 84 66554
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.1e-08 Score=96.54 Aligned_cols=80 Identities=19% Similarity=0.382 Sum_probs=68.9
Q ss_pred eecCCceEEEEEEeC-CCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 473 LGRSSHGTLYKATLD-SGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 473 lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
||+|+||.||+++.. +|+.+|+|.+..... ...+.+.+|+.++.+++|+||+++++.+..... .++++||+++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~--~~lv~e~~~~~ 78 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKN--LYLVMEYLPGG 78 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcE--EEEEEecCCCC
Confidence 689999999999984 599999999865432 345678999999999999999999999887666 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 79 ~L~~~l 84 (265)
T cd05579 79 DLASLL 84 (265)
T ss_pred cHHHHH
Confidence 998765
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=98.69 E-value=7.5e-08 Score=94.31 Aligned_cols=83 Identities=28% Similarity=0.432 Sum_probs=67.7
Q ss_pred CCeeecCCceEEEEEEeC--CCCEEEEEEeccCC----------hhcHHHHHHHHHHHHc-CCCCcceeeeEEEEcCCCc
Q 048796 470 AEVLGRSSHGTLYKATLD--SGHMLTVKWLRVGL----------VRHKKEFAKEVKKIGS-MRHPNIVPLRAYYWGPREQ 536 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~--~g~~vavK~l~~~~----------~~~~~~~~~ei~~l~~-l~H~niv~l~g~~~~~~~~ 536 (555)
.+.||+|+||.||+|... .+..+|+|.+.... .....++..|+.++.+ ++||||+++++++...+.
T Consensus 5 ~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~- 83 (269)
T cd08528 5 LEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDR- 83 (269)
T ss_pred hhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCe-
Confidence 568999999999999984 46889999874321 1223567888888865 799999999999988776
Q ss_pred eEEEEEeccCCCChhhhh
Q 048796 537 ERLLLADYIQGDSLALHL 554 (555)
Q Consensus 537 ~~~lv~e~~~~GsL~~~l 554 (555)
.+++|||+++++|.+++
T Consensus 84 -~~lv~e~~~~~~l~~~l 100 (269)
T cd08528 84 -LYIVMDLIEGAPLGEHF 100 (269)
T ss_pred -EEEEEecCCCCcHHHHH
Confidence 99999999999998765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=98.69 E-value=1e-07 Score=91.87 Aligned_cols=83 Identities=25% Similarity=0.458 Sum_probs=73.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|++|.||++.. .++..+++|++........+.+.+|+..++.++|+|++++++++..... .++++||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~l~~e~~~~~ 82 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDE--LWIVMEFCSGG 82 (253)
T ss_pred eeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCe--EEEEEecCCCC
Confidence 57899999999999998 4789999999976654456789999999999999999999999987766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 83 ~L~~~~ 88 (253)
T cd05122 83 SLKDLL 88 (253)
T ss_pred cHHHHH
Confidence 998875
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.5e-08 Score=93.91 Aligned_cols=79 Identities=18% Similarity=0.371 Sum_probs=68.2
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|.. .+..+|+|.++... ..+.|.+|+.++++++|||++++++++.. +. .+++|||+++|+
T Consensus 11 ~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~--~~~v~e~~~~~~ 84 (254)
T cd05083 11 GEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH-NG--LYIVMELMSKGN 84 (254)
T ss_pred eeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CC--cEEEEECCCCCC
Confidence 78999999999999986 67889999986532 24678999999999999999999998864 34 799999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 85 L~~~l 89 (254)
T cd05083 85 LVNFL 89 (254)
T ss_pred HHHHH
Confidence 98876
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=98.68 E-value=7.4e-08 Score=95.64 Aligned_cols=82 Identities=22% Similarity=0.302 Sum_probs=68.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|.. .+|..+|+|.+..... .....+.+|+.+++.++|+||+++.+++...+. .++|+||+.
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~--~~lv~e~~~- 86 (291)
T cd07870 10 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKET--LTFVFEYMH- 86 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCe--EEEEEeccc-
Confidence 67899999999999987 5789999999865432 224567899999999999999999999987766 999999996
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
+++.+++
T Consensus 87 ~~l~~~~ 93 (291)
T cd07870 87 TDLAQYM 93 (291)
T ss_pred CCHHHHH
Confidence 5776543
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=98.67 E-value=1e-07 Score=92.31 Aligned_cols=83 Identities=28% Similarity=0.467 Sum_probs=72.2
Q ss_pred CCeeecCCceEEEEEEeC-CCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcC--CCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD-SGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP--REQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~--~~~~~~lv~e~ 544 (555)
.+.||+|++|.||+|... ++..+++|.+..... ...+.+.+|+..+++++|+||+++++.+... .. .++++||
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~--~~lv~e~ 82 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNT--LNIFLEY 82 (260)
T ss_pred eeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCe--EEEEEEe
Confidence 578999999999999984 789999999865432 3467899999999999999999999999876 55 8999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++++|.+++
T Consensus 83 ~~~~~L~~~~ 92 (260)
T cd06606 83 VSGGSLSSLL 92 (260)
T ss_pred cCCCcHHHHH
Confidence 9999998875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=98.67 E-value=7.6e-08 Score=97.70 Aligned_cols=83 Identities=19% Similarity=0.237 Sum_probs=69.4
Q ss_pred CCeeecCCceEEEEEEeC--------CCCEEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEE
Q 048796 470 AEVLGRSSHGTLYKATLD--------SGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~--------~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 539 (555)
.+.||+|+||.||+++.. ....+|+|.+.... ....+++.+|+.++.++ +||||++++++|...+. .+
T Consensus 17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~--~~ 94 (334)
T cd05100 17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP--LY 94 (334)
T ss_pred cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc--eE
Confidence 779999999999999741 12368999886533 23357899999999999 89999999999987776 99
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+++||+++|+|.+++
T Consensus 95 lv~e~~~~g~L~~~l 109 (334)
T cd05100 95 VLVEYASKGNLREYL 109 (334)
T ss_pred EEEecCCCCcHHHHH
Confidence 999999999998876
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.5e-08 Score=104.23 Aligned_cols=86 Identities=12% Similarity=0.167 Sum_probs=62.0
Q ss_pred CCeeecCCceEEEEEEe-----------------CCCCEEEEEEeccCChhcHHH--------------HHHHHHHHHcC
Q 048796 470 AEVLGRSSHGTLYKATL-----------------DSGHMLTVKWLRVGLVRHKKE--------------FAKEVKKIGSM 518 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-----------------~~g~~vavK~l~~~~~~~~~~--------------~~~ei~~l~~l 518 (555)
.++||+|+||.||+|.+ ..++.||||++........++ +..|+..+.++
T Consensus 150 ~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l 229 (507)
T PLN03224 150 RDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKI 229 (507)
T ss_pred eeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHh
Confidence 78999999999999964 235679999986543322333 34467777777
Q ss_pred CCCcc-----eeeeEEEEcC------CCceEEEEEeccCCCChhhhhC
Q 048796 519 RHPNI-----VPLRAYYWGP------REQERLLLADYIQGDSLALHLY 555 (555)
Q Consensus 519 ~H~ni-----v~l~g~~~~~------~~~~~~lv~e~~~~GsL~~~l~ 555 (555)
+|.++ +++++||... ...+.++||||+++|+|.++||
T Consensus 230 ~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~ 277 (507)
T PLN03224 230 KRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALD 277 (507)
T ss_pred hcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHh
Confidence 77655 6777877532 1123899999999999999874
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=5.6e-08 Score=103.86 Aligned_cols=85 Identities=21% Similarity=0.215 Sum_probs=69.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCc------eEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ------ERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~------~~~l 540 (555)
.++||+|+||.||+++. .+|+.||||.+... .......+.+|+..+..++|+||+++...+...+.. ..++
T Consensus 37 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~l 116 (496)
T PTZ00283 37 SRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIAL 116 (496)
T ss_pred EEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEE
Confidence 77999999999999986 67999999998653 233456788999999999999999988776533210 2679
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
||||+++|+|.++|
T Consensus 117 V~Ey~~~gsL~~~l 130 (496)
T PTZ00283 117 VLDYANAGDLRQEI 130 (496)
T ss_pred EEeCCCCCcHHHHH
Confidence 99999999998876
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.66 E-value=3e-08 Score=96.03 Aligned_cols=84 Identities=20% Similarity=0.284 Sum_probs=70.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEecc--CChhcHHHHHHHHHHHHcCCCCcceeeeEEEEc---CCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRV--GLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWG---PREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~--~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~---~~~~~~~lv~e 543 (555)
.+.||+|+||.|+++.. .+|..||||++.. ......+.-.+|+++++.++|+||+.+...+.. .+..++|+|+|
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~e 106 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFE 106 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehh
Confidence 46799999999999997 6899999999963 344456778999999999999999999998865 23446999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
+|+- +|++.|
T Consensus 107 lMet-DL~~ii 116 (359)
T KOG0660|consen 107 LMET-DLHQII 116 (359)
T ss_pred HHhh-HHHHHH
Confidence 9965 777765
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=98.66 E-value=7.4e-08 Score=96.32 Aligned_cols=89 Identities=28% Similarity=0.408 Sum_probs=70.0
Q ss_pred CHHHHhcccCCeeecCCceEEEEEEe-CCCC----EEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC
Q 048796 461 TAEELSRAPAEVLGRSSHGTLYKATL-DSGH----MLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR 534 (555)
Q Consensus 461 ~~~~l~~~~~~~lG~G~~g~vy~~~~-~~g~----~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~ 534 (555)
..+|+.. .+.||+|+||.||+|++ .+|. .+|+|.+..... ....++.+|+.+++.++||||++++++|...
T Consensus 5 ~~~~~~~--~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~- 81 (303)
T cd05110 5 KETELKR--VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP- 81 (303)
T ss_pred chhhcee--ccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-
Confidence 3444443 67899999999999986 4454 478888865432 2345789999999999999999999998753
Q ss_pred CceEEEEEeccCCCChhhhh
Q 048796 535 EQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 535 ~~~~~lv~e~~~~GsL~~~l 554 (555)
. .++++||+++|+|.+++
T Consensus 82 ~--~~~v~e~~~~g~l~~~~ 99 (303)
T cd05110 82 T--IQLVTQLMPHGCLLDYV 99 (303)
T ss_pred C--ceeeehhcCCCCHHHHH
Confidence 3 67999999999998875
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=98.66 E-value=5e-08 Score=96.43 Aligned_cols=82 Identities=22% Similarity=0.382 Sum_probs=68.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|..+|||.+.... ....+.+.+|+.++++++||||+++++++...+. .++||||+.
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~~v~e~~~ 82 (284)
T cd07860 5 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLH 82 (284)
T ss_pred eeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCc--EEEEeeccc
Confidence 56899999999999997 578999999886432 2234678999999999999999999999987777 999999996
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
++|.+++
T Consensus 83 -~~l~~~~ 89 (284)
T cd07860 83 -QDLKKFM 89 (284)
T ss_pred -cCHHHHH
Confidence 5777654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.66 E-value=8.5e-10 Score=100.82 Aligned_cols=81 Identities=21% Similarity=0.318 Sum_probs=70.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.++||+|.|+.||++.. ++|+.+|+|.+... ...+.++..+|+++-+.++|||||+|...+.+... .|+|+|+|+
T Consensus 16 ~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~--~ylvFe~m~ 93 (355)
T KOG0033|consen 16 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESF--HYLVFDLVT 93 (355)
T ss_pred HHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccce--eEEEEeccc
Confidence 56899999999999986 78999999988543 22356889999999999999999999998887777 999999999
Q ss_pred CCChhh
Q 048796 547 GDSLAL 552 (555)
Q Consensus 547 ~GsL~~ 552 (555)
||+|..
T Consensus 94 G~dl~~ 99 (355)
T KOG0033|consen 94 GGELFE 99 (355)
T ss_pred chHHHH
Confidence 999864
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.2e-07 Score=95.43 Aligned_cols=82 Identities=21% Similarity=0.344 Sum_probs=65.5
Q ss_pred CCeeecCCceEEEEEEeC---CCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATLD---SGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
+..||+|+||.||+|+.. +++.+|+|.+.... ....+.+|+.++++++||||+++++++........++++||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 568999999999999863 56789999986432 2356789999999999999999999886544334899999997
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+ +|.+++
T Consensus 84 ~-~l~~~~ 90 (317)
T cd07868 84 H-DLWHII 90 (317)
T ss_pred C-CHHHHH
Confidence 5 676553
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.1e-07 Score=94.44 Aligned_cols=84 Identities=24% Similarity=0.394 Sum_probs=68.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCC---ceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPRE---QERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~---~~~~lv~e~ 544 (555)
.+.||+|+||.||++.. .+++.+|+|.+..... ..+.+.+|+.++.++ +|||++++++++...+. ...++|+||
T Consensus 27 ~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey 105 (291)
T cd06639 27 IETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLEL 105 (291)
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEE
Confidence 56899999999999997 5788999999864322 246678899999998 89999999999875431 238999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 106 ~~~~sL~~~~ 115 (291)
T cd06639 106 CNGGSVTELV 115 (291)
T ss_pred CCCCcHHHHH
Confidence 9999998765
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=98.65 E-value=7.7e-08 Score=94.95 Aligned_cols=82 Identities=20% Similarity=0.313 Sum_probs=65.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHH-HHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKK-IGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~-l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+++. .+|..||+|++..... ....++..|+.. ++..+||||+++++++...+. .++++||++
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~--~~lv~e~~~ 83 (283)
T cd06617 6 IEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGD--VWICMEVMD 83 (283)
T ss_pred EEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCc--EEEEhhhhc
Confidence 56899999999999997 5799999999865422 234456667665 667799999999999987776 999999997
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
|+|.+++
T Consensus 84 -~~l~~~l 90 (283)
T cd06617 84 -TSLDKFY 90 (283)
T ss_pred -ccHHHHH
Confidence 5776554
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.4e-07 Score=94.92 Aligned_cols=81 Identities=21% Similarity=0.339 Sum_probs=64.7
Q ss_pred CCeeecCCceEEEEEEeC---CCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATLD---SGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
+..||+|+||.||+|+.. ++..||+|.+.... ....+.+|+.++++++||||+++++++........++|+||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 568999999999999963 45789999886532 2356789999999999999999999986543334899999998
Q ss_pred CCChhhh
Q 048796 547 GDSLALH 553 (555)
Q Consensus 547 ~GsL~~~ 553 (555)
+ +|.++
T Consensus 84 ~-~l~~~ 89 (317)
T cd07867 84 H-DLWHI 89 (317)
T ss_pred C-cHHHH
Confidence 6 56554
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.3e-07 Score=95.17 Aligned_cols=82 Identities=23% Similarity=0.368 Sum_probs=68.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+|..+|+|.+..... ...+.+.+|+.++++++|+|++++++++..... .++||||+
T Consensus 30 ~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~ 107 (317)
T cd06635 30 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHT--AWLVMEYC 107 (317)
T ss_pred hheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCe--EEEEEeCC
Confidence 67899999999999997 5788999999864322 234578899999999999999999999987776 89999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++ +|.+++
T Consensus 108 ~g-~l~~~~ 115 (317)
T cd06635 108 LG-SASDLL 115 (317)
T ss_pred CC-CHHHHH
Confidence 74 776654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.8e-09 Score=109.17 Aligned_cols=84 Identities=25% Similarity=0.337 Sum_probs=74.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
-..+|+|+||.|||++. ..+...|||.++.....+-+-.+.|+-+++.++|||||.++|.|...+. +|+.||||.+|
T Consensus 20 lqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dk--lwicMEycggg 97 (829)
T KOG0576|consen 20 LQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDK--LWICMEYCGGG 97 (829)
T ss_pred eeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcC--cEEEEEecCCC
Confidence 56899999999999997 6789999999987655556677889999999999999999999987777 99999999999
Q ss_pred ChhhhhC
Q 048796 549 SLALHLY 555 (555)
Q Consensus 549 sL~~~l~ 555 (555)
+|.+.-|
T Consensus 98 slQdiy~ 104 (829)
T KOG0576|consen 98 SLQDIYH 104 (829)
T ss_pred cccceee
Confidence 9988643
|
|
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.63 E-value=9.9e-08 Score=96.67 Aligned_cols=80 Identities=23% Similarity=0.382 Sum_probs=64.0
Q ss_pred eecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcC---CCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 473 LGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSM---RHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 473 lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l---~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
||+|+||.||+|+. .+|+.||||.+..... .....+..|..++... +||||++++.++...+. .++||||+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~--~~lv~e~~ 78 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSD--LYLVTDYM 78 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCe--EEEEEcCC
Confidence 69999999999997 5789999999854221 1233455666666655 69999999999988777 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 79 ~~g~L~~~l 87 (330)
T cd05586 79 SGGELFWHL 87 (330)
T ss_pred CCChHHHHH
Confidence 999998765
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.2e-07 Score=96.07 Aligned_cols=81 Identities=22% Similarity=0.273 Sum_probs=68.6
Q ss_pred eeecC--CceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 472 VLGRS--SHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 472 ~lG~G--~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.||+| +||+||+++. .+|+.||+|.+.... ....+.+.+|+.+++.++||||+++++++...+. .++|+||++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~--~~~v~e~~~ 82 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSW--LWVISPFMA 82 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCc--eEEEEeccc
Confidence 46666 9999999997 589999999986432 2234678899999999999999999999998777 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 83 ~~~l~~~l 90 (328)
T cd08226 83 YGSANSLL 90 (328)
T ss_pred CCCHHHHH
Confidence 99998875
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.3e-07 Score=91.50 Aligned_cols=83 Identities=19% Similarity=0.423 Sum_probs=72.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||++.. .++..+|+|++..... ...+.+.+|+.+++.++|+|++++.+.+...+. .++|+||++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~--~~lv~e~~~ 82 (258)
T cd08215 5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGK--LCIVMEYAD 82 (258)
T ss_pred EeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCE--EEEEEEecC
Confidence 56899999999999998 4689999999965432 456778999999999999999999999887766 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+++|.+++
T Consensus 83 ~~~L~~~l 90 (258)
T cd08215 83 GGDLSQKI 90 (258)
T ss_pred CCcHHHHH
Confidence 99998765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.8e-07 Score=91.66 Aligned_cols=84 Identities=21% Similarity=0.398 Sum_probs=70.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCC----CceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPR----EQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~----~~~~~lv~e 543 (555)
.+.||+|+||.||+|.. .+++.+++|.+..... ..+.|.+|+.+++++ +|+||+++++++.... ....++|||
T Consensus 11 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e 89 (275)
T cd06608 11 VEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVME 89 (275)
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEE
Confidence 78999999999999997 4688999999865433 346799999999998 7999999999986533 223799999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 90 ~~~~~~L~~~~ 100 (275)
T cd06608 90 LCGGGSVTDLV 100 (275)
T ss_pred cCCCCcHHHHH
Confidence 99999998765
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.2e-07 Score=96.20 Aligned_cols=82 Identities=21% Similarity=0.260 Sum_probs=67.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhc--------------HHHHHHHHHHHHcCCCCcceeeeEEEEcCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRH--------------KKEFAKEVKKIGSMRHPNIVPLRAYYWGPR 534 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~--------------~~~~~~ei~~l~~l~H~niv~l~g~~~~~~ 534 (555)
.++||+|+||.||+|+. .+++.||||.+....... ...+.+|+.+++.++|+||+++++++...+
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 93 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD 93 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence 56899999999999996 578999999885432111 125789999999999999999999998877
Q ss_pred CceEEEEEeccCCCChhhhh
Q 048796 535 EQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 535 ~~~~~lv~e~~~~GsL~~~l 554 (555)
. .++||||++ |+|.+++
T Consensus 94 ~--~~lv~e~~~-~~l~~~l 110 (335)
T PTZ00024 94 F--INLVMDIMA-SDLKKVV 110 (335)
T ss_pred c--EEEEEeccc-cCHHHHH
Confidence 7 999999997 5888765
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.1e-07 Score=94.21 Aligned_cols=83 Identities=25% Similarity=0.428 Sum_probs=69.7
Q ss_pred CCeeecCCceEEEEEEe----CCCCEEEEEEeccCCh----hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEE
Q 048796 470 AEVLGRSSHGTLYKATL----DSGHMLTVKWLRVGLV----RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~~----~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~l 540 (555)
.+.||+|+||.||.++. .+|..||+|++..... ...+.+.+|+.++.++ +|+||+++++++..... .++
T Consensus 5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~--~~l 82 (290)
T cd05613 5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTK--LHL 82 (290)
T ss_pred eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCe--EEE
Confidence 56899999999999985 3789999999865322 2346788999999999 59999999998887666 899
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
|+||+++|+|.+++
T Consensus 83 v~e~~~~~~L~~~l 96 (290)
T cd05613 83 ILDYINGGELFTHL 96 (290)
T ss_pred EEecCCCCcHHHHH
Confidence 99999999998876
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.1e-07 Score=93.91 Aligned_cols=82 Identities=22% Similarity=0.352 Sum_probs=69.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|++|.||+|.. .+|..||+|++.... ....+.+.+|+..++.++|||++++++++.+.+. .+++|||++
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~--~~iv~e~~~ 81 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENK--LYLVFEFLD 81 (283)
T ss_pred heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCe--EEEEEeccC
Confidence 56899999999999997 579999999986432 2234678899999999999999999999988776 999999995
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
++|.+++
T Consensus 82 -~~l~~~~ 88 (283)
T cd07835 82 -LDLKKYM 88 (283)
T ss_pred -cCHHHHH
Confidence 5888765
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.5e-07 Score=92.42 Aligned_cols=85 Identities=22% Similarity=0.389 Sum_probs=67.7
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCc----eEE
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ----ERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~----~~~ 539 (555)
.++||+|+||.||+|.+. +++.+|||.+... .....+++.+|+.++++++||||+++++++...+.. ..+
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 83 (273)
T cd05074 4 GRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPM 83 (273)
T ss_pred hhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceE
Confidence 568999999999999862 4688999988643 233456789999999999999999999988643211 147
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+++||+++|+|.+++
T Consensus 84 ~~~~~~~~~~l~~~~ 98 (273)
T cd05074 84 VILPFMKHGDLHTFL 98 (273)
T ss_pred EEEecCCCCcHHHHH
Confidence 899999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.6e-07 Score=93.38 Aligned_cols=82 Identities=23% Similarity=0.359 Sum_probs=68.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|++|.||+|+. .+|+.||+|.+..... ...+.+.+|+.++++++|+||+++++++..... .++|+||++
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~ 84 (294)
T PLN00009 7 VEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKR--LYLVFEYLD 84 (294)
T ss_pred EEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCe--EEEEEeccc
Confidence 56899999999999997 5789999998854322 234678899999999999999999999988777 999999996
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+ +|.+++
T Consensus 85 ~-~l~~~~ 91 (294)
T PLN00009 85 L-DLKKHM 91 (294)
T ss_pred c-cHHHHH
Confidence 4 776553
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.59 E-value=9.1e-08 Score=94.66 Aligned_cols=82 Identities=26% Similarity=0.388 Sum_probs=69.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+++.||||.++... ....+.+.+|+.+++.++|+||+++++++...+. .++++||++
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~iv~e~~~ 83 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGR--LYLVFEYVE 83 (288)
T ss_pred EEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCE--EEEEEecCC
Confidence 56899999999999997 468899999886432 2335779999999999999999999999988766 999999999
Q ss_pred CCChhhh
Q 048796 547 GDSLALH 553 (555)
Q Consensus 547 ~GsL~~~ 553 (555)
++.+..+
T Consensus 84 ~~~l~~~ 90 (288)
T cd07833 84 RTLLELL 90 (288)
T ss_pred CCHHHHH
Confidence 8776543
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.8e-07 Score=90.86 Aligned_cols=84 Identities=24% Similarity=0.396 Sum_probs=69.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|++|.||++.. .+++.+|+|.+... .....+.+.+|+.++++++|+|++++++.+...+. ..+++|||++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-~~~lv~e~~~ 83 (257)
T cd08223 5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDG-LLYIVMGFCE 83 (257)
T ss_pred EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCC-EEEEEecccC
Confidence 56899999999999997 56789999998643 22345678999999999999999999988764332 2789999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 84 ~~~l~~~l 91 (257)
T cd08223 84 GGDLYHKL 91 (257)
T ss_pred CCcHHHHH
Confidence 99998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.7e-07 Score=87.63 Aligned_cols=83 Identities=16% Similarity=0.079 Sum_probs=64.0
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-----CCCcceeeeEEEEcCCC-ceEE-EEE
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-----RHPNIVPLRAYYWGPRE-QERL-LLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-----~H~niv~l~g~~~~~~~-~~~~-lv~ 542 (555)
..+||+|+||.||. .+.....+||++........+++.+|+..++.+ .||||++++|++.+... ...+ +|+
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~ 84 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA 84 (210)
T ss_pred cceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence 67999999999996 433233479988765444567899999999999 67999999999987531 1133 789
Q ss_pred ec--cCCCChhhhh
Q 048796 543 DY--IQGDSLALHL 554 (555)
Q Consensus 543 e~--~~~GsL~~~l 554 (555)
|| +++|+|.+++
T Consensus 85 e~~G~~~~tL~~~l 98 (210)
T PRK10345 85 DFDGKPSITLTEFA 98 (210)
T ss_pred cCCCCcchhHHHHH
Confidence 99 6689998876
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.7e-07 Score=94.07 Aligned_cols=84 Identities=21% Similarity=0.372 Sum_probs=68.1
Q ss_pred CCeeecCCceEEEEEEe-C--CCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-D--SGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~--~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
...||+|+||.||+|+. . ++..||+|.+.... ....+.+.+|+.++.+++||||+++++++........++|||
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 84 (316)
T cd07842 5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFD 84 (316)
T ss_pred EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEe
Confidence 56799999999999997 3 58899999997632 233467788999999999999999999998773334999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++ +|.+++
T Consensus 85 ~~~~-~l~~~~ 94 (316)
T cd07842 85 YAEH-DLWQII 94 (316)
T ss_pred CCCc-CHHHHH
Confidence 9986 565543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=98.58 E-value=7.1e-08 Score=94.89 Aligned_cols=83 Identities=17% Similarity=0.257 Sum_probs=71.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+++. .+|..+|+|.+... .....+.+.+|+.++.+++ |+||+++++++...+. .++||||
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~--~~lv~e~ 83 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEEN--LYFVLEY 83 (280)
T ss_pred eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCce--EEEEEcC
Confidence 56899999999999997 57999999998642 2233467889999999998 9999999999887766 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 84 ~~~~~L~~~l 93 (280)
T cd05581 84 APNGELLQYI 93 (280)
T ss_pred CCCCcHHHHH
Confidence 9999998876
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.5e-07 Score=87.59 Aligned_cols=83 Identities=29% Similarity=0.532 Sum_probs=73.1
Q ss_pred CCeeecCCceEEEEEEeC-CCCEEEEEEeccCChh-cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLD-SGHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|++|.||++... ++..+|+|.+...... ..+.+.+|+..+.+++|+|++++++++..... .++++||+++
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~--~~~v~e~~~~ 81 (225)
T smart00221 4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEP--LYLVMEYCEG 81 (225)
T ss_pred eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCc--eEEEEeccCC
Confidence 568999999999999984 4889999999765544 56789999999999999999999999987766 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
++|.+++
T Consensus 82 ~~L~~~~ 88 (225)
T smart00221 82 GDLFDYL 88 (225)
T ss_pred CCHHHHH
Confidence 9998875
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.8e-07 Score=92.90 Aligned_cols=84 Identities=18% Similarity=0.352 Sum_probs=67.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|.. .+++.+|+|.++.... .....+.+|+.++++++||||+++++++...+....++|+||++
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~ 89 (293)
T cd07843 10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE 89 (293)
T ss_pred hhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC
Confidence 67899999999999998 4688999999864322 22346788999999999999999999987762223999999998
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+ +|.+++
T Consensus 90 ~-~L~~~~ 96 (293)
T cd07843 90 H-DLKSLM 96 (293)
T ss_pred c-CHHHHH
Confidence 5 887664
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.9e-07 Score=92.23 Aligned_cols=82 Identities=24% Similarity=0.397 Sum_probs=69.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC--CCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP--REQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~--~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+. .+|..+|+|++.... ....+.+.+|+.+++.++|+|++++++++... +. .++|+||
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~--~~lv~e~ 81 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGS--IYMVFEY 81 (287)
T ss_pred eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCc--EEEEecc
Confidence 46799999999999997 468899999997643 23356788999999999999999999999876 45 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++ +|.+++
T Consensus 82 ~~~-~l~~~~ 90 (287)
T cd07840 82 MDH-DLTGLL 90 (287)
T ss_pred ccc-cHHHHH
Confidence 985 777664
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.3e-07 Score=91.63 Aligned_cols=84 Identities=19% Similarity=0.358 Sum_probs=68.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcC----CCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGP----REQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~----~~~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .+++.+|+|.+.... ....++..|+.++.++ +|+||+++++++... .....+++||
T Consensus 21 ~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e 99 (282)
T cd06636 21 VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVME 99 (282)
T ss_pred heeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEE
Confidence 67899999999999997 678899999885533 2345688899999998 799999999998532 1123899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 100 ~~~~~~L~~~~ 110 (282)
T cd06636 100 FCGAGSVTDLV 110 (282)
T ss_pred eCCCCcHHHHH
Confidence 99999998875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.9e-07 Score=93.21 Aligned_cols=83 Identities=23% Similarity=0.340 Sum_probs=66.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC--------CceE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR--------EQER 538 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~--------~~~~ 538 (555)
.+.||+|+||.||+|+. .+|+.||+|.++... ......+.+|+.+++.++||||+++++++.+.. ....
T Consensus 12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 91 (302)
T cd07864 12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAF 91 (302)
T ss_pred eeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcE
Confidence 67899999999999998 568999999986432 223457788999999999999999999987644 1138
Q ss_pred EEEEeccCCCChhhh
Q 048796 539 LLLADYIQGDSLALH 553 (555)
Q Consensus 539 ~lv~e~~~~GsL~~~ 553 (555)
++|+||+++ ++.+.
T Consensus 92 ~lv~e~~~~-~l~~~ 105 (302)
T cd07864 92 YLVFEYMDH-DLMGL 105 (302)
T ss_pred EEEEcccCc-cHHHH
Confidence 999999987 55544
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.3e-07 Score=91.44 Aligned_cols=80 Identities=25% Similarity=0.409 Sum_probs=68.9
Q ss_pred eecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 473 LGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 473 lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
||+|+||.||++.. .+++.+|+|.+..... .....+..|+.+++.++|+||+++++.+...+. .++||||++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~~v~e~~~~~ 78 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEK--LYLVLEYAPGG 78 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCe--eEEEEecCCCC
Confidence 68999999999997 4689999999865432 235678999999999999999999999887776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 79 ~L~~~l 84 (250)
T cd05123 79 ELFSHL 84 (250)
T ss_pred cHHHHH
Confidence 998875
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=98.56 E-value=3e-07 Score=90.79 Aligned_cols=81 Identities=23% Similarity=0.395 Sum_probs=62.0
Q ss_pred eeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHH---HHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 472 VLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKK---IGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 472 ~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~---l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
+||+|+||.||++.. .+++.+|+|.+..... .....+.+|..+ +...+||||+.+++++...+. .++||||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~lv~e~ 78 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDK--LCFILDL 78 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCe--EEEEEec
Confidence 489999999999997 5789999998854321 112334444433 334579999999999987776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 79 ~~~~~L~~~i 88 (279)
T cd05633 79 MNGGDLHYHL 88 (279)
T ss_pred CCCCCHHHHH
Confidence 9999998765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.6e-07 Score=99.03 Aligned_cols=79 Identities=19% Similarity=0.339 Sum_probs=61.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC------CceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR------EQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~------~~~~~lv~ 542 (555)
.++||+|+||.||+|+. .+++.||||++.... ....+|+.+++.++||||+++++++.... ...+++||
T Consensus 71 ~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvm 146 (440)
T PTZ00036 71 GNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVM 146 (440)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEE
Confidence 78999999999999997 578999999885432 23457999999999999999998864321 11267899
Q ss_pred eccCCCChhhh
Q 048796 543 DYIQGDSLALH 553 (555)
Q Consensus 543 e~~~~GsL~~~ 553 (555)
||+++ +|.++
T Consensus 147 E~~~~-~l~~~ 156 (440)
T PTZ00036 147 EFIPQ-TVHKY 156 (440)
T ss_pred ecCCc-cHHHH
Confidence 99986 56554
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.6e-07 Score=97.43 Aligned_cols=76 Identities=16% Similarity=0.198 Sum_probs=65.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||++.. .+++.||+|... .+.+.+|+.++++++||||+++++++..... .++|+||+. |
T Consensus 97 ~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~--~~lv~e~~~-~ 167 (391)
T PHA03212 97 LETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKF--TCLILPRYK-T 167 (391)
T ss_pred EEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCe--eEEEEecCC-C
Confidence 67899999999999997 678999999753 2456789999999999999999999987776 899999996 5
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 168 ~L~~~l 173 (391)
T PHA03212 168 DLYCYL 173 (391)
T ss_pred CHHHHH
Confidence 787654
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.5e-08 Score=95.89 Aligned_cols=84 Identities=20% Similarity=0.321 Sum_probs=67.1
Q ss_pred CCeeecCCceEEEEEEe---CC--CCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL---DS--GHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~---~~--g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
...||+|+||.||++.- .+ ...+|+|+++.... +-.....+||.++++++||||+.|..++...+. .+++++
T Consensus 29 ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~-~v~l~f 107 (438)
T KOG0666|consen 29 IGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK-KVWLLF 107 (438)
T ss_pred cceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc-eEEEEe
Confidence 45799999999999964 22 23799999865433 235677899999999999999999999877332 399999
Q ss_pred eccCCCChhhhhC
Q 048796 543 DYIQGDSLALHLY 555 (555)
Q Consensus 543 e~~~~GsL~~~l~ 555 (555)
||++. +|.+.||
T Consensus 108 dYAEh-DL~~II~ 119 (438)
T KOG0666|consen 108 DYAEH-DLWHIIK 119 (438)
T ss_pred hhhhh-hHHHHHH
Confidence 99998 8888774
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.4e-07 Score=90.75 Aligned_cols=84 Identities=24% Similarity=0.336 Sum_probs=62.1
Q ss_pred CCeeecCCceEEEEEEe--CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcC---CCCcceeeeEEEEcC---CCceEE
Q 048796 470 AEVLGRSSHGTLYKATL--DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSM---RHPNIVPLRAYYWGP---REQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l---~H~niv~l~g~~~~~---~~~~~~ 539 (555)
.+.||+|+||.||+|+. .+|..+|||.++.... .....+.+|+.++..+ +||||++++++|... .....+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~ 85 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 85 (290)
T ss_pred eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEE
Confidence 67899999999999986 3468899998864322 2234566777776655 799999999998531 112389
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+|+||++ |+|.+++
T Consensus 86 lv~e~~~-~~l~~~~ 99 (290)
T cd07862 86 LVFEHVD-QDLTTYL 99 (290)
T ss_pred EEEccCC-CCHHHHH
Confidence 9999997 5787665
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=98.55 E-value=9.9e-08 Score=94.27 Aligned_cols=82 Identities=21% Similarity=0.316 Sum_probs=68.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|..+|+|+++.... ...+.+.+|+.++++++|+||+++++++.+... .++|+||++
T Consensus 5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~ 82 (284)
T cd07839 5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKK--LTLVFEYCD 82 (284)
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCc--eEEEEecCC
Confidence 56799999999999997 5799999999864322 224567889999999999999999999987776 999999998
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+ +|.+++
T Consensus 83 ~-~l~~~~ 89 (284)
T cd07839 83 Q-DLKKYF 89 (284)
T ss_pred C-CHHHHH
Confidence 5 776654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.4e-07 Score=89.20 Aligned_cols=82 Identities=16% Similarity=0.265 Sum_probs=64.3
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHH-HHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKK-IGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~-l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
+.||+|+||.||+|.. .+|+.||||.+..... .....+..|..+ ....+|+|++++++++...+. .++|+||+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~--~~lv~e~~ 79 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDY--LYLVMEYL 79 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCe--EEEEEecc
Confidence 3589999999999987 5689999999865322 112334455444 455689999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 80 ~~~~L~~~l 88 (260)
T cd05611 80 NGGDCASLI 88 (260)
T ss_pred CCCCHHHHH
Confidence 999998875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.3e-07 Score=91.64 Aligned_cols=83 Identities=19% Similarity=0.425 Sum_probs=71.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||++.. .++..+|+|.+.... .....++.+|+.+++.++|+||+++.+++..... .++|+||++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~~v~e~~~ 82 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNK--LCIVMEYAP 82 (256)
T ss_pred eeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCE--EEEEehhcC
Confidence 57899999999999986 578899999986532 2345678899999999999999999999887766 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+++|.+++
T Consensus 83 ~~~L~~~~ 90 (256)
T cd08530 83 FGDLSKAI 90 (256)
T ss_pred CCCHHHHH
Confidence 99998765
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.9e-07 Score=94.97 Aligned_cols=84 Identities=19% Similarity=0.310 Sum_probs=67.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|.. .+|..+|||++... .......+.+|+.+++++ +|+||++++++|...+....++|+||+
T Consensus 12 ~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~ 91 (337)
T cd07852 12 LQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYM 91 (337)
T ss_pred hHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEeccc
Confidence 67899999999999997 46889999988542 223345678899999999 999999999998654433489999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+ |+|.+++
T Consensus 92 ~-~~L~~~~ 99 (337)
T cd07852 92 E-TDLHAVI 99 (337)
T ss_pred c-cCHHHHH
Confidence 8 4887764
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.5e-07 Score=94.90 Aligned_cols=83 Identities=20% Similarity=0.246 Sum_probs=66.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 542 (555)
.+.||+|+||.||+++. .+|..||||.+... .....+.+.+|+.++..++||||+++++++..... ...++||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 105 (359)
T cd07876 26 LKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVM 105 (359)
T ss_pred EEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEE
Confidence 67899999999999987 57899999998643 22345678899999999999999999998864331 1379999
Q ss_pred eccCCCChhhh
Q 048796 543 DYIQGDSLALH 553 (555)
Q Consensus 543 e~~~~GsL~~~ 553 (555)
||+++ +|.+.
T Consensus 106 e~~~~-~l~~~ 115 (359)
T cd07876 106 ELMDA-NLCQV 115 (359)
T ss_pred eCCCc-CHHHH
Confidence 99986 45443
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.1e-07 Score=91.42 Aligned_cols=82 Identities=24% Similarity=0.368 Sum_probs=67.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|..+|+|.+..... ...+.+.+|+.+++.++|||++++++++.+.+. .|+||||+
T Consensus 26 ~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~ 103 (313)
T cd06633 26 LHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHT--AWLVMEYC 103 (313)
T ss_pred ceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCE--EEEEEecC
Confidence 46799999999999997 5788999999864322 234578899999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
. |++.+++
T Consensus 104 ~-~~l~~~l 111 (313)
T cd06633 104 L-GSASDLL 111 (313)
T ss_pred C-CCHHHHH
Confidence 6 4666543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.3e-07 Score=91.88 Aligned_cols=84 Identities=26% Similarity=0.398 Sum_probs=67.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|.. .+|..||+|.++.... .....+.+|+.++.+++|+||+++++++........++|+||++
T Consensus 12 ~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 91 (309)
T cd07845 12 LNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE 91 (309)
T ss_pred eeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC
Confidence 67899999999999997 5799999999864322 12345678999999999999999999987654334899999997
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+ +|.+++
T Consensus 92 ~-~l~~~l 98 (309)
T cd07845 92 Q-DLASLL 98 (309)
T ss_pred C-CHHHHH
Confidence 5 676654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.4e-07 Score=99.12 Aligned_cols=84 Identities=19% Similarity=0.361 Sum_probs=67.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCC---CceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPR---EQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~---~~~~~lv~e~ 544 (555)
.++||.|.+|.||+++. ++|+..|||.++.... ..++...|..++... +|||++.++|++...+ .+++||||||
T Consensus 24 ~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEf 102 (953)
T KOG0587|consen 24 IEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEF 102 (953)
T ss_pred EEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeec
Confidence 67899999999999986 7889999998865433 346677778877765 7999999999985322 2349999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
|.+|+..|++
T Consensus 103 C~gGSVTDLV 112 (953)
T KOG0587|consen 103 CGGGSVTDLV 112 (953)
T ss_pred cCCccHHHHH
Confidence 9999998876
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.5e-08 Score=103.99 Aligned_cols=81 Identities=20% Similarity=0.339 Sum_probs=69.0
Q ss_pred CeeecCCceEEEEEEeC-CCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 471 EVLGRSSHGTLYKATLD-SGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
..||.|+||.||+++.+ .+...|.|.+........++|+-||.+++.++||+||+|++.|.-.+. +|++.|||.||.
T Consensus 38 GELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enk--LwiliEFC~GGA 115 (1187)
T KOG0579|consen 38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENK--LWILIEFCGGGA 115 (1187)
T ss_pred hhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCc--eEEEEeecCCch
Confidence 45899999999999974 456677898877666678899999999999999999999988776666 999999999998
Q ss_pred hhhh
Q 048796 550 LALH 553 (555)
Q Consensus 550 L~~~ 553 (555)
...+
T Consensus 116 VDai 119 (1187)
T KOG0579|consen 116 VDAI 119 (1187)
T ss_pred HhHH
Confidence 7643
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.1e-07 Score=92.66 Aligned_cols=83 Identities=22% Similarity=0.318 Sum_probs=65.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC-----ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG-----LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~-----~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+++. ..+..+++|.++.. .......+..|+.++++++||||+++++++...+. .++|||
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e 82 (260)
T cd08222 5 QQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDA--FCIITE 82 (260)
T ss_pred eeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCc--eEEEEE
Confidence 56899999999999987 33445556655431 12234467789999999999999999999887776 899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++++|.+++
T Consensus 83 ~~~~~~l~~~~ 93 (260)
T cd08222 83 YCEGRDLDCKL 93 (260)
T ss_pred eCCCCCHHHHH
Confidence 99999998765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.4e-07 Score=89.86 Aligned_cols=79 Identities=20% Similarity=0.307 Sum_probs=65.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||++.. .+|+.+|+|.+.... ......+.+|+.++.++. |+||+++++++..... .++++||++
T Consensus 9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~--~~~~~e~~~ 86 (288)
T cd06616 9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGD--CWICMELMD 86 (288)
T ss_pred HHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCc--EEEEEeccc
Confidence 56899999999999997 578999999986432 234567899999999996 9999999999887666 899999987
Q ss_pred CCChh
Q 048796 547 GDSLA 551 (555)
Q Consensus 547 ~GsL~ 551 (555)
. ++.
T Consensus 87 ~-~l~ 90 (288)
T cd06616 87 I-SLD 90 (288)
T ss_pred C-CHH
Confidence 5 443
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.5e-07 Score=92.80 Aligned_cols=82 Identities=23% Similarity=0.432 Sum_probs=67.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+++.+|+|++..... .......+|+..+++++ |+||+++++++...+. .++||||+
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~--~~lv~e~~- 80 (283)
T cd07830 4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDE--LYFVFEYM- 80 (283)
T ss_pred heeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCc--EEEEEecC-
Confidence 56899999999999998 4688999999865322 22334567999999999 9999999999988766 99999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 81 ~~~l~~~~ 88 (283)
T cd07830 81 EGNLYQLM 88 (283)
T ss_pred CCCHHHHH
Confidence 78998765
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.1e-07 Score=92.21 Aligned_cols=83 Identities=24% Similarity=0.425 Sum_probs=68.8
Q ss_pred CCeeecCCceEEEEEEe----CCCCEEEEEEeccCCh----hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEE
Q 048796 470 AEVLGRSSHGTLYKATL----DSGHMLTVKWLRVGLV----RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~~----~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~l 540 (555)
.+.||+|+||.||+++. .++..+|||.++.... ...+.+.+|+.++.++ +|+||+++.+.+...+. .++
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~--~~l 82 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTK--LHL 82 (288)
T ss_pred EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCE--EEE
Confidence 56899999999999985 3578899999864321 2346688999999999 59999999998877666 899
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
||||+++|+|.+++
T Consensus 83 v~e~~~~~~L~~~~ 96 (288)
T cd05583 83 ILDYVNGGELFTHL 96 (288)
T ss_pred EEecCCCCcHHHHH
Confidence 99999999998765
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=98.50 E-value=4e-07 Score=89.72 Aligned_cols=84 Identities=15% Similarity=0.287 Sum_probs=65.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .++..+|+|.+..... .......+|+..+.++. |+||+++++++.+...+..++|+||++
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 83 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD 83 (282)
T ss_pred EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC
Confidence 46799999999999997 5789999999865322 22334567888899885 999999999998772223999999997
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
|+|.+++
T Consensus 84 -~~l~~~l 90 (282)
T cd07831 84 -MNLYELI 90 (282)
T ss_pred -ccHHHHH
Confidence 4777654
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=98.50 E-value=4.7e-07 Score=91.64 Aligned_cols=83 Identities=20% Similarity=0.294 Sum_probs=67.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||++.. .+|..+|||++... .....+.+.+|+.++..++||||+++.+++..... ..++++||+.
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~-~~~lv~e~~~ 93 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE-DIYFVTELLG 93 (328)
T ss_pred EEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC-cEEEEeehhc
Confidence 67899999999999986 58999999988542 22235678899999999999999999998875332 2899999984
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
++|.+++
T Consensus 94 -~~L~~~~ 100 (328)
T cd07856 94 -TDLHRLL 100 (328)
T ss_pred -cCHHHHH
Confidence 5887664
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=98.48 E-value=6.2e-07 Score=89.91 Aligned_cols=82 Identities=23% Similarity=0.370 Sum_probs=67.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .++..+|+|.+... .....+++.+|+.+++.++|+|++++.+++..... .++|+||+
T Consensus 20 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~ 97 (308)
T cd06634 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT--AWLVMEYC 97 (308)
T ss_pred HHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCe--eEEEEEcc
Confidence 56799999999999997 56889999988542 22234578899999999999999999999987766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
. |++.+++
T Consensus 98 ~-~~l~~~~ 105 (308)
T cd06634 98 L-GSASDLL 105 (308)
T ss_pred C-CCHHHHH
Confidence 7 5776654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.47 E-value=7.9e-09 Score=86.35 Aligned_cols=137 Identities=30% Similarity=0.395 Sum_probs=95.5
Q ss_pred CccEEEcCCCcCCCCCchh---hhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccc
Q 048796 102 RLVTLDVSSNQLKGPIPDN---FFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDI 178 (555)
Q Consensus 102 ~L~~L~L~~N~l~~~~~~~---~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~ 178 (555)
.+..+||++|++. .+++. +.....|+.++|++|.+.. .|..|... ++.++.|+|++|.|+ .+|..+
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~-fp~kft~k--------f~t~t~lNl~~neis-dvPeE~ 96 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKK-FPKKFTIK--------FPTATTLNLANNEIS-DVPEEL 96 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhh-CCHHHhhc--------cchhhhhhcchhhhh-hchHHH
Confidence 3556777777764 34443 3344556667888887763 33333221 267888999999998 456679
Q ss_pred cCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-c-CCCEEEeccCCCCCCcCccccCC
Q 048796 179 GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-L-KLNEFNVSYNDLSGPIPENLRNF 251 (555)
Q Consensus 179 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~-~L~~L~ls~N~l~~~~p~~l~~~ 251 (555)
..++.|+.|++++|.|. ..|..+..+.+|..||..+|.+. .+|..+. + ..-..++.++++.+..|..+..+
T Consensus 97 Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~klqa~ 169 (177)
T KOG4579|consen 97 AAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKLQAL 169 (177)
T ss_pred hhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCccccccc
Confidence 99999999999999998 67788888999999999999988 5555444 3 33345667778887766554433
|
|
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=98.47 E-value=6.2e-07 Score=88.43 Aligned_cols=81 Identities=23% Similarity=0.399 Sum_probs=62.3
Q ss_pred eeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHH---HHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 472 VLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEV---KKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 472 ~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei---~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
+||+|+||.||++.. .+++.||+|.+..... .....+..|. ..++...||+|+++.+++...+. .++|+||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~v~e~ 78 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK--LSFILDL 78 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCE--EEEEEec
Confidence 489999999999987 5689999999864322 1122344443 34555689999999999887766 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 79 ~~g~~L~~~l 88 (278)
T cd05606 79 MNGGDLHYHL 88 (278)
T ss_pred CCCCcHHHHH
Confidence 9999998765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.2e-07 Score=96.78 Aligned_cols=76 Identities=17% Similarity=0.148 Sum_probs=64.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
...||+|+||.||+++. ..++.||||... ...+.+|+.++++++|+|||++++++...+. .++||||+. |
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~--~~lv~e~~~-~ 244 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGL--TCLVLPKYR-S 244 (461)
T ss_pred EEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCE--EEEEEEccC-C
Confidence 67899999999999998 468899999642 2346789999999999999999999987776 899999995 6
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 245 ~L~~~l 250 (461)
T PHA03211 245 DLYTYL 250 (461)
T ss_pred CHHHHH
Confidence 887765
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=98.47 E-value=4.9e-07 Score=92.15 Aligned_cols=84 Identities=19% Similarity=0.285 Sum_probs=67.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 542 (555)
.+.||+|+||.||++.. .+|..||||++.... ....+.+.+|+.+++.++||||+++++++..... .+.++|+
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 99 (343)
T cd07880 20 LKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVM 99 (343)
T ss_pred EEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEE
Confidence 67899999999999986 679999999985432 2234678899999999999999999998865432 1258999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+ +++|.+++
T Consensus 100 e~~-~~~l~~~~ 110 (343)
T cd07880 100 PFM-GTDLGKLM 110 (343)
T ss_pred ecC-CCCHHHHH
Confidence 999 66887654
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=98.46 E-value=5.4e-07 Score=90.13 Aligned_cols=84 Identities=18% Similarity=0.245 Sum_probs=66.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC------ceEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE------QERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~------~~~~l 540 (555)
...||+|+||.||+|+. .+++.||||.+.... ......+.+|+.++++++||||++++++|...+. ...++
T Consensus 17 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 96 (310)
T cd07865 17 LAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYL 96 (310)
T ss_pred EEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEE
Confidence 67899999999999997 578999999885432 2223456789999999999999999999875432 12599
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
||||+.+ +|.+++
T Consensus 97 v~e~~~~-~l~~~l 109 (310)
T cd07865 97 VFEFCEH-DLAGLL 109 (310)
T ss_pred EEcCCCc-CHHHHH
Confidence 9999975 676553
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.46 E-value=4e-07 Score=99.48 Aligned_cols=92 Identities=25% Similarity=0.350 Sum_probs=74.4
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEe----CC----CCEEEEEEeccCCh-hcHHHHHHHHHHHHcC-CCCcceeeeEE
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATL----DS----GHMLTVKWLRVGLV-RHKKEFAKEVKKIGSM-RHPNIVPLRAY 529 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~----~~----g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l-~H~niv~l~g~ 529 (555)
+..+.+.. .+.+|+|.||.|++|.. +. ...||||.++.... ...+.+..|+.+|..+ +|+||+.++|+
T Consensus 293 ~~~~~l~~--~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 293 IPRENLKL--GKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred echhhccc--cceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 44444433 55999999999999985 22 45799999975433 4568899999999998 59999999999
Q ss_pred EEcCCCceEEEEEeccCCCChhhhhC
Q 048796 530 YWGPREQERLLLADYIQGDSLALHLY 555 (555)
Q Consensus 530 ~~~~~~~~~~lv~e~~~~GsL~~~l~ 555 (555)
|..... .++|.||++.|+|.++|+
T Consensus 371 ~t~~~~--~~~v~Ey~~~G~L~~~Lr 394 (609)
T KOG0200|consen 371 CTQDGP--LYVIVEYAEHGDLLEFLR 394 (609)
T ss_pred eccCCc--eEEEEEeccCCcHHHHHH
Confidence 988666 999999999999998874
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.3e-07 Score=92.07 Aligned_cols=82 Identities=17% Similarity=0.182 Sum_probs=65.9
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
++.+|.|+++.||++.. +++.||||++... .....+.+.+|+.+++.++|+||+++++++...+. .+++|||+++
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~--~~~~~e~~~~ 83 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSE--LYVVSPLMAY 83 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCe--EEEEEeccCC
Confidence 33455556666666655 7999999998653 23345789999999999999999999999987776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 84 ~~l~~~l 90 (314)
T cd08216 84 GSCEDLL 90 (314)
T ss_pred CCHHHHH
Confidence 9998876
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.3e-07 Score=93.36 Aligned_cols=84 Identities=24% Similarity=0.293 Sum_probs=68.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC------------c
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE------------Q 536 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~------------~ 536 (555)
.+.||+|+||.||+|+. .+|..||+|.+........+.+.+|+.++++++||||+++++++..... .
T Consensus 10 ~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (342)
T cd07854 10 LRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELN 89 (342)
T ss_pred EEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccc
Confidence 67899999999999997 6789999999866555556778999999999999999999977654321 1
Q ss_pred eEEEEEeccCCCChhhhh
Q 048796 537 ERLLLADYIQGDSLALHL 554 (555)
Q Consensus 537 ~~~lv~e~~~~GsL~~~l 554 (555)
..++|+||++ ++|.+++
T Consensus 90 ~~~lv~e~~~-~~L~~~~ 106 (342)
T cd07854 90 SVYIVQEYME-TDLANVL 106 (342)
T ss_pred eEEEEeeccc-ccHHHHH
Confidence 2689999998 4787654
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=98.44 E-value=8.1e-07 Score=88.43 Aligned_cols=89 Identities=18% Similarity=0.311 Sum_probs=68.3
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEeC-CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCc
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATLD-SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQ 536 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~ 536 (555)
++.+++.. .+.||+|+||.||+|... ++..||||.++.... ...+++..|+..+.+.. |+||++++++|.....
T Consensus 12 ~~~~~~~~--~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~- 88 (296)
T cd06618 12 ADLNDLEN--LGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSD- 88 (296)
T ss_pred CCcchhee--eeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCe-
Confidence 34444433 779999999999999984 489999999865432 23456777887777765 9999999999988776
Q ss_pred eEEEEEeccCCCChhhh
Q 048796 537 ERLLLADYIQGDSLALH 553 (555)
Q Consensus 537 ~~~lv~e~~~~GsL~~~ 553 (555)
.+++|||+++ ++.++
T Consensus 89 -~~~v~e~~~~-~l~~l 103 (296)
T cd06618 89 -VFICMELMST-CLDKL 103 (296)
T ss_pred -EEEEeeccCc-CHHHH
Confidence 9999999864 55543
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.44 E-value=9.4e-08 Score=87.93 Aligned_cols=85 Identities=19% Similarity=0.246 Sum_probs=73.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC---CCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP---REQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~---~~~~~~lv~e~~ 545 (555)
.+.+|+|||+.||.++. .++..||+|++.-...++.+..++|++.-++++||||++++.++..+ ...+.|++++|.
T Consensus 26 ~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy 105 (302)
T KOG2345|consen 26 QRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYY 105 (302)
T ss_pred eeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehh
Confidence 77899999999999984 78999999999766666788899999999999999999999886322 223599999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
..|+|.+.+
T Consensus 106 ~~Gsl~d~i 114 (302)
T KOG2345|consen 106 KRGSLLDEI 114 (302)
T ss_pred ccccHHHHH
Confidence 999999876
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.43 E-value=7.8e-08 Score=91.55 Aligned_cols=83 Identities=23% Similarity=0.422 Sum_probs=70.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHH---HHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKE---FAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~---~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
-++||+|.||+|..++. .+|+.||+|.+++.-.....+ -..|-+++...+||-+..|...++..+. +++||||+
T Consensus 173 LKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~dr--lCFVMeya 250 (516)
T KOG0690|consen 173 LKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDR--LCFVMEYA 250 (516)
T ss_pred HHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCce--EEEEEEEc
Confidence 67899999999999997 689999999997654433333 3457789999999999999888888887 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
.||.|+-+|
T Consensus 251 nGGeLf~HL 259 (516)
T KOG0690|consen 251 NGGELFFHL 259 (516)
T ss_pred cCceEeeeh
Confidence 999998765
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.8e-07 Score=90.77 Aligned_cols=82 Identities=27% Similarity=0.392 Sum_probs=70.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+++.+|+|.+.... ....+.+..|+.++++++|+||+++++++...+. .++|+||++
T Consensus 4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~--~~~v~e~~~ 81 (282)
T cd07829 4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERK--LYLVFEYCD 81 (282)
T ss_pred ehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCc--eEEEecCcC
Confidence 46799999999999998 568999999987543 2335678899999999999999999999987776 999999998
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
++|.+++
T Consensus 82 -~~l~~~i 88 (282)
T cd07829 82 -MDLKKYL 88 (282)
T ss_pred -cCHHHHH
Confidence 4898776
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=98.43 E-value=7.2e-07 Score=91.74 Aligned_cols=83 Identities=17% Similarity=0.230 Sum_probs=66.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 542 (555)
.+.||+|+||.||++.. ..++.||||++.... ....+.+.+|+.+++.++||||+++++++...+. ...++||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~ 108 (364)
T cd07875 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108 (364)
T ss_pred EEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEE
Confidence 67899999999999986 578899999986432 2335678899999999999999999998754321 1379999
Q ss_pred eccCCCChhhh
Q 048796 543 DYIQGDSLALH 553 (555)
Q Consensus 543 e~~~~GsL~~~ 553 (555)
||+++ +|.++
T Consensus 109 e~~~~-~l~~~ 118 (364)
T cd07875 109 ELMDA-NLCQV 118 (364)
T ss_pred eCCCC-CHHHH
Confidence 99986 56554
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.42 E-value=6e-08 Score=106.08 Aligned_cols=83 Identities=22% Similarity=0.235 Sum_probs=72.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
..+||+|+||.|...+. .+++.||.|++..+.. ....-|+.|-.+|.--..+.||.|...+.+... +|+|||||
T Consensus 80 lKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~--LYlVMdY~ 157 (1317)
T KOG0612|consen 80 LKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERY--LYLVMDYM 157 (1317)
T ss_pred HHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccc--eEEEEecc
Confidence 67999999999999998 5789999999976432 235668889999999999999999988888887 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+||+|..++
T Consensus 158 pGGDlltLl 166 (1317)
T KOG0612|consen 158 PGGDLLTLL 166 (1317)
T ss_pred cCchHHHHH
Confidence 999998765
|
|
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=98.42 E-value=6.9e-07 Score=88.45 Aligned_cols=84 Identities=30% Similarity=0.374 Sum_probs=62.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh--cHHHHHHHHHHHHcC---CCCcceeeeEEEEcCC---CceEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR--HKKEFAKEVKKIGSM---RHPNIVPLRAYYWGPR---EQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~~ei~~l~~l---~H~niv~l~g~~~~~~---~~~~~l 540 (555)
.+.||+|+||.||+|+. .+|+.||+|.+...... ....+.+|+.++..+ +||||+++++++.... ....++
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~l 84 (288)
T cd07863 5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTL 84 (288)
T ss_pred eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEE
Confidence 56899999999999997 57899999998653221 234566777766654 7999999999886421 123799
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
++||+++ +|.+++
T Consensus 85 v~e~~~~-~l~~~~ 97 (288)
T cd07863 85 VFEHVDQ-DLRTYL 97 (288)
T ss_pred EEccccc-CHHHHH
Confidence 9999985 777664
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=98.42 E-value=5.4e-07 Score=91.82 Aligned_cols=84 Identities=19% Similarity=0.252 Sum_probs=66.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC----CceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR----EQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~----~~~~~lv~ 542 (555)
.+.||+|+||.||+|.. .++..||||.+..... ...+.+.+|+.+++.++||||+++++++.... ....++++
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~ 99 (343)
T cd07878 20 LTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVT 99 (343)
T ss_pred heecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEe
Confidence 67899999999999986 6788999999865322 23466889999999999999999998875321 11378999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
|++ +++|.+++
T Consensus 100 ~~~-~~~l~~~~ 110 (343)
T cd07878 100 NLM-GADLNNIV 110 (343)
T ss_pred ecC-CCCHHHHH
Confidence 988 67887654
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=98.41 E-value=8.7e-07 Score=88.04 Aligned_cols=84 Identities=19% Similarity=0.279 Sum_probs=66.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCC---ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPRE---QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~---~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|+.||+|.++.... .....+.+|+.+++.++ |+||+++++++...+. ...|+||
T Consensus 6 ~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~ 85 (295)
T cd07837 6 LEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVF 85 (295)
T ss_pred eeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEe
Confidence 67899999999999997 5789999998864322 23467889999999995 6999999998865332 1269999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++ +|.+++
T Consensus 86 e~~~~-~l~~~~ 96 (295)
T cd07837 86 EYLDS-DLKKFM 96 (295)
T ss_pred eccCc-CHHHHH
Confidence 99996 787664
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.40 E-value=3.8e-08 Score=91.51 Aligned_cols=164 Identities=20% Similarity=0.228 Sum_probs=77.9
Q ss_pred ccCCCCccEEEeeCCcCCCCCch----hccCCCCccEEEcCCCcCCCCCch-----hh---------hCCCCCCeEEccC
Q 048796 73 TSQFDRLSTFNIRNNSVTGTLPS----LLEISPRLVTLDVSSNQLKGPIPD-----NF---------FSSMALTNLNLSG 134 (555)
Q Consensus 73 ~~~l~~L~~L~L~~N~l~~~~~~----~l~~l~~L~~L~L~~N~l~~~~~~-----~~---------~~~~~L~~L~Ls~ 134 (555)
+.++++|+..+||+|.+....|. .++..+.|.+|.|++|.+. .+.. ++ ..-+.|+.+....
T Consensus 88 Llkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlG-p~aG~rigkal~~la~nKKaa~kp~Le~vicgr 166 (388)
T COG5238 88 LLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLG-PIAGGRIGKALFHLAYNKKAADKPKLEVVICGR 166 (388)
T ss_pred HhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCC-ccchhHHHHHHHHHHHHhhhccCCCceEEEecc
Confidence 34556666666666665544332 2344455666666666553 2211 11 1234566666666
Q ss_pred CcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCC-----ccccCccccceeecccccccCCC----chhccCC
Q 048796 135 NGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLP-----SDIGNMGRLRLLNLANNHLSGKM----PSELSKL 205 (555)
Q Consensus 135 N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p-----~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l 205 (555)
|.+..-.-..+.. .+.....|+.+.+..|.|.-... ..+..+.+|+.|||+.|-++-.. ...+...
T Consensus 167 NRlengs~~~~a~-----~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W 241 (388)
T COG5238 167 NRLENGSKELSAA-----LLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEW 241 (388)
T ss_pred chhccCcHHHHHH-----HHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhccc
Confidence 6554211100000 12222455666666665542110 11223456666666666665222 1223344
Q ss_pred CCCCEEeCCCCcCCCCCChhhh--------cCCCEEEeccCCCCC
Q 048796 206 GALEYLDLSGNQFKGEIPDKLS--------LKLNEFNVSYNDLSG 242 (555)
Q Consensus 206 ~~L~~L~Ls~N~l~~~~p~~~~--------~~L~~L~ls~N~l~~ 242 (555)
+.|+.|.+..|.++......+. ++|..|-..+|...+
T Consensus 242 ~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~ 286 (388)
T COG5238 242 NLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRG 286 (388)
T ss_pred chhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcC
Confidence 5566666666666644333221 556666666666554
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.8e-07 Score=91.80 Aligned_cols=84 Identities=20% Similarity=0.321 Sum_probs=67.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC--CceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR--EQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~--~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|.. .+|..||+|++.... ....+.+.+|+.++.+++||||+++++++.... ....++|+||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 89 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDL 89 (334)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEeh
Confidence 67899999999999997 579999999986532 223567788999999999999999998875322 1238999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+. |+|.+++
T Consensus 90 ~~-~~l~~~~ 98 (334)
T cd07855 90 ME-SDLHHII 98 (334)
T ss_pred hh-hhHHHHh
Confidence 96 5887765
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=98.39 E-value=6.6e-07 Score=91.65 Aligned_cols=83 Identities=18% Similarity=0.230 Sum_probs=65.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 542 (555)
.+.||+|+||.||++.. ..++.+|||.+... .....+.+.+|+.+++.++||||+++++++..... ...++||
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 101 (355)
T cd07874 22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVM 101 (355)
T ss_pred EEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEh
Confidence 67899999999999986 57889999998643 22335678899999999999999999998864321 1379999
Q ss_pred eccCCCChhhh
Q 048796 543 DYIQGDSLALH 553 (555)
Q Consensus 543 e~~~~GsL~~~ 553 (555)
||+++ +|.+.
T Consensus 102 e~~~~-~l~~~ 111 (355)
T cd07874 102 ELMDA-NLCQV 111 (355)
T ss_pred hhhcc-cHHHH
Confidence 99986 55543
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.7e-08 Score=92.78 Aligned_cols=206 Identities=21% Similarity=0.202 Sum_probs=133.9
Q ss_pred CCEEECCCCcCCCCC-----CCCCCCCCEEEcCCCcCCCCC--cccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 10 LSVLNLSSNSLSGTL-----PTSLKSCVILDLSRNMISGDI--SDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~-----~~~l~~L~~L~L~~N~l~~~~--~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
++.|-+.++.|...- .+....++.|||.+|.|+... ..+...++.|+.|+|+.|.+...+...-..+.+|++|
T Consensus 47 ~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~l 126 (418)
T KOG2982|consen 47 LELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVL 126 (418)
T ss_pred hhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEE
Confidence 445666666665321 123456789999999998643 4567788999999999999985444333567789999
Q ss_pred EeeCCcCCCC-CchhccCCCCccEEEcCCCcCCCCCc--hhhh-CCCCCCeEEccCCcccccCCcCccccccccccCCCC
Q 048796 83 NIRNNSVTGT-LPSLLEISPRLVTLDVSSNQLKGPIP--DNFF-SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYP 158 (555)
Q Consensus 83 ~L~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~~--~~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~ 158 (555)
.|.+..+... ....+..+|.+++|+++.|.+....- .... ..+.++.|.+..|...-.. ...++. .-+|
T Consensus 127 VLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~--~~~~l~-----r~Fp 199 (418)
T KOG2982|consen 127 VLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWL--NKNKLS-----RIFP 199 (418)
T ss_pred EEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHH--HHHhHH-----hhcc
Confidence 9999888743 34566788999999999995542111 1111 1224444444444332100 000111 1237
Q ss_pred CcCEEEccCCcCCCcC-CccccCccccceeecccccccC-CCchhccCCCCCCEEeCCCCcCCCCC
Q 048796 159 PMESLDLSGNALTGVL-PSDIGNMGRLRLLNLANNHLSG-KMPSELSKLGALEYLDLSGNQFKGEI 222 (555)
Q Consensus 159 ~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~ 222 (555)
++..+.+..|.+...- ...+..++.+.-|+|+.|+|.. .--+.+.+++.|..|.+++|.+....
T Consensus 200 nv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l 265 (418)
T KOG2982|consen 200 NVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPL 265 (418)
T ss_pred cchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccc
Confidence 8888888888776432 2345566777789999999863 33467788999999999999887543
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.7e-07 Score=91.65 Aligned_cols=84 Identities=18% Similarity=0.309 Sum_probs=69.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC---CceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR---EQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .+|..+|||++.... ....+.+.+|+.+++.++|+||+++.+++...+ ....+++||
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e 84 (330)
T cd07834 5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTE 84 (330)
T ss_pred eeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEec
Confidence 57899999999999997 458999999986543 334577999999999999999999999987654 112899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++ +|.+++
T Consensus 85 ~~~~-~l~~~l 94 (330)
T cd07834 85 LMET-DLHKVI 94 (330)
T ss_pred chhh-hHHHHH
Confidence 9985 787665
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=7e-07 Score=91.54 Aligned_cols=76 Identities=16% Similarity=0.179 Sum_probs=63.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .++..||+|..... ....|+.++++++||||+++++++...+. .++|+||+. |
T Consensus 71 ~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~-~ 141 (357)
T PHA03209 71 IKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAI--TCMVLPHYS-S 141 (357)
T ss_pred EEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCe--eEEEEEccC-C
Confidence 67899999999999997 46788999975432 23568999999999999999999988776 899999995 5
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 142 ~l~~~l 147 (357)
T PHA03209 142 DLYTYL 147 (357)
T ss_pred cHHHHH
Confidence 787765
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=98.38 E-value=6.8e-07 Score=90.84 Aligned_cols=84 Identities=14% Similarity=0.281 Sum_probs=66.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC---ceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE---QERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~---~~~~lv~e 543 (555)
...||+|+||.||+++. .++..||||.+... .......+.+|+.+++.++|+||+++++++..... ...++|+|
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 89 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYE 89 (337)
T ss_pred EEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEe
Confidence 56899999999999997 67899999998643 22334567889999999999999999998764321 13799999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+. ++|.+++
T Consensus 90 ~~~-~~L~~~~ 99 (337)
T cd07858 90 LMD-TDLHQII 99 (337)
T ss_pred CCC-CCHHHHH
Confidence 997 5777654
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.2e-06 Score=89.79 Aligned_cols=84 Identities=20% Similarity=0.283 Sum_probs=66.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 542 (555)
.+.||+|+||.||++.. .+|+.||+|.+... .....+.+.+|+.++.+++|+||+++++++..... ...++|+
T Consensus 21 ~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 100 (353)
T cd07850 21 LKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVM 100 (353)
T ss_pred EEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEE
Confidence 67899999999999997 57999999998642 22335678889999999999999999998864321 1279999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++ +|.+.+
T Consensus 101 e~~~~-~l~~~~ 111 (353)
T cd07850 101 ELMDA-NLCQVI 111 (353)
T ss_pred eccCC-CHHHHH
Confidence 99975 777654
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.6e-06 Score=84.95 Aligned_cols=75 Identities=17% Similarity=0.146 Sum_probs=58.0
Q ss_pred eecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHc-CCCCcceeeeEEEEcCCCceEEEEEeccCCCCh
Q 048796 473 LGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGS-MRHPNIVPLRAYYWGPREQERLLLADYIQGDSL 550 (555)
Q Consensus 473 lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~-l~H~niv~l~g~~~~~~~~~~~lv~e~~~~GsL 550 (555)
+|+|+||.||+++. .++..+|+|.+........ |+..... .+||||+++++++...+. .++||||+++|+|
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~--~~iv~e~~~~~~L 96 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKG--HVLIMDYIKDGDL 96 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCe--eEEEEEcCCCCcH
Confidence 69999999999997 5788999999864322111 2222221 279999999999988776 9999999999999
Q ss_pred hhhh
Q 048796 551 ALHL 554 (555)
Q Consensus 551 ~~~l 554 (555)
.+++
T Consensus 97 ~~~l 100 (267)
T PHA03390 97 FDLL 100 (267)
T ss_pred HHHH
Confidence 8876
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.3e-06 Score=79.51 Aligned_cols=80 Identities=28% Similarity=0.441 Sum_probs=69.3
Q ss_pred eecCCceEEEEEEeC-CCCEEEEEEeccCChh-cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCCh
Q 048796 473 LGRSSHGTLYKATLD-SGHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDSL 550 (555)
Q Consensus 473 lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~GsL 550 (555)
||+|++|.||++... ++..+++|........ ..+.+.+|+..+..++|++++++++++..... .++++||+++++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~--~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENH--LYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCe--EEEEEecCCCCcH
Confidence 689999999999984 4899999999765432 34679999999999999999999999987666 9999999999999
Q ss_pred hhhh
Q 048796 551 ALHL 554 (555)
Q Consensus 551 ~~~l 554 (555)
.+++
T Consensus 79 ~~~~ 82 (215)
T cd00180 79 KDLL 82 (215)
T ss_pred HHHH
Confidence 8875
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.35 E-value=9.7e-07 Score=89.68 Aligned_cols=84 Identities=15% Similarity=0.226 Sum_probs=66.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC---ceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE---QERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~---~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ......+.+|+.++++++|+||+++++++..... ...++++||
T Consensus 10 ~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 89 (336)
T cd07849 10 LSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQEL 89 (336)
T ss_pred EEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehh
Confidence 67899999999999986 678999999986422 2335668899999999999999999988764331 137999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++ +|.+++
T Consensus 90 ~~~-~l~~~~ 98 (336)
T cd07849 90 MET-DLYKLI 98 (336)
T ss_pred ccc-CHHHHH
Confidence 975 776543
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.35 E-value=6.4e-08 Score=91.18 Aligned_cols=206 Identities=22% Similarity=0.243 Sum_probs=134.7
Q ss_pred CEEEcCCCcCCCCC--cccccCCCCccEEEccCCcCCC--CCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEE
Q 048796 32 VILDLSRNMISGDI--SDMQNWEANLEILDLSSNKLSG--SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLD 107 (555)
Q Consensus 32 ~~L~L~~N~l~~~~--~~~~~~~~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 107 (555)
..|-+.++.|..+. ..+....+.++.|||.+|.|++ .+...+.+++.|+.|+|+.|.+...+...-..+.+|+.|-
T Consensus 48 ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lV 127 (418)
T KOG2982|consen 48 ELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLV 127 (418)
T ss_pred hhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEE
Confidence 35666677775433 2334455689999999999984 3444567899999999999999866544334677999999
Q ss_pred cCCCcCCCC-CchhhhCCCCCCeEEccCCcccccC--CcCccccc-cccccCCCCCcCEEEccCCcCCCcCCccccCccc
Q 048796 108 VSSNQLKGP-IPDNFFSSMALTNLNLSGNGFSGAI--PLRSSHAS-ELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGR 183 (555)
Q Consensus 108 L~~N~l~~~-~~~~~~~~~~L~~L~Ls~N~l~~~~--p~~~~~~~-~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 183 (555)
|.+..+.=. ....+..++.++.|.++.|.+.-.. ......+. .+..+...+.+..+.++-|++... +++
T Consensus 128 LNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~-------Fpn 200 (418)
T KOG2982|consen 128 LNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRI-------FPN 200 (418)
T ss_pred EcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhh-------ccc
Confidence 998877522 2334566888999999999554211 11111111 122222334444444444455432 356
Q ss_pred cceeecccccccCCC-chhccCCCCCCEEeCCCCcCCCCCCh-hhh--cCCCEEEeccCCCCCCc
Q 048796 184 LRLLNLANNHLSGKM-PSELSKLGALEYLDLSGNQFKGEIPD-KLS--LKLNEFNVSYNDLSGPI 244 (555)
Q Consensus 184 L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~--~~L~~L~ls~N~l~~~~ 244 (555)
+..+-+..|.|...- -..+..++.+..|+|+.|+|.....- .+. +.|..|.+++|++....
T Consensus 201 v~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l 265 (418)
T KOG2982|consen 201 VNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPL 265 (418)
T ss_pred chheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccc
Confidence 778888888886322 23456678888999999999854332 222 78999999999997654
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.1e-06 Score=86.69 Aligned_cols=82 Identities=21% Similarity=0.381 Sum_probs=69.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|++|.||+|.. .+|+.+|+|.+..... .....+.+|+.++++++|+||+++++++...+. .++|+||++
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~~v~e~~~ 81 (283)
T cd05118 4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGD--LYLVFEFMD 81 (283)
T ss_pred ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCC--EEEEEeccC
Confidence 46799999999999997 5788999999865432 235678899999999999999999999987776 999999998
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+ +|.+++
T Consensus 82 ~-~l~~~l 88 (283)
T cd05118 82 T-DLYKLI 88 (283)
T ss_pred C-CHHHHH
Confidence 6 777654
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.9e-08 Score=83.06 Aligned_cols=104 Identities=25% Similarity=0.277 Sum_probs=55.9
Q ss_pred EEEcCCCcCCCCC--cccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCC
Q 048796 33 ILDLSRNMISGDI--SDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSS 110 (555)
Q Consensus 33 ~L~L~~N~l~~~~--~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 110 (555)
.|+|++|.|-.+. ........+|+..+|++|.+....+.....++.++.|+|++|.|+ .+|..+..++.|+.|+++.
T Consensus 31 ~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~ 109 (177)
T KOG4579|consen 31 FLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRF 109 (177)
T ss_pred hcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhccccc
Confidence 4555555554222 111222234666666666665332222333445666666666666 4555566666666666666
Q ss_pred CcCCCCCchhhhCCCCCCeEEccCCccc
Q 048796 111 NQLKGPIPDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 111 N~l~~~~~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
|.+. ..|..+..+.+|-.|+..+|.+.
T Consensus 110 N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 110 NPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred Cccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 6665 45555555666666666665544
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.33 E-value=7.6e-07 Score=99.87 Aligned_cols=129 Identities=21% Similarity=0.256 Sum_probs=105.4
Q ss_pred CCCCCCEEECCCCcCCCCCCCC--CCCCCEEEcCCCc--CCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccE
Q 048796 6 NSTTLSVLNLSSNSLSGTLPTS--LKSCVILDLSRNM--ISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLST 81 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~~--l~~L~~L~L~~N~--l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 81 (555)
+....+.+.+-+|.+. .++.. -++|+.|-+..|. +..+..+.|..++.|..|||++|.=-+.+|..++.+-+|++
T Consensus 521 ~~~~~rr~s~~~~~~~-~~~~~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIE-HIAGSSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred chhheeEEEEeccchh-hccCCCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 3456677788888776 33332 3478899998886 66666777899999999999998866789999999999999
Q ss_pred EEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCc
Q 048796 82 FNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNG 136 (555)
Q Consensus 82 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~ 136 (555)
|+|++..+. .+|..+..+.+|.+|++..+.-...++.....+.+|++|.+..-.
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 999999998 889999999999999999887665667777779999999886654
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.32 E-value=9.1e-08 Score=106.11 Aligned_cols=84 Identities=27% Similarity=0.444 Sum_probs=71.3
Q ss_pred cCCeeecCCceEEEEEEe-CCCCEEEEEEecc--CChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 469 PAEVLGRSSHGTLYKATL-DSGHMLTVKWLRV--GLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 469 ~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~--~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+..||.|.||.||-|.. .+|...|||-+.- ......+...+|+.++..++|||+|+.+|+-...+. .+|.||||
T Consensus 1239 rg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRek--v~IFMEyC 1316 (1509)
T KOG4645|consen 1239 RGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREK--VYIFMEYC 1316 (1509)
T ss_pred cccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHH--HHHHHHHh
Confidence 378999999999999996 6899999997743 333345678899999999999999999998766555 89999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 1317 ~~GsLa~ll 1325 (1509)
T KOG4645|consen 1317 EGGSLASLL 1325 (1509)
T ss_pred ccCcHHHHH
Confidence 999999875
|
|
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.2e-06 Score=91.13 Aligned_cols=77 Identities=18% Similarity=0.199 Sum_probs=63.5
Q ss_pred CCeeecCCceEEEEEEe---CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL---DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~---~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
...||+|+||.||++.. ..+..||||.+... +.+.+|+.+++.++||||+++++++..... .+++|||+.
T Consensus 97 ~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~ 169 (392)
T PHA03207 97 LSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKST--VCMVMPKYK 169 (392)
T ss_pred EEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCE--EEEEehhcC
Confidence 67899999999999975 34678999987543 235689999999999999999999887666 999999996
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
|+|.+++
T Consensus 170 -~~l~~~l 176 (392)
T PHA03207 170 -CDLFTYV 176 (392)
T ss_pred -CCHHHHH
Confidence 5777664
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.9e-07 Score=100.65 Aligned_cols=63 Identities=22% Similarity=0.371 Sum_probs=53.0
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP 533 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~ 533 (555)
.+||+|+||.|||++. -||+.||||++.... ...-....+|+..+++++|||||+++..+...
T Consensus 485 ~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs 549 (1351)
T KOG1035|consen 485 ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVES 549 (1351)
T ss_pred HHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhcc
Confidence 4799999999999997 499999999997653 22346688999999999999999999877543
|
|
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.7e-06 Score=88.17 Aligned_cols=84 Identities=21% Similarity=0.329 Sum_probs=65.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 542 (555)
.+.||+|+||.||+|.. .+|..||+|++.... ....+.+.+|+.++.+++||||+++++++..... ...++++
T Consensus 22 ~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 101 (345)
T cd07877 22 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 101 (345)
T ss_pred EEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEe
Confidence 56799999999999986 678999999986532 2235678899999999999999999998854321 1267788
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
+++ +|+|.+++
T Consensus 102 ~~~-~~~L~~~~ 112 (345)
T cd07877 102 HLM-GADLNNIV 112 (345)
T ss_pred hhc-ccCHHHHH
Confidence 876 77887654
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.1e-06 Score=80.92 Aligned_cols=81 Identities=16% Similarity=0.381 Sum_probs=64.5
Q ss_pred CeeecCCceEEEEEEeCCCCEEEEEEeccCCh--------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV--------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~--------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
+.||+|++|.||+|.+ .|..++||....... .....+.+|+.++..++|+++.....++...+. .+++|
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~--~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPEN--FIIVM 78 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCC--CEEEE
Confidence 4799999999999998 678899997643221 113468899999999999998877777665555 89999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||++|++|.+++
T Consensus 79 e~~~G~~L~~~~ 90 (211)
T PRK14879 79 EYIEGEPLKDLI 90 (211)
T ss_pred EEeCCcCHHHHH
Confidence 999999998765
|
|
| >COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.3e-07 Score=86.49 Aligned_cols=194 Identities=24% Similarity=0.222 Sum_probs=125.2
Q ss_pred CCCccEEEccCCcCCCC----CCccccCCCCccEEEeeCCcCC---CCCc-------hhccCCCCccEEEcCCCcCCCCC
Q 048796 52 EANLEILDLSSNKLSGS----LPNLTSQFDRLSTFNIRNNSVT---GTLP-------SLLEISPRLVTLDVSSNQLKGPI 117 (555)
Q Consensus 52 ~~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~---~~~~-------~~l~~l~~L~~L~L~~N~l~~~~ 117 (555)
+..+..++||+|.|... +...+++-.+|+..++++--.. ..++ ..+..|++|+..+|+.|.|....
T Consensus 29 ~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~~ 108 (388)
T COG5238 29 MDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSEF 108 (388)
T ss_pred hcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCccc
Confidence 45677777777777632 3344455667777777654322 1122 34567899999999999998666
Q ss_pred chh----hhCCCCCCeEEccCCcccccCCcCcc----ccccccccCCCCCcCEEEccCCcCCCcCCc----cccCccccc
Q 048796 118 PDN----FFSSMALTNLNLSGNGFSGAIPLRSS----HASELLVLPSYPPMESLDLSGNALTGVLPS----DIGNMGRLR 185 (555)
Q Consensus 118 ~~~----~~~~~~L~~L~Ls~N~l~~~~p~~~~----~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~ 185 (555)
|+. +.....|.+|.|++|.+.-.....++ ++.......+-|.|+++....|++..-... .+.....|+
T Consensus 109 ~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh~~lk 188 (388)
T COG5238 109 PEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESHENLK 188 (388)
T ss_pred chHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhhcCce
Confidence 654 45677899999999987522212222 222223344568999999999998632211 123346789
Q ss_pred eeecccccccCCCc-----hhccCCCCCCEEeCCCCcCCCCCChhhh------cCCCEEEeccCCCCCCcC
Q 048796 186 LLNLANNHLSGKMP-----SELSKLGALEYLDLSGNQFKGEIPDKLS------LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 186 ~L~L~~N~l~~~~~-----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~------~~L~~L~ls~N~l~~~~p 245 (555)
.+.+..|.|.-..- ..+..+.+|+.|||+.|-|+-.....+. +.|+.|.+..|-++...-
T Consensus 189 ~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~ 259 (388)
T COG5238 189 EVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGV 259 (388)
T ss_pred eEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccH
Confidence 99999998863211 1234568999999999999854333332 347888888888875543
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.3e-07 Score=91.18 Aligned_cols=84 Identities=21% Similarity=0.323 Sum_probs=72.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
-++||+|+||.||.|+. .+|++||.|++.... +++.....+|-.++.++..+-||.+-..|.+.+. +++|+..|
T Consensus 190 ~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~--LClVLtlM 267 (591)
T KOG0986|consen 190 YRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA--LCLVLTLM 267 (591)
T ss_pred eEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc--eEEEEEee
Confidence 56999999999999997 689999999985432 2334557888899999999999999988998888 99999999
Q ss_pred CCCChhhhhC
Q 048796 546 QGDSLALHLY 555 (555)
Q Consensus 546 ~~GsL~~~l~ 555 (555)
.||+|.-+|+
T Consensus 268 NGGDLkfHiy 277 (591)
T KOG0986|consen 268 NGGDLKFHIY 277 (591)
T ss_pred cCCceeEEee
Confidence 9999998875
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.9e-06 Score=80.43 Aligned_cols=80 Identities=14% Similarity=0.261 Sum_probs=60.8
Q ss_pred eeecCCceEEEEEEeCCCCEEEEEEeccCCh--------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 472 VLGRSSHGTLYKATLDSGHMLTVKWLRVGLV--------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 472 ~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~--------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
+||+|+||.||+|.+ +|..+++|....... ...+.+.+|+.++..++|+++.....++...+. .++|||
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~--~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDN--KTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC--CEEEEE
Confidence 489999999999997 678899998643211 113567899999999998876555545554454 789999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|++|++|.+++
T Consensus 78 ~~~g~~l~~~~ 88 (199)
T TIGR03724 78 YIEGKPLKDVI 88 (199)
T ss_pred EECCccHHHHH
Confidence 99999998764
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.5e-06 Score=86.88 Aligned_cols=83 Identities=20% Similarity=0.277 Sum_probs=65.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|..||||++.... ....+.+.+|+.+++.++|+||+++++++..... .+.++|+
T Consensus 20 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 99 (342)
T cd07879 20 LKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVM 99 (342)
T ss_pred EEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEe
Confidence 57899999999999996 578999999986432 2224568899999999999999999999865422 1368999
Q ss_pred eccCCCChhhh
Q 048796 543 DYIQGDSLALH 553 (555)
Q Consensus 543 e~~~~GsL~~~ 553 (555)
||+.. +|.++
T Consensus 100 e~~~~-~l~~~ 109 (342)
T cd07879 100 PYMQT-DLQKI 109 (342)
T ss_pred ccccc-CHHHH
Confidence 99975 66543
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.4e-06 Score=81.65 Aligned_cols=76 Identities=24% Similarity=0.461 Sum_probs=66.4
Q ss_pred CceEEEEEEeC-CCCEEEEEEeccCChhc-HHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCChhhhh
Q 048796 477 SHGTLYKATLD-SGHMLTVKWLRVGLVRH-KKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 477 ~~g~vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~GsL~~~l 554 (555)
+||.||+|+.. +|..+|+|.+....... .+.+.+|+..+++++|+||+++++++..... .++++||+++|+|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~--~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDK--LYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCE--EEEEEeCCCCCCHHHHH
Confidence 58999999984 58999999997655444 6889999999999999999999999987666 99999999999998875
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.7e-06 Score=86.53 Aligned_cols=83 Identities=22% Similarity=0.358 Sum_probs=64.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC------ceEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE------QERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~------~~~~l 540 (555)
.+.||+|+||.||+|+. .+++.+|||.+..... .....+.+|+.+++.++|+||+++++++..... ...++
T Consensus 13 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~l 92 (311)
T cd07866 13 LGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYM 92 (311)
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEE
Confidence 67899999999999997 5789999998854322 123567889999999999999999988754332 12699
Q ss_pred EEeccCCCChhhh
Q 048796 541 LADYIQGDSLALH 553 (555)
Q Consensus 541 v~e~~~~GsL~~~ 553 (555)
|+||+++ ++.+.
T Consensus 93 v~~~~~~-~l~~~ 104 (311)
T cd07866 93 VTPYMDH-DLSGL 104 (311)
T ss_pred EEecCCc-CHHHH
Confidence 9999986 56544
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.6e-06 Score=80.26 Aligned_cols=78 Identities=17% Similarity=0.328 Sum_probs=55.9
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChh--c-------HHHH-----------------HHHHHHHHcCCCCcc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVR--H-------KKEF-----------------AKEVKKIGSMRHPNI 523 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~--~-------~~~~-----------------~~ei~~l~~l~H~ni 523 (555)
...||+|+||.||+|..++|+.||||.++..... . ...| ..|+..+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3579999999999999888999999999653211 0 1122 348999999988876
Q ss_pred eeeeEEEEcCCCceEEEEEeccCCCChh
Q 048796 524 VPLRAYYWGPREQERLLLADYIQGDSLA 551 (555)
Q Consensus 524 v~l~g~~~~~~~~~~~lv~e~~~~GsL~ 551 (555)
.....+.. .. .++||||++++++.
T Consensus 82 ~~p~~~~~--~~--~~iVmE~i~g~~l~ 105 (190)
T cd05147 82 PCPEPILL--KS--HVLVMEFIGDDGWA 105 (190)
T ss_pred CCCcEEEe--cC--CEEEEEEeCCCCCc
Confidence 44333322 22 58999999998764
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.7e-08 Score=94.99 Aligned_cols=174 Identities=24% Similarity=0.225 Sum_probs=104.6
Q ss_pred CccEEEccCCcCCC-CCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCc-CCCC-CchhhhCCCCCCeE
Q 048796 54 NLEILDLSSNKLSG-SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ-LKGP-IPDNFFSSMALTNL 130 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~-~~~~~~~~~~L~~L 130 (555)
.|+.|||+.-.|+. .+-..+..+.+|+.|.|.++++...+...++...+|+.|+|+.+. |+.. ..-.+..+..|..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 57888888777762 233345667778888888888877777777777788888887643 3321 11234567778888
Q ss_pred EccCCcccccCCcC-ccccccccccCCCCCcCEEEccCCc--CCC-cCCccccCccccceeeccccc-ccCCCchhccCC
Q 048796 131 NLSGNGFSGAIPLR-SSHASELLVLPSYPPMESLDLSGNA--LTG-VLPSDIGNMGRLRLLNLANNH-LSGKMPSELSKL 205 (555)
Q Consensus 131 ~Ls~N~l~~~~p~~-~~~~~~l~~l~~~~~L~~L~Ls~N~--l~~-~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l 205 (555)
+|+++.+....... ..+. -++|+.|+|++.. +.. .+..-...+++|.+|||++|. |+...-..|-.+
T Consensus 266 NlsWc~l~~~~Vtv~V~hi--------se~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf 337 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHI--------SETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKF 337 (419)
T ss_pred CchHhhccchhhhHHHhhh--------chhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhc
Confidence 88887765432111 1111 1567777777754 111 111112456778888887764 333333445567
Q ss_pred CCCCEEeCCCCcCCCCCChhhh-----cCCCEEEecc
Q 048796 206 GALEYLDLSGNQFKGEIPDKLS-----LKLNEFNVSY 237 (555)
Q Consensus 206 ~~L~~L~Ls~N~l~~~~p~~~~-----~~L~~L~ls~ 237 (555)
+.|++|.++.|.. .+|..+. ++|.+||+.+
T Consensus 338 ~~L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~g 372 (419)
T KOG2120|consen 338 NYLQHLSLSRCYD--IIPETLLELNSKPSLVYLDVFG 372 (419)
T ss_pred chheeeehhhhcC--CChHHeeeeccCcceEEEEecc
Confidence 7788887777753 3444332 6677777654
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.3e-06 Score=89.26 Aligned_cols=81 Identities=22% Similarity=0.344 Sum_probs=68.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-C-----CcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-H-----PNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H-----~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.++||+|+||+|-||.. .+++.||||.++.... -..+-..|+.++..++ | -|+|++++|+.-.++ ++||+
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H--lciVf 267 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH--LCIVF 267 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc--eeeee
Confidence 67999999999999996 6799999999976433 2344567889998887 4 489999999998888 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
|.+.. +|+++|
T Consensus 268 ELL~~-NLYell 278 (586)
T KOG0667|consen 268 ELLST-NLYELL 278 (586)
T ss_pred hhhhh-hHHHHH
Confidence 99987 899887
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.22 E-value=4e-07 Score=84.68 Aligned_cols=90 Identities=23% Similarity=0.349 Sum_probs=72.6
Q ss_pred cccCHHHHhcccCCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHH-HHHcCCCCcceeeeEEEEcCC
Q 048796 458 LAFTAEELSRAPAEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVK-KIGSMRHPNIVPLRAYYWGPR 534 (555)
Q Consensus 458 ~~~~~~~l~~~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~-~l~~l~H~niv~l~g~~~~~~ 534 (555)
..|+.++|+. ...||.|+||+|+|-.. +.|+..|||+++.... ...+.+..|.+ +|+.-+.||||+++|.+...+
T Consensus 59 ~~F~~~~Lqd--lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG 136 (361)
T KOG1006|consen 59 HTFTSDNLQD--LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG 136 (361)
T ss_pred cccccchHHH--HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC
Confidence 3477777766 66899999999999987 7899999999976543 45677888886 466678999999999988766
Q ss_pred CceEEEEEeccCCCChhh
Q 048796 535 EQERLLLADYIQGDSLAL 552 (555)
Q Consensus 535 ~~~~~lv~e~~~~GsL~~ 552 (555)
. .|+-||.|+- ||..
T Consensus 137 d--cWiCMELMd~-SlDk 151 (361)
T KOG1006|consen 137 D--CWICMELMDI-SLDK 151 (361)
T ss_pred c--eeeeHHHHhh-hHHH
Confidence 6 9999999975 5543
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.20 E-value=7.3e-07 Score=88.29 Aligned_cols=82 Identities=24% Similarity=0.362 Sum_probs=64.7
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCChh---c----HHHHHHHHHHHHcCCCCcceeeeEEEEc-CCCceEEEE
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR---H----KKEFAKEVKKIGSMRHPNIVPLRAYYWG-PREQERLLL 541 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~---~----~~~~~~ei~~l~~l~H~niv~l~g~~~~-~~~~~~~lv 541 (555)
++||+|+|+.|||+.. ...+.||||.-+....+ . .+-..+|-++-..++||.||++|.|+.- .+. .+-|
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds--FCTV 546 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS--FCTV 546 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc--ceee
Confidence 4799999999999985 56778999976432221 1 2335788899999999999999999854 344 7899
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
+|||+|-+|.-+|
T Consensus 547 LEYceGNDLDFYL 559 (775)
T KOG1151|consen 547 LEYCEGNDLDFYL 559 (775)
T ss_pred eeecCCCchhHHH
Confidence 9999999998776
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.20 E-value=6.9e-07 Score=83.30 Aligned_cols=83 Identities=22% Similarity=0.331 Sum_probs=70.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--------hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--------RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--------~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 539 (555)
.+++|.|..+.|.+|.. ++|..+|+|++..... .-.++-.+|+.+++++ .||+|+.+..+|+++.. .+
T Consensus 22 keilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF--~F 99 (411)
T KOG0599|consen 22 KEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAF--VF 99 (411)
T ss_pred HHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcch--hh
Confidence 67899999999999987 6899999999954221 1145567899999987 69999999999998887 99
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+|+|.|+.|.|+|+|
T Consensus 100 lVFdl~prGELFDyL 114 (411)
T KOG0599|consen 100 LVFDLMPRGELFDYL 114 (411)
T ss_pred hhhhhcccchHHHHh
Confidence 999999999999987
|
|
| >KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.8e-06 Score=76.15 Aligned_cols=84 Identities=27% Similarity=0.328 Sum_probs=42.4
Q ss_pred CccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCC
Q 048796 78 RLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSY 157 (555)
Q Consensus 78 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~ 157 (555)
+...++|++|.+... ..|..++.|.+|.|++|+|+..-|.--.-+++|..|.|.+|.|. .+.++..+..+
T Consensus 43 ~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~--------~l~dl~pLa~~ 112 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQ--------ELGDLDPLASC 112 (233)
T ss_pred ccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchh--------hhhhcchhccC
Confidence 344555555555422 23455555666666666665333332233445666666666554 12223333344
Q ss_pred CCcCEEEccCCcCC
Q 048796 158 PPMESLDLSGNALT 171 (555)
Q Consensus 158 ~~L~~L~Ls~N~l~ 171 (555)
|.|++|.+-+|.++
T Consensus 113 p~L~~Ltll~Npv~ 126 (233)
T KOG1644|consen 113 PKLEYLTLLGNPVE 126 (233)
T ss_pred CccceeeecCCchh
Confidence 66666666666665
|
|
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.2e-06 Score=90.71 Aligned_cols=85 Identities=22% Similarity=0.307 Sum_probs=68.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEe--cc--CChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWL--RV--GLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l--~~--~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+|-+||||.. .+|..||=-.+ +. ......+.|..|+++++.|+|+||++++.++.+......-+|.|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 66999999999999997 57877773222 11 223345789999999999999999999999987665557899999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
|..|+|..++
T Consensus 125 ~TSGtLr~Y~ 134 (632)
T KOG0584|consen 125 FTSGTLREYR 134 (632)
T ss_pred ccCCcHHHHH
Confidence 9999999875
|
|
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=4.6e-06 Score=88.80 Aligned_cols=82 Identities=15% Similarity=0.190 Sum_probs=60.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCC------CcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRH------PNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H------~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.++||+|+||.||+|+. ..++.||||+++.... ..+++..|+.++.+++| .+++.++.++..... ..++||
T Consensus 134 ~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~-~~~iv~ 211 (467)
T PTZ00284 134 LSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETG-HMCIVM 211 (467)
T ss_pred EEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCc-eEEEEE
Confidence 67899999999999987 5688999999864322 23455667777766655 458888888875432 388999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
|++ +|+|.+++
T Consensus 212 ~~~-g~~l~~~l 222 (467)
T PTZ00284 212 PKY-GPCLLDWI 222 (467)
T ss_pred ecc-CCCHHHHH
Confidence 988 66787765
|
|
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.19 E-value=5.3e-06 Score=81.88 Aligned_cols=84 Identities=30% Similarity=0.409 Sum_probs=63.8
Q ss_pred CCeeecCCceEEEEEEeC-CCCEEEEEEeccCCh--hcHHHHHHHHHHHHcC---CCCcceeeeEEEEcCCC---ceEEE
Q 048796 470 AEVLGRSSHGTLYKATLD-SGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSM---RHPNIVPLRAYYWGPRE---QERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l---~H~niv~l~g~~~~~~~---~~~~l 540 (555)
.+.||+|+||.||+|+.. ++..+|+|++..... .....+.+|+.++.++ +|+||+++++++...+. ...++
T Consensus 4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l 83 (287)
T cd07838 4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTL 83 (287)
T ss_pred EEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEE
Confidence 468999999999999984 589999999964322 2235567787776655 69999999999876432 12789
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
+|||+.+ +|.+++
T Consensus 84 ~~e~~~~-~l~~~l 96 (287)
T cd07838 84 VFEHVDQ-DLATYL 96 (287)
T ss_pred Eehhccc-CHHHHH
Confidence 9999975 787654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.3e-06 Score=80.29 Aligned_cols=72 Identities=21% Similarity=0.226 Sum_probs=59.5
Q ss_pred CCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCChhhhh
Q 048796 476 SSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 476 G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~GsL~~~l 554 (555)
|.||.||+++. .+++.+|+|++.... .+.+|...+....||||+++++++...+. .++|+||+++|+|.+++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~lv~e~~~~~~L~~~l 76 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDS--VFLVLQHAEGGKLWSHI 76 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCe--EEEEEecCCCCCHHHHH
Confidence 78999999997 678999999986542 23455556666779999999999987766 99999999999998875
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.7e-06 Score=86.73 Aligned_cols=84 Identities=20% Similarity=0.284 Sum_probs=66.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 542 (555)
...||+|+||.||+|+. .++..||||++... .....+.+.+|+.++++++|+||+++.+++...+. ...++|+
T Consensus 20 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 99 (343)
T cd07851 20 LSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVT 99 (343)
T ss_pred EEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEE
Confidence 67899999999999997 56889999988643 22234667889999999999999999887654321 1379999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+ +++|.+++
T Consensus 100 e~~-~~~L~~~~ 110 (343)
T cd07851 100 HLM-GADLNNIV 110 (343)
T ss_pred ecC-CCCHHHHH
Confidence 998 56888765
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=6.6e-06 Score=77.51 Aligned_cols=83 Identities=13% Similarity=0.213 Sum_probs=64.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHH---------HHHHHHHHHHcCCCCcceeeeEEEEcCCC-----
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKK---------EFAKEVKKIGSMRHPNIVPLRAYYWGPRE----- 535 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~---------~~~~ei~~l~~l~H~niv~l~g~~~~~~~----- 535 (555)
.+++|.|+||.||.... ++..+|||.++........ .|.+|+..+.+++|++|.....++.....
T Consensus 36 ~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~ 114 (232)
T PRK10359 36 IKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRY 114 (232)
T ss_pred EEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccc
Confidence 56899999999999665 6778999999654332222 26899999999999999999888654321
Q ss_pred -ceEEEEEeccCCCChhhh
Q 048796 536 -QERLLLADYIQGDSLALH 553 (555)
Q Consensus 536 -~~~~lv~e~~~~GsL~~~ 553 (555)
...+++|||++|.+|.++
T Consensus 115 ~~~~~lvmEyi~G~tL~~~ 133 (232)
T PRK10359 115 AHTYIMLIEYIEGVELNDM 133 (232)
T ss_pred cCCeEEEEEEECCccHHHh
Confidence 127899999999999765
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.1e-05 Score=74.67 Aligned_cols=77 Identities=14% Similarity=0.244 Sum_probs=57.1
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChh---------------------c-----HHHHHHHHHHHHcCCCCcc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVR---------------------H-----KKEFAKEVKKIGSMRHPNI 523 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~---------------------~-----~~~~~~ei~~l~~l~H~ni 523 (555)
...||+|+||+||+|+..+|+.||||.++..... . ...+..|...+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3579999999999999878999999998654210 0 1224578899999999987
Q ss_pred eeeeEEEEcCCCceEEEEEeccCCCCh
Q 048796 524 VPLRAYYWGPREQERLLLADYIQGDSL 550 (555)
Q Consensus 524 v~l~g~~~~~~~~~~~lv~e~~~~GsL 550 (555)
.....+... . .++||||++++++
T Consensus 82 ~~p~~~~~~--~--~~lVmE~~~g~~~ 104 (190)
T cd05145 82 PVPEPILLK--K--NVLVMEFIGDDGS 104 (190)
T ss_pred CCceEEEec--C--CEEEEEEecCCCc
Confidence 554444332 2 5899999998854
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.6e-06 Score=90.24 Aligned_cols=82 Identities=12% Similarity=0.207 Sum_probs=59.0
Q ss_pred CCeeecCCceEEEEEEeC--CCCEEEEEEec-----------------cCChhcHHHHHHHHHHHHcCCCCcceeeeEEE
Q 048796 470 AEVLGRSSHGTLYKATLD--SGHMLTVKWLR-----------------VGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYY 530 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~--~g~~vavK~l~-----------------~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~ 530 (555)
.+.||+|+||.||+|.+. .+...++|.+. .........+.+|+.++++++|||||++++++
T Consensus 153 i~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~ 232 (501)
T PHA03210 153 IDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILKIEEIL 232 (501)
T ss_pred EeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCcEeEEE
Confidence 678999999999998762 22223322110 01112245688999999999999999999999
Q ss_pred EcCCCceEEEEEeccCCCChhhhh
Q 048796 531 WGPREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 531 ~~~~~~~~~lv~e~~~~GsL~~~l 554 (555)
...+. .|+|+|++.+ +|.+++
T Consensus 233 ~~~~~--~~lv~e~~~~-~l~~~l 253 (501)
T PHA03210 233 RSEAN--TYMITQKYDF-DLYSFM 253 (501)
T ss_pred EECCe--eEEEEecccc-CHHHHH
Confidence 88777 8999998864 565543
|
|
| >KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.09 E-value=6.4e-08 Score=91.21 Aligned_cols=206 Identities=24% Similarity=0.269 Sum_probs=112.7
Q ss_pred CEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCC-CCccccCC-CCccEEEeeCCcCCC-CCchhccCCCCccEEEc
Q 048796 32 VILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGS-LPNLTSQF-DRLSTFNIRNNSVTG-TLPSLLEISPRLVTLDV 108 (555)
Q Consensus 32 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~-~~~~~~~l-~~L~~L~L~~N~l~~-~~~~~l~~l~~L~~L~L 108 (555)
+.||+.+-.|.....+.... .....+.+..-.+... +.+.+.-+ ..|++|||++..|+. .....+..+.+|+.|.|
T Consensus 139 ~~lDl~~r~i~p~~l~~l~~-rgV~v~Rlar~~~~~prlae~~~~frsRlq~lDLS~s~it~stl~~iLs~C~kLk~lSl 217 (419)
T KOG2120|consen 139 QTLDLTGRNIHPDVLGRLLS-RGVIVFRLARSFMDQPRLAEHFSPFRSRLQHLDLSNSVITVSTLHGILSQCSKLKNLSL 217 (419)
T ss_pred eeeccCCCccChhHHHHHHh-CCeEEEEcchhhhcCchhhhhhhhhhhhhHHhhcchhheeHHHHHHHHHHHHhhhhccc
Confidence 35677666665322111111 1355555553333321 12222222 357888888877762 23345667778888888
Q ss_pred CCCcCCCCCchhhhCCCCCCeEEccCCc-ccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccc-cC-ccccc
Q 048796 109 SSNQLKGPIPDNFFSSMALTNLNLSGNG-FSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDI-GN-MGRLR 185 (555)
Q Consensus 109 ~~N~l~~~~~~~~~~~~~L~~L~Ls~N~-l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~-~~-l~~L~ 185 (555)
.++++...+...+....+|+.|+|+.+. ++ ..+.. ..+.+++.|..|+|+++.++......+ .. -++|+
T Consensus 218 Eg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t---~n~~~-----ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~l~ 289 (419)
T KOG2120|consen 218 EGLRLDDPIVNTIAKNSNLVRLNLSMCSGFT---ENALQ-----LLLSSCSRLDELNLSWCFLFTEKVTVAVAHISETLT 289 (419)
T ss_pred cccccCcHHHHHHhccccceeeccccccccc---hhHHH-----HHHHhhhhHhhcCchHhhccchhhhHHHhhhchhhh
Confidence 8888877777777778888888887653 22 11111 123455777888888887664332211 11 14677
Q ss_pred eeeccccccc---CCCchhccCCCCCCEEeCCCCc-CCCCCChhhh--cCCCEEEeccCCCCCCcCccc
Q 048796 186 LLNLANNHLS---GKMPSELSKLGALEYLDLSGNQ-FKGEIPDKLS--LKLNEFNVSYNDLSGPIPENL 248 (555)
Q Consensus 186 ~L~L~~N~l~---~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l 248 (555)
.|+|++..-. ..+..-...+++|..|||++|. |+...-..+. +.|++|.++.++. .+|..+
T Consensus 290 ~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~--i~p~~~ 356 (419)
T KOG2120|consen 290 QLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYD--IIPETL 356 (419)
T ss_pred hhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehhhhcC--CChHHe
Confidence 7887765421 1122223467888888888764 4432222222 5677777766543 455543
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=98.08 E-value=1e-05 Score=81.98 Aligned_cols=84 Identities=18% Similarity=0.165 Sum_probs=63.8
Q ss_pred CCeeecCCceEEEEEEe-CC--CCEEEEEEeccCC--hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcC--CCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DS--GHMLTVKWLRVGL--VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGP--REQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~--g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~--~~~~~~lv 541 (555)
.+.||+|+||.||+++. .. +..+|+|++.... ....+.+.+|+.++.++ .||||+++++++... .....+++
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 84 (332)
T cd07857 5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLY 84 (332)
T ss_pred EEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEE
Confidence 56899999999999997 34 7889999986432 22356788999999999 599999999875432 11237888
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
+||+. ++|.+++
T Consensus 85 ~e~~~-~~L~~~l 96 (332)
T cd07857 85 EELME-ADLHQII 96 (332)
T ss_pred Eeccc-CCHHHHH
Confidence 99887 5787764
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.3e-05 Score=86.65 Aligned_cols=82 Identities=17% Similarity=0.245 Sum_probs=62.4
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEe-ccC-C------hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWL-RVG-L------VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l-~~~-~------~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|.+... .+++|+. ... . ....+.+.+|+.++..++|++++....++..... .++|
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~--~~lv 414 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE--KTIV 414 (535)
T ss_pred cceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC--CEEE
Confidence 67899999999999998433 3444432 111 1 1123568899999999999999988777776555 7999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++++|.+++
T Consensus 415 ~E~~~g~~L~~~l 427 (535)
T PRK09605 415 MEYIGGKDLKDVL 427 (535)
T ss_pred EEecCCCcHHHHH
Confidence 9999999998875
|
|
| >KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.07 E-value=7e-06 Score=73.59 Aligned_cols=105 Identities=28% Similarity=0.276 Sum_probs=80.9
Q ss_pred CEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCC
Q 048796 32 VILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSN 111 (555)
Q Consensus 32 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 111 (555)
+.++|.+.++..+. .+..+..+...+||++|.+.. + +.|..++.|.+|.|++|+|+.+-|..-..+++|+.|.|.+|
T Consensus 22 ~e~~LR~lkip~ie-nlg~~~d~~d~iDLtdNdl~~-l-~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnN 98 (233)
T KOG1644|consen 22 RELDLRGLKIPVIE-NLGATLDQFDAIDLTDNDLRK-L-DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNN 98 (233)
T ss_pred cccccccccccchh-hccccccccceecccccchhh-c-ccCCCccccceEEecCCcceeeccchhhhccccceEEecCc
Confidence 46788888776433 345556678999999999872 2 34678899999999999999777777777889999999999
Q ss_pred cCCCCC-chhhhCCCCCCeEEccCCcccc
Q 048796 112 QLKGPI-PDNFFSSMALTNLNLSGNGFSG 139 (555)
Q Consensus 112 ~l~~~~-~~~~~~~~~L~~L~Ls~N~l~~ 139 (555)
.|.... -..+..++.|++|.+-+|....
T Consensus 99 si~~l~dl~pLa~~p~L~~Ltll~Npv~~ 127 (233)
T KOG1644|consen 99 SIQELGDLDPLASCPKLEYLTLLGNPVEH 127 (233)
T ss_pred chhhhhhcchhccCCccceeeecCCchhc
Confidence 986321 1245678899999999998763
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.05 E-value=7.1e-07 Score=83.13 Aligned_cols=91 Identities=24% Similarity=0.380 Sum_probs=73.8
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEeCCCCEEEEEEecc--CChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCce
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRV--GLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQE 537 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~--~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~ 537 (555)
+++.+|.. ...|.+...|..|+|+| .|..+++|.+.. ......++|..|...++-+.||||++++|.|..+..
T Consensus 187 id~~~lnl--~tkl~e~hsgelwrgrw-qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppn-- 261 (448)
T KOG0195|consen 187 IDVSSLNL--ITKLAESHSGELWRGRW-QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPN-- 261 (448)
T ss_pred cchhhhhh--hhhhccCCCcccccccc-cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCC--
Confidence 33444433 44688888999999999 566677777743 334446789999999999999999999999998877
Q ss_pred EEEEEeccCCCChhhhhC
Q 048796 538 RLLLADYIQGDSLALHLY 555 (555)
Q Consensus 538 ~~lv~e~~~~GsL~~~l~ 555 (555)
+.+|..||+.|+|+..||
T Consensus 262 lv~isq~mp~gslynvlh 279 (448)
T KOG0195|consen 262 LVIISQYMPFGSLYNVLH 279 (448)
T ss_pred ceEeeeeccchHHHHHHh
Confidence 999999999999999887
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.01 E-value=4.4e-06 Score=93.83 Aligned_cols=127 Identities=23% Similarity=0.199 Sum_probs=67.7
Q ss_pred CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCc--CCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEE
Q 048796 30 SCVILDLSRNMISGDISDMQNWEANLEILDLSSNK--LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLD 107 (555)
Q Consensus 30 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~--l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 107 (555)
..+...+-+|.+....... .. ++|..|-+..|. +.......|..++.|+.|||++|.=.+.+|..++.+-+|++|+
T Consensus 524 ~~rr~s~~~~~~~~~~~~~-~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 524 SVRRMSLMNNKIEHIAGSS-EN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLD 601 (889)
T ss_pred heeEEEEeccchhhccCCC-CC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccc
Confidence 4455555555554332211 11 246666666664 3333334455566666666666554445666666666666666
Q ss_pred cCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCC
Q 048796 108 VSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGN 168 (555)
Q Consensus 108 L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N 168 (555)
|+...+. .+|..+.++..|.+|++..+.-...+|.....+ ++|++|.+...
T Consensus 602 L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L---------~~Lr~L~l~~s 652 (889)
T KOG4658|consen 602 LSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLEL---------QSLRVLRLPRS 652 (889)
T ss_pred ccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhc---------ccccEEEeecc
Confidence 6666665 556666666666666666554433333333223 55555555443
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.6e-05 Score=78.08 Aligned_cols=84 Identities=14% Similarity=0.147 Sum_probs=64.3
Q ss_pred CCeeecCCceEEEEEEeCC------CCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLDS------GHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~------g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
..++-+|.||.||+|.|.+ -+.|-||.++.... -....|..|--.+..+.|||+.+..+.+..... ..+++|
T Consensus 289 ~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~-~P~V~y 367 (563)
T KOG1024|consen 289 SCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA-TPFVLY 367 (563)
T ss_pred hhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC-cceEEE
Confidence 4578899999999998732 23455666644322 234568888888999999999999999976433 489999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
.++.-|+|..+|
T Consensus 368 ~~~~~gNLK~FL 379 (563)
T KOG1024|consen 368 PATGVGNLKSFL 379 (563)
T ss_pred eccCcchHHHHH
Confidence 999999999876
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.93 E-value=1.7e-05 Score=81.23 Aligned_cols=82 Identities=12% Similarity=0.185 Sum_probs=69.8
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEecc--CChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRV--GLVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~--~~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+||.++||++...+.+.||+|++.. ...+....|.+||..+.+++ |.+||+|+.|-..++. +|+||||=+
T Consensus 366 lk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~--lYmvmE~Gd 443 (677)
T KOG0596|consen 366 LKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGY--LYMVMECGD 443 (677)
T ss_pred HHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCce--EEEEeeccc
Confidence 678999999999999987778899988743 34455788999999999995 9999999999888777 999999766
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
- +|.++|
T Consensus 444 ~-DL~kiL 450 (677)
T KOG0596|consen 444 I-DLNKIL 450 (677)
T ss_pred c-cHHHHH
Confidence 5 777766
|
|
| >PRK15386 type III secretion protein GogB; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=6.9e-05 Score=75.98 Aligned_cols=132 Identities=17% Similarity=0.279 Sum_probs=62.4
Q ss_pred CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC-cCCCCCchhccCCCCccEEE
Q 048796 29 KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN-SVTGTLPSLLEISPRLVTLD 107 (555)
Q Consensus 29 ~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~l~~l~~L~~L~ 107 (555)
.+++.|++++|.|+.++ ....+|+.|+++++.--..+|..+ ..+|+.|++++| .+. .+| .+|+.|+
T Consensus 52 ~~l~~L~Is~c~L~sLP----~LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~-sLP------~sLe~L~ 118 (426)
T PRK15386 52 RASGRLYIKDCDIESLP----VLPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEIS-GLP------ESVRSLE 118 (426)
T ss_pred cCCCEEEeCCCCCcccC----CCCCCCcEEEccCCCCcccCCchh--hhhhhheEccCccccc-ccc------cccceEE
Confidence 34555555555555443 122245666665533222444333 235666666665 333 222 2355555
Q ss_pred cCCCcCC--CCCchhhhCCCCCCeEEccCCccc--ccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccc
Q 048796 108 VSSNQLK--GPIPDNFFSSMALTNLNLSGNGFS--GAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGR 183 (555)
Q Consensus 108 L~~N~l~--~~~~~~~~~~~~L~~L~Ls~N~l~--~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 183 (555)
+..|... +.+|. +|+.|.+.+++.. ..+|.. ++ ++|++|++++|... ..|..+. .+
T Consensus 119 L~~n~~~~L~~LPs------sLk~L~I~~~n~~~~~~lp~~---------LP--sSLk~L~Is~c~~i-~LP~~LP--~S 178 (426)
T PRK15386 119 IKGSATDSIKNVPN------GLTSLSINSYNPENQARIDNL---------IS--PSLKTLSLTGCSNI-ILPEKLP--ES 178 (426)
T ss_pred eCCCCCcccccCcc------hHhheeccccccccccccccc---------cC--CcccEEEecCCCcc-cCccccc--cc
Confidence 5554432 12222 4555555432211 000100 01 56788888777755 3343333 47
Q ss_pred cceeeccccc
Q 048796 184 LRLLNLANNH 193 (555)
Q Consensus 184 L~~L~L~~N~ 193 (555)
|+.|+++.|.
T Consensus 179 Lk~L~ls~n~ 188 (426)
T PRK15386 179 LQSITLHIEQ 188 (426)
T ss_pred CcEEEecccc
Confidence 8888887663
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.90 E-value=1e-05 Score=83.80 Aligned_cols=83 Identities=18% Similarity=0.233 Sum_probs=68.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh---cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR---HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
...||-|+||.|+.+.- .+...||.|.+++..-- ...-...|-.+|+..+.+.||+|+..+.+.+. +|+||||+
T Consensus 634 ik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdn--LYFVMdYI 711 (1034)
T KOG0608|consen 634 IKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDN--LYFVMDYI 711 (1034)
T ss_pred EeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCc--eEEEEecc
Confidence 34699999999999985 56777999998654322 12335678899999999999999999998887 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+||++-.+|
T Consensus 712 PGGDmMSLL 720 (1034)
T KOG0608|consen 712 PGGDMMSLL 720 (1034)
T ss_pred CCccHHHHH
Confidence 999998776
|
|
| >PRK15386 type III secretion protein GogB; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=7.1e-05 Score=75.88 Aligned_cols=71 Identities=23% Similarity=0.357 Sum_probs=38.5
Q ss_pred CCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCC-cCCCCCchhhhCCCCCCeEE
Q 048796 53 ANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSN-QLKGPIPDNFFSSMALTNLN 131 (555)
Q Consensus 53 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~~~~L~~L~ 131 (555)
.+++.|++++|.|+ .+|. -..+|++|.++++.--..+|..+ .++|+.|++++| .+. .+|. .|+.|+
T Consensus 52 ~~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~-sLP~------sLe~L~ 118 (426)
T PRK15386 52 RASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEIS-GLPE------SVRSLE 118 (426)
T ss_pred cCCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCccccc-cccc------ccceEE
Confidence 56777777777666 4442 12347777776643222444433 246677777666 443 3332 355555
Q ss_pred ccCCc
Q 048796 132 LSGNG 136 (555)
Q Consensus 132 Ls~N~ 136 (555)
+..|.
T Consensus 119 L~~n~ 123 (426)
T PRK15386 119 IKGSA 123 (426)
T ss_pred eCCCC
Confidence 55444
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.85 E-value=1.5e-05 Score=81.96 Aligned_cols=83 Identities=16% Similarity=0.198 Sum_probs=64.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh--------cHHHHHHHHHHHHcCC---CCcceeeeEEEEcCCCce
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR--------HKKEFAKEVKKIGSMR---HPNIVPLRAYYWGPREQE 537 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~--------~~~~~~~ei~~l~~l~---H~niv~l~g~~~~~~~~~ 537 (555)
-..+|+|+||+|+.|.+ .+...|.||.+.+...- .....-.||.+|..++ |+||++++.++++++.
T Consensus 566 lq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~-- 643 (772)
T KOG1152|consen 566 LQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDY-- 643 (772)
T ss_pred eeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCe--
Confidence 56799999999999998 45677899988543221 1123457999999998 9999999999999888
Q ss_pred EEEEEeccC-CCChhhhh
Q 048796 538 RLLLADYIQ-GDSLALHL 554 (555)
Q Consensus 538 ~~lv~e~~~-~GsL~~~l 554 (555)
.||++|-.- +-+|+++|
T Consensus 644 yyl~te~hg~gIDLFd~I 661 (772)
T KOG1152|consen 644 YYLETEVHGEGIDLFDFI 661 (772)
T ss_pred eEEEecCCCCCcchhhhh
Confidence 899998543 33666654
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.83 E-value=4e-07 Score=83.94 Aligned_cols=84 Identities=20% Similarity=0.279 Sum_probs=65.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEecc--CChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC------CceEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRV--GLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR------EQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~--~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~------~~~~~l 540 (555)
...||+|.||.|++++. .+|+.||+|++-. +..+-...-.+|++++..++|+|++.++..|.... ....|+
T Consensus 22 ~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~yl 101 (376)
T KOG0669|consen 22 LAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYL 101 (376)
T ss_pred HHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeee
Confidence 45799999999999997 5688899987632 22233566789999999999999999999885432 113799
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
|++||+. +|+.+|
T Consensus 102 Vf~~ceh-DLaGlL 114 (376)
T KOG0669|consen 102 VFDFCEH-DLAGLL 114 (376)
T ss_pred eHHHhhh-hHHHHh
Confidence 9999998 676554
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=97.83 E-value=4.9e-05 Score=70.82 Aligned_cols=78 Identities=17% Similarity=0.236 Sum_probs=57.9
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh----------------------hcHHHHHHHHHHHHcCCCCc--cee
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV----------------------RHKKEFAKEVKKIGSMRHPN--IVP 525 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~----------------------~~~~~~~~ei~~l~~l~H~n--iv~ 525 (555)
.+.||+|+||.||++..++|+.+|||+++.... .....+..|+..+..+.|++ +.+
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~ 99 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPK 99 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCc
Confidence 678999999999999988899999998754221 01123677888899888874 334
Q ss_pred eeEEEEcCCCceEEEEEeccCCCChhhh
Q 048796 526 LRAYYWGPREQERLLLADYIQGDSLALH 553 (555)
Q Consensus 526 l~g~~~~~~~~~~~lv~e~~~~GsL~~~ 553 (555)
.++ ... .++||||+++++|.++
T Consensus 100 ~~~----~~~--~~lv~e~~~g~~L~~~ 121 (198)
T cd05144 100 PID----WNR--HAVVMEYIDGVELYRV 121 (198)
T ss_pred eee----cCC--ceEEEEEeCCcchhhc
Confidence 433 233 6899999999988654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=97.80 E-value=6.4e-06 Score=75.10 Aligned_cols=80 Identities=20% Similarity=0.372 Sum_probs=67.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.+|+|.|+.|+.|.. .+.+.++||.++.- ..+.+.+|+.++..++ ||||++|+....++......||+||+.+
T Consensus 43 vrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n 119 (338)
T KOG0668|consen 43 VRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNN 119 (338)
T ss_pred HHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhcc
Confidence 56899999999999985 67888999998753 3477899999999997 9999999999887765568999999999
Q ss_pred CChhh
Q 048796 548 DSLAL 552 (555)
Q Consensus 548 GsL~~ 552 (555)
-+...
T Consensus 120 ~Dfk~ 124 (338)
T KOG0668|consen 120 TDFKQ 124 (338)
T ss_pred ccHHH
Confidence 76543
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=97.73 E-value=2.6e-05 Score=52.94 Aligned_cols=35 Identities=43% Similarity=0.663 Sum_probs=14.3
Q ss_pred ccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCC
Q 048796 55 LEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVT 90 (555)
Q Consensus 55 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 90 (555)
|++|+|++|+|+ .+|..++++++|++|++++|+|+
T Consensus 3 L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 3 LEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp -SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred ceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 444444444444 23333444444444444444444
|
... |
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=97.70 E-value=3.3e-05 Score=52.41 Aligned_cols=36 Identities=47% Similarity=0.747 Sum_probs=16.0
Q ss_pred CcCEEEccCCcCCCcCCccccCccccceeeccccccc
Q 048796 159 PMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLS 195 (555)
Q Consensus 159 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 195 (555)
+|++|++++|+|+. +|..+..|++|+.|++++|+|+
T Consensus 2 ~L~~L~l~~N~i~~-l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQITD-LPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-SS-HGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCcc-cCchHhCCCCCCEEEecCCCCC
Confidence 34555555555553 2223444555555555555444
|
... |
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.66 E-value=2.5e-05 Score=83.63 Aligned_cols=78 Identities=19% Similarity=0.279 Sum_probs=60.9
Q ss_pred CCeeecCCce-EEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHG-TLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g-~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+++|.|+-| .||+|.+ +|+.||||++-.+.. .-..+||..++.- +|||||++++.-.+.. .+||..|.|.-
T Consensus 514 ~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~~---~~A~rEi~lL~eSD~H~NviRyyc~E~d~q--F~YIalELC~~ 587 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVY-EGREVAVKRLLEEFF---DFAQREIQLLQESDEHPNVIRYYCSEQDRQ--FLYIALELCAC 587 (903)
T ss_pred HHHcccCCCCcEEEEEee-CCceehHHHHhhHhH---HHHHHHHHHHHhccCCCceEEEEeeccCCc--eEEEEehHhhh
Confidence 6678888877 4899999 789999999865332 3456899988877 5999999876544444 49999999976
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
+|.+++
T Consensus 588 -sL~dli 593 (903)
T KOG1027|consen 588 -SLQDLI 593 (903)
T ss_pred -hHHHHH
Confidence 888775
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00011 Score=64.44 Aligned_cols=77 Identities=14% Similarity=0.100 Sum_probs=62.8
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCC--CcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRH--PNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H--~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.+|+|.++.||++... +..+++|....... ...+.+|+..+..++| ..+.+++++....+. .++++||+++
T Consensus 3 ~~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~--~~~v~e~~~g 77 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTK-DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGW--SYLLMEWIEG 77 (155)
T ss_pred ceecccccccceEEEEec-CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCc--cEEEEEecCC
Confidence 357999999999999984 47899998865433 5678999999999977 488888887766555 8999999999
Q ss_pred CChh
Q 048796 548 DSLA 551 (555)
Q Consensus 548 GsL~ 551 (555)
+.+.
T Consensus 78 ~~~~ 81 (155)
T cd05120 78 ETLD 81 (155)
T ss_pred eecc
Confidence 8775
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00011 Score=70.44 Aligned_cols=78 Identities=22% Similarity=0.344 Sum_probs=56.0
Q ss_pred CCeeecCCceEEEEEE--eCCCCEEEEEEeccCChh------------------------cHHHHHHHHHHHHcCCCCc-
Q 048796 470 AEVLGRSSHGTLYKAT--LDSGHMLTVKWLRVGLVR------------------------HKKEFAKEVKKIGSMRHPN- 522 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~--~~~g~~vavK~l~~~~~~------------------------~~~~~~~ei~~l~~l~H~n- 522 (555)
.+.||+|+||.||+|+ ..+|+.||||.++..... ....+..|+..+.++.|..
T Consensus 33 ~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i 112 (237)
T smart00090 33 GGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGV 112 (237)
T ss_pred CCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 6789999999999998 468999999988643210 0123568999999997633
Q ss_pred -ceeeeEEEEcCCCceEEEEEeccCCCChhhh
Q 048796 523 -IVPLRAYYWGPREQERLLLADYIQGDSLALH 553 (555)
Q Consensus 523 -iv~l~g~~~~~~~~~~~lv~e~~~~GsL~~~ 553 (555)
+.+.+++ .. .++||||+++++|...
T Consensus 113 ~~p~~~~~----~~--~~lV~E~~~g~~L~~~ 138 (237)
T smart00090 113 PVPKPIAW----RR--NVLVMEFIGGDGLPAP 138 (237)
T ss_pred CCCeeeEe----cC--ceEEEEEecCCccccc
Confidence 3333332 23 5899999999887543
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.64 E-value=3.9e-05 Score=71.98 Aligned_cols=85 Identities=19% Similarity=0.350 Sum_probs=67.5
Q ss_pred ccCHHHHhcccCCeeecCCceEEEEEEe-CCCCEEEEEEecc-CChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCC
Q 048796 459 AFTAEELSRAPAEVLGRSSHGTLYKATL-DSGHMLTVKWLRV-GLVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPRE 535 (555)
Q Consensus 459 ~~~~~~l~~~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~-~~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~ 535 (555)
.-+..||+. ...||+|+.|.|+++++ ..|..+|||.+.. +.....+.+...+.++...+ .|.||+.+||+.....
T Consensus 88 ~~dindl~~--l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d 165 (391)
T KOG0983|consen 88 QADINDLEN--LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD 165 (391)
T ss_pred ccChHHhhh--HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch
Confidence 356677766 66799999999999998 6789999999965 34444566777777777665 8999999999998766
Q ss_pred ceEEEEEeccCC
Q 048796 536 QERLLLADYIQG 547 (555)
Q Consensus 536 ~~~~lv~e~~~~ 547 (555)
+++.||.|..
T Consensus 166 --V~IcMelMs~ 175 (391)
T KOG0983|consen 166 --VFICMELMST 175 (391)
T ss_pred --HHHHHHHHHH
Confidence 8888888753
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=8.2e-05 Score=80.66 Aligned_cols=79 Identities=18% Similarity=0.126 Sum_probs=50.1
Q ss_pred CCeeecCCceEEEEEEe-CC----CCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEE------EEcCCCceE
Q 048796 470 AEVLGRSSHGTLYKATL-DS----GHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAY------YWGPREQER 538 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~----g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~------~~~~~~~~~ 538 (555)
.+.||+|+||.||+|++ .+ +..||||++..... .+.+..| .+....+.++..++.. +...+. .
T Consensus 137 ~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 210 (566)
T PLN03225 137 GKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDE--Y 210 (566)
T ss_pred eEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccccCCc--e
Confidence 78999999999999997 45 78999998864322 1222222 1222222222222211 122333 8
Q ss_pred EEEEeccCCCChhhhh
Q 048796 539 LLLADYIQGDSLALHL 554 (555)
Q Consensus 539 ~lv~e~~~~GsL~~~l 554 (555)
++||||+++|+|.+++
T Consensus 211 ~LV~ey~~~gsL~~~l 226 (566)
T PLN03225 211 WLVWRYEGESTLADLM 226 (566)
T ss_pred EEEEEecCCCcHHHHH
Confidence 9999999999998876
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.58 E-value=1e-05 Score=79.68 Aligned_cols=83 Identities=19% Similarity=0.360 Sum_probs=63.5
Q ss_pred CCeeecCCceEEEEEEeC-CCCEEEEEEeccCCh-hc--HHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD-SGHMLTVKWLRVGLV-RH--KKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~-~~--~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
..+||+|+||+|..++-+ +...+|||.++..-. |+ .+--+.|-++++-. +-|-++++..++.+-+. +|.||||
T Consensus 354 l~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR--LyFVMEy 431 (683)
T KOG0696|consen 354 LMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR--LYFVMEY 431 (683)
T ss_pred EEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh--eeeEEEE
Confidence 679999999999999863 456799999865422 11 22234566666655 56888999998888887 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+.||+|-.++
T Consensus 432 vnGGDLMyhi 441 (683)
T KOG0696|consen 432 VNGGDLMYHI 441 (683)
T ss_pred ecCchhhhHH
Confidence 9999997665
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00013 Score=76.56 Aligned_cols=83 Identities=24% Similarity=0.389 Sum_probs=55.4
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhc----------------------------------------HHHHH
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRH----------------------------------------KKEFA 509 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~----------------------------------------~~~~~ 509 (555)
.+.||+|++|+||+|++.+|+.||||..+.+.... .-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 56899999999999999999999999986542110 00244
Q ss_pred HHHHHHHcC----CCCcceeeeEEEEc-CCCceEEEEEeccCCCChhhhh
Q 048796 510 KEVKKIGSM----RHPNIVPLRAYYWG-PREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 510 ~ei~~l~~l----~H~niv~l~g~~~~-~~~~~~~lv~e~~~~GsL~~~l 554 (555)
+|...+.++ +|.+-+..-..|++ ... .++||||++|++|.++.
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~--~vLvmE~i~G~~L~~~~ 249 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSE--RVLTMEWIDGIPLSDIA 249 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCC--ceEEEEeECCcccccHH
Confidence 555555444 33333444344432 223 79999999999987653
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.52 E-value=2.6e-05 Score=74.01 Aligned_cols=80 Identities=20% Similarity=0.274 Sum_probs=63.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcC--CCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGP--REQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~--~~~~~~lv~e~~ 545 (555)
..+||-|--|.|-.|.. .+|+.+|+|.+... ...++|+++-... .|||||.++.+|... +...+.+|||+|
T Consensus 67 ~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~m 141 (400)
T KOG0604|consen 67 WQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECM 141 (400)
T ss_pred hhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecc
Confidence 46899999999999987 67889999988543 4456888875554 699999999988532 222488999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+||+|+..+
T Consensus 142 eGGeLfsri 150 (400)
T KOG0604|consen 142 EGGELFSRI 150 (400)
T ss_pred cchHHHHHH
Confidence 999998765
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00017 Score=65.17 Aligned_cols=88 Identities=20% Similarity=0.312 Sum_probs=67.9
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEe-CCCCEEEEEEeccC-ChhcHHHHHHHHHH-HHcCCCCcceeeeEEEEcCCCc
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG-LVRHKKEFAKEVKK-IGSMRHPNIVPLRAYYWGPREQ 536 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~ei~~-l~~l~H~niv~l~g~~~~~~~~ 536 (555)
...++|.. ...||+|++|.|-+-++ .+|+..|||++... ..+..+....|+.+ ++....|.+|.++|.+.....
T Consensus 43 V~ad~L~~--i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd- 119 (282)
T KOG0984|consen 43 VPADDLVG--IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD- 119 (282)
T ss_pred cchhhhhh--hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc-
Confidence 44455554 67899999999988876 68999999999653 33456778888876 555689999999998876665
Q ss_pred eEEEEEeccCCCChhh
Q 048796 537 ERLLLADYIQGDSLAL 552 (555)
Q Consensus 537 ~~~lv~e~~~~GsL~~ 552 (555)
.|+.||.|+- ||..
T Consensus 120 -vwIcME~M~t-Sldk 133 (282)
T KOG0984|consen 120 -VWICMELMDT-SLDK 133 (282)
T ss_pred -EEEeHHHhhh-hHHH
Confidence 9999999975 5543
|
|
| >PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00037 Score=59.76 Aligned_cols=62 Identities=18% Similarity=0.155 Sum_probs=24.4
Q ss_pred ccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCC
Q 048796 47 DMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSS 110 (555)
Q Consensus 47 ~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 110 (555)
.+|....+|+.+.+.. .+.......|.++.+|+.+.+.++ +.......|..+++|+.+.+.+
T Consensus 6 ~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~ 67 (129)
T PF13306_consen 6 NAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN 67 (129)
T ss_dssp TTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS
T ss_pred HHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc
Confidence 3444444555555543 344344444555555555555443 4433334455554555555543
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.36 E-value=8.1e-05 Score=71.58 Aligned_cols=82 Identities=20% Similarity=0.353 Sum_probs=64.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHc-CCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGS-MRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~-l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
-.+||+|+|++|-.+++ ++.+.||+|.+++.-. .+..-.+.|-.+... -+||-+|.|..++.+... +++|.||
T Consensus 255 l~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesr--lffviey 332 (593)
T KOG0695|consen 255 LRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESR--LFFVIEY 332 (593)
T ss_pred eeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccce--EEEEEEE
Confidence 67999999999999997 6788999999865322 223334555555544 479999999999887776 9999999
Q ss_pred cCCCChhhh
Q 048796 545 IQGDSLALH 553 (555)
Q Consensus 545 ~~~GsL~~~ 553 (555)
++||+|--+
T Consensus 333 v~ggdlmfh 341 (593)
T KOG0695|consen 333 VNGGDLMFH 341 (593)
T ss_pred ecCcceeee
Confidence 999998544
|
|
| >PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00059 Score=58.50 Aligned_cols=123 Identities=14% Similarity=0.217 Sum_probs=53.7
Q ss_pred ccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcccccc
Q 048796 71 NLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASE 150 (555)
Q Consensus 71 ~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~ 150 (555)
..|.++.+|+.+.+.. .+.......|..+++|+.+++..+ +.......|..+.+|+.+.+.+ .+.......|..+
T Consensus 6 ~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~-- 80 (129)
T PF13306_consen 6 NAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNC-- 80 (129)
T ss_dssp TTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT---
T ss_pred HHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccccc--
Confidence 4566666777777664 455455556667767777777664 5434444555665677777754 3332222333333
Q ss_pred ccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCC
Q 048796 151 LLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGAL 208 (555)
Q Consensus 151 l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 208 (555)
++|+.+++..+ +.......|.++ .|+.+.+.. .+.......|.++++|
T Consensus 81 -------~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 81 -------TNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp -------TTECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred -------ccccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 66677777654 444444556665 677776665 3333444556665555
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.31 E-value=1.8e-05 Score=73.96 Aligned_cols=84 Identities=23% Similarity=0.310 Sum_probs=65.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC---ceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE---QERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~---~~~~lv~e 543 (555)
++.||-|+||.||..+. .+|+.||.|++..- .....+.+.+|++++..++|.|++..+........ +++|++.|
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE 137 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE 137 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence 78999999999999998 68999999998542 22345778999999999999999998877653321 24788888
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
.|.. +|+++|
T Consensus 138 LmQS-DLHKII 147 (449)
T KOG0664|consen 138 LMQS-DLHKII 147 (449)
T ss_pred HHHh-hhhhee
Confidence 8865 666543
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0011 Score=61.48 Aligned_cols=77 Identities=14% Similarity=0.109 Sum_probs=58.2
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChh----cHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVR----HKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~----~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
...|++|+||+||.+.- .+..++.+.+...... ...-|.+|+.+|.++. |+++.+++++ .. .+++|||
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~--~~lvmey 79 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DG--RHLDRSY 79 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cC--EEEEEee
Confidence 67899999999996655 5677776766543221 1235889999999995 4788888875 23 7999999
Q ss_pred cCCCChhhh
Q 048796 545 IQGDSLALH 553 (555)
Q Consensus 545 ~~~GsL~~~ 553 (555)
++|++|.+.
T Consensus 80 I~G~~L~~~ 88 (218)
T PRK12274 80 LAGAAMYQR 88 (218)
T ss_pred ecCccHHhh
Confidence 999998754
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00053 Score=63.04 Aligned_cols=74 Identities=20% Similarity=0.359 Sum_probs=48.4
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChh--cHHH----------------------HHHHHHHHHcCCCCc--c
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVR--HKKE----------------------FAKEVKKIGSMRHPN--I 523 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~--~~~~----------------------~~~ei~~l~~l~H~n--i 523 (555)
.+.||+|+||.||+|...+|+.||||.++..... .... ...|...+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999878999999988643211 1111 134555555554432 3
Q ss_pred eeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 524 VPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 524 v~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.+++ .. .++||||+++|.
T Consensus 82 ~~~~~~----~~--~~lv~e~~~g~~ 101 (187)
T cd05119 82 PKPIDL----NR--HVLVMEFIGGDG 101 (187)
T ss_pred CceEec----CC--CEEEEEEeCCCC
Confidence 333332 23 689999999954
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.24 E-value=8.5e-05 Score=81.54 Aligned_cols=16 Identities=38% Similarity=0.632 Sum_probs=8.6
Q ss_pred CCCCCEEeCCCCcCCC
Q 048796 205 LGALEYLDLSGNQFKG 220 (555)
Q Consensus 205 l~~L~~L~Ls~N~l~~ 220 (555)
+|.|+.||.|++.+..
T Consensus 249 LpeLrfLDcSgTdi~~ 264 (699)
T KOG3665|consen 249 LPELRFLDCSGTDINE 264 (699)
T ss_pred CccccEEecCCcchhH
Confidence 4555555555555543
|
|
| >KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00016 Score=67.82 Aligned_cols=61 Identities=28% Similarity=0.339 Sum_probs=27.2
Q ss_pred CCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCC--cCCCCCchhhhCCCCCCeEEccCCccc
Q 048796 76 FDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSN--QLKGPIPDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 76 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N--~l~~~~~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
+..|+.|.+.+..++.. ..+..+++|+.|.++.| ++.+.++.....+++|++|+|++|+|.
T Consensus 42 ~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~ 104 (260)
T KOG2739|consen 42 FVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK 104 (260)
T ss_pred ccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc
Confidence 33444444444444322 12344555555555555 333333333333355555555555443
|
|
| >KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00014 Score=79.80 Aligned_cols=134 Identities=19% Similarity=0.256 Sum_probs=76.5
Q ss_pred CccEEEccCCcCC-CCCCccc-cCCCCccEEEeeCCcCCCC-CchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeE
Q 048796 54 NLEILDLSSNKLS-GSLPNLT-SQFDRLSTFNIRNNSVTGT-LPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNL 130 (555)
Q Consensus 54 ~L~~L~Ls~N~l~-~~~~~~~-~~l~~L~~L~L~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L 130 (555)
+|+.||+++...- ...+..+ ..+|+|+.|.+.+=.+... .......+++|..||+++.+++.. ..++++++|+.|
T Consensus 123 nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L 200 (699)
T KOG3665|consen 123 NLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVL 200 (699)
T ss_pred hhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHH
Confidence 5777777776532 2233333 3467777777776555322 223345667777777777777632 556677777777
Q ss_pred EccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcC------CccccCccccceeecccccccCC
Q 048796 131 NLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVL------PSDIGNMGRLRLLNLANNHLSGK 197 (555)
Q Consensus 131 ~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~------p~~~~~l~~L~~L~L~~N~l~~~ 197 (555)
.+.+=.+.. ..++..+-++++|+.||+|........ -+.-..+++|+.||.++..+...
T Consensus 201 ~mrnLe~e~--------~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~ 265 (699)
T KOG3665|consen 201 SMRNLEFES--------YQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEE 265 (699)
T ss_pred hccCCCCCc--------hhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHH
Confidence 666554431 112222223477777777776654321 01123467788888887776643
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0013 Score=70.25 Aligned_cols=81 Identities=19% Similarity=0.344 Sum_probs=54.0
Q ss_pred CCeeecCCceEEEEEEeCC-CCEEEEEEeccCChh--------------------------c--------H------HHH
Q 048796 470 AEVLGRSSHGTLYKATLDS-GHMLTVKWLRVGLVR--------------------------H--------K------KEF 508 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~-g~~vavK~l~~~~~~--------------------------~--------~------~~~ 508 (555)
.+.+|+|++|+||+|++++ |+.||||.++.+-.. . . -+|
T Consensus 124 ~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~ 203 (537)
T PRK04750 124 IKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDL 203 (537)
T ss_pred hhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCH
Confidence 3579999999999999976 999999999754210 0 0 124
Q ss_pred HHHHHHHHcCC----CCcceeeeEEEEc-CCCceEEEEEeccCCCChhh
Q 048796 509 AKEVKKIGSMR----HPNIVPLRAYYWG-PREQERLLLADYIQGDSLAL 552 (555)
Q Consensus 509 ~~ei~~l~~l~----H~niv~l~g~~~~-~~~~~~~lv~e~~~~GsL~~ 552 (555)
.+|...+.+++ +.+.+.+-..+++ ... .+|||||++|+.+.+
T Consensus 204 ~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~--~VLvmE~i~G~~l~d 250 (537)
T PRK04750 204 MREAANASQLRRNFEDSDMLYVPEVYWDYCSE--TVMVMERMYGIPVSD 250 (537)
T ss_pred HHHHHHHHHHHHHccCCCCeecceeecccCCC--ceEEEeeecCccHHh
Confidence 45554444442 4444444444443 123 789999999999865
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.00032 Score=69.84 Aligned_cols=81 Identities=16% Similarity=0.255 Sum_probs=67.2
Q ss_pred CCeeecCCceEEEEEEe-C---CCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-D---SGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~---~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|.|++||+++. . ....||+|.+.... ......+|++++..+. |.||+++.++....+. ..+|+||
T Consensus 41 v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~--v~ivlp~ 116 (418)
T KOG1167|consen 41 VNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ--VAIVLPY 116 (418)
T ss_pred hccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCe--eEEEecc
Confidence 78999999999999996 3 56789999986533 2455889999999985 8999999999888777 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++-.-.+++
T Consensus 117 ~~H~~f~~l~ 126 (418)
T KOG1167|consen 117 FEHDRFRDLY 126 (418)
T ss_pred cCccCHHHHH
Confidence 9987665543
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0021 Score=63.84 Aligned_cols=78 Identities=14% Similarity=0.093 Sum_probs=49.2
Q ss_pred CCeeecCCceEEEEEEeC-C---CCEEEEEEeccCChhc-----------HHHHHHHHHHHHcCCCCcceeeeEEEEcCC
Q 048796 470 AEVLGRSSHGTLYKATLD-S---GHMLTVKWLRVGLVRH-----------KKEFAKEVKKIGSMRHPNIVPLRAYYWGPR 534 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~---g~~vavK~l~~~~~~~-----------~~~~~~ei~~l~~l~H~niv~l~g~~~~~~ 534 (555)
.++||+|+||.||+|... + +..+|+|......... ......+...+..+.|+|++++++++....
T Consensus 17 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~ 96 (294)
T PHA02882 17 DKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKR 96 (294)
T ss_pred eeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEec
Confidence 779999999999999973 3 4456666543222110 112233445566789999999999765433
Q ss_pred C--ceEEEEEeccCC
Q 048796 535 E--QERLLLADYIQG 547 (555)
Q Consensus 535 ~--~~~~lv~e~~~~ 547 (555)
. ...++++|++..
T Consensus 97 ~~~~~~~~~~~~~~~ 111 (294)
T PHA02882 97 CRMYYRFILLEKLVE 111 (294)
T ss_pred CCceEEEEEEehhcc
Confidence 2 114677776643
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.00035 Score=65.64 Aligned_cols=81 Identities=14% Similarity=0.203 Sum_probs=63.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEE-EEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAY-YWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~-~~~~~~~~~~lv~e~~~ 546 (555)
...+|+|.||.+-.++. ...+.+++|.++.... ..++|.+|..---.+ .|.||+.-+.. +++.+. ..+++||++
T Consensus 29 ~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~--YvF~qE~aP 105 (378)
T KOG1345|consen 29 NKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDA--YVFVQEFAP 105 (378)
T ss_pred HHHhcccceeeEEeeeccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHHhhcCce--EEEeeccCc
Confidence 56899999999999998 5677899998865322 368899998765555 58999987765 455555 778999999
Q ss_pred CCChhhh
Q 048796 547 GDSLALH 553 (555)
Q Consensus 547 ~GsL~~~ 553 (555)
.|+|.+-
T Consensus 106 ~gdL~sn 112 (378)
T KOG1345|consen 106 RGDLRSN 112 (378)
T ss_pred cchhhhh
Confidence 9999864
|
|
| >KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.00047 Score=64.71 Aligned_cols=65 Identities=31% Similarity=0.458 Sum_probs=39.1
Q ss_pred cCCCCCcCEEEccCC--cCCCcCCccccCccccceeecccccccCCCchh---ccCCCCCCEEeCCCCcCCC
Q 048796 154 LPSYPPMESLDLSGN--ALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSE---LSKLGALEYLDLSGNQFKG 220 (555)
Q Consensus 154 l~~~~~L~~L~Ls~N--~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~---~~~l~~L~~L~Ls~N~l~~ 220 (555)
++.+++|+.|.++.| .+.+-++.-...+++|++|+|++|+|.. +.. +..+.+|..||+.+|..+.
T Consensus 61 ~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~--lstl~pl~~l~nL~~Ldl~n~~~~~ 130 (260)
T KOG2739|consen 61 FPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKD--LSTLRPLKELENLKSLDLFNCSVTN 130 (260)
T ss_pred CCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcccc--ccccchhhhhcchhhhhcccCCccc
Confidence 444466777777777 4443333333345777777777777762 222 3445667777887777665
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.00046 Score=72.27 Aligned_cols=79 Identities=22% Similarity=0.257 Sum_probs=64.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
...+|.|+|+.|-+|.. ++++..+||++.... .+-.+|+.++... .||||+++.+.|.+..+ .|+|||++.+
T Consensus 327 ~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~--~~~v~e~l~g 400 (612)
T KOG0603|consen 327 REELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKE--IYLVMELLDG 400 (612)
T ss_pred ccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCce--eeeeehhccc
Confidence 44699999999999987 788999999996652 2334677665555 79999999999998877 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|.+.+.+
T Consensus 401 ~ell~ri 407 (612)
T KOG0603|consen 401 GELLRRI 407 (612)
T ss_pred cHHHHHH
Confidence 9887654
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0039 Score=59.81 Aligned_cols=86 Identities=17% Similarity=0.161 Sum_probs=61.6
Q ss_pred ccCCeee-cCCceEEEEEEeCCCCEEEEEEeccCC-------------hhcHHHHHHHHHHHHcCCCCcc--eeeeEEEE
Q 048796 468 APAEVLG-RSSHGTLYKATLDSGHMLTVKWLRVGL-------------VRHKKEFAKEVKKIGSMRHPNI--VPLRAYYW 531 (555)
Q Consensus 468 ~~~~~lG-~G~~g~vy~~~~~~g~~vavK~l~~~~-------------~~~~~~~~~ei~~l~~l~H~ni--v~l~g~~~ 531 (555)
..+.+|| .|+.|+||.... .+..++||+..... ......+.+|+.++..++|++| +..+++..
T Consensus 34 ~~~~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~ 112 (239)
T PRK01723 34 QQARVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARV 112 (239)
T ss_pred hcCceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeee
Confidence 3467898 899999999988 47789999874321 1123567889999999998875 56676654
Q ss_pred cCCC--ceEEEEEeccCC-CChhhhh
Q 048796 532 GPRE--QERLLLADYIQG-DSLALHL 554 (555)
Q Consensus 532 ~~~~--~~~~lv~e~~~~-GsL~~~l 554 (555)
.... ...++|+||+++ ++|.+++
T Consensus 113 ~~~~~~~~~~lV~e~l~G~~~L~~~l 138 (239)
T PRK01723 113 VRHGLFYRADILIERIEGARDLVALL 138 (239)
T ss_pred eecCcceeeeEEEEecCCCCCHHHHH
Confidence 3221 113599999997 6887654
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.90 E-value=8.4e-05 Score=75.41 Aligned_cols=93 Identities=17% Similarity=0.191 Sum_probs=73.9
Q ss_pred ccCHHHHhcccCCeeecCCceEEEEEEeC-CCCEEEEEEeccCChh---cHHHHHHHHHHHHcCCCCcceeeeEEEEcCC
Q 048796 459 AFTAEELSRAPAEVLGRSSHGTLYKATLD-SGHMLTVKWLRVGLVR---HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR 534 (555)
Q Consensus 459 ~~~~~~l~~~~~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~ 534 (555)
...+.||++ ...||-|+||.|-..... ....+|+|.+++.+.. ..+-...|-.+|..++.|.||+||--|.++.
T Consensus 416 ~v~l~dl~~--iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~k 493 (732)
T KOG0614|consen 416 QVKLSDLKR--IATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSK 493 (732)
T ss_pred ccchhhhhh--hhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccch
Confidence 355666665 567999999999999873 2335899988654332 2344678899999999999999999999888
Q ss_pred CceEEEEEeccCCCChhhhhC
Q 048796 535 EQERLLLADYIQGDSLALHLY 555 (555)
Q Consensus 535 ~~~~~lv~e~~~~GsL~~~l~ 555 (555)
. +|++||-|-||.|...|+
T Consensus 494 y--vYmLmEaClGGElWTiLr 512 (732)
T KOG0614|consen 494 Y--VYMLMEACLGGELWTILR 512 (732)
T ss_pred h--hhhhHHhhcCchhhhhhh
Confidence 8 999999999999987763
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0077 Score=59.71 Aligned_cols=81 Identities=30% Similarity=0.486 Sum_probs=67.2
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChh---cHHHHHHHHHHHHcCCCC-cceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVR---HKKEFAKEVKKIGSMRHP-NIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~---~~~~~~~ei~~l~~l~H~-niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
...||.|+||.||++... ..+++|.+...... ....|.+|+..++.+.|+ +++++..++..... .++++||+
T Consensus 5 ~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~ 80 (384)
T COG0515 5 LRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGS--LYLVMEYV 80 (384)
T ss_pred EEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCE--EEEEEecC
Confidence 467999999999999985 78899998654332 367899999999999988 79999999865554 79999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
.++++.+++
T Consensus 81 ~~~~l~~~~ 89 (384)
T COG0515 81 DGGSLEDLL 89 (384)
T ss_pred CCCcHHHHH
Confidence 999987543
|
|
| >KOG2123 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.00016 Score=68.15 Aligned_cols=98 Identities=24% Similarity=0.308 Sum_probs=70.3
Q ss_pred CCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCc-hhc
Q 048796 124 SMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMP-SEL 202 (555)
Q Consensus 124 ~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~ 202 (555)
+.+.+.|++.++.|+. +.....++.|++|.|+-|.|+.. ..|..|++|++|+|..|.|....- ..+
T Consensus 18 l~~vkKLNcwg~~L~D-----------Isic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~sldEL~YL 84 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDD-----------ISICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIESLDELEYL 84 (388)
T ss_pred HHHhhhhcccCCCccH-----------HHHHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccccHHHHHHH
Confidence 3456677777777652 23344558889999999998865 457788999999999999874321 245
Q ss_pred cCCCCCCEEeCCCCcCCCCCChhhh-------cCCCEEE
Q 048796 203 SKLGALEYLDLSGNQFKGEIPDKLS-------LKLNEFN 234 (555)
Q Consensus 203 ~~l~~L~~L~Ls~N~l~~~~p~~~~-------~~L~~L~ 234 (555)
.++++|+.|.|..|.-.|..+.... ++|+.||
T Consensus 85 knlpsLr~LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 85 KNLPSLRTLWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hcCchhhhHhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 6889999999999988876665322 6777764
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0033 Score=59.26 Aligned_cols=83 Identities=14% Similarity=0.201 Sum_probs=60.8
Q ss_pred CeeecCCceEEEEEEeCCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCC--cceeeeEEEEcCCC-ceEEEEEeccC
Q 048796 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHP--NIVPLRAYYWGPRE-QERLLLADYIQ 546 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~--niv~l~g~~~~~~~-~~~~lv~e~~~ 546 (555)
+.++.|.++.||+++..+|..+++|....... .....+..|..++..+++. .+.+++.++..... ...++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999986678899998754332 1345788999999998764 45667776654320 01689999999
Q ss_pred CCChhhh
Q 048796 547 GDSLALH 553 (555)
Q Consensus 547 ~GsL~~~ 553 (555)
++++.+.
T Consensus 84 G~~l~~~ 90 (223)
T cd05154 84 GRVLRDR 90 (223)
T ss_pred CEecCCC
Confidence 9887654
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG2123 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.66 E-value=9.1e-05 Score=69.73 Aligned_cols=81 Identities=20% Similarity=0.276 Sum_probs=44.2
Q ss_pred CccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCc--hhhhCCCCCCeEE
Q 048796 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIP--DNFFSSMALTNLN 131 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~--~~~~~~~~L~~L~ 131 (555)
+.++|++.++.|+++ .....++.|+.|.|+=|+|+..-| |..|++|++|+|..|.|. .+. ..+.++++|+.|+
T Consensus 20 ~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~-sldEL~YLknlpsLr~LW 94 (388)
T KOG2123|consen 20 NVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIE-SLDELEYLKNLPSLRTLW 94 (388)
T ss_pred HhhhhcccCCCccHH--HHHHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccc-cHHHHHHHhcCchhhhHh
Confidence 456666666666532 233456666666666666664432 556666666666666664 221 1334455555555
Q ss_pred ccCCcccc
Q 048796 132 LSGNGFSG 139 (555)
Q Consensus 132 Ls~N~l~~ 139 (555)
|..|.-.|
T Consensus 95 L~ENPCc~ 102 (388)
T KOG2123|consen 95 LDENPCCG 102 (388)
T ss_pred hccCCccc
Confidence 55554443
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0074 Score=61.51 Aligned_cols=83 Identities=14% Similarity=0.165 Sum_probs=63.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-----C---CcceeeeEEEEcCC--CceE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-----H---PNIVPLRAYYWGPR--EQER 538 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-----H---~niv~l~g~~~~~~--~~~~ 538 (555)
.+.||=|.|++||.|.. .+.+.||+|+.+.. ....+.-+.||+++.+++ | ..||+|+.+|.-.+ ...+
T Consensus 83 ~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HV 161 (590)
T KOG1290|consen 83 QRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHV 161 (590)
T ss_pred EEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEE
Confidence 56899999999999986 56788999988653 334677889999998774 2 37999999885332 2248
Q ss_pred EEEEeccCCCChhhhh
Q 048796 539 LLLADYIQGDSLALHL 554 (555)
Q Consensus 539 ~lv~e~~~~GsL~~~l 554 (555)
++|+|++-. +|..+|
T Consensus 162 CMVfEvLGd-nLLklI 176 (590)
T KOG1290|consen 162 CMVFEVLGD-NLLKLI 176 (590)
T ss_pred EEEehhhhh-HHHHHH
Confidence 999999854 777665
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0083 Score=55.76 Aligned_cols=80 Identities=21% Similarity=0.251 Sum_probs=56.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCC-cceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHP-NIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~-niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.+|.|.. .+|..||+|.=..... ......|.++-+.++|. -|..+..|..+.+. -.+|||.+ |
T Consensus 20 vrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~y--nvlVMdLL-G 94 (341)
T KOG1163|consen 20 VRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDY--NVLVMDLL-G 94 (341)
T ss_pred EEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhcccccc--ceeeeecc-C
Confidence 56899999999999986 7899999997543322 23456677777777763 44444555555555 68999976 5
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
.+|.++.
T Consensus 95 PsLEdLf 101 (341)
T KOG1163|consen 95 PSLEDLF 101 (341)
T ss_pred ccHHHHH
Confidence 5887753
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.0027 Score=71.26 Aligned_cols=80 Identities=18% Similarity=0.258 Sum_probs=55.7
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC---CCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR---HPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~---H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
...+|+|+||+||+|...+|+.+|+|.-+....+. |.-=..++.+|+ -+.|..+...+.-.+. -++|+||.+
T Consensus 703 ~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~--S~lv~ey~~ 777 (974)
T KOG1166|consen 703 SKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNA--SVLVSEYSP 777 (974)
T ss_pred EeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCc--ceeeeeccc
Confidence 56899999999999998779999999876655432 222223444555 1223333333344455 789999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
.|+|.+++
T Consensus 778 ~Gtlld~~ 785 (974)
T KOG1166|consen 778 YGTLLDLI 785 (974)
T ss_pred cccHHHhh
Confidence 99999876
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0091 Score=53.70 Aligned_cols=77 Identities=17% Similarity=0.231 Sum_probs=54.9
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.++.|.++.||+++. .+..+++|....... ....+..|+..+..+.+..+++-+-.+. ... .++||||+++.+
T Consensus 3 ~~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~-~~~--~~lv~e~i~G~~ 77 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV-ANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD-PET--GVLITEFIEGSE 77 (170)
T ss_pred eeecCCcccCceEEEEE-CCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe-CCC--CeEEEEecCCCc
Confidence 35688999999999997 477899998755432 1235678888888887666654332332 233 589999999988
Q ss_pred hh
Q 048796 550 LA 551 (555)
Q Consensus 550 L~ 551 (555)
+.
T Consensus 78 l~ 79 (170)
T cd05151 78 LL 79 (170)
T ss_pred cc
Confidence 75
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.0049 Score=60.92 Aligned_cols=81 Identities=12% Similarity=0.191 Sum_probs=60.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCC--C----cceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRH--P----NIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H--~----niv~l~g~~~~~~~~~~~lv~ 542 (555)
...+|+|.||+|-.+.. ..+..||||.++.-. ...+.-.-||.++.++.+ | .+|.+.+++.-.++ .++|+
T Consensus 94 ~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh--iCivf 170 (415)
T KOG0671|consen 94 VDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH--ICIVF 170 (415)
T ss_pred hhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc--eEEEE
Confidence 67899999999999986 458899999986432 235666789999999842 2 35677777766677 89999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
|.|. -|++++|
T Consensus 171 ellG-~S~~dFl 181 (415)
T KOG0671|consen 171 ELLG-LSTFDFL 181 (415)
T ss_pred eccC-hhHHHHh
Confidence 9774 3677665
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.015 Score=58.65 Aligned_cols=81 Identities=14% Similarity=0.156 Sum_probs=58.4
Q ss_pred CCeeecCCceEEEEEEeCC--CCEEEEEEeccCChhcHHHHHHHHHHHHcCCC----CcceeeeEEEE-cCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLDS--GHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRH----PNIVPLRAYYW-GPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~--g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H----~niv~l~g~~~-~~~~~~~~lv~ 542 (555)
...||+|+||.||.+.... ...+|+|............+..|+.++..+.+ +++..++.... .... .++||
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~--~~iVM 100 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF--NFIVM 100 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce--eEEEE
Confidence 7899999999999999733 34788887765433322367788888888863 56777777763 4445 79999
Q ss_pred eccCCCChhhh
Q 048796 543 DYIQGDSLALH 553 (555)
Q Consensus 543 e~~~~GsL~~~ 553 (555)
+.+ |-+|.++
T Consensus 101 ~l~-G~sL~dl 110 (322)
T KOG1164|consen 101 SLL-GPSLEDL 110 (322)
T ss_pred ecc-CccHHHH
Confidence 855 5588765
|
|
| >KOG4308 consensus LRR-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.94 E-value=6.3e-05 Score=78.99 Aligned_cols=183 Identities=26% Similarity=0.267 Sum_probs=112.7
Q ss_pred ccEEEccCCcCCCCCC----ccccCCCCccEEEeeCCcCCCCCch----hccCC-CCccEEEcCCCcCCCC----Cchhh
Q 048796 55 LEILDLSSNKLSGSLP----NLTSQFDRLSTFNIRNNSVTGTLPS----LLEIS-PRLVTLDVSSNQLKGP----IPDNF 121 (555)
Q Consensus 55 L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~----~l~~l-~~L~~L~L~~N~l~~~----~~~~~ 121 (555)
+..|+|.+|.+..... ..+.....|..|++++|.+.+..-. .+... ..|+.|++..|.++.. +...+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 6777888888774333 3445567788888888887743222 22222 4566777777777643 34455
Q ss_pred hCCCCCCeEEccCCccccc----CCcCccccccccccCCCCCcCEEEccCCcCCCcCC----ccccCccc-cceeecccc
Q 048796 122 FSSMALTNLNLSGNGFSGA----IPLRSSHASELLVLPSYPPMESLDLSGNALTGVLP----SDIGNMGR-LRLLNLANN 192 (555)
Q Consensus 122 ~~~~~L~~L~Ls~N~l~~~----~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p----~~~~~l~~-L~~L~L~~N 192 (555)
.....|+.++++.|.+... ++..+.. .+....++++|.|++|.++...- ..+...+. +..|++..|
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~-----~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n 243 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELGLLVLSQALES-----AASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASN 243 (478)
T ss_pred hcccchhHHHHHhcccchhhhHHHhhhhhh-----hhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhc
Confidence 5567788888888877411 1111111 01123678888888888773221 22334445 667888888
Q ss_pred cccCCC----chhccCC-CCCCEEeCCCCcCCCCCChhhh------cCCCEEEeccCCCCC
Q 048796 193 HLSGKM----PSELSKL-GALEYLDLSGNQFKGEIPDKLS------LKLNEFNVSYNDLSG 242 (555)
Q Consensus 193 ~l~~~~----~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~------~~L~~L~ls~N~l~~ 242 (555)
.+.+.. ...+..+ ..++.++++.|.|+......+. ..++.+.+++|++..
T Consensus 244 ~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 244 KLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred CcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 887432 2234444 6778899999998876655443 467888888888764
|
|
| >KOG4308 consensus LRR-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.83 E-value=4.8e-05 Score=79.86 Aligned_cols=187 Identities=27% Similarity=0.251 Sum_probs=116.3
Q ss_pred CCEEEcCCCcCCCCC----cccccCCCCccEEEccCCcCCCCCC----ccccCC-CCccEEEeeCCcCCCC----Cchhc
Q 048796 31 CVILDLSRNMISGDI----SDMQNWEANLEILDLSSNKLSGSLP----NLTSQF-DRLSTFNIRNNSVTGT----LPSLL 97 (555)
Q Consensus 31 L~~L~L~~N~l~~~~----~~~~~~~~~L~~L~Ls~N~l~~~~~----~~~~~l-~~L~~L~L~~N~l~~~----~~~~l 97 (555)
+..|.|.+|.+..-. ......+..|+.|+|++|++.+.-- ..+... ..|++|++..|.++.. +...+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 566777777776433 2234445568888888888773211 122222 4567778888887744 33455
Q ss_pred cCCCCccEEEcCCCcCCC----CCchhhh----CCCCCCeEEccCCcccccCCcCccccccccccCCCCC-cCEEEccCC
Q 048796 98 EISPRLVTLDVSSNQLKG----PIPDNFF----SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPP-MESLDLSGN 168 (555)
Q Consensus 98 ~~l~~L~~L~L~~N~l~~----~~~~~~~----~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~-L~~L~Ls~N 168 (555)
.....++.++++.|.+.. .++..+. ...+++.|.+++|.++...- ..+ -..+...+. +..|++..|
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c---~~l--~~~l~~~~~~~~el~l~~n 243 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSC---ALL--DEVLASGESLLRELDLASN 243 (478)
T ss_pred hcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHH---HHH--HHHHhccchhhHHHHHHhc
Confidence 557788888888888741 1222333 46678888888888762111 000 011222244 666899999
Q ss_pred cCCCc----CCccccCc-cccceeecccccccCCCc----hhccCCCCCCEEeCCCCcCCCCC
Q 048796 169 ALTGV----LPSDIGNM-GRLRLLNLANNHLSGKMP----SELSKLGALEYLDLSGNQFKGEI 222 (555)
Q Consensus 169 ~l~~~----~p~~~~~l-~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~ 222 (555)
.+.+. ....+..+ ..++.++++.|.|+.... ..+..++.++.+.+++|.+....
T Consensus 244 ~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~~~ 306 (478)
T KOG4308|consen 244 KLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTDYG 306 (478)
T ss_pred CcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccccHH
Confidence 88754 22334455 678999999999985443 34456678999999999988543
|
|
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.019 Score=51.25 Aligned_cols=76 Identities=20% Similarity=0.343 Sum_probs=57.3
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
...|++|++|.||.|.| .|..+|+|.-+...+ ...+..|.+++..+....+.+=+-.|- . -.+.|||++|-.
T Consensus 27 ~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~yg---~--~~i~me~i~G~~ 98 (201)
T COG2112 27 EKELAKGTTSVVYLGEW-RGGEVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFYG---E--DFIRMEYIDGRP 98 (201)
T ss_pred hhhhhcccccEEEEeec-cCceEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEec---h--hhhhhhhhcCcc
Confidence 56899999999999999 566899998655433 577899999999998887776333222 1 346699999977
Q ss_pred hhhh
Q 048796 550 LALH 553 (555)
Q Consensus 550 L~~~ 553 (555)
|.++
T Consensus 99 L~~~ 102 (201)
T COG2112 99 LGKL 102 (201)
T ss_pred hhhh
Confidence 7653
|
|
| >PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.0085 Score=33.79 Aligned_cols=21 Identities=38% Similarity=0.717 Sum_probs=13.4
Q ss_pred CCCEEECCCCcCCCCCCCCCCC
Q 048796 9 TLSVLNLSSNSLSGTLPTSLKS 30 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~l~~ 30 (555)
+|++|||++|+|+ .+|..|.+
T Consensus 1 ~L~~Ldls~n~l~-~ip~~~~~ 21 (22)
T PF00560_consen 1 NLEYLDLSGNNLT-SIPSSFSN 21 (22)
T ss_dssp TESEEEETSSEES-EEGTTTTT
T ss_pred CccEEECCCCcCE-eCChhhcC
Confidence 4677777777776 55555544
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A .... |
| >PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.014 Score=32.87 Aligned_cols=18 Identities=56% Similarity=0.768 Sum_probs=8.9
Q ss_pred ccEEEccCCcCCCCCCccc
Q 048796 55 LEILDLSSNKLSGSLPNLT 73 (555)
Q Consensus 55 L~~L~Ls~N~l~~~~~~~~ 73 (555)
|++|||++|+|+ .+|..|
T Consensus 2 L~~Ldls~n~l~-~ip~~~ 19 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSF 19 (22)
T ss_dssp ESEEEETSSEES-EEGTTT
T ss_pred ccEEECCCCcCE-eCChhh
Confidence 555555555555 344333
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A .... |
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.077 Score=55.00 Aligned_cols=76 Identities=24% Similarity=0.222 Sum_probs=54.9
Q ss_pred ceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCc--eEEEEEeccCC-CChhhh
Q 048796 478 HGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ--ERLLLADYIQG-DSLALH 553 (555)
Q Consensus 478 ~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~--~~~lv~e~~~~-GsL~~~ 553 (555)
-.+.||+.. .+|..|+.||++....+.......-++.++++.|+|+|++..++...... -+.+||+|.++ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 357899985 68999999999544333333344556789999999999999887632211 27899999996 466554
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.034 Score=57.26 Aligned_cols=79 Identities=18% Similarity=0.150 Sum_probs=59.5
Q ss_pred eeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCC------CcceeeeEEEEcCCCceEEEEEec
Q 048796 472 VLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRH------PNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 472 ~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H------~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
..|+|-|+.|.+|.. ..|..||||++..... -.+.=..|+.+|.+|.. -+.++|+..|.-..+ ++||+|-
T Consensus 439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH--LClVFE~ 515 (752)
T KOG0670|consen 439 YTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH--LCLVFEP 515 (752)
T ss_pred ccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce--eEEEehh
Confidence 578999999999986 5688999999965322 12344678999998852 366788777776677 9999998
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+.. +|.+.|
T Consensus 516 Lsl-NLRevL 524 (752)
T KOG0670|consen 516 LSL-NLREVL 524 (752)
T ss_pred hhc-hHHHHH
Confidence 765 677665
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.016 Score=56.11 Aligned_cols=82 Identities=21% Similarity=0.251 Sum_probs=59.2
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC----CceEEEEEe
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR----EQERLLLAD 543 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~----~~~~~lv~e 543 (555)
..+|.|.= .|..+.. -.++.||+|++... .....+.-.+|..+|..+.|+||++++.++.-.. ..+.|+|||
T Consensus 23 ~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e 101 (369)
T KOG0665|consen 23 KPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVME 101 (369)
T ss_pred cccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHH
Confidence 35666665 4555543 46889999988442 2234567789999999999999999999885332 235899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
||.. +|.+.+
T Consensus 102 ~m~~-nl~~vi 111 (369)
T KOG0665|consen 102 LMDA-NLCQVI 111 (369)
T ss_pred hhhh-HHHHHH
Confidence 9976 776654
|
|
| >PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli [] | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.023 Score=47.99 Aligned_cols=33 Identities=30% Similarity=0.382 Sum_probs=29.0
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV 502 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~ 502 (555)
.+.||+|+.|+||+|++++|+.||||..+.+-.
T Consensus 16 ~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~ 48 (119)
T PF03109_consen 16 PEPLASASIAQVHRARLKDGEEVAVKVQRPGIE 48 (119)
T ss_pred cchhhheehhhheeeeecccchhhhhhcchHHH
Confidence 568999999999999998999999999876543
|
These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins. |
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=93.76 E-value=0.1 Score=51.09 Aligned_cols=79 Identities=15% Similarity=0.199 Sum_probs=52.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
+..||+|+||..+.|+. -+++.||||-=.... ..-+...|-+.-+.+ .-+.|...+.|-..+.+ =.||+|.+ |
T Consensus 33 GkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~--NiLVidLL-G 107 (449)
T KOG1165|consen 33 GKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKY--NILVIDLL-G 107 (449)
T ss_pred ccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccch--hhhhhhhh-C
Confidence 89999999999999984 689999999643221 122344455444444 34666666655444444 56899976 5
Q ss_pred CChhhh
Q 048796 548 DSLALH 553 (555)
Q Consensus 548 GsL~~~ 553 (555)
-+|.|+
T Consensus 108 PSLEDL 113 (449)
T KOG1165|consen 108 PSLEDL 113 (449)
T ss_pred cCHHHH
Confidence 577765
|
|
| >KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.42 E-value=0.014 Score=62.06 Aligned_cols=110 Identities=28% Similarity=0.159 Sum_probs=52.1
Q ss_pred CCCCCEEEcCCCc-CCCC-CcccccCCCCccEEEccCC-cCCCCC----CccccCCCCccEEEeeCCc-CCCCCchhcc-
Q 048796 28 LKSCVILDLSRNM-ISGD-ISDMQNWEANLEILDLSSN-KLSGSL----PNLTSQFDRLSTFNIRNNS-VTGTLPSLLE- 98 (555)
Q Consensus 28 l~~L~~L~L~~N~-l~~~-~~~~~~~~~~L~~L~Ls~N-~l~~~~----~~~~~~l~~L~~L~L~~N~-l~~~~~~~l~- 98 (555)
.++|+.|.+..+. +... ........++|+.|+++++ ...... ......+++|+.|+++.+. ++...-..+.
T Consensus 187 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~~ 266 (482)
T KOG1947|consen 187 CPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALAS 266 (482)
T ss_pred CchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHHh
Confidence 4555666665552 2221 1233344456666666652 111111 1123344666667766666 4433222232
Q ss_pred CCCCccEEEcCCCc-CCCCCch-hhhCCCCCCeEEccCCcc
Q 048796 99 ISPRLVTLDVSSNQ-LKGPIPD-NFFSSMALTNLNLSGNGF 137 (555)
Q Consensus 99 ~l~~L~~L~L~~N~-l~~~~~~-~~~~~~~L~~L~Ls~N~l 137 (555)
.+++|+.|.+.++. ++...-. ....++.|+.|+|+++..
T Consensus 267 ~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~ 307 (482)
T KOG1947|consen 267 RCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHG 307 (482)
T ss_pred hCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCcc
Confidence 25667777666555 3322111 223355677777765543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 555 | ||||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 2e-17 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 3e-17 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 6e-12 |
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 555 | |||
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-57 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 6e-56 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-53 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 2e-52 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-48 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 2e-48 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 3e-46 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 3e-55 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 1e-48 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 7e-48 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 3e-39 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 1e-29 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 3e-16 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 3e-37 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 2e-36 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 2e-36 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 1e-28 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 3e-28 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 1e-24 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 2e-22 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 1e-20 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 5e-37 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 1e-33 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 5e-33 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 2e-30 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 3e-29 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 3e-24 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 7e-10 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-36 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 6e-35 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 7e-34 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-33 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-33 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-32 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 6e-32 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-31 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 3e-33 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 4e-30 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 2e-28 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 2e-28 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 2e-25 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 5e-22 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 2e-21 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 2e-09 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 9e-33 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 1e-30 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 8e-25 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 5e-24 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 7e-24 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 3e-23 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 4e-32 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-30 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 4e-30 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 4e-28 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 7e-27 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 5e-26 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 4e-24 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-16 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-07 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 1e-27 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 7e-25 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 1e-24 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 2e-24 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 1e-21 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 6e-21 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-27 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-26 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 5e-24 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 2e-26 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 1e-25 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 6e-18 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 1e-15 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 2e-24 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 1e-23 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 3e-19 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 2e-18 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 3e-24 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 1e-19 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 9e-17 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 2e-15 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 4e-24 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 2e-21 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 7e-21 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 1e-20 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 3e-16 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 9e-11 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 6e-09 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 9e-05 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 1e-23 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 7e-18 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 2e-12 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-23 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 6e-18 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-07 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 2e-23 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 2e-21 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 2e-11 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 7e-09 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 9e-07 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 3e-23 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 3e-22 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 7e-18 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 4e-16 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 3e-23 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 2e-20 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 4e-20 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 5e-19 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 5e-18 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 2e-17 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 1e-09 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 1e-22 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 2e-21 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 2e-19 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 5e-17 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 1e-13 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 8e-13 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-22 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-20 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 2e-19 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 2e-19 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-15 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 5e-10 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-04 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 4e-22 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 3e-18 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 9e-13 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 1e-09 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 2e-21 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 5e-20 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 3e-17 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 7e-15 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 2e-08 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 3e-05 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-20 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-18 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 5e-17 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 1e-20 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 2e-18 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 7e-18 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 8e-12 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 1e-11 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 6e-09 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 1e-20 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 1e-10 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 3e-20 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 3e-15 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 5e-11 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 1e-08 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 2e-07 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 1e-05 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 3e-20 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 2e-19 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 4e-20 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 5e-19 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 2e-12 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 3e-11 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 2e-19 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 2e-18 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 3e-16 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 5e-16 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 2e-14 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 1e-12 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 3e-19 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 5e-18 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 4e-19 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 3e-13 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 4e-09 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 1e-05 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 4e-18 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 2e-15 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 1e-06 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 2e-06 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 3e-04 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 4e-17 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 2e-05 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 4e-17 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 1e-15 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 6e-14 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 6e-10 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-09 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 7e-09 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 8e-17 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 6e-12 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 2e-09 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 2e-09 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-07 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 8e-17 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 3e-13 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 2e-07 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 4e-06 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-16 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-13 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 2e-16 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 1e-13 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 6e-13 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 3e-11 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 1e-05 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 2e-05 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 9e-16 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 7e-15 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 6e-12 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 6e-10 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 1e-15 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 4e-11 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 1e-08 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 3e-04 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 5e-15 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 1e-12 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 1e-14 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 3e-13 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 7e-10 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 2e-09 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 8e-09 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 8e-14 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 4e-12 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 3e-13 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 3e-11 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 8e-09 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 3e-13 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-13 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-12 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-12 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-11 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-05 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 4e-12 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 1e-11 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 3e-05 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 8e-12 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 1e-10 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 3e-10 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 5e-05 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 2e-10 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 1e-09 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 4e-10 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 6e-07 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 6e-06 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 1e-05 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 6e-10 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 4e-09 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 9e-09 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 5e-09 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-07 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 3e-07 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 3e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 7e-09 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 6e-08 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 3e-07 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 3e-07 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 6e-07 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 8e-09 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 9e-09 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 1e-06 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 1e-08 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-08 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 7e-06 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 3e-08 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 3e-05 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 1e-07 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 2e-07 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 6e-04 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 4e-07 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 7e-07 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 6e-06 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 1e-05 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 6e-05 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 3e-06 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 4e-06 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 5e-06 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 7e-06 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 2e-04 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 7e-06 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 9e-06 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 2e-05 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 1e-05 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 2e-05 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 4e-04 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 6e-04 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 2e-05 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 1e-04 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 2e-05 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 2e-05 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 4e-05 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 4e-05 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 2e-04 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 1e-04 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 2e-04 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 4e-04 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 5e-04 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 5e-04 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 7e-04 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 7e-04 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 7e-04 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 8e-04 |
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 204 bits (522), Expect = 1e-57
Identities = 84/292 (28%), Positives = 133/292 (45%), Gaps = 25/292 (8%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSC---VILDLSRNMISGDI-SDMQNWEANLEILDLS 61
N T L+ ++LS+N L+G +P + IL LS N SG+I +++ + +L LDL+
Sbjct: 488 NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCR-SLIWLDLN 546
Query: 62 SNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSN--QLKGPIPD 119
+N +G++P + + S I N + G ++ + N + +G +
Sbjct: 547 TNLFNGTIP---AAMFKQS-GKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSE 602
Query: 120 NFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIG 179
N++ + G S M LD+S N L+G +P +IG
Sbjct: 603 QLNRLSTRNPCNITSRVYGGHTS------PTFDNNGS---MMFLDMSYNMLSGYIPKEIG 653
Query: 180 NMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSY 237
+M L +LNL +N +SG +P E+ L L LDLS N+ G IP +S L E ++S
Sbjct: 654 SMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 713
Query: 238 NDLSGPIPEN--LRNFPKSSFHPGNALLIFPDGVPSSATNSQGQNSARGKHH 287
N+LSGPIPE FP + F N L +N+ G + HH
Sbjct: 714 NNLSGPIPEMGQFETFPPAKFL-NNPGLCGYPLPRCDPSNADGYAHHQRSHH 764
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 6e-56
Identities = 96/264 (36%), Positives = 130/264 (49%), Gaps = 21/264 (7%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTS----LKSCVILDLSRNMISGDI-SDMQNWEANL 55
I + +L L+L+ N +G +P + LDLS N G + + + L
Sbjct: 262 PIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC-SLL 320
Query: 56 EILDLSSNKLSGSLPNLT-SQFDRLSTFNIRNNSVTGTLP-SLLEISPRLVTLDVSSNQL 113
E L LSSN SG LP T + L ++ N +G LP SL +S L+TLD+SSN
Sbjct: 321 ESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNF 380
Query: 114 KGPIPDNFFSSM--ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT 171
GPI N + L L L NGF+G IP S+ SEL SL LS N L+
Sbjct: 381 SGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL---------VSLHLSFNYLS 431
Query: 172 GVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LK 229
G +PS +G++ +LR L L N L G++P EL + LE L L N GEIP LS
Sbjct: 432 GTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTN 491
Query: 230 LNEFNVSYNDLSGPIPENLRNFPK 253
LN ++S N L+G IP+ +
Sbjct: 492 LNWISLSNNRLTGEIPKWIGRLEN 515
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 193 bits (492), Expect = 1e-53
Identities = 92/263 (34%), Positives = 131/263 (49%), Gaps = 23/263 (8%)
Query: 3 HGINSTTLSVLNLSSNSLSGTLPTSLKSC------VILDLSRNMISGDISDMQNWEANLE 56
G+ +L VL+LS+NS+SG L +S N ISGD+ + NLE
Sbjct: 146 GGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD-VSRC-VNLE 203
Query: 57 ILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGP 116
LD+SSN S +P L L +I N ++G + L L++SSNQ GP
Sbjct: 204 FLDVSSNNFSTGIPFL-GDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGP 262
Query: 117 IPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPS 176
IP S L L+L+ N F+G IP + + LDLSGN G +P
Sbjct: 263 IPPLPLKS--LQYLSLAENKFTGEIP--DFLSGAC------DTLTGLDLSGNHFYGAVPP 312
Query: 177 DIGNMGRLRLLNLANNHLSGKMPSE-LSKLGALEYLDLSGNQFKGEIPD---KLSLKLNE 232
G+ L L L++N+ SG++P + L K+ L+ LDLS N+F GE+P+ LS L
Sbjct: 313 FFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLT 372
Query: 233 FNVSYNDLSGPIPENLRNFPKSS 255
++S N+ SGPI NL PK++
Sbjct: 373 LDLSSNNFSGPILPNLCQNPKNT 395
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 190 bits (485), Expect = 2e-52
Identities = 82/263 (31%), Positives = 118/263 (44%), Gaps = 31/263 (11%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTS----LKSCVILDLSRNMISGDISDMQNWEAN---LEIL 58
+ + L LN+SSN+L S L S +LDLS N ISG L+ L
Sbjct: 124 SCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHL 183
Query: 59 DLSSNKLSGSLP--NLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGP 116
+S NK+SG + + L ++ +N+ + +P L + S L LD+S N+L G
Sbjct: 184 AISGNKISGDVDVSRCVN----LEFLDVSSNNFSTGIPFLGDCS-ALQHLDISGNKLSGD 238
Query: 117 IPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPS 176
+ L LN+S N F G IP L + L L+ N TG +P
Sbjct: 239 FSRAISTCTELKLLNISSNQFVGPIP--PLPLKSL---------QYLSLAENKFTGEIPD 287
Query: 177 DI-GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPD----KLSLKLN 231
+ G L L+L+ NH G +P LE L LS N F GE+P K+ L
Sbjct: 288 FLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMR-GLK 346
Query: 232 EFNVSYNDLSGPIPENLRNFPKS 254
++S+N+ SG +PE+L N S
Sbjct: 347 VLDLSFNEFSGELPESLTNLSAS 369
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 179 bits (456), Expect = 1e-48
Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 25/257 (9%)
Query: 6 NSTTLSVLNLSSNSLSGTLPT------SLKSCVILDLSRNMISGDISDMQNWEANLEILD 59
++ ++LSS L+ SL L LS + I+G +S + A+L LD
Sbjct: 48 RDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCS-ASLTSLD 106
Query: 60 LSSNKLSGSLPNLTS--QFDRLSTFNIRNNSVTGTLPSLLEIS-PRLVTLDVSSNQLKGP 116
LS N LSG + LTS L N+ +N++ + L LD+S+N + G
Sbjct: 107 LSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGA 166
Query: 117 IPDNFFSSMALTNL---NLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGV 173
+ S L +SGN SG + + + +E LD+S N +
Sbjct: 167 NVVGWVLSDGCGELKHLAISGNKISGDVDVSR--------CVN---LEFLDVSSNNFSTG 215
Query: 174 LPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEF 233
+P +G+ L+ L+++ N LSG +S L+ L++S NQF G IP L
Sbjct: 216 IPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYL 274
Query: 234 NVSYNDLSGPIPENLRN 250
+++ N +G IP+ L
Sbjct: 275 SLAENKFTGEIPDFLSG 291
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 2e-48
Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 18/251 (7%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSC---VILDLSRNMISGDI-SDMQNWEANLEILDLS 61
+ + L L L N L G +P L L L N ++G+I S + N NL + LS
Sbjct: 440 SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC-TNLNWISLS 498
Query: 62 SNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNF 121
+N+L+G +P + + L+ + NNS +G +P+ L L+ LD+++N G IP
Sbjct: 499 NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Query: 122 FSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNM 181
F ++ N +G + + + G+ + +
Sbjct: 559 FKQS----GKIAANFIAGKRYVYIKNDGMKKEC-------HGAGNLLEFQGIRSEQLNRL 607
Query: 182 GRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYND 239
N+ + G G++ +LD+S N G IP ++ L N+ +ND
Sbjct: 608 STRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHND 667
Query: 240 LSGPIPENLRN 250
+SG IP+ + +
Sbjct: 668 ISGSIPDEVGD 678
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 172 bits (438), Expect = 3e-46
Identities = 66/257 (25%), Positives = 107/257 (41%), Gaps = 24/257 (9%)
Query: 7 STTLSVLNLSSNSLSGTLPTSLKSC-----VILDLSRNMISGDI-SDMQNWEANLEILDL 60
S +L L+LSSN+ SG + +L L L N +G I + N + L L L
Sbjct: 367 SASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNC-SELVSLHL 425
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
S N LSG++P+ +L + N + G +P L L TL + N L G IP
Sbjct: 426 SFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG 485
Query: 121 FFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN 180
+ L ++LS N +G IP + L + + L LS N+ +G +P+++G+
Sbjct: 486 LSNCTNLNWISLSNNRLTGEIP------KWIGRLEN---LAILKLSNNSFSGNIPAELGD 536
Query: 181 MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS----LKLNEFNVS 236
L L+L N +G +P+ + K ++ N G+ + K +
Sbjct: 537 CRSLIWLDLNTNLFNGTIPAAMFKQ----SGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592
Query: 237 YNDLSGPIPENLRNFPK 253
+ G E L
Sbjct: 593 LLEFQGIRSEQLNRLST 609
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 188 bits (479), Expect = 3e-55
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 23/269 (8%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTS-----LKSCVILDLS-RNMISGDISDMQNWEANLEILD 59
+ ++ L+LS +L P L L + N + G I L L
Sbjct: 48 QTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLY 107
Query: 60 LSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPD 119
++ +SG++P+ SQ L T + N+++GTLP + P LV + N++ G IPD
Sbjct: 108 ITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD 167
Query: 120 NFFS-SMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDI 178
++ S S T++ +S N +G IP ++ + + +DLS N L G
Sbjct: 168 SYGSFSKLFTSMTISRNRLTGKIPPTFANLN----------LAFVDLSRNMLEGDASVLF 217
Query: 179 GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVS 236
G+ + ++LA N L+ + + L LDL N+ G +P L+ L+ NVS
Sbjct: 218 GSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVS 276
Query: 237 YNDLSGPIPE--NLRNFPKSSFHPGNALL 263
+N+L G IP+ NL+ F S++ N L
Sbjct: 277 FNNLCGEIPQGGNLQRFDVSAYA-NNKCL 304
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 170 bits (432), Expect = 1e-48
Identities = 59/252 (23%), Positives = 97/252 (38%), Gaps = 24/252 (9%)
Query: 13 LNLSSNSLSGTLPTSLKSC---VILDLSRNMISG------DISDMQNWEANLEILDLSS- 62
+ + + G L + LDLS + ++++ L L +
Sbjct: 31 TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLP----YLNFLYIGGI 86
Query: 63 NKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFF 122
N L G +P ++ +L I + +V+G +P L LVTLD S N L G +P +
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 123 SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMG 182
S L + GN SGAIP S+ +S N LTG +P N+
Sbjct: 147 SLPNLVGITFDGNRISGAIP------DSYGSFSK--LFTSMTISRNRLTGKIPPTFANL- 197
Query: 183 RLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLK-LNEFNVSYNDLS 241
L ++L+ N L G + + L+ N ++ K LN ++ N +
Sbjct: 198 NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIY 257
Query: 242 GPIPENLRNFPK 253
G +P+ L
Sbjct: 258 GTLPQGLTQLKF 269
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 7e-48
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 27/252 (10%)
Query: 6 NSTTLSVLNLSS-NSLSGTLPTSLKSC---VILDLSRNMISGDI----SDMQNWEANLEI 57
N L+ L + N+L G +P ++ L ++ +SG I S ++ L
Sbjct: 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT----LVT 129
Query: 58 LDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLP-SLLEISPRLVTLDVSSNQLKGP 116
LD S N LSG+LP S L N ++G +P S S ++ +S N+L G
Sbjct: 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGK 189
Query: 117 IPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPS 176
IP F+++ L ++LS N G + + + L+ N+L L
Sbjct: 190 IPP-TFANLNLAFVDLSRNMLEGDAS------VLFGSDKN---TQKIHLAKNSLAFDLGK 239
Query: 177 DIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLK-LNEFNV 235
+G L L+L NN + G +P L++L L L++S N GEIP +L+ +
Sbjct: 240 -VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAY 298
Query: 236 SYNDL--SGPIP 245
+ N P+P
Sbjct: 299 ANNKCLCGSPLP 310
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 144 bits (367), Expect = 3e-39
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 17/213 (7%)
Query: 43 GDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEIS-- 100
G+ + + +W D + G L + +Q R++ ++ ++ P ++
Sbjct: 19 GNPTTLSSWLPTT---DCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANL 75
Query: 101 PRLVTLDVSS-NQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPP 159
P L L + N L GPIP L L ++ SGAIP S L
Sbjct: 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL-------- 127
Query: 160 MESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGAL-EYLDLSGNQF 218
+LD S NAL+G LP I ++ L + N +SG +P L + +S N+
Sbjct: 128 -VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 219 KGEIPDKLS-LKLNEFNVSYNDLSGPIPENLRN 250
G+IP + L L ++S N L G +
Sbjct: 187 TGKIPPTFANLNLAFVDLSRNMLEGDASVLFGS 219
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 1e-29
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 105 TLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164
T D + G + D + + NL+LSG P+ S L LP + L
Sbjct: 30 TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPI----PSSLANLPY---LNFLY 82
Query: 165 LSG-NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIP 223
+ G N L G +P I + +L L + + ++SG +P LS++ L LD S N G +P
Sbjct: 83 IGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLP 142
Query: 224 DKLSL--KLNEFNVSYNDLSGPIPENLRNFPK 253
+S L N +SG IP++ +F K
Sbjct: 143 PSISSLPNLVGITFDGNRISGAIPDSYGSFSK 174
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 79.1 bits (196), Expect = 3e-16
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 161 ESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKM--PSELSKLGALEYLDLSG-NQ 217
+ D GVL R+ L+L+ +L PS L+ L L +L + G N
Sbjct: 29 PTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINN 88
Query: 218 FKGEIPDKLSL--KLNEFNVSYNDLSGPIPENLRNFPK 253
G IP ++ +L+ +++ ++SG IP+ L
Sbjct: 89 LVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 3e-37
Identities = 60/255 (23%), Positives = 93/255 (36%), Gaps = 18/255 (7%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKL 65
+ L L + LKS L + N S++ +LE LDLS N L
Sbjct: 302 YNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP--SLEFLDLSRNGL 359
Query: 66 S--GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFS 123
S G L ++ N V T+ S +L LD + LK + F
Sbjct: 360 SFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFL 418
Query: 124 SM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDI-GNM 181
S+ L L++S A L S +E L ++GN+ DI +
Sbjct: 419 SLRNLIYLDISHTHTRVAFN------GIFNGLSS---LEVLKMAGNSFQENFLPDIFTEL 469
Query: 182 GRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYND 239
L L+L+ L P+ + L +L+ L++S N F L + S N
Sbjct: 470 RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 529
Query: 240 LSGPIPENLRNFPKS 254
+ + L++FP S
Sbjct: 530 IMTSKKQELQHFPSS 544
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 2e-36
Identities = 54/270 (20%), Positives = 96/270 (35%), Gaps = 22/270 (8%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTS-----LKSCVILDLSRNMISGDISDMQNWEANL 55
+ ++ +L L+LS N LS S S LDLS N + S+ E L
Sbjct: 340 AFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLE-QL 398
Query: 56 EILDLSSNKLSGSLP-NLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLK 114
E LD + L ++ L +I + + L L ++ N +
Sbjct: 399 EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 458
Query: 115 GPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGV 173
+ F+ + LT L+LS P + S L + L++S N +
Sbjct: 459 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL---------QVLNMSHNNFFSL 509
Query: 174 LPSDIGNMGRLRLLNLANNHLSGKMPSELSKL-GALEYLDLSGNQFKGEIPDKLSLK--- 229
+ L++L+ + NH+ EL +L +L+L+ N F + L+
Sbjct: 510 DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIK 569
Query: 230 -LNEFNVSYNDLSGPIPENLRNFPKSSFHP 258
+ V + P + + P S +
Sbjct: 570 DQRQLLVEVERMECATPSDKQGMPVLSLNI 599
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 2e-36
Identities = 53/252 (21%), Positives = 95/252 (37%), Gaps = 16/252 (6%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEA--NLEI 57
+ +L L +SN L S LDLSRN +S Q+ +L+
Sbjct: 318 QFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKY 377
Query: 58 LDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLP-SLLEISPRLVTLDVSSNQLKGP 116
LDLS N + + + ++L + +++++ S+ L+ LD+S +
Sbjct: 378 LDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVA 436
Query: 117 IPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPS 176
F +L L ++GN F L + + LDLS L + P+
Sbjct: 437 FNGIFNGLSSLEVLKMAGNSFQENFL-----PDIFTELRN---LTFLDLSQCQLEQLSPT 488
Query: 177 DIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPD---KLSLKLNEF 233
++ L++LN+++N+ L +L+ LD S N L
Sbjct: 489 AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFL 548
Query: 234 NVSYNDLSGPIP 245
N++ ND +
Sbjct: 549 NLTQNDFACTCE 560
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 1e-28
Identities = 38/268 (14%), Positives = 78/268 (29%), Gaps = 26/268 (9%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCV---ILDLSRNMISGDISDMQNWEANLEILDLSS 62
+ + LS L L+ N + + L ++ + L+ L+++
Sbjct: 74 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAH 133
Query: 63 NKL-SGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLL----EISPRLVTLDVSSNQLKGPI 117
N + S LP S L ++ +N + + L ++ ++LD+S N + I
Sbjct: 134 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-I 192
Query: 118 PDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTG---VL 174
F + L L L N S + L E L +
Sbjct: 193 QPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGL--------EVHRLVLGEFRNEGNLE 244
Query: 175 PSDIGNMGRLRLLNLANNHLS------GKMPSELSKLGALEYLDLSGNQFKGEIPDKLSL 228
D + L L + L+ + + L + L + +
Sbjct: 245 KFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNF 304
Query: 229 KLNEFNVSYNDLSGPIPENLRNFPKSSF 256
+ L++ + +F
Sbjct: 305 GWQHLELVNCKFGQFPTLKLKSLKRLTF 332
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 3e-28
Identities = 51/266 (19%), Positives = 84/266 (31%), Gaps = 27/266 (10%)
Query: 5 INSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK 64
+ + T + L+ + LP S K LDLS N + S L++LDLS +
Sbjct: 7 VPNITYQCMELNFYKIPDNLPFSTK---NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE 63
Query: 65 LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSS 124
+ LST + N + L L L
Sbjct: 64 IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHL 123
Query: 125 MALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRL 184
L LN++ N L + +E LDLS N + + +D+ + ++
Sbjct: 124 KTLKELNVAHNLIQSFKL-----PEYFSNLTN---LEHLDLSSNKIQSIYCTDLRVLHQM 175
Query: 185 RL----LNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDK----------LSLKL 230
L L+L+ N ++ P ++ L L L N + L L
Sbjct: 176 PLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVL 234
Query: 231 NEFNVSYNDLSGPIPENLRNFPKSSF 256
EF + +L L +
Sbjct: 235 GEFR-NEGNLEKFDKSALEGLCNLTI 259
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 1e-24
Identities = 53/262 (20%), Positives = 90/262 (34%), Gaps = 42/262 (16%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKL 65
+ L VL+LS + + +S ++L L L+ N +
Sbjct: 50 SFPELQVLDLSRCEIQTIEDGAYQSL---------------------SHLSTLILTGNPI 88
Query: 66 SGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM 125
S L ++ + L L+V+ N ++ +FS++
Sbjct: 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNL 148
Query: 126 -ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPME-SLDLSGNALTGVLPSDIGNMGR 183
L +L+LS N ++L VL P + SLDLS N + + P + R
Sbjct: 149 TNLEHLDLSSNKIQSIYC------TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-R 201
Query: 184 LRLLNLANNHLSGKMPSE-LSKLGALEYLDLSGNQFKGEIPDKL----------SLKLNE 232
L L L NN S + + L LE L +F+ E + +L + E
Sbjct: 202 LHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEE 261
Query: 233 FNVSYNDLS-GPIPENLRNFPK 253
F ++Y D I +
Sbjct: 262 FRLAYLDYYLDDIIDLFNCLTN 283
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 2e-22
Identities = 31/163 (19%), Positives = 59/163 (36%), Gaps = 12/163 (7%)
Query: 98 EISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSY 157
+ LD+S N L+ +FFS L L+LS L
Sbjct: 25 NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIED------GAYQSLSH- 77
Query: 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQ 217
+ +L L+GN + + + L+ L +L+ + L L+ L+++ N
Sbjct: 78 --LSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNL 135
Query: 218 FKG-EIPDKLSL--KLNEFNVSYNDLSGPIPENLRNFPKSSFH 257
+ ++P+ S L ++S N + +LR +
Sbjct: 136 IQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 1e-20
Identities = 51/270 (18%), Positives = 84/270 (31%), Gaps = 41/270 (15%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSC-------VILDLSRNMISGDISDMQNWEANLEIL 58
N T L L+LSSN + T L+ + LDLS N ++ I E L L
Sbjct: 147 NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKL 205
Query: 59 DLSSNKLSGSLPNLT-SQFDRLSTFNIRNNSVTGTLPSLLEISP----RLVTLDVSSNQL 113
L +N S ++ L + +L + L L + +L
Sbjct: 206 TLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN-EGNLEKFDKSALEGLCNLTIEEFRL 264
Query: 114 K------GPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSG 167
I D F +++ +L S + L+L
Sbjct: 265 AYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDF-----SYNFGW------QHLELVN 313
Query: 168 NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQ--FKGEIPDK 225
+ ++ RL + + L +LE+LDLS N FKG
Sbjct: 314 CKFGQFPTLKLKSLKRLTFTSNKGGNAFS-----EVDLPSLEFLDLSRNGLSFKGCCSQS 368
Query: 226 LS--LKLNEFNVSYNDLSGPIPENLRNFPK 253
L ++S+N + + N +
Sbjct: 369 DFGTTSLKYLDLSFNGVIT-MSSNFLGLEQ 397
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 5e-37
Identities = 44/276 (15%), Positives = 101/276 (36%), Gaps = 36/276 (13%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSC---VILDLSRNMISG--DISDMQNWEANLEILDL 60
+ L+ LNL+ N ++ L + N + +I D ++ + +D
Sbjct: 351 SEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVS-VMSAIDF 409
Query: 61 SSNKLSG-------SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQL 113
S N++ L + +S+ N+ NN ++ L L ++++ N L
Sbjct: 410 SYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNML 469
Query: 114 KG-------PIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLS 166
+NF ++ LT+++L N + + A+ L L +DLS
Sbjct: 470 TEIPKNSLKDENENFKNTYLLTSIDLRFNKLTK-LS-DDFRATTLPYL------VGIDLS 521
Query: 167 GNALTGVLPSDIGNMGRLRLL------NLANNHLSGKMPSELSKLGALEYLDLSGNQFKG 220
N+ + P+ N L+ + N + P ++ +L L + N +
Sbjct: 522 YNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRK 580
Query: 221 EIPDKLSLKLNEFNVSYNDLSGPIPENLRNFPKSSF 256
+ +K++ ++ ++ N + + ++
Sbjct: 581 -VNEKITPNISVLDIKDNPNISIDLSYVCPYIEAGM 615
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 1e-33
Identities = 52/272 (19%), Positives = 101/272 (37%), Gaps = 40/272 (14%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSC---VILDLSRNMISGDISDMQNWEA--------N 54
N L+ + + + LPT LK+ +++++ N +W+A
Sbjct: 247 NLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEK 306
Query: 55 LEILDLSSNKL-SGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQL 113
++I+ + N L + + + +L N + G LP+ +L +L+++ NQ+
Sbjct: 307 IQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEI-KLASLNLAYNQI 365
Query: 114 KGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTG 172
IP NF + NL+ + N IP + S M ++D S N +
Sbjct: 366 TE-IPANFCGFTEQVENLSFAHNKLKY-IP-------NIFDAKSVSVMSAIDFSYNEIGS 416
Query: 173 V-------LPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDK 225
V L + +NL+NN +S S L ++L GN +
Sbjct: 417 VDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNS 476
Query: 226 LSL---------KLNEFNVSYNDLSGPIPENL 248
L L ++ +N L+ + ++
Sbjct: 477 LKDENENFKNTYLLTSIDLRFNKLTK-LSDDF 507
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 5e-33
Identities = 33/268 (12%), Positives = 80/268 (29%), Gaps = 35/268 (13%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSC---VILDLSRNMISGDISDMQNWE----ANLEIL 58
++ ++ L+L SG +P ++ +L L + + + E
Sbjct: 79 SNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQK 138
Query: 59 DLSSNKLSGSLPNLTS--QFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGP 116
+ + F L I ++ ++ I+ + + SN +
Sbjct: 139 QKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF- 197
Query: 117 IPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPS 176
+ L + + F + E+ +
Sbjct: 198 VSKAVMRLTKLRQFYMGNSPFVAENICEAW--------------ENENSEYAQQYKTEDL 243
Query: 177 DIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSL-------- 228
N+ L + + N K+P+ L L ++ ++++ N+ K
Sbjct: 244 KWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPV 303
Query: 229 --KLNEFNVSYNDL-SGPIPENLRNFPK 253
K+ + YN+L + P+ +L+ K
Sbjct: 304 GEKIQIIYIGYNNLKTFPVETSLQKMKK 331
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 2e-30
Identities = 41/294 (13%), Positives = 87/294 (29%), Gaps = 45/294 (15%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSC---VILDLSRNMISG---DISDMQNWEAN 54
+ + L ++S+ ++ S + + N I+ + +
Sbjct: 152 YDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITFVSKAVMRLTK---- 207
Query: 55 LEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLK 114
L + ++ N T + L ++V +
Sbjct: 208 LRQFYMGNSPFVAENICEA-----WENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNL 262
Query: 115 GPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHAS------------------ELLVLPS 156
+P + + +N++ N L+ + L P
Sbjct: 263 TKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPV 322
Query: 157 YPPM------ESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEY 210
+ L+ N L G LP+ G+ +L LNLA N ++ + +E
Sbjct: 323 ETSLQKMKKLGMLECLYNQLEGKLPA-FGSEIKLASLNLAYNQITEIPANFCGFTEQVEN 381
Query: 211 LDLSGNQFKGEIPDKLSL----KLNEFNVSYNDLSGPIPENLRNFPKSSFHPGN 260
L + N+ K IP+ ++ + SYN++ +N + F N
Sbjct: 382 LSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGIN 434
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 3e-29
Identities = 41/276 (14%), Positives = 94/276 (34%), Gaps = 40/276 (14%)
Query: 5 INSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISG----DISDMQNWEANLEI 57
N T LK +++ + + +++
Sbjct: 222 NICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALP----EMQL 277
Query: 58 LDLSSNKLSG------SLPNLTS--QFDRLSTFNIRNNS-VTGTLPSLLEISPRLVTLDV 108
++++ N+ L +++ I N+ T + + L+ +L L+
Sbjct: 278 INVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLEC 337
Query: 109 SSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGN 168
NQL+G +P F S + L +LNL+ N + ++ E+L + N
Sbjct: 338 LYNQLEGKLPA-FGSEIKLASLNLAYNQITEIPANFCGFTEQV---------ENLSFAHN 387
Query: 169 ALTGVLPS-DIGNMGRLRLLNLANNHLSG-------KMPSELSKLGALEYLDLSGNQFKG 220
L + D ++ + ++ + N + + K + ++LS NQ
Sbjct: 388 KLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISK 447
Query: 221 EIPDKLSL--KLNEFNVSYNDLSGPIPENLRNFPKS 254
+ S L+ N+ N L+ +L++ ++
Sbjct: 448 FPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENEN 483
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 3e-24
Identities = 47/266 (17%), Positives = 89/266 (33%), Gaps = 47/266 (17%)
Query: 6 NSTTLSVLNLSSNSLSGTLPT-----SLKSCVILDLSRNMISGDISDMQNWE-------A 53
+ + L+ + N L +P S+ +D S N I +
Sbjct: 375 FTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGI 433
Query: 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTG-------TLPSLLEISPRLVTL 106
N+ ++LS+N++S L S LS+ N+ N +T + + L ++
Sbjct: 434 NVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSI 493
Query: 107 DVSSNQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDL 165
D+ N+L D +++ L ++LS N FS P + ++S L D
Sbjct: 494 DLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGI---RNQRDA 549
Query: 166 SGNALTGVLPSDIGNMGRLR---------------------LLNLANNHLSGKMPSELSK 204
GN P I L +L++ +N S +
Sbjct: 550 QGNRTLREWPEGITLCPSLTQLQIGSNDIRKVNEKITPNISVLDIKDNPNISIDLSYVCP 609
Query: 205 LGALEYLDLSGNQFKGEIPDKLSLKL 230
L ++ + +I +L +
Sbjct: 610 YIEAGMYMLFYDKTQ-DIRGCDALDI 634
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 7e-10
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 6/77 (7%)
Query: 178 IGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKG----EIPDKLS--LKLN 231
+ + GR+ L+L SG++P + +L LE L L + K P +S +
Sbjct: 77 LNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDE 136
Query: 232 EFNVSYNDLSGPIPENL 248
+ +
Sbjct: 137 QKQKMRMHYQKTFVDYD 153
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 2e-36
Identities = 47/252 (18%), Positives = 93/252 (36%), Gaps = 12/252 (4%)
Query: 4 GINSTTLSVLNLSSNSLSGTLPTSLKSC---VILDLSRNMISGDISDM--QNWEANLEIL 58
+ + L +LNL+ N +S + +LDL N I +++ + E N+ +
Sbjct: 377 SLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLE-NIFEI 435
Query: 59 DLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTG--TLPSLLEISPRLVTLDVSSNQLKGP 116
LS NK N + L +R ++ + PS + L LD+S+N +
Sbjct: 436 YLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANI 495
Query: 117 IPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPS 176
D L L+L N + + ++ + L + L+L N +
Sbjct: 496 NDDMLEGLEKLEILDLQHNNLA-RLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVE 554
Query: 177 DIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLN---EF 233
++ L++++L N+L+ S + +L+ L+L N E
Sbjct: 555 VFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL 614
Query: 234 NVSYNDLSGPIP 245
++ +N
Sbjct: 615 DMRFNPFDCTCE 626
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 6e-35
Identities = 52/263 (19%), Positives = 98/263 (37%), Gaps = 30/263 (11%)
Query: 7 STTLSVLNLSSNSLS---GTLPTSLKSCVILDLSRNMISG----DISDMQNWEANLEILD 59
+ + V + S L+ LPT++ L+L+ N + + + L LD
Sbjct: 3 TVSHEVADCSHLKLTQVPDDLPTNITV---LNLTHNQLRRLPAANFTRYSQ----LTSLD 55
Query: 60 LSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPD 119
+ N +S P L + L N+++N ++ L L + SN ++ +
Sbjct: 56 VGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNN 115
Query: 120 NFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIG 179
F L L+LS NG S + L + ++ L LS N + + ++
Sbjct: 116 PFVKQKNLITLDLSHNGLSSTKL------GTQVQLEN---LQELLLSNNKIQALKSEELD 166
Query: 180 NMG--RLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSL-----KLNE 232
L+ L L++N + P +G L L L+ Q + +KL L +
Sbjct: 167 IFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRN 226
Query: 233 FNVSYNDLSGPIPENLRNFPKSS 255
++S + LS ++
Sbjct: 227 LSLSNSQLSTTSNTTFLGLKWTN 249
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 7e-34
Identities = 58/269 (21%), Positives = 93/269 (34%), Gaps = 29/269 (10%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTS-------LKSCVILDLSRNMISGDISDMQNWEANLEIL 58
L L+LS++ S T+ IL+L++N IS SD +W +LE+L
Sbjct: 351 GLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVL 410
Query: 59 DLSSNKLSGSLPNLT-SQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKG-- 115
DL N++ L + + + N + + P L L + LK
Sbjct: 411 DLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVD 470
Query: 116 PIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT---- 171
P F LT L+LS N + L L +E LDL N L
Sbjct: 471 SSPSPFQPLRNLTILDLSNNNIANIND------DMLEGLEK---LEILDLQHNNLARLWK 521
Query: 172 ----GVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS 227
G + + L +LNL +N L L+ +DL N +
Sbjct: 522 HANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFN 581
Query: 228 --LKLNEFNVSYNDLSGPIPENLRNFPKS 254
+ L N+ N ++ + ++
Sbjct: 582 NQVSLKSLNLQKNLITSVEKKVFGPAFRN 610
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 2e-33
Identities = 53/270 (19%), Positives = 104/270 (38%), Gaps = 24/270 (8%)
Query: 3 HGINSTTLSVLNLSSNSLSGTLPTSLKSC-----VILDLSRNMISGDISDMQNWEANLEI 57
+ +T++ L+LS++ LS T T+ +LDLS N ++ +D W LE
Sbjct: 217 LELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEY 276
Query: 58 LDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLP--SLLEISP-------RLVTLDV 108
L N + + + N++ + ++ SL +I L L++
Sbjct: 277 FFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNM 336
Query: 109 SSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGN 168
N + G + F + L L+LS + S +E V ++ P+ L+L+ N
Sbjct: 337 EDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTL-----TNETFVSLAHSPLHILNLTKN 391
Query: 169 ALTGVLPSDIGNMGRLRLLNLANNHLSGKMP-SELSKLGALEYLDLSGNQFKGEIPDKLS 227
++ + +G L +L+L N + ++ E L + + LS N++ + +
Sbjct: 392 KISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFA 451
Query: 228 L--KLNEFNVSYNDLSG--PIPENLRNFPK 253
L L + L P +
Sbjct: 452 LVPSLQRLMLRRVALKNVDSSPSPFQPLRN 481
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 2e-33
Identities = 48/264 (18%), Positives = 82/264 (31%), Gaps = 16/264 (6%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSC-----VILDLSRNMISGDISDMQNWEANLEILDL 60
L L LS+N + L L+LS N I + L L L
Sbjct: 143 QLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFL 202
Query: 61 SSNKLSGSLPNLTSQFD---RLSTFNIRNNSVTGTLPSLLE--ISPRLVTLDVSSNQLKG 115
++ +L SL + ++ N+ ++ T + L LD+S N L
Sbjct: 203 NNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNV 262
Query: 116 PIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLP 175
D+F L L N + L +S +L +
Sbjct: 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDD 322
Query: 176 SDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSL------K 229
+ L LN+ +N + G + + L L+YL LS + +
Sbjct: 323 FSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSP 382
Query: 230 LNEFNVSYNDLSGPIPENLRNFPK 253
L+ N++ N +S +
Sbjct: 383 LHILNLTKNKISKIESDAFSWLGH 406
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 1e-32
Identities = 59/268 (22%), Positives = 90/268 (33%), Gaps = 28/268 (10%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCV---ILDLSRNMISGDISDMQNWEANLEILDLSS 62
T L+ L+L SNS+ LDLS N +S Q NL+ L LS+
Sbjct: 95 FCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSN 154
Query: 63 NKLSGSLPNLTSQFD--RLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
NK+ F L + +N + P RL L +++ QL + +
Sbjct: 155 NKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEK 214
Query: 121 FFSSMALTN---LNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSD 177
+A T+ L+LS + S + + + LDLS N L V
Sbjct: 215 LCLELANTSIRNLSLSNSQLSTTSN-------TTFLGLKWTNLTMLDLSYNNLNVVGNDS 267
Query: 178 IGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPD------------K 225
+ +L L N++ L L + YL+L + K I
Sbjct: 268 FAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQW 327
Query: 226 LSLKLNEFNVSYNDLSGPIPENLRNFPK 253
L L N+ ND+ G
Sbjct: 328 LK-CLEHLNMEDNDIPGIKSNMFTGLIN 354
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 6e-32
Identities = 51/275 (18%), Positives = 94/275 (34%), Gaps = 32/275 (11%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSC---VILDLSRNMISGDISDMQNWEANLEI 57
+ G+ T L++L+LS N+L+ S L N I S + N+
Sbjct: 241 TFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRY 300
Query: 58 LDLSSNKLSGSL---------PNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDV 108
L+L + S+ L N+ +N + G ++ L L +
Sbjct: 301 LNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSL 360
Query: 109 SSNQLK-GPIPDNFFSSMALTN---LNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164
S++ + + F S+A + LNL+ N S L +E LD
Sbjct: 361 SNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIES------DAFSWLGH---LEVLD 411
Query: 165 LSGNALTGVLPSD-IGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIP 223
L N + L + + + L+ N + + + +L+ L L K +
Sbjct: 412 LGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKN-VD 470
Query: 224 DKLSL-----KLNEFNVSYNDLSGPIPENLRNFPK 253
S L ++S N+++ + L K
Sbjct: 471 SSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEK 505
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 1e-31
Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 30/263 (11%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEAN--LEILDL 60
L L+LS N LS T + L++ L LS N I S+ + AN L+ L+L
Sbjct: 119 KQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLEL 178
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEIS---PRLVTLDVSSNQLKGPI 117
SSN++ P RL + N + +L L + + L +S++QL
Sbjct: 179 SSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTS 238
Query: 118 PDNFFS--SMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLP 175
F LT L+LS N + + +L E L N + +
Sbjct: 239 NTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQL---------EYFFLEYNNIQHLFS 289
Query: 176 SDIGNMGRLRLLNLANN---------HLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKL 226
+ + +R LNL + L L LE+L++ N G +
Sbjct: 290 HSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMF 349
Query: 227 S--LKLNEFNVSYNDLSGPIPEN 247
+ + L ++S + S N
Sbjct: 350 TGLINLKYLSLSNSFTSLRTLTN 372
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 134 bits (338), Expect = 3e-33
Identities = 45/296 (15%), Positives = 87/296 (29%), Gaps = 55/296 (18%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSC---VILDLSRNMISGDISDMQNWEA--------- 53
N L+ + L + LP L L+++ N +W
Sbjct: 489 NLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGP 548
Query: 54 NLEILDLSSNKLS--------GSLPNLT---------------SQFDRLSTFNIRNNSVT 90
++I + N L + L +L+ + N +
Sbjct: 549 KIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVRHLEAFGTNVKLTDLKLDYNQIE 608
Query: 91 GTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSS--MALTNLNLSGNGFSGAIPLRSSHA 148
+ ++ L S N+LK IP+ F + + +++ S N S +
Sbjct: 609 EIPEDFCAFTDQVEGLGFSHNKLKY-IPNIFNAKSVYVMGSVDFSYNKIGS-EGRNISCS 666
Query: 149 SELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLS-------GKMPSE 201
+ + ++ LS N + + + L+NN ++
Sbjct: 667 MDDYKGIN---ASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGN 723
Query: 202 LSKLGALEYLDLSGNQFKGEIPDKLSL----KLNEFNVSYNDLSGPIPENLRNFPK 253
L +DL N+ + D L+ +VSYN S P N +
Sbjct: 724 YKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQ 777
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 4e-30
Identities = 37/269 (13%), Positives = 83/269 (30%), Gaps = 36/269 (13%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSC---VILDLSRNMISGDISDMQNWEANLEILDLSS 62
N+ ++ L+L+ G +P ++ +L + + + E ++ +
Sbjct: 321 NNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERK 380
Query: 63 NKLSGSLPNLTSQFDR------LSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGP 116
+++ + +D+ L I N + IS + + +N++
Sbjct: 381 HRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF- 439
Query: 117 IPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPS 176
I L + + + F+ E +
Sbjct: 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDW--------------EDANSDYAKQYENEEL 485
Query: 177 DIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSL-------- 228
N+ L + L N ++P L L L+ L+++ N+ K
Sbjct: 486 SWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDED 545
Query: 229 ---KLNEFNVSYNDLSG-PIPENLRNFPK 253
K+ F + YN+L P +L+ K
Sbjct: 546 TGPKIQIFYMGYNNLEEFPASASLQKMVK 574
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 2e-28
Identities = 51/259 (19%), Positives = 99/259 (38%), Gaps = 30/259 (11%)
Query: 4 GINSTTLSVLNLSSNSLSGTLP-----TSLKSCVILDLSRNMISGDISDM-----QNWEA 53
+ + L S N L +P S+ +D S N I + ++
Sbjct: 615 CAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGI 673
Query: 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVT-------GTLPSLLEISPRLVTL 106
N + LS N++ L + +ST + NN +T + + L T+
Sbjct: 674 NASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTI 733
Query: 107 DVSSNQLKGPIPDNFFSSM--ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164
D+ N+L + D+F ++ L+N+++S N FS P + ++S+L D
Sbjct: 734 DLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIR---HQRD 788
Query: 165 LSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFK-GEIP 223
GN + P+ I L L + +N + K+ +L L LD++ N ++
Sbjct: 789 AEGNRILRQWPTGITTCPSLIQLQIGSNDIR-KVDEKL--TPQLYILDIADNPNISIDVT 845
Query: 224 DKLS-LKLNEFNVSYNDLS 241
++ + + Y+
Sbjct: 846 SVCPYIEAGMYVLLYDKTQ 864
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 2e-28
Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 37/261 (14%)
Query: 6 NSTTLSVLNLSSNSLSGTLPT--SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSN 63
L +L+ N + L + L L N I D + +E L S N
Sbjct: 571 KMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHN 629
Query: 64 KLSGSLPNLTS--QFDRLSTFNIRNNSVTGTLPSLLEISP-----RLVTLDVSSNQLKGP 116
KL +PN+ + + + + N + ++ T+ +S N+++
Sbjct: 630 KLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKF 688
Query: 117 IPDNFFSSMALTNLNLSGNGFSGAIP--LRSSHASELLVLPSYPPMESLDLSGNALTGVL 174
+ F + ++ + LS N + +IP + ++DL N LT L
Sbjct: 689 PTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYL---LTTIDLRFNKLTS-L 743
Query: 175 PSDI--GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNE 232
D + L ++++ N S P++ L+ + +
Sbjct: 744 SDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR--------------- 787
Query: 233 FNVSYNDLSGPIPENLRNFPK 253
+ N + P + P
Sbjct: 788 -DAEGNRILRQWPTGITTCPS 807
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 2e-25
Identities = 38/274 (13%), Positives = 91/274 (33%), Gaps = 35/274 (12%)
Query: 5 INSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLS 61
+ N S LK ++L + D L+ L+++
Sbjct: 464 NIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIA 523
Query: 62 SNKLSG---------SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEIS--PRLVTLDVSS 110
N+ L + ++ F + N++ P+ + +L LD
Sbjct: 524 CNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEE-FPASASLQKMVKLGLLDCVH 582
Query: 111 NQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNAL 170
N+++ + F +++ LT+L L N + ++ E L S N L
Sbjct: 583 NKVR--HLEAFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQV---------EGLGFSHNKL 631
Query: 171 TGVLPS-DIGNMGRLRLLNLANNHLSGKMPSELSKLGA-----LEYLDLSGNQFKGEIPD 224
+ + ++ + ++ + N + + + + + LS N+ + +
Sbjct: 632 KYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTE 691
Query: 225 KLSL--KLNEFNVSYNDLSGPIPENLRNFPKSSF 256
+ ++ +S N ++ IPEN ++
Sbjct: 692 LFATGSPISTIILSNNLMTS-IPENSLKPKDGNY 724
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 99.6 bits (248), Expect = 5e-22
Identities = 30/270 (11%), Positives = 76/270 (28%), Gaps = 31/270 (11%)
Query: 11 SVLNLSSNSLSGTLPTSLKSCVILDLSR--NMISGDISDMQNWEANLEILDLSSNKLSGS 68
L+ + + + + ++ +M + + L L+ G
Sbjct: 279 EALDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGR 338
Query: 69 LPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM-AL 127
+P+ Q L + +S T + + + ++++ F L
Sbjct: 339 VPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRL 398
Query: 128 TNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLL 187
+L + + ++ + L + N +T + I + +L+++
Sbjct: 399 NLSDLLQDAINRNPEMKPIKKDSRISLKD----TQIGNLTNRITF-ISKAIQRLTKLQII 453
Query: 188 NLANNHLSG-------------------KMPSELSKLGALEYLDLSGNQFKGEIPDKLSL 228
AN+ + S L L ++L ++PD L
Sbjct: 454 YFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYD 513
Query: 229 --KLNEFNVSYNDLSGPIPE--NLRNFPKS 254
+L N++ N +
Sbjct: 514 LPELQSLNIACNRGISAAQLKADWTRLADD 543
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 97.6 bits (243), Expect = 2e-21
Identities = 35/257 (13%), Positives = 80/257 (31%), Gaps = 79/257 (30%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDL 60
S+ S + LS N + + + + L
Sbjct: 666 SMDDYKGINASTVTLSYNEIQKFPTELFATGS---------------------PISTIIL 704
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
S+N ++ S+P + + + L T+D+ N+L + D+
Sbjct: 705 SNNLMT-SIP----------------ENSLKPKDGNYKNTYLLTTIDLRFNKLTS-LSDD 746
Query: 121 FFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN 180
F ++ L L ++D+S N + P+ N
Sbjct: 747 FRATT-LPYL------------------------------SNMDVSYNCFSS-FPTQPLN 774
Query: 181 MGRLRLLNL------ANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFN 234
+L+ + N + + P+ ++ +L L + N + ++ +KL+ +L +
Sbjct: 775 SSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIR-KVDEKLTPQLYILD 833
Query: 235 VSYNDL-SGPIPENLRN 250
++ N S +
Sbjct: 834 IADNPNISIDVTSVCPY 850
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 59.5 bits (144), Expect = 2e-09
Identities = 23/194 (11%), Positives = 58/194 (29%), Gaps = 23/194 (11%)
Query: 63 NKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFF 122
++ L +Q R +F + +N +T + + + + I D
Sbjct: 225 SQSGIKRSELETQSVRGESFTVIDNKLT-----------KDANVPIQLKETAEYIKDYKA 273
Query: 123 SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMG 182
L+ + + H+ + + + D+ N G
Sbjct: 274 LKAIWEALDGKNWRYYSGTINNTIHSLNW----------NFNKELDMWGDQPGVDLDNNG 323
Query: 183 RLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKG--EIPDKLSLKLNEFNVSYNDL 240
R+ L+LA G++P + +L L+ L + + L + + +
Sbjct: 324 RVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRI 383
Query: 241 SGPIPENLRNFPKS 254
+ ++ +
Sbjct: 384 RMHYKKMFLDYDQR 397
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 9e-33
Identities = 56/247 (22%), Positives = 98/247 (39%), Gaps = 15/247 (6%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEA--NLEI 57
++ L L L+ N S + +L S LDLSRN +S + +L
Sbjct: 321 QFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRH 380
Query: 58 LDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLP-SLLEISPRLVTLDVSSNQLKGP 116
LDLS N + + L + +++++ S +L+ LD+S K
Sbjct: 381 LDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKID 439
Query: 117 IPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPS 176
F +L L ++GN F ++ + + LDLS L +
Sbjct: 440 FDGIFLGLTSLNTLKMAGNSFKDNTL-----SNVFANTTN---LTFLDLSKCQLEQISWG 491
Query: 177 DIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSL--KLNEFN 234
+ RL+LLN+++N+L S ++L +L LD S N+ + L FN
Sbjct: 492 VFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFN 551
Query: 235 VSYNDLS 241
++ N ++
Sbjct: 552 LTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 1e-30
Identities = 47/256 (18%), Positives = 78/256 (30%), Gaps = 18/256 (7%)
Query: 4 GINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSN 63
L++ L L L L+ N S + +L LDLS N
Sbjct: 303 VPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVAL--PSLSYLDLSRN 360
Query: 64 KLSGSLPNLTSQFD--RLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNF 121
LS S S L ++ N + + L LD + LK +
Sbjct: 361 ALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSA 419
Query: 122 FSSMA-LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDI-G 179
F S+ L L++S + L +L ++GN+ S++
Sbjct: 420 FLSLEKLLYLDISYTNTKIDFDGIFLGLTSL---------NTLKMAGNSFKDNTLSNVFA 470
Query: 180 NMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSY 237
N L L+L+ L L L+ L++S N + L+ + S+
Sbjct: 471 NTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSF 530
Query: 238 NDLSGPIPENLRNFPK 253
N +
Sbjct: 531 NRIETSKGILQHFPKS 546
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 8e-25
Identities = 43/262 (16%), Positives = 88/262 (33%), Gaps = 26/262 (9%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEI 57
+ G+ T+ L+ + L + + L+ I ++ +
Sbjct: 254 IMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKH--FKWQS 311
Query: 58 LDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPI 117
L + +L P L L + + N + + + P L LD+S N L
Sbjct: 312 LSIIRCQLK-QFPTLD--LPFLKSLTLTMNKGSISFKKVA--LPSLSYLDLSRNALSFSG 366
Query: 118 PDNF--FSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLP 175
++ + +L +L+LS NG ++ + L ++ LD + L V
Sbjct: 367 CCSYSDLGTNSLRHLDLSFNGA-------IIMSANFMGLEE---LQHLDFQHSTLKRVTE 416
Query: 176 -SDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPD---KLSLKLN 231
S ++ +L L+++ + L +L L ++GN FK + L
Sbjct: 417 FSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLT 476
Query: 232 EFNVSYNDLSGPIPENLRNFPK 253
++S L +
Sbjct: 477 FLDLSKCQLEQISWGVFDTLHR 498
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 5e-24
Identities = 41/278 (14%), Positives = 78/278 (28%), Gaps = 30/278 (10%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSC---VILDLSRNMISG-DISDMQNWEANLEILDLS 61
T+L L L+ + L+++ N I + + NL +DLS
Sbjct: 102 GLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLS 161
Query: 62 SNKLSG----SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPI 117
N + L L + ++ N + + +L L + N I
Sbjct: 162 YNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQ-GIKLHELTLRGNFNSSNI 220
Query: 118 PDNFFSSMA-LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPS 176
++A L L F L S + L ++ L+
Sbjct: 221 MKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVT-IDEFRLTYTNDFSDDIV 279
Query: 177 DIGNMGRLRLLNLANNHLSGKMPS-------------------ELSKLGALEYLDLSGNQ 217
+ + ++LA + L L+ L L+ N+
Sbjct: 280 KFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNK 339
Query: 218 FKGEIPDKLSLKLNEFNVSYNDLSGPIPENLRNFPKSS 255
L+ ++S N LS + + +S
Sbjct: 340 GSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNS 377
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 7e-24
Identities = 48/255 (18%), Positives = 78/255 (30%), Gaps = 13/255 (5%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCV---ILDLSRNMISGDISDMQNWEANLEILDLSS 62
LS L L+ N + P S L ++ S L+ L+++
Sbjct: 78 GLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAH 137
Query: 63 NKLSG-SLPNLTSQFDRLSTFNIRNNSVTG----TLPSLLEISPRLVTLDVSSNQLKGPI 117
N + LP S L ++ N + L L E ++LD+S N + I
Sbjct: 138 NFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDF-I 196
Query: 118 PDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSD 177
D F + L L L GN S I L + E D L PS
Sbjct: 197 QDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDE--RNLEIFEPSI 254
Query: 178 IGNMGRLRL--LNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNV 235
+ + + + L + + L + + L+G K K ++
Sbjct: 255 MEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSI 314
Query: 236 SYNDLSGPIPENLRN 250
L +L
Sbjct: 315 IRCQLKQFPTLDLPF 329
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 3e-23
Identities = 47/267 (17%), Positives = 79/267 (29%), Gaps = 34/267 (12%)
Query: 7 STTLSVLNLSSNSLS---GTLPTSLKSCVILDLSRNMIS----GDISDMQNWEANLEILD 59
LS +P+S K+ +DLS N + S+ L+ LD
Sbjct: 10 VVPNITYQCMDQKLSKVPDDIPSSTKN---IDLSFNPLKILKSYSFSNFSE----LQWLD 62
Query: 60 LSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPD 119
LS ++ LS + N + P L L +L
Sbjct: 63 LSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESF 122
Query: 120 NFFSSMALTNLNLSGNGFSGAIPLRS-SHASELLVLPSYPPMESLDLSGNALTGVLPSDI 178
+ L LN++ N S+ + L +DLS N + + +D+
Sbjct: 123 PIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNL---------VHVDLSYNYIQTITVNDL 173
Query: 179 GNMGRLRL----LNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFN 234
+ L+++ N + + + + L L L GN I L +
Sbjct: 174 QFLRENPQVNLSLDMSLNPID-FIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLH 232
Query: 235 V---SYNDLSGPIPENLRNFPKSSFHP 258
V + NL F S
Sbjct: 233 VHRLILGEFKDER--NLEIFEPSIMEG 257
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 4e-32
Identities = 62/261 (23%), Positives = 102/261 (39%), Gaps = 28/261 (10%)
Query: 8 TTLSVLNLSSNSLSGTLPTSLKSC---VILDLSRNMISGDISDMQNWE-ANLEILDLSSN 63
+TL L LS+N S + L + N ++ NL LDLS +
Sbjct: 301 STLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHD 360
Query: 64 KLS------GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPI 117
+ L NL+ L + N+ N + P+L LD++ +LK
Sbjct: 361 DIETSDCCNLQLRNLSH----LQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKD 416
Query: 118 PDNFFSSMA-LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGV--- 173
+ F ++ L LNLS + L S LP+ ++ L+L GN
Sbjct: 417 AQSPFQNLHLLKVLNLSHSL------LDISSEQLFDGLPA---LQHLNLQGNHFPKGNIQ 467
Query: 174 LPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNE 232
+ + +GRL +L L+ LS + L + ++DLS N+ + LS LK
Sbjct: 468 KTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIY 527
Query: 233 FNVSYNDLSGPIPENLRNFPK 253
N++ N +S +P L +
Sbjct: 528 LNLASNHISIILPSLLPILSQ 548
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 1e-30
Identities = 45/260 (17%), Positives = 82/260 (31%), Gaps = 17/260 (6%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSC-----VILDLSRNMISGDISDMQNWEANL 55
+ +L + P + ++L ++ S+ + + L
Sbjct: 221 GLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGL 280
Query: 56 EILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKG 115
+ LDL++ LS LP+ L + N P L L + N +
Sbjct: 281 QELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRL 339
Query: 116 PIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVL 174
+ ++ L L+LS + + +L L ++SL+LS N +
Sbjct: 340 ELGTGCLENLENLRELDLSHDDIETS----DCCNLQLRNLSH---LQSLNLSYNEPLSLK 392
Query: 175 PSDIGNMGRLRLLNLANNHLSGKMP-SELSKLGALEYLDLSGNQFKGEIPDKLSL--KLN 231
+L LL+LA L K S L L+ L+LS + L
Sbjct: 393 TEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQ 452
Query: 232 EFNVSYNDLSGPIPENLRNF 251
N+ N + +
Sbjct: 453 HLNLQGNHFPKGNIQKTNSL 472
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 4e-30
Identities = 55/268 (20%), Positives = 97/268 (36%), Gaps = 28/268 (10%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCV---ILDLSRNMISGDISDMQNWEANLEILDLSS 62
+ L L L++N L T+L L + IS + + LE L L S
Sbjct: 79 SQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGS 138
Query: 63 NKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRL--VTLDVSSNQLKGPIPDN 120
N +S ++L + +NN++ + + ++L+++ N + G I
Sbjct: 139 NHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG-IEPG 197
Query: 121 FFSSMALTNLNLSGNGFSGAIP--LRSSHASELLVL-----------------PSYPPME 161
F S +LN G I L++S L + +E
Sbjct: 198 AFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVE 257
Query: 162 SLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGE 221
S++L + + + L+ L+L HLS ++PS L L L+ L LS N+F+
Sbjct: 258 SINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENL 316
Query: 222 IPDKLS--LKLNEFNVSYNDLSGPIPEN 247
S L ++ N +
Sbjct: 317 CQISASNFPSLTHLSIKGNTKRLELGTG 344
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 4e-28
Identities = 42/256 (16%), Positives = 71/256 (27%), Gaps = 17/256 (6%)
Query: 7 STTLSVLNLSSNSLSGTLPTSLKSC---VILDLSRNMISGDISDMQNWEANLEILDLSSN 63
+ L S N L T+ LDL+R I D + L+ L L++N
Sbjct: 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTAN 91
Query: 64 KLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFS 123
L S L ++ L L +L + SN + F
Sbjct: 92 PLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP 151
Query: 124 SMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGR 183
+ L L+ N S + L SL+L+GN + G + +
Sbjct: 152 TEKLKVLDFQNNAIHYLSKEDMSSLQQATNL-------SLNLNGNDIAG-IEPGAFDSAV 203
Query: 184 LRLLNLANNHLSGKMPSELS--KLGALEYLDLSGNQFKGEIPDKLS----LKLNEFNVSY 237
+ LN + L + +L + P + + N+
Sbjct: 204 FQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQK 263
Query: 238 NDLSGPIPENLRNFPK 253
+ F
Sbjct: 264 HYFFNISSNTFHCFSG 279
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 7e-27
Identities = 61/280 (21%), Positives = 99/280 (35%), Gaps = 30/280 (10%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTS----LKSCVILDLSRNMISGDISDMQNWE--ANLEILD 59
N +L+ L++ N+ L T L++ LDLS + I ++L+ L+
Sbjct: 323 NFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLN 382
Query: 60 LSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLP-SLLEISPRLVTLDVSSNQLKGPIP 118
LS N+ + +L ++ + S + L L++S + L
Sbjct: 383 LSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSE 442
Query: 119 DNFFSSMALTNLNLSGNGFSGAIPLRS---SHASELLVL---------------PSYPPM 160
F AL +LNL GN F ++ L +L S M
Sbjct: 443 QLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMM 502
Query: 161 ESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKG 220
+DLS N LT + ++ + L NLA+NH+S +PS L L ++L N
Sbjct: 503 NHVDLSHNRLTSSSIEALSHLKGIYL-NLASNHISIILPSLLPILSQQRTINLRQNPLDC 561
Query: 221 EIPDK-LSLKLNEFNVSYNDLSGPI---PENLRNFPKSSF 256
+ E D + P LR S
Sbjct: 562 TCSNIYFLEWYKENMQKLEDTEDTLCENPPLLRGVRLSDV 601
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 5e-26
Identities = 53/285 (18%), Positives = 87/285 (30%), Gaps = 47/285 (16%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSS 62
L L +S K+ L L N IS L++LD +
Sbjct: 103 GPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQN 162
Query: 63 NKLS-------GSLPNLTS------------------QFDRLSTFNIRNNSVTGTLPSLL 97
N + SL T+ + N + L
Sbjct: 163 NAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGL 222
Query: 98 EIS--PRLVTLDVSSNQLKGPIPDNF--FSSMALTNLNLSGNGFSGAIPLRSSHASELLV 153
+ S L + P F M++ ++NL + F S L
Sbjct: 223 KNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGL-- 280
Query: 154 LPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDL 213
+ LDL+ L+ LPS + + L+ L L+ N S +L +L +
Sbjct: 281 -------QELDLTATHLSE-LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSI 332
Query: 214 SGNQFKGEIPD---KLSLKLNEFNVSYNDL--SGPIPENLRNFPK 253
GN + E+ + L E ++S++D+ S LRN
Sbjct: 333 KGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSH 377
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 4e-24
Identities = 46/259 (17%), Positives = 94/259 (36%), Gaps = 21/259 (8%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSCVI----LDLSRNMISGDISDMQNWEANLE 56
+ + T LNL+ N ++G P + S V ++N++ + +L
Sbjct: 172 DMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLW 231
Query: 57 ILDLSSNKLSGSLPNLTSQFDRLS--TFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLK 114
+ P + +S + N++ + + L LD+++ L
Sbjct: 232 LGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS 291
Query: 115 GPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVL 174
+P L L LS N F + +S+ L L + GN L
Sbjct: 292 E-LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSL---------THLSIKGNTKRLEL 341
Query: 175 PSD-IGNMGRLRLLNLANNHL--SGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LK 229
+ + N+ LR L+L+++ + S +L L L+ L+LS N+ + +
Sbjct: 342 GTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQ 401
Query: 230 LNEFNVSYNDLSGPIPENL 248
L ++++ L ++
Sbjct: 402 LELLDLAFTRLKVKDAQSP 420
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 1e-16
Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 14/178 (7%)
Query: 81 TFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGA 140
T+N N + +P + L+ S N L F + LT L+L+
Sbjct: 16 TYNCENLGLN-EIPG--TLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQ---- 68
Query: 141 IPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPS 200
+ H +++L L+ N L + + + L+ L +S
Sbjct: 69 --IYWIHEDTFQSQHR---LDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFI 123
Query: 201 ELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNFPKSSF 256
L LE L L N K KL + N + E++ + +++
Sbjct: 124 PLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATN 181
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 161 ESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKG 220
++ + L + P + N L + N L + S+L L +LDL+ Q
Sbjct: 15 KTYNCENLGLNEI-PGTLPNS--TECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW 71
Query: 221 EIPDKLS--LKLNEFNVSYNDLSGPIPENLRNFPK 253
D +L+ ++ N L L
Sbjct: 72 IHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKA 106
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 1e-27
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 26/245 (10%)
Query: 8 TTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
TTL L++SSN +S L + L + N IS DI+ + NL+ L L+ N+L
Sbjct: 177 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQIS-DITPLGILT-NLDELSLNGNQLK 234
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM- 125
+ L + L+ ++ NN ++ L L + +L L + +NQ+ P + +
Sbjct: 235 -DIGTL-ASLTNLTDLDLANNQISN-LAPLSGL-TKLTELKLGANQISNISP---LAGLT 287
Query: 126 ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLR 185
ALTNL L+ N P+ + L + + L L N ++ + P + ++ +L+
Sbjct: 288 ALTNLELNENQLEDISPISN--------LKN---LTYLTLYFNNISDISP--VSSLTKLQ 334
Query: 186 LLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIP 245
L NN +S S L+ L + +L NQ P ++ + ++ +
Sbjct: 335 RLFFYNNKVSD--VSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPV 392
Query: 246 ENLRN 250
N
Sbjct: 393 NYKAN 397
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 7e-25
Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 26/250 (10%)
Query: 6 NSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK 64
T L L ++N +S P L + L L+ N + DI + + NL LDL++N+
Sbjct: 197 KLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLK-DIGTLASLT-NLTDLDLANNQ 254
Query: 65 LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSS 124
+S +L L S +L+ + N ++ P L L L+++ NQL+ P + +
Sbjct: 255 IS-NLAPL-SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKN 310
Query: 125 MALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRL 184
LT L L N S P+ S ++L + L N ++ S + N+ +
Sbjct: 311 --LTYLTLYFNNISDISPV--SSLTKL---------QRLFFYNNKVSD--VSSLANLTNI 355
Query: 185 RLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPI 244
L+ +N +S + L+ L + L L+ + + + ++ N N I
Sbjct: 356 NWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKAN-VSIPNTVKNVTGALI 412
Query: 245 -PENLRNFPK 253
P + +
Sbjct: 413 APATISDGGS 422
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 1e-24
Identities = 69/272 (25%), Positives = 113/272 (41%), Gaps = 43/272 (15%)
Query: 1 SIHGINS-TTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEIL 58
SI G+ L+ +N S+N L+ P +L V + ++ N I+ DI+ + N NL L
Sbjct: 60 SIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIA-DITPLANL-TNLTGL 117
Query: 59 DLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVT-----GTLPSLLEIS------------- 100
L +N+++ + L L+ + +N+++ L SL ++S
Sbjct: 118 TLFNNQIT-DIDPL-KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 175
Query: 101 -PRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPP 159
L LD+SSN++ L +L + N S PL L +
Sbjct: 176 LTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITPLGI--------LTN--- 222
Query: 160 MESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFK 219
++ L L+GN L + + ++ L L+LANN +S + LS L L L L NQ
Sbjct: 223 LDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQIS 278
Query: 220 GEIPDKLSLKLNEFNVSYNDLSGPIP-ENLRN 250
P L ++ N L P NL+N
Sbjct: 279 NISPLAGLTALTNLELNENQLEDISPISNLKN 310
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 2e-24
Identities = 73/249 (29%), Positives = 99/249 (39%), Gaps = 30/249 (12%)
Query: 6 NSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK 64
N T L+ L LSSN++S + L S L + D+ + N LE LD+SSNK
Sbjct: 132 NLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT--DLKPLANLT-TLERLDISSNK 188
Query: 65 LSG--SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFF 122
+S L LT+ L + NN ++ P L I L L ++ NQLK
Sbjct: 189 VSDISVLAKLTN----LESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLA 240
Query: 123 SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMG 182
S LT+L+L+ N S PL L + L L N ++ + S + +
Sbjct: 241 SLTNLTDLDLANNQISNLAPLSG--------LTK---LTELKLGANQISNI--SPLAGLT 287
Query: 183 RLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSG 242
L L L N L S +S L L YL L N P KL N +S
Sbjct: 288 ALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSD 345
Query: 243 PIP-ENLRN 250
NL N
Sbjct: 346 VSSLANLTN 354
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 1e-21
Identities = 49/246 (19%), Positives = 94/246 (38%), Gaps = 29/246 (11%)
Query: 8 TTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
T L+ L+L++N +S P + L L L N IS +IS + L L+L+ N+L
Sbjct: 243 TNLTDLDLANNQISNLAPLSGLTKLTELKLGANQIS-NISPLAGLT-ALTNLELNENQLE 300
Query: 67 G--SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSS 124
+ NL + L+ + N+++ P + +L L +N++ ++
Sbjct: 301 DISPISNLKN----LTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVSSLANLTN 354
Query: 125 MALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRL 184
+ L+ N S PL ++ + + L L+ A T + N+
Sbjct: 355 --INWLSAGHNQISDLTPL--ANLTRI---------TQLGLNDQAWTNAPVNYKANVSIP 401
Query: 185 RLLNLANNHLSGKMPSELSKLGALEYLDLSGNQ--FKGEIPDKLSLKLNEFNVSYNDLSG 242
+ L P+ +S G+ D++ N + E+ S + SG
Sbjct: 402 NTVKNVTGALIA--PATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVT-IGKGTTTFSG 458
Query: 243 PIPENL 248
+ + L
Sbjct: 459 TVTQPL 464
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 6e-21
Identities = 50/245 (20%), Positives = 95/245 (38%), Gaps = 27/245 (11%)
Query: 9 TLSVLNLSSNSLSGTLP--TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
L ++ ++ + T+L + L + ++ +S Q + L +
Sbjct: 2 PLGSATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK 59
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA 126
S+ + + L+ N NN +T P L+ +LV + +++NQ+ P ++
Sbjct: 60 -SIDGV-EYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTN-- 113
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRL 186
LT L L N + PL++ L + + L+LS N ++ + S + + L+
Sbjct: 114 LTGLTLFNNQITDIDPLKN--------LTN---LNRLELSSNTISDI--SALSGLTSLQQ 160
Query: 187 LNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIP- 245
L+ N L+ L LE LD+S N+ L + N +S P
Sbjct: 161 LSFGNQVTD---LKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPL 217
Query: 246 ENLRN 250
L N
Sbjct: 218 GILTN 222
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-27
Identities = 53/250 (21%), Positives = 104/250 (41%), Gaps = 28/250 (11%)
Query: 6 NSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK 64
N T L L L+ +++S P +L L+L N D+S + N L L ++ +K
Sbjct: 108 NLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSDLSPLSNMT-GLNYLTVTESK 166
Query: 65 LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSS 124
+ + + + L + ++ N + + L + L NQ+ P ++
Sbjct: 167 VK-DVTPI-ANLTDLYSLSLNYNQIED-ISPLASL-TSLHYFTAYVNQITDITP---VAN 219
Query: 125 M-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGR 183
M L +L + N + PL + L L L++ N ++ + + + ++ +
Sbjct: 220 MTRLNSLKIGNNKITDLSPL-----ANLSQL------TWLEIGTNQISDI--NAVKDLTK 266
Query: 184 LRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSL--KLNEFNVSYNDLS 241
L++LN+ +N +S S L+ L L L L+ NQ E + + L +S N ++
Sbjct: 267 LKMLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHIT 324
Query: 242 GPIP-ENLRN 250
P +L
Sbjct: 325 DIRPLASLSK 334
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-26
Identities = 50/246 (20%), Positives = 98/246 (39%), Gaps = 26/246 (10%)
Query: 8 TTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
L S++ + L+S L ++ ++ I ++ NLE L+L+ N+++
Sbjct: 22 AEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVA-SIQGIEYLT-NLEYLNLNGNQIT 79
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA 126
+ L S +L+ I N +T + +L + L L ++ + + P +
Sbjct: 80 -DISPL-SNLVKLTNLYIGTNKIT-DISALQNL-TNLRELYLNEDNISDISPLANLTK-- 133
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRL 186
+ +LNL N + S L + + L ++ + + V + I N+ L
Sbjct: 134 MYSLNLGANHNLSDL-------SPLSNMTG---LNYLTVTESKVKDV--TPIANLTDLYS 181
Query: 187 LNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIP-DKLSLKLNEFNVSYNDLSGPIP 245
L+L N + S L+ L +L Y NQ P ++ +LN + N ++ P
Sbjct: 182 LSLNYNQIED--ISPLASLTSLHYFTAYVNQITDITPVANMT-RLNSLKIGNNKITDLSP 238
Query: 246 -ENLRN 250
NL
Sbjct: 239 LANLSQ 244
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 5e-24
Identities = 47/244 (19%), Positives = 90/244 (36%), Gaps = 26/244 (10%)
Query: 10 LSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGS 68
+ L ++ P L + L + ++ ++ Q ++ L ++ K++ S
Sbjct: 2 AATLATLPAPINQIFPDADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVA-S 58
Query: 69 LPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALT 128
+ + L N+ N +T P L +L L + +N++ + L
Sbjct: 59 IQGI-EYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKIT--DISALQNLTNLR 113
Query: 129 NLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLN 188
L L+ + S PL + L M SL+L N S + NM L L
Sbjct: 114 ELYLNEDNISDISPLAN--------LTK---MYSLNLGANHNLS-DLSPLSNMTGLNYLT 161
Query: 189 LANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIP-DKLSLKLNEFNVSYNDLSGPIP-E 246
+ + + + ++ L L L L+ NQ + P L+ L+ F N ++ P
Sbjct: 162 VTESKVKD--VTPIANLTDLYSLSLNYNQIEDISPLASLT-SLHYFTAYVNQITDITPVA 218
Query: 247 NLRN 250
N+
Sbjct: 219 NMTR 222
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 2e-26
Identities = 55/258 (21%), Positives = 95/258 (36%), Gaps = 37/258 (14%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCV---ILDLSRNMIS----GDISDMQNWEANLEIL 58
N + ++ +SL L + +S LDLS N +S D++ LE+L
Sbjct: 8 NGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFT----KLELL 63
Query: 59 DLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIP 118
+LSSN L +L L T ++ NN V L P + TL ++N + +
Sbjct: 64 NLSSNVLY-ETLDL-ESLSTLRTLDLNNNYVQ-ELLVG----PSIETLHAANNNISR-VS 115
Query: 119 DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGV-LPSD 177
+ N+ L+ N + + ++ LDL N + V
Sbjct: 116 CSRGQG--KKNIYLANN------KITMLRDLDEGCRSR---VQYLDLKLNEIDTVNFAEL 164
Query: 178 IGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNV 235
+ L LNL N + + ++ L+ LDLS N+ + + + ++
Sbjct: 165 AASSDTLEHLNLQYNFIY-DVKGQVV-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISL 221
Query: 236 SYNDLSGPIPENLRNFPK 253
N L I + LR
Sbjct: 222 RNNKLVL-IEKALRFSQN 238
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 1e-25
Identities = 52/246 (21%), Positives = 91/246 (36%), Gaps = 35/246 (14%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCV---ILDLSRNMISGDISDMQNWEANLEILDLSS 62
++ + L+LS N LS L +L+LS N++ + D+++ L LDL++
Sbjct: 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLY-ETLDLESLS-TLRTLDLNN 89
Query: 63 NKLS--GSLPNLT--------------SQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTL 106
N + P++ S+ + NN +T R+ L
Sbjct: 90 NYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYL 149
Query: 107 DVSSNQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDL 165
D+ N++ +S L +LNL N + +V +++LDL
Sbjct: 150 DLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVK-------GQVVFAK---LKTLDL 198
Query: 166 SGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDK 225
S N L + + + + ++L NN L + L LE+ DL GN F
Sbjct: 199 SSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRD 256
Query: 226 LSLKLN 231
K
Sbjct: 257 FFSKNQ 262
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 6e-18
Identities = 43/230 (18%), Positives = 87/230 (37%), Gaps = 24/230 (10%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMIS----GDISDMQNWEANLEILDLS 61
++ L+ ++N++S + + + L+ N I+ D ++ LDL
Sbjct: 97 VGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRS----RVQYLDLK 152
Query: 62 SNKLSG-SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
N++ + L + D L N++ N + + + +L TLD+SSN+L +
Sbjct: 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQVVF-AKLKTLDLSSNKLAF-MGPE 209
Query: 121 FFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN 180
F S+ +T ++L N I L + +E DL GN
Sbjct: 210 FQSAAGVTWISLRNNKLV-LIE------KALRFSQN---LEHFDLRGNGFHC-GTLRDFF 258
Query: 181 MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKL 230
R+ +A + K+ + + + L G ++P + +L
Sbjct: 259 SKNQRVQTVAKQTVK-KLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRL 307
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 1e-15
Identities = 39/187 (20%), Positives = 70/187 (37%), Gaps = 18/187 (9%)
Query: 68 SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM-A 126
++ + +R + ++S+ L SL + + + LD+S N L I +
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQ-ISAADLAPFTK 59
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELL--------VLPSYPPMESLDLSGNALTGVLPSDI 178
L LNLS N + L S L L P +E+L + N ++ +
Sbjct: 60 LELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNIS-RVSCSR 118
Query: 179 GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSL----KLNEFN 234
G + + LANN ++ + ++YLDL N+ + L N
Sbjct: 119 GQ--GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID-TVNFAELAASSDTLEHLN 175
Query: 235 VSYNDLS 241
+ YN +
Sbjct: 176 LQYNFIY 182
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 106 bits (265), Expect = 2e-24
Identities = 68/269 (25%), Positives = 108/269 (40%), Gaps = 46/269 (17%)
Query: 8 TTLSVLNLSSNSLSGTLPTSL-KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
+VLN+ + L+ TLP L L + N +++ + L L++S N+L+
Sbjct: 40 NGNAVLNVGESGLT-TLPDCLPAHITTLVIPDN----NLTSLPALPPELRTLEVSGNQLT 94
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA 126
SLP L LS F+ LP+L L L + NQL +P
Sbjct: 95 -SLPVLPPGLLELSIFSNPLTH----LPALPS---GLCKLWIFGNQLTS-LPVLPPG--- 142
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELLV-------LPSYPP-MESLDLSGNALTGVLPSDI 178
L L++S N + ++P S +L LP P ++ L +S N L LP+
Sbjct: 143 LQELSVSDNQLA-SLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLA-SLPTLP 200
Query: 179 GNMGRLRLLNLANNHLSGKMPSELSKL--------------GALEYLDLSGNQFKGEIPD 224
+ +L N L +PS L +L L+ L +SGN+ +P
Sbjct: 201 SELYKLWAYNNRLTSLP-ALPSGLKELIVSGNRLTSLPVLPSELKELMVSGNRLT-SLPM 258
Query: 225 KLSLKLNEFNVSYNDLSGPIPENLRNFPK 253
S L +V N L+ +PE+L +
Sbjct: 259 LPS-GLLSLSVYRNQLTR-LPESLIHLSS 285
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 1e-23
Identities = 62/243 (25%), Positives = 97/243 (39%), Gaps = 35/243 (14%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKL 65
LS+ + L LP+ L L + N ++ + L+ L +S N+L
Sbjct: 102 GLLELSIFSNPLTHLP-ALPSGLCK---LWIFGN----QLTSLPVLPPGLQELSVSDNQL 153
Query: 66 SGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM 125
+ SLP L S+ +L NN +T +LP L L L VS NQL +P
Sbjct: 154 A-SLPALPSELCKL---WAYNNQLT-SLPMLP---SGLQELSVSDNQLAS-LPTLPSE-- 202
Query: 126 ALTNLNLSGNGFSGAIP-----LRSSHAS--ELLVLPSYPP-MESLDLSGNALTGVLPSD 177
L L N + ++P L+ S L LP P ++ L +SGN LT LP
Sbjct: 203 -LYKLWAYNNRLT-SLPALPSGLKELIVSGNRLTSLPVLPSELKELMVSGNRLTS-LPML 259
Query: 178 IGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSY 237
L L++ N L+ ++P L L + ++L GN E + ++
Sbjct: 260 PSG---LLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLS-ERTLQALREITSAPGYS 314
Query: 238 NDL 240
+
Sbjct: 315 GPI 317
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 90.3 bits (224), Expect = 3e-19
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 23/204 (11%)
Query: 51 WEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSS 110
+L++ + L+ +LP+ ++T I +N++T +LP+L P L TL+VS
Sbjct: 38 LNNGNAVLNVGESGLT-TLPD--CLPAHITTLVIPDNNLT-SLPALP---PELRTLEVSG 90
Query: 111 NQLKGPIPDNFFSSMALTNLNLSGNGFSGAIP-LRSSHAS--ELLVLPSYPP-MESLDLS 166
NQL +P + L+ + L +L LP PP ++ L +S
Sbjct: 91 NQLTS-LPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVS 149
Query: 167 GNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKL 226
N L LP+ L L NN L+ +P L+ L +S NQ +P
Sbjct: 150 DNQLA-SLPALPSE---LCKLWAYNNQLT-SLPML---PSGLQELSVSDNQLA-SLPTLP 200
Query: 227 SLKLNEFNVSYNDLSGPIPENLRN 250
S +L + N L+ +P
Sbjct: 201 S-ELYKLWAYNNRLT-SLPALPSG 222
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 88.0 bits (218), Expect = 2e-18
Identities = 54/249 (21%), Positives = 93/249 (37%), Gaps = 27/249 (10%)
Query: 8 TTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSG 67
+ L L + N L+ +LP L +S N ++ + + L L +N+L+
Sbjct: 121 SGLCKLWIFGNQLT-SLPVLPPGLQELSVSDN----QLASLPALPSELCKLWAYNNQLT- 174
Query: 68 SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMAL 127
SLP L L ++ +N + +LP+L L L +N+L +P L
Sbjct: 175 SLPML---PSGLQELSVSDNQLA-SLPTLP---SELYKLWAYNNRLT-SLPALPSG---L 223
Query: 128 TNLNLSGNGFSGAIP-----LRSSHASE--LLVLPSYPP-MESLDLSGNALTGVLPSDIG 179
L +SGN + ++P L+ S L LP P + SL + N LT LP +
Sbjct: 224 KELIVSGNRLT-SLPVLPSELKELMVSGNRLTSLPMLPSGLLSLSVYRNQLT-RLPESLI 281
Query: 180 NMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYND 239
++ +NL N LS + L ++ + +F + +
Sbjct: 282 HLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADW 341
Query: 240 LSGPIPENL 248
L
Sbjct: 342 LVPAREGEP 350
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 3e-24
Identities = 55/258 (21%), Positives = 97/258 (37%), Gaps = 37/258 (14%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCV---ILDLSRNMIS----GDISDMQNWEANLEIL 58
N + ++ +SL L + +S LDLS N +S D++ LE+L
Sbjct: 8 NGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFT----KLELL 63
Query: 59 DLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIP 118
+LSSN L +L L T ++ NN V L P + TL ++N + +
Sbjct: 64 NLSSNVLY-ETLDL-ESLSTLRTLDLNNNYVQ-ELLVG----PSIETLHAANNNISR-VS 115
Query: 119 DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSD- 177
+ N+ L+ N + + ++ LDL N + V ++
Sbjct: 116 CSRGQG--KKNIYLANN------KITMLRDLDEGCRSR---VQYLDLKLNEIDTVNFAEL 164
Query: 178 IGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSL--KLNEFNV 235
+ L LNL N + + ++ L+ LDLS N+ + + + ++
Sbjct: 165 AASSDTLEHLNLQYNFIY-DVKGQVV-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISL 221
Query: 236 SYNDLSGPIPENLRNFPK 253
N L I + LR
Sbjct: 222 RNNKLVL-IEKALRFSQN 238
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 91.1 bits (226), Expect = 1e-19
Identities = 41/252 (16%), Positives = 87/252 (34%), Gaps = 16/252 (6%)
Query: 8 TTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSG 67
++ L+ ++N++S + + + L+ N I+ + + ++ LDL N++
Sbjct: 99 PSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT 158
Query: 68 -SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA 126
+ L + D L N++ N + + + +L TLD+SSN+L + F S+
Sbjct: 159 VNFAELAASSDTLEHLNLQYNFIY-DVKGQVVF-AKLKTLDLSSNKLAF-MGPEFQSAAG 215
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRL 186
+T ++L N I L + +E DL GN D R+
Sbjct: 216 VTWISLRNNKLV-LIE------KALRFSQN---LEHFDLRGNGFHCGTLRDF-FSKNQRV 264
Query: 187 LNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPE 246
+A + + + ++P + +L + L
Sbjct: 265 QTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCE-DLPAPFADRLIALKRKEHALLSGQGS 323
Query: 247 NLRNFPKSSFHP 258
+
Sbjct: 324 ETERLECERENQ 335
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 82.2 bits (203), Expect = 9e-17
Identities = 41/246 (16%), Positives = 74/246 (30%), Gaps = 26/246 (10%)
Query: 8 TTLSVLNLSSNSLS----GTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSN 63
+ + L+L N + L S + L+L N I D+ + L+ LDLSSN
Sbjct: 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQVVFA-KLKTLDLSSN 201
Query: 64 KLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFS 123
KL+ + ++ ++RNN + + L S L D+ N +FFS
Sbjct: 202 KLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259
Query: 124 SM-ALTNLNLSGNGFSGAIPLRSSHASELLVL----------PSYPPMESLDLSGNALTG 172
+ + L P + +L +AL
Sbjct: 260 KNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLS 319
Query: 173 V-------LPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDK 225
L + N R R ++ + + A L+ ++ +
Sbjct: 320 GQGSETERLECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNG 379
Query: 226 LSLKLN 231
Sbjct: 380 RRAHAE 385
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 78.4 bits (193), Expect = 2e-15
Identities = 38/193 (19%), Positives = 70/193 (36%), Gaps = 17/193 (8%)
Query: 68 SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMAL 127
++ + +R + ++S+ L SL + + + LD+S N L + L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 128 TNLNLSGNGFSGAIPLRSSHASELL--------VLPSYPPMESLDLSGNALTGVLPSDIG 179
LNLS N + L S L L P +E+L + N ++ V
Sbjct: 61 ELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRV---SCS 117
Query: 180 NMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSL----KLNEFNV 235
+ + LANN ++ + ++YLDL N+ + L N+
Sbjct: 118 RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID-TVNFAELAASSDTLEHLNL 176
Query: 236 SYNDLSGPIPENL 248
YN + + +
Sbjct: 177 QYNFIYD-VKGQV 188
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 4e-24
Identities = 57/241 (23%), Positives = 90/241 (37%), Gaps = 29/241 (12%)
Query: 6 NSTTLSVLNLSSN---SLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSS 62
N L+VL L N SL + + L +S N + D +L+ L LSS
Sbjct: 115 NVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSS 174
Query: 63 NKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFF 122
N+L+ + S L N+ N ++ L I + LD S N + +
Sbjct: 175 NRLT-HVDL--SLIPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSINV-VRGPVN 225
Query: 123 SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMG 182
LT L L N + + L +YP + +DLS N L ++ M
Sbjct: 226 VE--LTILKLQHNNLT-----------DTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQ 272
Query: 183 RLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDL 240
RL L ++NN L + + L+ LDLS N + +L + +N +
Sbjct: 273 RLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI 330
Query: 241 S 241
Sbjct: 331 V 331
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 2e-21
Identities = 62/246 (25%), Positives = 100/246 (40%), Gaps = 26/246 (10%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKL 65
+T+L L LSSN L+ + + S ++S N++S ++ +E LD S N +
Sbjct: 163 ATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLS-TLAI----PIAVEELDASHNSI 217
Query: 66 SGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM 125
+ + L+ +++N++T LL P LV +D+S N+L+ I + F M
Sbjct: 218 N-VVRG--PVNVELTILKLQHNNLT-DTAWLLNY-PGLVEVDLSYNELEK-IMYHPFVKM 271
Query: 126 -ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRL 184
L L +S N A+ L L + LDLS N L + + RL
Sbjct: 272 QRLERLYISNNRLV-ALNLYGQPIPTL---------KVLDLSHNHLL-HVERNQPQFDRL 320
Query: 185 RLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPI 244
L L +N + + LS L+ L LS N + L + V D I
Sbjct: 321 ENLYLDHNSIV-TLK--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 377
Query: 245 PENLRN 250
L +
Sbjct: 378 DYQLEH 383
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 94.0 bits (234), Expect = 7e-21
Identities = 57/264 (21%), Positives = 106/264 (40%), Gaps = 24/264 (9%)
Query: 5 INSTTLSVLNLSSNSLS---GTLPTSLKSCVILDLSRNMISGDISDMQNWE-ANLEILDL 60
I ++ ++++ L S + +L+L+ I +I ++ L +
Sbjct: 42 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYM 100
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
N + P++ L+ + N ++ + +P+L TL +S+N L+ I D+
Sbjct: 101 GFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER-IEDD 159
Query: 121 FFSSM-ALTNLNLSGNGFS----GAIP-LRSSHAS--ELLVLPSYPPMESLDLSGNALTG 172
F + +L NL LS N + IP L ++ S L L +E LD S N++
Sbjct: 160 TFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINV 219
Query: 173 VLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKL---SLK 229
V L +L L +N+L+ + L L +DLS N+ + +I +
Sbjct: 220 VRGPVNVE---LTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELE-KIMYHPFVKMQR 273
Query: 230 LNEFNVSYNDLSGPIPENLRNFPK 253
L +S N L + + P
Sbjct: 274 LERLYISNNRLVA-LNLYGQPIPT 296
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 1e-20
Identities = 45/233 (19%), Positives = 93/233 (39%), Gaps = 20/233 (8%)
Query: 10 LSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSL 69
+ + + + G +L + I+ + + + + + +E+L+L+ ++
Sbjct: 26 VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEID 85
Query: 70 PNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM-ALT 128
+ + + N++ P + + P L L + N L +P F + LT
Sbjct: 86 TYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS-LPRGIFHNTPKLT 144
Query: 129 NLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLN 188
L++S N L S +++L LS N LT V D+ + L N
Sbjct: 145 TLSMSNN------NLERIEDDTFQATTS---LQNLQLSSNRLTHV---DLSLIPSLFHAN 192
Query: 189 LANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLS 241
++ N L S L+ A+E LD S N + ++++L + +N+L+
Sbjct: 193 VSYNLL-----STLAIPIAVEELDASHNSIN-VVRGPVNVELTILKLQHNNLT 239
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 3e-16
Identities = 39/194 (20%), Positives = 77/194 (39%), Gaps = 15/194 (7%)
Query: 58 LDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPI 117
+D+ + + ++T + +N+++ +LL+ ++ L+++ Q++ I
Sbjct: 28 IDMQTQDVYFGFEDIT--LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE-I 84
Query: 118 PDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPS 176
F+ + L + N +R +P + L L N L+ +
Sbjct: 85 DTYAFAYAHTIQKLYMGFNA------IRYLPPHVFQNVPL---LTVLVLERNDLSSLPRG 135
Query: 177 DIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVS 236
N +L L+++NN+L +L+ L LS N+ + L L NVS
Sbjct: 136 IFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDLSLIPSLFHANVS 194
Query: 237 YNDLSG-PIPENLR 249
YN LS IP +
Sbjct: 195 YNLLSTLAIPIAVE 208
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 9e-11
Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 16/144 (11%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPT--SLKSCVILDLSRNMIS----GDISDMQNWEAN 54
+ G + L++L L N+L+ + V +DLS N + MQ
Sbjct: 219 VVRGPVNVELTILKLQHNNLT-DTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQ----R 273
Query: 55 LEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLK 114
LE L +S+N+L +L L ++ +N + + RL L + N +
Sbjct: 274 LERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV 331
Query: 115 GPIPDNFFSSMALTNLNLSGNGFS 138
+ + + L NL LS N +
Sbjct: 332 -TLKLSTHHT--LKNLTLSHNDWD 352
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 6e-09
Identities = 28/199 (14%), Positives = 57/199 (28%), Gaps = 35/199 (17%)
Query: 87 NSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSS 146
+ L V +D+ + + D ++ + + +P
Sbjct: 11 KCIDSNLQYDCVF--YDVHIDMQTQDVYFGFEDITLNN--QKIVTFKNSTMR-KLPAA-- 63
Query: 147 HASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLG 206
+L S+ +E L+L+ + + ++ L + N + P +
Sbjct: 64 ------LLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVP 117
Query: 207 ALEYLDLSGNQFKGEIPDKL---SLKLNEFNVSYNDLSGPIPENLRNFPKSSFHP----- 258
L L L N +P + + KL ++S N NL +F
Sbjct: 118 LLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNN--------NLERIEDDTFQATTSLQ 168
Query: 259 -----GNALLIFPDGVPSS 272
N L + S
Sbjct: 169 NLQLSSNRLTHVDLSLIPS 187
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 9e-05
Identities = 12/113 (10%), Positives = 37/113 (32%), Gaps = 5/113 (4%)
Query: 139 GAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKM 198
P + + L + + + + +++ N+ +
Sbjct: 2 NVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLP 61
Query: 199 PSELSKLGALEYLDLSGNQFKGEIPDKL---SLKLNEFNVSYNDLSGPIPENL 248
+ L +E L+L+ Q + EI + + + + +N + +P ++
Sbjct: 62 AALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRY-LPPHV 112
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 1e-23
Identities = 53/247 (21%), Positives = 103/247 (41%), Gaps = 24/247 (9%)
Query: 7 STTLSVLNLSSNSLSGTLP----TSLKSCVILDLSRNMISGDISDMQNWE--ANLEILDL 60
++ + L L SN L +LP L L LS N +S Q+ +L+ LDL
Sbjct: 27 PSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLP--SLLEISPRLVTLDVSSNQLKGPIP 118
S N + ++ + ++L + +++++ + S+ L+ LD+S +
Sbjct: 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRV-AF 142
Query: 119 DNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSD 177
+ F+ + +L L ++GN F + L + + LDLS L + P+
Sbjct: 143 NGIFNGLSSLEVLKMAGNSF-----QENFLPDIFTELRN---LTFLDLSQCQLEQLSPTA 194
Query: 178 IGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFK---GEIPDKLSLKLNEFN 234
++ L++LN+++N+ L +L+ LD S N + L N
Sbjct: 195 FNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLN 254
Query: 235 VSYNDLS 241
++ ND +
Sbjct: 255 LTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 7e-18
Identities = 47/264 (17%), Positives = 92/264 (34%), Gaps = 48/264 (18%)
Query: 6 NSTTLSVLNLSSNSLSGTLP---TSLKSCVILDLSRNMISGDISDMQNWE--ANLEILDL 60
+T+L L+LS N + T+ L+ LD + + +S+ + NL LD+
Sbjct: 76 GTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDI 133
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
S N F+ L L L ++ N + +
Sbjct: 134 SHTHTR-VAFNGI--FNGL---------------------SSLEVLKMAGNSFQENFLPD 169
Query: 121 FFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIG 179
F+ + LT L+LS + + ++ L + L++S N +
Sbjct: 170 IFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSL--------QVLNMSHNNFFSLDTFPYK 220
Query: 180 NMGRLRLLNLANNHLSGKMPSELSKL-GALEYLDLSGNQFK--GEIPDKLSLKLNEFNVS 236
+ L++L+ + NH+ EL +L +L+L+ N F E + +
Sbjct: 221 CLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQS-FLQWIKDQRQL 279
Query: 237 YNDLSGPI---PENLRNFPKSSFH 257
++ P + + P S +
Sbjct: 280 LVEVERMECATPSDKQGMPVLSLN 303
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 2e-12
Identities = 36/171 (21%), Positives = 66/171 (38%), Gaps = 23/171 (13%)
Query: 99 ISPRLVTLDVSSNQLKGPIPDNFFSSM-ALTNLNLSGNG----------FSGAIPLRSSH 147
I L++ SN+L+ +P F + LT L+LS NG G L+
Sbjct: 26 IPSSATRLELESNKLQS-LPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84
Query: 148 AS--ELLVLPS----YPPMESLDLSGNALTGVLPSDI-GNMGRLRLLNLANNHLSGKMPS 200
S ++ + S +E LD + L + + ++ L L++++ H
Sbjct: 85 LSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNG 144
Query: 201 ELSKLGALEYLDLSGNQFKGEIPDKL--SL-KLNEFNVSYNDLSGPIPENL 248
+ L +LE L ++GN F+ + L L ++S L +
Sbjct: 145 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ-LSPTA 194
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 2e-23
Identities = 45/226 (19%), Positives = 87/226 (38%), Gaps = 30/226 (13%)
Query: 6 NSTTLSVLNLSSNSLSGTLP----TSLKSCVILDLSRNMIS----GDISDMQNWEANLEI 57
+ L+ L++S N + L L + L++ N + S + + LE
Sbjct: 102 GLSNLTKLDISENKIV-ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS----LEQ 156
Query: 58 LDLSSNKLS----GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQL 113
L L L+ +L +L L +R+ ++ + RL L++S
Sbjct: 157 LTLEKCNLTSIPTEALSHLHG----LIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY 212
Query: 114 KGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGV 173
+ N + LT+L+++ + A+P + + L+LS N ++ +
Sbjct: 213 LDTMTPNCLYGLNLTSLSITHCNLT-AVPYL--------AVRHLVYLRFLNLSYNPISTI 263
Query: 174 LPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFK 219
S + + RL+ + L L+ P L L L++SGNQ
Sbjct: 264 EGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT 309
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 2e-21
Identities = 51/250 (20%), Positives = 91/250 (36%), Gaps = 45/250 (18%)
Query: 7 STTLSVLNLSSNSLSGTLP----TSLKSCVILDLSRNMISGDISDMQ-NWEANLEILDLS 61
T +L+L N + TL S L+L+ N++S + N NL L L
Sbjct: 31 PTETRLLDLGKNRIK-TLNQDEFASFPHLEELELNENIVS-AVEPGAFNNLFNLRTLGLR 88
Query: 62 SNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNF 121
SN+L +P F L L LD+S N++ + D
Sbjct: 89 SNRLK-LIPLGV--FTGL---------------------SNLTKLDISENKIVI-LLDYM 123
Query: 122 FSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN 180
F + L +L + N L L S +E L L LT + + +
Sbjct: 124 FQDLYNLKSLEVGDN------DLVYISHRAFSGLNS---LEQLTLEKCNLTSIPTEALSH 174
Query: 181 MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKL--SLKLNEFNVSYN 238
+ L +L L + +++ +L L+ L++S + + L L ++++
Sbjct: 175 LHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHC 234
Query: 239 DLSGPIPENL 248
+L+ +P
Sbjct: 235 NLTA-VPYLA 243
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 2e-11
Identities = 27/147 (18%), Positives = 54/147 (36%), Gaps = 15/147 (10%)
Query: 99 ISPRLVTLDVSSNQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSY 157
I LD+ N++K + + F+S L L L+ N + + L +
Sbjct: 30 IPTETRLLDLGKNRIKT-LNQDEFASFPHLEELELNENI------VSAVEPGAFNNLFN- 81
Query: 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQ 217
+ +L L N L + + L L+++ N + + L L+ L++ N
Sbjct: 82 --LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDND 139
Query: 218 FKGEIPDKL--SL-KLNEFNVSYNDLS 241
I + L L + + +L+
Sbjct: 140 LV-YISHRAFSGLNSLEQLTLEKCNLT 165
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 7e-09
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Query: 151 LLVLPSYPP--MESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGAL 208
+ +P P LDL N + + + + L L L N +S P + L L
Sbjct: 23 FVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNL 82
Query: 209 EYLDLSGNQFKGEIPDKL---SLKLNEFNVSYNDLS 241
L L N+ K IP + L + ++S N +
Sbjct: 83 RTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIV 117
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 9e-07
Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 39/139 (28%)
Query: 6 NSTTLSVLNLSSNSLSGTLPT----SLKSCVILDLSRNMIS----GDISDMQNWEANLEI 57
L+ L+++ +L+ +P L L+LS N IS + ++ L+
Sbjct: 222 YGLNLTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELL----RLQE 276
Query: 58 LDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPI 117
+ L +L+ + F L L L+VS NQL +
Sbjct: 277 IQLVGGQLA-VVEPYA--FRGL---------------------NYLRVLNVSGNQLTT-L 311
Query: 118 PDNFFSSM-ALTNLNLSGN 135
++ F S+ L L L N
Sbjct: 312 EESVFHSVGNLETLILDSN 330
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 3e-23
Identities = 50/269 (18%), Positives = 85/269 (31%), Gaps = 34/269 (12%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMIS---GDISDMQNWEAN 54
+ L L S L P L + + + +
Sbjct: 74 LLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLMELPDTMQQFAG---- 128
Query: 55 LEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPS---------LLEISPRLVT 105
LE L L+ N L +LP + +RL +IR LP + L +
Sbjct: 129 LETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQS 187
Query: 106 LDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDL 165
L + ++ +P + + L +L + + S A+ + LP +E LDL
Sbjct: 188 LRLEWTGIRS-LPASIANLQNLKSLKIRNSPLS-ALG------PAIHHLPK---LEELDL 236
Query: 166 SGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDK 225
G P G L+ L L + +P ++ +L LE LDL G +P
Sbjct: 237 RGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSL 296
Query: 226 LSL--KLNEFNVSYNDLSGPIPENLRNFP 252
++ V + + P
Sbjct: 297 IAQLPANCIILVPPHLQAQLDQHRPVARP 325
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 3e-22
Identities = 46/268 (17%), Positives = 93/268 (34%), Gaps = 39/268 (14%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSC-----VILDLSRNMIS---GDISDMQNWEANLEI 57
NS + + +L L+ V L+L + + + L+
Sbjct: 54 NSNNPQIETRTGRALK-ATADLLEDATQPGRVALELRSVPLPQFPDQAFRLSH----LQH 108
Query: 58 LDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPI 117
+ + + L LP+ QF L T + N + LP+ + RL L + + +
Sbjct: 109 MTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTEL 166
Query: 118 PDNFFSSMA---------LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGN 168
P+ S+ A L +L L G ++P + + L + ++SL + +
Sbjct: 167 PEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLP------ASIANLQN---LKSLKIRNS 216
Query: 169 ALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSG-NQFKGEIPDKLS 227
L+ L I ++ +L L+L P L+ L L + +P +
Sbjct: 217 PLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL-TLPLDIH 274
Query: 228 L--KLNEFNVSYNDLSGPIPENLRNFPK 253
+L + ++ +P + P
Sbjct: 275 RLTQLEKLDLRGCVNLSRLPSLIAQLPA 302
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 7e-18
Identities = 36/260 (13%), Positives = 74/260 (28%), Gaps = 27/260 (10%)
Query: 3 HGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSS 62
H +S+ L ++ L + N N +I +
Sbjct: 7 HHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSN-NPQIETRTG 65
Query: 63 NKLSGSLPNLT-SQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNF 121
L + L + +R+ + P L + + + L +PD
Sbjct: 66 RALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLME-LPDTM 123
Query: 122 FSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN- 180
L L L+ N A+P + + L + L + LP + +
Sbjct: 124 QQFAGLETLTLARNPLR-ALP------ASIASLNR---LRELSIRACPELTELPEPLAST 173
Query: 181 --------MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKL 230
+ L+ L L + +P+ ++ L L+ L + + + + KL
Sbjct: 174 DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKL 231
Query: 231 NEFNVSYNDLSGPIPENLRN 250
E ++ P
Sbjct: 232 EELDLRGCTALRNYPPIFGG 251
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 4e-16
Identities = 46/213 (21%), Positives = 69/213 (32%), Gaps = 24/213 (11%)
Query: 8 TTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRN---------MISGDISDMQNWEANL 55
L L L+ N L LP S L L + + S D S NL
Sbjct: 127 AGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNL 185
Query: 56 EILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKG 115
+ L L + SLP + L + IRN+ ++ L + P+L LD+
Sbjct: 186 QSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALR 243
Query: 116 PIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLP 175
P F L L L +P ++ L +E LDL G LP
Sbjct: 244 NYPPIFGGRAPLKRLILKDCSNLLTLP------LDIHRLTQ---LEKLDLRGCVNLSRLP 294
Query: 176 SDIGNMGRLRLLNLANNHLSGKMPSELSKLGAL 208
S I + ++ + + + A
Sbjct: 295 SLIAQLPANCIILVPPHLQAQLDQHRPVARPAE 327
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 3e-23
Identities = 59/269 (21%), Positives = 105/269 (39%), Gaps = 32/269 (11%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSS 62
L VLNL+ N ++ + L + +L+LS N++ S + +DL
Sbjct: 288 TLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQK 347
Query: 63 NKLSGSLPNLTSQFDRLSTFNIRNNSVTG---------------TLPSLLEISPRLVTLD 107
N ++ ++L T ++R+N++T L +L +I+ +
Sbjct: 348 NHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIH 407
Query: 108 VSSNQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLS 166
+S N+L+ F + L L L+ N FS P +E L L
Sbjct: 408 LSENRLENLDILYFLLRVPHLQILILNQNRFSS---CSGDQTPSEN-----PSLEQLFLG 459
Query: 167 GNALTGVLPSDI-----GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGE 221
N L +++ + L++L L +N+L+ P S L AL L L+ N+
Sbjct: 460 ENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVL 519
Query: 222 IPDKLSLKLNEFNVSYNDLSGPIPENLRN 250
+ L L ++S N L P P+ +
Sbjct: 520 SHNDLPANLEILDISRNQLLAPNPDVFVS 548
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 94.9 bits (236), Expect = 2e-20
Identities = 50/270 (18%), Positives = 94/270 (34%), Gaps = 22/270 (8%)
Query: 5 INSTTLSVLNLSSNSLSGTLPTSLKSCV-----ILDLSRNMISGDISDMQNWEANLEILD 59
I + + +++ + LDLS + S + +L++L+
Sbjct: 237 ILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLN 296
Query: 60 LSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPD 119
L+ NK++ D L N+ N + S P++ +D+ N + I D
Sbjct: 297 LAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAI-IQD 355
Query: 120 NFFSSMA-LTNLNLSGNGFSGAIPLRSSH-----ASELLVLPSYPP-MESLDLSGNALTG 172
F + L L+L N + + S ++L+ LP + LS N L
Sbjct: 356 QTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLEN 415
Query: 173 VLPSDI-GNMGRLRLLNLANNHLSGKMPSEL-SKLGALEYLDLSGNQFKGEIPDKLSL-- 228
+ + L++L L N S + S+ +LE L L N + +L
Sbjct: 416 LDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDV 475
Query: 229 -----KLNEFNVSYNDLSGPIPENLRNFPK 253
L +++N L+ P +
Sbjct: 476 FEGLSHLQVLYLNHNYLNSLPPGVFSHLTA 505
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 93.7 bits (233), Expect = 4e-20
Identities = 51/259 (19%), Positives = 85/259 (32%), Gaps = 50/259 (19%)
Query: 7 STTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMIS----GDISDMQNWEANLEILDLSS 62
S + +L+ +P L + L LS N I ++ L++L+L S
Sbjct: 3 SFDGRIAFYRFCNLT-QVPQVLNTTERLLLSFNYIRTVTASSFPFLEQ----LQLLELGS 57
Query: 63 NKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFF 122
++ F L P L LD+ S+++ PD F
Sbjct: 58 QYTPLTIDKEA--FRNL---------------------PNLRILDLGSSKIYFLHPDAFQ 94
Query: 123 SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGV-LPSDIGNM 181
L L L G S A+ + + LDLS N + + L G +
Sbjct: 95 GLFHLFELRLYFCGLSDAVLKDGY-------FRNLKALTRLDLSKNQIRSLYLHPSFGKL 147
Query: 182 GRLRLLNLANNHLSGKMPSELSKLGA--LEYLDLSGNQFKGEIPDKLS--------LKLN 231
L+ ++ ++N + EL L L + L+ N + + L
Sbjct: 148 NSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLE 207
Query: 232 EFNVSYNDLSGPIPENLRN 250
+VS N + I N N
Sbjct: 208 ILDVSGNGWTVDITGNFSN 226
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 90.2 bits (224), Expect = 5e-19
Identities = 48/275 (17%), Positives = 86/275 (31%), Gaps = 36/275 (13%)
Query: 8 TTLSVLNLSSNSLSGTLPTSLKSCV---ILDLSRNMISGDI-SDMQNWEANLEILDLSSN 63
T L LS N + +S +L+L I + NL ILDL S+
Sbjct: 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83
Query: 64 KLSGSLPNLTSQFDRLSTFNIRNNSVTGTL--PSLLEISPRLVTLDVSSNQLKGPIPDNF 121
K+ P+ L + ++ + L LD+S NQ++
Sbjct: 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPS 143
Query: 122 FSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN 180
F + +L +++ S N + EL L + L+ N+L + D G
Sbjct: 144 FGKLNSLKSIDFSSN------QIFLVCEHELEPL-QGKTLSFFSLAANSLYSRVSVDWGK 196
Query: 181 MG------RLRLLNLANNHLSGKMPS------------ELSKLGALEYLDLSGNQFKGEI 222
L +L+++ N + + L + + K +
Sbjct: 197 CMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIK-DP 255
Query: 223 PDKLSLKLNEFNVSYNDLSGPIPENLRNFPKSSFH 257
L +V + DLS + + F
Sbjct: 256 DQNTFAGLARSSVRHLDLSH---GFVFSLNSRVFE 287
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 86.8 bits (215), Expect = 5e-18
Identities = 48/246 (19%), Positives = 93/246 (37%), Gaps = 42/246 (17%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDL 60
+ + TLS +L++NSL + C ++ RNM LEILD+
Sbjct: 167 ELEPLQGKTLSFFSLAANSLYSRVSVDWGKC--MNPFRNM-------------VLEILDV 211
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
S N + + +N+++ + L ++ ++ + +K N
Sbjct: 212 SGNGWTVDITGN------------FSNAISKSQAFSLILAHHIMGAGFGFHNIKD-PDQN 258
Query: 121 FFSSMA---LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSD 177
F+ +A + +L+LS ++ R V + ++ L+L+ N + +
Sbjct: 259 TFAGLARSSVRHLDLSHGFVF-SLNSR--------VFETLKDLKVLNLAYNKINKIADEA 309
Query: 178 IGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSL--KLNEFNV 235
+ L++LNL+ N L S L + Y+DL N KL ++
Sbjct: 310 FYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDL 369
Query: 236 SYNDLS 241
N L+
Sbjct: 370 RDNALT 375
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 85.2 bits (211), Expect = 2e-17
Identities = 59/284 (20%), Positives = 97/284 (34%), Gaps = 46/284 (16%)
Query: 6 NSTTLSVLNLSSNSLS---GTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSS 62
++ ++L N ++ L+ LDL N ++ + ++ + LS
Sbjct: 336 GLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDN----ALTTIHFIP-SIPDIFLSG 390
Query: 63 NKLSGSLP--NLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
NKL +LP NLT+ LS + N + L + P L L ++ N+ D
Sbjct: 391 NKLV-TLPKINLTANLIHLSENRLENLDILYFLLRV----PHLQILILNQNRFSSCSGDQ 445
Query: 121 FFSSM-ALTNLNLSGNGFSG----AIPLRS-SHASELLVL---------------PSYPP 159
S +L L L N + S L VL
Sbjct: 446 TPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTA 505
Query: 160 MESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFK 219
+ L L+ N LT + +D+ L +L+++ N L P L LD++ N+F
Sbjct: 506 LRGLSLNSNRLTVLSHNDL--PANLEILDISRNQLLAPNPDVFVS---LSVLDITHNKFI 560
Query: 220 GEIPDK-LSLKLNEFNVSYNDLSGPI----PENLRNFPKSSFHP 258
E LN NV+ I P++ S
Sbjct: 561 CECELSTFINWLNHTNVTIAGPPADIYCVYPDSFSGVSLFSLST 604
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 59.8 bits (145), Expect = 1e-09
Identities = 23/155 (14%), Positives = 44/155 (28%), Gaps = 19/155 (12%)
Query: 105 TLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164
L +P + L LS N + S P ++ L+
Sbjct: 8 IAFYRFCNLTQ-VPQVLNT---TERLLLSFNYIR-TVTASS--------FPFLEQLQLLE 54
Query: 165 LSGNALTGVLPSDI-GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIP 223
L + + N+ LR+L+L ++ + P L L L L +
Sbjct: 55 LGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVL 114
Query: 224 DKLSLK----LNEFNVSYNDLSG-PIPENLRNFPK 253
+ L ++S N + + +
Sbjct: 115 KDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNS 149
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 1e-22
Identities = 59/251 (23%), Positives = 92/251 (36%), Gaps = 36/251 (14%)
Query: 2 IHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLS 61
+ L L++ LS +LP L S N ++ ++ ++ +L + + +
Sbjct: 65 LRDCLDRQAHELELNNLGLS-SLPELPPHLESLVASCNSLT-ELPELPQSLKSLLVDNNN 122
Query: 62 SNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNF 121
LS P L + NN + LP L S L +DV +N LK +PD
Sbjct: 123 LKALSDLPPLLEY-------LGVSNNQLE-KLPELQN-SSFLKIIDVDNNSLKK-LPDLP 172
Query: 122 FSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNM 181
S L + N +P EL LP + ++ N+L LP +
Sbjct: 173 PS---LEFIAAGNNQLE-ELP-------ELQNLPF---LTAIYADNNSLK-KLPDLPLS- 216
Query: 182 GRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLS 241
L + NN L EL L L + N K +PD L NV N L+
Sbjct: 217 --LESIVAGNNILE--ELPELQNLPFLTTIYADNNLLK-TLPDLPP-SLEALNVRDNYLT 270
Query: 242 G--PIPENLRN 250
+P++L
Sbjct: 271 DLPELPQSLTF 281
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 2e-21
Identities = 60/278 (21%), Positives = 104/278 (37%), Gaps = 59/278 (21%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKL 65
N L+ + +NSL LP S + N++ ++ ++QN L + +N L
Sbjct: 193 NLPFLTAIYADNNSLK-KLPDLPLSLESIVAGNNILE-ELPELQNLP-FLTTIYADNNLL 249
Query: 66 SGSLPNLTSQFDRLSTFNIRNNSVTGTLPSL--LEIS-----------PRLVTLDVSSNQ 112
+LP+L + L+ + + SL L++S P L L+ SSN+
Sbjct: 250 K-TLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNE 308
Query: 113 LKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPP-MESLDLSGNALT 171
++ + D S L LN+S N +L+ LP+ PP +E L S N L
Sbjct: 309 IRS-LCDLPPS---LEELNVSNN--------------KLIELPALPPRLERLIASFNHLA 350
Query: 172 GVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKL----------------GALEYLDLSG 215
+P N L+ L++ N L + P + L+ L +
Sbjct: 351 -EVPELPQN---LKQLHVEYNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVET 405
Query: 216 NQFKGEIPDKLSLKLNEFNVSYNDLSGPIPENLRNFPK 253
N + E PD + + ++ + P K
Sbjct: 406 NPLR-EFPDIPE-SVEDLRMNSERVVDPYEFAHETTDK 441
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 2e-19
Identities = 52/248 (20%), Positives = 88/248 (35%), Gaps = 34/248 (13%)
Query: 5 INSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLS 61
+++T L S++L+ +P +KS + + + N E +++
Sbjct: 8 VSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAP-----PGNGEQREMA 61
Query: 62 SNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNF 121
++L L + + N ++ +LP L P L +L S N L +P+
Sbjct: 62 VSRLRDCLDR------QAHELELNNLGLS-SLPELP---PHLESLVASCNSLT-ELPELP 110
Query: 122 FSSMALTNLNLSGNGFSGAIP-LRSSHAS--ELLVLPSYPPM---ESLDLSGNALTGVLP 175
S +L N + S P L S +L LP + +D+ N+L LP
Sbjct: 111 QSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK-KLP 169
Query: 176 SDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNV 235
+ L + NN L EL L L + N K ++PD L
Sbjct: 170 DLPPS---LEFIAAGNNQLEE--LPELQNLPFLTAIYADNNSLK-KLPDLPL-SLESIVA 222
Query: 236 SYNDLSGP 243
N L
Sbjct: 223 GNNILEEL 230
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 5e-17
Identities = 45/230 (19%), Positives = 77/230 (33%), Gaps = 35/230 (15%)
Query: 8 TTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSG 67
L+ + +N L TLP S L++ N ++ Q+ L++ + + LS
Sbjct: 237 PFLTTIYADNNLLK-TLPDLPPSLEALNVRDNYLTDLPELPQSLT-FLDVSENIFSGLSE 294
Query: 68 SLPNLTS-------------QFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLK 114
PNL L N+ NN + LP+L PRL L S N L
Sbjct: 295 LPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALP---PRLERLIASFNHLA 350
Query: 115 GPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLV------LPSYPP-MESLDLSG 167
+P+ + L L++ N P +L + +P P ++ L +
Sbjct: 351 E-VPELPQN---LKQLHVEYNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVET 405
Query: 168 NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQ 217
N L P + + L + + + LE +
Sbjct: 406 NPLR-EFPDIPES---VEDLRMNSERVVDPYEFAHETTDKLEDDVFEHHH 451
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 1e-13
Identities = 44/196 (22%), Positives = 71/196 (36%), Gaps = 27/196 (13%)
Query: 8 TTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSG 67
+L+ L++S N S L + L+ S N I + LE L++S+NKL
Sbjct: 277 QSLTFLDVSENIFS-GLSELPPNLYYLNASSNEIRSLCDLPPS----LEELNVSNNKLI- 330
Query: 68 SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMAL 127
LP L RL N + +P L L L V N L+ PD S +
Sbjct: 331 ELPAL---PPRLERLIASFNHLA-EVPELP---QNLKQLHVEYNPLRE-FPDIPES---V 379
Query: 128 TNLNLSGNGFSGAIP-----LRSSHASE--LLVLPSYPP-MESLDLSGNALTGVLPSDIG 179
+L ++ + +P L+ H L P P +E L ++ +
Sbjct: 380 EDLRMNSH--LAEVPELPQNLKQLHVETNPLREFPDIPESVEDLRMNSERVVDPYEFAHE 437
Query: 180 NMGRLRLLNLANNHLS 195
+L ++H
Sbjct: 438 TTDKLEDDVFEHHHHH 453
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 8e-13
Identities = 42/190 (22%), Positives = 65/190 (34%), Gaps = 24/190 (12%)
Query: 79 LSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFS 138
L ++++T +P E + ++ + P + L
Sbjct: 13 LQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDR 71
Query: 139 GAIPLRSSHASELLVLPSYPP-MESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGK 197
A L ++ L LP PP +ESL S N+LT LP ++ L + N LS
Sbjct: 72 QAHELELNNLG-LSSLPELPPHLESLVASCNSLT-ELPELPQSLKSLLVDNNNLKALSDL 129
Query: 198 MPS---------------ELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSG 242
P EL L+ +D+ N K ++PD L N L
Sbjct: 130 PPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK-KLPDLPP-SLEFIAAGNNQLEE 187
Query: 243 PIPE--NLRN 250
+PE NL
Sbjct: 188 -LPELQNLPF 196
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 1e-22
Identities = 57/241 (23%), Positives = 90/241 (37%), Gaps = 29/241 (12%)
Query: 6 NSTTLSVLNLSSN---SLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSS 62
N L+VL L N SL + + L +S N + D +L+ L LSS
Sbjct: 121 NVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSS 180
Query: 63 NKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFF 122
N+L+ + S L N+ N ++ L I + LD S N + +
Sbjct: 181 NRLT-HVD--LSLIPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSINV-VRGPVN 231
Query: 123 SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMG 182
LT L L N + + L +YP + +DLS N L ++ M
Sbjct: 232 VE--LTILKLQHNNLT-----------DTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQ 278
Query: 183 RLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDL 240
RL L ++NN L + + L+ LDLS N + +L + +N +
Sbjct: 279 RLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI 336
Query: 241 S 241
Sbjct: 337 V 337
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 94.6 bits (235), Expect = 1e-20
Identities = 62/254 (24%), Positives = 100/254 (39%), Gaps = 26/254 (10%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKL 65
+T+L L LSSN L+ + + S ++S N++S ++ +E LD S N +
Sbjct: 169 ATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLS-TLAIP----IAVEELDASHNSI 223
Query: 66 SGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM 125
+ + L+ +++N++T LL P LV +D+S N+L+ I + F M
Sbjct: 224 N-VVRG--PVNVELTILKLQHNNLT-DTAWLLNY-PGLVEVDLSYNELEK-IMYHPFVKM 277
Query: 126 -ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRL 184
L L +S N A+ L L + LDLS N L + + RL
Sbjct: 278 QRLERLYISNNRLV-ALNLYGQPIPTL---------KVLDLSHNHLL-HVERNQPQFDRL 326
Query: 185 RLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPI 244
L L +N + + LS L+ L LS N + L + V D I
Sbjct: 327 ENLYLDHNSIV-TLK--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 383
Query: 245 PENLRNFPKSSFHP 258
L +
Sbjct: 384 DYQLEHGLCCKESD 397
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 91.1 bits (226), Expect = 2e-19
Identities = 45/233 (19%), Positives = 93/233 (39%), Gaps = 20/233 (8%)
Query: 10 LSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSL 69
+ + + + G +L + I+ + + + + + +E+L+L+ ++
Sbjct: 32 VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEID 91
Query: 70 PNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM-ALT 128
+ + + N++ P + + P L L + N L +P F + LT
Sbjct: 92 TYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS-LPRGIFHNTPKLT 150
Query: 129 NLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLN 188
L++S N L S +++L LS N LT V D+ + L N
Sbjct: 151 TLSMSNN------NLERIEDDTFQATTS---LQNLQLSSNRLTHV---DLSLIPSLFHAN 198
Query: 189 LANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLS 241
++ N L S L+ A+E LD S N + ++++L + +N+L+
Sbjct: 199 VSYNLL-----STLAIPIAVEELDASHNSIN-VVRGPVNVELTILKLQHNNLT 245
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 90.8 bits (225), Expect = 2e-19
Identities = 56/263 (21%), Positives = 106/263 (40%), Gaps = 22/263 (8%)
Query: 5 INSTTLSVLNLSSNSLS---GTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLS 61
I ++ ++++ L S + +L+L+ I + + ++ L +
Sbjct: 48 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMG 107
Query: 62 SNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNF 121
N + P++ L+ + N ++ + +P+L TL +S+N L+ I D+
Sbjct: 108 FNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER-IEDDT 166
Query: 122 FSSM-ALTNLNLSGNGFS----GAIP-LRSSHAS--ELLVLPSYPPMESLDLSGNALTGV 173
F + +L NL LS N + IP L ++ S L L +E LD S N++ V
Sbjct: 167 FQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVV 226
Query: 174 LPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKL---SLKL 230
L +L L +N+L+ + L L +DLS N+ + +I +L
Sbjct: 227 RGPVNVE---LTILKLQHNNLT--DTAWLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRL 280
Query: 231 NEFNVSYNDLSGPIPENLRNFPK 253
+S N L + + P
Sbjct: 281 ERLYISNNRLVA-LNLYGQPIPT 302
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 79.2 bits (195), Expect = 1e-15
Identities = 39/194 (20%), Positives = 77/194 (39%), Gaps = 15/194 (7%)
Query: 58 LDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPI 117
+D+ + + ++T + +N+++ +LL+ ++ L+++ Q++ I
Sbjct: 34 IDMQTQDVYFGFEDIT--LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE-I 90
Query: 118 PDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPS 176
F+ + L + N +R +P + L L N L+ +
Sbjct: 91 DTYAFAYAHTIQKLYMGFNA------IRYLPPHVFQNVPL---LTVLVLERNDLSSLPRG 141
Query: 177 DIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVS 236
N +L L+++NN+L +L+ L LS N+ + L L NVS
Sbjct: 142 IFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDLSLIPSLFHANVS 200
Query: 237 YNDLSG-PIPENLR 249
YN LS IP +
Sbjct: 201 YNLLSTLAIPIAVE 214
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 61.1 bits (148), Expect = 5e-10
Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 16/144 (11%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPT--SLKSCVILDLSRNMIS----GDISDMQNWEAN 54
+ G + L++L L N+L+ + V +DLS N + MQ
Sbjct: 225 VVRGPVNVELTILKLQHNNLT-DTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQ----R 279
Query: 55 LEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLK 114
LE L +S+N+L +L L ++ +N + + RL L + N +
Sbjct: 280 LERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV 337
Query: 115 GPIPDNFFSSMALTNLNLSGNGFS 138
+ + + L NL LS N +
Sbjct: 338 -TLKLSTHHT--LKNLTLSHNDWD 358
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 1e-04
Identities = 13/120 (10%), Positives = 39/120 (32%), Gaps = 5/120 (4%)
Query: 132 LSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLAN 191
+ G P + + L + + + + +++ N
Sbjct: 1 VGGQQRYNVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKN 60
Query: 192 NHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKL---SLKLNEFNVSYNDLSGPIPENL 248
+ + + L +E L+L+ Q + EI + + + + +N + +P ++
Sbjct: 61 STMRKLPAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRY-LPPHV 118
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 4e-22
Identities = 54/271 (19%), Positives = 89/271 (32%), Gaps = 40/271 (14%)
Query: 7 STTLSVLNLSSNSLSGTLP----TSLKSCVILDLSRNMIS----GDISDMQNWEANLEIL 58
S ++L+L +N +S L L+ L L N IS S ++ L+ L
Sbjct: 53 SPDTTLLDLQNNDIS-ELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRK----LQKL 107
Query: 59 DLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLK-GPI 117
+S N L +P L I +N + + + +++ N L+
Sbjct: 108 YISKNHLV-EIPPNL--PSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGF 164
Query: 118 PDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSD 177
F + L L +S + IP LP + L L N + + D
Sbjct: 165 EPGAFDGLKLNYLRISEAKLT-GIPKD---------LPET--LNELHLDHNKIQAIELED 212
Query: 178 IGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNV 235
+ +L L L +N + LS L L L L N+ +P L L +
Sbjct: 213 LLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYL 271
Query: 236 SYNDLSGPIPENLRNFPKSSFHPGNALLIFP 266
N N+ + F P +
Sbjct: 272 HTN--------NITKVGVNDFCPVGFGVKRA 294
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 3e-18
Identities = 44/224 (19%), Positives = 76/224 (33%), Gaps = 30/224 (13%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMIS----GDISDMQNWEANLEILDLS 61
L L +S N L P S V L + N I G S ++ N+ +++
Sbjct: 100 PLRKLQKLYISKNHLVEIPPNLPSSLVELRIHDNRIRKVPKGVFSGLR----NMNCIEMG 155
Query: 62 SNKL-SGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
N L + +L+ I +TG L L L + N+++ I
Sbjct: 156 GNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLP---ETLNELHLDHNKIQA-IELE 211
Query: 121 FFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIG 179
L L L N +R L LP+ + L L N L+ +P+ +
Sbjct: 212 DLLRYSKLYRLGLGHN------QIRMIENGSLSFLPT---LRELHLDNNKLS-RVPAGLP 261
Query: 180 NMGRLRLLNLANNHLSG------KMPSELSKLGALEYLDLSGNQ 217
++ L+++ L N+++ K + L N
Sbjct: 262 DLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNP 305
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 9e-13
Identities = 29/193 (15%), Positives = 59/193 (30%), Gaps = 21/193 (10%)
Query: 10 LSVLNLSSNSLSGTL--PTSLKSC--VILDLSRNMISGDISDMQNWEANLEILDLSSNKL 65
++ + + N L + P + L +S ++ I ++ L L L NK+
Sbjct: 149 MNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT-GIP--KDLPETLNELHLDHNKI 205
Query: 66 S----GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNF 121
L + L + +N + L P L L + +N+L +P
Sbjct: 206 QAIELEDLLRYSK----LYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSR-VPAGL 260
Query: 122 FSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT--GVLPSDIG 179
L + L N + + + + + L N + V P+
Sbjct: 261 PDLKLLQVVYLHTNNITK---VGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFR 317
Query: 180 NMGRLRLLNLANN 192
+ + N
Sbjct: 318 CVTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 1e-09
Identities = 38/158 (24%), Positives = 61/158 (38%), Gaps = 24/158 (15%)
Query: 98 EISPRLVTLDVSSNQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPS 156
EISP LD+ +N + + + F + L L L N + H L
Sbjct: 51 EISPDTTLLDLQNNDISE-LRKDDFKGLQHLYALVLVNNK------ISKIHEKAFSPLRK 103
Query: 157 YPPMESLDLSGNALTGV---LPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDL 213
++ L +S N L + LPS L L + +N + S L + +++
Sbjct: 104 ---LQKLYISKNHLVEIPPNLPSS------LVELRIHDNRIRKVPKGVFSGLRNMNCIEM 154
Query: 214 SGNQFK-GEIPDKL--SLKLNEFNVSYNDLSGPIPENL 248
GN + LKLN +S L+G IP++L
Sbjct: 155 GGNPLENSGFEPGAFDGLKLNYLRISEAKLTG-IPKDL 191
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 2e-21
Identities = 44/231 (19%), Positives = 81/231 (35%), Gaps = 21/231 (9%)
Query: 5 INSTTLSVLNLSSNSLSGTLPTSLKSCV---ILDLSRNMISGDISDMQNWEANLEILDLS 61
+ + T+ L++ L L T + + + + +LE LDLS
Sbjct: 283 VETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLS 342
Query: 62 SNKLSGSLPNLTSQFD---RLSTFNIRNNSVT--GTLPSLLEISPRLVTLDVSSNQLKGP 116
N + ++ L T + N + +L L +LD+S N P
Sbjct: 343 ENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-P 401
Query: 117 IPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVL---------PSYPPMESLDLSG 167
+PD+ + LNLS G + E+L + P ++ L +S
Sbjct: 402 MPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISR 460
Query: 168 NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQF 218
N L + D L ++ ++ N L +L +L+ + L N +
Sbjct: 461 NKLKTL--PDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 92.5 bits (230), Expect = 5e-20
Identities = 40/247 (16%), Positives = 84/247 (34%), Gaps = 23/247 (9%)
Query: 10 LSVLNLSSNSLS---GTLPTSLKSCVILDLSRNMIS----GDISDMQNWEANLEILDLSS 62
V + S S + L ++K LDLS N I+ GD+ N L++L L S
Sbjct: 7 SGVCDGRSRSFTSIPSGLTAAMK---SLDLSFNKITYIGHGDLRACAN----LQVLILKS 59
Query: 63 NKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFF 122
++++ + L ++ +N ++ S L L++ N + + F
Sbjct: 60 SRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLF 119
Query: 123 SSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNM 181
++ L L + I + L S + L++ +L + ++
Sbjct: 120 PNLTNLQTLRIGNVETFSEIR-----RIDFAGLTS---LNELEIKALSLRNYQSQSLKSI 171
Query: 182 GRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLS 241
+ L L + + + L ++ YL+L L + +
Sbjct: 172 RDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFR 231
Query: 242 GPIPENL 248
G + +
Sbjct: 232 GSVLTDE 238
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 3e-17
Identities = 37/258 (14%), Positives = 79/258 (30%), Gaps = 26/258 (10%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTS----LKSCVILDLSRNMIS----GDISDMQNWEANLEI 57
N T L L + + + L S L++ + + +++ +
Sbjct: 121 NLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRD----IHH 176
Query: 58 LDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPI 117
L L ++ + L + +R+ ++ S L + + + +
Sbjct: 177 LTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLT 236
Query: 118 PDNFFSSMALTNLNLSGNGFS---------GAIPLRSSHASELLVLPSYPPMESLDLSGN 168
++F + L L + G S L + L +
Sbjct: 237 DESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQF 296
Query: 169 ALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSL 228
L L + + +++ + + N+ + S L +LE+LDLS N E +
Sbjct: 297 YLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSAC 356
Query: 229 -----KLNEFNVSYNDLS 241
L +S N L
Sbjct: 357 KGAWPSLQTLVLSQNHLR 374
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 7e-15
Identities = 41/287 (14%), Positives = 96/287 (33%), Gaps = 46/287 (16%)
Query: 8 TTLSVLNLSSNSLSGTLPTS----LKSCVILDLSRNMISG-DISDMQNWEANLEILDLSS 62
+L L+LS N LS +L +S L S L+L N ++ + NL+ L + +
Sbjct: 74 GSLEHLDLSDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGN 132
Query: 63 NKLSGSLPNLT-SQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNF 121
+ + + + L+ I+ S+ L+ + L + ++ + + F
Sbjct: 133 VETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF-LLEIF 191
Query: 122 FSSM-ALTNLNLSGN----------------------GFSGAIPLRSSHASELLVLPSYP 158
+ ++ L L F G++ S L +L
Sbjct: 192 ADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYIL 251
Query: 159 PMESLDLSGNALTGVLPSD------IGNMGRLRLLNLANNHLSG-----KMPSELSKLGA 207
+ ++ L G+ + + +G++ + + H+ + + S L
Sbjct: 252 ELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEK 311
Query: 208 LEYLDLSGNQFK---GEIPDKLSLKLNEFNVSYNDLSGPIPENLRNF 251
++ + + ++ L L ++S N + +N
Sbjct: 312 VKRITVENSKVFLVPCSFSQHLK-SLEFLDLSENLMVEEYLKNSACK 357
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 2e-08
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 126 ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLR 185
A + F+ +IP L + M+SLDLS N +T + D+ L+
Sbjct: 6 ASGVCDGRSRSFT-SIPSG---------LTAA--MKSLDLSFNKITYIGHGDLRACANLQ 53
Query: 186 LLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKL---SLKLNEFNVSYNDLS 241
+L L ++ ++ LG+LE+LDLS N + L N+ N
Sbjct: 54 VLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQ 111
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 15/104 (14%)
Query: 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQ 217
D + T + PS + ++ L+L+ N ++ +L L+ L L ++
Sbjct: 5 DASGVCDGRSRSFTSI-PSGL--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSR 61
Query: 218 FKGEIPDKL--SLK-LNEFNVSYNDLSGPIPENLRNFPKSSFHP 258
I SL L ++S N +L + S F P
Sbjct: 62 IN-TIEGDAFYSLGSLEHLDLSDN--------HLSSLSSSWFGP 96
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 94.8 bits (236), Expect = 1e-20
Identities = 50/260 (19%), Positives = 81/260 (31%), Gaps = 30/260 (11%)
Query: 12 VLNLSSNSLS---GTLPTSLKSCVILDLSRNMIS----GDISDMQNWEANLEILDLSSNK 64
+ LP S K+ LDLS N + L++LDLS +
Sbjct: 11 TYQCMELNFYKIPDNLPFSTKN---LDLSFNPLRHLGSYSFFSFPE----LQVLDLSRCE 63
Query: 65 LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSS 124
+ LST + N + L L L + +
Sbjct: 64 IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLAS-LENFPIGH 122
Query: 125 M-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGR 183
+ L LN++ N L + +E LDLS N + + +D+ + +
Sbjct: 123 LKTLKELNVAHNLIQ-----SFKLPEYFSNLTN---LEHLDLSSNKIQSIYCTDLRVLHQ 174
Query: 184 LRL----LNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYND 239
+ L L+L+ N ++ P ++ L L L N + L V
Sbjct: 175 MPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLV 233
Query: 240 LSGPIPEN-LRNFPKSSFHP 258
L E L F KS+
Sbjct: 234 LGEFRNEGNLEKFDKSALEG 253
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 1e-18
Identities = 53/262 (20%), Positives = 101/262 (38%), Gaps = 25/262 (9%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQN--WEANLEIL 58
++ G+ + T+ L+ L +C+ S +++S I +++ + + L
Sbjct: 250 ALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHL 309
Query: 59 DLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQL--KGP 116
+L + K P L + L +N G S +++ P L LD+S N L KG
Sbjct: 310 ELVNCKFG-QFPTL--KLKSLKRLTFTSNK-GGNAFSEVDL-PSLEFLDLSRNGLSFKGC 364
Query: 117 IPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPS 176
+ F + +L L+LS NG + +L E LD + L +
Sbjct: 365 CSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQL---------EHLDFQHSNLKQMSEF 414
Query: 177 DI-GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIP----DKLSLKLN 231
+ ++ L L++++ H + L +LE L ++GN F+ +L L
Sbjct: 415 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR-NLT 473
Query: 232 EFNVSYNDLSGPIPENLRNFPK 253
++S L P +
Sbjct: 474 FLDLSQCQLEQLSPTAFNSLSS 495
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 5e-17
Identities = 43/204 (21%), Positives = 72/204 (35%), Gaps = 27/204 (13%)
Query: 4 GINSTTLSVLNLSSNSLSGTLPTS-----LKSCVILDLSRN---MISGDISDMQNWEANL 55
++ +L L+LS N LS S S LDLS N +S + ++ L
Sbjct: 343 EVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQ----L 398
Query: 56 EILDLSSNKLSGSLPNLTSQFDRLS---TFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ 112
E LD + L + S F L +I + + L L ++ N
Sbjct: 399 EHLDFQHSNLK-QMSE-FSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 456
Query: 113 LKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT 171
+ + F+ + LT L+LS L + L S ++ L+++ N L
Sbjct: 457 FQENFLPDIFTELRNLTFLDLSQCQ------LEQLSPTAFNSLSS---LQVLNMASNQLK 507
Query: 172 GVLPSDIGNMGRLRLLNLANNHLS 195
V + L+ + L N
Sbjct: 508 SVPDGIFDRLTSLQKIWLHTNPWD 531
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 91.9 bits (228), Expect = 1e-20
Identities = 56/257 (21%), Positives = 96/257 (37%), Gaps = 35/257 (13%)
Query: 5 INSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK 64
I S +L L + + + + +L +S L+ L L + +
Sbjct: 65 IKSLSLKRLTVRAARIPSRILFGALR--VLGISG----------------LQELTLENLE 106
Query: 65 LSGSLPNLTSQFD--RLSTFNIRNNSVTGTLPSLLEIS----PRLVTLDVSSNQLKGPIP 118
++G+ P + L+ N+RN S L E+ P L L ++
Sbjct: 107 VTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSC 166
Query: 119 DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT---GVLP 175
+ AL+ L+LS N G L L +P ++ L L + GV
Sbjct: 167 EQVRVFPALSTLDLSDNPELGERGL-----ISALCPLKFPTLQVLALRNAGMETPSGVCS 221
Query: 176 SDIGNMGRLRLLNLANNHLSGKMPSEL-SKLGALEYLDLSGNQFKGEIPDKLSLKLNEFN 234
+ +L+ L+L++N L + L L+LS K ++P L KL+ +
Sbjct: 222 ALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAKLSVLD 280
Query: 235 VSYNDLSG-PIPENLRN 250
+SYN L P P+ L
Sbjct: 281 LSYNRLDRNPSPDELPQ 297
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 2e-18
Identities = 50/232 (21%), Positives = 86/232 (37%), Gaps = 29/232 (12%)
Query: 5 INSTTLSVLNLSSNSLSGTLPTSL-----KSCVILDLSRNMISG---DISDMQNW-EANL 55
+ + L L L + ++GT P L IL+L + ++++Q W + L
Sbjct: 92 LGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGL 151
Query: 56 EILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPR----LVTLDVSSN 111
++L ++ F LST ++ +N G + + P L L + +
Sbjct: 152 KVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNA 211
Query: 112 QLK---GPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGN 168
++ G + + L L+LS N A S L SL+LS
Sbjct: 212 GMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQL--------NSLNLSFT 263
Query: 169 ALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKG 220
L V P + +L +L+L+ N L +L + L L GN F
Sbjct: 264 GLKQV-PKGLPA--KLSVLDLSYNRLDRN--PSPDELPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 83.8 bits (207), Expect = 7e-18
Identities = 45/215 (20%), Positives = 70/215 (32%), Gaps = 37/215 (17%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGT----------LPTSLKSCVILDLSRNMISGDISDMQN 50
+ L++LNL + S + L LK L +++ +
Sbjct: 114 PLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKV---LSIAQAHSLNFSCEQVR 170
Query: 51 WEANLEILDLSSNKLSGSLPNLTS----QFDRLSTFNIRNN---SVTGTLPSLLEISPRL 103
L LDLS N G +++ +F L +RN + +G +L +L
Sbjct: 171 VFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQL 230
Query: 104 VTLDVSSNQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPM-E 161
LD+S N L+ L +LNLS G V P
Sbjct: 231 QGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQ-------------VPKGLPAKLS 277
Query: 162 SLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSG 196
LDLS N L + ++ L+L N
Sbjct: 278 VLDLSYNRLDRN--PSPDELPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 65.7 bits (160), Expect = 8e-12
Identities = 35/144 (24%), Positives = 57/144 (39%), Gaps = 16/144 (11%)
Query: 8 TTLSVLNLSSNSLSGTL-------PTSLKSCVILDLSRNM---ISGDISDMQNWEANLEI 57
LS L+LS N G P + +L L SG S + L+
Sbjct: 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQG 232
Query: 58 LDLSSNKLSGSLPNLTSQF-DRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGP 116
LDLS N L + + + +L++ N+ + +P + +L LD+S N+L
Sbjct: 233 LDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPK--GLPAKLSVLDLSYNRLDRN 289
Query: 117 IPDNFFSSMALTNLNLSGNGFSGA 140
+ + NL+L GN F +
Sbjct: 290 PSPDELPQ--VGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 1e-11
Identities = 33/216 (15%), Positives = 67/216 (31%), Gaps = 20/216 (9%)
Query: 54 NLEILDLSSNKLSGSLPNL-TSQFDRLSTFNIRNNSVTG-TLPSLLEI--SPRLVTLDVS 109
+LE L + + + L +R + L L + L L +
Sbjct: 44 SLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLE 103
Query: 110 SNQLKGPIPDNFF--SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSG 167
+ ++ G P + L LNL ++ + L P ++ L ++
Sbjct: 104 NLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLK-----PGLKVLSIAQ 158
Query: 168 NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELS----KLGALEYLDLSGNQFK---G 220
+ L L+L++N G+ + K L+ L L + G
Sbjct: 159 AHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSG 218
Query: 221 EIPDKLSL--KLNEFNVSYNDLSGPIPENLRNFPKS 254
+ +L ++S+N L ++P
Sbjct: 219 VCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQ 254
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 6e-09
Identities = 38/220 (17%), Positives = 66/220 (30%), Gaps = 31/220 (14%)
Query: 51 WEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSS 110
W + L + +L G +L + T + SL L L V +
Sbjct: 24 WSSAFNCLGAADVELYGGGRSLE-YLLKRVDTEADLGQFTDIIKSL-----SLKRLTVRA 77
Query: 111 NQLKGPIPDNFFSSMA---LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSG 167
++ I + L L L +G P L+ + P + L+L
Sbjct: 78 ARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP-------LLEATGPDLNILNLRN 130
Query: 168 NALTGVLPSDIGNMG-----RLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEI 222
+ + + + L++L++A H ++ AL LDLS N GE
Sbjct: 131 VSWAT-RDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER 189
Query: 223 PDKLSL------KLNEFNVSYN---DLSGPIPENLRNFPK 253
+L L + SG +
Sbjct: 190 GLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQ 229
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 93.7 bits (233), Expect = 1e-20
Identities = 51/225 (22%), Positives = 85/225 (37%), Gaps = 35/225 (15%)
Query: 7 STTLSVLNLSSNSLSGTLP----TSLKSCVILDLSRNMIS----GDISDMQNWEANLEIL 58
+ LNL N++ + L +L L RN I G + + + L L
Sbjct: 74 PSNTRYLNLMENNIQ-MIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLAS----LNTL 128
Query: 59 DLSSNKLS----GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSS-NQL 113
+L N L+ G+ L+ L +RNN + P L+ LD+ +L
Sbjct: 129 ELFDNWLTVIPSGAFEYLSK----LRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKL 184
Query: 114 KGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTG 172
+ I + F + L LNL +P L L +E L++SGN
Sbjct: 185 EY-ISEGAFEGLFNLKYLNLGMCNIK-DMP-------NLTPLVG---LEELEMSGNHFPE 232
Query: 173 VLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQ 217
+ P + L+ L + N+ +S + L +L L+L+ N
Sbjct: 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNN 277
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 1e-10
Identities = 36/182 (19%), Positives = 59/182 (32%), Gaps = 38/182 (20%)
Query: 99 ISPRLVTLDVSSNQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSY 157
I L++ N ++ I + F + L L L N +R L S
Sbjct: 73 IPSNTRYLNLMENNIQM-IQADTFRHLHHLEVLQLGRNS------IRQIEVGAFNGLAS- 124
Query: 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLS---GKMPSELSKL--------- 205
+ +L+L N LT + + +LR L L NN + + + L
Sbjct: 125 --LNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELK 182
Query: 206 -------------GALEYLDLSGNQFKGEIPDKLSLK-LNEFNVSYNDLSGPIPENLRNF 251
L+YL+L K ++P+ L L E +S N P +
Sbjct: 183 KLEYISEGAFEGLFNLKYLNLGMCNIK-DMPNLTPLVGLEELEMSGNHFPEIRPGSFHGL 241
Query: 252 PK 253
Sbjct: 242 SS 243
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 92.5 bits (230), Expect = 3e-20
Identities = 56/225 (24%), Positives = 88/225 (39%), Gaps = 35/225 (15%)
Query: 7 STTLSVLNLSSNSLSGTLP----TSLKSCVILDLSRNMIS----GDISDMQNWEANLEIL 58
ST +LNL N + + L+ IL LSRN I G + + N L L
Sbjct: 63 STNTRLLNLHENQIQ-IIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLAN----LNTL 117
Query: 59 DLSSNKLS----GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSS-NQL 113
+L N+L+ G+ L+ L +RNN + P L LD+ +L
Sbjct: 118 ELFDNRLTTIPNGAFVYLSK----LKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRL 173
Query: 114 KGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTG 172
I + F + L LNL+ IP L L ++ LDLSGN L+
Sbjct: 174 SY-ISEGAFEGLSNLRYLNLAMCNLR-EIP-------NLTPLIK---LDELDLSGNHLSA 221
Query: 173 VLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQ 217
+ P + L+ L + + + + L +L ++L+ N
Sbjct: 222 IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNN 266
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 3e-15
Identities = 48/214 (22%), Positives = 82/214 (38%), Gaps = 24/214 (11%)
Query: 53 ANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ 112
N +L+L N++ N L + N + L TL++ N+
Sbjct: 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123
Query: 113 LKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSG-NAL 170
L IP+ F + L L L N P+ S + +PS + LDL L
Sbjct: 124 LTT-IPNGAFVYLSKLKELWLRNN------PIESIPSYAFNRIPS---LRRLDLGELKRL 173
Query: 171 TGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--L 228
+ + + LR LNLA +L ++P+ L+ L L+ LDLSGN P +
Sbjct: 174 SYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLM 231
Query: 229 KLNEFNVSYNDLSGPIPENLRNFPKSSFHPGNAL 262
L + + + ++ +++F +L
Sbjct: 232 HLQKLWMIQS--------QIQVIERNAFDNLQSL 257
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 5e-11
Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 20/173 (11%)
Query: 99 ISPRLVTLDVSSNQLKGPIPDNFFSSM-ALTNLNLSGNG--------FSGAIPLRSSHAS 149
IS L++ NQ++ I N F + L L LS N F+G L +
Sbjct: 62 ISTNTRLLNLHENQIQI-IKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120
Query: 150 --ELLVLPSY-----PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLAN-NHLSGKMPSE 201
L +P+ ++ L L N + + + LR L+L LS
Sbjct: 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGA 180
Query: 202 LSKLGALEYLDLSGNQFKGEIPDKLSL-KLNEFNVSYNDLSGPIPENLRNFPK 253
L L YL+L+ + EIP+ L KL+E ++S N LS P + +
Sbjct: 181 FEGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMH 232
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 1e-08
Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 16/137 (11%)
Query: 8 TTLSVLNLSSNSLSGTLP----TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSN 63
+L L+L + L + L+L+ + +I ++ L+ LDLS N
Sbjct: 160 PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPL-IKLDELDLSGN 217
Query: 64 KLS----GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPD 119
LS GS L L + + + + + LV ++++ N L +P
Sbjct: 218 HLSAIRPGSFQGLMH----LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL-LPH 272
Query: 120 NFFSSM-ALTNLNLSGN 135
+ F+ + L ++L N
Sbjct: 273 DLFTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Query: 151 LLVLPSY--PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGAL 208
L +P L+L N + + + ++ L +L L+ NH+ + L L
Sbjct: 55 LREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANL 114
Query: 209 EYLDLSGNQFKGEIPDKL---SLKLNEFNVSYNDLS 241
L+L N+ IP+ KL E + N +
Sbjct: 115 NTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIE 149
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 1e-05
Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 11/112 (9%)
Query: 8 TTLSVLNLSSNSLSGTLPT--SLKSCVILDLSRNMIS----GDISDMQNWEANLEILDLS 61
+ L LNL+ +L +P L LDLS N +S G + + L+ L +
Sbjct: 185 SNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMH----LQKLWMI 239
Query: 62 SNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQL 113
+++ N L N+ +N++T L L + + N
Sbjct: 240 QSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 291
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 93.5 bits (232), Expect = 3e-20
Identities = 53/244 (21%), Positives = 92/244 (37%), Gaps = 30/244 (12%)
Query: 10 LSVLNLSSNSLSGTLPTSLKSCVILDLSRNMIS---GDISDMQNWEANLEILDLSSNKLS 66
++VL ++ N+L +LP S LD N +S + +L+ LD+ +N+L+
Sbjct: 82 ITVLEITQNALI-SLPELPASLEYLDACDNRLSTLPELPA-------SLKHLDVDNNQLT 133
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA 126
LP L + L N NN +T LP L L L V +NQL +P+ S
Sbjct: 134 -MLPELPAL---LEYINADNNQLT-MLPELP---TSLEVLSVRNNQLTF-LPELPES--- 181
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRL 186
L L++S N ++P + N +T +P +I ++
Sbjct: 182 LEALDVSTNLLE-SLPAVPVRNHHSEETEIF-----FRCRENRIT-HIPENILSLDPTCT 234
Query: 187 LNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPE 246
+ L +N LS ++ LS+ A F + +L +
Sbjct: 235 IILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQS 294
Query: 247 NLRN 250
++
Sbjct: 295 DVSQ 298
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 90.8 bits (225), Expect = 2e-19
Identities = 52/231 (22%), Positives = 87/231 (37%), Gaps = 38/231 (16%)
Query: 24 LPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSS---NKLSGSLPNLTSQFDRLS 80
LP + + + N ISG +D + E L N+ L ++ S
Sbjct: 5 LPINNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKE--CLINQFS 62
Query: 81 TFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGA 140
+ +++ +LP + P++ L+++ N L +P+ S L L+ N
Sbjct: 63 ELQLNRLNLS-SLPD--NLPPQITVLEITQNALI-SLPELPAS---LEYLDACDN----- 110
Query: 141 IPLRSSHASELLVLPSYPP-MESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMP 199
L LP P ++ LD+ N LT +LP L +N NN L+ +P
Sbjct: 111 ---------RLSTLPELPASLKHLDVDNNQLT-MLPELPAL---LEYINADNNQLT-MLP 156
Query: 200 SELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPENLRN 250
+ LE L + NQ +P+ L +VS N L +P
Sbjct: 157 ELPTS---LEVLSVRNNQLT-FLPELPE-SLEALDVSTNLLES-LPAVPVR 201
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 4e-20
Identities = 57/269 (21%), Positives = 102/269 (37%), Gaps = 43/269 (15%)
Query: 7 STTLSVLNLSSNSLSGTLP----TSLKSCVILDLSRNMIS----GDISDMQNWEANLEIL 58
++L+L +N ++ + +LK+ L L N IS G + + LE L
Sbjct: 51 PPDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVK----LERL 105
Query: 59 DLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLK-GPI 117
LS N+L LP L + N +T S+ +++ +++ +N LK I
Sbjct: 106 YLSKNQLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGI 162
Query: 118 PDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPP-MESLDLSGNALTGVLP 175
+ F M L+ + ++ + IP PP + L L GN +T V
Sbjct: 163 ENGAFQGMKKLSYIRIADTNIT-TIP------------QGLPPSLTELHLDGNKITKVDA 209
Query: 176 SDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEF 233
+ + + L L L+ N +S L+ L L L+ N+ ++P L+ +
Sbjct: 210 ASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVV 268
Query: 234 NVSYNDLSGPIPENLRNFPKSSFHPGNAL 262
+ N N+ + F P
Sbjct: 269 YLHNN--------NISAIGSNDFCPPGYN 289
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 5e-19
Identities = 44/232 (18%), Positives = 82/232 (35%), Gaps = 45/232 (19%)
Query: 6 NSTTLSVLNLSSNSLS---GTLPTSLKSCVILDLSRNMIS----GDISDMQNWEANLEIL 58
L L LS N L +P +L+ L + N I+ + + + ++
Sbjct: 98 PLVKLERLYLSKNQLKELPEKMPKTLQE---LRVHENEITKVRKSVFNGLN----QMIVV 150
Query: 59 DLSSNKLS------GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ 112
+L +N L G+ + LS I + ++T L P L L + N+
Sbjct: 151 ELGTNPLKSSGIENGAFQGMKK----LSYIRIADTNITTIPQGLP---PSLTELHLDGNK 203
Query: 113 LKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT 171
+ + + L L LS N + + L P + L L+ N L
Sbjct: 204 ITK-VDAASLKGLNNLAKLGLSFN------SISAVDNGSLANTPH---LRELHLNNNKLV 253
Query: 172 GVLPSDIGNMGRLRLLNLANNHLSG------KMPSELSKLGALEYLDLSGNQ 217
+P + + ++++ L NN++S P +K + + L N
Sbjct: 254 -KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNP 304
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 2e-12
Identities = 34/196 (17%), Positives = 61/196 (31%), Gaps = 44/196 (22%)
Query: 6 NSTTLSVLNLSSNSLSG---TLPTSLKSCVILDLSRNMIS----GDISDMQNWEANLEIL 58
LS + ++ +++ LP SL L L N I+ + + NL L
Sbjct: 169 GMKKLSYIRIADTNITTIPQGLPPSLTE---LHLDGNKITKVDAASLKGLN----NLAKL 221
Query: 59 DLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIP 118
LS N +S ++ N + P L L +++N+L +P
Sbjct: 222 GLSFNSIS-AVDNGS--LANT---------------------PHLRELHLNNNKLVK-VP 256
Query: 119 DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNAL--TGVLPS 176
+ + L N S + S+ + L N + + PS
Sbjct: 257 GGLADHKYIQVVYLHNNNISA---IGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPS 313
Query: 177 DIGNMGRLRLLNLANN 192
+ + L N
Sbjct: 314 TFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 3e-11
Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 17/158 (10%)
Query: 99 ISPRLVTLDVSSNQLKGPIPDNFFSSM-ALTNLNLSGNG--------FSGAIPLRSSHAS 149
+ P LD+ +N++ I D F ++ L L L N F+ + L + S
Sbjct: 50 LPPDTALLDLQNNKITE-IKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108
Query: 150 --ELLVLPSYPP--MESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKM--PSELS 203
+L LP P ++ L + N +T V S + ++ ++ L N L
Sbjct: 109 KNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 168
Query: 204 KLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLS 241
+ L Y+ ++ IP L L E ++ N ++
Sbjct: 169 GMKKLSYIRIADTNIT-TIPQGLPPSLTELHLDGNKIT 205
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 2e-19
Identities = 50/235 (21%), Positives = 92/235 (39%), Gaps = 32/235 (13%)
Query: 8 TTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISG-DISDMQNWEANLEILDLSSNKLS 66
T L+ L +SN+++ + + L N ++ D++ + L L+ +NKL+
Sbjct: 64 TGLTKLICTSNNITTLDLSQNTNLTYLACDSNKLTNLDVTPLT----KLTYLNCDTNKLT 119
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA 126
L SQ L+ N N++T + + + +L LD N+ +
Sbjct: 120 -KLD--VSQNPLLTYLNCARNTLT-EID--VSHNTQLTELDCHLNKKITKLD--VTPQTQ 171
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRL 186
LT L+ S N + + + S L L+ N +T + D+ +L
Sbjct: 172 LTTLDCSFNKIT-ELDV--SQNKLL---------NRLNCDTNNITKL---DLNQNIQLTF 216
Query: 187 LNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLS 241
L+ ++N L+ +++ L L Y D S N E+ KL + DL
Sbjct: 217 LDCSSNKLTE---IDVTPLTQLTYFDCSVNPLT-ELDVSTLSKLTTLHCIQTDLL 267
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 87.1 bits (216), Expect = 2e-18
Identities = 51/255 (20%), Positives = 95/255 (37%), Gaps = 28/255 (10%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKL 65
N + + L + LD + I+ D++ ++ L L +SN +
Sbjct: 19 NFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSIT-DMTGIEKLT-GLTKLICTSNNI 76
Query: 66 SGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM 125
+ +L SQ L+ +N +T L + +L L+ +N+L + +
Sbjct: 77 T-TLD--LSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDTNKLT---KLDVSQNP 127
Query: 126 ALTNLNLSGNGFS----------GAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLP 175
LT LN + N + + + L + + +LD S N +T +
Sbjct: 128 LLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITEL-- 185
Query: 176 SDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNV 235
D+ L LN N+++ +L++ L +LD S N+ EI +L F+
Sbjct: 186 -DVSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLT-EIDVTPLTQLTYFDC 240
Query: 236 SYNDLSGPIPENLRN 250
S N L+ L
Sbjct: 241 SVNPLTELDVSTLSK 255
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 80.5 bits (199), Expect = 3e-16
Identities = 51/247 (20%), Positives = 88/247 (35%), Gaps = 29/247 (11%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISG-DISDMQNWEANLEILDLSSNK 64
T L+ L+ S N ++ + K L+ N I+ D++ L LD SSNK
Sbjct: 168 PQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITKLDLNQNIQ----LTFLDCSSNK 223
Query: 65 LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSS 124
L+ + + +L+ F+ N +T L + +L TL L I +
Sbjct: 224 LT-EID--VTPLTQLTYFDCSVNPLT-ELD--VSTLSKLTTLHCIQTDLLE-IDLTHNTQ 276
Query: 125 MALTNLNLSGNGFSGAIPLRSSHASELLVL----------PSYPPMESLDLSGNALTGVL 174
L G + + + LL P + L L+ LT +
Sbjct: 277 --LIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL- 333
Query: 175 PSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFN 234
D+ + +L+ L+ N H+ S + K+ AL + Q + L+
Sbjct: 334 --DVSHNTKLKSLSCVNAHIQD--FSSVGKIPALNNNFEAEGQTITMPKETLTNNSLTIA 389
Query: 235 VSYNDLS 241
VS + L
Sbjct: 390 VSPDLLD 396
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 5e-16
Identities = 48/244 (19%), Positives = 90/244 (36%), Gaps = 35/244 (14%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISG-DISDMQNWEANLEILD 59
++ T L+ LN +N L+ + L+ +RN ++ D+S L LD
Sbjct: 99 NLDVTPLTKLTYLNCDTNKLTKLDVSQNPLLTYLNCARNTLTEIDVSHNT----QLTELD 154
Query: 60 LSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEIS--PRLVTLDVSSNQLKGPI 117
NK L + +L+T + N +T L++S L L+ +N +
Sbjct: 155 CHLNKKITKLDV--TPQTQLTTLDCSFNKITE-----LDVSQNKLLNRLNCDTNNITKL- 206
Query: 118 PDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSD 177
+ ++ LT L+ S N + I + L + D S N LT + D
Sbjct: 207 --DLNQNIQLTFLDCSSNKLT-EIDVTP--------LTQ---LTYFDCSVNPLTEL---D 249
Query: 178 IGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSY 237
+ + +L L+ L +L+ L Y G + E+ + +L +
Sbjct: 250 VSTLSKLTTLHCIQTDLLE---IDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQA 306
Query: 238 NDLS 241
++
Sbjct: 307 AGIT 310
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 2e-14
Identities = 39/247 (15%), Positives = 75/247 (30%), Gaps = 32/247 (12%)
Query: 6 NSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK 64
+ L+ L+ SSN L+ + T L D S N ++ ++ + L L
Sbjct: 210 QNIQLTFLDCSSNKLT-EIDVTPLTQLTYFDCSVNPLT-ELDVSTL--SKLTTLHCIQTD 265
Query: 65 LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSS 124
L + + +L F L + + +L LD + + + +
Sbjct: 266 LL-EIDL--THNTQLIYFQAEGCRKIKELD--VTHNTQLYLLDCQAAGIT---ELDLSQN 317
Query: 125 MALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRL 184
L L L+ + + + ++SL + S +G + L
Sbjct: 318 PKLVYLYLNNTELT-ELDVSH--------NTK---LKSLSCVNAHIQDF--SSVGKIPAL 363
Query: 185 RLLNLANNHLSGKMPSELSKLG-----ALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYND 239
A L+ + + LD GN E D +++ +
Sbjct: 364 NNNFEAEGQTITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEPGDGGVYDQATNTITWEN 423
Query: 240 LSGPIPE 246
LS P
Sbjct: 424 LSTDNPA 430
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 1e-12
Identities = 35/191 (18%), Positives = 67/191 (35%), Gaps = 27/191 (14%)
Query: 53 ANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEIS--PRLVTLDVSS 110
N ++ ++ + Q L++ + N+S+T + I L L +S
Sbjct: 18 DNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSIT----DMTGIEKLTGLTKLICTS 73
Query: 111 NQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNAL 170
N + + + LT L N + L + + L+ N L
Sbjct: 74 NNITTL---DLSQNTNLTYLACDSNKLTN------------LDVTPLTKLTYLNCDTNKL 118
Query: 171 TGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKL 230
T + D+ L LN A N L+ ++S L LD N+ ++ +L
Sbjct: 119 TKL---DVSQNPLLTYLNCARNTLT---EIDVSHNTQLTELDCHLNKKITKLDVTPQTQL 172
Query: 231 NEFNVSYNDLS 241
+ S+N ++
Sbjct: 173 TTLDCSFNKIT 183
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 3e-19
Identities = 47/218 (21%), Positives = 74/218 (33%), Gaps = 17/218 (7%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSL-KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK 64
N ++ + L +P + + + L N IS + NL IL L SN
Sbjct: 10 NEPKVTT-SCPQQGLQ-AVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNV 67
Query: 65 LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPS-LLEISPRLVTLDVSSNQLKGPIPDNFFS 123
L+ + L ++ +N+ ++ RL TL + L+ + F
Sbjct: 68 LARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQE-LGPGLFR 126
Query: 124 SM-ALTNLNLSGNGFSGAIPLRS-SHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNM 181
+ AL L L N A+P + L L L GN ++ V +
Sbjct: 127 GLAALQYLYLQDNALQ-ALPDDTFRDLGNL---------THLFLHGNRISSVPERAFRGL 176
Query: 182 GRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFK 219
L L L N ++ P LG L L L N
Sbjct: 177 HSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 214
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 5e-18
Identities = 60/227 (26%), Positives = 93/227 (40%), Gaps = 35/227 (15%)
Query: 7 STTLSVLNLSSNSLSGTLPTS----LKSCVILDLSRNMIS----GDISDMQNWEANLEIL 58
+ L N +S +P + ++ IL L N+++ + + LE L
Sbjct: 31 PAASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLAL----LEQL 85
Query: 59 DLSSNKLSGSLPNLT-SQFDRLSTFNIRNNSVT----GTLPSLLEISPRLVTLDVSSNQL 113
DLS N S+ T RL T ++ + G L L L + N L
Sbjct: 86 DLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGL----AALQYLYLQDNAL 141
Query: 114 KGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRS-SHASELLVLPSYPPMESLDLSGNALT 171
+ +PD+ F + LT+L L GN S ++P R+ L + L L N +
Sbjct: 142 QA-LPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSL---------DRLLLHQNRVA 190
Query: 172 GVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQF 218
V P ++GRL L L N+LS L+ L AL+YL L+ N +
Sbjct: 191 HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPW 237
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 87.1 bits (216), Expect = 4e-19
Identities = 47/250 (18%), Positives = 92/250 (36%), Gaps = 25/250 (10%)
Query: 8 TTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
+ ++++ T+ L L ++ I +Q NL L+L N+++
Sbjct: 19 ANAIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVT-TIEGVQYLN-NLIGLELKDNQIT 76
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA 126
L L +++ + N + + ++ + + TLD++S Q+ P S+
Sbjct: 77 -DLAPL-KNLTKITELELSGNPLK-NVSAIAGL-QSIKTLDLTSTQITDVTPLAGLSN-- 130
Query: 127 LTNLNLSGNGFSGAIPLRSSHA-----------SELLVLPSYPPMESLDLSGNALTGVLP 175
L L L N + PL S+L L + + +L N ++ +
Sbjct: 131 LQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI-- 188
Query: 176 SDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNV 235
S + ++ L ++L NN +S S L+ L + L+ P + L NV
Sbjct: 189 SPLASLPNLIEVHLKNNQISDV--SPLANTSNLFIVTLTNQTIT-NQPVFYNNNLVVPNV 245
Query: 236 SYNDLSGPIP 245
PI
Sbjct: 246 VKGPSGAPIA 255
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 3e-13
Identities = 40/210 (19%), Positives = 80/210 (38%), Gaps = 23/210 (10%)
Query: 45 ISDMQNWE--ANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPR 102
I+ + AN + + ++ + D ++T + VT T+ + +
Sbjct: 9 INVIFPDPALANAIKIAAGKSNVT-DTVTQ-ADLDGITTLSAFGTGVT-TIEGVQYL-NN 64
Query: 103 LVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLR-----------SSHASEL 151
L+ L++ NQ+ P + +T L LSGN + S+ +++
Sbjct: 65 LIGLELKDNQITDLAPLKNLTK--ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 122
Query: 152 LVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYL 211
L ++ L L N +T + S + + L+ L++ N +S + L+ L L L
Sbjct: 123 TPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSD--LTPLANLSKLTTL 178
Query: 212 DLSGNQFKGEIPDKLSLKLNEFNVSYNDLS 241
N+ P L E ++ N +S
Sbjct: 179 KADDNKISDISPLASLPNLIEVHLKNNQIS 208
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 4e-09
Identities = 38/201 (18%), Positives = 85/201 (42%), Gaps = 25/201 (12%)
Query: 6 NSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK 64
++ L+L+S ++ P L + +L L N I+ +IS + NL+ L + + +
Sbjct: 105 GLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQIT-NISPLAGLT-NLQYLSIGNAQ 162
Query: 65 LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSS 124
+S L L + +L+T +N ++ + L + P L+ + + +NQ+ P S+
Sbjct: 163 VS-DLTPL-ANLSKLTTLKADDNKIS-DISPLASL-PNLIEVHLKNNQISDVSPLANTSN 218
Query: 125 MALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRL 184
L + L+ + +++ V+ SG + P+ I + G
Sbjct: 219 --LFIVTLTNQTITNQPVFYNNNLVVPNVV--------KGPSGAPIA---PATISDNG-- 263
Query: 185 RLLNLANNHLSGKMPSELSKL 205
A+ +L+ + S ++ +
Sbjct: 264 ---TYASPNLTWNLTSFINNV 281
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 21/143 (14%), Positives = 48/143 (33%), Gaps = 18/143 (12%)
Query: 109 SSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGN 168
+ PD ++ + + + + ++L + +L G
Sbjct: 5 QPTAINVIFPDPALAN--AIKIAAGKSNVTDTVTQ-----ADLDGI------TTLSAFGT 51
Query: 169 ALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSL 228
+T + + + L L L +N ++ + L L + L+LSGN K
Sbjct: 52 GVTTI--EGVQYLNNLIGLELKDNQIT--DLAPLKNLTKITELELSGNPLKNVSAIAGLQ 107
Query: 229 KLNEFNVSYNDLSGPIP-ENLRN 250
+ +++ ++ P L N
Sbjct: 108 SIKTLDLTSTQITDVTPLAGLSN 130
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 87.1 bits (215), Expect = 4e-18
Identities = 43/284 (15%), Positives = 92/284 (32%), Gaps = 40/284 (14%)
Query: 8 TTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
NL S++ + L S + + + I + +Q N+ L L+ NKL+
Sbjct: 21 AETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIK-SVQGIQYLP-NVTKLFLNGNKLT 78
Query: 67 -----GSLPNLT---------------SQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTL 106
+L NL +L + ++ +N ++ + L P+L +L
Sbjct: 79 DIKPLTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGIS-DINGL-VHLPQLESL 136
Query: 107 DVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLS 166
+ +N++ L L+L N S +++ L +++L LS
Sbjct: 137 YLGNNKIT--DITVLSRLTKLDTLSLEDNQIS-----------DIVPLAGLTKLQNLYLS 183
Query: 167 GNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKL 226
N ++ + + + L +L L + K + S L + +
Sbjct: 184 KNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISD 241
Query: 227 SLKLNEFNVSYNDLSGPIPENLRNFPKSSFHPGNALLIFPDGVP 270
+ NV ++ + + + A P
Sbjct: 242 DGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQP 285
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 78.2 bits (192), Expect = 2e-15
Identities = 40/210 (19%), Positives = 75/210 (35%), Gaps = 27/210 (12%)
Query: 34 LDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTL 93
I I + +L ++ ++ + + N+ +
Sbjct: 4 TITVSTPIK-QIFPDDAFA-ETIKDNLKKKSVT-DAVTQ-NELNSIDQIIANNSDIK--- 56
Query: 94 PSLLEIS--PRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASEL 151
S+ I P + L ++ N+L P + L L L N +L
Sbjct: 57 -SVQGIQYLPNVTKLFLNGNKLTDIKPLTNLKN--LGWLFLDEN-----------KIKDL 102
Query: 152 LVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYL 211
L ++SL L N ++ + + + ++ +L L L NN ++ + LS+L L+ L
Sbjct: 103 SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKIT--DITVLSRLTKLDTL 158
Query: 212 DLSGNQFKGEIPDKLSLKLNEFNVSYNDLS 241
L NQ +P KL +S N +S
Sbjct: 159 SLEDNQISDIVPLAGLTKLQNLYLSKNHIS 188
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 50.1 bits (119), Expect = 1e-06
Identities = 25/127 (19%), Positives = 41/127 (32%), Gaps = 5/127 (3%)
Query: 6 NSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK 64
+ L L L +N ++ + L L L N IS DI + L+ L LS N
Sbjct: 129 HLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQIS-DIVPLAGLT-KLQNLYLSKNH 186
Query: 65 LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSS 124
+S L L + L + + + T+ + L P +
Sbjct: 187 IS-DLRAL-AGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGD 244
Query: 125 MALTNLN 131
N+
Sbjct: 245 YEKPNVK 251
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 49.3 bits (117), Expect = 2e-06
Identities = 30/152 (19%), Positives = 57/152 (37%), Gaps = 21/152 (13%)
Query: 103 LVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMES 162
+ S +K PD+ F+ NL + A+ L S ++
Sbjct: 1 MGETITVSTPIKQIFPDDAFAE--TIKDNLKKKSVTDAVTQNE--------LNS---IDQ 47
Query: 163 LDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEI 222
+ + + + V I + + L L N L+ + L+ L L +L L N+ K ++
Sbjct: 48 IIANNSDIKSV--QGIQYLPNVTKLFLNGNKLT-DI-KPLTNLKNLGWLFLDENKIK-DL 102
Query: 223 PDKLSL-KLNEFNVSYNDLSGPIPENLRNFPK 253
L KL ++ +N +S L + P+
Sbjct: 103 SSLKDLKKLKSLSLEHNGIS--DINGLVHLPQ 132
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 42.8 bits (100), Expect = 3e-04
Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 5/131 (3%)
Query: 6 NSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK 64
T L L+L N +S +P L L LS+N IS D+ + + NL++L+L S +
Sbjct: 151 RLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHIS-DLRALAGLK-NLDVLELFSQE 208
Query: 65 LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSS 124
N S + ++N + P ++ +V + + +F
Sbjct: 209 CLNKPINHQSNLVVPN--TVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFY 266
Query: 125 MALTNLNLSGN 135
+T
Sbjct: 267 QPVTIGKAKAR 277
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 81.3 bits (201), Expect = 4e-17
Identities = 50/244 (20%), Positives = 95/244 (38%), Gaps = 24/244 (9%)
Query: 8 TTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
NL S++ + L S + + + I + +Q N+ L L+ NKL+
Sbjct: 24 AETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIK-SVQGIQYLP-NVTKLFLNGNKLT 81
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA 126
+ L + L + N V L SL ++ +L +L + N + +
Sbjct: 82 -DIKPL-ANLKNLGWLFLDENKVK-DLSSLKDL-KKLKSLSLEHNGIS--DINGLVHLPQ 135
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRL 186
L +L L N + L S ++L ++L L N ++ + + + +L+
Sbjct: 136 LESLYLGNNKITDITVL--SRLTKL---------DTLSLEDNQISDI--VPLAGLTKLQN 182
Query: 187 LNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPE 246
L L+ NH+S L+ L L+ L+L + + + S + V D S PE
Sbjct: 183 LYLSKNHIS--DLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPE 240
Query: 247 NLRN 250
+ +
Sbjct: 241 IISD 244
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 26/135 (19%), Positives = 43/135 (31%), Gaps = 5/135 (3%)
Query: 6 NSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK 64
+ L L L +N ++ + L L L N IS DI + L+ L LS N
Sbjct: 132 HLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQIS-DIVPLAGLT-KLQNLYLSKNH 189
Query: 65 LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSS 124
+S L L + L + + + T+ + L P +
Sbjct: 190 IS-DLRAL-AGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGD 247
Query: 125 MALTNLNLSGNGFSG 139
N+ F+
Sbjct: 248 YEKPNVKWHLPEFTN 262
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 83.4 bits (206), Expect = 4e-17
Identities = 41/215 (19%), Positives = 80/215 (37%), Gaps = 38/215 (17%)
Query: 8 TTLSVLNLSSNSLSGTL---PTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK 64
+ +++ N + + P+ + + LD S N+++ + + LE L L N+
Sbjct: 300 SNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQ 359
Query: 65 LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSS 124
L L + ++ + L LD+S N + S
Sbjct: 360 LK-ELSKIAEMTTQMKS---------------------LQQLDISQNSVSYDEKKGDCSW 397
Query: 125 M-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGR 183
+L +LN+S N L + L ++ LDL N + +P + +
Sbjct: 398 TKSLLSLNMSSNI------LTDTIFRCLPPR-----IKVLDLHSNKIK-SIPKQVVKLEA 445
Query: 184 LRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQF 218
L+ LN+A+N L +L +L+ + L N +
Sbjct: 446 LQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPW 480
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 78.8 bits (194), Expect = 1e-15
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 22/230 (9%)
Query: 5 INSTTLSVLNLSSNSLSGTLP--------TSLKSCVILDLSRNMISGDISDMQNWEANLE 56
+ TT+ ++S+ L G L TSLK+ I + ++ S + +N+
Sbjct: 244 VWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMN 303
Query: 57 ILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKG- 115
I + + + S+ + NN +T T+ L TL + NQLK
Sbjct: 304 IKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKEL 363
Query: 116 PIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVL 174
+ M +L L++S N S + SL++S N LT +
Sbjct: 364 SKIAEMTTQMKSLQQLDISQNSVSYDEKKG--------DCSWTKSLLSLNMSSNILTDTI 415
Query: 175 PSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPD 224
+ R+++L+L +N + +P ++ KL AL+ L+++ NQ K +PD
Sbjct: 416 FRCL--PPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPD 461
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 73.4 bits (180), Expect = 6e-14
Identities = 32/232 (13%), Positives = 73/232 (31%), Gaps = 16/232 (6%)
Query: 15 LSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTS 74
+ +L + S I + W ++ + L +
Sbjct: 214 AKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGT 273
Query: 75 QFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA-LTNLNLS 133
LS + ++ + EI + + + + + + S ++ +L+ S
Sbjct: 274 SLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRM-VHMLCPSKISPFLHLDFS 332
Query: 134 GNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIG---NMGRLRLLNLA 190
N + + L +E+L L N L L M L+ L+++
Sbjct: 333 NNLLT-DTVFENCGH-----LTE---LETLILQMNQLKE-LSKIAEMTTQMKSLQQLDIS 382
Query: 191 NNHL-SGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLS 241
N + + + S +L L++S N I L ++ ++ N +
Sbjct: 383 QNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK 434
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 6e-10
Identities = 45/291 (15%), Positives = 89/291 (30%), Gaps = 29/291 (9%)
Query: 8 TTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMIS-----GDISDMQNWEANLEILDLSS 62
L L+LS N L + LDLS N + +M + L+ L LS+
Sbjct: 69 QELEYLDLSHNKLVKISCHPTVNLKHLDLSFNAFDALPICKEFGNM----SQLKFLGLST 124
Query: 63 NKL-SGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISP--RLVTLDVSSNQLKGPIPD 119
L S+ + + P L+ L + ++ + +
Sbjct: 125 THLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDV 184
Query: 120 NFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLP--SYPPMESLDLSGNALTGVLPSD 177
+ + L N+ S ++L P S + +++ + N+ +L
Sbjct: 185 SVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQ-- 242
Query: 178 IGNMGRLRLLNLANNHLSGKMPSEL-----SKLGALEYLDLSGNQFKGEIPDKLSLKLNE 232
+ + +++N L G++ + L AL + + F + +
Sbjct: 243 LVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFG-FPQSYIYEIFSN 301
Query: 233 FNVSYNDLSG------PIPENLRNFPKSSFHPGNALLIFPDGVPSSATNSQ 277
N+ +SG P + F F N L T +
Sbjct: 302 MNIKNFTVSGTRMVHMLCPSKISPFLHLDFS-NNLLTDTVFENCGHLTELE 351
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 2e-09
Identities = 49/267 (18%), Positives = 86/267 (32%), Gaps = 30/267 (11%)
Query: 7 STTLSVLNLSSNSLSGTLPTSLKSCV---ILDLSRNMISGDISDMQNWEANLEILDLSSN 63
S ++LN+S N +S + + S IL +S N I + + LE LDLS N
Sbjct: 20 SQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79
Query: 64 KLSGSLP--NLTSQFDRLSTFNIRNNSVTGTLPSLLEIS--PRLVTLDVSSNQLKGPIPD 119
KL + + L ++ N+ LP E +L L +S+ L+
Sbjct: 80 KLV-KISCHPTVN----LKHLDLSFNAFD-ALPICKEFGNMSQLKFLGLSTTHLEKSSVL 133
Query: 120 NFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIG 179
L + G + L + + +L +
Sbjct: 134 PIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESL------HIVFPTNKEFHFILDVSVK 187
Query: 180 NMGRLRLLNLANNHLSGKMPSELSKLG-----------ALEYLDLSGNQFKGEIPDKLSL 228
+ L L N+ K LS L L ++ + N F +
Sbjct: 188 TVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHT 247
Query: 229 KLNEFNVSYNDLSGPIPENLRNFPKSS 255
+ F++S L G + ++ +S
Sbjct: 248 TVWYFSISNVKLQGQLDFRDFDYSGTS 274
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 7e-09
Identities = 38/209 (18%), Positives = 63/209 (30%), Gaps = 64/209 (30%)
Query: 53 ANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ 112
IL++S N +S L S LS +L L +S N+
Sbjct: 21 QKTTILNISQNYIS-ELWT--SDILSLS---------------------KLRILIISHNR 56
Query: 113 LKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTG 172
++ + + F L E LDLS N L
Sbjct: 57 IQY-LDISVFKF--NQEL------------------------------EYLDLSHNKLVK 83
Query: 173 VLPSDIGNMGRLRLLNLANNHL-SGKMPSELSKLGALEYLDLSGNQFKGEIPDK---LSL 228
+ L+ L+L+ N + + E + L++L LS + L++
Sbjct: 84 -ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNI 140
Query: 229 KLNEFNVSYNDLSGPIPENLRNFPKSSFH 257
+ PE L++F S H
Sbjct: 141 SKVLLVLGETYGEKEDPEGLQDFNTESLH 169
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 82.6 bits (204), Expect = 8e-17
Identities = 45/231 (19%), Positives = 88/231 (38%), Gaps = 18/231 (7%)
Query: 2 IHGINSTTLSVLNLSSNSLSGTLP--------TSLKSCVILDLSRNMISGDISDMQNWEA 53
+ LN+ + +++ + T+LKS +I + + + + A
Sbjct: 270 FQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFA 329
Query: 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQL 113
+ I LS + + N N T ++ RL TL + N L
Sbjct: 330 EMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGL 389
Query: 114 KGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGV 173
K + +++L + L S + L+LS N LTG
Sbjct: 390 KN-FFKVALMTKNMSSLETLDVSLNS---LNSHAYDRTCAWAE--SILVLNLSSNMLTGS 443
Query: 174 LPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPD 224
+ + ++++L+L NN + +P +++ L AL+ L+++ NQ K +PD
Sbjct: 444 VFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPD 490
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 67.2 bits (164), Expect = 6e-12
Identities = 32/199 (16%), Positives = 69/199 (34%), Gaps = 17/199 (8%)
Query: 51 WEANLEILDLSSNKLSG-----SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVT 105
W +E L++ + ++ + L +++N + +L + +
Sbjct: 274 WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNI 333
Query: 106 LDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDL 165
+S + S + T LN + N F+ S + +++L L
Sbjct: 334 KMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFT---------DSVFQGCSTLKRLQTLIL 384
Query: 166 SGNALTGV--LPSDIGNMGRLRLLNLANNHLSGKMPSEL-SKLGALEYLDLSGNQFKGEI 222
N L + NM L L+++ N L+ + ++ L+LS N G +
Sbjct: 385 QRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV 444
Query: 223 PDKLSLKLNEFNVSYNDLS 241
L K+ ++ N +
Sbjct: 445 FRCLPPKVKVLDLHNNRIM 463
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 59.5 bits (144), Expect = 2e-09
Identities = 42/281 (14%), Positives = 82/281 (29%), Gaps = 37/281 (13%)
Query: 8 TTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMIS--GDISDMQNWEANLEILDLSSNKL 65
L L++S N L + S LDLS N + N L L LS+ K
Sbjct: 100 QDLEYLDVSHNRLQNISCCPMASLRHLDLSFNDFDVLPVCKEFGNL-TKLTFLGLSAAKF 158
Query: 66 -SGSLPNLTSQFDRLSTFNIRNNSVT-GTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFS 123
L + ++ + + G SL + ++ L N L + +
Sbjct: 159 RQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVN 218
Query: 124 S---MALTNLNLSGNGFSG--------------------AIPLRSSHASELLVLPSYPPM 160
+ + L+N+ L+ I + +L P+
Sbjct: 219 ALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPV 278
Query: 161 ESLDLSGNALTGVLPSDIGN-----MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSG 215
E L++ +T + + + L + ++ N + S + LS
Sbjct: 279 EYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSI 338
Query: 216 NQ---FKGEIPDKLSLKLNEFNVSYNDLSGPIPENLRNFPK 253
+ P S N + N + + + +
Sbjct: 339 SDTPFIHMVCPPSPS-SFTFLNFTQNVFTDSVFQGCSTLKR 378
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 2e-09
Identities = 54/238 (22%), Positives = 83/238 (34%), Gaps = 51/238 (21%)
Query: 13 LNLSSNSLS---GTLPTSLKSCVILDLSRNMIS----GDISDMQNWEANLEILDLSSNKL 65
++ S+ +L+ LP K L LS+N IS DIS + L +L LS N++
Sbjct: 36 VDYSNRNLTHVPKDLPPRTK---ALSLSQNSISELRMPDISFLSE----LRVLRLSHNRI 88
Query: 66 SGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM 125
SL F L LDVS N+L+ I +S
Sbjct: 89 R-SLDF--HVFLFN---------------------QDLEYLDVSHNRLQN-ISCCPMAS- 122
Query: 126 ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMG-RL 184
L +L+LS N F +P+ E L + L LS + + ++
Sbjct: 123 -LRHLDLSFNDFD-VLPV----CKEFGNLTK---LTFLGLSAAKFRQLDLLPVAHLHLSC 173
Query: 185 RLLNLANNHLSGKMPSELSKLGALE-YLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLS 241
LL+L + H+ G L +L N + L +S L+
Sbjct: 174 ILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLN 231
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 1e-07
Identities = 37/157 (23%), Positives = 57/157 (36%), Gaps = 16/157 (10%)
Query: 98 EISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSY 157
++ PR L +S N + + L L LS N +RS L
Sbjct: 49 DLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNR------IRSLDFHVFLFNQD- 101
Query: 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHL-SGKMPSELSKLGALEYLDLSGN 216
+E LD+S N L + M LR L+L+ N + E L L +L LS
Sbjct: 102 --LEYLDVSHNRLQN-ISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAA 156
Query: 217 QFKG---EIPDKLSLKLNEFNVSYNDLSGPIPENLRN 250
+F+ L L ++ + G E+L+
Sbjct: 157 KFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQI 193
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 80.9 bits (200), Expect = 8e-17
Identities = 36/217 (16%), Positives = 69/217 (31%), Gaps = 13/217 (5%)
Query: 8 TTLSVLNLSSNSLSGTLP----TSLKSCVILDLSRNMISGDISDMQ--NWEANLEILDLS 61
+L L+LS N LS L L S L+L N + + + L+IL +
Sbjct: 100 GSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVG 157
Query: 62 SNKLSGSLPNLT-SQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
+ + + L I + + P L+ + L + Q + +
Sbjct: 158 NMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHIL-LLEI 216
Query: 121 FFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIG 179
F ++ L L E L ++ ++ +L + +
Sbjct: 217 FVDVTSSVECLELRDTDLDT-FHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLN 274
Query: 180 NMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGN 216
+ L L + N L +L +L+ + L N
Sbjct: 275 QISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 3e-13
Identities = 43/262 (16%), Positives = 81/262 (30%), Gaps = 49/262 (18%)
Query: 7 STTLSVLNLSSNSLSGTLP----TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSS 62
+ + L+LS+N ++ + + L L+ N I+ D + +LE LDLS
Sbjct: 51 TEAVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSY 109
Query: 63 NKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFF 122
N LS +L + F L L L++ N K + F
Sbjct: 110 NYLS-NLSSSW--FKPL---------------------SSLTFLNLLGNPYKTLGETSLF 145
Query: 123 SSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNM 181
S + L L + I + +E L++ + L P + ++
Sbjct: 146 SHLTKLQILRVGNMDTFTKIQRK--------DFAGLTFLEELEIDASDLQSYEPKSLKSI 197
Query: 182 GRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS----------LKLN 231
+ L L + + ++E L+L +LS
Sbjct: 198 QNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFR 257
Query: 232 EFNVSYNDLSGPIPENLRNFPK 253
++ L + + L
Sbjct: 258 NVKITDESLF-QVMKLLNQISG 278
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 35/192 (18%), Positives = 68/192 (35%), Gaps = 33/192 (17%)
Query: 99 ISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYP 158
++ + +LD+S+N++ + + L L L+ NG + + L S
Sbjct: 50 LTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG------INTIEEDSFSSLGS-- 101
Query: 159 PMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSEL-SKLGALEYLDLSGNQ 217
+E LDLS N L+ + S + L LNL N + L S L L+ L +
Sbjct: 102 -LEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMD 160
Query: 218 FKGEIP----DKLSLKLNEFNVSYNDLSGPIPENLRNFPKSSFHP----------GNALL 263
+I L+ L E + + +L+++ S +
Sbjct: 161 TFTKIQRKDFAGLT-FLEELEIDAS--------DLQSYEPKSLKSIQNVSHLILHMKQHI 211
Query: 264 IFPDGVPSSATN 275
+ + ++
Sbjct: 212 LLLEIFVDVTSS 223
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 4e-06
Identities = 27/134 (20%), Positives = 43/134 (32%), Gaps = 22/134 (16%)
Query: 6 NSTTLSVLNLSSN---SLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSS 62
+ +S L L L S L+L +
Sbjct: 196 SIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDT----------------FHF 239
Query: 63 NKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFF 122
++LS N + I + S+ + LL L+ L+ S NQLK +PD F
Sbjct: 240 SELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELEFSRNQLKS-VPDGIF 297
Query: 123 SSM-ALTNLNLSGN 135
+ +L + L N
Sbjct: 298 DRLTSLQKIWLHTN 311
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 1e-16
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 20/218 (9%)
Query: 8 TTLSVLNLSSNSLSGTLP----TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSN 63
+ L+LS N L L S +LDLSR I ++L L L+ N
Sbjct: 28 FSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86
Query: 64 KLSGSLPNLTSQFDRLS---TFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
+ SL F LS ++ + L L+V+ N ++
Sbjct: 87 PIQ-SLALGA--FSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 143
Query: 121 FFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPME-SLDLSGNALTGVLPSDI 178
+FS++ L +L+LS N ++S + ++L VL P + SLDLS N + +
Sbjct: 144 YFSNLTNLEHLDLSSN------KIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGA 196
Query: 179 GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGN 216
RL+ L L N L +L +L+ + L N
Sbjct: 197 FKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 2e-13
Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 45/204 (22%)
Query: 53 ANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ 112
+ + LDLS N L L + F P L LD+S +
Sbjct: 28 FSTKNLDLSFNPLR-HLGS--YSFFSF---------------------PELQVLDLSRCE 63
Query: 113 LKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT 171
++ I D + S+ L+ L L+GN P++S L S ++ L L
Sbjct: 64 IQT-IEDGAYQSLSHLSTLILTGN------PIQSLALGAFSGLSS---LQKLVAVETNLA 113
Query: 172 GVLPSDIGNMGRLRLLNLANNHL-SGKMPSELSKLGALEYLDLSGNQFKGEIPD------ 224
+ IG++ L+ LN+A+N + S K+P S L LE+LDLS N+ + I
Sbjct: 114 SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVL 172
Query: 225 -KLSLKLNEFNVSYNDLSGPIPEN 247
++ L ++S N ++ I
Sbjct: 173 HQMPLLNLSLDLSLNPMNF-IQPG 195
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 2e-16
Identities = 56/282 (19%), Positives = 92/282 (32%), Gaps = 61/282 (21%)
Query: 7 STTLSVLNLSSNSLSGT----LPTSLKSCVILDLSRNMIS----GDISDMQNWEANLEIL 58
S + L++ LS L L+ C ++ L ++ DIS L L
Sbjct: 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 61
Query: 59 DLSSNKLSGS-----LPNLTSQFDRLSTFNIRNNSVTGT----LPSLLEISPRLVTLDVS 109
+L SN+L L L + ++ +++N +TG L S L P L L +S
Sbjct: 62 NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLS 121
Query: 110 SNQLKGPIPDNFFSSMA---------LTNLNLSGNGFS--GAIPLRSSHASELLVLPSYP 158
N L D + L L L S PL S VL + P
Sbjct: 122 DNLLG----DAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLAS-------VLRAKP 170
Query: 159 PMESLDLSGN--------ALTGVLPSDIGNMGRLRLLNLANNHLSGK----MPSELSKLG 206
+ L +S N L L + +L L L + ++ + ++
Sbjct: 171 DFKELTVSNNDINEAGVRVLCQGLKD---SPCQLEALKLESCGVTSDNCRDLCGIVASKA 227
Query: 207 ALEYLDLSGNQFK-------GEIPDKLSLKLNEFNVSYNDLS 241
+L L L N+ S +L + ++
Sbjct: 228 SLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGIT 269
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 1e-13
Identities = 57/280 (20%), Positives = 91/280 (32%), Gaps = 51/280 (18%)
Query: 6 NSTTLSVLNLSSNSLSG----TLPTSLKSC----VILDLSRNMIS----GDISDMQNWEA 53
+ L+ LNL SN L + L++ L L ++ G +S
Sbjct: 54 VNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLP 113
Query: 54 NLEILDLSSNKLSGS-----LPNLTSQFDRLSTFNIRNNSVTGT----LPSLLEISPRLV 104
L+ L LS N L + L RL + S++ L S+L P
Sbjct: 114 TLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFK 173
Query: 105 TLDVSSNQLKGP----IPDNFFSSMA-LTNLNLSGNGFS--GAIPLRSSHASELLVLPSY 157
L VS+N + + S L L L G + L ++ S
Sbjct: 174 ELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCG-------IVASK 226
Query: 158 PPMESLDLSGNALT--GVL---PSDIGNMGRLRLLNLANNHLSGK----MPSELSKLGAL 208
+ L L N L G+ P + RLR L + ++ K + L +L
Sbjct: 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESL 286
Query: 209 EYLDLSGNQFK-------GEIPDKLSLKLNEFNVSYNDLS 241
+ L L+GN+ E + +L V +
Sbjct: 287 KELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFT 326
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 6e-13
Identities = 54/258 (20%), Positives = 82/258 (31%), Gaps = 60/258 (23%)
Query: 6 NSTTLSVLNLSSNS--------LSGTLPTSLKSCVILDLSRNMISGD----ISDMQNWEA 53
L +S+N L L S L L ++ D + + +A
Sbjct: 168 AKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKA 227
Query: 54 NLEILDLSSNKLSGS-----LPNLTSQFDRLSTFNIRNNSVT----GTLPSLLEISPRLV 104
+L L L SNKL P L RL T I +T G L +L L
Sbjct: 228 SLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLK 287
Query: 105 TLDVSSNQLKGPIPDNFFSSM-----ALTNLNLSGNGFS--GAIPLRSSHASELLVLPSY 157
L ++ N+L ++ L +L + F+ S VL
Sbjct: 288 ELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS-------VLAQN 340
Query: 158 PPMESLDLSGNALTGVLPSDIGNMG-------------RLRLLNLANNHLSGK----MPS 200
+ L +S N + + G LR+L LA+ +S + +
Sbjct: 341 RFLLELQISNN--------RLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA 392
Query: 201 ELSKLGALEYLDLSGNQF 218
L +L LDLS N
Sbjct: 393 TLLANHSLRELDLSNNCL 410
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 3e-11
Identities = 54/285 (18%), Positives = 93/285 (32%), Gaps = 61/285 (21%)
Query: 6 NSTTLSVLNLSSNSLSGT----LPTSLKS--CVI--LDLSRNMIS----GDISDMQNWEA 53
TL L+LS N L L L C + L L +S ++ + +
Sbjct: 111 TLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKP 170
Query: 54 NLEILDLSSNKLSGS-----LPNLTSQFDRLSTFNIRNNSVT----GTLPSLLEISPRLV 104
+ + L +S+N ++ + L +L + + VT L ++ L
Sbjct: 171 DFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLR 230
Query: 105 TLDVSSNQL-----KGPIPDNFFSSMALTNLNLSGNGFS--GAIPLRSSHASELLVLPSY 157
L + SN+L P S L L + G + G L L S
Sbjct: 231 ELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDL----CRVLRAKES- 285
Query: 158 PPMESLDLSGNALTGVLPSDIG----------NMGRLRLLNLANNHLSGK----MPSELS 203
++ L L+GN L D G +L L + + + S L+
Sbjct: 286 --LKELSLAGNEL-----GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLA 338
Query: 204 KLGALEYLDLSGNQFKGEIPDKLSL-------KLNEFNVSYNDLS 241
+ L L +S N+ + +L L ++ D+S
Sbjct: 339 QNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 383
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 32/165 (19%), Positives = 58/165 (35%), Gaps = 32/165 (19%)
Query: 99 ISPRLVTLDVSSNQLKGPIPDNFFSSMA-----LTNLNLSGNGFSGAIPLRSSHASEL-L 152
+S + +LD+ +L D ++ + + L G + + ++
Sbjct: 1 MSLDIQSLDIQCEELS----DARWAELLPLLQQCQVVRLDDCGLT------EARCKDISS 50
Query: 153 VLPSYPPMESLDLSGNALTGVLPSDIGNM-----GRLRLLNLANNHLSGK----MPSELS 203
L P + L+L N L V + +++ L+L N L+G + S L
Sbjct: 51 ALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLR 110
Query: 204 KLGALEYLDLSGNQFK-------GEIPDKLSLKLNEFNVSYNDLS 241
L L+ L LS N E +L + + Y LS
Sbjct: 111 TLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLS 155
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 33/164 (20%), Positives = 52/164 (31%), Gaps = 36/164 (21%)
Query: 6 NSTTLSVLNLSSN--------SLSGTLPTSLKSCVILDLSRNMISGD----ISDM--QNW 51
+L L+L+ N L TL L + + S + QN
Sbjct: 282 AKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQN- 340
Query: 52 EANLEILDLSSNK--------LSGSLPNLTSQFDRLSTFNIRNNSVT----GTLPSLLEI 99
L L +S+N+ L L S L + + V+ +L + L
Sbjct: 341 -RFLLELQISNNRLEDAGVRELCQGLGQPGSV---LRVLWLADCDVSDSSCSSLAATLLA 396
Query: 100 SPRLVTLDVSSNQLKGPIPDNFFSSMA-----LTNLNLSGNGFS 138
+ L LD+S+N L S+ L L L +S
Sbjct: 397 NHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 440
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 9e-16
Identities = 31/186 (16%), Positives = 69/186 (37%), Gaps = 20/186 (10%)
Query: 13 LNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS--GSLP 70
L +S + + S + L+ ++ D++ ++ N++ L +++ + +
Sbjct: 28 GLLGQSSTANITEAQMNSLTYITLANINVT-DLTGIEYAH-NIKDLTINNIHATNYNPIS 85
Query: 71 NLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNL 130
L++ L I VT L L LD+S + I + + ++
Sbjct: 86 GLSN----LERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSI 141
Query: 131 NLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLA 190
+LS NG + L LP ++SL++ + + I + +L L
Sbjct: 142 DLSYNG-------AITDIMPLKTLPE---LKSLNIQFDGVHDY--RGIEDFPKLNQLYAF 189
Query: 191 NNHLSG 196
+ + G
Sbjct: 190 SQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 7e-15
Identities = 30/192 (15%), Positives = 68/192 (35%), Gaps = 19/192 (9%)
Query: 26 TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIR 85
++ K+ + L ++ + +I+ + +L + L++ ++ L + + I
Sbjct: 20 STFKAYLNGLLGQSSTA-NIT--EAQMNSLTYITLANINVT-DLTGI-EYAHNIKDLTIN 74
Query: 86 NNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRS 145
N T P + L L + + N +LT L++S +
Sbjct: 75 NIHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSA------HDD 126
Query: 146 SHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKL 205
S +++ LP + S+DLS N + + + L+ LN+ + + +
Sbjct: 127 SILTKINTLPK---VNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVHD--YRGIEDF 180
Query: 206 GALEYLDLSGNQ 217
L L
Sbjct: 181 PKLNQLYAFSQT 192
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 6e-12
Identities = 28/182 (15%), Positives = 70/182 (38%), Gaps = 21/182 (11%)
Query: 74 SQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLS 133
S F + +S + + L + +++ + + + + +L ++
Sbjct: 20 STFKAYLNGLLGQSSTANITEAQMN---SLTYITLANINVTDLTGIEYAHN--IKDLTIN 74
Query: 134 GNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNH 193
+ P+ S L L E L + G +T ++ + L LL+++++
Sbjct: 75 NIHATNYNPI-----SGLSNL------ERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSA 123
Query: 194 LSGKMPSELSKLGALEYLDLSGNQFKGEIP--DKLSLKLNEFNVSYNDLSGPIPENLRNF 251
+ ++++ L + +DLS N +I L +L N+ ++ + + +F
Sbjct: 124 HDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLP-ELKSLNIQFDGVHD--YRGIEDF 180
Query: 252 PK 253
PK
Sbjct: 181 PK 182
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 6e-10
Identities = 23/169 (13%), Positives = 64/169 (37%), Gaps = 19/169 (11%)
Query: 8 TTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
+L+ + L++ +++ + L ++ + + + + +NLE L + ++
Sbjct: 44 NSLTYITLANINVTDLTGIEYAHNIKDLTINNIHAT-NYNPISG-LSNLERLRIMGKDVT 101
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPD-NFFSSM 125
S L+ +I +++ ++ + + P++ ++D+S N I D ++
Sbjct: 102 SDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGA---ITDIMPLKTL 158
Query: 126 -ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGV 173
L +LN+ +G + +L L + G
Sbjct: 159 PELKSLNIQFDGVHDYRGI--EDFPKL---------NQLYAFSQTIGGK 196
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 1e-15
Identities = 53/216 (24%), Positives = 80/216 (37%), Gaps = 23/216 (10%)
Query: 6 NSTTLSVLNLSSNSL----SGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLS 61
+ +N +L LP IL LS N++ L L+L
Sbjct: 8 KVASHLEVNCDKRNLTALPPD-LPKDTT---ILHLSENLLYTFSLATLMPYTRLTQLNLD 63
Query: 62 SNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNF 121
+L+ L + L T ++ +N + +LP L + P L LDVS N+L +P
Sbjct: 64 RAELT-KLQ-VDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTS-LPLGA 119
Query: 122 FSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN 180
+ L L L GN +P +L P +E L L+ N LT + +
Sbjct: 120 LRGLGELQELYLKGNELK-TLPPG--------LLTPTPKLEKLSLANNNLTELPAGLLNG 170
Query: 181 MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGN 216
+ L L L N L +P L + L GN
Sbjct: 171 LENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 4e-11
Identities = 46/194 (23%), Positives = 76/194 (39%), Gaps = 25/194 (12%)
Query: 54 NLEILDLSSNKLSGSLP-NLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ 112
+ ++ L+ +LP +L L ++ N + + L RL L++ +
Sbjct: 11 SHLEVNCDKRNLT-ALPPDLPKDTTIL---HLSENLLYTFSLATLMPYTRLTQLNLDRAE 66
Query: 113 LKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTG 172
L + + L L+LS N ++PL + + P + LD+S N LT
Sbjct: 67 LTK-LQ-VDGTLPVLGTLDLSHNQLQ-SLPL---------LGQTLPALTVLDVSFNRLT- 113
Query: 173 VLPSDI-GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIP----DKLS 227
LP +G L+ L L N L P L+ LE L L+ N E+P + L
Sbjct: 114 SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLE 172
Query: 228 LKLNEFNVSYNDLS 241
L+ + N L
Sbjct: 173 -NLDTLLLQENSLY 185
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 1e-08
Identities = 32/146 (21%), Positives = 52/146 (35%), Gaps = 21/146 (14%)
Query: 100 SPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPP 159
+ ++ L +P + T L+LS N L Y
Sbjct: 9 VASHLEVNCDKRNLTA-LPPDLPKD--TTILHLSENLLYTFSLA---------TLMPYTR 56
Query: 160 MESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFK 219
+ L+L LT + + L L+L++N L +P L AL LD+S N+
Sbjct: 57 LTQLNLDRAELTKLQVDG--TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT 113
Query: 220 GEIP----DKLSLKLNEFNVSYNDLS 241
+P L +L E + N+L
Sbjct: 114 -SLPLGALRGLG-ELQELYLKGNELK 137
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 6/94 (6%)
Query: 161 ESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKG 220
++ LT + P D+ +L+L+ N L + L L L+L +
Sbjct: 13 LEVNCDKRNLTAL-PPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT- 68
Query: 221 EIPDKLSL-KLNEFNVSYNDLSGPIPENLRNFPK 253
++ +L L ++S+N L +P + P
Sbjct: 69 KLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPA 101
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 5e-15
Identities = 39/196 (19%), Positives = 82/196 (41%), Gaps = 34/196 (17%)
Query: 27 SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRN 86
L + V +L + ++ D+ + ++ + ++ + SL + F L ++ +
Sbjct: 17 GLANAVKQNLGKQSVT-DLVSQKELS-GVQNFNGDNSNIQ-SLAGM-QFFTNLKELHLSH 72
Query: 87 NSVTGTLPSLLEISP-----RLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAI 141
N ++ ++SP +L L V+ N+LK N S L+ L L N
Sbjct: 73 NQIS-------DLSPLKDLTKLEELSVNRNRLKNL---NGIPSACLSRLFLDNNELRDTD 122
Query: 142 PLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSE 201
L L + +E L + N L + +G + +L +L+L N ++
Sbjct: 123 SLIH--------LKN---LEILSIRNNKLKSI--VMLGFLSKLEVLDLHGNEITNT--GG 167
Query: 202 LSKLGALEYLDLSGNQ 217
L++L + ++DL+G +
Sbjct: 168 LTRLKKVNWIDLTGQK 183
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 1e-12
Identities = 40/211 (18%), Positives = 77/211 (36%), Gaps = 24/211 (11%)
Query: 8 TTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
NL S++ + L + + I ++ MQ + NL+ L LS N++S
Sbjct: 19 ANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQ-SLAGMQFFT-NLKELHLSHNQIS 76
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA 126
L L +L ++ N + L + S L L + +N+L+ D+
Sbjct: 77 -DLSPL-KDLTKLEELSVNRNRLK-NLNGIP--SACLSRLFLDNNELRDT--DSLIHLKN 129
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRL 186
L L++ N +++L +E LDL GN +T + + ++
Sbjct: 130 LEILSIRNNKLK-----------SIVMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNW 176
Query: 187 LNLANNHLSGKMPSELSKLGALEYL-DLSGN 216
++L + +L + D G
Sbjct: 177 IDLTGQKCVNEPVKYQPELYITNTVKDPDGR 207
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 75.2 bits (185), Expect = 1e-14
Identities = 55/297 (18%), Positives = 100/297 (33%), Gaps = 55/297 (18%)
Query: 8 TTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDIS-DMQNWEANLEILDLSSN 63
++ ++LS NS++ TS L+ L + + I + ++L IL L N
Sbjct: 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89
Query: 64 KLSGSLPNLTSQFDRLS---TFNIRNNSVTGTL--PSLLEISPRLVTLDVSSNQLKGPIP 118
+ L F+ L+ + ++ G + + + L L + N +K P
Sbjct: 90 QFL-QLET--GAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQP 146
Query: 119 DNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSD 177
+FF +M L+L+ N ++S +LL L LS
Sbjct: 147 ASFFLNMRRFHVLDLTFN------KVKSICEEDLLNFQG-KHFTLLRLSSI--------- 190
Query: 178 IGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNE----- 232
L ++ L + K ++ LDLSGN FK + + +
Sbjct: 191 -------TLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQS 243
Query: 233 --FNVSYNDLSGPIPENLRNFPKSSFHP------------GNALLIFPDGVPSSATN 275
+ SYN S N ++ +F + + V S T+
Sbjct: 244 LILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTD 300
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 3e-13
Identities = 49/261 (18%), Positives = 84/261 (32%), Gaps = 42/261 (16%)
Query: 6 NSTTLSVLNLSSN-----------SLSGTLPTSLKSCV--ILDLSRNMISGDISDMQNWE 52
N VL+L+ N + G T L+ + D++ + +
Sbjct: 152 NMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKN 211
Query: 53 ANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ 112
++ LDLS N S+ +F + SL+ + +
Sbjct: 212 TSITTLDLSGNGFKESMA---KRFFDAIAGT--------KIQSLILSNSYNMGSSFGHTN 260
Query: 113 LKGPIPDNFF--SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNAL 170
K P F + + +LS + A+ V + +E L L+ N +
Sbjct: 261 FKDPDNFTFKGLEASGVKTCDLSKSKIF-ALLKS--------VFSHFTDLEQLTLAQNEI 311
Query: 171 TGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIP----DKL 226
+ + + L LNL+ N L L LE LDLS N + + L
Sbjct: 312 NKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIR-ALGDQSFLGL 370
Query: 227 SLKLNEFNVSYNDLSGPIPEN 247
L E + N L +P+
Sbjct: 371 P-NLKELALDTNQLKS-VPDG 389
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 7e-10
Identities = 27/156 (17%), Positives = 52/156 (33%), Gaps = 17/156 (10%)
Query: 93 LPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASEL 151
L + E+ + +D+S N + + + FS + L L + I
Sbjct: 22 LHQVPELPAHVNYVDLSLNSIAE-LNETSFSRLQDLQFLKVEQQTPGLVIRNN------- 73
Query: 152 LVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSE--LSKLGALE 209
+ L L N + + L +L L +L G + S L +LE
Sbjct: 74 -TFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLE 132
Query: 210 YLDLSGNQFK----GEIPDKLSLKLNEFNVSYNDLS 241
L L N K + + + ++++N +
Sbjct: 133 MLVLRDNNIKKIQPASFFLNMR-RFHVLDLTFNKVK 167
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 11/140 (7%)
Query: 3 HGINSTTLSVLNLSSN---SLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILD 59
G+ ++ + +LS + +L ++ + L L++N I+ + +L L+
Sbjct: 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLN 329
Query: 60 LSSNKLSGSLPNLTSQFDRLS---TFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGP 116
LS N L S+ + F+ L ++ N + P L L + +NQLK
Sbjct: 330 LSQNFLG-SIDSRM--FENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKS- 385
Query: 117 IPDNFFSSM-ALTNLNLSGN 135
+PD F + +L + L N
Sbjct: 386 VPDGIFDRLTSLQKIWLHTN 405
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 8e-09
Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 9/102 (8%)
Query: 154 LPSYPP-MESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSEL-SKLGALEYL 211
+P P + +DLS N++ + + + L+ L + + + L +L L
Sbjct: 25 VPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIIL 84
Query: 212 DLSGNQFKGEIP----DKLSLKLNEFNVSYNDL-SGPIPENL 248
L NQF ++ + L+ L ++ +L + N
Sbjct: 85 KLDYNQFL-QLETGAFNGLA-NLEVLTLTQCNLDGAVLSGNF 124
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 72.2 bits (177), Expect = 8e-14
Identities = 37/219 (16%), Positives = 71/219 (32%), Gaps = 23/219 (10%)
Query: 9 TLSVLNLSSNSLSGTLPTSL-KSCVILDLSRNMIS----GDISDMQNWEANLEILDLSSN 63
+ V + ++ +P+ L ++ + L + G S + LE +++S N
Sbjct: 10 SNRVFLCQESKVT-EIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGD----LEKIEISQN 64
Query: 64 KLSGSLPNLT-SQFDRLSTFNIRN-NSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNF 121
+ + S +L I N++ P + P L L +S+ +K +
Sbjct: 65 DVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHK 124
Query: 122 FSSMALTNLNLSGNGFSGAIPLRS--SHASELLVLPSYPPMESLDLSGNALTGVLPSDIG 179
S+ L++ N I S + E L L+ N + + S
Sbjct: 125 IHSLQKVLLDIQDNINIHTIERNSFVGLSFES---------VILWLNKNGIQEIHNSAFN 175
Query: 180 NMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQF 218
L NN+L LD+S +
Sbjct: 176 GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRI 214
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 66.8 bits (163), Expect = 4e-12
Identities = 43/217 (19%), Positives = 84/217 (38%), Gaps = 22/217 (10%)
Query: 8 TTLSVLNLSSNSLSGTLP----TSLKSCVILDLSR-NMISGDISDMQNWEANLEILDLSS 62
L + +S N + + ++L + + + N + + NL+ L +S+
Sbjct: 54 GDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISN 113
Query: 63 NKLSGSLPNLTSQF-DRLSTFNIRNNSVTGTLP--SLLEISPRLVTLDVSSNQLKGPIPD 119
+ LP++ + +I++N T+ S + +S V L ++ N ++ I +
Sbjct: 114 TGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHN 171
Query: 120 NFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIG 179
+ F+ L LNLS N L LD+S + + +
Sbjct: 172 SAFNGTQLDELNLSDN-----NNLEELPNDVFHGASG---PVILDISRTRIHSLPSYGLE 223
Query: 180 NMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGN 216
N+ +LR + N K+P+ L KL AL L+
Sbjct: 224 NLKKLRARSTYNLK---KLPT-LEKLVALMEASLTYP 256
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 71.3 bits (174), Expect = 3e-13
Identities = 40/239 (16%), Positives = 77/239 (32%), Gaps = 20/239 (8%)
Query: 17 SNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQF 76
+ T S L ++ D + L +LS K + L +
Sbjct: 314 PQHTFRVIWTGSDSQKECVLLKDRPECWCRD-SATDEQLFRCELSVEKST-VLQSELESC 371
Query: 77 DRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNG 136
L N T+ L+ L+ + L ++
Sbjct: 372 KELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFST-----------LKAVDPMRAA 420
Query: 137 FSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSG 196
+ + + + +L Y + L L+ LT + + + + L+L++N L
Sbjct: 421 YLDDLRSKFLLENSVL-KMEYADVRVLHLAHKDLTVL--CHLEQLLLVTHLDLSHNRLR- 476
Query: 197 KMPSELSKLGALEYLDLSGNQFKGEIPDKLSL-KLNEFNVSYNDLSG-PIPENLRNFPK 253
+P L+ L LE L S N + + +L +L E + N L + L + P+
Sbjct: 477 ALPPALAALRCLEVLQASDNALE-NVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPR 534
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 64.8 bits (157), Expect = 3e-11
Identities = 44/216 (20%), Positives = 66/216 (30%), Gaps = 20/216 (9%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK- 64
L LS + L + L+SC +L + + L K
Sbjct: 347 TDEQLFRCELSVEKST-VLQSELESCK--ELQELEPENKWCLLTIILLMRALDPLLYEKE 403
Query: 65 LSGSLPNLTS-QFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFS 123
L + R + + + L + L ++ L
Sbjct: 404 TLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTVLCHLEQLL 463
Query: 124 SMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGR 183
+T+L+LS N A+P + L E L S NAL V + N+ R
Sbjct: 464 L--VTHLDLSHNRLR-ALPPALAALRCL---------EVLQASDNALENV--DGVANLPR 509
Query: 184 LRLLNLANNHLSG-KMPSELSKLGALEYLDLSGNQF 218
L+ L L NN L L L L+L GN
Sbjct: 510 LQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 545
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 57.1 bits (137), Expect = 8e-09
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 13/135 (9%)
Query: 37 SRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSL 96
R+ + S ++ A++ +L L+ L+ L +L Q ++ ++ +N + LP
Sbjct: 425 LRSKFLLENSVLKMEYADVRVLHLAHKDLT-VLCHL-EQLLLVTHLDLSHNRLR-ALPPA 481
Query: 97 LEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPS 156
L L L S N L+ D + L L L N R ++ + L S
Sbjct: 482 LAALRCLEVLQASDNALE--NVDGVANLPRLQELLLCNN--------RLQQSAAIQPLVS 531
Query: 157 YPPMESLDLSGNALT 171
P + L+L GN+L
Sbjct: 532 CPRLVLLNLQGNSLC 546
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 3e-13
Identities = 60/237 (25%), Positives = 86/237 (36%), Gaps = 37/237 (15%)
Query: 7 STTLSVLNLSSNSL----SGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSS 62
+ + ++ SS L S +P K LDL N +S S + L +L L+
Sbjct: 15 NNNKNSVDCSSKKLTAIPSN-IPADTKK---LDLQSNKLSSLPSKAFHRLTKLRLLYLND 70
Query: 63 NKLSGSLPNLTSQFDRLS---TFNIRNNSVTGTLPSLLEISP-RLVTLDVSSNQLKGPIP 118
NKL +LP F L T + +N + LP + L L + NQLK +P
Sbjct: 71 NKLQ-TLP--AGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKS-LP 125
Query: 119 DNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLP-----SYPPMESLDLSGNALTG 172
F S+ LT L+L N EL LP ++ L L N L
Sbjct: 126 PRVFDSLTKLTYLSLGYN--------------ELQSLPKGVFDKLTSLKELRLYNNQLKR 171
Query: 173 VLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLK 229
V + L+ L L NN L L L+ L L N + + +
Sbjct: 172 VPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNGIIYMA 228
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 71.0 bits (173), Expect = 5e-13
Identities = 88/512 (17%), Positives = 143/512 (27%), Gaps = 158/512 (30%)
Query: 29 KSCVILDLSRNMISGDISDMQN----W---------EANLEILDLSSNKLSGSL-PNLTS 74
K+ V LD+ + + + W E LE+L KL + PN TS
Sbjct: 163 KTWVALDVCLSY---KVQCKMDFKIFWLNLKNCNSPETVLEML----QKLLYQIDPNWTS 215
Query: 75 QFDRLSTFNIRNNSVTGTLPSLLEISPR---LVTLD-VSSNQLKGPIPDNF-FSS-MALT 128
+ D S +R +S+ L LL+ P L+ L V + + + F S + LT
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAK----AWNAFNLSCKILLT 271
Query: 129 NLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLN 188
++H S + P E L L P D L
Sbjct: 272 TRFKQ--VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL-DCRPQD------LPREV 322
Query: 189 LANNHLSGKMPSELSKLGAL--EYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPE 246
L N P LS + + L + +K DKL+ S N L P
Sbjct: 323 LTTN------PRRLSIIAESIRDGLATW-DNWKHVNCDKLT---TIIESSLNVLE---PA 369
Query: 247 NLRNFPKSSFHPGNALLIFPDGVP---------------------------SSATNSQGQ 279
R F L +FP S Q +
Sbjct: 370 EYRKM----FD---RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK 422
Query: 280 NSARGKHH-----SSKSSIRVAIIVASVGAAVMIVFVLLAYHRAQLKEFHGRTKFSGQTT 334
S K A+ HR+ + ++ F
Sbjct: 423 ESTISIPSIYLELKVKLENEYAL------------------HRSIVDHYNIPKTFDSDDL 464
Query: 335 GRDVKEGRFQRPSLFNF----NSNVQRPPNSSSFSNDHLLTSNSRSLSGQAEFITEIIER 390
+ F ++ N++ P + F L + R F+ + I
Sbjct: 465 IPPYLDQYF-----YSHIGHHLKNIEHPERMTLFRMVFL---DFR-------FLEQKIRH 509
Query: 391 TEGGAPSSASMNPNLLD----------NHPATSGRKSSPGSPLSSSPRFIEVCEQPVRLD 440
+S S+ L N P +++ F+ E+ +
Sbjct: 510 DSTAWNASGSILNTLQQLKFYKPYICDNDPKYERL-------VNAILDFLPKIEENL--- 559
Query: 441 VYSPD----RLAGELFFLDASLAFTAE-ELSR 467
+ S R+A L D ++ A ++ R
Sbjct: 560 ICSKYTDLLRIA--LMAEDEAIFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.7 bits (128), Expect = 1e-07
Identities = 62/331 (18%), Positives = 103/331 (31%), Gaps = 103/331 (31%)
Query: 9 TLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDM----QNW-----EANLEILD 59
S+L + LP + + LS +I+ I D NW + I++
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLS--IIAESIRDGLATWDNWKHVNCDKLTTIIE 360
Query: 60 LSSNKLSGSLPNLTSQ-FDRLSTFNIRNNSV---TGTLPSL-LEISPRLVTLDVSSNQL- 113
S N L P + FDRLS F S T L + ++ V + V N+L
Sbjct: 361 SSLNVLE---PAEYRKMFDRLSVFP---PSAHIPTILLSLIWFDVIKSDVMVVV--NKLH 412
Query: 114 ------KGP------IPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPME 161
K P IP + + + N + H S ++ Y +
Sbjct: 413 KYSLVEKQPKESTISIPSIYLE-LKVKLENE-----------YALHRS---IVDHYNIPK 457
Query: 162 SLDLSGNALTGVLPSD------IGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSG 215
+ D D IG+ HL E L + +LD
Sbjct: 458 TFDSDD---LIPPYLDQYFYSHIGH------------HLKNIEHPERMTLFRMVFLDFR- 501
Query: 216 NQFKGEIPDKLSLKLNEFNVSYNDLSGPIP--ENLRNFPK--SSFHPG-----NALLIFP 266
F L K+ + ++N + + L+ + P NA+L F
Sbjct: 502 --F-------LEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDF- 551
Query: 267 DGVPSSATNSQGQNSARGKHHSSKSSIRVAI 297
+P +N K+ +R+A+
Sbjct: 552 --LPKI-----EENLICSKY---TDLLRIAL 572
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 67.9 bits (166), Expect = 2e-12
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 25/177 (14%)
Query: 53 ANLEILDLSSNKLSGSLPNLT-SQFDRLSTFNIRNNSVT----GTLPSLLEISPRLVTLD 107
+ +LDLS N LS T ++ L + + +N + + P L LD
Sbjct: 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPV----PNLRYLD 94
Query: 108 VSSNQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLS 166
+SSN L + + FS + AL L L N + + + ++ L LS
Sbjct: 95 LSSNHLHT-LDEFLFSDLQALEVLLLYNN------HIVVVDRNAFEDMAQ---LQKLYLS 144
Query: 167 GNALTGVLP---SDIGNMGRLRLLNLANNHLSGKMPSELSKLGAL--EYLDLSGNQF 218
N ++ D + +L LL+L++N L ++L KL A L L N
Sbjct: 145 QNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPL 201
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 2e-12
Identities = 40/168 (23%), Positives = 62/168 (36%), Gaps = 21/168 (12%)
Query: 99 ISPRLVTLDVSSNQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRS-SHASELLVLPS 156
+ LD+S N L + + + L +L LS N + I + L
Sbjct: 37 LPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNL----- 90
Query: 157 YPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGN 216
LDLS N L + ++ L +L L NNH+ + + L+ L LS N
Sbjct: 91 ----RYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQN 146
Query: 217 QFKGEIP-------DKLSLKLNEFNVSYNDLSGPIPENLRNFPKSSFH 257
Q P +KL KL ++S N L +L+ P +
Sbjct: 147 QIS-RFPVELIKDGNKLP-KLMLLDLSSNKLKKLPLTDLQKLPAWVKN 192
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 2e-11
Identities = 49/199 (24%), Positives = 70/199 (35%), Gaps = 46/199 (23%)
Query: 7 STTLSVLNLSSNSLS----GTLPTSLKSCVILDLSRNMIS----GDISDMQNWEANLEIL 58
+ ++L+LS N+LS PT L + L LS N ++ + NL L
Sbjct: 38 PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVP----NLRYL 93
Query: 59 DLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIP 118
DLSSN L +L F L L L + +N + +
Sbjct: 94 DLSSNHLH-TLDEFL--FSDL---------------------QALEVLLLYNNHIVV-VD 128
Query: 119 DNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSD 177
N F M L L LS N + + P + LDLS N L + +D
Sbjct: 129 RNAFEDMAQLQKLYLSQN------QISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTD 182
Query: 178 IGNMGRLRL--LNLANNHL 194
+ + L L NN L
Sbjct: 183 LQKLPAWVKNGLYLHNNPL 201
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 35/168 (20%), Positives = 54/168 (32%), Gaps = 57/168 (33%)
Query: 8 TTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSG 67
L L+LSSN L +L + DL LE+L L +N +
Sbjct: 88 PNLRYLDLSSNHL-----HTLDEFLFSDLQ----------------ALEVLLLYNNHIV- 125
Query: 68 SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM-- 125
+ + F+ + +L L +S NQ+ P
Sbjct: 126 VVDR--NAFEDM---------------------AQLQKLYLSQNQISR-FPVELIKDGNK 161
Query: 126 --ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT 171
L L+LS N L+ ++L LP++ L L N L
Sbjct: 162 LPKLMLLDLSSN------KLKKLPLTDLQKLPAWVK-NGLYLHNNPLE 202
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 4e-12
Identities = 54/288 (18%), Positives = 100/288 (34%), Gaps = 62/288 (21%)
Query: 6 NSTTLSVLNLSSNSLS-----------GTLPTSLKSCVILDLSRNMISGD----ISDM-Q 49
++ L+LS N+L P S+ S L+LS N + + +
Sbjct: 20 IPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTS---LNLSGNSLGFKNSDELVQILA 76
Query: 50 NWEANLEILDLSSNKLSGS-----LPNLTSQFDRLSTFNIRNNSVTGT-----LPSLLEI 99
AN+ L+LS N LS + L + ++ ++ N + + +
Sbjct: 77 AIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNL 136
Query: 100 SPRLVTLDVSSNQLKGPIPDNFFSSM------ALTNLNLSGNGFS--GAIPLRSSHASEL 151
+ +L++ N L G + + + +LNL GN + L A L
Sbjct: 137 PASITSLNLRGNDL-GIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAEL----AKFL 191
Query: 152 LVLPSYPPMESLDLSGNALTGVLPSDIG-----NMGRLRLLNLANNHLSGKMPSELSKLG 206
+P+ + SLDLS N L +++ + LNL N L G L L
Sbjct: 192 ASIPA--SVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLK 249
Query: 207 A----LEYLDLSGNQFKGEIPDKLSL---------KLNEFNVSYNDLS 241
L+ + L + K ++ K+ + + ++
Sbjct: 250 DSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 1e-11
Identities = 50/287 (17%), Positives = 97/287 (33%), Gaps = 63/287 (21%)
Query: 6 NSTTLSVLNLSSNSLS-----------GTLPTSLKSCVILDLSRNMISGD----ISDM-Q 49
+++ LNLS NSL +P ++ S L+LS N +S +
Sbjct: 49 TPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTS---LNLSGNFLSYKSSDELVKTLA 105
Query: 50 NWEANLEILDLSSNKLSGS-----LPNLTSQFDRLSTFNIRNNSVTGT-----LPSLLEI 99
+ +LDL N S ++ +++ N+R N + + L I
Sbjct: 106 AIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAI 165
Query: 100 SPRLVTLDVSSNQLKGPIPDNFFSSMA---------LTNLNLSGN--GFSGAIPLRSSHA 148
+ +L++ N L + +A +T+L+LS N G L
Sbjct: 166 PANVNSLNLRGNNLA----SKNCAELAKFLASIPASVTSLDLSANLLGLKSYAEL----- 216
Query: 149 SELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGR----LRLLNLANNHLSGKMPSELSK 204
+ + + SL+L N L G ++ + L+ + L + + +
Sbjct: 217 AYIFSSIP-NHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKA 275
Query: 205 LGA-------LEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSG 242
LGA + +D +G + +S ++ L
Sbjct: 276 LGAAFPNIQKIILVDKNGKEIHPSHSIPISNLIRELSGKADVPSLLN 322
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 40/172 (23%), Positives = 67/172 (38%), Gaps = 32/172 (18%)
Query: 95 SLLEISPRLVTLDVSSNQLKGPIPDNFFSSM------ALTNLNLSGNGFS--GAIPLRSS 146
I + +LD+S N L I ++T+LNLSGN + L
Sbjct: 16 EFTSIPHGVTSLDLSLNNL-YSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDEL--- 71
Query: 147 HASELLVLPSYPPMESLDLSGNALTGVLPSDIGNM-----GRLRLLNLANNHLSGKMPSE 201
L +P+ + SL+LSGN L+ ++ + +L+L N S K SE
Sbjct: 72 -VQILAAIPAN--VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSE 128
Query: 202 LSKL-----GALEYLDLSGNQFK-------GEIPDKLSLKLNEFNVSYNDLS 241
+ ++ L+L GN +I + +N N+ N+L+
Sbjct: 129 FKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 8e-12
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 460 FTAEELSRA-----PAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV-RHKKEFAKEVK 513
F+ EL A +LGR G +YK L G ++ VK L+ + +F EV+
Sbjct: 20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVE 79
Query: 514 KIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDSLALHLY 555
I H N++ LR + P ERLL+ Y+ S+A L
Sbjct: 80 MISMAVHRNLLRLRGFCMTP--TERLLVYPYMANGSVASCLR 119
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 1e-10
Identities = 35/196 (17%), Positives = 68/196 (34%), Gaps = 28/196 (14%)
Query: 8 TTLSVLNLSSNSLSGTLP----TSLKSCVILDLSRNMISGDISDMQNWEA-----NLEIL 58
+S + +S + L +L +++ I +A L+ L
Sbjct: 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDP----DALKELPLLKFL 110
Query: 59 DLSSNKLSGSLPNLTSQF--DRLSTFNIRNNSVTGTLP--SLLEISPRLVTLDVSSNQLK 114
+ + L P+LT + D I +N ++P + + +TL + +N
Sbjct: 111 GIFNTGLK-MFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169
Query: 115 GPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVL 174
+ F+ L + L+ N + L + S P LD+S ++T L
Sbjct: 170 S-VQGYAFNGTKLDAVYLNKNKY-----LTVIDKDAFGGVYSGP--SLLDVSQTSVT-AL 220
Query: 175 PSDI-GNMGRLRLLNL 189
PS ++ L N
Sbjct: 221 PSKGLEHLKELIARNT 236
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 3e-10
Identities = 38/230 (16%), Positives = 76/230 (33%), Gaps = 27/230 (11%)
Query: 8 TTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMI----SGDISDMQNWEANLEILDLSSN 63
++ + +P+ S L L + S S++ N + + +S +
Sbjct: 11 HQEEDFRVTCKDIQ-RIPSLPPSTQTLKLIETHLRTIPSHAFSNLPN----ISRIYVSID 65
Query: 64 KLSGSLPNLT-SQFDRLSTFNIRNNSVTGTLPS-LLEISPRLVTLDVSSNQLKGPIPDN- 120
L + + +++ IRN + L+ P L L + + LK PD
Sbjct: 66 VTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPDLT 124
Query: 121 -FFSSMALTNLNLSGNGFSGAIPLRS-SHASELLVLPSYPPMESLDLSGNALTGVLPSDI 178
+S+ L ++ N + +IP+ + +L L N T +
Sbjct: 125 KVYSTDIFFILEITDNPYMTSIPVNAFQGLCNET--------LTLKLYNNGFT-SVQGYA 175
Query: 179 GNMGRLRLLNLANNHLSGKMPSE-LSKLG-ALEYLDLSGNQFKGEIPDKL 226
N +L + L N + + + LD+S +P K
Sbjct: 176 FNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSKG 224
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 5e-05
Identities = 16/123 (13%), Positives = 39/123 (31%), Gaps = 15/123 (12%)
Query: 147 HASELLVLPSYPP-MESLDLSGNALTGVLPSDIGNMGRLRLLNLA-NNHLSGKMPSELSK 204
++ +PS PP ++L L L + N+ + + ++ + L
Sbjct: 19 TCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYN 78
Query: 205 LGALEYLDLSGNQFKGEIP----DKLSLKLNEFNVSYNDLSGPIPENLRNFPKSSFHPGN 260
L + ++++ + I +L L + L+ FP +
Sbjct: 79 LSKVTHIEIRNTRNLTYIDPDALKELP-LLKFLGIFNT--------GLKMFPDLTKVYST 129
Query: 261 ALL 263
+
Sbjct: 130 DIF 132
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 2e-10
Identities = 41/269 (15%), Positives = 79/269 (29%), Gaps = 69/269 (25%)
Query: 5 INSTTLSVLNLSSNSLSGT----LPTSLKSCV---ILDLSRNMIS-----------GDIS 46
+ L + LS N+ T L L L L N + +++
Sbjct: 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELA 150
Query: 47 DMQNWEAN--LEILDLSSNK--------LSGSLPNLTSQFDRLSTFNIRNNS-----VTG 91
+ + L + N+ + + + L T + N +
Sbjct: 151 VNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRL----LHTVKMVQNGIRPEGIEH 206
Query: 92 TLPSLLEISPRLVTLDVSSNQL--KG--PIPDNFFSSMALTNLNLSGNGFS--GAIPLRS 145
L L L LD+ N G + S L L L+ S GA +
Sbjct: 207 LLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAV-- 264
Query: 146 SHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKL 205
+ +++L L N +I L + + +
Sbjct: 265 ---VDAFSKLENIGLQTLRLQYN--------EIELDAVRTLKTVIDEKMP---------- 303
Query: 206 GALEYLDLSGNQF--KGEIPDKLSLKLNE 232
L +L+L+GN+F + ++ D++ +
Sbjct: 304 -DLLFLELNGNRFSEEDDVVDEIREVFST 331
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 37/279 (13%), Positives = 79/279 (28%), Gaps = 64/279 (22%)
Query: 6 NSTTLSVLNLSSNSLSGT----LPTSLKSC---VILDLSRNMISGDISDMQNWEANLEIL 58
++ + LS N++ L ++ S I + S G + D +
Sbjct: 30 EDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFT-GRVKDE---------I 79
Query: 59 DLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGT----LPSLLEISPRLVTLDVSSNQL- 113
+ L +L L T + +N+ T L L L L + +N L
Sbjct: 80 PEALRLLLQALLKCPK----LHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG 135
Query: 114 ------------KGPIPDNFFSSMALTNLNLSGNGFS--GAIPLRSSHASELLVLPSYPP 159
+ + ++ L ++ N A
Sbjct: 136 PQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEW----AKTFQSHRL--- 188
Query: 160 MESLDLSGNALT-----GVLPSDIGNMGRLRLLNLANNHLSGK----MPSELSKLGALEY 210
+ ++ + N + +L + L++L+L +N + + L L
Sbjct: 189 LHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRE 248
Query: 211 LDLSGNQFKGE--------IPDKLSLKLNEFNVSYNDLS 241
L L+ ++ L + YN++
Sbjct: 249 LGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE 287
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 4e-10
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 9/128 (7%)
Query: 12 VLNLSSNSLSGTLPTSLKSCV---ILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGS 68
++ L++ + + V LDL I I ++ + +D S N++
Sbjct: 1 MVKLTAELI--EQAAQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-K 56
Query: 69 LPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA-L 127
L RL T + NN + L + P L L +++N L + +S+ L
Sbjct: 57 LDGF-PLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSL 115
Query: 128 TNLNLSGN 135
T L + N
Sbjct: 116 TYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 6e-07
Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 11/112 (9%)
Query: 6 NSTTLSVLNLSSNSLSGT--LPTSLKSCVILDLSRNMISGDISDMQNWEA--NLEILDLS 61
N+ L+L + L +L +D S N +I + + L+ L ++
Sbjct: 17 NAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDN----EIRKLDGFPLLRRLKTLLVN 72
Query: 62 SNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEIS--PRLVTLDVSSN 111
+N++ L L+ + NNS+ L L ++ L L + N
Sbjct: 73 NNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 6e-06
Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 12/91 (13%)
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRL 186
L+L G L ++ +++D S N + + + RL+
Sbjct: 21 DRELDLRGYKIPVIENLGAT----------LDQFDAIDFSDNEIRKL--DGFPLLRRLKT 68
Query: 187 LNLANNHLSGKMPSELSKLGALEYLDLSGNQ 217
L + NN + L L L L+ N
Sbjct: 69 LLVNNNRICRIGEGLDQALPDLTELILTNNS 99
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 1e-05
Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 19/119 (15%)
Query: 102 RLVTLDVSSNQLKGPIPDNFFSSMA-LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPM 160
R LD+ ++ P+ +N +++ ++ S N +L P +
Sbjct: 20 RDRELDLRGYKI--PVIENLGATLDQFDAIDFSDNEIR-----------KLDGFPLLRRL 66
Query: 161 ESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGA---LEYLDLSGN 216
++L ++ N + + + L L L NN L +L L + L YL + N
Sbjct: 67 KTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVE--LGDLDPLASLKSLTYLCILRN 123
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 6e-10
Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 7/118 (5%)
Query: 443 SPDRLAGELFFLDASLAFTAEELSRA-----PAEVLGRSSHGTLYKATLDSGHMLTVKWL 497
D L+ S +L A ++G G +YK L G + +K
Sbjct: 12 INDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRR 71
Query: 498 RVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDSLALHLY 555
+ +EF E++ + RHP++V L + E +L+ Y++ +L HLY
Sbjct: 72 TPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD--ERNEMILIYKYMENGNLKRHLY 127
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 4e-09
Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 34/167 (20%)
Query: 53 ANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ 112
L L++N+ + L T F +L P+L ++ S+N+
Sbjct: 32 QYTAELRLNNNEFT-VLEA-TGIFKKL---------------------PQLRKINFSNNK 68
Query: 113 LKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT 171
+ I + F + + L+ N L + L S +++L L N +T
Sbjct: 69 ITD-IEEGAFEGASGVNEILLTSN------RLENVQHKMFKGLES---LKTLMLRSNRIT 118
Query: 172 GVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQF 218
V + +RLL+L +N ++ P L +L L+L N F
Sbjct: 119 CVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 9e-09
Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 12/123 (9%)
Query: 99 ISPRLVTLDVSSNQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRS-SHASELLVLPS 156
I L +++N+ F + L +N S N + I + AS +
Sbjct: 30 IPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT-DIEEGAFEGASGV----- 83
Query: 157 YPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGN 216
+ L+ N L V + L+ L L +N ++ L ++ L L N
Sbjct: 84 ----NEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDN 139
Query: 217 QFK 219
Q
Sbjct: 140 QIT 142
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 5e-09
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 5/133 (3%)
Query: 4 GINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSN 63
S+ + + L P +++ ++LD ++ G I + NLE L L +
Sbjct: 2 SSGSSGMDMKRRIHLELRNRTPAAVRE-LVLDNCKSND-GKIEGLTAEFVNLEFLSLINV 59
Query: 64 KLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFS 123
L S+ NL + +L + N + G L L E P L L++S N+LK
Sbjct: 60 GLI-SVSNL-PKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLK 117
Query: 124 SM-ALTNLNLSGN 135
+ L +L+L
Sbjct: 118 KLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 2e-07
Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 13/116 (11%)
Query: 103 LVTLDVSSNQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPME 161
+ L + + + + + L L+L G + LP P ++
Sbjct: 26 VRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-----------SVSNLPKLPKLK 74
Query: 162 SLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSG-KMPSELSKLGALEYLDLSGN 216
L+LS N + G L + L LNL+ N L L KL L+ LDL
Sbjct: 75 KLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 3e-07
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 10/94 (10%)
Query: 126 ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLR 185
A+ L L +S+ + + +E L L L V S++ + +L+
Sbjct: 25 AVRELVLDNC--------KSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLK 74
Query: 186 LLNLANNHLSGKMPSELSKLGALEYLDLSGNQFK 219
L L+ N + G + KL L +L+LSGN+ K
Sbjct: 75 KLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLK 108
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 3e-06
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Query: 8 TTLSVLNLSSNSLS--GTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKL 65
L L+L + L LP L L+LS N I G + + NL L+LS NKL
Sbjct: 49 VNLEFLSLINVGLISVSNLP-KLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKL 107
Query: 66 SGSLPNLT--SQFDRLSTFNIRNNSVT---GTLPSLLEISPRLVTLD 107
+ L + + L + ++ N VT S+ ++ P+L LD
Sbjct: 108 K-DISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLD 153
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 7e-09
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 20 LSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRL 79
L P+ +K ++LD SR+ G + + + LE L + L+ S+ NL + ++L
Sbjct: 11 LRNRTPSDVK-ELVLDNSRSNE-GKLEGLTDEFEELEFLSTINVGLT-SIANL-PKLNKL 66
Query: 80 STFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA-LTNLNLSGN 135
+ +N V+G L L E P L L++S N++K + L +L+L
Sbjct: 67 KKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 6e-08
Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 13/116 (11%)
Query: 103 LVTLDVSSNQLK-GPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPME 161
+ L + +++ G + L L+ G + + LP ++
Sbjct: 19 VKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-----------SIANLPKLNKLK 67
Query: 162 SLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSG-KMPSELSKLGALEYLDLSGN 216
L+LS N ++G L L LNL+ N + L KL L+ LDL
Sbjct: 68 KLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 3e-07
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 6/107 (5%)
Query: 8 TTLSVLNLSSNSLSG-TLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
L + N SN L + L ++ I+++ L+ L+LS N++S
Sbjct: 20 KELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-SIANLPKLN-KLKKLELSDNRVS 77
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVT--GTLPSLLEISPRLVTLDVSSN 111
G L L + L+ N+ N + T+ L ++ L +LD+ +
Sbjct: 78 GGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKL-ENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 3e-07
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 126 ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLR 185
+ L L + RS+ + + +E L LT + +++ + +L+
Sbjct: 18 DVKELVLDNS--------RSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLK 67
Query: 186 LLNLANNHLSGKMPSELSKLGALEYLDLSGNQFK 219
L L++N +SG + K L +L+LSGN+ K
Sbjct: 68 KLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIK 101
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 6e-07
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 15/122 (12%)
Query: 53 ANLEILDLSSNKLS-GSLPNLTSQFDRLSTFNIRNNSVT--GTLPSLLEISPRLVTLDVS 109
++++ L L +++ + G L LT +F+ L + N +T LP L +L L++S
Sbjct: 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKL----NKLKKLELS 72
Query: 110 SNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNA 169
N++ G + LT+LNLSGN S + L ++SLDL
Sbjct: 73 DNRVSGGLEVLAEKCPNLTHLNLSGNKI--------KDLSTIEPLKKLENLKSLDLFNCE 124
Query: 170 LT 171
+T
Sbjct: 125 VT 126
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 8e-09
Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 18/112 (16%)
Query: 459 AFTAEELSRA-----------PAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRH--- 504
+F+ EL +G G +YK ++ + VK L +
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEE 72
Query: 505 -KKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDSLALHLY 555
K++F +E+K + +H N+V L + + L+ Y+ SL L
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSS--DGDDLCLVYVYMPNGSLLDRLS 122
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 56.5 bits (135), Expect = 9e-09
Identities = 26/186 (13%), Positives = 63/186 (33%), Gaps = 13/186 (6%)
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM- 125
L + L+ I+ + L + P L +L++ S L + ++ S
Sbjct: 162 VDLSPVLDAMPLLNNLKIKGTN---NLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDL 218
Query: 126 -ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN---M 181
L L L + L +P ++ L + V+ +
Sbjct: 219 PNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDIL 278
Query: 182 GRLRLLNLANNHLSGK----MPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSY 237
+L ++++ L+ + + + K+ L+++++ N E+ +L L +
Sbjct: 279 PQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL-PMKIDV 337
Query: 238 NDLSGP 243
+D
Sbjct: 338 SDSQEY 343
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 50.0 bits (118), Expect = 1e-06
Identities = 41/220 (18%), Positives = 74/220 (33%), Gaps = 48/220 (21%)
Query: 14 NLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK--------- 64
S L L + +L+ + + ++S + NL+ L++ S
Sbjct: 154 QEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLSIGKKPRPNLKSLEIISGGLPDSVVEDI 213
Query: 65 LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEIS--PRLVTLDVSSNQLKGPIPDNFF 122
L LPNL + + + L P L L + + + + + F
Sbjct: 214 LGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFL 273
Query: 123 SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGV----LPSDI 178
S L L E++D+S LT L +
Sbjct: 274 ESDILPQL------------------------------ETMDISAGVLTDEGARLLLDHV 303
Query: 179 GNMGRLRLLNLANNHLSGKMPSELSKLGALEY-LDLSGNQ 217
+ L+ +N+ N+LS +M EL K +L +D+S +Q
Sbjct: 304 DKIKHLKFINMKYNYLSDEMKKELQK--SLPMKIDVSDSQ 341
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 1e-08
Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 35/167 (20%)
Query: 53 ANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ 112
+ + L N + +P F +L +D+S+NQ
Sbjct: 32 ETITEIRLEQNTIK-VIPP--GAFSPYK---------------------KLRRIDLSNNQ 67
Query: 113 LKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT 171
+ + + F + +L +L L GN + +P + ++ L L+ N +
Sbjct: 68 ISE-LAPDAFQGLRSLNSLVLYGNKIT-ELPKS--------LFEGLFSLQLLLLNANKIN 117
Query: 172 GVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQF 218
+ ++ L LL+L +N L S L A++ + L+ N F
Sbjct: 118 CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 2e-08
Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 13/123 (10%)
Query: 99 ISPRLVTLDVSSNQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRS-SHASELLVLPS 156
+ + + + N +K IP FS L ++LS N S + + L
Sbjct: 30 LPETITEIRLEQNTIKV-IPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRSL----- 82
Query: 157 YPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGN 216
SL L GN +T + S + L+LL L N ++ L L L L N
Sbjct: 83 ----NSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDN 138
Query: 217 QFK 219
+ +
Sbjct: 139 KLQ 141
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 7e-06
Identities = 30/137 (21%), Positives = 51/137 (37%), Gaps = 39/137 (28%)
Query: 8 TTLSVLNLSSNSLSGTLPT----SLKSCVILDLSRNMI----SGDISDMQNWEANLEILD 59
L ++LS+N +S L L+S L L N I + +L++L
Sbjct: 56 KKLRRIDLSNNQIS-ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGL----FSLQLLL 110
Query: 60 LSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPD 119
L++NK++ L F L L L + N+L+ I
Sbjct: 111 LNANKIN-CLRVDA--FQDL---------------------HNLNLLSLYDNKLQT-IAK 145
Query: 120 NFFSSM-ALTNLNLSGN 135
FS + A+ ++L+ N
Sbjct: 146 GTFSPLRAIQTMHLAQN 162
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 54.7 bits (131), Expect = 3e-08
Identities = 25/101 (24%), Positives = 36/101 (35%), Gaps = 4/101 (3%)
Query: 143 LRSSHASELLVLPSYPPMESLDLSGN-ALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSE 201
R L LP + L + L + D+ +G LR L + + L P
Sbjct: 16 TRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75
Query: 202 LSKLGALEYLDLSGNQFKGEIPDKL--SLKLNEFNVSYNDL 240
L L+LS N + + K L L E +S N L
Sbjct: 76 FHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 3e-05
Identities = 22/104 (21%), Positives = 33/104 (31%), Gaps = 11/104 (10%)
Query: 92 TLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASE 150
L + L L + + Q + + L NL + + LR
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKS------GLRFVAPDA 75
Query: 151 LLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHL 194
P + L+LS NAL L L+ L L+ N L
Sbjct: 76 FHFTPR---LSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} Length = 372 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 1e-07
Identities = 41/255 (16%), Positives = 83/255 (32%), Gaps = 46/255 (18%)
Query: 6 NSTTLSVLNLSSNSLSG----TLPTSLKSCVILDLSRNMISGD----ISDM-QNWEANLE 56
L +NL+S L TL L L N + + + D+ + + +
Sbjct: 99 GRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQIT 158
Query: 57 ILDLSSNK--------LSGSLPNLTSQFDRLSTFNIRNNSVTGT----LPSLLEISPRLV 104
L LS+N L L TS ++ ++ + + L + L+ + +L
Sbjct: 159 TLRLSNNPLTAAGVAVLMEGLAGNTS----VTHLSLLHTGLGDEGLELLAAQLDRNRQLQ 214
Query: 105 TLDVSSNQLKGP----IPDNFFSSMALTNLNLSGNGFS--GAIPLRSSHASELLVLPSYP 158
L+V+ N + +L L+L N S G L
Sbjct: 215 ELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL----RDLGGAAEGGA 270
Query: 159 PMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQF 218
+ G A++ + +L+ +L+ + + + L DL ++
Sbjct: 271 RVVVSLTEGTAVS-----EYW----SVILSEVQRNLNSWDRARVQRHLELLLRDLEDSRG 321
Query: 219 KGEIPDKLS--LKLN 231
P + + L++
Sbjct: 322 ATLNPWRKAQLLRVE 336
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 49/230 (21%), Positives = 73/230 (31%), Gaps = 61/230 (26%)
Query: 7 STTLSVLNLSSNSLSGTLPT--SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK 64
NL S++ T L S + + + I + N+ L L NK
Sbjct: 18 FAETIKANLKKKSVT-DAVTQNELNSIDQIIANNSDIKSVQG--IQYLPNVRYLALGGNK 74
Query: 65 LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSS 124
L + L+ L L ++ NQL+ +P+ F
Sbjct: 75 LH-DIS----ALKELTN---------------------LTYLILTGNQLQS-LPNGVFDK 107
Query: 125 MA-LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPP--------MESLDLSGNALTGVLP 175
+ L L L N L S P + L+L+ N L LP
Sbjct: 108 LTNLKELVLVENQ-----------------LQSLPDGVFDKLTNLTYLNLAHNQLQ-SLP 149
Query: 176 SDI-GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPD 224
+ + L L+L+ N L KL L+ L L NQ K +PD
Sbjct: 150 KGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS-VPD 198
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 6e-04
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 23/165 (13%)
Query: 81 TFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGA 140
N++ SVT + E++ + + +++ +K + L L GN
Sbjct: 23 KANLKKKSVT-DAVTQNELN-SIDQIIANNSDIKSVQG--IQYLPNVRYLALGGNKLH-- 76
Query: 141 IPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPS 200
++ L + L L+GN L + + L+ L L N L +P
Sbjct: 77 ---------DISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPD 126
Query: 201 EL-SKLGALEYLDLSGNQFKGEIP----DKLSLKLNEFNVSYNDL 240
+ KL L YL+L+ NQ + +P DKL+ L E ++SYN L
Sbjct: 127 GVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLT-NLTELDLSYNQL 169
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 4e-07
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRA 528
L + G L+K G+ + VK L+V R ++F +E ++ HPN++P+
Sbjct: 16 TKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74
Query: 529 YYWGPREQERLLLADYIQGDSL--ALH 553
P L+ ++ SL LH
Sbjct: 75 ACQSPPAPHPTLITHWMPYGSLYNVLH 101
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 7e-07
Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 13/168 (7%)
Query: 53 ANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPR-LVTLDVSSN 111
A+ E LDL S L+ +L+ N+ N + TL + + L TL +++N
Sbjct: 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTELGTLGLANN 93
Query: 112 QLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNAL 170
QL +P F + L L L GN ++P V ++ L L+ N L
Sbjct: 94 QLAS-LPLGVFDHLTQLDKLYLGGNQLK-SLPSG--------VFDRLTKLKELRLNTNQL 143
Query: 171 TGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQF 218
+ + L+ L+L+ N L +LG L+ + L GNQF
Sbjct: 144 QSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 6e-06
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 19/164 (11%)
Query: 34 LDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLS---TFNIRNNSVT 90
LDL ++ L L+L N+L +L FD L+ T + NN +
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLS--AGVFDDLTELGTLGLANNQLA 96
Query: 91 GTLPSLLEISP-RLVTLDVSSNQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHA 148
+LP + +L L + NQLK +P F + L L L+ N +IP
Sbjct: 97 -SLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNTNQLQ-SIPAG---- 149
Query: 149 SELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANN 192
+++L LS N L V +G+L+ + L N
Sbjct: 150 ----AFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 39/154 (25%), Positives = 59/154 (38%), Gaps = 18/154 (11%)
Query: 106 LDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDL 165
LD+ S L F LT LNL N + + + L + +L L
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLS---AGVFDDLT-----ELGTLGL 90
Query: 166 SGNALTGVLPSDI-GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIP- 223
+ N L LP + ++ +L L L N L +L L+ L L+ NQ + IP
Sbjct: 91 ANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPA 148
Query: 224 ---DKLSLKLNEFNVSYNDLSGPIPENLRNFPKS 254
DKL+ L ++S N L +P +
Sbjct: 149 GAFDKLT-NLQTLSLSTNQLQS-VPHGAFDRLGK 180
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 6e-05
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Query: 161 ESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFK- 219
E LDL L + + + +L LNL N L L L L L+ NQ
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS 97
Query: 220 --GEIPDKLSLKLNEFNVSYNDL 240
+ D L+ +L++ + N L
Sbjct: 98 LPLGVFDHLT-QLDKLYLGGNQL 119
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 3e-06
Identities = 32/137 (23%), Positives = 53/137 (38%), Gaps = 31/137 (22%)
Query: 4 GINSTTLSVLNLSSNSLSGTLPT----SLKSCVILDLSRNMISGDISDMQNWEANLEILD 59
I T + L L+ N L L V L+L RN ++G + ++++ L
Sbjct: 26 DIPLHT-TELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQ 84
Query: 60 LSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPD 119
L NK+ + N F L +L TL++ NQ+ +
Sbjct: 85 LGENKIK-EISN--KMFLGLH---------------------QLKTLNLYDNQISC-VMP 119
Query: 120 NFFSSM-ALTNLNLSGN 135
F + +LT+LNL+ N
Sbjct: 120 GSFEHLNSLTSLNLASN 136
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 4e-06
Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 14/108 (12%)
Query: 458 LAFTAEELSRAPA-----EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEV 512
+ A E S E++GR +G +YK +LD + VK +++ F E
Sbjct: 1 MEAAASEPSLDLDNLKLLELIGRGRYGAVYKGSLD-ERPVAVKVFSF---ANRQNFINEK 56
Query: 513 K--KIGSMRHPNIVPLRAY---YWGPREQERLLLADYIQGDSLALHLY 555
++ M H NI E LL+ +Y SL +L
Sbjct: 57 NIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLS 104
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 5e-06
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYY 530
EV R G ++KA L + VK + + + EV + M+H NI+
Sbjct: 30 EVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAE 87
Query: 531 WGPR--EQERLLLADYIQGDSLALHL 554
+ + L+ + + SL+ L
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFL 113
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 7e-06
Identities = 35/140 (25%), Positives = 53/140 (37%), Gaps = 39/140 (27%)
Query: 4 GINSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMIS----GDISDMQNWEANLE 56
GI + L L N + +P + K ++DLS N IS S+M L
Sbjct: 28 GIPRDV-TELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNM----TQLL 81
Query: 57 ILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGP 116
L LS N+L +P T FD L L L + N +
Sbjct: 82 TLILSYNRLR-CIPPRT--FDGLK---------------------SLRLLSLHGNDISV- 116
Query: 117 IPDNFFSSM-ALTNLNLSGN 135
+P+ F+ + AL++L + N
Sbjct: 117 VPEGAFNDLSALSHLAIGAN 136
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 13/98 (13%)
Query: 128 TNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDI-GNMGRLRL 186
T L L GN F+ L +Y + +DLS N ++ L + NM +L
Sbjct: 34 TELYLDGNQFT----------LVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLT 82
Query: 187 LNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPD 224
L L+ N L P L +L L L GN +P+
Sbjct: 83 LILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS-VVPE 119
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 7e-06
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYY 530
EV+GR + G + KA + +K + +K F E++++ + HPNIV L
Sbjct: 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 531 WGPREQERLLLADYIQGDSL--ALH 553
P L+ +Y +G SL LH
Sbjct: 71 LNP----VCLVMEYAEGGSLYNVLH 91
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 9e-06
Identities = 35/172 (20%), Positives = 63/172 (36%), Gaps = 19/172 (11%)
Query: 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRN-NSVT-GTLPSLLEISPRLVTLDVSSN 111
L+ L L +LS + N ++ L N+ + + L +LL RL L++S
Sbjct: 119 KLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWC 178
Query: 112 QLKGPIPDNFFSSMA------LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDL 165
+ +T LNLSG + ++ P + LDL
Sbjct: 179 FD---FTEKHVQVAVAHVSETITQLNLSG------YRKNLQKSDLSTLVRRCPNLVHLDL 229
Query: 166 SG-NALTGVLPSDIGNMGRLRLLNLAN-NHLSGKMPSELSKLGALEYLDLSG 215
S L + + L+ L+L+ + + EL ++ L+ L + G
Sbjct: 230 SDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFG 281
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 37/213 (17%), Positives = 80/213 (37%), Gaps = 20/213 (9%)
Query: 13 LNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS-GSLPN 71
L + T + + R+ + +++ + ++ +DLS++ + +L
Sbjct: 54 LTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSP-FRVQHMDLSNSVIEVSTLHG 112
Query: 72 LTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA----- 126
+ SQ +L ++ ++ + + L + LV L++S + ++
Sbjct: 113 ILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSG---FSEFALQTLLSSCSR 169
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSG--NALTGV-LPSDIGNMGR 183
L LNLS + ++ V + L+LSG L L + +
Sbjct: 170 LDELNLSWC------FDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPN 223
Query: 184 LRLLNLAN-NHLSGKMPSELSKLGALEYLDLSG 215
L L+L++ L E +L L++L LS
Sbjct: 224 LVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSR 256
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 29/157 (18%), Positives = 55/157 (35%), Gaps = 25/157 (15%)
Query: 20 LSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS-----GSLPNLTS 74
+ T + V L I + + + L LS+N + + NL
Sbjct: 17 RKSVVATEAE-KVELHGMIPPIE-KMDATLSTLKACKHLALSTNNIEKISSLSGMENLR- 73
Query: 75 QFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSG 134
++ N + + +L ++ L L +S NQ+ + L L +S
Sbjct: 74 ------ILSLGRNLIK-KIENLDAVADTLEELWISYNQIA--SLSGIEKLVNLRVLYMSN 124
Query: 135 NGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT 171
N + ++ E+ L + +E L L+GN L
Sbjct: 125 N--------KITNWGEIDKLAALDKLEDLLLAGNPLY 153
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 2e-05
Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 24/125 (19%)
Query: 1 SIHGINS-TTLSVLNLSSNSLS-----GTLPTSLKSCVILDLSRNMISGDISDMQNWEAN 54
I ++ L +L+L N + + +L+ L +S N I+ +S ++ N
Sbjct: 62 KISSLSGMENLRILSLGRNLIKKIENLDAVADTLE---ELWISYNQIA-SLSGIEKLV-N 116
Query: 55 LEILDLSSNKLS--GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEIS----------PR 102
L +L +S+NK++ G + L + D+L + N + S P
Sbjct: 117 LRVLYMSNNKITNWGEIDKL-AALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPN 175
Query: 103 LVTLD 107
L LD
Sbjct: 176 LKKLD 180
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 4e-04
Identities = 27/145 (18%), Positives = 48/145 (33%), Gaps = 23/145 (15%)
Query: 73 TSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNL 132
T+ D + F R + V V L ++ + + A +L L
Sbjct: 5 TTIKDAIRIFEERKSVVATEA--------EKVELHGMIPPIEK-MDATLSTLKACKHLAL 55
Query: 133 SGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANN 192
S N ++ L + L L N + + D L L ++ N
Sbjct: 56 STNNIE-----------KISSLSGMENLRILSLGRNLIKKIENLD-AVADTLEELWISYN 103
Query: 193 HLSGKMPSELSKLGALEYLDLSGNQ 217
++ + S + KL L L +S N+
Sbjct: 104 QIA-SL-SGIEKLVNLRVLYMSNNK 126
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 6e-04
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 93 LPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELL 152
+ + L L +S+N ++ I + L L+L N + + +
Sbjct: 40 MDATLSTLKACKHLALSTNNIEK-I-SSLSGMENLRILSLGRNLIK-----KIENLDAVA 92
Query: 153 VLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGA---LE 209
+E L +S N + + S I + LR+L ++NN ++ E+ KL A LE
Sbjct: 93 -----DTLEELWISYNQIASL--SGIEKLVNLRVLYMSNNKITN--WGEIDKLAALDKLE 143
Query: 210 YLDLSGNQF 218
L L+GN
Sbjct: 144 DLLLAGNPL 152
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 4 GINSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDL 60
GI + +L L N ++ P SL + L L N + + + L +LDL
Sbjct: 37 GIPTNA-QILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDL 95
Query: 61 SSNKLSGSLPNLTSQFDRLS---TFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPI 117
+N+L+ LP+ + FDRL + N +T LP +E L L + NQLK I
Sbjct: 96 GTNQLT-VLPS--AVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKS-I 150
Query: 118 PDNFFSSMA-LTNLNLSGN 135
P F ++ LT+ L GN
Sbjct: 151 PHGAFDRLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 36/128 (28%), Positives = 51/128 (39%), Gaps = 29/128 (22%)
Query: 106 LDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPP------ 159
L + NQ+ P F S + L L L N L + P
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQ-----------------LGALPVGVFDSL 87
Query: 160 --MESLDLSGNALTGVLPSDI-GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGN 216
+ LDL N LT VLPS + + L+ L + N L+ ++P + +L L +L L N
Sbjct: 88 TQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQN 145
Query: 217 QFKGEIPD 224
Q K IP
Sbjct: 146 QLKS-IPH 152
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 471 EVLGRSSHGTLYKATLDS-GHMLTVKWLRVG-------LVRHKKEFAKEVKKIGSMRHPN 522
+ +G+ G ++K L ++ +K L +G ++ +EF +EV + ++ HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 523 IVPLRAYYWGP 533
IV L P
Sbjct: 85 IVKLYGLMHNP 95
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPL 526
EVLG+ G K T ++G ++ +K L ++ F KEVK + + HPN++
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKF 72
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVG----LVRHKKEFAKEVKKIGSMRHPNIVPL 526
E++G G +Y+A G + VK R + + + +E K ++HPNI+ L
Sbjct: 13 EIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 527 RA 528
R
Sbjct: 72 RG 73
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A Length = 267 | Back alignment and structure |
|---|
Score = 44.6 bits (105), Expect = 4e-05
Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 9/134 (6%)
Query: 33 ILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTG- 91
LDL D+ L+ S ++ +L + L + N+ NN +
Sbjct: 131 ALDLKGLRSDPDLVAQNIDVV----LNRRSC-MAATLRIIEENIPELLSLNLSNNRLYRL 185
Query: 92 -TLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASE 150
+ S+++ +P L L++S N+LK + + L L L GN +S++ S
Sbjct: 186 DDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245
Query: 151 LLVLPSYPPMESLD 164
+ +P + LD
Sbjct: 246 IRER--FPKLLRLD 257
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A Length = 267 | Back alignment and structure |
|---|
Score = 42.3 bits (99), Expect = 2e-04
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Query: 123 SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGV--LPSDIGN 180
+ ++ N A+ ++ + P + SL+LS N L + + S +
Sbjct: 135 KGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQK 194
Query: 181 MGRLRLLNLANNHLSGKMPSELSKLGA--LEYLDLSGNQFKGEIPDK 225
L++LNL+ N L K EL K+ LE L L GN D+
Sbjct: 195 APNLKILNLSGNEL--KSERELDKIKGLKLEELWLDGNSLCDTFRDQ 239
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAY 529
VLG+ ++G +Y L + + +K + R+ + +E+ ++H NIV Y
Sbjct: 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIV---QY 84
Query: 530 YWGPREQERL-LLADYIQGDSLA 551
E + + + + G SL+
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLS 107
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPL 526
E +G S GT+++A G + VK L EF +EV + +RHPNIV
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 4e-04
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPL 526
+ +G S GT+YK G + VK L V + + F EV + RH NI+
Sbjct: 30 QRIGSGSFGTVYKGKWH-GDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 5e-04
Identities = 43/144 (29%), Positives = 56/144 (38%), Gaps = 46/144 (31%)
Query: 4 GINSTTLSVLNLSSNSLSGTLPT----SLKSCVILDLSRNMISGDISDMQNWEA------ 53
GI S+ + L L SN L +LP L L LS+N I Q+
Sbjct: 25 GIPSSA-TRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQI-------QSLPDGVFDKL 75
Query: 54 -NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ 112
L IL L NKL SLPN FD+L+ +L L + +NQ
Sbjct: 76 TKLTILYLHENKLQ-SLPN--GVFDKLT---------------------QLKELALDTNQ 111
Query: 113 LKGPIPDNFFSSMA-LTNLNLSGN 135
LK +PD F + L + L N
Sbjct: 112 LKS-VPDGIFDRLTSLQKIWLHTN 134
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 7e-04
Identities = 37/128 (28%), Positives = 49/128 (38%), Gaps = 28/128 (21%)
Query: 106 LDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPP------ 159
LD+ +N LK F +LT L L GN L S P
Sbjct: 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNK-----------------LQSLPNGVFNKL 75
Query: 160 --MESLDLSGNALTGVLPSDI-GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGN 216
+ L+LS N L LP+ + + +L+ L L N L KL L+ L L N
Sbjct: 76 TSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQN 134
Query: 217 QFKGEIPD 224
Q K +PD
Sbjct: 135 QLKS-VPD 141
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 26/147 (17%), Positives = 48/147 (32%), Gaps = 30/147 (20%)
Query: 390 RTEGGAPSSASMNPNLLDNHPATSGRKS-----SPGSPLSSSPRFIEVCEQPVRLDVYSP 444
R+ N +L + P S R S P P R + + V Y+
Sbjct: 33 RSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVN-SFYTV 91
Query: 445 DRLAGELFFLDASLAFTAEELSRAPAEVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVR 503
+ E+LG G ++K +G L K ++ ++
Sbjct: 92 SKT-----------------------EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK 128
Query: 504 HKKEFAKEVKKIGSMRHPNIVPLRAYY 530
K+E E+ + + H N++ L +
Sbjct: 129 DKEEVKNEISVMNQLDHANLIQLYDAF 155
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 7e-04
Identities = 36/202 (17%), Positives = 69/202 (34%), Gaps = 23/202 (11%)
Query: 27 SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKL--SGSLPNLTSQFDRLSTFNI 84
LK V+ D +I+ N ++L LSS + + L + + L ++
Sbjct: 111 RLKRMVVTDDCLELIAKSFK-------NFKVLVLSSCEGFSTDGLAAIAATCRNLKELDL 163
Query: 85 RNNSVTGT----LPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA-----LTNLNLSGN 135
R + V L + LV+L++S L + + + L +L L+
Sbjct: 164 RESDVDDVSGHWLSHFPDTYTSLVSLNISC--LASEVSFSALERLVTRCPNLKSLKLNRA 221
Query: 136 GFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLS 195
+ A +L L + + + L + LR L+ + +
Sbjct: 222 VPLEKLATLLQRAPQLEELGTGGYTAEVR---PDVYSGLSVALSGCKELRCLSGFWDAVP 278
Query: 196 GKMPSELSKLGALEYLDLSGNQ 217
+P+ S L L+LS
Sbjct: 279 AYLPAVYSVCSRLTTLNLSYAT 300
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 8e-04
Identities = 21/97 (21%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Query: 462 AEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVK--KIGSMR 519
A +++ E +G+ +G +++ + G + VK R +K + +E + +R
Sbjct: 7 ARDITLL--ECVGKGRYGEVWRGSWQ-GENVAVKIFSS---RDEKSWFRETELYNTVMLR 60
Query: 520 HPNIVPLRAYYWGPREQ--ERLLLADYIQGDSLALHL 554
H NI+ A R + L+ Y + SL +L
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL 97
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 555 | |||
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.98 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.97 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.96 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.96 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.96 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.96 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.96 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.95 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.95 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.95 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.95 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.95 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.95 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.95 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.95 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.95 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.95 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.95 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.95 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.95 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.94 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.94 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.94 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.94 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.94 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.94 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.94 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.94 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.94 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.94 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.94 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.94 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.94 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.93 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.93 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.93 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.93 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.93 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.93 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.93 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.93 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.93 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.93 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.93 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.93 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.93 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.92 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.92 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.92 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.92 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.92 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.92 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.92 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.92 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.92 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.92 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.92 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.92 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.91 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.91 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.91 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.91 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.91 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.9 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.9 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.9 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.9 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.9 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.9 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.9 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.9 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.89 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.89 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.89 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.89 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.88 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.88 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.88 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.88 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.88 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.88 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.87 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.87 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.86 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.85 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.85 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.85 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.85 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.85 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.84 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.84 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.83 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.82 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.82 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.82 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.82 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.82 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.82 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.81 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.81 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.81 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.8 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.8 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.8 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.79 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.79 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.79 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.76 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.75 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.75 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.74 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.74 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.74 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.71 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.71 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.7 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.67 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.66 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 99.66 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 99.66 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.66 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.65 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.65 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.65 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.64 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 99.64 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.64 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.63 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.62 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.59 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.56 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 99.55 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 99.54 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.54 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.53 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.53 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.53 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 99.52 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.5 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.5 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.5 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.49 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 99.49 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.48 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.48 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.46 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.46 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.46 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.45 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 99.44 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 99.43 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 99.43 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.42 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.41 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 99.4 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 99.37 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.35 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 99.35 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.35 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.3 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 99.28 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.26 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.26 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.25 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 99.23 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 99.22 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.22 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.19 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.18 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 99.17 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.17 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.16 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.16 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.16 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.15 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 99.15 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.15 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.14 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.14 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.14 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.14 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.14 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.14 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.13 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.13 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.13 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.13 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.13 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.13 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.13 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.13 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.13 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.12 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.12 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.12 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.11 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.11 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.11 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.11 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.1 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.1 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.1 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.1 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.1 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.1 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.1 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.09 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.09 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.09 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.09 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.09 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.09 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.08 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.08 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.08 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.08 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.08 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.08 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.07 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.07 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.07 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.06 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.06 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.06 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.06 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.06 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.05 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.05 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.05 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.05 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.04 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.04 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.04 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 99.04 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.04 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.04 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.04 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.04 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.04 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.03 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.03 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.03 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.03 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.03 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.02 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.02 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.02 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.02 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.02 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.02 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.02 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.02 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.02 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.02 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.02 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.01 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.01 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.01 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.01 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.01 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.01 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 98.99 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 98.99 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 98.99 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 98.99 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 98.99 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 98.99 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 98.99 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 98.99 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 98.99 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 98.98 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 98.98 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 98.98 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 98.98 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 98.98 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 98.98 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 98.98 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 98.98 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 98.97 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 98.97 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 98.97 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 98.97 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 98.96 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 98.96 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 98.96 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 98.96 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 98.95 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 98.95 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 98.95 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 98.95 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 98.95 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 98.95 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.95 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 98.94 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 98.94 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 98.94 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 98.94 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 98.94 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 98.94 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 98.94 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 98.93 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 98.93 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 98.93 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 98.93 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 98.93 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 98.93 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 98.92 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 98.92 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 98.92 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 98.91 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 98.91 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 98.91 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 98.9 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 98.9 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 98.9 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 98.9 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 98.89 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 98.89 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 98.88 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 98.87 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 98.87 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 98.87 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 98.86 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 98.86 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 98.86 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 98.86 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 98.85 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 98.85 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 98.85 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 98.85 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 98.84 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 98.84 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 98.84 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 98.84 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 98.84 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 98.83 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 98.83 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 98.83 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 98.82 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 98.82 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 98.82 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 98.82 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 98.82 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 98.81 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 98.8 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 98.8 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 98.8 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 98.8 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 98.79 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 98.79 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 98.78 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 98.78 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 98.78 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 98.78 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 98.78 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 98.77 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 98.75 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 98.75 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 98.75 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 98.75 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 98.75 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 98.74 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 98.74 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 98.73 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 98.72 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 98.72 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 98.71 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 98.71 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 98.71 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 98.7 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 98.69 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 98.69 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 98.68 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 98.67 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 98.67 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 98.65 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 98.65 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 98.63 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 98.63 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 98.61 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 98.6 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 98.6 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 98.58 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 98.58 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 98.58 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 98.57 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 98.56 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.55 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 98.52 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.51 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 98.51 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 98.49 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 98.49 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 98.49 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 98.47 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 98.47 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 98.43 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 98.39 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 98.37 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.28 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.28 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 98.28 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 97.99 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 97.88 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.84 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.7 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 97.67 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 97.67 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 97.61 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 97.52 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.17 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.0 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 96.76 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.75 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 96.24 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 93.99 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 93.9 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 90.03 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 89.99 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 87.42 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 85.17 | |
| 2jwa_A | 44 | Receptor tyrosine-protein kinase ERBB-2; transmemb | 84.34 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 83.74 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 80.49 | |
| 2k1k_A | 38 | Ephrin type-A receptor 1; EPHA1, receptor tyrosine | 80.02 |
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-34 Score=319.19 Aligned_cols=266 Identities=36% Similarity=0.518 Sum_probs=229.4
Q ss_pred cCCCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccE
Q 048796 5 INSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLST 81 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 81 (555)
.++++|++|+|++|++++.+|.. +++|++|+|++|.+++..+..+..+++|+.|+|++|.+++.+|..+..+++|++
T Consensus 415 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 494 (768)
T 3rgz_A 415 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNW 494 (768)
T ss_dssp GGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred hcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCE
Confidence 46778888888888888777754 567888888888888888887888888999999999998888888999999999
Q ss_pred EEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcccccccc---------
Q 048796 82 FNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELL--------- 152 (555)
Q Consensus 82 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~--------- 152 (555)
|+|++|++++.+|..+..+++|+.|+|++|++++.+|..+..+++|+.|+|++|.++|.+|..+.......
T Consensus 495 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~ 574 (768)
T 3rgz_A 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKR 574 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCE
T ss_pred EEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccc
Confidence 99999999988999999999999999999999888899999999999999999999988887664421110
Q ss_pred ----------------------------------------------------ccCCCCCcCEEEccCCcCCCcCCccccC
Q 048796 153 ----------------------------------------------------VLPSYPPMESLDLSGNALTGVLPSDIGN 180 (555)
Q Consensus 153 ----------------------------------------------------~l~~~~~L~~L~Ls~N~l~~~~p~~~~~ 180 (555)
.+..+++|+.|+|++|+++|.+|..|+.
T Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~ 654 (768)
T 3rgz_A 575 YVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 654 (768)
T ss_dssp EEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGG
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhc
Confidence 1334578999999999999999999999
Q ss_pred ccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCcc--ccCCCCCCC
Q 048796 181 MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPEN--LRNFPKSSF 256 (555)
Q Consensus 181 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~--l~~~~~~~~ 256 (555)
++.|+.|+|++|.++|.+|..++.+++|+.|||++|+++|.+|..+. .+|+.||+++|+++|.+|.. +..++...|
T Consensus 655 l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~ 734 (768)
T 3rgz_A 655 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKF 734 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGG
T ss_pred cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHh
Confidence 99999999999999999999999999999999999999999999887 78999999999999999975 667776666
Q ss_pred CCCCcccccCCCCCC
Q 048796 257 HPGNALLIFPDGVPS 271 (555)
Q Consensus 257 ~~~n~~~~~~~~~~~ 271 (555)
. ||+.+|+++..+|
T Consensus 735 ~-gN~~Lcg~~l~~C 748 (768)
T 3rgz_A 735 L-NNPGLCGYPLPRC 748 (768)
T ss_dssp C-SCTEEESTTSCCC
T ss_pred c-CCchhcCCCCcCC
Confidence 5 9999998654333
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.98 E-value=2.6e-32 Score=273.18 Aligned_cols=248 Identities=29% Similarity=0.441 Sum_probs=223.0
Q ss_pred CCCCEEECCCCcCCC--CCCCC---CCCCCEEEcCC-CcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccE
Q 048796 8 TTLSVLNLSSNSLSG--TLPTS---LKSCVILDLSR-NMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLST 81 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~--~~~~~---l~~L~~L~L~~-N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 81 (555)
.+++.|+|++|++++ .+|.. +++|++|+|++ |++.+..+..+..+++|++|+|++|.+++.+|..+..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 479999999999998 77754 67899999995 9999888888899999999999999999999999999999999
Q ss_pred EEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCC-CCCeEEccCCcccccCCcCccccccccccCCCCCc
Q 048796 82 FNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPM 160 (555)
Q Consensus 82 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L 160 (555)
|+|++|.+++.+|..+..+++|++|+|++|++++.+|..+..+. +|+.|+|++|.+++.+|..+..+ . |
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l---------~-L 199 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL---------N-L 199 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC---------C-C
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCC---------c-c
Confidence 99999999999999999999999999999999989999999998 99999999999999999887766 5 9
Q ss_pred CEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccC
Q 048796 161 ESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYN 238 (555)
Q Consensus 161 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N 238 (555)
++|+|++|.+++..|..|..+++|+.|+|++|.+++.++. +..+++|++|+|++|.|++.+|..+. ++|+.|++++|
T Consensus 200 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 278 (313)
T 1ogq_A 200 AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278 (313)
T ss_dssp SEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSS
T ss_pred cEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCC
Confidence 9999999999999999999999999999999999976665 88899999999999999999998887 79999999999
Q ss_pred CCCCCcCcc--ccCCCCCCCCCCCcccccCC
Q 048796 239 DLSGPIPEN--LRNFPKSSFHPGNALLIFPD 267 (555)
Q Consensus 239 ~l~~~~p~~--l~~~~~~~~~~~n~~~~~~~ 267 (555)
+++|.+|.. +..+....+ .+|+.+|.++
T Consensus 279 ~l~~~ip~~~~l~~L~~l~l-~~N~~lc~~p 308 (313)
T 1ogq_A 279 NLCGEIPQGGNLQRFDVSAY-ANNKCLCGSP 308 (313)
T ss_dssp EEEEECCCSTTGGGSCGGGT-CSSSEEESTT
T ss_pred cccccCCCCccccccChHHh-cCCCCccCCC
Confidence 999999975 222332333 3788888753
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-30 Score=289.24 Aligned_cols=239 Identities=33% Similarity=0.470 Sum_probs=169.6
Q ss_pred CCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 7 STTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
+++|++|+|++|++++.+|.. +++|++|+|++|++++..+..+..+++|+.|+|++|.+++.+|..+..+++|++|+
T Consensus 393 ~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 472 (768)
T 3rgz_A 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 472 (768)
T ss_dssp TCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred cCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEE
Confidence 445666666666666555543 34566666666666666666666666666666666666666666666666677777
Q ss_pred eeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEE
Q 048796 84 IRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESL 163 (555)
Q Consensus 84 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L 163 (555)
|++|++++.+|..+..+++|+.|+|++|++++.+|..++.+++|+.|+|++|.+++.+|..+..+ ++|+.|
T Consensus 473 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l---------~~L~~L 543 (768)
T 3rgz_A 473 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC---------RSLIWL 543 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGC---------TTCCEE
T ss_pred ecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCC---------CCCCEE
Confidence 77777666666666666777777777777766666666667777777777777766666666555 778888
Q ss_pred EccCCcCCCcCCccc-----------------------------------------------------------------
Q 048796 164 DLSGNALTGVLPSDI----------------------------------------------------------------- 178 (555)
Q Consensus 164 ~Ls~N~l~~~~p~~~----------------------------------------------------------------- 178 (555)
+|++|.+++.+|..+
T Consensus 544 ~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~ 623 (768)
T 3rgz_A 544 DLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGH 623 (768)
T ss_dssp ECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEE
T ss_pred ECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceeccc
Confidence 888888776666433
Q ss_pred -----cCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccCC
Q 048796 179 -----GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNF 251 (555)
Q Consensus 179 -----~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~ 251 (555)
..+++|+.|||++|+++|.+|..++.+++|+.|+|++|+++|.+|..+. .+|+.||+++|+++|.+|..+..+
T Consensus 624 ~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l 703 (768)
T 3rgz_A 624 TSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 703 (768)
T ss_dssp CCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGC
T ss_pred CchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCC
Confidence 2346677888888888888888888888888888888888888888777 678888888888888888877666
Q ss_pred CCC
Q 048796 252 PKS 254 (555)
Q Consensus 252 ~~~ 254 (555)
+..
T Consensus 704 ~~L 706 (768)
T 3rgz_A 704 TML 706 (768)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-30 Score=259.39 Aligned_cols=228 Identities=29% Similarity=0.400 Sum_probs=209.4
Q ss_pred CcCCCCCCEEECCC-CcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCc
Q 048796 4 GINSTTLSVLNLSS-NSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRL 79 (555)
Q Consensus 4 ~~n~~~L~~L~Ls~-N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L 79 (555)
..++++|++|+|++ |++++.+|.. +++|++|+|++|++++..+..+..+++|++|+|++|.+++.+|..+..+++|
T Consensus 72 l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 151 (313)
T 1ogq_A 72 LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNL 151 (313)
T ss_dssp GGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTC
T ss_pred HhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCC
Confidence 35688999999995 9999888864 6789999999999998888888889999999999999999999999999999
Q ss_pred cEEEeeCCcCCCCCchhccCCC-CccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCC
Q 048796 80 STFNIRNNSVTGTLPSLLEISP-RLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYP 158 (555)
Q Consensus 80 ~~L~L~~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~ 158 (555)
++|+|++|.+++.+|..+..++ +|+.|+|++|++++.+|..+..+. |+.|+|++|.+++..|..+..+ +
T Consensus 152 ~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l---------~ 221 (313)
T 1ogq_A 152 VGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSD---------K 221 (313)
T ss_dssp CEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTT---------S
T ss_pred CeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcC---------C
Confidence 9999999999999999999998 999999999999989999999987 9999999999998888777766 9
Q ss_pred CcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEecc
Q 048796 159 PMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSY 237 (555)
Q Consensus 159 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~ 237 (555)
+|+.|+|++|.+++.+|. +..+++|++|+|++|.|++.+|..+..+++|+.|+|++|++++.+|.... ++|+.+++++
T Consensus 222 ~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~ 300 (313)
T 1ogq_A 222 NTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYAN 300 (313)
T ss_dssp CCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCS
T ss_pred CCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcC
Confidence 999999999999977665 88899999999999999999999999999999999999999999988643 7899999999
Q ss_pred CC-CCC
Q 048796 238 ND-LSG 242 (555)
Q Consensus 238 N~-l~~ 242 (555)
|+ ++|
T Consensus 301 N~~lc~ 306 (313)
T 1ogq_A 301 NKCLCG 306 (313)
T ss_dssp SSEEES
T ss_pred CCCccC
Confidence 98 555
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-28 Score=239.42 Aligned_cols=226 Identities=21% Similarity=0.163 Sum_probs=203.7
Q ss_pred CCEEECCCCcCCCCCCC-CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCc
Q 048796 10 LSVLNLSSNSLSGTLPT-SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS 88 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 88 (555)
-++++++++.++. +|. ..++|++|+|++|+|+++.+..+..+++|++|+|++|.+++..+..|..+++|++|+|++|.
T Consensus 13 ~~~~~c~~~~l~~-ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 91 (285)
T 1ozn_A 13 KVTTSCPQQGLQA-VPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (285)
T ss_dssp SCEEECCSSCCSS-CCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred CeEEEcCcCCccc-CCcCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCC
Confidence 3689999999985 454 45689999999999999888888889999999999999998889999999999999999997
Q ss_pred -CCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccC
Q 048796 89 -VTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSG 167 (555)
Q Consensus 89 -l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~ 167 (555)
++...+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|.+++..+..+..+ ++|++|+|++
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---------~~L~~L~l~~ 162 (285)
T 1ozn_A 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDL---------GNLTHLFLHG 162 (285)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---------TTCCEEECCS
T ss_pred CccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccC---------CCccEEECCC
Confidence 887778899999999999999999998888889999999999999999997766656655 8999999999
Q ss_pred CcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcC
Q 048796 168 NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 168 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p 245 (555)
|.+++..+..|..+++|+.|+|++|.+++..|..+..+++|+.|++++|.+++..+..+. ++|+.|++++|++.|.++
T Consensus 163 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 163 NRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred CcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 999988777899999999999999999998899999999999999999999976666565 789999999999998765
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-28 Score=255.44 Aligned_cols=247 Identities=19% Similarity=0.189 Sum_probs=192.0
Q ss_pred CCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCC-CcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 8 TTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGD-ISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~-~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
++|++|+|++|.|++..|.. +++|++|+|++|.+.+. .+..+..+++|++|+|++|.+++..|..|.++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 56888888888888765643 56778888888888643 356677778888888888888877788888888888888
Q ss_pred eeCCcCCCCCchh--ccCCCCccEEEcCCCcCCCCCchh-hhCCCCCCeEEccCCcccccCCcCcccc------------
Q 048796 84 IRNNSVTGTLPSL--LEISPRLVTLDVSSNQLKGPIPDN-FFSSMALTNLNLSGNGFSGAIPLRSSHA------------ 148 (555)
Q Consensus 84 L~~N~l~~~~~~~--l~~l~~L~~L~L~~N~l~~~~~~~-~~~~~~L~~L~Ls~N~l~~~~p~~~~~~------------ 148 (555)
|++|.+++..+.. +..+++|++|+|++|++++..|.. +..+++|+.|++++|.+.+..+..+..+
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 8888887654443 778888888888888888766665 6778888888888888877666555432
Q ss_pred ----------------------ccccccC---------------------------------------------------
Q 048796 149 ----------------------SELLVLP--------------------------------------------------- 155 (555)
Q Consensus 149 ----------------------~~l~~l~--------------------------------------------------- 155 (555)
..+..+.
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 0010000
Q ss_pred ---CCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCC
Q 048796 156 ---SYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKL 230 (555)
Q Consensus 156 ---~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L 230 (555)
..++|+.|++++|.+++..|..|..+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..|..+. ++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 125789999999999988888899999999999999999988888888999999999999999877777665 789
Q ss_pred CEEEeccCCCCCCcCccccCCCCC
Q 048796 231 NEFNVSYNDLSGPIPENLRNFPKS 254 (555)
Q Consensus 231 ~~L~ls~N~l~~~~p~~l~~~~~~ 254 (555)
+.|++++|.+++..|..+..++..
T Consensus 350 ~~L~Ls~N~l~~~~~~~~~~l~~L 373 (455)
T 3v47_A 350 EVLDLSYNHIRALGDQSFLGLPNL 373 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTC
T ss_pred CEEECCCCcccccChhhccccccc
Confidence 999999999988888777666554
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-28 Score=255.45 Aligned_cols=251 Identities=21% Similarity=0.231 Sum_probs=169.5
Q ss_pred cCCCCCCEEECCCCcCCCCCC----CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCcc--ccCCCC
Q 048796 5 INSTTLSVLNLSSNSLSGTLP----TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNL--TSQFDR 78 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~----~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~--~~~l~~ 78 (555)
.++++|++|+|++|.+.+.++ ..+++|++|+|++|++++..+..+..+++|++|+|++|.+++..+.. +..+++
T Consensus 51 ~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~ 130 (455)
T 3v47_A 51 SRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTS 130 (455)
T ss_dssp SSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTT
T ss_pred ccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCccc
Confidence 345666666666666654332 23455666666666666555555555566666666666665433322 555666
Q ss_pred ccEEEeeCCcCCCCCchh-ccCCCCccEEEcCCCcCCCCCchhhhC----------------------------------
Q 048796 79 LSTFNIRNNSVTGTLPSL-LEISPRLVTLDVSSNQLKGPIPDNFFS---------------------------------- 123 (555)
Q Consensus 79 L~~L~L~~N~l~~~~~~~-l~~l~~L~~L~L~~N~l~~~~~~~~~~---------------------------------- 123 (555)
|++|+|++|.+++..|.. +..+++|++|+|++|++++..+..+..
T Consensus 131 L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~ 210 (455)
T 3v47_A 131 LEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFK 210 (455)
T ss_dssp CCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTT
T ss_pred CCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccc
Confidence 666666666666554443 555566666666666555443332221
Q ss_pred ---------------------------------------------------------------CCCCCeEEccCCccccc
Q 048796 124 ---------------------------------------------------------------SMALTNLNLSGNGFSGA 140 (555)
Q Consensus 124 ---------------------------------------------------------------~~~L~~L~Ls~N~l~~~ 140 (555)
..+|+.|++++|.+.+.
T Consensus 211 ~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 290 (455)
T 3v47_A 211 NTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFAL 290 (455)
T ss_dssp TCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEE
T ss_pred cceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCcccccc
Confidence 13567777777777766
Q ss_pred CCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCC
Q 048796 141 IPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKG 220 (555)
Q Consensus 141 ~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 220 (555)
.|..+..+ ++|++|+|++|.+++..|..|..+++|+.|+|++|.+++..+..+..+++|++|+|++|++++
T Consensus 291 ~~~~~~~l---------~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 361 (455)
T 3v47_A 291 LKSVFSHF---------TDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA 361 (455)
T ss_dssp CTTTTTTC---------TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCE
T ss_pred chhhcccC---------CCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccc
Confidence 77666665 889999999999998888889999999999999999988888889999999999999999998
Q ss_pred CCChhhh--cCCCEEEeccCCCCCCcCccccCCCCCC--CCCCCcccc
Q 048796 221 EIPDKLS--LKLNEFNVSYNDLSGPIPENLRNFPKSS--FHPGNALLI 264 (555)
Q Consensus 221 ~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~~~~~--~~~~n~~~~ 264 (555)
..|..+. ++|+.|++++|++++..+..+..++... ...+|+..|
T Consensus 362 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 409 (455)
T 3v47_A 362 LGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 409 (455)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCccc
Confidence 8787776 7899999999999876665555555432 122555544
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-28 Score=256.75 Aligned_cols=245 Identities=22% Similarity=0.157 Sum_probs=152.6
Q ss_pred cCCCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccE
Q 048796 5 INSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLST 81 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 81 (555)
.++++|++|+|++|.+++..|.. +++|++|+|++|+|+.++...+..+++|++|+|++|.+++..+..|..+++|++
T Consensus 53 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 132 (477)
T 2id5_A 53 ASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKS 132 (477)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCE
Confidence 34566677777777666555543 345667777777776666666666666777777777776666666677777777
Q ss_pred EEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccC------
Q 048796 82 FNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLP------ 155 (555)
Q Consensus 82 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~------ 155 (555)
|+|++|.+.+..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+.+..+..+..+..+..+.
T Consensus 133 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~ 212 (477)
T 2id5_A 133 LEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY 212 (477)
T ss_dssp EEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTT
T ss_pred EECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcc
Confidence 77777777666666677777777777777777655555666777777777777777666555555443222111
Q ss_pred ---------CCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhh
Q 048796 156 ---------SYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKL 226 (555)
Q Consensus 156 ---------~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 226 (555)
...+|++|+|++|.+++..+..|..+++|+.|+|++|.|++..+..|..+++|+.|+|++|++++..|..+
T Consensus 213 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 292 (477)
T 2id5_A 213 LDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAF 292 (477)
T ss_dssp CCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTB
T ss_pred ccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHh
Confidence 11255666666666664444455666666666666666665555556666666666666666665555554
Q ss_pred h--cCCCEEEeccCCCCCCcCcccc
Q 048796 227 S--LKLNEFNVSYNDLSGPIPENLR 249 (555)
Q Consensus 227 ~--~~L~~L~ls~N~l~~~~p~~l~ 249 (555)
. ++|+.|++++|.+++..+..+.
T Consensus 293 ~~l~~L~~L~L~~N~l~~~~~~~~~ 317 (477)
T 2id5_A 293 RGLNYLRVLNVSGNQLTTLEESVFH 317 (477)
T ss_dssp TTCTTCCEEECCSSCCSCCCGGGBS
T ss_pred cCcccCCEEECCCCcCceeCHhHcC
Confidence 4 5666666666666654444443
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-28 Score=238.14 Aligned_cols=235 Identities=26% Similarity=0.269 Sum_probs=207.5
Q ss_pred CCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCc-CCCCCCccccCCCCccEE
Q 048796 7 STTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK-LSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L 82 (555)
.++|++|+|++|++++..+. .+++|++|+|++|.++++.+..+..+++|++|+|++|. ++...+..+..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 46899999999999976654 45789999999999998888888899999999999998 887778899999999999
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCE
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMES 162 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~ 162 (555)
+|++|.+++..+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|.+++..+..+..+ ++|++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---------~~L~~ 181 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGL---------HSLDR 181 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTC---------TTCCE
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCc---------cccCE
Confidence 999999998888999999999999999999997777778999999999999999997666666655 89999
Q ss_pred EEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEeccCCCC
Q 048796 163 LDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSYNDLS 241 (555)
Q Consensus 163 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~N~l~ 241 (555)
|+|++|.+++..|..|..+++|+.|+|++|.+++..+..+..+++|+.|++++|.+....+.... ..++.+..+.|.+.
T Consensus 182 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~ 261 (285)
T 1ozn_A 182 LLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVP 261 (285)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCB
T ss_pred EECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccc
Confidence 99999999999999999999999999999999988878899999999999999999976554322 44556667889999
Q ss_pred CCcCccccC
Q 048796 242 GPIPENLRN 250 (555)
Q Consensus 242 ~~~p~~l~~ 250 (555)
|..|..+.+
T Consensus 262 c~~p~~l~g 270 (285)
T 1ozn_A 262 CSLPQRLAG 270 (285)
T ss_dssp EEESGGGTT
T ss_pred cCCchHhCC
Confidence 999887654
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-27 Score=248.88 Aligned_cols=231 Identities=19% Similarity=0.184 Sum_probs=135.1
Q ss_pred CCEEECCCCcCCCCCCCCC-CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCc
Q 048796 10 LSVLNLSSNSLSGTLPTSL-KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS 88 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 88 (555)
...++.+++.++ .+|..+ +++++|+|++|+|+++.+..|..+++|++|+|++|.|++..+..|.++++|++|+|++|+
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CcEEEECCCCcC-ccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 355666666665 344333 356666666666666655666666666666666666665555666666666666666666
Q ss_pred CCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCC-cCccccccccccCCCCCcCEEEccC
Q 048796 89 VTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIP-LRSSHASELLVLPSYPPMESLDLSG 167 (555)
Q Consensus 89 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~~~~l~~l~~~~~L~~L~Ls~ 167 (555)
|+...+..|..+++|++|+|++|+++...+..|..+++|+.|+|++|...+.++ ..+..+ ++|++|+|++
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l---------~~L~~L~L~~ 205 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGL---------FNLKYLNLGM 205 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTC---------TTCCEEECTT
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCC---------CCCCEEECCC
Confidence 665555556666666666666666664444456666666666666633222222 223333 5666666666
Q ss_pred CcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcC
Q 048796 168 NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 168 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p 245 (555)
|.+++. | .+..+++|+.|+|++|.|++..|..|.++++|+.|+|++|++++..+..+. ++|+.|++++|+|++..+
T Consensus 206 n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 283 (452)
T 3zyi_A 206 CNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPH 283 (452)
T ss_dssp SCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred Cccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccCh
Confidence 666643 2 355566666666666666665566666666666666666666655555444 556666666666665444
Q ss_pred ccccCCC
Q 048796 246 ENLRNFP 252 (555)
Q Consensus 246 ~~l~~~~ 252 (555)
..+..++
T Consensus 284 ~~~~~l~ 290 (452)
T 3zyi_A 284 DLFTPLR 290 (452)
T ss_dssp TSSTTCT
T ss_pred HHhcccc
Confidence 4444333
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=238.56 Aligned_cols=230 Identities=23% Similarity=0.254 Sum_probs=139.1
Q ss_pred CEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCC--CCccccCCCCccEEEeeCC
Q 048796 11 SVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGS--LPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 11 ~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~L~~N 87 (555)
+.++++++.++ .+|.. .++|++|+|++|+++.++...+..+++|++|+|++|.++.. .+..+..+++|++|+|++|
T Consensus 10 ~~l~c~~~~l~-~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n 88 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFN 88 (306)
T ss_dssp TEEECCSSCCS-SCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSC
T ss_pred CEEEcCCCCcc-cCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCC
Confidence 45666666665 33333 34666666666666655555566666666666666666522 2444555666666666666
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCc-hhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEcc
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIP-DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLS 166 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls 166 (555)
.+. .++..+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+.+..+..+..+ ++|++|+|+
T Consensus 89 ~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---------~~L~~L~l~ 158 (306)
T 2z66_A 89 GVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL---------SSLEVLKMA 158 (306)
T ss_dssp SEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTC---------TTCCEEECT
T ss_pred ccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccC---------cCCCEEECC
Confidence 666 344456666666666666666654333 355666666666666666665555544444 666666666
Q ss_pred CCcCCC-cCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCC
Q 048796 167 GNALTG-VLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGP 243 (555)
Q Consensus 167 ~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~ 243 (555)
+|.+++ ..|..+..+++|+.|+|++|.+++..|..+..+++|+.|++++|.+++..+..+. ++|+.|++++|++++.
T Consensus 159 ~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 238 (306)
T 2z66_A 159 GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 238 (306)
T ss_dssp TCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBC
T ss_pred CCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCccc
Confidence 666665 4555666666666666666666665566666666666666666666655444443 5666666666666666
Q ss_pred cCccccCC
Q 048796 244 IPENLRNF 251 (555)
Q Consensus 244 ~p~~l~~~ 251 (555)
.|..+..+
T Consensus 239 ~~~~~~~~ 246 (306)
T 2z66_A 239 KKQELQHF 246 (306)
T ss_dssp SSSSCCCC
T ss_pred CHHHHHhh
Confidence 66555444
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-27 Score=238.01 Aligned_cols=221 Identities=23% Similarity=0.294 Sum_probs=154.5
Q ss_pred CCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 7 STTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
..+++.|+|++|+|+ .+|.. +++|++|+|++|.|+ ..+..+..+++|++|+|++|.++ .+|..+..+++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 356777777777776 44543 556777777777777 44455566667777777777777 6677777777777777
Q ss_pred eeCCcCCCCCchhccC---------CCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcccccccccc
Q 048796 84 IRNNSVTGTLPSLLEI---------SPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVL 154 (555)
Q Consensus 84 L~~N~l~~~~~~~l~~---------l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l 154 (555)
|++|++.+.+|..+.. +++|++|+|++|+++ .+|..+..+++|+.|+|++|.+++ +|..+..+
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l------ 228 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHL------ 228 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGC------
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccC------
Confidence 7777766666665543 777777777777776 666677777777777777777764 34344444
Q ss_pred CCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCE
Q 048796 155 PSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNE 232 (555)
Q Consensus 155 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~ 232 (555)
++|++|+|++|.+.+.+|..|..+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|.+.+.+|..+. ++++.
T Consensus 229 ---~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~ 305 (328)
T 4fcg_A 229 ---PKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCI 305 (328)
T ss_dssp ---TTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCE
T ss_pred ---CCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceE
Confidence 6777777777777777777777777777777777777777777777777777777777777777777666 66777
Q ss_pred EEeccCCCC
Q 048796 233 FNVSYNDLS 241 (555)
Q Consensus 233 L~ls~N~l~ 241 (555)
+++..|.+.
T Consensus 306 l~l~~~~~~ 314 (328)
T 4fcg_A 306 ILVPPHLQA 314 (328)
T ss_dssp EECCGGGSC
T ss_pred EeCCHHHHH
Confidence 777665554
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=271.13 Aligned_cols=250 Identities=22% Similarity=0.242 Sum_probs=190.6
Q ss_pred CCCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 6 NSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
.+++|+.|+|++|.+++..+. .+++|+.|+|++|+|++..+..+..+++|++|+|++|.+++..+..|..+++|++|
T Consensus 264 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 343 (844)
T 3j0a_A 264 ARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYI 343 (844)
T ss_dssp TTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEE
T ss_pred ccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEE
Confidence 357899999999999876664 45688899999999998888888888899999999999988888899999999999
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCc----------------------------------------hhhh
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIP----------------------------------------DNFF 122 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~----------------------------------------~~~~ 122 (555)
+|++|.+....+..|..+++|+.|+|++|.+++... ..+.
T Consensus 344 ~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~ 423 (844)
T 3j0a_A 344 DLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLL 423 (844)
T ss_dssp ECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHT
T ss_pred ECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhh
Confidence 999999988888888889999999999998874211 0112
Q ss_pred CCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCC-----CcCCccccCccccceeecccccccCC
Q 048796 123 SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT-----GVLPSDIGNMGRLRLLNLANNHLSGK 197 (555)
Q Consensus 123 ~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~ 197 (555)
.+++|+.|+|++|.+++..+... +..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|.|++.
T Consensus 424 ~l~~L~~L~Ls~N~l~~~~~~~~--------~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 495 (844)
T 3j0a_A 424 RVPHLQILILNQNRFSSCSGDQT--------PSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSL 495 (844)
T ss_dssp TCTTCCEEEEESCCCCCCCSSSS--------SCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTC
T ss_pred cCCccceeeCCCCcccccccccc--------cccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCccccc
Confidence 34444444444444443222110 112366677777777765 33445688889999999999999998
Q ss_pred CchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCCCcCccccCCCCCCCCCCCcccc
Q 048796 198 MPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPENLRNFPKSSFHPGNALLI 264 (555)
Q Consensus 198 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~~~p~~l~~~~~~~~~~~n~~~~ 264 (555)
.|..|.++++|+.|+|++|+|++..+..+.++|+.|++++|++++..|..+..+....+. +|+..|
T Consensus 496 ~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~-~Np~~C 561 (844)
T 3j0a_A 496 PPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDIT-HNKFIC 561 (844)
T ss_dssp CTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEE-EECCCC
T ss_pred ChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEec-CCCccc
Confidence 888899999999999999999987777666899999999999999998877654433332 566555
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.7e-27 Score=245.86 Aligned_cols=224 Identities=24% Similarity=0.251 Sum_probs=101.8
Q ss_pred CCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEee
Q 048796 9 TLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIR 85 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 85 (555)
+|+.|+|++|+|++..+.. +++|++|+|++|+|+.+.+..|..+++|++|+|++|.|+...+..|..+++|++|+|+
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 144 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR 144 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC
T ss_pred CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC
Confidence 3444444444444333222 2344444444444444444444444444444444444443333344444444444444
Q ss_pred CCcCCCCCchhccCCCCccEEEcCCCc-CCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEE
Q 048796 86 NNSVTGTLPSLLEISPRLVTLDVSSNQ-LKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164 (555)
Q Consensus 86 ~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~ 164 (555)
+|.|+...+..|..+++|+.|+|++|+ +....+..|..+++|+.|+|++|.++. +|. + ..+++|+.|+
T Consensus 145 ~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~-~---------~~l~~L~~L~ 213 (440)
T 3zyj_A 145 NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPN-L---------TPLIKLDELD 213 (440)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCC-C---------TTCSSCCEEE
T ss_pred CCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-ccc-c---------CCCcccCEEE
Confidence 444444444444444444444444422 221222234444444555554444442 121 1 1224455555
Q ss_pred ccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCC
Q 048796 165 LSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSG 242 (555)
Q Consensus 165 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~ 242 (555)
|++|.|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+. ++|+.|++++|++.|
T Consensus 214 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 214 LSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 555555544444555555555555555555544444455555555555555555533333332 445555555555544
Q ss_pred C
Q 048796 243 P 243 (555)
Q Consensus 243 ~ 243 (555)
.
T Consensus 294 d 294 (440)
T 3zyj_A 294 N 294 (440)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.6e-27 Score=241.39 Aligned_cols=235 Identities=20% Similarity=0.193 Sum_probs=148.6
Q ss_pred cCCCCCCEEECCCCcCCCCCC---CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccE
Q 048796 5 INSTTLSVLNLSSNSLSGTLP---TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLST 81 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 81 (555)
..+++|+.|++++|.++...+ ..+++|++|+|++|.++++.+..+..+++|++|+|++|.+++..+..|..+++|++
T Consensus 42 ~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 42 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 445667777777777663322 23566777777777776666666666667777777777777666666677777777
Q ss_pred EEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcccccccc---------
Q 048796 82 FNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELL--------- 152 (555)
Q Consensus 82 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~--------- 152 (555)
|+|++|.++...+..|..+++|++|+|++|++++..+..+..+++|+.|++++|.+++.....+..+..+.
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~ 201 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTL 201 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEE
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeeccccccccc
Confidence 77777777755445566677777777777777655566666677777777777766643222222211100
Q ss_pred -------------------ccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeC
Q 048796 153 -------------------VLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDL 213 (555)
Q Consensus 153 -------------------~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 213 (555)
.....++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++..|..+..+++|+.|+|
T Consensus 202 ~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 279 (390)
T 3o6n_A 202 AIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYI 279 (390)
T ss_dssp ECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEEC
T ss_pred CCCCcceEEECCCCeeeeccccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEEC
Confidence 001124566666666666643 45667777777777777777666777777777777777
Q ss_pred CCCcCCCCCChhhh--cCCCEEEeccCCCCC
Q 048796 214 SGNQFKGEIPDKLS--LKLNEFNVSYNDLSG 242 (555)
Q Consensus 214 s~N~l~~~~p~~~~--~~L~~L~ls~N~l~~ 242 (555)
++|++++. |..+. ++|+.|++++|+++.
T Consensus 280 ~~n~l~~~-~~~~~~l~~L~~L~L~~n~l~~ 309 (390)
T 3o6n_A 280 SNNRLVAL-NLYGQPIPTLKVLDLSHNHLLH 309 (390)
T ss_dssp CSSCCCEE-ECSSSCCTTCCEEECCSSCCCC
T ss_pred CCCcCccc-CcccCCCCCCCEEECCCCccee
Confidence 77777743 22222 567777777777763
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-27 Score=248.69 Aligned_cols=242 Identities=21% Similarity=0.160 Sum_probs=208.6
Q ss_pred CcCCCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCcc
Q 048796 4 GINSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLS 80 (555)
Q Consensus 4 ~~n~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 80 (555)
..++++|++|+|++|+|+...+. .+++|++|+|++|++++..+..+..+++|+.|+|++|.+++..+..|.++++|+
T Consensus 76 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 155 (477)
T 2id5_A 76 FNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLE 155 (477)
T ss_dssp TTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCC
T ss_pred hhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCC
Confidence 35788999999999999965544 467899999999999988888889999999999999999988888999999999
Q ss_pred EEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccc---------
Q 048796 81 TFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASEL--------- 151 (555)
Q Consensus 81 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l--------- 151 (555)
+|+|++|++++..+..+..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.++........+
T Consensus 156 ~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~ 235 (477)
T 2id5_A 156 QLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCN 235 (477)
T ss_dssp EEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSC
T ss_pred EEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCc
Confidence 99999999998877889999999999999999987777788888888888888877666555433221111
Q ss_pred ------cccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChh
Q 048796 152 ------LVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDK 225 (555)
Q Consensus 152 ------~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 225 (555)
..+..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..
T Consensus 236 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 315 (477)
T 2id5_A 236 LTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESV 315 (477)
T ss_dssp CCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGG
T ss_pred ccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhH
Confidence 12446799999999999999988889999999999999999999999999999999999999999999766665
Q ss_pred hh--cCCCEEEeccCCCCCCcC
Q 048796 226 LS--LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 226 ~~--~~L~~L~ls~N~l~~~~p 245 (555)
+. ++|+.|++++|++.|.++
T Consensus 316 ~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 316 FHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp BSCGGGCCEEECCSSCEECSGG
T ss_pred cCCCcccCEEEccCCCccCccc
Confidence 55 789999999999998765
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-27 Score=255.06 Aligned_cols=256 Identities=19% Similarity=0.227 Sum_probs=142.3
Q ss_pred CCCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 6 NSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
.+.+++.|++++|.++...+. .+++|++|+|++|.|++..+..+..+++|+.|+|++|.|++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 344555555555555432221 24455555555555555554455555555555555555555555555555555555
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccc-------------
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHAS------------- 149 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~------------- 149 (555)
+|++|.|++..+..|..+++|++|+|++|.+++..|..|..+++|+.|+|++|.+++.....+..+.
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~ 208 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLA 208 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEE
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCcccccc
Confidence 5555555544444445555555555555555544444555555555555555555443222111111
Q ss_pred -------------------------------------cccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccc
Q 048796 150 -------------------------------------ELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANN 192 (555)
Q Consensus 150 -------------------------------------~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 192 (555)
....+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|
T Consensus 209 ~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 288 (597)
T 3oja_B 209 IPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNN 288 (597)
T ss_dssp CCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTS
T ss_pred CCchhheeeccCCcccccccccCCCCCEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCC
Confidence 1112334567777777777777777777777777777777777
Q ss_pred cccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccCCCCCCCCCCCcccc
Q 048796 193 HLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNFPKSSFHPGNALLI 264 (555)
Q Consensus 193 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~~~~~~~~~n~~~~ 264 (555)
.+++ +|..+..+++|+.|+|++|.++ .+|..+. ++|+.|++++|.+++..+..+..+..... .+|++.|
T Consensus 289 ~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l-~~N~~~~ 359 (597)
T 3oja_B 289 RLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTL-SHNDWDC 359 (597)
T ss_dssp CCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEEC-CSSCEEH
T ss_pred CCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEe-eCCCCCC
Confidence 7774 4555666777777777777777 4554444 67777777777777653333332222222 2555544
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-26 Score=241.55 Aligned_cols=227 Identities=22% Similarity=0.241 Sum_probs=201.9
Q ss_pred CCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|+|++..+.. +++|++|+|++|+|+++.+..+..+++|++|+|++|.|+...+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 58999999999999876654 568899999999999988889999999999999999999888888999999999999
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCC-cCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSN-QLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESL 163 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L 163 (555)
++|.|+...+..|..+++|+.|+|++| .+....+..|..+++|+.|+|++|.+++. | .+ ..+++|+.|
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~---------~~l~~L~~L 223 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NL---------TPLVGLEEL 223 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CC---------TTCTTCCEE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cc---------cccccccEE
Confidence 999999877788999999999999985 45433445688999999999999999854 3 23 334899999
Q ss_pred EccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCC
Q 048796 164 DLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLS 241 (555)
Q Consensus 164 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~ 241 (555)
+|++|.|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+. ++|+.|++++|++.
T Consensus 224 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 224 EMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp ECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred ECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999977666655 78999999999998
Q ss_pred CCcC
Q 048796 242 GPIP 245 (555)
Q Consensus 242 ~~~p 245 (555)
|.+.
T Consensus 304 CdC~ 307 (452)
T 3zyi_A 304 CDCD 307 (452)
T ss_dssp CSTT
T ss_pred CCCC
Confidence 8764
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.3e-27 Score=234.66 Aligned_cols=213 Identities=19% Similarity=0.263 Sum_probs=193.8
Q ss_pred CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEE
Q 048796 28 LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLD 107 (555)
Q Consensus 28 l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 107 (555)
..+++.|+|++|+|+.++..++ .+++|++|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..+..+++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~~lp~~l~-~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLPQFPDQAF-RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCSSCCSCGG-GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCchhcChhhh-hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 4689999999999997665554 4788999999999999 88999999999999999999999 7788999999999999
Q ss_pred cCCCcCCCCCchhhhC---------CCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccc
Q 048796 108 VSSNQLKGPIPDNFFS---------SMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDI 178 (555)
Q Consensus 108 L~~N~l~~~~~~~~~~---------~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~ 178 (555)
|++|++.+.+|..+.. +++|+.|+|++|.++ .+|..+..+ ++|++|+|++|.+++ +|..+
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l---------~~L~~L~L~~N~l~~-l~~~l 225 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANL---------QNLKSLKIRNSPLSA-LGPAI 225 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGC---------TTCCEEEEESSCCCC-CCGGG
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCC---------CCCCEEEccCCCCCc-Cchhh
Confidence 9999888889887765 999999999999998 777777666 899999999999996 56679
Q ss_pred cCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccCCCCC
Q 048796 179 GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNFPKS 254 (555)
Q Consensus 179 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~~~~ 254 (555)
..+++|+.|+|++|.+.+.+|..+..+++|++|+|++|.+.+.+|..+. ++|+.|++++|++.+.+|..+..++..
T Consensus 226 ~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L 303 (328)
T 4fcg_A 226 HHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPAN 303 (328)
T ss_dssp GGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTT
T ss_pred ccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCc
Confidence 9999999999999999999999999999999999999999999998877 899999999999999999998877654
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-26 Score=239.95 Aligned_cols=245 Identities=20% Similarity=0.158 Sum_probs=210.4
Q ss_pred CCCEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 9 TLSVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
....++.++++++ .+|.. .++++.|+|++|+|+.+.+..+..+++|++|+|++|.|++..+..|.++++|++|+|++|
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CCCEEEeCCCCcC-cCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 4678999999998 55655 468999999999999988888999999999999999999888889999999999999999
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccC-CcCccccccccccCCCCCcCEEEcc
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAI-PLRSSHASELLVLPSYPPMESLDLS 166 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~~~~l~~l~~~~~L~~L~Ls 166 (555)
+|+...+..|..+++|++|+|++|+++...+..|..+++|+.|+|++|...+.+ +..+..+ ++|++|+|+
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l---------~~L~~L~L~ 193 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGL---------SNLRYLNLA 193 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTC---------SSCCEEECT
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcc---------cccCeecCC
Confidence 999887788999999999999999999777778999999999999995443343 3345544 999999999
Q ss_pred CCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCc
Q 048796 167 GNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPI 244 (555)
Q Consensus 167 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~ 244 (555)
+|.++.. | .+..+++|+.|+|++|.|++..|..|.++++|+.|+|++|+|++..+..+. ++|+.|++++|++++..
T Consensus 194 ~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 271 (440)
T 3zyj_A 194 MCNLREI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLP 271 (440)
T ss_dssp TSCCSSC-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCC
T ss_pred CCcCccc-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccC
Confidence 9999954 4 588999999999999999998899999999999999999999988887776 79999999999999877
Q ss_pred CccccCCCCCC--CCCCCccccc
Q 048796 245 PENLRNFPKSS--FHPGNALLIF 265 (555)
Q Consensus 245 p~~l~~~~~~~--~~~~n~~~~~ 265 (555)
+..+..++... ...+|++.|.
T Consensus 272 ~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 272 HDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp TTTTSSCTTCCEEECCSSCEECS
T ss_pred hhHhccccCCCEEEcCCCCccCC
Confidence 76666655432 1236766553
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.9e-27 Score=231.88 Aligned_cols=228 Identities=23% Similarity=0.260 Sum_probs=200.8
Q ss_pred CCCCEEECCCCcCCCCCC---CCCCCCCEEEcCCCcCCCCC--cccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 8 TTLSVLNLSSNSLSGTLP---TSLKSCVILDLSRNMISGDI--SDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~---~~l~~L~~L~L~~N~l~~~~--~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
++|++|+|++|+++...+ ..+++|++|+|++|+++... +..+..+++|++|+|++|.++ .++..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 589999999999995444 34678999999999998543 344456788999999999998 567778999999999
Q ss_pred EeeCCcCCCCCc-hhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccc-cCCcCccccccccccCCCCCc
Q 048796 83 NIRNNSVTGTLP-SLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSG-AIPLRSSHASELLVLPSYPPM 160 (555)
Q Consensus 83 ~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~-~~p~~~~~~~~l~~l~~~~~L 160 (555)
+|++|.+++..+ ..+..+++|++|++++|.+.+..+..+..+++|+.|+|++|.+.+ ..|..+..+ ++|
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l---------~~L 177 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTEL---------RNL 177 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTC---------TTC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhC---------cCC
Confidence 999999997665 678999999999999999998888889999999999999999987 567666665 899
Q ss_pred CEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh---cCCCEEEecc
Q 048796 161 ESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS---LKLNEFNVSY 237 (555)
Q Consensus 161 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~~L~~L~ls~ 237 (555)
++|+|++|.+++..|..|..+++|+.|+|++|.+++..+..+..+++|+.||+++|++++..|..+. .+|+.|++++
T Consensus 178 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~ 257 (306)
T 2z66_A 178 TFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQ 257 (306)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTT
T ss_pred CEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccC
Confidence 9999999999998899999999999999999999988888899999999999999999998887765 3899999999
Q ss_pred CCCCCCcC
Q 048796 238 NDLSGPIP 245 (555)
Q Consensus 238 N~l~~~~p 245 (555)
|+++|.++
T Consensus 258 N~~~~~c~ 265 (306)
T 2z66_A 258 NDFACTCE 265 (306)
T ss_dssp CCEECSGG
T ss_pred CCeecccC
Confidence 99998653
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.5e-26 Score=227.64 Aligned_cols=217 Identities=22% Similarity=0.239 Sum_probs=130.3
Q ss_pred CCCEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 9 TLSVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
+|+.++++++.++ .+|.. .++|++|+|++|+|++..+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 110 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred CCeEEEecCCCcc-ccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCC
Confidence 6777788777777 34443 356777888888777776666777777888888888777766777777777888888777
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccc--cCCcCccccccccccCCCCCcCEEEc
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSG--AIPLRSSHASELLVLPSYPPMESLDL 165 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~--~~p~~~~~~~~l~~l~~~~~L~~L~L 165 (555)
.++ .+|..+. ++|++|++++|++++..+..+..+++|+.|++++|.+.. ..+..+..+ ++|++|++
T Consensus 111 ~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l---------~~L~~L~l 178 (330)
T 1xku_A 111 QLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM---------KKLSYIRI 178 (330)
T ss_dssp CCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGC---------TTCCEEEC
T ss_pred cCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCC---------CCcCEEEC
Confidence 777 3343332 567777777777776666667777777777777777753 344444444 44444555
Q ss_pred cCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCC
Q 048796 166 SGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLS 241 (555)
Q Consensus 166 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~ 241 (555)
++|.++. +|..+. ++|+.|++++|.+++..+..+..+++|+.|++++|.+++..+..+. ++|+.|++++|.++
T Consensus 179 ~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 179 ADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp CSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred CCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 5544442 222221 3444444444444444444444444444444444444443333333 34444444444444
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-26 Score=250.98 Aligned_cols=251 Identities=23% Similarity=0.227 Sum_probs=204.4
Q ss_pred CcCCCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCC-cccccCCCCccEEEccCCcCCCCC--CccccCCC
Q 048796 4 GINSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDI-SDMQNWEANLEILDLSSNKLSGSL--PNLTSQFD 77 (555)
Q Consensus 4 ~~n~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~-~~~~~~~~~L~~L~Ls~N~l~~~~--~~~~~~l~ 77 (555)
..++++|++|++++|.+++..|. .+++|++|++++|.+.+.. ...+..+++|++|+|++|.+++.. +..+..++
T Consensus 297 l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~ 376 (606)
T 3t6q_A 297 LVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLS 376 (606)
T ss_dssp CCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCT
T ss_pred hcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCC
Confidence 35678999999999999976553 4678999999999988544 456788889999999999998655 77888999
Q ss_pred CccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCch-hhhCCCCCCeEEccCCcccccCCcCccccccccccCC
Q 048796 78 RLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPD-NFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPS 156 (555)
Q Consensus 78 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~ 156 (555)
+|++|++++|.+.+..+..+..+++|+.|++++|++.+..+. .+..+++|+.|++++|.+.+..|..+..+
T Consensus 377 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-------- 448 (606)
T 3t6q_A 377 HLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGL-------- 448 (606)
T ss_dssp TCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTC--------
T ss_pred CCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCC--------
Confidence 999999999999988888899999999999999999876554 47889999999999999988877777666
Q ss_pred CCCcCEEEccCCcCCCc---CCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCC
Q 048796 157 YPPMESLDLSGNALTGV---LPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLN 231 (555)
Q Consensus 157 ~~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~ 231 (555)
++|++|+|++|.+++. .+..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..|..+. ..|
T Consensus 449 -~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L- 526 (606)
T 3t6q_A 449 -PALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI- 526 (606)
T ss_dssp -TTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-
T ss_pred -CCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-
Confidence 8889999999988762 335688888999999999999888888888899999999999999888887776 677
Q ss_pred EEEeccCCCCCCcCccccCCCCCC--CCCCCcccc
Q 048796 232 EFNVSYNDLSGPIPENLRNFPKSS--FHPGNALLI 264 (555)
Q Consensus 232 ~L~ls~N~l~~~~p~~l~~~~~~~--~~~~n~~~~ 264 (555)
.|++++|++++..|..+..++... ...+|+..|
T Consensus 527 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 561 (606)
T 3t6q_A 527 YLNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561 (606)
T ss_dssp EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEEC
T ss_pred EEECcCCcccccCHhhcccCCCCCEEeCCCCCccc
Confidence 899999999887776654433321 123676655
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.4e-26 Score=227.53 Aligned_cols=235 Identities=23% Similarity=0.246 Sum_probs=178.9
Q ss_pred CCCEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 9 TLSVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
+|+.+++++|.++ .+|.. .++|++|+|++|+|++..+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred cCCEEECCCCCcc-ccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 6899999999988 45544 468899999999998887777888888999999999998877888899999999999999
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccc--cCCcCccccccccccC----------
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSG--AIPLRSSHASELLVLP---------- 155 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~--~~p~~~~~~~~l~~l~---------- 155 (555)
.++ .+|..+. ++|++|++++|++++..+..|..+++|+.|++++|.++. ..+..+..+ .+..+.
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~ 188 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIP 188 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCC
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccC
Confidence 988 4444443 789999999999986666678888999999999998853 445544433 111110
Q ss_pred --CCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCC
Q 048796 156 --SYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLN 231 (555)
Q Consensus 156 --~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~ 231 (555)
-.++|++|+|++|.+++..+..|..+++|+.|+|++|.+++..+..+..+++|+.|++++|+++ .+|..+. ++|+
T Consensus 189 ~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~ 267 (332)
T 2ft3_A 189 KDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQ 267 (332)
T ss_dssp SSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCC
T ss_pred ccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCC
Confidence 1146778888888888777777788888888888888888777667777888888888888887 5665555 6788
Q ss_pred EEEeccCCCCCCcCcccc
Q 048796 232 EFNVSYNDLSGPIPENLR 249 (555)
Q Consensus 232 ~L~ls~N~l~~~~p~~l~ 249 (555)
.|++++|++++..+..+.
T Consensus 268 ~L~l~~N~l~~~~~~~~~ 285 (332)
T 2ft3_A 268 VVYLHTNNITKVGVNDFC 285 (332)
T ss_dssp EEECCSSCCCBCCTTSSS
T ss_pred EEECCCCCCCccChhHcc
Confidence 888888888765554443
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-26 Score=251.38 Aligned_cols=241 Identities=21% Similarity=0.172 Sum_probs=213.2
Q ss_pred CcCCCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCc-cccCCCCc
Q 048796 4 GINSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPN-LTSQFDRL 79 (555)
Q Consensus 4 ~~n~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~-~~~~l~~L 79 (555)
..++++|++|+|++|+++ .+|.. +++|++|+|++|.+++..+..+..+++|+.|+|++|.+.+.++. .+..+++|
T Consensus 274 ~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L 352 (606)
T 3t6q_A 274 FHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENL 352 (606)
T ss_dssp TTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTC
T ss_pred hccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcC
Confidence 346789999999999998 56654 56899999999999988888888899999999999999866654 58999999
Q ss_pred cEEEeeCCcCCCCC--chhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcC-ccccccccccCC
Q 048796 80 STFNIRNNSVTGTL--PSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLR-SSHASELLVLPS 156 (555)
Q Consensus 80 ~~L~L~~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~-~~~~~~l~~l~~ 156 (555)
++|++++|.+++.. +..+..+++|++|++++|++.+..+..+..+++|+.|++++|.+.+..+.. +..+
T Consensus 353 ~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l-------- 424 (606)
T 3t6q_A 353 RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNL-------- 424 (606)
T ss_dssp CEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTC--------
T ss_pred CEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCc--------
Confidence 99999999998765 778999999999999999999888899999999999999999998776543 5544
Q ss_pred CCCcCEEEccCCcCCCcCCccccCccccceeecccccccCC---CchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCC
Q 048796 157 YPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGK---MPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLN 231 (555)
Q Consensus 157 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~ 231 (555)
++|++|++++|.+++..|..+..+++|+.|+|++|.+++. .+..+..+++|+.|++++|.+++..|..+. ++|+
T Consensus 425 -~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 503 (606)
T 3t6q_A 425 -HLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMN 503 (606)
T ss_dssp -TTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred -ccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCC
Confidence 8999999999999999999999999999999999999862 336788999999999999999988888776 8999
Q ss_pred EEEeccCCCCCCcCccccCCCCC
Q 048796 232 EFNVSYNDLSGPIPENLRNFPKS 254 (555)
Q Consensus 232 ~L~ls~N~l~~~~p~~l~~~~~~ 254 (555)
.|++++|++++..|..+..++..
T Consensus 504 ~L~Ls~N~l~~~~~~~l~~l~~L 526 (606)
T 3t6q_A 504 HVDLSHNRLTSSSIEALSHLKGI 526 (606)
T ss_dssp EEECCSSCCCGGGGGGGTTCCSC
T ss_pred EEECCCCccCcCChhHhCccccc
Confidence 99999999999999888766544
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-27 Score=239.49 Aligned_cols=205 Identities=19% Similarity=0.166 Sum_probs=132.7
Q ss_pred CCCCCCEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 6 NSTTLSVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
.|......++++|+++ .+|.. .++|++|+|++|+|+++.+..+..+++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCCeEeeCCCCCcc-cccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 3455556677777776 34433 346777777777777666656666677777777777777666666777777777777
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCCCCc-hhhhCCCCCCeEEccCC-cccccCCcCccccccccccCCCCCcCE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIP-DNFFSSMALTNLNLSGN-GFSGAIPLRSSHASELLVLPSYPPMES 162 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~Ls~N-~l~~~~p~~~~~~~~l~~l~~~~~L~~ 162 (555)
++|.+++..+..+..+++|++|+|++|+++...+ ..+..+++|+.|++++| .+....+..+..+ ++|++
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l---------~~L~~ 178 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGL---------TFLEE 178 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC---------CEEEE
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCC---------CCCCE
Confidence 7777775555556777777777777777763322 35666777777777777 3554444445444 66677
Q ss_pred EEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCC
Q 048796 163 LDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKG 220 (555)
Q Consensus 163 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 220 (555)
|++++|.+++..|..|..+++|+.|++++|.++......+..+++|+.|++++|.+++
T Consensus 179 L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~ 236 (353)
T 2z80_A 179 LEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDT 236 (353)
T ss_dssp EEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTT
T ss_pred EECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccc
Confidence 7777777776666666666667777777666653333333445666666666666665
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.7e-26 Score=234.99 Aligned_cols=253 Identities=20% Similarity=0.174 Sum_probs=191.5
Q ss_pred CCCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 6 NSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
++++|++|+|++|.+++..+. .+++|++|+|++|.+++..+..+..+++|++|+|++|.++...+..|..+++|++|
T Consensus 67 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 67 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTL 146 (390)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEE
Confidence 568899999999999876554 46688999999999998888888888899999999999996666667899999999
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCC-------------------CeEEccCCcccccCCc
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMAL-------------------TNLNLSGNGFSGAIPL 143 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L-------------------~~L~Ls~N~l~~~~p~ 143 (555)
+|++|.+++..+..+..+++|++|++++|++++.. +..+++| +.|++++|.+......
T Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~ 223 (390)
T 3o6n_A 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP 223 (390)
T ss_dssp ECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECC
T ss_pred ECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccccccCCCCcceEEECCCCeeeecccc
Confidence 99999999888888999999999999999987542 2333333 3344444433322111
Q ss_pred Ccccc----------ccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeC
Q 048796 144 RSSHA----------SELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDL 213 (555)
Q Consensus 144 ~~~~~----------~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 213 (555)
....+ .....+..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++ ++..+..+++|+.|++
T Consensus 224 ~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L 302 (390)
T 3o6n_A 224 VNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 302 (390)
T ss_dssp CCSSCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEEC
T ss_pred ccccccEEECCCCCCcccHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEEC
Confidence 11111 112234456899999999999999889999999999999999999985 5667788999999999
Q ss_pred CCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccCCCCCCCCCCCcccc
Q 048796 214 SGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNFPKSSFHPGNALLI 264 (555)
Q Consensus 214 s~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~~~~~~~~~n~~~~ 264 (555)
++|+++ .+|..+. ++|+.|++++|+++......+..+..... .+|+..|
T Consensus 303 ~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l-~~N~~~~ 353 (390)
T 3o6n_A 303 SHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTL-SHNDWDC 353 (390)
T ss_dssp CSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEEC-CSSCEEH
T ss_pred CCCcce-ecCccccccCcCCEEECCCCccceeCchhhccCCEEEc-CCCCccc
Confidence 999999 4555554 89999999999998654333333332223 2676655
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.2e-26 Score=222.63 Aligned_cols=224 Identities=21% Similarity=0.166 Sum_probs=195.1
Q ss_pred CEEECCCCcCCCCCCCCCC-CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcC
Q 048796 11 SVLNLSSNSLSGTLPTSLK-SCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSV 89 (555)
Q Consensus 11 ~~L~Ls~N~l~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 89 (555)
..++..+.+++ .+|..++ +|++|+|++|+|++..+..+..+++|++|+|++|.+++..+..|..+++|++|+|++|.+
T Consensus 10 ~~~~c~~~~l~-~ip~~l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 10 ITYQCMELNFY-KIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp TEEECTTSCCS-SCCSSSCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred ceEEecCCCcc-ccCCCCCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 45777888887 5666554 699999999999988887888889999999999999988888899999999999999999
Q ss_pred CCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCccccc-CCcCccccccccccCCCCCcCEEEccCC
Q 048796 90 TGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGA-IPLRSSHASELLVLPSYPPMESLDLSGN 168 (555)
Q Consensus 90 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~-~p~~~~~~~~l~~l~~~~~L~~L~Ls~N 168 (555)
++..+..+..+++|++|++++|++.+..+..+..+++|+.|++++|.+++. +|..+..+ ++|++|+|++|
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l---------~~L~~L~Ls~N 159 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNL---------TNLEHLDLSSN 159 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGC---------TTCCEEECCSS
T ss_pred CccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccC---------CCCCEEECCCC
Confidence 988888999999999999999999977776899999999999999999864 47767666 89999999999
Q ss_pred cCCCcCCccccCccccc----eeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCC
Q 048796 169 ALTGVLPSDIGNMGRLR----LLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSG 242 (555)
Q Consensus 169 ~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~ 242 (555)
.+++..+..|..+.+|+ .|++++|.+++..+..+.. .+|+.|++++|.+++..+..+. ++|+.|++++|++.|
T Consensus 160 ~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 160 KIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred CCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 99988888888888887 8999999999766655554 5899999999999976665554 789999999999998
Q ss_pred CcC
Q 048796 243 PIP 245 (555)
Q Consensus 243 ~~p 245 (555)
.+|
T Consensus 239 ~c~ 241 (276)
T 2z62_A 239 SCP 241 (276)
T ss_dssp CTT
T ss_pred cCC
Confidence 876
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=225.96 Aligned_cols=226 Identities=23% Similarity=0.295 Sum_probs=199.0
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|+|++..+. .+++|++|+|++|+++++.+..+..+++|++|+|++|.++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 5899999999999976654 4678999999999999988888999999999999999998 4555443 79999999
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCC--CCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKG--PIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMES 162 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~--~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~ 162 (555)
++|.+++..+..+..+++|+.|++++|.+.. ..+..+..+++|+.|++++|.++. +|..+. ++|++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~-----------~~L~~ 196 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP-----------PSLTE 196 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC-----------TTCSE
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc-----------ccCCE
Confidence 9999998888889999999999999999963 667889999999999999999984 443221 78999
Q ss_pred EEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCC
Q 048796 163 LDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDL 240 (555)
Q Consensus 163 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l 240 (555)
|+|++|.+++..+..|..+++|+.|+|++|.+++..+..+..+++|+.|++++|.++ .+|..+. ++|+.|++++|++
T Consensus 197 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i 275 (330)
T 1xku_A 197 LHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNI 275 (330)
T ss_dssp EECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCC
T ss_pred EECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcC
Confidence 999999999988999999999999999999999888888999999999999999999 6776665 7899999999999
Q ss_pred CCCcCcccc
Q 048796 241 SGPIPENLR 249 (555)
Q Consensus 241 ~~~~p~~l~ 249 (555)
++..+..+.
T Consensus 276 ~~~~~~~f~ 284 (330)
T 1xku_A 276 SAIGSNDFC 284 (330)
T ss_dssp CCCCTTSSS
T ss_pred CccChhhcC
Confidence 987766654
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.2e-26 Score=248.45 Aligned_cols=247 Identities=20% Similarity=0.169 Sum_probs=177.7
Q ss_pred CCCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 6 NSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
++++|++|+|++|.|++..+.. +++|++|+|++|.|++.++..+..+++|+.|+|++|.|++..+..|..+++|++|
T Consensus 73 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 152 (597)
T 3oja_B 73 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTL 152 (597)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEE
Confidence 4567777777777777655433 4566777777777777666666666777777777777775555556777777777
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCC---------------------------------------------
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPI--------------------------------------------- 117 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~--------------------------------------------- 117 (555)
+|++|.+++..|..|..+++|+.|+|++|.+++..
T Consensus 153 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~ 232 (597)
T 3oja_B 153 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNV 232 (597)
T ss_dssp ECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCS
T ss_pred EeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCC
Confidence 77777777666666777777777777777665321
Q ss_pred --------------chhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccc
Q 048796 118 --------------PDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGR 183 (555)
Q Consensus 118 --------------~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 183 (555)
+..+..+++|+.|+|++|.+.+..|..+..+ ++|+.|+|++|.+++ +|..+..+++
T Consensus 233 ~L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l---------~~L~~L~Ls~N~l~~-l~~~~~~l~~ 302 (597)
T 3oja_B 233 ELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKM---------QRLERLYISNNRLVA-LNLYGQPIPT 302 (597)
T ss_dssp CCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTC---------SSCCEEECTTSCCCE-EECSSSCCTT
T ss_pred CCCEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHHhcCc---------cCCCEEECCCCCCCC-CCcccccCCC
Confidence 1235556677777777777777666666555 999999999999996 4667788999
Q ss_pred cceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCCCcCc-cccCCCCCCCCCCCcc
Q 048796 184 LRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPE-NLRNFPKSSFHPGNAL 262 (555)
Q Consensus 184 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~~~p~-~l~~~~~~~~~~~n~~ 262 (555)
|+.|+|++|.++ .+|..+..+++|+.|+|++|.|++..+ ...++|+.|++++|+++|.... ++..+....+. ++..
T Consensus 303 L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~-~~~~ 379 (597)
T 3oja_B 303 LKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKL-STHHTLKNLTLSHNDWDCNSLRALFRNVARPAVD-DADQ 379 (597)
T ss_dssp CCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCC-CTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBC-CCCC
T ss_pred CcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcCh-hhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccc-cccc
Confidence 999999999999 578888899999999999999996543 3337999999999999986543 34444444332 4444
Q ss_pred ccc
Q 048796 263 LIF 265 (555)
Q Consensus 263 ~~~ 265 (555)
.|.
T Consensus 380 ~C~ 382 (597)
T 3oja_B 380 HCK 382 (597)
T ss_dssp CCC
T ss_pred cCC
Confidence 443
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=245.70 Aligned_cols=133 Identities=22% Similarity=0.190 Sum_probs=106.0
Q ss_pred CCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
+++++|||++|+|++..+.. +++|++|+|++|+|+++.++.|..+++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36888888888888665544 567788888888888888888888888888888888888766677888888888888
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCC-CCchhhhCCCCCCeEEccCCccccc
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKG-PIPDNFFSSMALTNLNLSGNGFSGA 140 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~~~~L~~L~Ls~N~l~~~ 140 (555)
++|+|++..+..|+.+++|++|+|++|.+++ ..|..+..+++|+.|+|++|.+++.
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 188 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 188 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccc
Confidence 8888887777778888888888888888865 3567777788888888888877643
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=226.31 Aligned_cols=239 Identities=22% Similarity=0.249 Sum_probs=181.8
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|++++..+. .+++|++|+|++|+|++..+..+..+++|++|+|++|.++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 5788999999988866554 3567888999999988887778888888999999999888 4554443 78888888
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCC--CCCchhhhCCCCCCeEEccCCcccccCCcCccccccc-----------
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLK--GPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASEL----------- 151 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~--~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l----------- 151 (555)
++|.++...+..+..+++|+.|++++|.++ +..+..+..+ +|+.|++++|.+++........+..+
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~ 209 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIE 209 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCccccCCCCEEECCCCcCCccC
Confidence 888888777777888888888888888885 2455566555 66666666666654221111111111
Q ss_pred -cccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh---
Q 048796 152 -LVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--- 227 (555)
Q Consensus 152 -~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--- 227 (555)
..+..+++|++|+|++|.+++..+..|..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+|++..+..+.
T Consensus 210 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 288 (332)
T 2ft3_A 210 LEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVG 288 (332)
T ss_dssp TTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSS
T ss_pred HHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccc
Confidence 12345689999999999999988889999999999999999999 6888899999999999999999976655443
Q ss_pred -----cCCCEEEeccCCCC--CCcCccccCC
Q 048796 228 -----LKLNEFNVSYNDLS--GPIPENLRNF 251 (555)
Q Consensus 228 -----~~L~~L~ls~N~l~--~~~p~~l~~~ 251 (555)
..++.|++++|++. +..|..+..+
T Consensus 289 ~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l 319 (332)
T 2ft3_A 289 FGVKRAYYNGISLFNNPVPYWEVQPATFRCV 319 (332)
T ss_dssp CCSSSCCBSEEECCSSSSCGGGSCGGGGTTB
T ss_pred cccccccccceEeecCcccccccCccccccc
Confidence 45789999999997 4444444443
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.2e-25 Score=214.81 Aligned_cols=201 Identities=24% Similarity=0.284 Sum_probs=109.5
Q ss_pred CCCEEECCCCcCCCCCCCCC-CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 9 TLSVLNLSSNSLSGTLPTSL-KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
+++.+++++++++. +|..+ ++|++|+|++|+|+.+.+..+..+++|++|+|++|.++...+..|..+++|++|+|++|
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n 95 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDN 95 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSS
T ss_pred CCCEEEccCCCCCc-cCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCC
Confidence 35566666666663 44333 35666666666666555555555566666666666666444445556666666666666
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccC
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSG 167 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~ 167 (555)
.+++..+..+..+++|++|+|++|++++..+..|..+++|+.|+|++|.+++..+..+..+ ++|++|+|++
T Consensus 96 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l---------~~L~~L~L~~ 166 (270)
T 2o6q_A 96 KLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKL---------TSLKELRLYN 166 (270)
T ss_dssp CCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---------TTCCEEECCS
T ss_pred cCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCC---------cccceeEecC
Confidence 6665555555556666666666666655444455555555555555555554333333333 4555555555
Q ss_pred CcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCC
Q 048796 168 NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFK 219 (555)
Q Consensus 168 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 219 (555)
|.+++..+..|..+++|+.|+|++|.|++..+..+..+++|+.|+|++|.+.
T Consensus 167 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 167 NQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 5555444444555555555555555555443344444455555555555444
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=226.49 Aligned_cols=229 Identities=20% Similarity=0.201 Sum_probs=197.5
Q ss_pred CCCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEee
Q 048796 7 STTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIR 85 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 85 (555)
+.++..+++..+.+..... ..+++|+.|++++|.++... .+..+++|++|+|++|.+++. ..+..+++|++|+|+
T Consensus 18 ~~~l~~l~l~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~--~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQ--GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHHHTCSCTTSEECHHHHTTCCEEECTTSCCCCCT--TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT
T ss_pred HHHHHHHHhcCcccccccccccccceeeeeeCCCCccccc--ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC
Confidence 3455667777777775444 35789999999999998653 356678999999999999853 478899999999999
Q ss_pred CCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEc
Q 048796 86 NNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDL 165 (555)
Q Consensus 86 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~L 165 (555)
+|.+++..+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|.+++..+..+..+ ++|+.|+|
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---------~~L~~L~l 164 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKL---------TNLTELDL 164 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---------TTCCEEEC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccC---------ccCCEEEC
Confidence 999998888889999999999999999997777778999999999999999997777666665 89999999
Q ss_pred cCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCCCcC
Q 048796 166 SGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 166 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~~~p 245 (555)
++|.+++..+..|..+++|+.|+|++|++++..+..+..+++|+.|++++|.+.+..| .++.++++.|.++|.+|
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~-----~l~~l~~~~n~~~g~ip 239 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-----GIRYLSEWINKHSGVVR 239 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT-----TTHHHHHHHHHTGGGBB
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc-----HHHHHHHHHHhCCCccc
Confidence 9999998888888999999999999999999888889999999999999999997655 57888999999999999
Q ss_pred ccccCCCC
Q 048796 246 ENLRNFPK 253 (555)
Q Consensus 246 ~~l~~~~~ 253 (555)
.++.....
T Consensus 240 ~~~~~~~~ 247 (272)
T 3rfs_A 240 NSAGSVAP 247 (272)
T ss_dssp CTTSCBCG
T ss_pred CcccccCC
Confidence 88766543
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-26 Score=254.77 Aligned_cols=233 Identities=20% Similarity=0.338 Sum_probs=201.5
Q ss_pred CCcCC---CCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcC-----------------------------------
Q 048796 3 HGINS---TTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMI----------------------------------- 41 (555)
Q Consensus 3 ~~~n~---~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l----------------------------------- 41 (555)
.|+.| .+++.|+|++|+++|.+|.. +++|++|+|++|.+
T Consensus 73 ~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~ 152 (636)
T 4eco_A 73 PGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDY 152 (636)
T ss_dssp TTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCC
T ss_pred CCeEEcCCCCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhcc
Confidence 34455 47899999999999988864 66788999998854
Q ss_pred -------------------------------------------CCCCcccccCCCCccEEEccCCcCCCC----------
Q 048796 42 -------------------------------------------SGDISDMQNWEANLEILDLSSNKLSGS---------- 68 (555)
Q Consensus 42 -------------------------------------------~~~~~~~~~~~~~L~~L~Ls~N~l~~~---------- 68 (555)
++ ++..+..+++|++|+|++|.+++.
T Consensus 153 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~ 231 (636)
T 4eco_A 153 DPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENEN 231 (636)
T ss_dssp CGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTT
T ss_pred CchhhHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccc
Confidence 23 345577788999999999999975
Q ss_pred -------CCcccc--CCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCc-CCC-CCchhhhCC------CCCCeEE
Q 048796 69 -------LPNLTS--QFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ-LKG-PIPDNFFSS------MALTNLN 131 (555)
Q Consensus 69 -------~~~~~~--~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~-~~~~~~~~~------~~L~~L~ 131 (555)
+|..++ ++++|++|+|++|.+.+.+|..+..+++|++|+|++|+ +++ .+|..++.+ ++|+.|+
T Consensus 232 ~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~ 311 (636)
T 4eco_A 232 SEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIY 311 (636)
T ss_dssp SHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEE
T ss_pred cchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEE
Confidence 898888 99999999999999999999999999999999999998 887 788888876 8999999
Q ss_pred ccCCcccccCCc--CccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCC-C
Q 048796 132 LSGNGFSGAIPL--RSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGA-L 208 (555)
Q Consensus 132 Ls~N~l~~~~p~--~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L 208 (555)
|++|.++ .+|. .++.+ ++|++|+|++|.++|.+| .|..+++|+.|+|++|.++ .+|..+..+++ |
T Consensus 312 L~~n~l~-~ip~~~~l~~l---------~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L 379 (636)
T 4eco_A 312 IGYNNLK-TFPVETSLQKM---------KKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQV 379 (636)
T ss_dssp CCSSCCS-SCCCHHHHTTC---------TTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTC
T ss_pred CCCCcCC-ccCchhhhccC---------CCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccC
Confidence 9999998 7776 66666 899999999999998888 8999999999999999999 78888999999 9
Q ss_pred CEEeCCCCcCCCCCChhhh----cCCCEEEeccCCCCCCcCcccc
Q 048796 209 EYLDLSGNQFKGEIPDKLS----LKLNEFNVSYNDLSGPIPENLR 249 (555)
Q Consensus 209 ~~L~Ls~N~l~~~~p~~~~----~~L~~L~ls~N~l~~~~p~~l~ 249 (555)
++|++++|.++ .+|..+. .+|+.|++++|.+++.+|..+.
T Consensus 380 ~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 423 (636)
T 4eco_A 380 ENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFD 423 (636)
T ss_dssp CEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSC
T ss_pred cEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhc
Confidence 99999999999 7777655 2799999999999998887765
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-25 Score=246.30 Aligned_cols=234 Identities=23% Similarity=0.250 Sum_probs=134.5
Q ss_pred cCCCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCc----------------------------CCCCCcccccCCC
Q 048796 5 INSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNM----------------------------ISGDISDMQNWEA 53 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~----------------------------l~~~~~~~~~~~~ 53 (555)
.++++|++|++++|.+++..+.. +++|++|+|++|. ++++.+..+..++
T Consensus 326 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~ 405 (680)
T 1ziw_A 326 QWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLG 405 (680)
T ss_dssp TTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCT
T ss_pred ccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCC
Confidence 35677888888888887665543 3455566665554 3333334444444
Q ss_pred CccEEEccCCcCCCCCC-ccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCC--CCCchhhhCCCCCCeE
Q 048796 54 NLEILDLSSNKLSGSLP-NLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLK--GPIPDNFFSSMALTNL 130 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~--~~~~~~~~~~~~L~~L 130 (555)
+|+.|+|++|.+++.++ ..+.++++|++|+|++|++.+..+..+..+++|+.|++++|.+. +..|..+..+++|+.|
T Consensus 406 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L 485 (680)
T 1ziw_A 406 HLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTIL 485 (680)
T ss_dssp TCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEE
T ss_pred CCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEE
Confidence 45555555555543333 34445555555555555544444444444555555555555443 3445555666666666
Q ss_pred EccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCC--------ccccCccccceeecccccccCCCchhc
Q 048796 131 NLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLP--------SDIGNMGRLRLLNLANNHLSGKMPSEL 202 (555)
Q Consensus 131 ~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~L~~N~l~~~~~~~~ 202 (555)
+|++|.+++..+..+..+ ++|++|+|++|.+++..+ ..|.++++|+.|+|++|+|+...+..|
T Consensus 486 ~Ls~N~l~~i~~~~~~~l---------~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~ 556 (680)
T 1ziw_A 486 DLSNNNIANINDDMLEGL---------EKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVF 556 (680)
T ss_dssp ECCSSCCCCCCTTTTTTC---------TTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred ECCCCCCCcCChhhhccc---------cccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHc
Confidence 666666665544444444 666777777776664321 225666677777777777764444456
Q ss_pred cCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCcc
Q 048796 203 SKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPEN 247 (555)
Q Consensus 203 ~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~ 247 (555)
.++++|+.|+|++|+|++..+..+. ++|+.|++++|++++..|..
T Consensus 557 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 603 (680)
T 1ziw_A 557 KDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKV 603 (680)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHH
T ss_pred ccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhH
Confidence 6777777777777777754444443 56777777777777655543
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-26 Score=231.38 Aligned_cols=228 Identities=21% Similarity=0.184 Sum_probs=184.0
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|++++..+. .+++|++|+|++|+|++..+..+..+++|++|+|++|.+++..+..+.++++|++|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 5899999999999976553 4678999999999999888888889999999999999999666666899999999999
Q ss_pred eCCcCCCCCc-hhccCCCCccEEEcCCC-cCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCE
Q 048796 85 RNNSVTGTLP-SLLEISPRLVTLDVSSN-QLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMES 162 (555)
Q Consensus 85 ~~N~l~~~~~-~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~ 162 (555)
++|+++.... ..+..+++|++|++++| .+....+..+..+++|+.|++++|.+.+..|..+..+ ++|++
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l---------~~L~~ 202 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSI---------QNVSH 202 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTC---------SEEEE
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhcc---------ccCCe
Confidence 9999996554 57899999999999999 4766667789999999999999999998888877766 89999
Q ss_pred EEccCCcCCCcCCccccCccccceeecccccccCCCc-------------------------------hhccCCCCCCEE
Q 048796 163 LDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMP-------------------------------SELSKLGALEYL 211 (555)
Q Consensus 163 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-------------------------------~~~~~l~~L~~L 211 (555)
|++++|.++......+..+++|+.|++++|.+++..+ ..+..+++|+.|
T Consensus 203 L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L 282 (353)
T 2z80_A 203 LILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLEL 282 (353)
T ss_dssp EEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEE
T ss_pred ecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEE
Confidence 9999999986544455668999999999999987433 334556666666
Q ss_pred eCCCCcCCCCCChhh-h--cCCCEEEeccCCCCCCcC
Q 048796 212 DLSGNQFKGEIPDKL-S--LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 212 ~Ls~N~l~~~~p~~~-~--~~L~~L~ls~N~l~~~~p 245 (555)
|+++|+|+ .+|..+ . ++|+.|++++|++.|.+|
T Consensus 283 ~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 283 EFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 66666666 334332 2 566666666666666554
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-26 Score=251.68 Aligned_cols=229 Identities=22% Similarity=0.324 Sum_probs=185.8
Q ss_pred CcCCCCCCEEECCCCcCCCC-----------------CCCC-----CCCCCEEEcCCCcCCCCCcccccCCCCccEEEcc
Q 048796 4 GINSTTLSVLNLSSNSLSGT-----------------LPTS-----LKSCVILDLSRNMISGDISDMQNWEANLEILDLS 61 (555)
Q Consensus 4 ~~n~~~L~~L~Ls~N~l~~~-----------------~~~~-----l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls 61 (555)
..++++|++|+|++|.|++. +|.. +++|++|+|++|++.+..+..+..+++|++|+|+
T Consensus 202 l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 281 (636)
T 4eco_A 202 VMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVA 281 (636)
T ss_dssp GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECT
T ss_pred HhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECc
Confidence 45788999999999999984 6654 5578899999999988888888888899999999
Q ss_pred CCc-CCC-CCCccccCC------CCccEEEeeCCcCCCCCch--hccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEE
Q 048796 62 SNK-LSG-SLPNLTSQF------DRLSTFNIRNNSVTGTLPS--LLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLN 131 (555)
Q Consensus 62 ~N~-l~~-~~~~~~~~l------~~L~~L~L~~N~l~~~~~~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ 131 (555)
+|. +++ .+|..++.+ ++|++|+|++|+++ .+|. .+..+++|++|+|++|+++|.+| .+..+++|+.|+
T Consensus 282 ~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~ 359 (636)
T 4eco_A 282 CNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLN 359 (636)
T ss_dssp TCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEE
T ss_pred CCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEE
Confidence 998 887 788877776 89999999999998 7777 88999999999999999988888 888888999999
Q ss_pred ccCCcccccCCcCccccccccccCCCCC-cCEEEccCCcCCCcCCccccCcc--ccceeecccccccCCCchhcc-----
Q 048796 132 LSGNGFSGAIPLRSSHASELLVLPSYPP-MESLDLSGNALTGVLPSDIGNMG--RLRLLNLANNHLSGKMPSELS----- 203 (555)
Q Consensus 132 Ls~N~l~~~~p~~~~~~~~l~~l~~~~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~~~~~~----- 203 (555)
|++|.++ .+|..+..+ ++ |++|+|++|.++ .+|..+..+. +|+.|++++|.+++.+|..+.
T Consensus 360 L~~N~l~-~lp~~l~~l---------~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~ 428 (636)
T 4eco_A 360 LAYNQIT-EIPANFCGF---------TEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPT 428 (636)
T ss_dssp CCSSEEE-ECCTTSEEE---------CTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSS
T ss_pred CCCCccc-cccHhhhhh---------cccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccc
Confidence 9999988 777777766 66 888888888888 5666666654 788888888888887777777
Q ss_pred --CCCCCCEEeCCCCcCCCCCChhh-h--cCCCEEEeccCCCCCCcCcc
Q 048796 204 --KLGALEYLDLSGNQFKGEIPDKL-S--LKLNEFNVSYNDLSGPIPEN 247 (555)
Q Consensus 204 --~l~~L~~L~Ls~N~l~~~~p~~~-~--~~L~~L~ls~N~l~~~~p~~ 247 (555)
.+++|+.|+|++|.++ .+|..+ . ++|+.|++++|.++ .+|..
T Consensus 429 ~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~ 475 (636)
T 4eco_A 429 PFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKN 475 (636)
T ss_dssp CCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSS
T ss_pred cccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHH
Confidence 6778888888888888 444433 2 67888888888887 55543
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.5e-26 Score=247.63 Aligned_cols=223 Identities=21% Similarity=0.183 Sum_probs=118.2
Q ss_pred CCCCCCEEECCCCcCCCCCCC-CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCC--CCccccCCCCccEE
Q 048796 6 NSTTLSVLNLSSNSLSGTLPT-SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGS--LPNLTSQFDRLSTF 82 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L 82 (555)
++++|++|++++|.+ +.+|. .+++|++|++++|...+.. .+..+++|++|+|++|.+++. .+..+..+++|++|
T Consensus 305 ~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L 381 (606)
T 3vq2_A 305 KHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHL 381 (606)
T ss_dssp TTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEE
T ss_pred ccccCCEEEcccccC-cccccCCCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEe
Confidence 455677777777777 34443 3445556666665333221 233445555555555555533 24455555555555
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCc-hhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcC
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIP-DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPME 161 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~ 161 (555)
+|++|.+++ +|..+..+++|+.|++++|++.+..+ ..+..+++|+.|++++|.+.+..|..+..+ ++|+
T Consensus 382 ~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---------~~L~ 451 (606)
T 3vq2_A 382 DLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGL---------TSLN 451 (606)
T ss_dssp ECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTC---------TTCC
T ss_pred ECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCC---------CCCC
Confidence 555555553 33445555555555555555554444 345555555555555555555554444443 5555
Q ss_pred EEEccCCcCCC-cCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccC
Q 048796 162 SLDLSGNALTG-VLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYN 238 (555)
Q Consensus 162 ~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N 238 (555)
+|+|++|.+++ .+|..|..+++|+.|+|++|.+++..|..+..+++|+.|++++|++++..|..+. ++|+.|++++|
T Consensus 452 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 531 (606)
T 3vq2_A 452 TLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFN 531 (606)
T ss_dssp EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTS
T ss_pred EEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCC
Confidence 55555555554 2444555555555555555555555555555555555555555555554444443 44555555555
Q ss_pred CCC
Q 048796 239 DLS 241 (555)
Q Consensus 239 ~l~ 241 (555)
+++
T Consensus 532 ~l~ 534 (606)
T 3vq2_A 532 RIE 534 (606)
T ss_dssp CCC
T ss_pred cCc
Confidence 555
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.93 E-value=9e-25 Score=213.67 Aligned_cols=206 Identities=23% Similarity=0.222 Sum_probs=183.1
Q ss_pred CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEE
Q 048796 28 LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLD 107 (555)
Q Consensus 28 l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 107 (555)
..+.+.+++++++++.++.... ++|++|+|++|.+++..+..|..+++|++|+|++|.|+...+..|..+++|++|+
T Consensus 15 ~~~~~~l~~~~~~l~~ip~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~ 91 (270)
T 2o6q_A 15 NNNKNSVDCSSKKLTAIPSNIP---ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLW 91 (270)
T ss_dssp ETTTTEEECTTSCCSSCCSCCC---TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEE
T ss_pred CCCCCEEEccCCCCCccCCCCC---CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEE
Confidence 3467899999999997765443 4799999999999987778999999999999999999977777889999999999
Q ss_pred cCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCcccccee
Q 048796 108 VSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLL 187 (555)
Q Consensus 108 L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 187 (555)
|++|++++..+..|..+++|+.|+|++|.+++..+..+..+ ++|++|+|++|.+++..+..|..+++|+.|
T Consensus 92 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---------~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 162 (270)
T 2o6q_A 92 VTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSL---------TKLTYLSLGYNELQSLPKGVFDKLTSLKEL 162 (270)
T ss_dssp CCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTC---------TTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcC---------cCCCEEECCCCcCCccCHhHccCCccccee
Confidence 99999997777788899999999999999998777666666 999999999999998877789999999999
Q ss_pred ecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcC
Q 048796 188 NLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 188 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p 245 (555)
+|++|.+++..+..|..+++|+.|+|++|++++..+..+. ++|+.|++++|++.|.++
T Consensus 163 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 163 RLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred EecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 9999999988778899999999999999999976665555 789999999999988654
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-25 Score=244.44 Aligned_cols=237 Identities=20% Similarity=0.226 Sum_probs=203.8
Q ss_pred CCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCC-cccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 8 TTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDI-SDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~-~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
++|+.|+|++|++++..|.. +++|++|+|++|.+++.. ...+..+++|++|+|++|.+.+..+..|..+++|+.|+
T Consensus 381 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ 460 (680)
T 1ziw_A 381 SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLM 460 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEE
T ss_pred CcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccch
Confidence 57888888888888776654 568899999999998644 46788889999999999999988899999999999999
Q ss_pred eeCCcCC--CCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcC
Q 048796 84 IRNNSVT--GTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPME 161 (555)
Q Consensus 84 L~~N~l~--~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~ 161 (555)
+++|.+. +..|..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+++..+..+... ....+..+++|+
T Consensus 461 l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~~~~~~~l~~L~ 539 (680)
T 1ziw_A 461 LRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGG-PIYFLKGLSHLH 539 (680)
T ss_dssp CTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTS-CCCTTTTCTTCC
T ss_pred hccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCC-cchhhcCCCCCC
Confidence 9999987 5688899999999999999999998778889999999999999999986543322111 111244569999
Q ss_pred EEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh---cCCCEEEeccC
Q 048796 162 SLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS---LKLNEFNVSYN 238 (555)
Q Consensus 162 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~~L~~L~ls~N 238 (555)
+|+|++|.++...+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+. ++|+.+++++|
T Consensus 540 ~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N 619 (680)
T 1ziw_A 540 ILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFN 619 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTC
T ss_pred EEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCC
Confidence 999999999976667899999999999999999988778889999999999999999987777653 78999999999
Q ss_pred CCCCCcC
Q 048796 239 DLSGPIP 245 (555)
Q Consensus 239 ~l~~~~p 245 (555)
++.|.++
T Consensus 620 ~~~c~c~ 626 (680)
T 1ziw_A 620 PFDCTCE 626 (680)
T ss_dssp CCCBCCC
T ss_pred CcccCCc
Confidence 9999876
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-26 Score=231.79 Aligned_cols=226 Identities=21% Similarity=0.195 Sum_probs=142.0
Q ss_pred CCCCCEEECCCCcCCCCCCCCC-CCCCEEEcCCCcCCC-CCccccc-------CCCCccEEEccCCcCCCCCCccc--cC
Q 048796 7 STTLSVLNLSSNSLSGTLPTSL-KSCVILDLSRNMISG-DISDMQN-------WEANLEILDLSSNKLSGSLPNLT--SQ 75 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~~~l-~~L~~L~L~~N~l~~-~~~~~~~-------~~~~L~~L~Ls~N~l~~~~~~~~--~~ 75 (555)
.++|++|++++|.+ .+|..+ ..|+.|+|++|.++. ..+..+. .+++|++|+|++|.+++.+|..+ ..
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 119 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEAT 119 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHHHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCC
T ss_pred CCCceeEeeccccc--ccHHHHHHHHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhc
Confidence 34577777777777 455432 236667777777743 2222222 35567777777777776666654 67
Q ss_pred CCCccEEEeeCCcCCCCCchhccCC-----CCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccC--CcCcccc
Q 048796 76 FDRLSTFNIRNNSVTGTLPSLLEIS-----PRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAI--PLRSSHA 148 (555)
Q Consensus 76 l~~L~~L~L~~N~l~~~~~~~l~~l-----~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~--p~~~~~~ 148 (555)
+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..+..+..+++|+.|+|++|.+.+.+ +..+
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--- 195 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL--- 195 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHS---
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHH---
Confidence 77777777777777765 5555554 67777777777777666667777777777777777765431 1111
Q ss_pred ccccccCCCCCcCEEEccCCcCCCc---CCccccCccccceeecccccccCCCc-hhccCCCCCCEEeCCCCcCCCCCCh
Q 048796 149 SELLVLPSYPPMESLDLSGNALTGV---LPSDIGNMGRLRLLNLANNHLSGKMP-SELSKLGALEYLDLSGNQFKGEIPD 224 (555)
Q Consensus 149 ~~l~~l~~~~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~ 224 (555)
.+..+++|++|+|++|.|++. ....+..+++|+.|+|++|.|++..| ..+..+++|++|+|++|.|+ .+|.
T Consensus 196 ----~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~ 270 (312)
T 1wwl_A 196 ----CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPK 270 (312)
T ss_dssp ----CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCS
T ss_pred ----HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhh
Confidence 012236777777777777632 11233456677777777777776553 34555677777777777777 5555
Q ss_pred hhhcCCCEEEeccCCCCCC
Q 048796 225 KLSLKLNEFNVSYNDLSGP 243 (555)
Q Consensus 225 ~~~~~L~~L~ls~N~l~~~ 243 (555)
.+.++|+.||+++|+|++.
T Consensus 271 ~~~~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 271 GLPAKLSVLDLSYNRLDRN 289 (312)
T ss_dssp SCCSEEEEEECCSSCCCSC
T ss_pred hccCCceEEECCCCCCCCC
Confidence 5446677777777777765
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-25 Score=238.25 Aligned_cols=104 Identities=26% Similarity=0.264 Sum_probs=67.5
Q ss_pred CCCCEEECCCCcCCCCCC---CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLP---TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|.+++..| ..+++|++|+|++|+|++..+..+..+++|++|+|++|.|+ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 567777777777765544 34566677777777777666666666666777777777766 34433 5666777777
Q ss_pred eCCcCCC-CCchhccCCCCccEEEcCCCcCC
Q 048796 85 RNNSVTG-TLPSLLEISPRLVTLDVSSNQLK 114 (555)
Q Consensus 85 ~~N~l~~-~~~~~l~~l~~L~~L~L~~N~l~ 114 (555)
++|.+++ .+|..++.+++|++|+|++|+++
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~ 128 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLE 128 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCC
T ss_pred cCCccccccchhhhccCCcceEEEecCcccc
Confidence 7776665 35566666666666666666654
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.7e-25 Score=247.06 Aligned_cols=94 Identities=19% Similarity=0.217 Sum_probs=57.2
Q ss_pred CCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEe
Q 048796 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNV 235 (555)
Q Consensus 158 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l 235 (555)
++|+.|+|++|.+++..+..|..+++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..|..+. ++|+.|++
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 345 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEEC
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEEC
Confidence 4566666666666665566666666666666666666666666666666666666666666655555444 55666666
Q ss_pred ccCCCCCCcCccccCC
Q 048796 236 SYNDLSGPIPENLRNF 251 (555)
Q Consensus 236 s~N~l~~~~p~~l~~~ 251 (555)
++|.+.+..+..+..+
T Consensus 346 ~~N~i~~~~~~~~~~l 361 (844)
T 3j0a_A 346 QKNHIAIIQDQTFKFL 361 (844)
T ss_dssp CSCCCCCCCSSCSCSC
T ss_pred CCCCCCccChhhhcCC
Confidence 6666655544444433
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-25 Score=242.30 Aligned_cols=232 Identities=19% Similarity=0.118 Sum_probs=157.5
Q ss_pred CCCCCCEEECCCCcCCCCCC--CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 6 NSTTLSVLNLSSNSLSGTLP--TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
++++|+.|++++|.++. +| ..+++|++|++++|.+..+ +.. .+++|+.|++++|...+.. .+..+++|++|+
T Consensus 283 ~l~~L~~L~l~~~~~~~-l~~l~~~~~L~~L~l~~n~l~~l-p~~--~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 356 (606)
T 3vq2_A 283 CLANVSAMSLAGVSIKY-LEDVPKHFKWQSLSIIRCQLKQF-PTL--DLPFLKSLTLTMNKGSISF--KKVALPSLSYLD 356 (606)
T ss_dssp GGTTCSEEEEESCCCCC-CCCCCTTCCCSEEEEESCCCSSC-CCC--CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEE
T ss_pred cCCCCCEEEecCccchh-hhhccccccCCEEEcccccCccc-ccC--CCCccceeeccCCcCccch--hhccCCCCCEEE
Confidence 45677777777777753 33 2345677777777777433 333 5667777777777544333 456777777777
Q ss_pred eeCCcCCCC--CchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCC-cCccccccccccCCCCCc
Q 048796 84 IRNNSVTGT--LPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIP-LRSSHASELLVLPSYPPM 160 (555)
Q Consensus 84 L~~N~l~~~--~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~~~~l~~l~~~~~L 160 (555)
|++|.+++. .+..+..+++|++|++++|.++ .+|..+..+++|+.|++++|.+.+..+ ..+..+ ++|
T Consensus 357 ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l---------~~L 426 (606)
T 3vq2_A 357 LSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSL---------EKL 426 (606)
T ss_dssp CCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTC---------TTC
T ss_pred CcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhcc---------ccC
Confidence 777777654 3666777777777777777776 355667777777777777777776655 344444 677
Q ss_pred CEEEccCCcCCCcCCccccCccccceeecccccccC-CCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEecc
Q 048796 161 ESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSG-KMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSY 237 (555)
Q Consensus 161 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~ 237 (555)
++|++++|.+++..|..+..+++|+.|++++|.+++ .+|..+..+++|+.|++++|.+++..|..+. ++|+.|++++
T Consensus 427 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 506 (606)
T 3vq2_A 427 LYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSH 506 (606)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCC
Confidence 777777777777777777777777777777777776 3566677777777777777777766666555 6777777777
Q ss_pred CCCCCCcCccccCCCC
Q 048796 238 NDLSGPIPENLRNFPK 253 (555)
Q Consensus 238 N~l~~~~p~~l~~~~~ 253 (555)
|++++..|..+..++.
T Consensus 507 N~l~~~~~~~~~~l~~ 522 (606)
T 3vq2_A 507 NNLLFLDSSHYNQLYS 522 (606)
T ss_dssp SCCSCEEGGGTTTCTT
T ss_pred CcCCCcCHHHccCCCc
Confidence 7777776766655543
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-24 Score=213.43 Aligned_cols=201 Identities=25% Similarity=0.229 Sum_probs=105.6
Q ss_pred CCCCCCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEee
Q 048796 6 NSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIR 85 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 85 (555)
++++|+++++++|+|+...+...+++++|+|++|+|++..+..+..+++|+.|+|++|.|++..+. ..+++|++|+|+
T Consensus 8 ~l~~l~~l~~~~~~l~~ip~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls 85 (290)
T 1p9a_G 8 KVASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLS 85 (290)
T ss_dssp CSTTCCEEECTTSCCSSCCSCCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECC
T ss_pred ccCCccEEECCCCCCCcCCCCCCCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEECC
Confidence 455666666666666632222234556666666666555555555555566666666655532221 445555555555
Q ss_pred CCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEc
Q 048796 86 NNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDL 165 (555)
Q Consensus 86 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~L 165 (555)
+|.|+ .+|..+..+++|+.|+|++|+|++..+..|..++ +|++|+|
T Consensus 86 ~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~---------------------------------~L~~L~L 131 (290)
T 1p9a_G 86 HNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG---------------------------------ELQELYL 131 (290)
T ss_dssp SSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCT---------------------------------TCCEEEC
T ss_pred CCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCC---------------------------------CCCEEEC
Confidence 55555 3344444555555555555555543334444444 4455555
Q ss_pred cCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCC
Q 048796 166 SGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGP 243 (555)
Q Consensus 166 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~ 243 (555)
++|.|++..+..|..+++|+.|+|++|+|+...+..|..+++|+.|+|++|+|+ .+|..+. .+|+.+++++|++.|.
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 555555444444555555555555555555444444455555555555555555 3333333 4566666666666553
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=233.10 Aligned_cols=236 Identities=19% Similarity=0.206 Sum_probs=173.2
Q ss_pred cCCCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCC-CCCccccCCCCcc
Q 048796 5 INSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSG-SLPNLTSQFDRLS 80 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~ 80 (555)
.++++|++|+|++|+|++..|+ .+++|++|+|++|+|+.++.. .+++|++|+|++|.+++ .+|..|+.+++|+
T Consensus 42 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~ 118 (520)
T 2z7x_B 42 LSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH---PTVNLKHLDLSFNAFDALPICKEFGNMSQLK 118 (520)
T ss_dssp TTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC---CCCCCSEEECCSSCCSSCCCCGGGGGCTTCC
T ss_pred cccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc---ccCCccEEeccCCccccccchhhhccCCcce
Confidence 3567788888888887766553 355677778887777754433 55677777777777775 3566777777777
Q ss_pred EEEeeCCcCC-------------------------CCCchhccCC-----------------------------------
Q 048796 81 TFNIRNNSVT-------------------------GTLPSLLEIS----------------------------------- 100 (555)
Q Consensus 81 ~L~L~~N~l~-------------------------~~~~~~l~~l----------------------------------- 100 (555)
+|+|++|.++ +..|..+..+
T Consensus 119 ~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 198 (520)
T 2z7x_B 119 FLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIK 198 (520)
T ss_dssp EEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEE
T ss_pred EEEecCcccchhhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeecccc
Confidence 7777766653 2223333321
Q ss_pred ------------------------------------------------CCccEEEcCCCcCCCCCchhh-----------
Q 048796 101 ------------------------------------------------PRLVTLDVSSNQLKGPIPDNF----------- 121 (555)
Q Consensus 101 ------------------------------------------------~~L~~L~L~~N~l~~~~~~~~----------- 121 (555)
++|++|++++|++++.+|..+
T Consensus 199 ~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L 278 (520)
T 2z7x_B 199 CVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKAL 278 (520)
T ss_dssp ECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEE
T ss_pred ccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCcee
Confidence 156667777776665555443
Q ss_pred ------------------------------------------hCCCCCCeEEccCCcccccCCcCccccccccccCCCCC
Q 048796 122 ------------------------------------------FSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPP 159 (555)
Q Consensus 122 ------------------------------------------~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~ 159 (555)
..+++|+.|++++|.+++.+|..+..+ ++
T Consensus 279 ~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l---------~~ 349 (520)
T 2z7x_B 279 SIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHL---------TE 349 (520)
T ss_dssp EEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCC---------SS
T ss_pred EeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccC---------CC
Confidence 567889999999999998888777666 88
Q ss_pred cCEEEccCCcCCC--cCCccccCccccceeecccccccCCCch-hccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEec
Q 048796 160 MESLDLSGNALTG--VLPSDIGNMGRLRLLNLANNHLSGKMPS-ELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVS 236 (555)
Q Consensus 160 L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls 236 (555)
|++|+|++|.+++ .+|..+..+++|+.|+|++|.+++.+|. .+..+++|+.|++++|.+++..|..+.++|+.|+++
T Consensus 350 L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls 429 (520)
T 2z7x_B 350 LETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLH 429 (520)
T ss_dssp CCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEEECC
T ss_pred CCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEEECC
Confidence 9999999999986 4556788999999999999999874554 478889999999999999887777666789999999
Q ss_pred cCCCCCCcCccccCCCC
Q 048796 237 YNDLSGPIPENLRNFPK 253 (555)
Q Consensus 237 ~N~l~~~~p~~l~~~~~ 253 (555)
+|.++ .+|..+..++.
T Consensus 430 ~N~l~-~ip~~~~~l~~ 445 (520)
T 2z7x_B 430 SNKIK-SIPKQVVKLEA 445 (520)
T ss_dssp SSCCC-CCCGGGGGCTT
T ss_pred CCccc-ccchhhhcCCC
Confidence 99998 67776555544
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=9.1e-25 Score=214.30 Aligned_cols=209 Identities=23% Similarity=0.219 Sum_probs=182.5
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|++++..+. .+++|++|+|++|+++++.+..+..+++|++|+|++|.+++..+..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 4699999999999976554 4678999999999999888888899999999999999999888889999999999999
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCCC-CchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcC-E
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKGP-IPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPME-S 162 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~-~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~-~ 162 (555)
++|.+.+..+..+..+++|++|+|++|++++. +|..+..+++|+.|+|++|.+++..+..+..+.. ++.|. .
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~------L~~l~l~ 181 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQ------MPLLNLS 181 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHT------CTTCCEE
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhh------cccccee
Confidence 99999987777899999999999999999864 5899999999999999999999877666665522 23343 8
Q ss_pred EEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCC
Q 048796 163 LDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIP 223 (555)
Q Consensus 163 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 223 (555)
|++++|.+++..+..+.. .+|+.|+|++|.|++..+..+..+++|+.|++++|++++..+
T Consensus 182 L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 182 LDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp EECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred eecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 999999999776666654 489999999999998777778999999999999999998765
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.3e-26 Score=252.81 Aligned_cols=229 Identities=19% Similarity=0.300 Sum_probs=155.4
Q ss_pred CCcCC---CCCCEEECCCCcCCCCCCCC---CCCCCEEEc-CCCcCCCC-------------------------------
Q 048796 3 HGINS---TTLSVLNLSSNSLSGTLPTS---LKSCVILDL-SRNMISGD------------------------------- 44 (555)
Q Consensus 3 ~~~n~---~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L-~~N~l~~~------------------------------- 44 (555)
.|+.| ..++.|+|++|+|.|.+|.. +++|++|+| ++|.+++.
T Consensus 315 ~GV~C~~~~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~ 394 (876)
T 4ecn_A 315 PGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDY 394 (876)
T ss_dssp TTEEECTTSCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCC
T ss_pred CceEecCCCCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhcc
Confidence 44555 46999999999999988865 667889999 77765433
Q ss_pred ---------------------------------------------CcccccCCCCccEEEccCCcCCC------------
Q 048796 45 ---------------------------------------------ISDMQNWEANLEILDLSSNKLSG------------ 67 (555)
Q Consensus 45 ---------------------------------------------~~~~~~~~~~L~~L~Ls~N~l~~------------ 67 (555)
+|..+..+++|+.|+|++|.|++
T Consensus 395 ~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~ 474 (876)
T 4ecn_A 395 DQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANS 474 (876)
T ss_dssp CGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTS
T ss_pred CcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCccccccccccc
Confidence 33345556667777777777776
Q ss_pred -----CCCcccc--CCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCc-CCC-CCchhhhCCC-------CCCeEE
Q 048796 68 -----SLPNLTS--QFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ-LKG-PIPDNFFSSM-------ALTNLN 131 (555)
Q Consensus 68 -----~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~-~~~~~~~~~~-------~L~~L~ 131 (555)
.+|..++ ++++|++|+|++|.+.+.+|..+..+++|+.|+|++|+ +++ .+|..++.+. +|+.|+
T Consensus 475 n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~ 554 (876)
T 4ecn_A 475 DYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFY 554 (876)
T ss_dssp HHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEE
T ss_pred ccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEE
Confidence 2666655 77777777777777776777777777777777777776 665 5666555444 777777
Q ss_pred ccCCcccccCCc--CccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCC-C
Q 048796 132 LSGNGFSGAIPL--RSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGA-L 208 (555)
Q Consensus 132 Ls~N~l~~~~p~--~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L 208 (555)
|++|.++ .+|. .+..+ ++|+.|+|++|.++ .+| .|..+++|+.|+|++|.++ .+|..+..+++ |
T Consensus 555 Ls~N~L~-~ip~~~~l~~L---------~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L 621 (876)
T 4ecn_A 555 MGYNNLE-EFPASASLQKM---------VKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQV 621 (876)
T ss_dssp CCSSCCC-BCCCHHHHTTC---------TTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTC
T ss_pred eeCCcCC-ccCChhhhhcC---------CCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccC
Confidence 7777776 5555 45544 66777777777776 555 6667777777777777776 56666666666 7
Q ss_pred CEEeCCCCcCCCCCChhhh----cCCCEEEeccCCCCCCcC
Q 048796 209 EYLDLSGNQFKGEIPDKLS----LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 209 ~~L~Ls~N~l~~~~p~~~~----~~L~~L~ls~N~l~~~~p 245 (555)
+.|+|++|.|+ .+|..+. .+|+.|++++|++++.+|
T Consensus 622 ~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip 661 (876)
T 4ecn_A 622 EGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGR 661 (876)
T ss_dssp CEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSS
T ss_pred CEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccc
Confidence 77777777776 5555443 236677777777766554
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.5e-25 Score=236.56 Aligned_cols=105 Identities=23% Similarity=0.238 Sum_probs=77.1
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|.|++..+. .+++|++|+|++|+|+++.+..+..+++|++|+|++|.|+ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 5788888888888766553 3557778888888888777777777777888888888877 44544 6777888888
Q ss_pred eCCcCCCC-CchhccCCCCccEEEcCCCcCCC
Q 048796 85 RNNSVTGT-LPSLLEISPRLVTLDVSSNQLKG 115 (555)
Q Consensus 85 ~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~ 115 (555)
++|++++. .|..|..+++|++|+|++|++++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT
T ss_pred CCCCccccCchHhhcccCcccEEecCCCcccc
Confidence 88877753 45677777777777777777754
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-25 Score=238.72 Aligned_cols=211 Identities=20% Similarity=0.216 Sum_probs=122.0
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|.|++..|. .+++|++|+|++|.|++..+ +..+++|++|+|++|.|++.. ..++|++|+|
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEEC
Confidence 3566666666666655443 34456666666666655443 555556666666666665322 1256666666
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcc-ccccccccCCCCCcCEE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSS-HASELLVLPSYPPMESL 163 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~-~~~~l~~l~~~~~L~~L 163 (555)
++|.|++..+. .+++|+.|+|++|.+++..|..+..+++|+.|+|++|.+++..|..+. .+ ++|+.|
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l---------~~L~~L 174 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASS---------DTLEHL 174 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGT---------TTCCEE
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhC---------CcccEE
Confidence 66666654433 235566666666666655555666666666666666666655554443 23 566666
Q ss_pred EccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCC
Q 048796 164 DLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLS 241 (555)
Q Consensus 164 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~ 241 (555)
+|++|.|++.. .+..+++|+.|+|++|.|++..+ .+..+++|+.|+|++|.|++ +|..+. ++|+.|++++|++.
T Consensus 175 ~Ls~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 175 NLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp ECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred ecCCCcccccc--ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 66666666542 23345666666666666665333 35566666666666666664 343333 45666666666665
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=212.63 Aligned_cols=199 Identities=24% Similarity=0.239 Sum_probs=142.9
Q ss_pred CCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeE
Q 048796 51 WEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNL 130 (555)
Q Consensus 51 ~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L 130 (555)
.+++|+.+++++|.++ .+|..+. ++|+.|+|++|.|++..+..|..+++|+.|+|++|.|++. +. ...+++|+.|
T Consensus 8 ~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L 82 (290)
T 1p9a_G 8 KVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QV-DGTLPVLGTL 82 (290)
T ss_dssp CSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-EC-CSCCTTCCEE
T ss_pred ccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cC-CCCCCcCCEE
Confidence 3445666666666666 3333332 4566666666666666666666677777777777776632 22 2566777777
Q ss_pred EccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCE
Q 048796 131 NLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEY 210 (555)
Q Consensus 131 ~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 210 (555)
+|++|.++ .+|..+..+ ++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.
T Consensus 83 ~Ls~N~l~-~l~~~~~~l---------~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 152 (290)
T 1p9a_G 83 DLSHNQLQ-SLPLLGQTL---------PALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK 152 (290)
T ss_dssp ECCSSCCS-SCCCCTTTC---------TTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred ECCCCcCC-cCchhhccC---------CCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCE
Confidence 77777776 445444444 88899999999999888888999999999999999999888888899999999
Q ss_pred EeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccCCCCCC--CCCCCccccc
Q 048796 211 LDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNFPKSS--FHPGNALLIF 265 (555)
Q Consensus 211 L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~~~~~--~~~~n~~~~~ 265 (555)
|+|++|+|+...+..+. ++|+.|++++|+++ .+|..+....... ...+|++.|.
T Consensus 153 L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 153 LSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp EECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred EECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 99999999966655554 79999999999999 5666554443322 1236766553
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.2e-25 Score=237.94 Aligned_cols=233 Identities=18% Similarity=0.163 Sum_probs=165.0
Q ss_pred cCCCCCCEEECCCCcCCCCCCCCCC--CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 5 INSTTLSVLNLSSNSLSGTLPTSLK--SCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
.++++|++|++++|.+++ +|..+. +|++|++++|.+...+. ..+++|+.|++++|.+.+..+. ..+++|++|
T Consensus 279 ~~l~~L~~L~l~~~~l~~-l~~~~~~~~L~~L~l~~n~~~~l~~---~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L 352 (570)
T 2z63_A 279 NCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFL 352 (570)
T ss_dssp GGGTTCSEEEEESCEECS-CCBCCSCCCCSEEEEESCBCSSCCB---CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEE
T ss_pred cCcCcccEEEecCccchh-hhhhhccCCccEEeeccCcccccCc---ccccccCEEeCcCCcccccccc--ccCCCCCEE
Confidence 356788999999988874 554322 78888888888875543 2455688888888877755544 667778888
Q ss_pred EeeCCcCCCCC--chhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCC-cCccccccccccCCCCC
Q 048796 83 NIRNNSVTGTL--PSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIP-LRSSHASELLVLPSYPP 159 (555)
Q Consensus 83 ~L~~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~~~~l~~l~~~~~ 159 (555)
++++|.+++.. +..+..+++|+.|++++|.+.+. +..+..+++|+.|++++|.+.+..+ ..+..+ ++
T Consensus 353 ~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l---------~~ 422 (570)
T 2z63_A 353 DLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL---------RN 422 (570)
T ss_dssp ECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEEEETCTTCCEEECTTSEEESCTTSCTTTTC---------TT
T ss_pred eCcCCccCccccccccccccCccCEEECCCCccccc-cccccccCCCCEEEccCCccccccchhhhhcC---------CC
Confidence 88888777543 56677777888888888877643 3347777788888888887776544 233333 77
Q ss_pred cCEEEccCCcCCCcCCccccCccccceeeccccccc-CCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEec
Q 048796 160 MESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLS-GKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVS 236 (555)
Q Consensus 160 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls 236 (555)
|++|++++|.+++..|..|..+++|+.|+|++|.++ +.+|..+..+++|+.|++++|++++..|..+. ++|+.|+++
T Consensus 423 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 502 (570)
T 2z63_A 423 LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMA 502 (570)
T ss_dssp CCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCC
Confidence 777777777777777777777777777777777776 45667777777777777777777776666655 677777777
Q ss_pred cCCCCCCcCccccCCCC
Q 048796 237 YNDLSGPIPENLRNFPK 253 (555)
Q Consensus 237 ~N~l~~~~p~~l~~~~~ 253 (555)
+|++++..|..+..++.
T Consensus 503 ~n~l~~~~~~~~~~l~~ 519 (570)
T 2z63_A 503 SNQLKSVPDGIFDRLTS 519 (570)
T ss_dssp SSCCSCCCTTTTTTCTT
T ss_pred CCcCCCCCHHHhhcccC
Confidence 77777766665555544
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-25 Score=224.75 Aligned_cols=221 Identities=19% Similarity=0.219 Sum_probs=169.1
Q ss_pred CCCCCEEECCCCcCCCCCC---CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 7 STTLSVLNLSSNSLSGTLP---TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
+++|++|+|++|+|++..| ..+++|++|+|++|++++..+ +..+++|++|+|++|.+++.. ..++|++|+
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~ 105 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLH 105 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEE
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEE
Confidence 4578899999998887665 356788899999998876654 677788999999999887432 347888999
Q ss_pred eeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcc-ccccccccCCCCCcCE
Q 048796 84 IRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSS-HASELLVLPSYPPMES 162 (555)
Q Consensus 84 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~-~~~~l~~l~~~~~L~~ 162 (555)
+++|.+++..+.. +++|++|++++|++++..+..+..+++|+.|+|++|.+++..+..+. .+ ++|++
T Consensus 106 l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l---------~~L~~ 173 (317)
T 3o53_A 106 AANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASS---------DTLEH 173 (317)
T ss_dssp CCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGT---------TTCCE
T ss_pred CCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhcc---------CcCCE
Confidence 9999888655433 57789999999998876677788888899999999988876655543 33 78899
Q ss_pred EEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCC
Q 048796 163 LDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDL 240 (555)
Q Consensus 163 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l 240 (555)
|+|++|.+++. .....+++|+.|+|++|.|++.. ..+..+++|+.|+|++|+|+ .+|..+. ++|+.|++++|++
T Consensus 174 L~L~~N~l~~~--~~~~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~ 249 (317)
T 3o53_A 174 LNLQYNFIYDV--KGQVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGF 249 (317)
T ss_dssp EECTTSCCCEE--ECCCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCC
T ss_pred EECCCCcCccc--ccccccccCCEEECCCCcCCcch-hhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCc
Confidence 99999998865 23345788999999999988644 45888889999999999888 4555554 6889999999998
Q ss_pred C-CCcCccccC
Q 048796 241 S-GPIPENLRN 250 (555)
Q Consensus 241 ~-~~~p~~l~~ 250 (555)
. +.+|..+..
T Consensus 250 ~~~~~~~~~~~ 260 (317)
T 3o53_A 250 HCGTLRDFFSK 260 (317)
T ss_dssp BHHHHHHHHHT
T ss_pred cCcCHHHHHhc
Confidence 8 444544433
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.9e-24 Score=232.95 Aligned_cols=262 Identities=20% Similarity=0.233 Sum_probs=198.2
Q ss_pred CcCCCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCcc
Q 048796 4 GINSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLS 80 (555)
Q Consensus 4 ~~n~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 80 (555)
..++++|++|+|++|+|+++.++. +++|++|+|++|+|+++++..|..+++|++|+|++|+|++..+..|+++++|+
T Consensus 72 f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~ 151 (635)
T 4g8a_A 72 FFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLK 151 (635)
T ss_dssp TTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCC
T ss_pred HhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccC
Confidence 357899999999999999776654 56889999999999999989999999999999999999987778899999999
Q ss_pred EEEeeCCcCCCC-CchhccCCCCccEEEcCCCcCCCCCchhhhCC-----------------------------------
Q 048796 81 TFNIRNNSVTGT-LPSLLEISPRLVTLDVSSNQLKGPIPDNFFSS----------------------------------- 124 (555)
Q Consensus 81 ~L~L~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~----------------------------------- 124 (555)
+|+|++|.++.. .|..+..+++|++|+|++|+|++..+..+..+
T Consensus 152 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l 231 (635)
T 4g8a_A 152 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTL 231 (635)
T ss_dssp EEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEE
T ss_pred eeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhh
Confidence 999999999764 67888999999999999998864433222110
Q ss_pred --------------------------------------------------------------------------------
Q 048796 125 -------------------------------------------------------------------------------- 124 (555)
Q Consensus 125 -------------------------------------------------------------------------------- 124 (555)
T Consensus 232 ~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l 311 (635)
T 4g8a_A 232 RNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSF 311 (635)
T ss_dssp ESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEE
T ss_pred hcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccc
Confidence
Q ss_pred ----------------CCCCeEEccCCcccccCCcC--------------------------------------------
Q 048796 125 ----------------MALTNLNLSGNGFSGAIPLR-------------------------------------------- 144 (555)
Q Consensus 125 ----------------~~L~~L~Ls~N~l~~~~p~~-------------------------------------------- 144 (555)
..|+.|++.+|.+....+..
T Consensus 312 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~ 391 (635)
T 4g8a_A 312 SLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQ 391 (635)
T ss_dssp EEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCH
T ss_pred cccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhcccccccccccc
Confidence 11222333222221110000
Q ss_pred ------------------------ccccccc----------------c------------------------ccCCCCCc
Q 048796 145 ------------------------SSHASEL----------------L------------------------VLPSYPPM 160 (555)
Q Consensus 145 ------------------------~~~~~~l----------------~------------------------~l~~~~~L 160 (555)
+..+..+ . .+..++.|
T Consensus 392 ~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L 471 (635)
T 4g8a_A 392 SDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL 471 (635)
T ss_dssp HHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC
T ss_pred chhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhh
Confidence 0000000 0 01134567
Q ss_pred CEEEccCCcC-CCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEecc
Q 048796 161 ESLDLSGNAL-TGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSY 237 (555)
Q Consensus 161 ~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~ 237 (555)
+.|+|++|.+ .+..|..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..+. ++|+.||+++
T Consensus 472 ~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~ 551 (635)
T 4g8a_A 472 EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSL 551 (635)
T ss_dssp CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTT
T ss_pred hhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCC
Confidence 7788888764 345677889999999999999999999999999999999999999999988888776 7999999999
Q ss_pred CCCCCCcCccccCCCC-CC--CCCCCccccc
Q 048796 238 NDLSGPIPENLRNFPK-SS--FHPGNALLIF 265 (555)
Q Consensus 238 N~l~~~~p~~l~~~~~-~~--~~~~n~~~~~ 265 (555)
|+|++..|..+..++. .. ...+|++.|.
T Consensus 552 N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 552 NHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp SCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 9999999988876642 22 1237777664
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-24 Score=233.32 Aligned_cols=239 Identities=21% Similarity=0.177 Sum_probs=188.2
Q ss_pred CcCCCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCC-CCccccCCCCc
Q 048796 4 GINSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGS-LPNLTSQFDRL 79 (555)
Q Consensus 4 ~~n~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~-~~~~~~~l~~L 79 (555)
..++++|++|+|++|+|++..|+. +++|++|+|++|+|+.++.. .+++|++|+|++|.+++. +|..|+++++|
T Consensus 72 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L 148 (562)
T 3a79_B 72 ISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKL 148 (562)
T ss_dssp TTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTC
T ss_pred hccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc---ccccCCEEECCCCCccccCchHhhcccCcc
Confidence 357889999999999999877765 56789999999999976554 678899999999999963 46899999999
Q ss_pred cEEEeeCCcCCCCCchhccCCCCc--cEEEcCCCcC--CCCCchhhhCCC------------------------------
Q 048796 80 STFNIRNNSVTGTLPSLLEISPRL--VTLDVSSNQL--KGPIPDNFFSSM------------------------------ 125 (555)
Q Consensus 80 ~~L~L~~N~l~~~~~~~l~~l~~L--~~L~L~~N~l--~~~~~~~~~~~~------------------------------ 125 (555)
++|+|++|.+++. .+..+++| +.|+|++|.+ ++..|..+..+.
T Consensus 149 ~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~ 225 (562)
T 3a79_B 149 TFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQL 225 (562)
T ss_dssp CEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEE
T ss_pred cEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEE
Confidence 9999999999864 34444555 9999999988 655555544432
Q ss_pred ---------------------------------------------------CCCeEEccCCcccccCCcCc-----cccc
Q 048796 126 ---------------------------------------------------ALTNLNLSGNGFSGAIPLRS-----SHAS 149 (555)
Q Consensus 126 ---------------------------------------------------~L~~L~Ls~N~l~~~~p~~~-----~~~~ 149 (555)
+|++|++++|.+.+.+|..+ ..+.
T Consensus 226 L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~ 305 (562)
T 3a79_B 226 SNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALK 305 (562)
T ss_dssp EEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCC
T ss_pred ecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccch
Confidence 67888888888888887765 2222
Q ss_pred cccc---------------------------------------cCCCCCcCEEEccCCcCCCcCCccccCccccceeecc
Q 048796 150 ELLV---------------------------------------LPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLA 190 (555)
Q Consensus 150 ~l~~---------------------------------------l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 190 (555)
.+.. ...+++|++|+|++|.+++..|..+..+++|+.|+|+
T Consensus 306 ~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 385 (562)
T 3a79_B 306 SLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQ 385 (562)
T ss_dssp EEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECC
T ss_pred heehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECC
Confidence 1110 1466889999999999998888899999999999999
Q ss_pred cccccCC--CchhccCCCCCCEEeCCCCcCCCCCChh-hh--cCCCEEEeccCCCCCCcCccc
Q 048796 191 NNHLSGK--MPSELSKLGALEYLDLSGNQFKGEIPDK-LS--LKLNEFNVSYNDLSGPIPENL 248 (555)
Q Consensus 191 ~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~--~~L~~L~ls~N~l~~~~p~~l 248 (555)
+|++++. +|..+..+++|+.|++++|.+++.+|.. +. ++|+.|++++|.+++.+|..+
T Consensus 386 ~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 448 (562)
T 3a79_B 386 RNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCL 448 (562)
T ss_dssp SSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSC
T ss_pred CCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhh
Confidence 9999863 3466888999999999999999756654 32 678888888888887766554
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=235.30 Aligned_cols=165 Identities=20% Similarity=0.175 Sum_probs=119.0
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|++++..|. .+++|++|+|++|+|++..+..+..+++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 5788888888888766554 3557778888888888777777777778888888888888766666788888888888
Q ss_pred eCCcCCCC-CchhccCCCCccEEEcCCCcCCCCCc-hhhhCCCCCCeEEccCCcccccCCcCcccccccccc--------
Q 048796 85 RNNSVTGT-LPSLLEISPRLVTLDVSSNQLKGPIP-DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVL-------- 154 (555)
Q Consensus 85 ~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l-------- 154 (555)
++|.+++. .+..+..+++|++|++++|.+.+.++ ..+..+++|+.|++++|.+++..|..+..+..+..+
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc
Confidence 88888753 45677778888888888887443444 567777788888888888877777766655443322
Q ss_pred -------CCCCCcCEEEccCCcCCC
Q 048796 155 -------PSYPPMESLDLSGNALTG 172 (555)
Q Consensus 155 -------~~~~~L~~L~Ls~N~l~~ 172 (555)
..+++|++|++++|.+++
T Consensus 186 ~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 186 FLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp THHHHHHHSTTTBSEEEEESCBCTT
T ss_pred ccchhhHhhcccccEEEccCCcccc
Confidence 135666777777766665
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.3e-25 Score=219.00 Aligned_cols=220 Identities=20% Similarity=0.267 Sum_probs=177.0
Q ss_pred CCEEECCCCcCC-CCCCC----------CCCCCCEEEcCCCcCCCCCcccc--cCCCCccEEEccCCcCCCCCCccccCC
Q 048796 10 LSVLNLSSNSLS-GTLPT----------SLKSCVILDLSRNMISGDISDMQ--NWEANLEILDLSSNKLSGSLPNLTSQF 76 (555)
Q Consensus 10 L~~L~Ls~N~l~-~~~~~----------~l~~L~~L~L~~N~l~~~~~~~~--~~~~~L~~L~Ls~N~l~~~~~~~~~~l 76 (555)
|+.|+|++|+++ ..+|. .+++|++|+|++|++++..+..+ ..+++|++|+|++|.+++. |..+..+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 788899999985 34443 47899999999999987665543 7788999999999999976 7777776
Q ss_pred -----CCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCC--Cchhh--hCCCCCCeEEccCCccccc--CCcCc
Q 048796 77 -----DRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGP--IPDNF--FSSMALTNLNLSGNGFSGA--IPLRS 145 (555)
Q Consensus 77 -----~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~~~~~--~~~~~L~~L~Ls~N~l~~~--~p~~~ 145 (555)
++|++|+|++|++++..+..+..+++|++|+|++|++.+. .+..+ ..+++|+.|+|++|.+++. ++..
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~- 222 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSA- 222 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHH-
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHH-
Confidence 8999999999999988888999999999999999998754 23444 7889999999999998732 1111
Q ss_pred cccccccccCCCCCcCEEEccCCcCCCcCC-ccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCCh
Q 048796 146 SHASELLVLPSYPPMESLDLSGNALTGVLP-SDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPD 224 (555)
Q Consensus 146 ~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 224 (555)
.+..+++|++|+|++|.+++..| ..+..+++|+.|+|++|.|+ .+|..+. ++|++|||++|+|++. |.
T Consensus 223 -------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~ 291 (312)
T 1wwl_A 223 -------LAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS 291 (312)
T ss_dssp -------HHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC
T ss_pred -------HHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh
Confidence 11234889999999999998775 45667899999999999998 6777665 8899999999999976 55
Q ss_pred hhh--cCCCEEEeccCCCCCC
Q 048796 225 KLS--LKLNEFNVSYNDLSGP 243 (555)
Q Consensus 225 ~~~--~~L~~L~ls~N~l~~~ 243 (555)
+. ++|+.|++++|++++.
T Consensus 292 -~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 292 -PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp -TTTSCEEEEEECTTCTTTCC
T ss_pred -HhhCCCCCEEeccCCCCCCC
Confidence 43 7899999999999863
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-23 Score=234.71 Aligned_cols=231 Identities=19% Similarity=0.322 Sum_probs=134.0
Q ss_pred CCCCCEEECCCCcCCCCCCC-----CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCC-cc
Q 048796 7 STTLSVLNLSSNSLSGTLPT-----SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDR-LS 80 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~~-----~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~ 80 (555)
+++|++|+|++|+|+ .+|. .+++|+.|+|++|+|+. ++ .+..+++|+.|+|++|.++ .+|..+..+++ |+
T Consensus 547 l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~-lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~ 622 (876)
T 4ecn_A 547 GPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRH-LE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVE 622 (876)
T ss_dssp TTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCB-CC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCC
T ss_pred cCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCccc-ch-hhcCCCcceEEECcCCccc-cchHHHhhccccCC
Confidence 345666666666665 4444 34455666666666652 22 4555556666666666665 55555666665 66
Q ss_pred EEEeeCCcCCCCCchhccCCCC--ccEEEcCCCcCCCCCchh---hh--CCCCCCeEEccCCcccccCCcCccccccccc
Q 048796 81 TFNIRNNSVTGTLPSLLEISPR--LVTLDVSSNQLKGPIPDN---FF--SSMALTNLNLSGNGFSGAIPLRSSHASELLV 153 (555)
Q Consensus 81 ~L~L~~N~l~~~~~~~l~~l~~--L~~L~L~~N~l~~~~~~~---~~--~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~ 153 (555)
+|+|++|.|+ .+|..+..+.. |+.|+|++|++++.+|.. +. .+.+|+.|+|++|.++ .+|..+.
T Consensus 623 ~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~------- 693 (876)
T 4ecn_A 623 GLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELF------- 693 (876)
T ss_dssp EEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHH-------
T ss_pred EEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHH-------
Confidence 6666666665 44555544432 566666666655443321 11 2335666666666666 3333221
Q ss_pred cCCCCCcCEEEccCCcCCCcCCcc-cc-------CccccceeecccccccCCCchhcc--CCCCCCEEeCCCCcCCCCCC
Q 048796 154 LPSYPPMESLDLSGNALTGVLPSD-IG-------NMGRLRLLNLANNHLSGKMPSELS--KLGALEYLDLSGNQFKGEIP 223 (555)
Q Consensus 154 l~~~~~L~~L~Ls~N~l~~~~p~~-~~-------~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p 223 (555)
..+++|+.|+|++|.|+ .+|.. +. ++++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|
T Consensus 694 -~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp 769 (876)
T 4ecn_A 694 -ATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FP 769 (876)
T ss_dssp -HTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CC
T ss_pred -ccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cc
Confidence 12267777777777777 33333 22 2237777777777777 5666665 67777777777777776 55
Q ss_pred hhhh--cCCCEEEecc------CCCCCCcCccccCCCCC
Q 048796 224 DKLS--LKLNEFNVSY------NDLSGPIPENLRNFPKS 254 (555)
Q Consensus 224 ~~~~--~~L~~L~ls~------N~l~~~~p~~l~~~~~~ 254 (555)
..+. ++|+.|++++ |.+.+.+|..+..++..
T Consensus 770 ~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L 808 (876)
T 4ecn_A 770 TQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSL 808 (876)
T ss_dssp CGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSC
T ss_pred hhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCC
Confidence 5544 6677777755 66677777666555443
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-24 Score=211.72 Aligned_cols=205 Identities=18% Similarity=0.169 Sum_probs=181.7
Q ss_pred cCCCCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 5 INSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
.++++|+.|++++|.++.... ..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++..+..+..+++|++|+
T Consensus 38 ~~l~~L~~L~l~~~~i~~~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIKSVQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HHHTTCCEEECTTSCCCCCTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccccceeeeeeCCCCcccccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 356789999999999984321 4588999999999999875 3567788999999999999988888899999999999
Q ss_pred eeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEE
Q 048796 84 IRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESL 163 (555)
Q Consensus 84 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L 163 (555)
|++|++++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|.+++..+..+..+ ++|++|
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---------~~L~~L 186 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKL---------TQLKDL 186 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---------TTCCEE
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCC---------ccCCEE
Confidence 99999998888889999999999999999997777778899999999999999997777666665 899999
Q ss_pred EccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh
Q 048796 164 DLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS 227 (555)
Q Consensus 164 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 227 (555)
+|++|.+++..+..|..+++|+.|+|++|.+.+. +++|+.|++..|.++|.+|..+.
T Consensus 187 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 187 RLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTS
T ss_pred ECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccc
Confidence 9999999998888899999999999999998754 56799999999999999997654
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-23 Score=209.44 Aligned_cols=224 Identities=20% Similarity=0.262 Sum_probs=154.4
Q ss_pred cCCCCCCEEECCCCcCCCCCC--CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 5 INSTTLSVLNLSSNSLSGTLP--TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
.++++|++|+|++|.++.. + ..+++|++|+|++|.+++..+ +..+++|+.|++++|.....++ .+..+++|++|
T Consensus 85 ~~l~~L~~L~L~~n~i~~~-~~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L 160 (347)
T 4fmz_A 85 SNLVKLTNLYIGTNKITDI-SALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYL 160 (347)
T ss_dssp TTCTTCCEEECCSSCCCCC-GGGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEE
T ss_pred hcCCcCCEEEccCCcccCc-hHHcCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEE
Confidence 4678999999999999853 3 457889999999999987654 6677889999999996654443 47888889999
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCE
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMES 162 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~ 162 (555)
++++|.+.+..+ +..+++|+.|++++|.+.+. +. +..+++|+.|++++|.+.+..+ +..+ ++|++
T Consensus 161 ~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~---------~~L~~ 225 (347)
T 4fmz_A 161 TVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI-SP-LASLTSLHYFTAYVNQITDITP--VANM---------TRLNS 225 (347)
T ss_dssp ECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG--GGGC---------TTCCE
T ss_pred EecCCCcCCchh--hccCCCCCEEEccCCccccc-cc-ccCCCccceeecccCCCCCCch--hhcC---------CcCCE
Confidence 999988885544 77888888888888888743 33 7777888888888887775433 3333 56666
Q ss_pred EEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEeccCCCC
Q 048796 163 LDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSYNDLS 241 (555)
Q Consensus 163 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~N~l~ 241 (555)
|++++|.+++..+ +..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++. +.... ++|+.|++++|+++
T Consensus 226 L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 226 LKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp EECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCC
T ss_pred EEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCC
Confidence 6666666664432 56666666666666666642 3455666666666666666643 22111 56666666666666
Q ss_pred CCcCccccCCC
Q 048796 242 GPIPENLRNFP 252 (555)
Q Consensus 242 ~~~p~~l~~~~ 252 (555)
+..|..+..++
T Consensus 301 ~~~~~~l~~l~ 311 (347)
T 4fmz_A 301 NEDMEVIGGLT 311 (347)
T ss_dssp GGGHHHHHTCT
T ss_pred CcChhHhhccc
Confidence 55555444443
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-23 Score=210.55 Aligned_cols=219 Identities=22% Similarity=0.335 Sum_probs=183.1
Q ss_pred cCCCCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 5 INSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
.++++|++|+|++|.+++..+ ..+++|++|++++|......+. +..+++|++|++++|.+.+..+ +..+++|++|+
T Consensus 107 ~~l~~L~~L~l~~n~i~~~~~~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~ 183 (347)
T 4fmz_A 107 QNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLS 183 (347)
T ss_dssp TTCTTCSEEECTTSCCCCCGGGTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEE
T ss_pred cCCCcCCEEECcCCcccCchhhccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEE
Confidence 467899999999999986543 4678999999999966554444 6777889999999999985443 88999999999
Q ss_pred eeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEE
Q 048796 84 IRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESL 163 (555)
Q Consensus 84 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L 163 (555)
+++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+++..+ +.. +++|++|
T Consensus 184 l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~---------l~~L~~L 248 (347)
T 4fmz_A 184 LNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LAN---------LSQLTWL 248 (347)
T ss_dssp CTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTT---------CTTCCEE
T ss_pred ccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhc---------CCCCCEE
Confidence 99999986544 8889999999999999985444 8889999999999999985433 333 4899999
Q ss_pred EccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCC
Q 048796 164 DLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLS 241 (555)
Q Consensus 164 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~ 241 (555)
++++|.+++. ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..+. ++|+.|++++|+++
T Consensus 249 ~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 324 (347)
T 4fmz_A 249 EIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHIT 324 (347)
T ss_dssp ECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCC
T ss_pred ECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccc
Confidence 9999999864 5688899999999999999864 4688899999999999999987777766 78999999999999
Q ss_pred CCcC
Q 048796 242 GPIP 245 (555)
Q Consensus 242 ~~~p 245 (555)
+..|
T Consensus 325 ~~~~ 328 (347)
T 4fmz_A 325 DIRP 328 (347)
T ss_dssp CCGG
T ss_pred cccC
Confidence 8776
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.1e-23 Score=218.13 Aligned_cols=214 Identities=26% Similarity=0.334 Sum_probs=111.7
Q ss_pred CCCCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 6 NSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++++|++|++++|.+++... ..+++|++|++++|.+++..+ +..+++|+.|+|++|.+++. ..+..+++|++|++
T Consensus 175 ~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l 250 (466)
T 1o6v_A 175 NLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDL 250 (466)
T ss_dssp TCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred cCCCCCEEECcCCcCCCChhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEEC
Confidence 44555555555555553211 234555555555555554433 33344555555555555532 23455555555555
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~ 164 (555)
++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|+|++|.+.+..+ +.. +++|+.|+
T Consensus 251 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~---------l~~L~~L~ 315 (466)
T 1o6v_A 251 ANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN---------LKNLTYLT 315 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGG---------CTTCSEEE
T ss_pred CCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcC---------CCCCCEEE
Confidence 5555554433 5555555555555555553222 5555555555555555554322 222 25556666
Q ss_pred ccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCC
Q 048796 165 LSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSG 242 (555)
Q Consensus 165 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~ 242 (555)
|++|.+++..| +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..|..-.++|+.|++++|++++
T Consensus 316 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 316 LYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEEEEC
T ss_pred CcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCcccC
Confidence 66666655433 45555666666666665543 3455556666666666666555441111556666666666554
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-23 Score=201.49 Aligned_cols=159 Identities=24% Similarity=0.287 Sum_probs=102.4
Q ss_pred CccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEcc
Q 048796 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLS 133 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls 133 (555)
+|+.|+|++|.+++..+..|.++++|++|+|++|.|++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 45555555555555445555555555555555555555555555555556666666665554444455555666666666
Q ss_pred CCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeC
Q 048796 134 GNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDL 213 (555)
Q Consensus 134 ~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 213 (555)
+|.+++..+..+..+ ++|++|+|++|.|++..+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|
T Consensus 116 ~N~l~~~~~~~~~~l---------~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 186 (251)
T 3m19_A 116 GNQLKSLPSGVFDRL---------TKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITL 186 (251)
T ss_dssp SSCCCCCCTTTTTTC---------TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred CCcCCCcChhHhccC---------CcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEe
Confidence 666654444434433 66777777777777666667777888888888888888777777888888888888
Q ss_pred CCCcCCCC
Q 048796 214 SGNQFKGE 221 (555)
Q Consensus 214 s~N~l~~~ 221 (555)
++|.+++.
T Consensus 187 ~~N~~~c~ 194 (251)
T 3m19_A 187 FGNQFDCS 194 (251)
T ss_dssp CSCCBCTT
T ss_pred eCCceeCC
Confidence 88888865
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.9e-24 Score=203.44 Aligned_cols=208 Identities=19% Similarity=0.153 Sum_probs=174.7
Q ss_pred CcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCc-CCCCCCccccCCCCccEEEeeC-CcCCCCCch
Q 048796 18 NSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK-LSGSLPNLTSQFDRLSTFNIRN-NSVTGTLPS 95 (555)
Q Consensus 18 N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~ 95 (555)
++++ .+|.-..+|++|+|++|+|+++.+..+..+++|++|+|++|. ++...+..|.++++|++|+|++ |.++...+.
T Consensus 21 ~~l~-~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~ 99 (239)
T 2xwt_C 21 KDIQ-RIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPD 99 (239)
T ss_dssp CSCS-SCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTT
T ss_pred cCcc-ccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHH
Confidence 3365 456633479999999999998888888889999999999997 8877777899999999999998 999977778
Q ss_pred hccCCCCccEEEcCCCcCCCCCchhhhCCCCCC---eEEccCC-cccccCCcCccccccccccCCCCCcC-EEEccCCcC
Q 048796 96 LLEISPRLVTLDVSSNQLKGPIPDNFFSSMALT---NLNLSGN-GFSGAIPLRSSHASELLVLPSYPPME-SLDLSGNAL 170 (555)
Q Consensus 96 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~---~L~Ls~N-~l~~~~p~~~~~~~~l~~l~~~~~L~-~L~Ls~N~l 170 (555)
.|..+++|++|++++|++++ +|. +..+.+|+ .|++++| .+++..+..+..+ ++|+ .|++++|.+
T Consensus 100 ~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l---------~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 100 ALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGL---------CNETLTLKLYNNGF 168 (239)
T ss_dssp SEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTT---------BSSEEEEECCSCCC
T ss_pred HhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccch---------hcceeEEEcCCCCC
Confidence 89999999999999999985 665 88888888 9999999 8987666666665 8899 999999999
Q ss_pred CCcCCccccCccccceeeccccc-ccCCCchhccCC-CCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCC
Q 048796 171 TGVLPSDIGNMGRLRLLNLANNH-LSGKMPSELSKL-GALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYND 239 (555)
Q Consensus 171 ~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~ 239 (555)
+...+..|.. ++|+.|+|++|+ +++..+..|..+ ++|+.|++++|+|++. |.....+|+.|+++++.
T Consensus 169 ~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 169 TSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSKGLEHLKELIARNTW 237 (239)
T ss_dssp CEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCTTCTTCSEEECTTC-
T ss_pred cccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-ChhHhccCceeeccCcc
Confidence 9555555555 899999999995 997777889999 9999999999999954 44444789999988763
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-23 Score=225.93 Aligned_cols=226 Identities=23% Similarity=0.219 Sum_probs=175.6
Q ss_pred CCCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCC--CccccCCCCccEEEeeC
Q 048796 9 TLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSL--PNLTSQFDRLSTFNIRN 86 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~L~~ 86 (555)
+|++|++++|.++......+++|++|++++|.+.+..+. ..+++|++|+|++|.+++.. +..+..+++|++|++++
T Consensus 305 ~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~ 382 (570)
T 2z63_A 305 GWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSF 382 (570)
T ss_dssp CCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCS
T ss_pred CccEEeeccCcccccCcccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCC
Confidence 788888888888744445677888888888887765543 45667888888888887543 56677888888888888
Q ss_pred CcCCCCCchhccCCCCccEEEcCCCcCCCCCc-hhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEc
Q 048796 87 NSVTGTLPSLLEISPRLVTLDVSSNQLKGPIP-DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDL 165 (555)
Q Consensus 87 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~L 165 (555)
|.+.+..+. +..+++|+.|++++|.+.+..+ ..+..+++|+.|++++|.+.+..|..+..+ ++|++|+|
T Consensus 383 n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---------~~L~~L~l 452 (570)
T 2z63_A 383 NGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL---------SSLEVLKM 452 (570)
T ss_dssp CSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTC---------TTCCEEEC
T ss_pred Ccccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcC---------CcCcEEEC
Confidence 888755444 7888888888888888876554 467778888888888888887777666655 78888888
Q ss_pred cCCcCC-CcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCC
Q 048796 166 SGNALT-GVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSG 242 (555)
Q Consensus 166 s~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~ 242 (555)
++|.++ +.+|..+..+++|+.|+|++|++++..|..+..+++|++|++++|++++..|..+. ++|+.|++++|+++|
T Consensus 453 ~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 532 (570)
T 2z63_A 453 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 532 (570)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccC
Confidence 888887 46777888888888888888888877788888888888888888888877666555 678888888888888
Q ss_pred CcCc
Q 048796 243 PIPE 246 (555)
Q Consensus 243 ~~p~ 246 (555)
.+|.
T Consensus 533 ~~~~ 536 (570)
T 2z63_A 533 SCPR 536 (570)
T ss_dssp CTTT
T ss_pred CCcc
Confidence 7763
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-22 Score=214.03 Aligned_cols=219 Identities=22% Similarity=0.230 Sum_probs=139.1
Q ss_pred CCCCCCEEECCCCcCCCCCC--CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 6 NSTTLSVLNLSSNSLSGTLP--TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
++++|++|+|++|.|++. | ..+++|++|+|++|+|+++. +..+++|++|+|++|.+++. + ++.+++|++|+
T Consensus 40 ~l~~L~~L~Ls~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~---~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 40 QLATLTSLDCHNSSITDM-TGIEKLTGLTKLICTSNNITTLD---LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp HHTTCCEEECCSSCCCCC-TTGGGCTTCSEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred HcCCCCEEEccCCCcccC-hhhcccCCCCEEEccCCcCCeEc---cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 456677777777766653 3 23456666777776666542 44555666666666666643 2 56666666666
Q ss_pred eeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcccccccc-----------
Q 048796 84 IRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELL----------- 152 (555)
Q Consensus 84 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~----------- 152 (555)
|++|++++. + +..+++|++|++++|++++. + +..+++|+.|++++|...+.++ +..+..+.
T Consensus 113 L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~--~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 113 CDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp CCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCC--CTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccc--cccCCcCCEEECCCCccce
Confidence 666666643 2 55666666666666666542 2 4444555555555553222221 11111100
Q ss_pred -ccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh----
Q 048796 153 -VLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS---- 227 (555)
Q Consensus 153 -~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---- 227 (555)
.+..+++|+.|++++|.+++. .+..+++|+.|++++|++++ +| +..+++|+.|++++|++++..+..+.
T Consensus 185 l~l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~ 258 (457)
T 3bz5_A 185 LDVSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTT 258 (457)
T ss_dssp CCCTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCE
T ss_pred eccccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCE
Confidence 023457889999999998875 47888999999999999997 55 78899999999999999976554433
Q ss_pred -----cCCCEEEeccCCCCCCcC
Q 048796 228 -----LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 228 -----~~L~~L~ls~N~l~~~~p 245 (555)
.+|+.|++++|.+.+.+|
T Consensus 259 L~l~~n~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 259 LHCIQTDLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp EECTTCCCSCCCCTTCTTCCEEE
T ss_pred EeccCCCCCEEECCCCccCCccc
Confidence 145666677777666665
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-22 Score=212.05 Aligned_cols=202 Identities=23% Similarity=0.223 Sum_probs=157.5
Q ss_pred CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEE
Q 048796 27 SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTL 106 (555)
Q Consensus 27 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L 106 (555)
.+++|++|+|++|.|++.+ .+..+++|++|+|++|.+++. + ++.+++|++|+|++|.+++. + +..+++|++|
T Consensus 40 ~l~~L~~L~Ls~n~l~~~~--~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L 111 (457)
T 3bz5_A 40 QLATLTSLDCHNSSITDMT--GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYL 111 (457)
T ss_dssp HHTTCCEEECCSSCCCCCT--TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEE
T ss_pred HcCCCCEEEccCCCcccCh--hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEE
Confidence 4789999999999999874 467788999999999999964 4 88999999999999999975 3 8899999999
Q ss_pred EcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcccccccc-------------ccCCCCCcCEEEccCCcCCCc
Q 048796 107 DVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELL-------------VLPSYPPMESLDLSGNALTGV 173 (555)
Q Consensus 107 ~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~-------------~l~~~~~L~~L~Ls~N~l~~~ 173 (555)
++++|++++ ++ +..+++|+.|++++|.+++. + ++.+..+. .+..+++|++|++++|.+++.
T Consensus 112 ~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~l 185 (457)
T 3bz5_A 112 NCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITEL 185 (457)
T ss_dssp ECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCCC
T ss_pred ECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccccccCCcCCEEECCCCcccee
Confidence 999999986 44 88999999999999999974 2 33332211 234567778888888888763
Q ss_pred CCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCCCcCcccc
Q 048796 174 LPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPENLR 249 (555)
Q Consensus 174 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~~~p~~l~ 249 (555)
| +..+++|+.|++++|.+++. .+..+++|+.|++++|++++ +|-.-.++|+.|++++|++++..+..+.
T Consensus 186 -~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip~~~l~~L~~L~l~~N~l~~~~~~~l~ 254 (457)
T 3bz5_A 186 -D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-IDVTPLTQLTYFDCSVNPLTELDVSTLS 254 (457)
T ss_dssp -C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CCCTTCTTCSEEECCSSCCSCCCCTTCT
T ss_pred -c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cCccccCCCCEEEeeCCcCCCcCHHHCC
Confidence 3 67777888888888888764 36777888888888888886 4522126788888888888876544433
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=214.54 Aligned_cols=216 Identities=25% Similarity=0.317 Sum_probs=126.8
Q ss_pred CCCCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 6 NSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++++|++|+|++|.+++..+ ..+++|++|+|++|.+++..+ +..+++|++|+|++|.+++..+ +..+++|++|++
T Consensus 66 ~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 141 (466)
T 1o6v_A 66 YLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 141 (466)
T ss_dssp GCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEE
T ss_pred hhcCCCEEECCCCccCCchhhhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEEC
Confidence 46778888888888876543 456677788888888876655 6667778888888888775432 677777888888
Q ss_pred eCCcCCCCCc-------------------hhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCc
Q 048796 85 RNNSVTGTLP-------------------SLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRS 145 (555)
Q Consensus 85 ~~N~l~~~~~-------------------~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~ 145 (555)
++|.+.+... ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+.+..+ +
T Consensus 142 ~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~ 217 (466)
T 1o6v_A 142 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--L 217 (466)
T ss_dssp EEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G
T ss_pred CCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--c
Confidence 8777764311 1245566777777777777632 236677777777777777765543 2
Q ss_pred cccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChh
Q 048796 146 SHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDK 225 (555)
Q Consensus 146 ~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 225 (555)
..+ ++|+.|++++|.+++. ..+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+-.
T Consensus 218 ~~l---------~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~ 284 (466)
T 1o6v_A 218 GIL---------TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLA 284 (466)
T ss_dssp GGC---------TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGT
T ss_pred ccc---------CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccccc
Confidence 222 4455555555554432 234444555555555555543322 444445555555555544332211
Q ss_pred hhcCCCEEEeccCCCCC
Q 048796 226 LSLKLNEFNVSYNDLSG 242 (555)
Q Consensus 226 ~~~~L~~L~ls~N~l~~ 242 (555)
..++|+.|++++|.+++
T Consensus 285 ~l~~L~~L~L~~n~l~~ 301 (466)
T 1o6v_A 285 GLTALTNLELNENQLED 301 (466)
T ss_dssp TCTTCSEEECCSSCCSC
T ss_pred CCCccCeEEcCCCcccC
Confidence 11444444444444444
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-23 Score=222.80 Aligned_cols=202 Identities=25% Similarity=0.235 Sum_probs=174.4
Q ss_pred CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEE
Q 048796 28 LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLD 107 (555)
Q Consensus 28 l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 107 (555)
+++|++|+|++|.|++..+..+..+++|+.|+|++|.+++..+ +..+++|++|+|++|.|++..+ .++|+.|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEE
Confidence 4589999999999999988889999999999999999987665 8999999999999999985432 38999999
Q ss_pred cCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCcccc-Cccccce
Q 048796 108 VSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIG-NMGRLRL 186 (555)
Q Consensus 108 L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~ 186 (555)
|++|.|++..+. .+++|+.|+|++|.+++..|..++.+ ++|+.|+|++|.|++..|..+. .+++|+.
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l---------~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~ 173 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCR---------SRVQYLDLKLNEIDTVNFAELAASSDTLEH 173 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGG---------SSEEEEECTTSCCCEEEGGGGGGGTTTCCE
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCC---------CCCCEEECCCCCCCCcChHHHhhhCCcccE
Confidence 999999976554 45789999999999999888877776 8999999999999998888886 7999999
Q ss_pred eecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccCCC
Q 048796 187 LNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNFP 252 (555)
Q Consensus 187 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~~ 252 (555)
|+|++|.|++. + .+..+++|+.|+|++|.|++..|. +. ++|+.|++++|.+++ +|..+..++
T Consensus 174 L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~ 237 (487)
T 3oja_A 174 LNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQ 237 (487)
T ss_dssp EECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCT
T ss_pred EecCCCccccc-c-ccccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCC
Confidence 99999999976 3 344689999999999999976665 44 799999999999996 566554443
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.2e-24 Score=214.00 Aligned_cols=222 Identities=25% Similarity=0.249 Sum_probs=183.7
Q ss_pred CCCCEEECCCCcCCCCCC---CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLP---TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
..++.++++.+++...+. ..+++|++|+|++|+|++..+..+..+++|++|+|++|.+++..+ +..+++|++|+|
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 457777888887763322 345689999999999999888888999999999999999986554 899999999999
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~ 164 (555)
++|.+++.. ..++|++|++++|++++..+. .+++|+.|++++|.+++..+..+..+ ++|++|+
T Consensus 88 s~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l---------~~L~~L~ 150 (317)
T 3o53_A 88 NNNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCR---------SRVQYLD 150 (317)
T ss_dssp CSSEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGG---------SSEEEEE
T ss_pred cCCcccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhcc---------CCCCEEE
Confidence 999998533 348999999999999865444 36789999999999998777777766 8999999
Q ss_pred ccCCcCCCcCCcccc-CccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCC
Q 048796 165 LSGNALTGVLPSDIG-NMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLS 241 (555)
Q Consensus 165 Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~ 241 (555)
|++|.+++..+..+. .+++|+.|+|++|.|++. + ....+++|++|+|++|++++..+. +. ++|+.|++++|.++
T Consensus 151 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp CTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCC
T ss_pred CCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcchhh-hcccCcccEEECcCCccc
Confidence 999999988777764 789999999999999865 3 334589999999999999965554 54 89999999999999
Q ss_pred CCcCccccCCC
Q 048796 242 GPIPENLRNFP 252 (555)
Q Consensus 242 ~~~p~~l~~~~ 252 (555)
. +|..+..++
T Consensus 228 ~-l~~~~~~l~ 237 (317)
T 3o53_A 228 L-IEKALRFSQ 237 (317)
T ss_dssp E-ECTTCCCCT
T ss_pred c-hhhHhhcCC
Confidence 4 565554443
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-22 Score=194.47 Aligned_cols=180 Identities=20% Similarity=0.225 Sum_probs=163.9
Q ss_pred CCCCEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeC
Q 048796 8 TTLSVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRN 86 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 86 (555)
.+.++++++++.++ .+|.. .++++.|+|++|+|++..+..+..+++|++|+|++|.|++..+..|..+++|++|+|++
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CCCeEEecCCCCcc-ccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 46889999999998 45544 46899999999999999888899999999999999999988888899999999999999
Q ss_pred CcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEcc
Q 048796 87 NSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLS 166 (555)
Q Consensus 87 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls 166 (555)
|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+++..+..+..+ ++|++|+|+
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---------~~L~~L~L~ 163 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKL---------TNLQTLSLS 163 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---------TTCCEEECC
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcC---------cCCCEEECC
Confidence 99998888899999999999999999997777778899999999999999997777667666 899999999
Q ss_pred CCcCCCcCCccccCccccceeecccccccCC
Q 048796 167 GNALTGVLPSDIGNMGRLRLLNLANNHLSGK 197 (555)
Q Consensus 167 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 197 (555)
+|.|++..+..|..+++|+.|+|++|.++..
T Consensus 164 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 164 TNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999988888999999999999999999864
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-23 Score=210.33 Aligned_cols=181 Identities=23% Similarity=0.262 Sum_probs=84.3
Q ss_pred CccEEEccCCcCCCCCCccc--cCCCCccEEEeeCCcCCCCCc----hhccCCCCccEEEcCCCcCCCCCchhhhCCCCC
Q 048796 54 NLEILDLSSNKLSGSLPNLT--SQFDRLSTFNIRNNSVTGTLP----SLLEISPRLVTLDVSSNQLKGPIPDNFFSSMAL 127 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L 127 (555)
+|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++.+..+..+..+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 35555555555555555444 455555555555555554322 222345555555555555554444455555555
Q ss_pred CeEEccCCccccc--CCcCccccccccccCCCCCcCEEEccCCcCCCcCC--c-cccCccccceeecccccccCCCchhc
Q 048796 128 TNLNLSGNGFSGA--IPLRSSHASELLVLPSYPPMESLDLSGNALTGVLP--S-DIGNMGRLRLLNLANNHLSGKMPSEL 202 (555)
Q Consensus 128 ~~L~Ls~N~l~~~--~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p--~-~~~~l~~L~~L~L~~N~l~~~~~~~~ 202 (555)
++|+|++|++.+. ++... .+..+++|++|+|++|.++...+ . .+..+++|++|+|++|.|++..|..+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~-------~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~ 244 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAAL-------CPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSA 244 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTS-------CTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCC
T ss_pred CEEECCCCCCccchhhhHHH-------hhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhH
Confidence 5555555554321 10000 01112455555555555542111 0 12344555555555555554444444
Q ss_pred cCC---CCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCC
Q 048796 203 SKL---GALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSG 242 (555)
Q Consensus 203 ~~l---~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~ 242 (555)
..+ ++|++|+|++|+|+ .+|..+.++|+.|++++|++++
T Consensus 245 ~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 245 PRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNR 286 (310)
T ss_dssp SSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCS
T ss_pred HhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCC
Confidence 433 35555555555555 3344333455555555555554
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.7e-23 Score=222.21 Aligned_cols=229 Identities=16% Similarity=0.148 Sum_probs=193.6
Q ss_pred CCCCCEEECCCCcCCCCCCC-CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEee
Q 048796 7 STTLSVLNLSSNSLSGTLPT-SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIR 85 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 85 (555)
|+..-..++++|+++. +|. -.++|++|+|++|+|++..+..+..+++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 4 C~~~~~c~~~~~~l~~-ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls 82 (549)
T 2z81_A 4 CDASGVCDGRSRSFTS-IPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLS 82 (549)
T ss_dssp ECTTSEEECTTSCCSS-CCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred CCCCceEECCCCcccc-ccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECC
Confidence 5556668999999984 554 45689999999999999888888999999999999999998888999999999999999
Q ss_pred CCcCCCCCchhccCCCCccEEEcCCCcCCC-CCchhhhCCCCCCeEEccCCcccccCC-cCccccccccccCCCCCcCEE
Q 048796 86 NNSVTGTLPSLLEISPRLVTLDVSSNQLKG-PIPDNFFSSMALTNLNLSGNGFSGAIP-LRSSHASELLVLPSYPPMESL 163 (555)
Q Consensus 86 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~~~~l~~l~~~~~L~~L 163 (555)
+|.+++..+..+..+++|++|+|++|++++ ..|..+..+++|+.|++++|.+.+.+| ..+..+ ++|++|
T Consensus 83 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l---------~~L~~L 153 (549)
T 2z81_A 83 DNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGL---------TSLNEL 153 (549)
T ss_dssp TSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC---------CEEEEE
T ss_pred CCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcc---------cccCee
Confidence 999998888889999999999999999986 356789999999999999998544444 456555 899999
Q ss_pred EccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCC--Chhh---hcCCCEEEeccC
Q 048796 164 DLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEI--PDKL---SLKLNEFNVSYN 238 (555)
Q Consensus 164 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--p~~~---~~~L~~L~ls~N 238 (555)
++++|.+++..|..+..+++|+.|+++.|.+.......+..+++|++|++++|.+++.. |..+ ..+|+.|++++|
T Consensus 154 ~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n 233 (549)
T 2z81_A 154 EIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGS 233 (549)
T ss_dssp EEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESC
T ss_pred eccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceecccc
Confidence 99999999999999999999999999999987443333467899999999999999742 2111 257888888888
Q ss_pred CCCCCcC
Q 048796 239 DLSGPIP 245 (555)
Q Consensus 239 ~l~~~~p 245 (555)
.+++..+
T Consensus 234 ~l~~~~~ 240 (549)
T 2z81_A 234 VLTDESF 240 (549)
T ss_dssp EEEHHHH
T ss_pred ccchhHH
Confidence 8776544
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-23 Score=206.02 Aligned_cols=211 Identities=18% Similarity=0.252 Sum_probs=168.0
Q ss_pred CCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 9 TLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
++..+.+..+.+++.+. ..+++|++|++++|.++... .+..+++|++|+|++|.+++..+ +..+++|++|+|++|
T Consensus 20 ~~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~~~i~~l~--~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n 95 (308)
T 1h6u_A 20 NAIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGN 95 (308)
T ss_dssp HHHHHHTTCSSTTSEECHHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSC
T ss_pred HHHHHHhCCCCcCceecHHHcCCcCEEEeeCCCccCch--hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCC
Confidence 34445566677765333 35788999999999998654 35667889999999999985444 889999999999999
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccC
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSG 167 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~ 167 (555)
.+++. ..+..+++|++|+|++|++++ ++. +..+++|+.|++++|.+++..+ +..+ ++|++|+|++
T Consensus 96 ~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l---------~~L~~L~l~~ 160 (308)
T 1h6u_A 96 PLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGL---------TNLQYLSIGN 160 (308)
T ss_dssp CCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGC---------TTCCEEECCS
T ss_pred cCCCc--hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCC---------CCccEEEccC
Confidence 99864 368889999999999999985 443 8889999999999999886543 3333 8899999999
Q ss_pred CcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCC
Q 048796 168 NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSG 242 (555)
Q Consensus 168 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~ 242 (555)
|.+++..+ +..+++|+.|+|++|.+++..+ +..+++|++|++++|++++..+-.-.++|+.|++++|++++
T Consensus 161 n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 161 AQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp SCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEEEEEEEC
T ss_pred CcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccccccCCCCCCEEEccCCeeec
Confidence 99986543 8899999999999999986543 78899999999999999966542222789999999999975
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=203.14 Aligned_cols=227 Identities=19% Similarity=0.169 Sum_probs=175.9
Q ss_pred CCCCCEEECCCCcCCCCCC------CCCCCCCEEEcCCCcCCCCCcccc--cCCCCccEEEccCCcCCCCCC----cccc
Q 048796 7 STTLSVLNLSSNSLSGTLP------TSLKSCVILDLSRNMISGDISDMQ--NWEANLEILDLSSNKLSGSLP----NLTS 74 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~------~~l~~L~~L~L~~N~l~~~~~~~~--~~~~~L~~L~Ls~N~l~~~~~----~~~~ 74 (555)
...++.|.+.++.++.... -.+++|++|+|++|.+++..+..+ ..+++|++|+|++|.+++..+ ..+.
T Consensus 63 ~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp SCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred hcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 3457888998888763211 124579999999999998877666 778899999999999997655 3446
Q ss_pred CCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCC--Cc--hhhhCCCCCCeEEccCCcccccCCcCcccccc
Q 048796 75 QFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGP--IP--DNFFSSMALTNLNLSGNGFSGAIPLRSSHASE 150 (555)
Q Consensus 75 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~~--~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~ 150 (555)
.+++|++|+|++|.+.+..+..+..+++|++|+|++|++.+. ++ ..+..+++|++|+|++|.++.. +.....
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~--- 218 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETP-TGVCAA--- 218 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCH-HHHHHH---
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCch-HHHHHH---
Confidence 789999999999999988888999999999999999998642 22 2236788999999999999632 211000
Q ss_pred ccccCCCCCcCEEEccCCcCCCcCCccccCc---cccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh
Q 048796 151 LLVLPSYPPMESLDLSGNALTGVLPSDIGNM---GRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS 227 (555)
Q Consensus 151 l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 227 (555)
.+..+++|++|+|++|.|++..|..+..+ ++|+.|+|++|+|+ .+|..+. ++|+.|||++|+|++.......
T Consensus 219 --l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~~~~l 293 (310)
T 4glp_A 219 --LAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQPDEL 293 (310)
T ss_dssp --HHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCCTTSC
T ss_pred --HHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCchhhhC
Confidence 01223889999999999998888777776 69999999999999 5676664 7999999999999974221112
Q ss_pred cCCCEEEeccCCCCC
Q 048796 228 LKLNEFNVSYNDLSG 242 (555)
Q Consensus 228 ~~L~~L~ls~N~l~~ 242 (555)
++|+.|++++|+|+.
T Consensus 294 ~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 294 PEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCSCEECSSTTTSC
T ss_pred CCccEEECcCCCCCC
Confidence 789999999999974
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-22 Score=200.02 Aligned_cols=192 Identities=18% Similarity=0.256 Sum_probs=165.5
Q ss_pred cCCCCCCEEECCCCcCCCCCC--CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 5 INSTTLSVLNLSSNSLSGTLP--TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
.++++|++|++++|.++. ++ ..+++|++|+|++|++++..+ +..+++|++|+|++|.+++. ..+..+++|++|
T Consensus 38 ~~l~~L~~L~l~~~~i~~-l~~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L 112 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTT-IEGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTL 112 (308)
T ss_dssp HHHHTCCEEECTTSCCCC-CTTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEE
T ss_pred HHcCCcCEEEeeCCCccC-chhhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEE
Confidence 356789999999999985 34 357899999999999998766 77888999999999999853 368999999999
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCE
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMES 162 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~ 162 (555)
+|++|.+++.. .+..+++|++|+|++|++++..+ +..+++|+.|+|++|.+++..+ +.. +++|+.
T Consensus 113 ~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~---------l~~L~~ 177 (308)
T 1h6u_A 113 DLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LAN---------LSKLTT 177 (308)
T ss_dssp ECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTT---------CTTCCE
T ss_pred ECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcC---------CCCCCE
Confidence 99999999653 38999999999999999985433 8899999999999999986433 333 499999
Q ss_pred EEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCC
Q 048796 163 LDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKG 220 (555)
Q Consensus 163 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 220 (555)
|+|++|.+++..+ +..+++|+.|+|++|++++.. .+..+++|+.|++++|.+++
T Consensus 178 L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 178 LKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp EECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred EECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 9999999997644 889999999999999999654 38899999999999999985
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-23 Score=211.97 Aligned_cols=231 Identities=19% Similarity=0.214 Sum_probs=136.9
Q ss_pred CCCCEEECCCCcCCCCCCC--CCCCCCEEEcCCCcCCCC-CcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPT--SLKSCVILDLSRNMISGD-ISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~--~l~~L~~L~L~~N~l~~~-~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
.+|+.|++++|.+++..+. .+++|++|+|++|.+++. .+..+..+++|++|+|++|.+++..+..++.+++|++|+|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L 149 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 149 (336)
T ss_dssp TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC
T ss_pred ccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEEC
Confidence 4566666666666655443 245666777777766543 3445555666777777777666555666666677777777
Q ss_pred eCC-cCCCC-CchhccCCCCccEEEcCCC-cCCCC-CchhhhCCC-CCCeEEccCCc--cc-ccCCcCccccccccccCC
Q 048796 85 RNN-SVTGT-LPSLLEISPRLVTLDVSSN-QLKGP-IPDNFFSSM-ALTNLNLSGNG--FS-GAIPLRSSHASELLVLPS 156 (555)
Q Consensus 85 ~~N-~l~~~-~~~~l~~l~~L~~L~L~~N-~l~~~-~~~~~~~~~-~L~~L~Ls~N~--l~-~~~p~~~~~~~~l~~l~~ 156 (555)
++| .+++. ++..+..+++|++|++++| .+++. ++..+..++ +|+.|+|++|. ++ +.++..+..+
T Consensus 150 ~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~-------- 221 (336)
T 2ast_B 150 SGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRC-------- 221 (336)
T ss_dssp TTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHC--------
T ss_pred CCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhC--------
Confidence 776 45542 4455666667777777776 66532 355566666 67777777663 33 2222222222
Q ss_pred CCCcCEEEccCCc-CCCcCCccccCccccceeeccccc-ccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEE
Q 048796 157 YPPMESLDLSGNA-LTGVLPSDIGNMGRLRLLNLANNH-LSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFN 234 (555)
Q Consensus 157 ~~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ 234 (555)
++|++|+|++|. +++..+..+..+++|+.|+|++|. +.......+..+++|+.|++++| ++...-..+...+..|+
T Consensus 222 -~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~~~~~l~~~l~~L~ 299 (336)
T 2ast_B 222 -PNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHLQ 299 (336)
T ss_dssp -TTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTSE
T ss_pred -CCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHHHHHHHHhhCcceE
Confidence 667777777776 555555666667777777777764 22222224566677777777766 33222222223466666
Q ss_pred eccCCCCCCcCccc
Q 048796 235 VSYNDLSGPIPENL 248 (555)
Q Consensus 235 ls~N~l~~~~p~~l 248 (555)
+++|++++..|..+
T Consensus 300 l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 300 INCSHFTTIARPTI 313 (336)
T ss_dssp ESCCCSCCTTCSSC
T ss_pred EecccCccccCCcc
Confidence 77777776666544
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-22 Score=192.56 Aligned_cols=195 Identities=17% Similarity=0.194 Sum_probs=167.5
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCc-CCCCCcccccCCCCccEEEccC-CcCCCCCCccccCCCCccEE
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNM-ISGDISDMQNWEANLEILDLSS-NKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~-l~~~~~~~~~~~~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L 82 (555)
.+|++|+|++|+|++..+. .+++|++|+|++|+ ++.+.+..|..+++|++|+|++ |.+++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 4799999999999976554 45789999999997 9988888899999999999999 99997777889999999999
Q ss_pred EeeCCcCCCCCchhccCCCCcc---EEEcCCC-cCCCCCchhhhCCCCCC-eEEccCCcccccCCcCccccccccccCCC
Q 048796 83 NIRNNSVTGTLPSLLEISPRLV---TLDVSSN-QLKGPIPDNFFSSMALT-NLNLSGNGFSGAIPLRSSHASELLVLPSY 157 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~---~L~L~~N-~l~~~~~~~~~~~~~L~-~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~ 157 (555)
+|++|.+++ +|. +..+++|+ .|++++| ++++..+..|..+++|+ .|++++|.++ .+|......
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~--------- 178 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG--------- 178 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT---------
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC---------
Confidence 999999996 555 88888888 9999999 99876667799999999 9999999998 455433222
Q ss_pred CCcCEEEccCCc-CCCcCCccccCc-cccceeecccccccCCCchhccCCCCCCEEeCCCCc
Q 048796 158 PPMESLDLSGNA-LTGVLPSDIGNM-GRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQ 217 (555)
Q Consensus 158 ~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 217 (555)
++|+.|+|++|. +++..+..|..+ ++|+.|+|++|+|++. |.. .+++|+.|+++++.
T Consensus 179 ~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 179 TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNTW 237 (239)
T ss_dssp CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC-
T ss_pred CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCcc
Confidence 689999999995 998888889999 9999999999999954 433 67899999998874
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.4e-24 Score=220.71 Aligned_cols=230 Identities=20% Similarity=0.234 Sum_probs=177.9
Q ss_pred CCCCCCEEECCCCcCCCCC-------CCCCCCCCEEEcCCCcCCC---CCccc-------ccCCCCccEEEccCCcCCC-
Q 048796 6 NSTTLSVLNLSSNSLSGTL-------PTSLKSCVILDLSRNMISG---DISDM-------QNWEANLEILDLSSNKLSG- 67 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~-------~~~l~~L~~L~L~~N~l~~---~~~~~-------~~~~~~L~~L~Ls~N~l~~- 67 (555)
++++|++|+|++|+|+... ...+++|++|+|++|.+.. ..+.. +..+++|++|+|++|.+++
T Consensus 30 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 109 (386)
T 2ca6_A 30 EDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPT 109 (386)
T ss_dssp HCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTT
T ss_pred cCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHH
Confidence 5678999999999988642 2357789999999975543 22222 3567889999999999986
Q ss_pred ---CCCccccCCCCccEEEeeCCcCCCCCchhc----cCC---------CCccEEEcCCCcCC-CCCc---hhhhCCCCC
Q 048796 68 ---SLPNLTSQFDRLSTFNIRNNSVTGTLPSLL----EIS---------PRLVTLDVSSNQLK-GPIP---DNFFSSMAL 127 (555)
Q Consensus 68 ---~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l----~~l---------~~L~~L~L~~N~l~-~~~~---~~~~~~~~L 127 (555)
.++..+..+++|++|+|++|.++...+..+ ..+ ++|++|+|++|+++ +.++ ..+..+++|
T Consensus 110 ~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L 189 (386)
T 2ca6_A 110 AQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL 189 (386)
T ss_dssp THHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCc
Confidence 467778889999999999999975444333 333 89999999999997 3344 467788899
Q ss_pred CeEEccCCcccc-----cCCcCccccccccccCCCCCcCEEEccCCcCC----CcCCccccCccccceeecccccccCC-
Q 048796 128 TNLNLSGNGFSG-----AIPLRSSHASELLVLPSYPPMESLDLSGNALT----GVLPSDIGNMGRLRLLNLANNHLSGK- 197 (555)
Q Consensus 128 ~~L~Ls~N~l~~-----~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~- 197 (555)
+.|+|++|.++. ..+..+..+ ++|++|+|++|.++ ..+|..+..+++|+.|+|++|.|++.
T Consensus 190 ~~L~L~~n~l~~~g~~~l~~~~l~~~---------~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 260 (386)
T 2ca6_A 190 HTVKMVQNGIRPEGIEHLLLEGLAYC---------QELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARG 260 (386)
T ss_dssp CEEECCSSCCCHHHHHHHHHTTGGGC---------TTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHH
T ss_pred CEEECcCCCCCHhHHHHHHHHHhhcC---------CCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhh
Confidence 999999998872 223244444 88999999999996 56677888899999999999999865
Q ss_pred ---Cchhcc--CCCCCCEEeCCCCcCCC----CCChhh-h--cCCCEEEeccCCCCCCc
Q 048796 198 ---MPSELS--KLGALEYLDLSGNQFKG----EIPDKL-S--LKLNEFNVSYNDLSGPI 244 (555)
Q Consensus 198 ---~~~~~~--~l~~L~~L~Ls~N~l~~----~~p~~~-~--~~L~~L~ls~N~l~~~~ 244 (555)
++..+. .+++|+.|+|++|.|++ .+|..+ . ++|+.|++++|++++..
T Consensus 261 ~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 261 AAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 456663 38999999999999997 477666 2 78999999999998654
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-21 Score=211.29 Aligned_cols=218 Identities=29% Similarity=0.358 Sum_probs=116.6
Q ss_pred CCCCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 8 TTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
++|++|+|++|+|+ .+|..+++|++|+|++|+|+.++. .+++|++|+|++|.|++ +|. .+++|+.|+|++|
T Consensus 61 ~~L~~L~L~~N~l~-~lp~~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N 131 (622)
T 3g06_A 61 AHITTLVIPDNNLT-SLPALPPELRTLEVSGNQLTSLPV----LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGN 131 (622)
T ss_dssp TTCSEEEECSCCCS-CCCCCCTTCCEEEECSCCCSCCCC----CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSS
T ss_pred CCCcEEEecCCCCC-CCCCcCCCCCEEEcCCCcCCcCCC----CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCC
Confidence 34555555555555 334445555555555555554332 23445555555555542 222 2334444444444
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCchhh-----------------hCCCCCCeEEccCCcccccCCcCcccccc
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNF-----------------FSSMALTNLNLSGNGFSGAIPLRSSHASE 150 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~-----------------~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~ 150 (555)
+|+. +|.. +++|++|+|++|++++ +|..+ ..+++|+.|+|++|.+++ +|..+..+..
T Consensus 132 ~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~ 205 (622)
T 3g06_A 132 QLTS-LPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTLPSELYK 205 (622)
T ss_dssp CCSC-CCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCCCTTCCE
T ss_pred CCCc-CCCC---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCccchhhE
Confidence 4442 2211 2444444444444442 11111 123566667777776664 3322222221
Q ss_pred cc-------cc-CCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCC
Q 048796 151 LL-------VL-PSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEI 222 (555)
Q Consensus 151 l~-------~l-~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 222 (555)
+. .+ ..+++|+.|+|++|.|++ +| ..+++|+.|+|++|.|+. +|. .+++|+.|+|++|+|+ .+
T Consensus 206 L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~l 276 (622)
T 3g06_A 206 LWAYNNRLTSLPALPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RL 276 (622)
T ss_dssp EECCSSCCSSCCCCCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SC
T ss_pred EECcCCcccccCCCCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cC
Confidence 11 00 022567777777777775 33 345677777777777773 444 4577788888888877 55
Q ss_pred Chhhh--cCCCEEEeccCCCCCCcCcccc
Q 048796 223 PDKLS--LKLNEFNVSYNDLSGPIPENLR 249 (555)
Q Consensus 223 p~~~~--~~L~~L~ls~N~l~~~~p~~l~ 249 (555)
|..+. ++|+.|++++|++++.+|..+.
T Consensus 277 p~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 277 PESLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp CGGGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred CHHHhhccccCEEEecCCCCCCcCHHHHH
Confidence 66555 6778888888888777766544
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.2e-21 Score=201.47 Aligned_cols=199 Identities=30% Similarity=0.357 Sum_probs=86.9
Q ss_pred CCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcC
Q 048796 10 LSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSV 89 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 89 (555)
|++|++++|.+++ +|+.+++|++|++++|+++++.. ..++|++|+|++|.+++ +| .++++++|++|++++|++
T Consensus 93 L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~----~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l 165 (454)
T 1jl5_A 93 LESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSD----LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSL 165 (454)
T ss_dssp CSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCS----CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCC
T ss_pred CCEEEccCCcCCc-cccccCCCcEEECCCCccCcccC----CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcC
Confidence 4444444444443 33333444444444444443221 01244444444444443 33 244444444444444444
Q ss_pred CCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCc
Q 048796 90 TGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNA 169 (555)
Q Consensus 90 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~ 169 (555)
++ +|..+ .+|++|++++|++++ +| .+..+++|+.|++++|.+++ +|.. .++|++|++++|.
T Consensus 166 ~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~------------~~~L~~L~l~~n~ 226 (454)
T 1jl5_A 166 KK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL------------PLSLESIVAGNNI 226 (454)
T ss_dssp SC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC------------CTTCCEEECCSSC
T ss_pred cc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC------------cCcccEEECcCCc
Confidence 43 22211 244444444444443 23 34444445555555554442 1110 0344555555555
Q ss_pred CCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCC
Q 048796 170 LTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSG 242 (555)
Q Consensus 170 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~ 242 (555)
++ .+| .+..+++|+.|++++|++++ +|. .+++|+.|++++|++++ +|... .+|+.|++++|.+++
T Consensus 227 l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~---~~~~L~~L~l~~N~l~~-l~~~~-~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 227 LE-ELP-ELQNLPFLTTIYADNNLLKT-LPD---LPPSLEALNVRDNYLTD-LPELP-QSLTFLDVSENIFSG 291 (454)
T ss_dssp CS-SCC-CCTTCTTCCEEECCSSCCSS-CCS---CCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCSSCCSE
T ss_pred CC-ccc-ccCCCCCCCEEECCCCcCCc-ccc---cccccCEEECCCCcccc-cCccc-CcCCEEECcCCccCc
Confidence 55 233 24555555555555555553 222 12445555555555553 22211 345555555555554
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-21 Score=182.89 Aligned_cols=182 Identities=17% Similarity=0.139 Sum_probs=137.5
Q ss_pred CCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcC
Q 048796 10 LSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSV 89 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 89 (555)
-+.++++++.++.......++|++|+|++|+++++.+..+..+++|++|+|++|.+++..+..|..+++|++|+|++|++
T Consensus 9 ~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 88 (208)
T 2o6s_A 9 GTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQL 88 (208)
T ss_dssp TTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcC
Confidence 36778888888744434456788888888888877777777778888888888888866666778888888888888888
Q ss_pred CCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCc
Q 048796 90 TGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNA 169 (555)
Q Consensus 90 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~ 169 (555)
++..+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|.+++..+..+..+ ++|++|+|++|.
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l---------~~L~~L~l~~N~ 159 (208)
T 2o6s_A 89 QSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRL---------TSLQYIWLHDNP 159 (208)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC---------TTCCEEECCSCC
T ss_pred CccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccC---------CCccEEEecCCC
Confidence 87666677888888888888888886666667778888888888888876555445444 777888888887
Q ss_pred CCCcCCccccCccccceeecccccccCCCchhccCCCC
Q 048796 170 LTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGA 207 (555)
Q Consensus 170 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 207 (555)
+.+ .++.|+.|++..|.++|.+|..++.++.
T Consensus 160 ~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 160 WDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp BCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred eec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 663 3456777888888888777777766554
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.87 E-value=5.5e-21 Score=200.59 Aligned_cols=209 Identities=26% Similarity=0.336 Sum_probs=118.7
Q ss_pred CCCCEEECCCCcCCCCCC--CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEee
Q 048796 8 TTLSVLNLSSNSLSGTLP--TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIR 85 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 85 (555)
++|++|+|++|++++ +| ..+++|++|++++|++++++.. ..+|++|+|++|.+++ +| .+.++++|++|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp~~~~l~~L~~L~l~~N~l~~lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LPELQNSSFLKIIDVDNNSLKKLPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSCCSCCCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-CcccCCCCCCCEEECCCCcCcccCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 578888888888875 55 2345677888888888764322 2368888888888875 45 47778888888888
Q ss_pred CCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccc-------c-CCC
Q 048796 86 NNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLV-------L-PSY 157 (555)
Q Consensus 86 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~-------l-~~~ 157 (555)
+|.+++ +|.. .++|++|++++|+++ .+| .+..+++|+.|++++|.+++ +|.....+..+.. + ...
T Consensus 204 ~N~l~~-l~~~---~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N~l~~l~~~~ 276 (454)
T 1jl5_A 204 NNSLKK-LPDL---PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTDLPELP 276 (454)
T ss_dssp SSCCSS-CCCC---CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSCCCCCC
T ss_pred CCcCCc-CCCC---cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-ccccccccCEEECCCCcccccCccc
Confidence 888775 3322 246777777777776 555 36677777777777777764 3322211111100 0 012
Q ss_pred CCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCC-CCCCEEeCCCCcCCCCCChhhhcCCCEEEec
Q 048796 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKL-GALEYLDLSGNQFKGEIPDKLSLKLNEFNVS 236 (555)
Q Consensus 158 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls 236 (555)
++|+.|++++|.+++.. . + .++|+.|++++|.+++. ..+ ++|+.|++++|++++ +|..+ ++|+.|+++
T Consensus 277 ~~L~~L~ls~N~l~~l~-~-~--~~~L~~L~l~~N~l~~i-----~~~~~~L~~L~Ls~N~l~~-lp~~~-~~L~~L~L~ 345 (454)
T 1jl5_A 277 QSLTFLDVSENIFSGLS-E-L--PPNLYYLNASSNEIRSL-----CDLPPSLEELNVSNNKLIE-LPALP-PRLERLIAS 345 (454)
T ss_dssp TTCCEEECCSSCCSEES-C-C--CTTCCEEECCSSCCSEE-----CCCCTTCCEEECCSSCCSC-CCCCC-TTCCEEECC
T ss_pred CcCCEEECcCCccCccc-C-c--CCcCCEEECcCCcCCcc-----cCCcCcCCEEECCCCcccc-ccccC-CcCCEEECC
Confidence 44555555555555421 0 0 12344444444444321 111 355555555555553 33222 455555555
Q ss_pred cCCCC
Q 048796 237 YNDLS 241 (555)
Q Consensus 237 ~N~l~ 241 (555)
+|.++
T Consensus 346 ~N~l~ 350 (454)
T 1jl5_A 346 FNHLA 350 (454)
T ss_dssp SSCCS
T ss_pred CCccc
Confidence 55555
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.4e-21 Score=204.68 Aligned_cols=185 Identities=28% Similarity=0.417 Sum_probs=146.4
Q ss_pred CCCCEEECCCCcCCCCCCC-CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeC
Q 048796 8 TTLSVLNLSSNSLSGTLPT-SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRN 86 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 86 (555)
.+|+.|+|++|+|++ +|. .+++|++|+|++|+|+.++ ..+++|+.|+|++|.|++ +|. +.. +|++|+|++
T Consensus 59 ~~L~~L~Ls~n~L~~-lp~~l~~~L~~L~Ls~N~l~~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 59 NQFSELQLNRLNLSS-LPDNLPPQITVLEITQNALISLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp TTCSEEECCSSCCSC-CCSCCCTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCS
T ss_pred CCccEEEeCCCCCCc-cCHhHcCCCCEEECcCCCCcccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCC
Confidence 379999999999987 554 5678999999999998655 345789999999999986 666 555 899999999
Q ss_pred CcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEcc
Q 048796 87 NSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLS 166 (555)
Q Consensus 87 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls 166 (555)
|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|.|++ +|. +. ++|+.|+|+
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~-----------~~L~~L~Ls 188 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP-----------ESLEALDVS 188 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC-----------TTCCEEECC
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh-----------CCCCEEECc
Confidence 99986 554 67889999999999985 555 56789999999999886 454 32 678999999
Q ss_pred CCcCCCcCCccccCcccc-------ceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh
Q 048796 167 GNALTGVLPSDIGNMGRL-------RLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS 227 (555)
Q Consensus 167 ~N~l~~~~p~~~~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 227 (555)
+|.|+ .+|. |.. +| +.|+|++|.|+ .+|..+..+++|+.|+|++|.|++.+|..+.
T Consensus 189 ~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 251 (571)
T 3cvr_A 189 TNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLS 251 (571)
T ss_dssp SSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHH
T ss_pred CCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHH
Confidence 99998 4555 554 67 89999999998 5777777789999999999999888777655
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-22 Score=206.21 Aligned_cols=229 Identities=21% Similarity=0.220 Sum_probs=173.3
Q ss_pred EEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCc----ccccCCC-CccEEEccCCcCCCCCCccccCC-----CC
Q 048796 12 VLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDIS----DMQNWEA-NLEILDLSSNKLSGSLPNLTSQF-----DR 78 (555)
Q Consensus 12 ~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~----~~~~~~~-~L~~L~Ls~N~l~~~~~~~~~~l-----~~ 78 (555)
.++|++|++++.+|. ..++|++|+|++|.|++... ..+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 578899999987774 33469999999999988775 6666777 89999999999997777777664 89
Q ss_pred ccEEEeeCCcCCCCCchhc----cCC-CCccEEEcCCCcCCCCCchhhhC-----CCCCCeEEccCCcccccCCcCcccc
Q 048796 79 LSTFNIRNNSVTGTLPSLL----EIS-PRLVTLDVSSNQLKGPIPDNFFS-----SMALTNLNLSGNGFSGAIPLRSSHA 148 (555)
Q Consensus 79 L~~L~L~~N~l~~~~~~~l----~~l-~~L~~L~L~~N~l~~~~~~~~~~-----~~~L~~L~Ls~N~l~~~~p~~~~~~ 148 (555)
|++|+|++|.+++..+..+ ..+ ++|++|+|++|++++..+..+.. ..+|+.|+|++|.+++.....+...
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999987766644 444 89999999999998666655443 3699999999999985443333211
Q ss_pred ccccccCCCC-CcCEEEccCCcCCCcCCcccc----Cc-cccceeecccccccCC----CchhccC-CCCCCEEeCCCCc
Q 048796 149 SELLVLPSYP-PMESLDLSGNALTGVLPSDIG----NM-GRLRLLNLANNHLSGK----MPSELSK-LGALEYLDLSGNQ 217 (555)
Q Consensus 149 ~~l~~l~~~~-~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~L~~N~l~~~----~~~~~~~-l~~L~~L~Ls~N~ 217 (555)
+..++ +|++|+|++|.+++..+..+. .+ ++|+.|+|++|.|++. ++..+.. .++|+.|||++|.
T Consensus 162 -----l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 236 (362)
T 3goz_A 162 -----LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNC 236 (362)
T ss_dssp -----HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSC
T ss_pred -----HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCC
Confidence 11224 899999999999887765544 34 5899999999999863 3445544 4589999999999
Q ss_pred CCCCCChhhh------cCCCEEEeccCCCCCCcC
Q 048796 218 FKGEIPDKLS------LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 218 l~~~~p~~~~------~~L~~L~ls~N~l~~~~p 245 (555)
+++..+..+. .+|+.|++++|.+....+
T Consensus 237 l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~ 270 (362)
T 3goz_A 237 LHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSK 270 (362)
T ss_dssp CCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCH
T ss_pred CCcHHHHHHHHHHhcCCCccEEEeccCCccccCH
Confidence 9976553322 679999999999765443
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.8e-21 Score=178.41 Aligned_cols=162 Identities=20% Similarity=0.238 Sum_probs=103.2
Q ss_pred CccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCC
Q 048796 78 RLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSY 157 (555)
Q Consensus 78 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~ 157 (555)
+|++|+|++|++++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..+..+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l--------- 99 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKL--------- 99 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---------
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCc---------
Confidence 44445555554444444444445555555555555543333334455555555555555554333333333
Q ss_pred CCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEecc
Q 048796 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSY 237 (555)
Q Consensus 158 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~ 237 (555)
++|++|+|++|.|++..+..|..+++|+.|+|++|.+++..+..+..+++|+.|++++|.+.+..| .|+.|+++.
T Consensus 100 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~-----~l~~L~~~~ 174 (208)
T 2o6s_A 100 TQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-----GIRYLSEWI 174 (208)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT-----TTHHHHHHH
T ss_pred cCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC-----CHHHHHHHH
Confidence 666677777777776666667778888888888888887666667888888888888888876544 677888899
Q ss_pred CCCCCCcCccccCCCC
Q 048796 238 NDLSGPIPENLRNFPK 253 (555)
Q Consensus 238 N~l~~~~p~~l~~~~~ 253 (555)
|.++|.+|.++...+.
T Consensus 175 n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 175 NKHSGVVRNSAGSVAP 190 (208)
T ss_dssp HHCTTTBBCTTSSBCT
T ss_pred HhCCceeeccCccccC
Confidence 9999999887765543
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.1e-23 Score=208.56 Aligned_cols=235 Identities=22% Similarity=0.159 Sum_probs=179.6
Q ss_pred CCCCCEEECCCCcCCCCCC----C---CCC-CCCEEEcCCCcCCCCCcccccCC-----CCccEEEccCCcCCCCCCccc
Q 048796 7 STTLSVLNLSSNSLSGTLP----T---SLK-SCVILDLSRNMISGDISDMQNWE-----ANLEILDLSSNKLSGSLPNLT 73 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~----~---~l~-~L~~L~L~~N~l~~~~~~~~~~~-----~~L~~L~Ls~N~l~~~~~~~~ 73 (555)
.++|++|+|++|.|++..+ + .++ +|++|+|++|+|++.....+... ++|++|+|++|.+++..+..+
T Consensus 21 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l 100 (362)
T 3goz_A 21 PHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDEL 100 (362)
T ss_dssp CTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHH
Confidence 4569999999999997655 2 356 89999999999998765444442 789999999999997766644
Q ss_pred c----CC-CCccEEEeeCCcCCCCCchhc----cC-CCCccEEEcCCCcCCCCCc----hhhhCCC-CCCeEEccCCccc
Q 048796 74 S----QF-DRLSTFNIRNNSVTGTLPSLL----EI-SPRLVTLDVSSNQLKGPIP----DNFFSSM-ALTNLNLSGNGFS 138 (555)
Q Consensus 74 ~----~l-~~L~~L~L~~N~l~~~~~~~l----~~-l~~L~~L~L~~N~l~~~~~----~~~~~~~-~L~~L~Ls~N~l~ 138 (555)
. .+ ++|++|+|++|.|++..+..+ .. .++|++|+|++|+++.... ..+..++ +|+.|+|++|.++
T Consensus 101 ~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 101 VKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCc
Confidence 3 44 899999999999997766554 33 3699999999999985443 3445555 9999999999998
Q ss_pred ccCCcCccccccccccCCC-CCcCEEEccCCcCCCc----CCccccC-ccccceeecccccccCCCc----hhccCCCCC
Q 048796 139 GAIPLRSSHASELLVLPSY-PPMESLDLSGNALTGV----LPSDIGN-MGRLRLLNLANNHLSGKMP----SELSKLGAL 208 (555)
Q Consensus 139 ~~~p~~~~~~~~l~~l~~~-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~L~~N~l~~~~~----~~~~~l~~L 208 (555)
+..+..++.. +..+ ++|++|+|++|.|++. ++..+.. .++|+.|+|++|.|++..+ ..+..+++|
T Consensus 181 ~~~~~~l~~~-----l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L 255 (362)
T 3goz_A 181 SKNCAELAKF-----LASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHL 255 (362)
T ss_dssp GSCHHHHHHH-----HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTC
T ss_pred hhhHHHHHHH-----HHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCc
Confidence 7665544332 2233 4899999999999974 3344544 4599999999999997655 334678999
Q ss_pred CEEeCCCCcCCCCCChhh-------h--cCCCEEEeccCCCCCCcCc
Q 048796 209 EYLDLSGNQFKGEIPDKL-------S--LKLNEFNVSYNDLSGPIPE 246 (555)
Q Consensus 209 ~~L~Ls~N~l~~~~p~~~-------~--~~L~~L~ls~N~l~~~~p~ 246 (555)
+.|+|++|.+.+..+..+ . .+|+.||+++|++....+.
T Consensus 256 ~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~ 302 (362)
T 3goz_A 256 QTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSI 302 (362)
T ss_dssp SEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCH
T ss_pred cEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchH
Confidence 999999999775444322 1 4688999999999876443
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.3e-20 Score=197.84 Aligned_cols=221 Identities=27% Similarity=0.365 Sum_probs=161.4
Q ss_pred CCCCEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeC
Q 048796 8 TTLSVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRN 86 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 86 (555)
.+++.|++++|+|+ .+|.. .++|++|+|++|+|+.++. .+++|++|+|++|.|+ .+|. .+++|++|+|++
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~ 110 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLPAHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFS 110 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCCTTCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECS
T ss_pred CCCcEEEecCCCcC-ccChhhCCCCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcC
Confidence 36899999999999 56654 4689999999999997655 4578999999999998 4555 779999999999
Q ss_pred CcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccc-------c-CCCC
Q 048796 87 NSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLV-------L-PSYP 158 (555)
Q Consensus 87 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~-------l-~~~~ 158 (555)
|.|++. |. .+++|+.|++++|+++. +|.. +++|++|+|++|.+++ +|..+..+..+.. + ..++
T Consensus 111 N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~ 181 (622)
T 3g06_A 111 NPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPS 181 (622)
T ss_dssp CCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCT
T ss_pred CcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCC
Confidence 999964 33 57899999999999984 5553 4899999999999985 3433333322210 0 1236
Q ss_pred CcCEEEccCCcCCCcCCcccc-----------------CccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCC
Q 048796 159 PMESLDLSGNALTGVLPSDIG-----------------NMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGE 221 (555)
Q Consensus 159 ~L~~L~Ls~N~l~~~~p~~~~-----------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 221 (555)
+|+.|+|++|.|++. |..+. .+++|+.|+|++|.|++ +| ..+++|+.|+|++|.|+.
T Consensus 182 ~L~~L~Ls~N~l~~l-~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~- 255 (622)
T 3g06_A 182 GLQELSVSDNQLASL-PTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS- 255 (622)
T ss_dssp TCCEEECCSSCCSCC-CCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-
T ss_pred CCcEEECCCCCCCCC-CCccchhhEEECcCCcccccCCCCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-
Confidence 777777777777752 22211 12567777777777775 44 455778888888888884
Q ss_pred CChhhhcCCCEEEeccCCCCCCcCccccCCCCC
Q 048796 222 IPDKLSLKLNEFNVSYNDLSGPIPENLRNFPKS 254 (555)
Q Consensus 222 ~p~~~~~~L~~L~ls~N~l~~~~p~~l~~~~~~ 254 (555)
+|. ..++|+.|++++|.|+ .+|..+..++..
T Consensus 256 lp~-~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L 286 (622)
T 3g06_A 256 LPM-LPSGLLSLSVYRNQLT-RLPESLIHLSSE 286 (622)
T ss_dssp CCC-CCTTCCEEECCSSCCC-SCCGGGGGSCTT
T ss_pred CCc-ccccCcEEeCCCCCCC-cCCHHHhhcccc
Confidence 444 3367888888888888 667766665543
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-20 Score=189.85 Aligned_cols=225 Identities=16% Similarity=0.128 Sum_probs=180.3
Q ss_pred CCEEECCCCcCCCCCCCCC-CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCC-ccccCCCCccE-EEeeC
Q 048796 10 LSVLNLSSNSLSGTLPTSL-KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLP-NLTSQFDRLST-FNIRN 86 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~-L~L~~ 86 (555)
-++++.++++|+ .+|..+ +++++|+|++|+|+.++++.|..+++|++|+|++|.+.+.++ .+|.++++|.+ +.+..
T Consensus 11 ~~~v~C~~~~Lt-~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 11 NRVFLCQESKVT-EIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp TTEEEEESTTCC-SCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred CCEEEecCCCCC-ccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 367899999998 667665 589999999999999888899999999999999999876554 57889998776 56778
Q ss_pred CcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccC-CcccccCCcCccccccccccCCCCCcCEEEc
Q 048796 87 NSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSG-NGFSGAIPLRSSHASELLVLPSYPPMESLDL 165 (555)
Q Consensus 87 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~-N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~L 165 (555)
|+|+...+..|..+++|++|++++|++....+..+....++..|++.+ |.+....+..+..+. ..++.|+|
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~--------~~l~~L~L 161 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS--------FESVILWL 161 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB--------SSCEEEEC
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc--------hhhhhhcc
Confidence 999988889999999999999999999876666777777888999866 566655455554441 46889999
Q ss_pred cCCcCCCcCCccccCccccceeeccc-ccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCCCc
Q 048796 166 SGNALTGVLPSDIGNMGRLRLLNLAN-NHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPI 244 (555)
Q Consensus 166 s~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~~~ 244 (555)
++|.|+.+.+..| ...+|+.|++.+ |.++...++.|.++++|+.|||++|+|+ .+|.....+|+.|.+.+++--..+
T Consensus 162 ~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~~~L~~L~~l~~~~l~~l 239 (350)
T 4ay9_X 162 NKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARSTYNLKKL 239 (350)
T ss_dssp CSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSSSCTTCCEEECTTCTTCCCC
T ss_pred ccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccChhhhccchHhhhccCCCcCcC
Confidence 9999996655555 557899999975 7777655567899999999999999999 455554568888887776544445
Q ss_pred C
Q 048796 245 P 245 (555)
Q Consensus 245 p 245 (555)
|
T Consensus 240 P 240 (350)
T 4ay9_X 240 P 240 (350)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.84 E-value=5.4e-22 Score=200.15 Aligned_cols=221 Identities=21% Similarity=0.263 Sum_probs=181.3
Q ss_pred CCCCEEECCCCcCCCCCCCCC--CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCC-CCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPTSL--KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGS-LPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L 84 (555)
..++.|++++|.+.......+ ++++.|++++|.+.+..+..+ .+++|++|+|++|.+++. ++..+..+++|++|+|
T Consensus 47 ~~~~~l~l~~~~~~~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~-~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L 125 (336)
T 2ast_B 47 SLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHF-SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSL 125 (336)
T ss_dssp TTSSEEECTTCBCCHHHHHHHHHTTCSEEECTTCEECSCCCSCC-CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEEC
T ss_pred hhheeeccccccCCHHHHHhhhhccceEEEcCCccccccchhhc-cCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeC
Confidence 348899999999874333344 789999999999998877755 467899999999999865 7788899999999999
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCC-cCCC-CCchhhhCCCCCCeEEccCC-ccccc-CCcCccccccccccCCCC-C
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSN-QLKG-PIPDNFFSSMALTNLNLSGN-GFSGA-IPLRSSHASELLVLPSYP-P 159 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N-~l~~-~~~~~~~~~~~L~~L~Ls~N-~l~~~-~p~~~~~~~~l~~l~~~~-~ 159 (555)
++|.+++..+..+..+++|++|+|++| .+++ .++..+..+++|+.|++++| .+++. ++..+..+ + +
T Consensus 126 ~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l---------~~~ 196 (336)
T 2ast_B 126 EGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHV---------SET 196 (336)
T ss_dssp TTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHS---------CTT
T ss_pred cCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhc---------ccC
Confidence 999999888888999999999999999 6764 25667888999999999999 88753 34434444 7 9
Q ss_pred cCEEEccCC--cCC-CcCCccccCccccceeeccccc-ccCCCchhccCCCCCCEEeCCCCc-CCCCCChhhh--cCCCE
Q 048796 160 MESLDLSGN--ALT-GVLPSDIGNMGRLRLLNLANNH-LSGKMPSELSKLGALEYLDLSGNQ-FKGEIPDKLS--LKLNE 232 (555)
Q Consensus 160 L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~--~~L~~ 232 (555)
|++|+|++| .++ +.++..+..+++|+.|+|++|. +++..+..+..+++|+.|++++|. ++......+. ++|+.
T Consensus 197 L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~ 276 (336)
T 2ast_B 197 ITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKT 276 (336)
T ss_dssp CCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred CCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCE
Confidence 999999999 565 4556677889999999999999 777778889999999999999996 3222111333 78999
Q ss_pred EEeccC
Q 048796 233 FNVSYN 238 (555)
Q Consensus 233 L~ls~N 238 (555)
|++++|
T Consensus 277 L~l~~~ 282 (336)
T 2ast_B 277 LQVFGI 282 (336)
T ss_dssp EECTTS
T ss_pred EeccCc
Confidence 999998
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.6e-20 Score=198.32 Aligned_cols=185 Identities=26% Similarity=0.365 Sum_probs=155.3
Q ss_pred CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcC
Q 048796 30 SCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVS 109 (555)
Q Consensus 30 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 109 (555)
+|+.|+|++|+|++++..++ ++|+.|+|++|.|+ .+| ..+++|++|+|++|+|++ +|. +.. +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~---~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLP---PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCC---TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCccCHhHc---CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 79999999999998665554 57999999999999 566 457999999999999997 666 654 99999999
Q ss_pred CCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeec
Q 048796 110 SNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNL 189 (555)
Q Consensus 110 ~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 189 (555)
+|+|++ +|. .+++|+.|+|++|.|++ +|. . +++|++|+|++|.|++ +|. |. ++|+.|+|
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~---------l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~L 187 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---L---------PTSLEVLSVRNNQLTF-LPE-LP--ESLEALDV 187 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---C---------CTTCCEEECCSSCCSC-CCC-CC--TTCCEEEC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---c---------CCCcCEEECCCCCCCC-cch-hh--CCCCEEEC
Confidence 999996 666 68999999999999986 453 2 2889999999999997 555 66 89999999
Q ss_pred ccccccCCCchhccCCCCC-------CEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccCC
Q 048796 190 ANNHLSGKMPSELSKLGAL-------EYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNF 251 (555)
Q Consensus 190 ~~N~l~~~~~~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~ 251 (555)
++|+|+ .+|. +.. +| +.|+|++|+|+ .+|..+. ++|+.|++++|+|++.+|..+..+
T Consensus 188 s~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 188 STNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred cCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 999999 5666 554 77 99999999999 5777665 799999999999999988776543
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-20 Score=186.16 Aligned_cols=168 Identities=22% Similarity=0.298 Sum_probs=96.7
Q ss_pred CCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEE
Q 048796 52 EANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLN 131 (555)
Q Consensus 52 ~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ 131 (555)
+++|+.|++++|.++.. + .+..+++|++|+|++|++++..+ +..+++|+.|+|++|++++ ++ .+..+++|+.|+
T Consensus 45 l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~ 118 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (291)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred cCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 34456666666655532 2 24555666666666666654333 5556666666666666653 22 355566666666
Q ss_pred ccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEE
Q 048796 132 LSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYL 211 (555)
Q Consensus 132 Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 211 (555)
|++|.+++. ..+.. +++|+.|+|++|.+++. ..+..+++|+.|+|++|.|++..+ +..+++|+.|
T Consensus 119 L~~n~i~~~--~~l~~---------l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L 183 (291)
T 1h6t_A 119 LEHNGISDI--NGLVH---------LPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNL 183 (291)
T ss_dssp CTTSCCCCC--GGGGG---------CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred CCCCcCCCC--hhhcC---------CCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEE
Confidence 666665532 11222 25666666666666654 456666667777777776665433 6666677777
Q ss_pred eCCCCcCCCCCChhhh--cCCCEEEeccCCCCC
Q 048796 212 DLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSG 242 (555)
Q Consensus 212 ~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~ 242 (555)
++++|.|++. +. +. ++|+.|++++|+++.
T Consensus 184 ~L~~N~i~~l-~~-l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 184 YLSKNHISDL-RA-LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp ECCSSCCCBC-GG-GTTCTTCSEEEEEEEEEEC
T ss_pred ECCCCcCCCC-hh-hccCCCCCEEECcCCcccC
Confidence 7777766643 32 22 567777777776654
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-20 Score=204.52 Aligned_cols=193 Identities=21% Similarity=0.278 Sum_probs=148.4
Q ss_pred CCCCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 6 NSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++.++..++|..+.++...+ ..+.+|+.|+|++|.|..+. .+..+++|+.|+|++|.|++..+ +..+++|+.|+|
T Consensus 19 ~l~~l~~l~l~~~~i~~~~~~~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 19 AFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHHHTTCSCTTSEECHHHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHHHHhccCCCcccccchhcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 34456666777777775544 34778888888888887654 35667788999999988886544 788888999999
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~ 164 (555)
++|.|.+. + .+..+++|+.|+|++|+|++ + ..+..+++|+.|+|++|.+++. ..+. .+++|+.|+
T Consensus 95 s~N~l~~l-~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~---------~l~~L~~L~ 159 (605)
T 1m9s_A 95 DENKIKDL-S-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLS---------RLTKLDTLS 159 (605)
T ss_dssp CSSCCCCC-T-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGG---------SCTTCSEEE
T ss_pred cCCCCCCC-h-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhc---------ccCCCCEEE
Confidence 98888853 3 67888889999999888875 3 4578888889999988888754 2233 348888889
Q ss_pred ccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCC
Q 048796 165 LSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGE 221 (555)
Q Consensus 165 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 221 (555)
|++|.|++..| +..+++|+.|+|++|.|++. ..+..+++|+.|+|++|.+++.
T Consensus 160 Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 160 LEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred CcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 99888887655 88888889999998888864 3578888889999988888754
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.82 E-value=9.3e-22 Score=202.51 Aligned_cols=210 Identities=20% Similarity=0.263 Sum_probs=168.2
Q ss_pred cCCCCCCEEECCCCc---CCCCCC----------CCCCCCCEEEcCCCcCCCC----CcccccCCCCccEEEccCCcCCC
Q 048796 5 INSTTLSVLNLSSNS---LSGTLP----------TSLKSCVILDLSRNMISGD----ISDMQNWEANLEILDLSSNKLSG 67 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~---l~~~~~----------~~l~~L~~L~L~~N~l~~~----~~~~~~~~~~L~~L~Ls~N~l~~ 67 (555)
.++++|++|+|++|. +++.+| ..+++|++|+|++|.|+.. .+..+..+++|++|+|++|.+++
T Consensus 57 ~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~ 136 (386)
T 2ca6_A 57 ASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGP 136 (386)
T ss_dssp TTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHH
T ss_pred HhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCH
Confidence 468899999999974 444555 3568999999999999873 34566777899999999999975
Q ss_pred CCCccc----cCC---------CCccEEEeeCCcCC-CCCc---hhccCCCCccEEEcCCCcCCC-----CCchhhhCCC
Q 048796 68 SLPNLT----SQF---------DRLSTFNIRNNSVT-GTLP---SLLEISPRLVTLDVSSNQLKG-----PIPDNFFSSM 125 (555)
Q Consensus 68 ~~~~~~----~~l---------~~L~~L~L~~N~l~-~~~~---~~l~~l~~L~~L~L~~N~l~~-----~~~~~~~~~~ 125 (555)
..+..+ ..+ ++|++|+|++|+++ ..++ ..+..+++|++|+|++|+++. ..+..+..++
T Consensus 137 ~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~ 216 (386)
T 2ca6_A 137 QAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQ 216 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCT
T ss_pred HHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCC
Confidence 433333 334 89999999999997 3444 467788999999999999972 3344788899
Q ss_pred CCCeEEccCCccc----ccCCcCccccccccccCCCCCcCEEEccCCcCCCc----CCcccc--Cccccceeeccccccc
Q 048796 126 ALTNLNLSGNGFS----GAIPLRSSHASELLVLPSYPPMESLDLSGNALTGV----LPSDIG--NMGRLRLLNLANNHLS 195 (555)
Q Consensus 126 ~L~~L~Ls~N~l~----~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~----~p~~~~--~l~~L~~L~L~~N~l~ 195 (555)
+|+.|+|++|.++ ..+|..+..+ ++|++|+|++|.|++. ++..+. .+++|+.|+|++|.|+
T Consensus 217 ~L~~L~Ls~n~l~~~g~~~l~~~l~~~---------~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~ 287 (386)
T 2ca6_A 217 ELKVLDLQDNTFTHLGSSALAIALKSW---------PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE 287 (386)
T ss_dssp TCCEEECCSSCCHHHHHHHHHHHGGGC---------TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCB
T ss_pred CccEEECcCCCCCcHHHHHHHHHHccC---------CCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCC
Confidence 9999999999996 4455555544 8999999999999876 455563 4899999999999999
Q ss_pred C----CCchhc-cCCCCCCEEeCCCCcCCCCCC
Q 048796 196 G----KMPSEL-SKLGALEYLDLSGNQFKGEIP 223 (555)
Q Consensus 196 ~----~~~~~~-~~l~~L~~L~Ls~N~l~~~~p 223 (555)
+ .+|..+ .++++|++|++++|.+++..+
T Consensus 288 ~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 288 LDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 7 477777 668999999999999998775
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.82 E-value=5e-20 Score=187.75 Aligned_cols=178 Identities=25% Similarity=0.223 Sum_probs=117.8
Q ss_pred CEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCcccc-CCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCC
Q 048796 32 VILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTS-QFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSS 110 (555)
Q Consensus 32 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 110 (555)
+.+++++|+|+.++..+. ..|+.|+|++|.|++..+..+. .+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~~iP~~~~---~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPNVPQSLP---SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSSCCSSCC---TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCccCccCC---CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 456666666665544332 2466666666666655555555 666777777777777666556666677777777777
Q ss_pred CcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccc---cCcccccee
Q 048796 111 NQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDI---GNMGRLRLL 187 (555)
Q Consensus 111 N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L 187 (555)
|+|+...+..|..+.+|+.|+|++|.|++..+..|..+ ++|+.|+|++|.|++..+..| ..+++|+.|
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l---------~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L 168 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDM---------AQLQKLYLSQNQISRFPVELIKDGNKLPKLMLL 168 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC---------TTCCEEECCSSCCCSCCGGGTC----CTTCCEE
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCc---------ccCCEEECCCCcCCeeCHHHhcCcccCCcCCEE
Confidence 77765555566667777777777777766555555554 677777777777776544444 457788888
Q ss_pred ecccccccCCCchhccCCCC--CCEEeCCCCcCCCC
Q 048796 188 NLANNHLSGKMPSELSKLGA--LEYLDLSGNQFKGE 221 (555)
Q Consensus 188 ~L~~N~l~~~~~~~~~~l~~--L~~L~Ls~N~l~~~ 221 (555)
+|++|+|+...+..+..++. |+.|+|++|.+...
T Consensus 169 ~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 169 DLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp ECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred ECCCCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 88888888666667777766 47788888888743
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.82 E-value=6.2e-22 Score=208.61 Aligned_cols=229 Identities=19% Similarity=0.157 Sum_probs=133.8
Q ss_pred cCCCCCCEEECCCCcCCCCCC--------CCCCCCCEEEcCCCcCCCCC----cccccCCCCccEEEccCCcCCCCCCcc
Q 048796 5 INSTTLSVLNLSSNSLSGTLP--------TSLKSCVILDLSRNMISGDI----SDMQNWEANLEILDLSSNKLSGSLPNL 72 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~--------~~l~~L~~L~L~~N~l~~~~----~~~~~~~~~L~~L~Ls~N~l~~~~~~~ 72 (555)
.++++|++|+|++|.+++..+ ...++|++|+|++|++++.. +..+..+++|++|+|++|.+++..+..
T Consensus 110 ~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 189 (461)
T 1z7x_W 110 RTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRV 189 (461)
T ss_dssp TSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHH
T ss_pred ccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHH
Confidence 466788888888888764222 22446888888888877543 334445567888888887776433333
Q ss_pred cc-----CCCCccEEEeeCCcCCCC----CchhccCCCCccEEEcCCCcCCCCC-----chhhhCCCCCCeEEccCCccc
Q 048796 73 TS-----QFDRLSTFNIRNNSVTGT----LPSLLEISPRLVTLDVSSNQLKGPI-----PDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 73 ~~-----~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~-----~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
+. .+++|++|+|++|.++.. ++..+..+++|++|+|++|.++... +..+..+++|+.|++++|.++
T Consensus 190 l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~ 269 (461)
T 1z7x_W 190 LCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGIT 269 (461)
T ss_dssp HHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCC
Confidence 32 245777777777777653 3555666777777777777765322 111224667777777777766
Q ss_pred cc----CCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccC-----ccccceeecccccccCC----CchhccCC
Q 048796 139 GA----IPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN-----MGRLRLLNLANNHLSGK----MPSELSKL 205 (555)
Q Consensus 139 ~~----~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~----~~~~~~~l 205 (555)
.. ++..+..+ ++|++|+|++|.+++..+..+.. .++|+.|+|++|.+++. ++..+..+
T Consensus 270 ~~~~~~l~~~l~~~---------~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 340 (461)
T 1z7x_W 270 AKGCGDLCRVLRAK---------ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQN 340 (461)
T ss_dssp HHHHHHHHHHHHHC---------TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhC---------CCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhC
Confidence 43 22222222 56666666666665433333322 14666666666666543 33444555
Q ss_pred CCCCEEeCCCCcCCCCCChhhh-------cCCCEEEeccCCCCC
Q 048796 206 GALEYLDLSGNQFKGEIPDKLS-------LKLNEFNVSYNDLSG 242 (555)
Q Consensus 206 ~~L~~L~Ls~N~l~~~~p~~~~-------~~L~~L~ls~N~l~~ 242 (555)
++|++|++++|.+++..+..+. ++|+.|++++|.+++
T Consensus 341 ~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 341 RFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp SSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred CCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 6666666666666544333222 256666666666654
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.8e-20 Score=174.23 Aligned_cols=135 Identities=20% Similarity=0.279 Sum_probs=73.5
Q ss_pred cEEEeeCCcCCCCCc-hhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCC
Q 048796 80 STFNIRNNSVTGTLP-SLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYP 158 (555)
Q Consensus 80 ~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~ 158 (555)
++|+|++|.|++..+ ..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+++..+..+..+ +
T Consensus 35 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---------~ 105 (220)
T 2v70_A 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGL---------E 105 (220)
T ss_dssp SEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTC---------S
T ss_pred CEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCC---------c
Confidence 344444444443322 223444444444444444443333344444444444444444444333333333 5
Q ss_pred CcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCC
Q 048796 159 PMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIP 223 (555)
Q Consensus 159 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 223 (555)
+|++|+|++|.|++..|..|..+++|+.|+|++|.|++..|..|..+++|+.|+|++|.+++..+
T Consensus 106 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 106 SLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 55555666666665556666667777777777777776667777777777777777777775544
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.82 E-value=7e-20 Score=173.08 Aligned_cols=135 Identities=22% Similarity=0.295 Sum_probs=77.7
Q ss_pred CccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCC
Q 048796 78 RLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSY 157 (555)
Q Consensus 78 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~ 157 (555)
+|++|+|++|.|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|.|+...+..|..+
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l--------- 103 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGL--------- 103 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTC---------
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCC---------
Confidence 44444444444444333444444445555555554444444444445555555555555543333333333
Q ss_pred CCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCC
Q 048796 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGE 221 (555)
Q Consensus 158 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 221 (555)
++|++|+|++|.|++..|..|..+++|+.|+|++|.|++..+..|..+++|+.|+|++|.+...
T Consensus 104 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 104 FSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 5666666666666666666677777777777777777766666677777777777777777643
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.81 E-value=6.7e-20 Score=186.75 Aligned_cols=178 Identities=24% Similarity=0.217 Sum_probs=139.5
Q ss_pred ccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhcc-CCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEcc
Q 048796 55 LEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLE-ISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLS 133 (555)
Q Consensus 55 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls 133 (555)
-+.+++++|.++ .+|..+. ..++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..+..|..+++|+.|+|+
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 467888888888 4565443 4588899999998877777777 88899999999999887777788888899999999
Q ss_pred CCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhc---cCCCCCCE
Q 048796 134 GNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSEL---SKLGALEY 210 (555)
Q Consensus 134 ~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~ 210 (555)
+|.|+...+..|..+ ++|++|+|++|.|++..+..|..+++|+.|+|++|.|++..+..| ..+++|+.
T Consensus 97 ~N~l~~~~~~~~~~l---------~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~ 167 (361)
T 2xot_A 97 SNHLHTLDEFLFSDL---------QALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLML 167 (361)
T ss_dssp SSCCCEECTTTTTTC---------TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCE
T ss_pred CCcCCcCCHHHhCCC---------cCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCE
Confidence 998887666666655 888999999999988888888888999999999999986555555 56888999
Q ss_pred EeCCCCcCCCCCChhhh--cC--CCEEEeccCCCCCCc
Q 048796 211 LDLSGNQFKGEIPDKLS--LK--LNEFNVSYNDLSGPI 244 (555)
Q Consensus 211 L~Ls~N~l~~~~p~~~~--~~--L~~L~ls~N~l~~~~ 244 (555)
|||++|+|+...+..+. +. ++.|++++|++.|.+
T Consensus 168 L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 168 LDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp EECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred EECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 99999998855444444 22 477899999988764
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.8e-19 Score=168.89 Aligned_cols=152 Identities=20% Similarity=0.190 Sum_probs=86.2
Q ss_pred EEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCC-ccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCC
Q 048796 33 ILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLP-NLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSN 111 (555)
Q Consensus 33 ~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 111 (555)
.+++++|.++.++..+. ..+++|+|++|.|++..+ ..|..+++|++|+|++|.|++..+..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~iP~~~~---~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNKIPEHIP---QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSSCCSCCC---TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcccCccCCC---CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 44555555544332221 134555555555554422 33455555555555555555555555555566666666666
Q ss_pred cCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeeccc
Q 048796 112 QLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLAN 191 (555)
Q Consensus 112 ~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 191 (555)
++++..+..|..+++|+.|+|++|.|++..|..+..+ ++|++|+|++|.|++..|..|..+++|+.|+|++
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 162 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGL---------SSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLA 162 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTC---------TTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCC---------ccCCEEECCCCcCCEECHHHhcCCCCCCEEEecC
Confidence 6655555555556666666666666665555555444 5666666666666666666666667777777777
Q ss_pred ccccC
Q 048796 192 NHLSG 196 (555)
Q Consensus 192 N~l~~ 196 (555)
|.+..
T Consensus 163 N~l~c 167 (220)
T 2v70_A 163 NPFNC 167 (220)
T ss_dssp CCEEC
T ss_pred cCCcC
Confidence 76654
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.81 E-value=5.9e-22 Score=208.77 Aligned_cols=235 Identities=21% Similarity=0.196 Sum_probs=179.1
Q ss_pred CCCEEECCCCcCCC----CCC---CCCCCCCEEEcCCCcCCCCCcc-----cccCCCCccEEEccCCcCCCC----CCcc
Q 048796 9 TLSVLNLSSNSLSG----TLP---TSLKSCVILDLSRNMISGDISD-----MQNWEANLEILDLSSNKLSGS----LPNL 72 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~----~~~---~~l~~L~~L~L~~N~l~~~~~~-----~~~~~~~L~~L~Ls~N~l~~~----~~~~ 72 (555)
+|++|+|++|+++. .++ ..+++|++|+|++|.+++.... .....++|++|+|++|.+++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 79999999999984 233 4567899999999999754322 233355799999999999864 3556
Q ss_pred ccCCCCccEEEeeCCcCCCCCchhcc-----CCCCccEEEcCCCcCCCC----CchhhhCCCCCCeEEccCCcccccCCc
Q 048796 73 TSQFDRLSTFNIRNNSVTGTLPSLLE-----ISPRLVTLDVSSNQLKGP----IPDNFFSSMALTNLNLSGNGFSGAIPL 143 (555)
Q Consensus 73 ~~~l~~L~~L~L~~N~l~~~~~~~l~-----~l~~L~~L~L~~N~l~~~----~~~~~~~~~~L~~L~Ls~N~l~~~~p~ 143 (555)
+..+++|++|+|++|.++...+..+. ..++|++|+|++|.++.. ++..+..+++|+.|+|++|.+++....
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 67789999999999999865444443 367999999999999864 477788899999999999998754221
Q ss_pred CccccccccccCCCCCcCEEEccCCcCCCc----CCccccCccccceeecccccccCCCchhccC-----CCCCCEEeCC
Q 048796 144 RSSHASELLVLPSYPPMESLDLSGNALTGV----LPSDIGNMGRLRLLNLANNHLSGKMPSELSK-----LGALEYLDLS 214 (555)
Q Consensus 144 ~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~Ls 214 (555)
.+... ....+++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++..+..+.. .++|+.|+++
T Consensus 246 ~l~~~----~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 246 ELCPG----LLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHH----HTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHH----HhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 11110 011248999999999999964 5666778999999999999998654444432 3699999999
Q ss_pred CCcCCCCC----Chhhh--cCCCEEEeccCCCCCCcCcc
Q 048796 215 GNQFKGEI----PDKLS--LKLNEFNVSYNDLSGPIPEN 247 (555)
Q Consensus 215 ~N~l~~~~----p~~~~--~~L~~L~ls~N~l~~~~p~~ 247 (555)
+|.+++.. +..+. ++|+.|++++|.+++..+..
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~ 360 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRE 360 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHH
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHH
Confidence 99999653 33333 78999999999998765443
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.80 E-value=5.7e-19 Score=166.77 Aligned_cols=151 Identities=17% Similarity=0.199 Sum_probs=79.5
Q ss_pred EEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCc
Q 048796 33 ILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ 112 (555)
Q Consensus 33 ~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 112 (555)
.+++++|.++.++.... ++|+.|+|++|.|++..+..|..+++|++|+|++|.|++..|..|..+++|++|+|++|+
T Consensus 15 ~v~c~~~~l~~iP~~l~---~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLTEIPTNLP---ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCSSCCSSCC---TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcCcCCCccC---cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 34444444443332221 235555555555554444445555555555555555554445555555555555555555
Q ss_pred CCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccc
Q 048796 113 LKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANN 192 (555)
Q Consensus 113 l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 192 (555)
|+...+..|..+++|+.|+|++|.|++..+..+..+ ++|++|+|++|.|++..+..|..+++|+.|+|++|
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l---------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 162 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDL---------HNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---------TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCC---------CCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCC
Confidence 553333334455555555555555555444444443 55666666666666555555666666666666666
Q ss_pred ccc
Q 048796 193 HLS 195 (555)
Q Consensus 193 ~l~ 195 (555)
.+.
T Consensus 163 ~~~ 165 (220)
T 2v9t_B 163 PFI 165 (220)
T ss_dssp CEE
T ss_pred CcC
Confidence 664
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-19 Score=184.70 Aligned_cols=226 Identities=15% Similarity=0.093 Sum_probs=172.4
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCC-CCcccccCCCCccE-EEccCCcCCCCCCccccCCCCccEE
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISG-DISDMQNWEANLEI-LDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~-~~~~~~~~~~~L~~-L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
++|++|+|++|+|+.+.++ .+++|++|+|++|++.+ +..+.|..+++|++ +++.+|+|+...+..|..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 5799999999999965444 46789999999999865 44678888877765 6777899998888999999999999
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCC-CcCCCCCchhhhCCC-CCCeEEccCCcccccCCcCccccccccccCCCCCc
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSS-NQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPM 160 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L 160 (555)
++++|+|+...+..+....++..|++.+ |++....+..|..+. .++.|+|++|+|+...+..+ .. .+|
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~---------~~L 179 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAF-NG---------TQL 179 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSS-TT---------EEE
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhc-cc---------cch
Confidence 9999999977777777778899999965 667654455666654 68999999999985444333 33 578
Q ss_pred CEEEccC-CcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEeccC
Q 048796 161 ESLDLSG-NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSYN 238 (555)
Q Consensus 161 ~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~N 238 (555)
+.|++++ |.++.+.+..|..+++|+.|||++|+|+...+.. +.+|+.|.+.++.--..+|..-. ++|+.++++++
T Consensus 180 ~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~---~~~L~~L~~l~~~~l~~lP~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 180 DELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG---LENLKKLRARSTYNLKKLPTLEKLVALMEASLTYP 256 (350)
T ss_dssp EEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS---CTTCCEEECTTCTTCCCCCCTTTCCSCCEEECSCH
T ss_pred hHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh---hccchHhhhccCCCcCcCCCchhCcChhhCcCCCC
Confidence 9999975 6777666677999999999999999999654444 45666666655543335664222 78999999877
Q ss_pred CCCCCcCc
Q 048796 239 DLSGPIPE 246 (555)
Q Consensus 239 ~l~~~~p~ 246 (555)
..++....
T Consensus 257 ~~c~~~~~ 264 (350)
T 4ay9_X 257 SHCCAFAN 264 (350)
T ss_dssp HHHHHHHH
T ss_pred ccccchhh
Confidence 65544433
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.9e-19 Score=176.31 Aligned_cols=190 Identities=21% Similarity=0.282 Sum_probs=156.9
Q ss_pred CCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeC
Q 048796 8 TTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRN 86 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 86 (555)
.++..+++..+.+++..+ ..+++|+.|++++|.++... .+..+++|+.|+|++|.+++..+ +..+++|++|+|++
T Consensus 24 ~~~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 24 AETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHHHTTCSCTTSEECHHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHHHhcCCCcccccchhhcCcccEEEccCCCcccCh--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 344556677777775433 45788999999999998763 26667889999999999986544 89999999999999
Q ss_pred CcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEcc
Q 048796 87 NSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLS 166 (555)
Q Consensus 87 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls 166 (555)
|.+++. + .+..+++|++|+|++|++++. ..+..+++|+.|++++|.+++. ..+.. +++|+.|+|+
T Consensus 100 n~l~~~-~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~---------l~~L~~L~L~ 164 (291)
T 1h6t_A 100 NKVKDL-S-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSR---------LTKLDTLSLE 164 (291)
T ss_dssp SCCCCG-G-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGG---------CTTCSEEECC
T ss_pred CcCCCC-h-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhcc---------CCCCCEEEcc
Confidence 999863 3 488999999999999999853 5688899999999999999864 23333 4899999999
Q ss_pred CCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCC
Q 048796 167 GNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKG 220 (555)
Q Consensus 167 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 220 (555)
+|.+++..+ +..+++|+.|+|++|.|++ ++ .+..+++|+.|++++|+++.
T Consensus 165 ~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 165 DNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 999997655 8899999999999999996 44 48899999999999999985
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.7e-18 Score=163.26 Aligned_cols=153 Identities=18% Similarity=0.213 Sum_probs=92.1
Q ss_pred CEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCC
Q 048796 32 VILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSN 111 (555)
Q Consensus 32 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 111 (555)
+.++++++.++.++.... ++|++|+|++|.|++..+..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|
T Consensus 22 ~~v~c~~~~l~~ip~~~~---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHASVPAGIP---TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCSSCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcCccCCCCC---CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 345555555554443322 35666666666666555555666666666666666665544455566666666666666
Q ss_pred cCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeeccc
Q 048796 112 QLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLAN 191 (555)
Q Consensus 112 ~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 191 (555)
+|++..+..|..+++|+.|+|++|.|+ .+|..+..+ ++|++|+|++|.|++..+..|..+++|+.|+|++
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l---------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 168 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERL---------THLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFG 168 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGC---------TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccC---------CCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeC
Confidence 666544445556666666666666665 444444443 6666677777776666556667777777777777
Q ss_pred ccccCC
Q 048796 192 NHLSGK 197 (555)
Q Consensus 192 N~l~~~ 197 (555)
|.+...
T Consensus 169 N~~~c~ 174 (229)
T 3e6j_A 169 NPWDCE 174 (229)
T ss_dssp SCBCTT
T ss_pred CCccCC
Confidence 777643
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.79 E-value=7.8e-19 Score=189.91 Aligned_cols=175 Identities=18% Similarity=0.229 Sum_probs=150.6
Q ss_pred cCCCCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 5 INSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
.++++|+.|+|++|.|..... ..+++|+.|+|++|.|+++.+ +..+++|+.|+|++|.|++ ++ .+..+++|++|+
T Consensus 40 ~~L~~L~~L~l~~n~i~~l~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp HHHTTCCCCBCTTCCCCCCTTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred hcCCCCCEEECcCCCCCCChHHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 356789999999999985422 457899999999999998776 7788899999999999985 33 689999999999
Q ss_pred eeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEE
Q 048796 84 IRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESL 163 (555)
Q Consensus 84 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L 163 (555)
|++|.|.+. ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.|.+..| +..+ ++|+.|
T Consensus 116 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l---------~~L~~L 180 (605)
T 1m9s_A 116 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGL---------TKLQNL 180 (605)
T ss_dssp CTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTC---------TTCCEE
T ss_pred ecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccC---------CCCCEE
Confidence 999999964 4588999999999999999865 678999999999999999987655 4444 999999
Q ss_pred EccCCcCCCcCCccccCccccceeecccccccCCCch
Q 048796 164 DLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPS 200 (555)
Q Consensus 164 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 200 (555)
+|++|.|++. ..+..+++|+.|+|++|.+.+....
T Consensus 181 ~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~ 215 (605)
T 1m9s_A 181 YLSKNHISDL--RALAGLKNLDVLELFSQECLNKPIN 215 (605)
T ss_dssp ECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCC
T ss_pred ECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCccc
Confidence 9999999975 4689999999999999999865433
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.7e-18 Score=163.25 Aligned_cols=157 Identities=24% Similarity=0.241 Sum_probs=133.4
Q ss_pred CccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEcc
Q 048796 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLS 133 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls 133 (555)
..+.++.+++.++ .+|..+. ++|++|+|++|.|++..+..|..+++|+.|+|++|+|+...+..|..+++|+.|+|+
T Consensus 20 s~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 20 SGTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred eCCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 3678999999988 5565443 789999999999998888889999999999999999986666677889999999999
Q ss_pred CCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeC
Q 048796 134 GNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDL 213 (555)
Q Consensus 134 ~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 213 (555)
+|.|++..+..+..+ ++|++|+|++|.|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 97 ~N~l~~l~~~~~~~l---------~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 166 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRL---------VHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYL 166 (229)
T ss_dssp SSCCCCCCTTTTTTC---------TTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCcCCccChhHhCcc---------hhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEe
Confidence 999987766656655 88999999999999 66788889999999999999999777778889999999999
Q ss_pred CCCcCCCCCC
Q 048796 214 SGNQFKGEIP 223 (555)
Q Consensus 214 s~N~l~~~~p 223 (555)
++|.+++..+
T Consensus 167 ~~N~~~c~c~ 176 (229)
T 3e6j_A 167 FGNPWDCECR 176 (229)
T ss_dssp TTSCBCTTBG
T ss_pred eCCCccCCcc
Confidence 9999987654
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-18 Score=159.00 Aligned_cols=152 Identities=18% Similarity=0.214 Sum_probs=97.5
Q ss_pred CCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEE
Q 048796 52 EANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLN 131 (555)
Q Consensus 52 ~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ 131 (555)
+++|+.|++++|.++ .++ .+..+++|++|++++|.++.. ..+..+++|++|++++|++++..+..+..+++|+.|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC--GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc--hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 345677777777666 344 466666777777777755422 3566667777777777777655566666677777777
Q ss_pred ccCCcccccCCcCccccccccccCCCCCcCEEEccCCc-CCCcCCccccCccccceeecccccccCCCchhccCCCCCCE
Q 048796 132 LSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNA-LTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEY 210 (555)
Q Consensus 132 Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 210 (555)
|++|.+++..+..+..+ ++|++|+|++|. ++. ++ .+..+++|+.|++++|.+++. + .+..+++|+.
T Consensus 119 Ls~n~i~~~~~~~l~~l---------~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~ 185 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTL---------PKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQ 185 (197)
T ss_dssp CCSSBCBGGGHHHHTTC---------SSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCE
T ss_pred ecCCccCcHhHHHHhhC---------CCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCE
Confidence 77777765544444443 677777777776 543 33 577777788888888877753 3 6677778888
Q ss_pred EeCCCCcCCC
Q 048796 211 LDLSGNQFKG 220 (555)
Q Consensus 211 L~Ls~N~l~~ 220 (555)
|++++|+|.+
T Consensus 186 L~l~~N~i~~ 195 (197)
T 4ezg_A 186 LYAFSQTIGG 195 (197)
T ss_dssp EEECBC----
T ss_pred EEeeCcccCC
Confidence 8888887753
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-18 Score=169.10 Aligned_cols=169 Identities=21% Similarity=0.354 Sum_probs=110.7
Q ss_pred CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEc
Q 048796 29 KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDV 108 (555)
Q Consensus 29 ~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L 108 (555)
.++..+++++|.+++.. .+..+++|+.|++++|.++. ++ .+..+++|++|+|++|.|++..+ +..+++|+.|+|
T Consensus 19 ~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 34455566666665443 23445567777777777663 33 46667777777777777765443 667777777777
Q ss_pred CCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceee
Q 048796 109 SSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLN 188 (555)
Q Consensus 109 ~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 188 (555)
++|++++ ++. +.. .+|+.|+|++|.+++. + .+. .+++|+.|+|++|.|++. ..+..+++|+.|+
T Consensus 93 ~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~-~-~l~---------~l~~L~~L~Ls~N~i~~~--~~l~~l~~L~~L~ 156 (263)
T 1xeu_A 93 NRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT-D-SLI---------HLKNLEILSIRNNKLKSI--VMLGFLSKLEVLD 156 (263)
T ss_dssp CSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS-G-GGT---------TCTTCCEEECTTSCCCBC--GGGGGCTTCCEEE
T ss_pred CCCccCC-cCc-ccc-CcccEEEccCCccCCC-h-hhc---------CcccccEEECCCCcCCCC--hHHccCCCCCEEE
Confidence 7777764 332 222 6777777777777642 1 222 337777777877777754 2577778888888
Q ss_pred cccccccCCCchhccCCCCCCEEeCCCCcCCCC
Q 048796 189 LANNHLSGKMPSELSKLGALEYLDLSGNQFKGE 221 (555)
Q Consensus 189 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 221 (555)
|++|.|++. ..+..+++|+.|++++|.+++.
T Consensus 157 L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 157 LHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 888888765 5677788888888888887754
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.75 E-value=4.5e-18 Score=157.00 Aligned_cols=141 Identities=23% Similarity=0.258 Sum_probs=88.9
Q ss_pred CccEEEcCCCcCCCCCch-hhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccC
Q 048796 102 RLVTLDVSSNQLKGPIPD-NFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN 180 (555)
Q Consensus 102 ~L~~L~L~~N~l~~~~~~-~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~ 180 (555)
+|++|+|++|+|++..+. .|..+++|+.|+|++|.|++..|..+..+ ++|++|+|++|.|++..+..|..
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---------~~L~~L~Ls~N~l~~~~~~~~~~ 100 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGA---------SHIQELQLGENKIKEISNKMFLG 100 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTC---------TTCCEEECCSCCCCEECSSSSTT
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCc---------ccCCEEECCCCcCCccCHHHhcC
Confidence 455555555555433332 24555555555555555555555544444 66666666666666666667777
Q ss_pred ccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEeccCCCCCCcCccccCC
Q 048796 181 MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSYNDLSGPIPENLRNF 251 (555)
Q Consensus 181 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~N~l~~~~p~~l~~~ 251 (555)
+++|+.|+|++|+|++..|..+..+++|++|+|++|.+++..+..+. ..++...+..+...|..|..+.+.
T Consensus 101 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~~l~~~ 172 (192)
T 1w8a_A 101 LHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRDV 172 (192)
T ss_dssp CTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSSTTTTTS
T ss_pred CCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCChHHcCC
Confidence 78888888888888877788888888888888888888876664332 223333445566666667665544
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.74 E-value=6e-18 Score=156.85 Aligned_cols=154 Identities=18% Similarity=0.203 Sum_probs=110.3
Q ss_pred cCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccc
Q 048796 74 SQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLV 153 (555)
Q Consensus 74 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~ 153 (555)
..+++|++|++++|.++ .++ .+..+++|++|++++|.++ .+..+..+++|+.|++++|.+++..+..+..+
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l----- 111 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGL----- 111 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTC-----
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCC-----
Confidence 56677888888888887 444 5777788888888888665 23467778888888888888876666666555
Q ss_pred cCCCCCcCEEEccCCcCCCcCCccccCccccceeeccccc-ccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCE
Q 048796 154 LPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNH-LSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNE 232 (555)
Q Consensus 154 l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~ 232 (555)
++|++|+|++|.+++..+..+..+++|+.|+|++|. ++ .++ .+..+++|+.|++++|.+++..+-.-.++|+.
T Consensus 112 ----~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~ 185 (197)
T 4ezg_A 112 ----TSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQ 185 (197)
T ss_dssp ----TTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCE
T ss_pred ----CCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCE
Confidence 778888888888887677778888888888888887 55 344 57778888888888888875432211267888
Q ss_pred EEeccCCCCC
Q 048796 233 FNVSYNDLSG 242 (555)
Q Consensus 233 L~ls~N~l~~ 242 (555)
|++++|++.+
T Consensus 186 L~l~~N~i~~ 195 (197)
T 4ezg_A 186 LYAFSQTIGG 195 (197)
T ss_dssp EEECBC----
T ss_pred EEeeCcccCC
Confidence 8888887753
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-18 Score=169.51 Aligned_cols=166 Identities=23% Similarity=0.311 Sum_probs=114.6
Q ss_pred CccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEcc
Q 048796 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLS 133 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls 133 (555)
++..+++++|.+++.. .+..+++|++|++++|.|+. ++ .+..+++|+.|+|++|++++..+ +..+++|+.|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECC
Confidence 4666777777776433 46677778888888887774 33 56777778888888887774333 7777778888888
Q ss_pred CCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeC
Q 048796 134 GNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDL 213 (555)
Q Consensus 134 ~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 213 (555)
+|.+++..+ +.. ++|+.|+|++|.+++. ..+..+++|+.|+|++|+|++. + .+..+++|+.|++
T Consensus 94 ~N~l~~l~~-----------~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L 157 (263)
T 1xeu_A 94 RNRLKNLNG-----------IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDL 157 (263)
T ss_dssp SSCCSCCTT-----------CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEEC
T ss_pred CCccCCcCc-----------ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEEC
Confidence 887764221 111 5677788888877754 3577777788888888877754 3 5677777888888
Q ss_pred CCCcCCCCCChhhh--cCCCEEEeccCCCCCC
Q 048796 214 SGNQFKGEIPDKLS--LKLNEFNVSYNDLSGP 243 (555)
Q Consensus 214 s~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~ 243 (555)
++|++++. ..+. ++|+.|++++|++++.
T Consensus 158 ~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 158 HGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 88877765 2222 6777788888877654
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.8e-19 Score=194.10 Aligned_cols=213 Identities=19% Similarity=0.220 Sum_probs=112.2
Q ss_pred CCCCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCC---------CCcccccCCCCccEEEccCCcCCCCCCccccCCCC
Q 048796 8 TTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISG---------DISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDR 78 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~---------~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~ 78 (555)
+.++.|+|.+|.+... +.. .|+.++|+.|.|.+ ..+..+..+.+|+.|+|++|.+. .+|..+..+++
T Consensus 173 ~~~~~l~L~~n~~~~~-~~~--~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~ 248 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQA--LLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDF 248 (727)
T ss_dssp ----------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCS
T ss_pred CccceEEeeCCCCCcc-hhh--HhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCC
Confidence 4577888888888753 221 23334444444332 33566777778888888888887 66666678888
Q ss_pred ccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCC
Q 048796 79 LSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYP 158 (555)
Q Consensus 79 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~ 158 (555)
|++|+|++|.|+ .+|..|..+++|+.|+|++|+|+ .+|..|+.+.+|+.|+|++|.|+ .+|..++.+ +
T Consensus 249 L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l---------~ 316 (727)
T 4b8c_D 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNL---------C 316 (727)
T ss_dssp CSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSC---------T
T ss_pred CCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcC---------C
Confidence 888888888888 77788888888888888888888 67888888888888888888886 566666666 7
Q ss_pred CcCEEEccCCcCCCcCCccccCccc-cceeecccccccCCCchhccCCCCCCEEeCCCC--------cCCCCCChhhh--
Q 048796 159 PMESLDLSGNALTGVLPSDIGNMGR-LRLLNLANNHLSGKMPSELSKLGALEYLDLSGN--------QFKGEIPDKLS-- 227 (555)
Q Consensus 159 ~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N--------~l~~~~p~~~~-- 227 (555)
+|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|. .|+.|++++| .|.+..+..+.
T Consensus 317 ~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l 390 (727)
T 4b8c_D 317 NLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTDGEPQREYDSLQQSTEHLATDL 390 (727)
T ss_dssp TCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C------------------------------
T ss_pred CccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecccccccccCCccccccchhhcc
Confidence 8888888888888887777765432 23478888888877765 3555666666 22222222222
Q ss_pred cCCCEEEeccCCCCC
Q 048796 228 LKLNEFNVSYNDLSG 242 (555)
Q Consensus 228 ~~L~~L~ls~N~l~~ 242 (555)
..+....+++|-+.+
T Consensus 391 ~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 391 AKRTFTVLSYNTLCQ 405 (727)
T ss_dssp -----------CCCG
T ss_pred cccceeeeecccccc
Confidence 334556677777654
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.3e-18 Score=189.47 Aligned_cols=187 Identities=17% Similarity=0.184 Sum_probs=73.4
Q ss_pred CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCC---------CCCccccCCCCccEEEeeCCcCCCCCchhccC
Q 048796 29 KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSG---------SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEI 99 (555)
Q Consensus 29 ~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~---------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 99 (555)
+.++.|+|.+|.+....... |+.++|+.|.|.+ ..+..+..+..|+.|+|++|.|. .+|..+..
T Consensus 173 ~~~~~l~L~~n~~~~~~~~~------l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~ 245 (727)
T 4b8c_D 173 PLTPKIELFANGKDEANQAL------LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFK 245 (727)
T ss_dssp -------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGG
T ss_pred CccceEEeeCCCCCcchhhH------hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcC
Confidence 34677888888776543222 3444444444331 33445555555666666666555 34444445
Q ss_pred CCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCcccc
Q 048796 100 SPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIG 179 (555)
Q Consensus 100 l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~ 179 (555)
+++|++|+|++|.|+ .+|..|..+++|+.|+|++|.|+ .+|..++.+ ++|++|+|++|.|+ .+|..|.
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l---------~~L~~L~L~~N~l~-~lp~~~~ 313 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSC---------FQLKYFYFFDNMVT-TLPWEFG 313 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGG---------TTCSEEECCSSCCC-CCCSSTT
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCC---------CCCCEEECCCCCCC-ccChhhh
Confidence 555666666666555 45555555555555555555555 445544444 55555555555555 3444455
Q ss_pred CccccceeecccccccCCCchhccCCCC-CCEEeCCCCcCCCCCChhhhcCCCEEEeccC
Q 048796 180 NMGRLRLLNLANNHLSGKMPSELSKLGA-LEYLDLSGNQFKGEIPDKLSLKLNEFNVSYN 238 (555)
Q Consensus 180 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N 238 (555)
.+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|. .|..|+++.|
T Consensus 314 ~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~----~l~~l~l~~n 369 (727)
T 4b8c_D 314 NLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH----ERRFIEINTD 369 (727)
T ss_dssp SCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC----C---------
T ss_pred cCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc----ccceeEeecc
Confidence 5555555555555555555554433211 12345555555555553 2334444444
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.4e-20 Score=200.59 Aligned_cols=193 Identities=19% Similarity=0.136 Sum_probs=119.0
Q ss_pred CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCc-------------CCCCCCccccCCCCccEEE-eeCCcCCCCC
Q 048796 28 LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK-------------LSGSLPNLTSQFDRLSTFN-IRNNSVTGTL 93 (555)
Q Consensus 28 l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~-------------l~~~~~~~~~~l~~L~~L~-L~~N~l~~~~ 93 (555)
.++|+.|+|++|+|+.+ |..+..+++|+.|++++|. +.+.+|..+..+++|+.|+ ++.|.+....
T Consensus 348 ~~~L~~L~Ls~n~L~~L-p~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~ 426 (567)
T 1dce_A 348 DEQLFRCELSVEKSTVL-QSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLR 426 (567)
T ss_dssp TTTSSSCCCCHHHHHHH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred CccceeccCChhhHHhh-HHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhh
Confidence 34555666666666533 3333444456666665553 3445555666666666666 4444332110
Q ss_pred ch-----hccC--CCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEcc
Q 048796 94 PS-----LLEI--SPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLS 166 (555)
Q Consensus 94 ~~-----~l~~--l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls 166 (555)
.- .+.. ...|+.|+|++|+|++ +|. +..+++|+.|+|++|.|+ .+|..++.+ ++|+.|+|+
T Consensus 427 ~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l---------~~L~~L~Ls 494 (567)
T 1dce_A 427 SKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAAL---------RCLEVLQAS 494 (567)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGC---------TTCCEEECC
T ss_pred hhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcC---------CCCCEEECC
Confidence 00 0000 1247777777777774 555 777777777777777777 566666555 777777777
Q ss_pred CCcCCCcCCccccCccccceeecccccccCCC-chhccCCCCCCEEeCCCCcCCCCCChhh-----hcCCCEEEe
Q 048796 167 GNALTGVLPSDIGNMGRLRLLNLANNHLSGKM-PSELSKLGALEYLDLSGNQFKGEIPDKL-----SLKLNEFNV 235 (555)
Q Consensus 167 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-----~~~L~~L~l 235 (555)
+|.|++ +| .|..+++|+.|+|++|.|++.. |..+..+++|+.|+|++|.|++..|... .++|+.||+
T Consensus 495 ~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 495 DNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 777775 45 6777777888888888777665 7777777778888888887776555321 156776653
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-16 Score=147.60 Aligned_cols=127 Identities=24% Similarity=0.319 Sum_probs=68.5
Q ss_pred CEEECCCCcCCCCCCCCC-CCCCEEEcCCCcCCCCCcc-cccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCc
Q 048796 11 SVLNLSSNSLSGTLPTSL-KSCVILDLSRNMISGDISD-MQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS 88 (555)
Q Consensus 11 ~~L~Ls~N~l~~~~~~~l-~~L~~L~L~~N~l~~~~~~-~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 88 (555)
++|++++|+|+ .+|..+ .+|++|+|++|+|+++.+. .+..+++|++|+|++|.|++..|..|.++++|++|+|++|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 89 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred CEEEcCCCCcC-cCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCc
Confidence 55666666664 344332 3555666666655554432 34555555555555555555555555555555555555555
Q ss_pred CCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCccc
Q 048796 89 VTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 89 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
|++..+..|..+++|++|+|++|+|++..|..+..+++|+.|+|++|.+.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 90 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred CCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 55555555555555555555555555444555555555555555555444
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.67 E-value=2.7e-16 Score=141.71 Aligned_cols=132 Identities=26% Similarity=0.250 Sum_probs=78.6
Q ss_pred CCccEEEccCCcCC-CCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEE
Q 048796 53 ANLEILDLSSNKLS-GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLN 131 (555)
Q Consensus 53 ~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ 131 (555)
++|+.|+|++|.++ +.+|..+..+++|++|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45777777777776 55666667777777777777777654 5566677777777777777655666665666666666
Q ss_pred ccCCcccccCC-cCccccccccccCCCCCcCEEEccCCcCCCcCC---ccccCccccceeeccccccc
Q 048796 132 LSGNGFSGAIP-LRSSHASELLVLPSYPPMESLDLSGNALTGVLP---SDIGNMGRLRLLNLANNHLS 195 (555)
Q Consensus 132 Ls~N~l~~~~p-~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~ 195 (555)
|++|.+++... ..+.. +++|++|++++|.+++..+ ..+..+++|+.|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~---------l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKK---------LECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSS---------CSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhc---------CCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 66666653211 22222 2455555555555554333 24445555555555555544
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.66 E-value=9.4e-16 Score=139.38 Aligned_cols=130 Identities=18% Similarity=0.188 Sum_probs=81.0
Q ss_pred CCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcC
Q 048796 10 LSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSV 89 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 89 (555)
.+.+++++|+++.......++|++|+|++|++++..+..+..+++|++|+|++|.|++..+..|..+++|++|+|++|+|
T Consensus 9 ~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 88 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKL 88 (177)
T ss_dssp TTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCc
Confidence 46677777777643333345666777777776666655566666666777766666655555566666666666666666
Q ss_pred CCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccc
Q 048796 90 TGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSG 139 (555)
Q Consensus 90 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~ 139 (555)
++..+..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+.+
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 89 QSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 65555556666666666666666664444444556666666666666554
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-16 Score=159.79 Aligned_cols=91 Identities=19% Similarity=0.312 Sum_probs=79.0
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEeC------CCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP 533 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~ 533 (555)
++.+|+.. .+.||+|+||.||+|++. +++.||||+++.......++|.+|+.+|++++|||||+++|+|.+.
T Consensus 38 i~~~d~~l--~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~ 115 (329)
T 4aoj_A 38 IKRRDIVL--KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEG 115 (329)
T ss_dssp CCGGGEEE--EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred cCHHHeEE--EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence 44455544 678999999999999863 4788999999877666678999999999999999999999999987
Q ss_pred CCceEEEEEeccCCCChhhhh
Q 048796 534 REQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 534 ~~~~~~lv~e~~~~GsL~~~l 554 (555)
+. .+||||||++|+|.++|
T Consensus 116 ~~--~~lV~Ey~~~G~L~~~l 134 (329)
T 4aoj_A 116 RP--LLMVFEYMRHGDLNRFL 134 (329)
T ss_dssp SS--EEEEEECCTTCBHHHHH
T ss_pred CE--EEEEEEcCCCCcHHHHH
Confidence 77 99999999999999886
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-16 Score=157.81 Aligned_cols=92 Identities=17% Similarity=0.291 Sum_probs=76.9
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEeC------CCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP 533 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~ 533 (555)
+..+++.. .+.||+|+||.||+|++. ++..||||+++.......++|.+|+.+|++++|||||+++|+|.+.
T Consensus 10 I~r~~~~l--~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~ 87 (299)
T 4asz_A 10 IKRHNIVL--KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG 87 (299)
T ss_dssp CCGGGEEE--EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred cCHHHeEE--eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC
Confidence 34444443 678999999999999863 4778999999877666678899999999999999999999999987
Q ss_pred CCceEEEEEeccCCCChhhhhC
Q 048796 534 REQERLLLADYIQGDSLALHLY 555 (555)
Q Consensus 534 ~~~~~~lv~e~~~~GsL~~~l~ 555 (555)
+. .++|||||++|+|.++|+
T Consensus 88 ~~--~~lV~Ey~~~G~L~~~l~ 107 (299)
T 4asz_A 88 DP--LIMVFEYMKHGDLNKFLR 107 (299)
T ss_dssp SS--EEEEEECCTTCBHHHHHH
T ss_pred CE--EEEEEEcCCCCcHHHHHH
Confidence 77 999999999999999873
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2e-16 Score=142.52 Aligned_cols=133 Identities=23% Similarity=0.254 Sum_probs=91.7
Q ss_pred CCCccEEEeeCCcCC-CCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcccccccccc
Q 048796 76 FDRLSTFNIRNNSVT-GTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVL 154 (555)
Q Consensus 76 l~~L~~L~L~~N~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l 154 (555)
.++|++|+|++|.++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++.+|..+..+
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l------ 94 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKL------ 94 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHC------
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhC------
Confidence 366778888888876 56666677777788888888877744 566677777777777777776555444434
Q ss_pred CCCCCcCEEEccCCcCCCcCC-ccccCccccceeecccccccCCCc---hhccCCCCCCEEeCCCCcCC
Q 048796 155 PSYPPMESLDLSGNALTGVLP-SDIGNMGRLRLLNLANNHLSGKMP---SELSKLGALEYLDLSGNQFK 219 (555)
Q Consensus 155 ~~~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~ 219 (555)
++|++|+|++|.+++... ..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 95 ---~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 95 ---PNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ---TTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ---CCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 677777777777775422 566677777777777777775444 36667777777777777666
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.5e-15 Score=140.03 Aligned_cols=126 Identities=21% Similarity=0.214 Sum_probs=67.8
Q ss_pred CEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcC
Q 048796 11 SVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSV 89 (555)
Q Consensus 11 ~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 89 (555)
+.+++++|+|+ .+|.. .++|++|+|++|+|+.++ ..+..+++|+.|+|++|.|++..+..|.++++|++|+|++|+|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~~~l~~L~L~~n~i~~ip-~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIPRDVTELYLDGNQFTLVP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp TEEECTTSCCS-SCCSCCCTTCCEEECCSSCCCSCC-GGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CEEEcCCCCCC-cCCCCCCCCCCEEECCCCcCchhH-HHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 45666666665 33332 335556666666555333 4444555555555555555555555555555555555555555
Q ss_pred CCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCccc
Q 048796 90 TGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 90 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
++..+..|..+++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 5555555555555555555555555333334445555555555555544
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=9e-19 Score=188.28 Aligned_cols=180 Identities=19% Similarity=0.192 Sum_probs=150.2
Q ss_pred cCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCc-------------CCCCCchhccCCCCccEEE-cCCCcCCC
Q 048796 50 NWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS-------------VTGTLPSLLEISPRLVTLD-VSSNQLKG 115 (555)
Q Consensus 50 ~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~~~~l~~l~~L~~L~-L~~N~l~~ 115 (555)
...++|+.|+|++|.|+ .+|..++.+++|++|++++|. +.+..|..+..+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 45678999999999998 789999999999999997765 5567778888889999998 6666543
Q ss_pred CCch------hhhC--CCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCcccccee
Q 048796 116 PIPD------NFFS--SMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLL 187 (555)
Q Consensus 116 ~~~~------~~~~--~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 187 (555)
.++. .+.. ...|+.|+|++|.|++ +|. +..+ ++|+.|+|++|.|+ .+|..|+.+++|+.|
T Consensus 424 ~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l---------~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 491 (567)
T 1dce_A 424 DLRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQL---------LLVTHLDLSHNRLR-ALPPALAALRCLEVL 491 (567)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGG---------TTCCEEECCSSCCC-CCCGGGGGCTTCCEE
T ss_pred hhhhhhhhcccccccCccCceEEEecCCCCCC-CcC-cccc---------ccCcEeecCccccc-ccchhhhcCCCCCEE
Confidence 1111 1111 2369999999999986 554 6665 89999999999999 778899999999999
Q ss_pred ecccccccCCCchhccCCCCCCEEeCCCCcCCCCC-Chhhh--cCCCEEEeccCCCCCCcC
Q 048796 188 NLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEI-PDKLS--LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 188 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~--~~L~~L~ls~N~l~~~~p 245 (555)
+|++|.|++ +| .++.+++|+.|+|++|+|++.. |..+. ++|+.|++++|++++..|
T Consensus 492 ~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 492 QASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp ECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred ECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 999999996 67 8999999999999999999886 88777 899999999999998765
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.9e-16 Score=144.00 Aligned_cols=110 Identities=26% Similarity=0.306 Sum_probs=68.7
Q ss_pred CccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCc
Q 048796 102 RLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNM 181 (555)
Q Consensus 102 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l 181 (555)
+|+.|+|++|+|+ .+|..|..+++|+.|+|++|.|++..+..|..+ ++|++|+|++|.|++..+..|..+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l---------~~L~~L~Ls~N~l~~i~~~~f~~l 101 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNM---------TQLLTLILSYNRLRCIPPRTFDGL 101 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTC---------TTCCEEECCSSCCCBCCTTTTTTC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCC---------CCCCEEECCCCccCEeCHHHhCCC
Confidence 4555555555554 444555555555555555555554444444444 566666666666666666667777
Q ss_pred cccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCC
Q 048796 182 GRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGE 221 (555)
Q Consensus 182 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 221 (555)
++|+.|+|++|.|+...+..|..+++|+.|+|++|.+...
T Consensus 102 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 102 KSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp TTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 7777777777777765555677777777777777777643
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.5e-16 Score=157.07 Aligned_cols=199 Identities=18% Similarity=0.145 Sum_probs=119.4
Q ss_pred CCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcC----CCCCchhhhCCCCC
Q 048796 52 EANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQL----KGPIPDNFFSSMAL 127 (555)
Q Consensus 52 ~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l----~~~~~~~~~~~~~L 127 (555)
+.+|+.|+|.+ .++.+.+.+|.++++|++|+|++|.+..+.+.+|..+.++..+.+..+.. .......|..+..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 66677777766 66655556666677777777777766655556666666666555544211 11122233333333
Q ss_pred C-eEEccCCcc-cc------cCCcCccccc--------ccccc-CCCCCcCEEEccCCcCCCcCCccccCccccceeecc
Q 048796 128 T-NLNLSGNGF-SG------AIPLRSSHAS--------ELLVL-PSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLA 190 (555)
Q Consensus 128 ~-~L~Ls~N~l-~~------~~p~~~~~~~--------~l~~l-~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 190 (555)
+ .+.+....- .. ..+..+..+. ....+ ..+++|+.|+|++|.++.+.+.+|.+|.+|+.|+|.
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 3 222211100 00 0000000000 00000 014788899999888887777788888889999998
Q ss_pred cccccCCCchhccCCCCCC-EEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccCCCC
Q 048796 191 NNHLSGKMPSELSKLGALE-YLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNFPK 253 (555)
Q Consensus 191 ~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~~~ 253 (555)
+| ++.....+|.++++|+ .|++.+ .++...+..|. .+|+.+++++|.+....+..|.++++
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~ 322 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVP 322 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCC
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcc
Confidence 87 7767777888888898 888888 67755556665 67888888888888666666655543
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=99.64 E-value=2.3e-16 Score=156.03 Aligned_cols=91 Identities=22% Similarity=0.307 Sum_probs=75.0
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEe------CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEc
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWG 532 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~ 532 (555)
+..+++.. .+.||+|+||.||+|++ .+++.||||+++.... ...++|.+|+.+|++++|||||+++|+|.+
T Consensus 23 i~~~~~~~--~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~ 100 (308)
T 4gt4_A 23 ISLSAVRF--MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK 100 (308)
T ss_dssp CCGGGEEE--EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CCHHHCeE--eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE
Confidence 34444444 56899999999999997 2467899999965433 346889999999999999999999999998
Q ss_pred CCCceEEEEEeccCCCChhhhh
Q 048796 533 PREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 533 ~~~~~~~lv~e~~~~GsL~~~l 554 (555)
.+. .++|||||++|+|.++|
T Consensus 101 ~~~--~~lV~Ey~~~G~L~~~L 120 (308)
T 4gt4_A 101 DQP--LSMIFSYCSHGDLHEFL 120 (308)
T ss_dssp SSS--CEEEEECCSSCBHHHHH
T ss_pred CCE--EEEEEEcCCCCcHHHHH
Confidence 777 99999999999999987
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.64 E-value=4.7e-16 Score=137.06 Aligned_cols=85 Identities=28% Similarity=0.373 Sum_probs=56.4
Q ss_pred CCccEEEccCCcCC-CCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEE
Q 048796 53 ANLEILDLSSNKLS-GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLN 131 (555)
Q Consensus 53 ~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ 131 (555)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|+.|+|++|++++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 35677777777766 56666666777777777777777654 5566677777777777777655666555566666666
Q ss_pred ccCCcccc
Q 048796 132 LSGNGFSG 139 (555)
Q Consensus 132 Ls~N~l~~ 139 (555)
+++|.+++
T Consensus 95 ls~N~i~~ 102 (149)
T 2je0_A 95 LSGNKIKD 102 (149)
T ss_dssp CTTSCCCS
T ss_pred CCCCcCCC
Confidence 66666553
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.63 E-value=3.8e-16 Score=137.66 Aligned_cols=128 Identities=23% Similarity=0.295 Sum_probs=91.7
Q ss_pred CCCccEEEeeCCcCC-CCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcccccccccc
Q 048796 76 FDRLSTFNIRNNSVT-GTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVL 154 (555)
Q Consensus 76 l~~L~~L~L~~N~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l 154 (555)
.++|++|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|+.|+|++|.+++.+|..+..+
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l------ 87 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKC------ 87 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHC------
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhC------
Confidence 367888888888887 66777777888888888888888754 667777778888888887776555544444
Q ss_pred CCCCCcCEEEccCCcCCCc-CCccccCccccceeecccccccCCCc---hhccCCCCCCEEeCC
Q 048796 155 PSYPPMESLDLSGNALTGV-LPSDIGNMGRLRLLNLANNHLSGKMP---SELSKLGALEYLDLS 214 (555)
Q Consensus 155 ~~~~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls 214 (555)
++|++|++++|.+++. .+..+..+++|+.|++++|.+++..+ ..+..+++|+.||++
T Consensus 88 ---~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 88 ---PNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ---TTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ---CCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 6777777777777753 23567777777777777777776544 456677777777765
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.62 E-value=5.5e-15 Score=134.27 Aligned_cols=129 Identities=15% Similarity=0.166 Sum_probs=72.6
Q ss_pred CEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCC
Q 048796 32 VILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSN 111 (555)
Q Consensus 32 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 111 (555)
+.+++++|+++.++.... ++|+.|+|++|.+++..+..|..+++|++|+|++|.|++..+..+..+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~~~p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSSCCTTCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCccCCCCCC---CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 456666666665543332 35666666666666555555666666666666666666555555566666666666666
Q ss_pred cCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCC
Q 048796 112 QLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTG 172 (555)
Q Consensus 112 ~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~ 172 (555)
++++..+..+..+++|+.|+|++|.+++..+..+..+ ++|++|+|++|.+++
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l---------~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRL---------TSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC---------TTCCEEECCSSCBCC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCC---------cccCEEEecCCCeec
Confidence 6664444445555555555555555553333222222 444555555554443
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.59 E-value=4.9e-17 Score=176.65 Aligned_cols=209 Identities=17% Similarity=0.099 Sum_probs=112.6
Q ss_pred CCCCEEEcCCCcCCCCCc-ccccCCCCccEEEccCCcCC-CCCCccccCCCCccEEEeeC-----------CcCCCC-Cc
Q 048796 29 KSCVILDLSRNMISGDIS-DMQNWEANLEILDLSSNKLS-GSLPNLTSQFDRLSTFNIRN-----------NSVTGT-LP 94 (555)
Q Consensus 29 ~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~-----------N~l~~~-~~ 94 (555)
++|++|+|++|.+++... ..+..+++|++|+|+ +.+. +.++..+..+++|++|+|++ |.+++. +.
T Consensus 293 ~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~ 371 (592)
T 3ogk_B 293 AQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLI 371 (592)
T ss_dssp GGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHH
T ss_pred CCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHH
Confidence 455556665555443221 223445556666655 3222 12222334455666666662 344422 11
Q ss_pred hhccCCCCccEEEcCCCcCCCCCchhhhC-CCCCCeEEcc----CCcccccCCc-CccccccccccCCCCCcCEEEccCC
Q 048796 95 SLLEISPRLVTLDVSSNQLKGPIPDNFFS-SMALTNLNLS----GNGFSGAIPL-RSSHASELLVLPSYPPMESLDLSGN 168 (555)
Q Consensus 95 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~-~~~L~~L~Ls----~N~l~~~~p~-~~~~~~~l~~l~~~~~L~~L~Ls~N 168 (555)
.....+++|++|+++.|++++..+..+.. +++|+.|+++ .|.+++...+ .+.. .+..+++|++|+|++|
T Consensus 372 ~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~-----~~~~~~~L~~L~L~~~ 446 (592)
T 3ogk_B 372 ALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRS-----LLIGCKKLRRFAFYLR 446 (592)
T ss_dssp HHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHH-----HHHHCTTCCEEEEECC
T ss_pred HHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHH-----HHHhCCCCCEEEEecC
Confidence 22334566666666666665544444444 6666666664 4444432100 0000 0122477778887643
Q ss_pred c--CCCcCCcccc-CccccceeecccccccC-CCchhccCCCCCCEEeCCCCcCCCCCChhhh---cCCCEEEeccCCCC
Q 048796 169 A--LTGVLPSDIG-NMGRLRLLNLANNHLSG-KMPSELSKLGALEYLDLSGNQFKGEIPDKLS---LKLNEFNVSYNDLS 241 (555)
Q Consensus 169 ~--l~~~~p~~~~-~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~~L~~L~ls~N~l~ 241 (555)
. +++..+..+. .+++|+.|+|++|.+++ .++..+.++++|+.|+|++|.|++.....+. ++|+.|++++|+++
T Consensus 447 ~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 447 QGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp GGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred CCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 3 5554444443 36778888888888775 3344556778888888888887644333322 67888888888876
Q ss_pred CC
Q 048796 242 GP 243 (555)
Q Consensus 242 ~~ 243 (555)
..
T Consensus 527 ~~ 528 (592)
T 3ogk_B 527 MT 528 (592)
T ss_dssp TT
T ss_pred HH
Confidence 54
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.56 E-value=2.1e-16 Score=171.65 Aligned_cols=131 Identities=14% Similarity=0.064 Sum_probs=60.6
Q ss_pred CCCCCCEEECCCCcCCCC-------CCCCCCCCCEEEcCCCcCCCCC----cccccCCCCccEEEccCCcCCCCCCcccc
Q 048796 6 NSTTLSVLNLSSNSLSGT-------LPTSLKSCVILDLSRNMISGDI----SDMQNWEANLEILDLSSNKLSGSLPNLTS 74 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~-------~~~~l~~L~~L~L~~N~l~~~~----~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~ 74 (555)
+|++|++|+|++|.+++. .+..+++|++|+|++|.+++.. +..+..+++|+.|+|++|.+.+ ++..+.
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~ 240 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFK 240 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHh
Confidence 345556666665555433 1223455556666555554221 2233344556666666655553 334445
Q ss_pred CCCCccEEEeeCCcCC---CCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCccc
Q 048796 75 QFDRLSTFNIRNNSVT---GTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 75 ~l~~L~~L~L~~N~l~---~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
.+++|++|+++.+... ......+..+++|+.|+++++.. ..+|..+..+++|+.|+|++|.++
T Consensus 241 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~ 306 (592)
T 3ogk_B 241 AAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLE 306 (592)
T ss_dssp HCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCC
T ss_pred hhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCC
Confidence 5555555555432211 11222333444444444444322 234444444555555555555543
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=4.7e-15 Score=148.42 Aligned_cols=83 Identities=23% Similarity=0.417 Sum_probs=68.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||.++.. .....+.|.+|+.+|++++|||||++++++.+.+. .|+|||||+
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~--~yiVmEy~~ 106 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGS--LYIVMDYCE 106 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECCT
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCE--EEEEEeCCC
Confidence 67899999999999997 67999999999653 23346789999999999999999999999998777 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.++|
T Consensus 107 gg~L~~~i 114 (350)
T 4b9d_A 107 GGDLFKRI 114 (350)
T ss_dssp TCBHHHHH
T ss_pred CCcHHHHH
Confidence 99999886
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=4.2e-15 Score=148.53 Aligned_cols=83 Identities=22% Similarity=0.344 Sum_probs=74.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|+.||||+++.......+.+.+|+.+|+.++|||||++++++.+.+. +|||||||++|
T Consensus 79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~--~~ivmEy~~gg 156 (346)
T 4fih_A 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGG 156 (346)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEECCCTTE
T ss_pred eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE--EEEEEeCCCCC
Confidence 46799999999999997 6799999999976555556778999999999999999999999998777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 157 ~L~~~l 162 (346)
T 4fih_A 157 ALTDIV 162 (346)
T ss_dssp EHHHHH
T ss_pred cHHHHH
Confidence 999876
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.54 E-value=1.3e-14 Score=131.68 Aligned_cols=129 Identities=22% Similarity=0.195 Sum_probs=72.4
Q ss_pred CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEc
Q 048796 29 KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDV 108 (555)
Q Consensus 29 ~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L 108 (555)
.+|++|+|++|+|+.+ +......++|+.|+|++|.|++. ..+..+++|++|+|++|.|++..+..+..+++|+.|+|
T Consensus 19 ~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 95 (176)
T 1a9n_A 19 VRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 95 (176)
T ss_dssp TSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEEC
Confidence 3455555555555533 33333333566666666666543 45566666666666666666444444566666666666
Q ss_pred CCCcCCCCCch--hhhCCCCCCeEEccCCcccccCCcC----ccccccccccCCCCCcCEEEccCCcCC
Q 048796 109 SSNQLKGPIPD--NFFSSMALTNLNLSGNGFSGAIPLR----SSHASELLVLPSYPPMESLDLSGNALT 171 (555)
Q Consensus 109 ~~N~l~~~~~~--~~~~~~~L~~L~Ls~N~l~~~~p~~----~~~~~~l~~l~~~~~L~~L~Ls~N~l~ 171 (555)
++|+|+ .+|. .+..+++|+.|++++|.+.. +|.. +..+ ++|+.|++++|.+.
T Consensus 96 ~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l---------~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 96 TNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKV---------PQVRVLDFQKVKLK 153 (176)
T ss_dssp CSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHC---------TTCSEETTEECCHH
T ss_pred CCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHC---------CccceeCCCcCCHH
Confidence 666664 3444 55666666666666666652 2321 2222 66666666666654
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.8e-14 Score=144.60 Aligned_cols=235 Identities=13% Similarity=0.080 Sum_probs=144.0
Q ss_pred CCCCEEECCCCcCCC----CCCCCCCCCCEEEcCCCcCC--CCCcccccCCCCccEEEccCCcCCCCCCccccC------
Q 048796 8 TTLSVLNLSSNSLSG----TLPTSLKSCVILDLSRNMIS--GDISDMQNWEANLEILDLSSNKLSGSLPNLTSQ------ 75 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~----~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~------ 75 (555)
.+|+.|.++++ +.. .+...+++|+.|||++|+|. ......+ +.+..+.+..|.| ...+|.+
T Consensus 25 ~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~~ 97 (329)
T 3sb4_A 25 NSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGVT 97 (329)
T ss_dssp HHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTEE
T ss_pred CceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhcccccccc
Confidence 35666666654 111 11122566777777777776 2222222 1244555555533 3456667
Q ss_pred --CCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcc----cccCCcCccccc
Q 048796 76 --FDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGF----SGAIPLRSSHAS 149 (555)
Q Consensus 76 --l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l----~~~~p~~~~~~~ 149 (555)
+++|++|+|.+ .++.+...+|.++++|+.|++.+|.+....+..|..+.++..+.+..+.. .......|..+.
T Consensus 98 ~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~ 176 (329)
T 3sb4_A 98 KGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGE 176 (329)
T ss_dssp EECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESC
T ss_pred cccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccc
Confidence 88899999988 88767777888889999999988888766667777777776666655322 111122222221
Q ss_pred ccc---cc--------------CCCCCcCEEEccCCcCCCcCCccc-cCccccceeecccccccCCCchhccCCCCCCEE
Q 048796 150 ELL---VL--------------PSYPPMESLDLSGNALTGVLPSDI-GNMGRLRLLNLANNHLSGKMPSELSKLGALEYL 211 (555)
Q Consensus 150 ~l~---~l--------------~~~~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 211 (555)
.+. .+ -...+++.+.+.++-.. .....+ ..+++|+.|+|++|+++.....+|.++.+|+.|
T Consensus 177 ~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l 255 (329)
T 3sb4_A 177 PLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKI 255 (329)
T ss_dssp CCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEE
T ss_pred ccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEE
Confidence 111 00 01123344444433211 111111 137899999999999998888899999999999
Q ss_pred eCCCCcCCCCCChhhh--cCCC-EEEeccCCCCCCcCccccCCCC
Q 048796 212 DLSGNQFKGEIPDKLS--LKLN-EFNVSYNDLSGPIPENLRNFPK 253 (555)
Q Consensus 212 ~Ls~N~l~~~~p~~~~--~~L~-~L~ls~N~l~~~~p~~l~~~~~ 253 (555)
++.+| ++...+..|. .+|+ .+++.+ .++...+..|.++..
T Consensus 256 ~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~ 298 (329)
T 3sb4_A 256 KLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDN 298 (329)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTT
T ss_pred ECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCcc
Confidence 99998 7755555565 6799 999988 676555566666554
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.53 E-value=1.5e-14 Score=131.25 Aligned_cols=132 Identities=20% Similarity=0.187 Sum_probs=91.8
Q ss_pred cCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCe
Q 048796 50 NWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTN 129 (555)
Q Consensus 50 ~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~ 129 (555)
....+|+.|+|++|.++. ++......++|++|+|++|.|++. ..+..+++|+.|+|++|+|++..+..+..+++|+.
T Consensus 16 ~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp ECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred CCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 345568888888888873 454333344788888888888754 56777888888888888887544444577888888
Q ss_pred EEccCCcccccCCc--CccccccccccCCCCCcCEEEccCCcCCCcCCc----cccCccccceeeccccccc
Q 048796 130 LNLSGNGFSGAIPL--RSSHASELLVLPSYPPMESLDLSGNALTGVLPS----DIGNMGRLRLLNLANNHLS 195 (555)
Q Consensus 130 L~Ls~N~l~~~~p~--~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~ 195 (555)
|+|++|.+.. +|. .+.. +++|+.|++++|.++.. |. .+..+++|+.||++.|.+.
T Consensus 93 L~L~~N~i~~-~~~~~~l~~---------l~~L~~L~l~~N~i~~~-~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 93 LILTNNSLVE-LGDLDPLAS---------LKSLTYLCILRNPVTNK-KHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EECCSCCCCC-GGGGGGGGG---------CTTCCEEECCSSGGGGS-TTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EECCCCcCCc-chhhHhhhc---------CCCCCEEEecCCCCCCc-HhHHHHHHHHCCccceeCCCcCCHH
Confidence 8888888753 332 3333 37788888888888743 44 3777788888888888765
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=8.8e-15 Score=144.24 Aligned_cols=88 Identities=28% Similarity=0.386 Sum_probs=72.2
Q ss_pred CHHHHhcccCCeeecCCceEEEEEEeCCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceE
Q 048796 461 TAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQER 538 (555)
Q Consensus 461 ~~~~l~~~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~ 538 (555)
..+|+.. .+.||+|+||+||+|++. ..||||.++.. .....+.|.+|+.+|++++|||||+++|+|.. +. .
T Consensus 34 ~~~~l~l--~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~--~ 106 (307)
T 3omv_A 34 EASEVML--STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DN--L 106 (307)
T ss_dssp CTTSCCE--EEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SS--C
T ss_pred cHHHeEE--eeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-Ce--E
Confidence 3344443 678999999999999984 35999998643 33446789999999999999999999998864 44 8
Q ss_pred EEEEeccCCCChhhhhC
Q 048796 539 LLLADYIQGDSLALHLY 555 (555)
Q Consensus 539 ~lv~e~~~~GsL~~~l~ 555 (555)
+||||||++|+|.++|+
T Consensus 107 ~iVmEy~~gGsL~~~l~ 123 (307)
T 3omv_A 107 AIVTQWCEGSSLYKHLH 123 (307)
T ss_dssp EEEEECCSSCBHHHHHH
T ss_pred EEEEEcCCCCCHHHHHh
Confidence 99999999999999873
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=8.9e-15 Score=149.90 Aligned_cols=83 Identities=22% Similarity=0.344 Sum_probs=75.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|+.||||++........+.+.+|+.+|+.++|||||++++++.+.+. +|||||||++|
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~--~~iVmEy~~gG 233 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGG 233 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECCTTE
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCE--EEEEEeCCCCC
Confidence 56899999999999997 6799999999976555556779999999999999999999999998777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 234 ~L~~~i 239 (423)
T 4fie_A 234 ALTDIV 239 (423)
T ss_dssp EHHHHH
T ss_pred cHHHHH
Confidence 999876
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.50 E-value=6.3e-13 Score=136.62 Aligned_cols=100 Identities=10% Similarity=0.045 Sum_probs=47.7
Q ss_pred CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcC
Q 048796 30 SCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVS 109 (555)
Q Consensus 30 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 109 (555)
+|+.+.|..+ ++.+...+|... +|+.+.|.. .++.+...+|.++.+|+.++|.+|+++......|. +.+|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 3445555443 444444444443 355555553 34434444555555555555555555533333444 3455555554
Q ss_pred CCcCCCCCchhhhCCCCCCeEEccC
Q 048796 110 SNQLKGPIPDNFFSSMALTNLNLSG 134 (555)
Q Consensus 110 ~N~l~~~~~~~~~~~~~L~~L~Ls~ 134 (555)
++ +......+|..+.+|+.+.+..
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCT
T ss_pred Cc-hheehhhHhhCCCCCCEEecCC
Confidence 32 4333344445555555555544
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.50 E-value=9.7e-17 Score=148.81 Aligned_cols=82 Identities=18% Similarity=0.199 Sum_probs=35.8
Q ss_pred CccEEEccCCcCCCCCCc------cccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCC
Q 048796 54 NLEILDLSSNKLSGSLPN------LTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMAL 127 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L 127 (555)
.++.++++.|.+++..|. .+..+++|++|+|++|.+++ +| .+..+++|+.|+|++|+++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 344444444444433333 44444444444444444443 22 3444444444444444444 333333333444
Q ss_pred CeEEccCCccc
Q 048796 128 TNLNLSGNGFS 138 (555)
Q Consensus 128 ~~L~Ls~N~l~ 138 (555)
+.|+|++|.++
T Consensus 96 ~~L~L~~N~l~ 106 (198)
T 1ds9_A 96 EELWISYNQIA 106 (198)
T ss_dssp SEEEEEEEECC
T ss_pred CEEECcCCcCC
Confidence 44444444443
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.50 E-value=1.6e-13 Score=123.64 Aligned_cols=85 Identities=22% Similarity=0.324 Sum_probs=42.5
Q ss_pred CccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEcc
Q 048796 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLS 133 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls 133 (555)
+|++|+|++|.|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 31 ~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 110 (170)
T 3g39_A 31 TTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLL 110 (170)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeC
Confidence 34555555555554444445555555555555555554444444555555555555555554333344455555555555
Q ss_pred CCccc
Q 048796 134 GNGFS 138 (555)
Q Consensus 134 ~N~l~ 138 (555)
+|.+.
T Consensus 111 ~N~~~ 115 (170)
T 3g39_A 111 NNPWD 115 (170)
T ss_dssp SSCBC
T ss_pred CCCCC
Confidence 55544
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.49 E-value=6e-14 Score=137.21 Aligned_cols=85 Identities=20% Similarity=0.284 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC--CCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP--REQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~--~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+. .++..||||.+... .....+.|.+|+.+|++++|||||+++++|.+. .....|+||||
T Consensus 31 ~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy 110 (290)
T 3fpq_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred eeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence 45799999999999997 57899999999643 233467899999999999999999999998642 22237999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
|++|+|.++|
T Consensus 111 ~~gg~L~~~l 120 (290)
T 3fpq_A 111 MTSGTLKTYL 120 (290)
T ss_dssp CCSCBHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999999886
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=99.49 E-value=2.2e-14 Score=141.22 Aligned_cols=83 Identities=17% Similarity=0.195 Sum_probs=73.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||+||+|+. .+|+.||||.+.... ....+.+.+|+.+|++++|||||++++++.+.+. .|+|||||
T Consensus 37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~--~yivmEy~ 114 (311)
T 4aw0_A 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK--LYFGLSYA 114 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE--EEEEEecC
Confidence 77999999999999997 689999999996432 2235779999999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.++|
T Consensus 115 ~gG~L~~~i 123 (311)
T 4aw0_A 115 KNGELLKYI 123 (311)
T ss_dssp TTEEHHHHH
T ss_pred CCCCHHHHH
Confidence 999999886
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=2.5e-14 Score=141.53 Aligned_cols=84 Identities=21% Similarity=0.224 Sum_probs=67.2
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC--ceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE--QERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~--~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|++ +|+.||||+++.... ....+..|+..+.+++|||||+++|+|...+. ..+|||||||++
T Consensus 8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 67899999999999998 689999999965432 12233456666778999999999999976432 237999999999
Q ss_pred CChhhhhC
Q 048796 548 DSLALHLY 555 (555)
Q Consensus 548 GsL~~~l~ 555 (555)
|+|.++|+
T Consensus 86 gsL~~~l~ 93 (303)
T 3hmm_A 86 GSLFDYLN 93 (303)
T ss_dssp CBHHHHHH
T ss_pred CcHHHHHH
Confidence 99999873
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.48 E-value=2.6e-13 Score=122.24 Aligned_cols=106 Identities=18% Similarity=0.213 Sum_probs=75.4
Q ss_pred CCCEEECCCCcCCCCCCC-CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 9 TLSVLNLSSNSLSGTLPT-SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
..+.|++++|.|+. +|. ..++|++|+|++|+|+++.+..+..+++|++|+|++|.|++..+..|..+++|++|+|++|
T Consensus 10 ~~~~l~~s~n~l~~-ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 10 SGTTVDCSGKSLAS-VPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp ETTEEECTTSCCSS-CCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCc-cCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 35677777777774 443 3456777777777777776777777777777777777777666666777777777777777
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCC
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKG 115 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 115 (555)
+|++..+..|..+++|+.|+|++|.+..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 7776666667777777777777777764
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.46 E-value=4.4e-16 Score=144.38 Aligned_cols=132 Identities=21% Similarity=0.228 Sum_probs=84.1
Q ss_pred CCCEEEcCCCcCCCCCcc------cccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCc
Q 048796 30 SCVILDLSRNMISGDISD------MQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRL 103 (555)
Q Consensus 30 ~L~~L~L~~N~l~~~~~~------~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L 103 (555)
.++.++++.+.+.+..+. .+..+++|++|+|++|.+++ +| .+..+++|++|+|++|.|+ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 344444444444443332 55666778888888888875 55 6777888888888888887 556666667788
Q ss_pred cEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcC
Q 048796 104 VTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVL 174 (555)
Q Consensus 104 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~ 174 (555)
+.|+|++|++++ +| .+..+++|+.|+|++|.+++..+ +..+..+++|++|++++|.+++.+
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~--------~~~l~~l~~L~~L~l~~N~l~~~~ 156 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGE--------IDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHH--------HHHHTTTTTCSEEEECSCHHHHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhH--------HHHHhcCCCCCEEEecCCcccccc
Confidence 888888888874 44 56677777777777777663211 011222355666666666655443
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.46 E-value=4.4e-13 Score=121.25 Aligned_cols=104 Identities=17% Similarity=0.254 Sum_probs=59.9
Q ss_pred CEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCC
Q 048796 32 VILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSN 111 (555)
Q Consensus 32 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 111 (555)
+.+++++|+++.++..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~iP~~~~---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP---TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSSCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCccCCCcC---CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 355555555554443322 34666666666666555555666666666666666666554445556666666666666
Q ss_pred cCCCCCchhhhCCCCCCeEEccCCccc
Q 048796 112 QLKGPIPDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 112 ~l~~~~~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
+|++..+..|..+++|+.|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666444444556666666666666665
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.6e-15 Score=164.66 Aligned_cols=181 Identities=17% Similarity=0.105 Sum_probs=92.4
Q ss_pred CCCCccEEEccCCcCCCC-CCccccCCCCccEEEeeCCcCCCC-CchhccCCCCccEEEcC---------CCcCCCCCch
Q 048796 51 WEANLEILDLSSNKLSGS-LPNLTSQFDRLSTFNIRNNSVTGT-LPSLLEISPRLVTLDVS---------SNQLKGPIPD 119 (555)
Q Consensus 51 ~~~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~-~~~~l~~l~~L~~L~L~---------~N~l~~~~~~ 119 (555)
.+++|++|+|++|.+++. +...+..+++|++|++++| +... ++.....+++|++|++. .+.++.....
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 345677777777776532 2223456677777777766 3321 22223346677777662 2344322222
Q ss_pred hhh-CCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEcc--C----CcCCCcCC-----ccccCcccccee
Q 048796 120 NFF-SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLS--G----NALTGVLP-----SDIGNMGRLRLL 187 (555)
Q Consensus 120 ~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls--~----N~l~~~~p-----~~~~~l~~L~~L 187 (555)
.+. .+++|+.|.+..|.+++.....+.. .+++|+.|+|+ + |.+++... ..+..+++|+.|
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~--------~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L 437 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIAR--------NRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRL 437 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHH--------HCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEE
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHh--------hCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEE
Confidence 222 3666777766666665433222211 12566666666 3 34442111 113445566666
Q ss_pred ecccccccCCCchhccC-CCCCCEEeCCCCcCCCCCChhhh---cCCCEEEeccCCCC
Q 048796 188 NLANNHLSGKMPSELSK-LGALEYLDLSGNQFKGEIPDKLS---LKLNEFNVSYNDLS 241 (555)
Q Consensus 188 ~L~~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~p~~~~---~~L~~L~ls~N~l~ 241 (555)
+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+. ++|+.|++++|+++
T Consensus 438 ~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 438 SLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp ECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred eecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 6655 444433333333 55666666666666543333331 55666666666664
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.45 E-value=5.4e-13 Score=120.64 Aligned_cols=104 Identities=17% Similarity=0.216 Sum_probs=68.7
Q ss_pred CCEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCc
Q 048796 10 LSVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS 88 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 88 (555)
-+.+++++|+++ .+|.. .++|++|+|++|+|+++.+..+..+++|++|+|++|.|++..+..|..+++|++|+|++|+
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CcEEEeCCCCCC-ccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 356677777765 34433 3466777777777776666666666667777777777765555556667777777777777
Q ss_pred CCCCCchhccCCCCccEEEcCCCcCC
Q 048796 89 VTGTLPSLLEISPRLVTLDVSSNQLK 114 (555)
Q Consensus 89 l~~~~~~~l~~l~~L~~L~L~~N~l~ 114 (555)
|++..+..|..+++|+.|+|++|.+.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cceeCHHHhccccCCCEEEeCCCCcc
Confidence 77555555666777777777777665
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.2e-13 Score=134.17 Aligned_cols=85 Identities=18% Similarity=0.278 Sum_probs=69.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----------ce
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----------QE 537 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----------~~ 537 (555)
.+.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|+.+|++++|||||++++++...+. ..
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~ 89 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVY 89 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcE
Confidence 56899999999999997 6799999999965433 345779999999999999999999999864332 12
Q ss_pred EEEEEeccCCCChhhhh
Q 048796 538 RLLLADYIQGDSLALHL 554 (555)
Q Consensus 538 ~~lv~e~~~~GsL~~~l 554 (555)
+|+|||||++|+|.+++
T Consensus 90 l~ivmE~~~gg~L~~~l 106 (299)
T 4g31_A 90 LYIQMQLCRKENLKDWM 106 (299)
T ss_dssp EEEEEECCCSCCHHHHH
T ss_pred EEEEEecCCCCcHHHHH
Confidence 68999999999999876
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.1e-13 Score=137.75 Aligned_cols=78 Identities=22% Similarity=0.311 Sum_probs=69.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|+.||||+++.... +.+|+.+++.++|||||++++++.+.+. +|||||||+||
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~--~~ivmEy~~gg 135 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPW--VNIFMELLEGG 135 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTE--EEEEECCCTTC
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCE--EEEEEeccCCC
Confidence 56799999999999997 6799999999975432 2479999999999999999999998777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.++|
T Consensus 136 ~L~~~l 141 (336)
T 4g3f_A 136 SLGQLI 141 (336)
T ss_dssp BHHHHH
T ss_pred cHHHHH
Confidence 999987
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1e-13 Score=139.63 Aligned_cols=91 Identities=21% Similarity=0.304 Sum_probs=73.1
Q ss_pred CHHHHhcccCCeeecCCceEEEEEEeC------CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCC-CcceeeeEEEEc
Q 048796 461 TAEELSRAPAEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRH-PNIVPLRAYYWG 532 (555)
Q Consensus 461 ~~~~l~~~~~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H-~niv~l~g~~~~ 532 (555)
..+++.. .+.||+|+||.||+|++. .++.||||.+..... ...++|.+|+.+|.+++| ||||+++|+|..
T Consensus 62 ~~~~~~l--~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 62 PRDRLKL--GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp CGGGEEE--EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred cHHHeEE--eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 3344444 678999999999999862 246899999976543 346789999999999965 899999999975
Q ss_pred C-CCceEEEEEeccCCCChhhhhC
Q 048796 533 P-REQERLLLADYIQGDSLALHLY 555 (555)
Q Consensus 533 ~-~~~~~~lv~e~~~~GsL~~~l~ 555 (555)
. +. +++|||||++|+|.++|+
T Consensus 140 ~~~~--~~iV~Ey~~~G~L~~~L~ 161 (353)
T 4ase_A 140 PGGP--LMVIVEFCKFGNLSTYLR 161 (353)
T ss_dssp TTSC--CEEEEECCTTEEHHHHHH
T ss_pred cCCE--EEEEEEcCCCCCHHHHHH
Confidence 4 34 899999999999999873
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.42 E-value=2.3e-12 Score=132.46 Aligned_cols=227 Identities=12% Similarity=0.131 Sum_probs=177.4
Q ss_pred CCCCEEECCCCcCCCCCCCCCC--CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEee
Q 048796 8 TTLSVLNLSSNSLSGTLPTSLK--SCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIR 85 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 85 (555)
.+|+.++|..| ++.+-..+|. +|+.+.|.+ .++.+....|..+.+|+.++|.+|.++......|. ..+|+.+.|.
T Consensus 135 ~~L~~i~l~~~-i~~I~~~aF~~~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 135 SQIAKVVLNEG-LKSIGDMAFFNSTVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTTCCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CCccEEEeCCC-ccEECHHhcCCCCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 37999999877 6644444553 688999986 78878888999999999999999999966666676 6899999998
Q ss_pred CCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEc
Q 048796 86 NNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDL 165 (555)
Q Consensus 86 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~L 165 (555)
++ ++.+...+|..+++|+.++|..| ++.....+|.. .+|+.+.|. +.++.....+|..+ ++|+.+++
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c---------~~L~~l~l 278 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYC---------PELAEVTT 278 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTC---------TTCCEEEE
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCC---------CCCCEEEe
Confidence 54 77677789999999999999876 55444555655 799999995 44665555566555 89999999
Q ss_pred cCCcCC-----CcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEeccCC
Q 048796 166 SGNALT-----GVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSYND 239 (555)
Q Consensus 166 s~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~N~ 239 (555)
.+|.+. .+.+.+|.+|++|+.++|. +.++.....+|.++++|+.++|..| ++......|. .+|+.+++++|.
T Consensus 279 ~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l~~n~ 356 (401)
T 4fdw_A 279 YGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKVEGTT 356 (401)
T ss_dssp ESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEECCSS
T ss_pred CCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEEcCCC
Confidence 998875 4667789999999999999 4587777789999999999999665 6644455554 589999999998
Q ss_pred CCCCcCccccCCC
Q 048796 240 LSGPIPENLRNFP 252 (555)
Q Consensus 240 l~~~~p~~l~~~~ 252 (555)
+....+..|..++
T Consensus 357 ~~~l~~~~F~~~~ 369 (401)
T 4fdw_A 357 PPQVFEKVWYGFP 369 (401)
T ss_dssp CCBCCCSSCCCSC
T ss_pred CcccccccccCCC
Confidence 8755544454443
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.41 E-value=7.6e-15 Score=159.39 Aligned_cols=235 Identities=19% Similarity=0.185 Sum_probs=111.5
Q ss_pred CCCCCEEECCCCcCCCCCC----CCCCCCCEEEcCCC-cCCCC-CcccccCCCCccEEEccCCcCCCCCCccc----cCC
Q 048796 7 STTLSVLNLSSNSLSGTLP----TSLKSCVILDLSRN-MISGD-ISDMQNWEANLEILDLSSNKLSGSLPNLT----SQF 76 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~----~~l~~L~~L~L~~N-~l~~~-~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~----~~l 76 (555)
+++|++|+|++|.+++..+ ..+++|++|+|++| .++.. .+.....+++|++|+|++|.+++..+..+ ..+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 4455555555555543222 12445555555555 33221 12223334455555555555543322222 234
Q ss_pred CCccEEEeeCCc--CCC-CCchhccCCCCccEEEcCCC-cCCCCCchhhhCCCCCCeEEccCCc-------ccccCCcCc
Q 048796 77 DRLSTFNIRNNS--VTG-TLPSLLEISPRLVTLDVSSN-QLKGPIPDNFFSSMALTNLNLSGNG-------FSGAIPLRS 145 (555)
Q Consensus 77 ~~L~~L~L~~N~--l~~-~~~~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~~~~L~~L~Ls~N~-------l~~~~p~~~ 145 (555)
++|++|+|++|. +.. .+...+..+++|+.|+|++| .+. .++..+..+++|+.|++..+. +.+. +..+
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l-~~~l 261 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGL-SVAL 261 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHH-HHHH
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHH-HHHH
Confidence 455555555554 110 01111233455555555555 222 244444455555555543331 1100 0011
Q ss_pred ccccccccc---------------CCCCCcCEEEccCCcCCCcCCc-cccCccccceeecccccccCC-CchhccCCCCC
Q 048796 146 SHASELLVL---------------PSYPPMESLDLSGNALTGVLPS-DIGNMGRLRLLNLANNHLSGK-MPSELSKLGAL 208 (555)
Q Consensus 146 ~~~~~l~~l---------------~~~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L 208 (555)
..+..+..+ ..+++|++|+|++|.+++.... .+..+++|+.|++++| ++.. ++.....+++|
T Consensus 262 ~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L 340 (594)
T 2p1m_B 262 SGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDL 340 (594)
T ss_dssp HTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTC
T ss_pred hcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCC
Confidence 111111110 1347788888888887643222 2456788888888877 4322 22222346778
Q ss_pred CEEeC---------CCCcCCCCCChhhh---cCCCEEEeccCCCCCCc
Q 048796 209 EYLDL---------SGNQFKGEIPDKLS---LKLNEFNVSYNDLSGPI 244 (555)
Q Consensus 209 ~~L~L---------s~N~l~~~~p~~~~---~~L~~L~ls~N~l~~~~ 244 (555)
+.|++ +.|.+++.....+. ++|+.|+++.|.+++..
T Consensus 341 ~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~ 388 (594)
T 2p1m_B 341 RELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAA 388 (594)
T ss_dssp CEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHH
T ss_pred CEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHH
Confidence 88877 33455532222222 57788877777776543
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=99.40 E-value=2.3e-13 Score=131.93 Aligned_cols=82 Identities=21% Similarity=0.376 Sum_probs=67.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||+||+|+. .+|+.||||.++.... ...+.+.+|+.+|++++|||||++++++.+.+. .|+|||||
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~--~~ivmEy~ 95 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDE--IIMVIEYA 95 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCE--EEEEEeCC
Confidence 67899999999999997 6799999999965322 235679999999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+|+|.++|
T Consensus 96 -~g~L~~~l 103 (275)
T 3hyh_A 96 -GNELFDYI 103 (275)
T ss_dssp -CEEHHHHH
T ss_pred -CCCHHHHH
Confidence 67998875
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.3e-13 Score=135.64 Aligned_cols=83 Identities=24% Similarity=0.393 Sum_probs=66.3
Q ss_pred CCeeecCCceEEEEEEe----CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL----DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||+||+|+. .+++.||||.++.... .....+.+|+.+|++++|||||++++++.+.+. .|+|||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~--~~ivmE 106 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGK--LYLILD 106 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTE--EEEEEC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCE--EEEEEE
Confidence 67999999999999985 2578999999965322 234568899999999999999999999998777 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
||+||+|.++|
T Consensus 107 y~~gg~L~~~l 117 (304)
T 3ubd_A 107 FLRGGDLFTRL 117 (304)
T ss_dssp CCTTCEEHHHH
T ss_pred cCCCCCHHHHH
Confidence 99999999876
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=7.9e-15 Score=149.36 Aligned_cols=161 Identities=19% Similarity=0.165 Sum_probs=71.9
Q ss_pred CccEEEccCCcCCCCCCcccc-----CCCCccEEEeeCCcCCCCCchhc-cCCCCccEEEcCCCcCCCCCchhh-----h
Q 048796 54 NLEILDLSSNKLSGSLPNLTS-----QFDRLSTFNIRNNSVTGTLPSLL-EISPRLVTLDVSSNQLKGPIPDNF-----F 122 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~~~~~l-~~l~~L~~L~L~~N~l~~~~~~~~-----~ 122 (555)
+|+.|+|++|.|+......+. ...+|++|+|++|.|+......+ ..+++|+.|+|++|.|+......+ .
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 466666666666532222221 12456666666666543222222 233456666666666543222222 1
Q ss_pred CCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcC----CccccCccccceeecccccccCC-
Q 048796 123 SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVL----PSDIGNMGRLRLLNLANNHLSGK- 197 (555)
Q Consensus 123 ~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~- 197 (555)
..++|+.|+|++|.|+......+.. .+...++|++|+|++|.|++.. +..+..+++|+.|+|++|.|++.
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~-----~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g 227 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLME-----GLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTA 227 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHH-----HHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHH
T ss_pred cCCccceeeCCCCCCChHHHHHHHH-----HHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHH
Confidence 2345556666655554321111110 0112245555555555554321 22333444555555555555432
Q ss_pred ---CchhccCCCCCCEEeCCCCcCC
Q 048796 198 ---MPSELSKLGALEYLDLSGNQFK 219 (555)
Q Consensus 198 ---~~~~~~~l~~L~~L~Ls~N~l~ 219 (555)
+...+...++|++|||++|.|+
T Consensus 228 ~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 228 ALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred HHHHHHHHHhCCCCCEEeccCCCCC
Confidence 1222233455555555555554
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.2e-12 Score=140.76 Aligned_cols=83 Identities=22% Similarity=0.423 Sum_probs=75.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|+.||||.+........+.+.+|+.+|+.++|||||++++++.+.+. +|+|||||++|
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~--~~iv~E~~~gg 239 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNE--MVMIYEFMSGG 239 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSE--EEEEEECCCCC
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE--EEEEEeecCCC
Confidence 67899999999999997 6899999999977666667789999999999999999999999998776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.++|
T Consensus 240 ~L~~~i 245 (573)
T 3uto_A 240 ELFEKV 245 (573)
T ss_dssp BHHHHH
T ss_pred cHHHHH
Confidence 999876
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.8e-14 Score=146.67 Aligned_cols=172 Identities=19% Similarity=0.149 Sum_probs=121.4
Q ss_pred CCCCCEEEcCCCcCCCCCccc----cc-CCCCccEEEccCCcCCCCCCccc-cCCCCccEEEeeCCcCCCCCchhc----
Q 048796 28 LKSCVILDLSRNMISGDISDM----QN-WEANLEILDLSSNKLSGSLPNLT-SQFDRLSTFNIRNNSVTGTLPSLL---- 97 (555)
Q Consensus 28 l~~L~~L~L~~N~l~~~~~~~----~~-~~~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~l---- 97 (555)
++.|+.|+|++|.|+...... +. ...+|++|+|++|.|++.....+ ..+.+|++|+|++|.|+......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 357899999999997543222 22 23579999999999875333322 346789999999999985544443
Q ss_pred -cCCCCccEEEcCCCcCCC----CCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCC
Q 048796 98 -EISPRLVTLDVSSNQLKG----PIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTG 172 (555)
Q Consensus 98 -~~l~~L~~L~L~~N~l~~----~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~ 172 (555)
...++|++|+|++|.|+. .++..+..+++|++|+|++|.|+......+.. .+...++|+.|+|++|.|++
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~-----~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAA-----QLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHH-----HGGGCSCCCEEECCSSCCCH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHH-----HHhcCCCcCeEECCCCCCCH
Confidence 346889999999999864 23445577899999999999987532211111 12233789999999999986
Q ss_pred cCC----ccccCccccceeecccccccCCCchhccC
Q 048796 173 VLP----SDIGNMGRLRLLNLANNHLSGKMPSELSK 204 (555)
Q Consensus 173 ~~p----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 204 (555)
... ..+..+++|+.|+|++|.|+......+..
T Consensus 226 ~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 226 TAALALARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 433 34455689999999999998655555543
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.30 E-value=6.3e-12 Score=126.88 Aligned_cols=131 Identities=21% Similarity=0.144 Sum_probs=76.3
Q ss_pred EEcCCC-cCCCCCchhhhCCCCCCeEEccC-CcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccc
Q 048796 106 LDVSSN-QLKGPIPDNFFSSMALTNLNLSG-NGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGR 183 (555)
Q Consensus 106 L~L~~N-~l~~~~~~~~~~~~~L~~L~Ls~-N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 183 (555)
++++++ +|+ .+|. +..+.+|+.|+|++ |.|++..+..|..+ ++|+.|+|++|+|++..|..|..+++
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l---------~~L~~L~l~~N~l~~~~~~~~~~l~~ 81 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGL---------GELRNLTIVKSGLRFVAPDAFHFTPR 81 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSC---------CCCSEEECCSSCCCEECTTGGGSCSC
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccc---------cCCCEEECCCCccceeCHHHhcCCcC
Confidence 455554 554 3444 55555555555553 55555444444444 66666666666666666667777777
Q ss_pred cceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChh-hh--cCCCEEEeccCCCCCCcCccc
Q 048796 184 LRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDK-LS--LKLNEFNVSYNDLSGPIPENL 248 (555)
Q Consensus 184 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~--~~L~~L~ls~N~l~~~~p~~l 248 (555)
|+.|+|++|+|++..+..|..++ |+.|+|++|.|....... +. .......+..+.+.|..|..+
T Consensus 82 L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~~l 148 (347)
T 2ifg_A 82 LSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQGPL 148 (347)
T ss_dssp CCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSSCS
T ss_pred CCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCChHH
Confidence 77777777777765555555554 778888888777543322 11 122223345566676666533
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.28 E-value=4.6e-12 Score=129.69 Aligned_cols=85 Identities=18% Similarity=0.289 Sum_probs=70.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC----CceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR----EQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~----~~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+.+|+.++|||||++++++.... ...+|+||
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivm 138 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEE
Confidence 67899999999999997 689999999996532 234577899999999999999999999876431 12389999
Q ss_pred eccCCCChhhhhC
Q 048796 543 DYIQGDSLALHLY 555 (555)
Q Consensus 543 e~~~~GsL~~~l~ 555 (555)
|||+ |+|.++|+
T Consensus 139 E~~~-g~L~~~i~ 150 (398)
T 4b99_A 139 DLME-SDLHQIIH 150 (398)
T ss_dssp ECCS-EEHHHHHT
T ss_pred eCCC-CCHHHHHH
Confidence 9996 67988763
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=8.6e-12 Score=124.39 Aligned_cols=83 Identities=25% Similarity=0.448 Sum_probs=75.7
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.++||+|+||.||+|+..+|+.||||++........+.|.+|+.+++.++||||+++++++...+. .++||||+++|+
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~~~ 121 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE--MILIYKYMENGN 121 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC--CEEEEECCTTCB
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe--EEEEEEcCCCCc
Confidence 789999999999999988899999999876655567889999999999999999999999987776 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 122 L~~~l 126 (321)
T 2qkw_B 122 LKRHL 126 (321)
T ss_dssp TGGGS
T ss_pred HHHHH
Confidence 99876
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.2e-11 Score=122.56 Aligned_cols=83 Identities=27% Similarity=0.447 Sum_probs=75.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.++||+|+||.||+|+. .++..||+|.+........+.|.+|+.++.+++||||+++++++...+. .++||||+++|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~~~~ 92 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKR--LNFITEYIKGG 92 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE--EEEEEECCTTC
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCe--eEEEEEecCCC
Confidence 78999999999999997 5799999999976666667889999999999999999999999998776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 93 ~L~~~l 98 (310)
T 3s95_A 93 TLRGII 98 (310)
T ss_dssp BHHHHH
T ss_pred cHHHHH
Confidence 999876
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.5e-11 Score=122.70 Aligned_cols=82 Identities=23% Similarity=0.327 Sum_probs=73.9
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
+.||+|+||.||+|+. .+|+.||||.+........+.+.+|+.++++++||||+++++++...+. .++||||+++|+
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~~~~~~ 128 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEE--LWVLMEFLQGGA 128 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE--EEEEECCCCSCB
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCE--EEEEEecCCCCC
Confidence 4799999999999998 4799999999976655567889999999999999999999999988776 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 129 L~~~l 133 (321)
T 2c30_A 129 LTDIV 133 (321)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98876
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=2e-11 Score=120.38 Aligned_cols=83 Identities=23% Similarity=0.370 Sum_probs=74.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|+.||||.+........+.+.+|+.+++.++||||+++++++...+. .++||||+++|
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~~~~ 102 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE--LWVVMEYLAGG 102 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECCTTC
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCE--EEEEEECCCCC
Confidence 78999999999999996 6799999999976555556789999999999999999999999988776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 103 ~L~~~~ 108 (297)
T 3fxz_A 103 SLTDVV 108 (297)
T ss_dssp BHHHHH
T ss_pred CHHHHH
Confidence 999875
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=99.22 E-value=1.7e-11 Score=131.78 Aligned_cols=91 Identities=22% Similarity=0.374 Sum_probs=71.8
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHH---HHHHHHHHcCCCCcceeeeEEEEc
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEF---AKEVKKIGSMRHPNIVPLRAYYWG 532 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~---~~ei~~l~~l~H~niv~l~g~~~~ 532 (555)
++++|... .++||+|+||.||+|+. .+|+.||||.++.... .....+ ..++.+++.++|||||++++++.+
T Consensus 186 ~slddf~i--~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~ 263 (689)
T 3v5w_A 186 LTMNDFSV--HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT 263 (689)
T ss_dssp CCGGGEEE--EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC
T ss_pred CchHHeEE--EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE
Confidence 44444443 67999999999999997 6799999999964321 122223 344667788999999999999998
Q ss_pred CCCceEEEEEeccCCCChhhhh
Q 048796 533 PREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 533 ~~~~~~~lv~e~~~~GsL~~~l 554 (555)
.+. +|+|||||+||+|.++|
T Consensus 264 ~~~--lylVmEy~~GGdL~~~l 283 (689)
T 3v5w_A 264 PDK--LSFILDLMNGGDLHYHL 283 (689)
T ss_dssp SSE--EEEEECCCCSCBHHHHH
T ss_pred CCE--EEEEEecCCCCcHHHHH
Confidence 877 99999999999999886
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.22 E-value=3.1e-11 Score=121.77 Aligned_cols=66 Identities=24% Similarity=0.219 Sum_probs=27.4
Q ss_pred ccCCCCccEEEeeC-CcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCccc
Q 048796 73 TSQFDRLSTFNIRN-NSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 73 ~~~l~~L~~L~L~~-N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
+..+.+|++|+|++ |.|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 93 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE 93 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccc
Confidence 33444444444442 4444333334444444444444444444333334444444444444444444
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.5e-11 Score=123.71 Aligned_cols=83 Identities=22% Similarity=0.422 Sum_probs=69.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.++||+|+||.||+|+. .+|+.||||.++.......+.|.+|+.++.+++||||+++++++...+. .++||||+++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~--~~lv~E~~~~~ 171 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKND--IVLVMEYVDGG 171 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEEECCTTC
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE--EEEEEeCCCCC
Confidence 46799999999999997 6799999999987666667889999999999999999999999998766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 172 ~L~~~l 177 (373)
T 2x4f_A 172 ELFDRI 177 (373)
T ss_dssp EEHHHH
T ss_pred cHHHHH
Confidence 998765
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.18 E-value=3e-11 Score=123.17 Aligned_cols=83 Identities=24% Similarity=0.496 Sum_probs=72.2
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|+.. ++..||||.++... ....+.|.+|+.++++++||||++++++|...+. .++||||
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~ 127 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP--VMIVTEY 127 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS--CEEEEEC
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCc--eEEEEeC
Confidence 789999999999999863 57789999997643 3346789999999999999999999999987776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 128 ~~~~sL~~~l 137 (373)
T 2qol_A 128 MENGSLDSFL 137 (373)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999999876
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=2.9e-11 Score=122.37 Aligned_cols=81 Identities=16% Similarity=0.263 Sum_probs=69.9
Q ss_pred CCeeecCCceEEEEEEe----CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL----DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||+||+|+. ..++.||||.+.... ....+.+|+.+|..+ +|||||++++++.+.+. .|+||||
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~--~~lvmE~ 101 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH--VVIAMPY 101 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE--EEEEEEC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE--EEEEEeC
Confidence 67899999999999975 246789999986543 346788999999988 69999999999988777 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
|++|+|.+++
T Consensus 102 ~~g~~L~~~~ 111 (361)
T 4f9c_A 102 LEHESFLDIL 111 (361)
T ss_dssp CCCCCHHHHH
T ss_pred CCcccHHHHH
Confidence 9999999876
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=6.6e-11 Score=114.69 Aligned_cols=82 Identities=17% Similarity=0.295 Sum_probs=73.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|+..++..||||.+..... ..+++.+|+.++.+++||||+++++++...+. .++||||+++|+
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~~ 91 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGC 91 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS--EEEEEECCTTCB
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCc--eEEEEEeCCCCc
Confidence 678999999999999987888999999975432 35779999999999999999999999988777 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 92 L~~~l 96 (269)
T 4hcu_A 92 LSDYL 96 (269)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99876
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.16 E-value=7.7e-11 Score=117.87 Aligned_cols=83 Identities=19% Similarity=0.271 Sum_probs=73.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||.+... .....+.+.+|+.+++.++||||+++++++...+. .++||||++
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~--~~lv~e~~~ 97 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKT--LYLIMEYAS 97 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEECCCT
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCE--EEEEEECCC
Confidence 67899999999999997 68999999999653 23345678999999999999999999999987766 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 98 ~~~L~~~l 105 (328)
T 3fe3_A 98 GGEVFDYL 105 (328)
T ss_dssp TCBHHHHH
T ss_pred CCcHHHHH
Confidence 99998876
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=3e-11 Score=120.66 Aligned_cols=95 Identities=34% Similarity=0.544 Sum_probs=78.3
Q ss_pred cccCHHHHhccc-----CCeeecCCceEEEEEEeCCCCEEEEEEeccCChh-cHHHHHHHHHHHHcCCCCcceeeeEEEE
Q 048796 458 LAFTAEELSRAP-----AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRAYYW 531 (555)
Q Consensus 458 ~~~~~~~l~~~~-----~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~-~~~~~~~ei~~l~~l~H~niv~l~g~~~ 531 (555)
..|+.+++.... .+.||+|+||.||+|+..+|+.||||++...... ....|.+|+.+++.++||||++++++|.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 346666666553 5789999999999999878999999999754332 2347899999999999999999999998
Q ss_pred cCCCceEEEEEeccCCCChhhhh
Q 048796 532 GPREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 532 ~~~~~~~~lv~e~~~~GsL~~~l 554 (555)
..+. .++||||+++|+|.+++
T Consensus 98 ~~~~--~~lv~e~~~~~~L~~~l 118 (326)
T 3uim_A 98 TPTE--RLLVYPYMANGSVASCL 118 (326)
T ss_dssp CSSC--CEEEEECCTTCBHHHHH
T ss_pred cCCc--eEEEEEeccCCCHHHHH
Confidence 7776 89999999999998876
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.16 E-value=4.2e-11 Score=117.38 Aligned_cols=83 Identities=13% Similarity=0.150 Sum_probs=73.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.|.+|+..+.+++||||+++++++...+. .|+||||+
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~ 113 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAG--GLVVAEWI 113 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE--EEEEEECC
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCc--EEEEEEec
Confidence 67899999999999998 4689999999975432 234789999999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 114 ~g~~L~~~l 122 (286)
T 3uqc_A 114 RGGSLQEVA 122 (286)
T ss_dssp CEEEHHHHH
T ss_pred CCCCHHHHH
Confidence 999999876
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=3.3e-11 Score=123.11 Aligned_cols=83 Identities=25% Similarity=0.414 Sum_probs=72.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|++ .+++.||||.++.... ...+.|.+|+.+|++++||||++++++|...+. .++||||+++
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~lv~e~~~~ 196 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP--IYIVMELVQG 196 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSS--CEEEEECCTT
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCC--cEEEEEcCCC
Confidence 67899999999999998 4789999999875432 234578999999999999999999999987776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 197 g~L~~~l 203 (377)
T 3cbl_A 197 GDFLTFL 203 (377)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 9999876
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=6.8e-11 Score=119.88 Aligned_cols=83 Identities=24% Similarity=0.403 Sum_probs=73.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh------cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR------HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~------~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|+.||||.+...... ..+.+.+|+.++..++||||+++++++..... .++||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~--~~lv~ 94 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD--VVLIL 94 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEE
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE--EEEEE
Confidence 67899999999999997 57999999999653221 35789999999999999999999999988766 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 95 e~~~gg~L~~~l 106 (361)
T 2yab_A 95 ELVSGGELFDFL 106 (361)
T ss_dssp ECCCSCBHHHHH
T ss_pred EcCCCCcHHHHH
Confidence 999999999876
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=9.5e-11 Score=113.43 Aligned_cols=82 Identities=20% Similarity=0.308 Sum_probs=73.1
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|...++..||||.+..... ..+++.+|+.++.+++||||+++++++..... .++||||+++|+
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~~ 89 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYP--IYIVTEYISNGC 89 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--EEEEEECCTTCB
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCc--eEEEEEccCCCc
Confidence 678999999999999988888899999975433 35779999999999999999999999987777 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 90 L~~~l 94 (268)
T 3sxs_A 90 LLNYL 94 (268)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98875
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.14 E-value=6.9e-11 Score=118.65 Aligned_cols=83 Identities=20% Similarity=0.368 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+++. .+|+.||+|.++... ....+.+.+|+.++..++||||+++++++...+. .++||||+
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~--~~lv~E~~ 87 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDR--LCFVMEYA 87 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCE--EEEEEeCC
Confidence 67899999999999997 579999999996532 2235678999999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 88 ~gg~L~~~l 96 (337)
T 1o6l_A 88 NGGELFFHL 96 (337)
T ss_dssp TTCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999998775
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.14 E-value=4.1e-11 Score=117.81 Aligned_cols=85 Identities=24% Similarity=0.432 Sum_probs=73.3
Q ss_pred CCeeecCCceEEEEEEe-----CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-----DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|++ .+++.||||++........+.|.+|+.++.+++||||++++++|...+....++||||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 94 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 94 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEEC
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEe
Confidence 67899999999999984 3688999999987666667889999999999999999999999865332238999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 95 ~~~~~L~~~l 104 (295)
T 3ugc_A 95 LPYGSLRDYL 104 (295)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999999876
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=8.6e-11 Score=116.54 Aligned_cols=82 Identities=30% Similarity=0.398 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .|+.||||.+.... ....+.|.+|+.++++++||||+++++++...+. .++||||+++
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~~~ 118 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN--LSIVTEYLSR 118 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC--CEEEEECCTT
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc--eEEEEecCCC
Confidence 67899999999999988 68899999986543 2335679999999999999999999999987777 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 119 ~~L~~~l 125 (309)
T 3p86_A 119 GSLYRLL 125 (309)
T ss_dssp CBHHHHH
T ss_pred CcHHHHH
Confidence 9999876
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=5.9e-11 Score=118.61 Aligned_cols=83 Identities=24% Similarity=0.483 Sum_probs=71.9
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|++. .+..||||.+... .....+.|.+|+.++++++||||+++++++...+. .++||||
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~ 131 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL--AMIVTEY 131 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC--CEEEEEC
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc--cEEEeeC
Confidence 679999999999999972 3456999999764 33346789999999999999999999999987766 8999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 132 ~~~~~L~~~l 141 (325)
T 3kul_A 132 MENGSLDTFL 141 (325)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999999876
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=1.6e-10 Score=114.12 Aligned_cols=93 Identities=25% Similarity=0.377 Sum_probs=78.5
Q ss_pred ccCHHHHhccc-----------CCeeecCCceEEEEEEeCCCCEEEEEEeccCC----hhcHHHHHHHHHHHHcCCCCcc
Q 048796 459 AFTAEELSRAP-----------AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGL----VRHKKEFAKEVKKIGSMRHPNI 523 (555)
Q Consensus 459 ~~~~~~l~~~~-----------~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~----~~~~~~~~~ei~~l~~l~H~ni 523 (555)
.|+++++..++ ++.||+|+||.||+|+. +++.||||.+.... ....+.|.+|+.+++.++||||
T Consensus 14 ~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 92 (307)
T 2nru_A 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92 (307)
T ss_dssp ECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTB
T ss_pred cccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCe
Confidence 47777776654 26899999999999998 68899999986432 2335789999999999999999
Q ss_pred eeeeEEEEcCCCceEEEEEeccCCCChhhhh
Q 048796 524 VPLRAYYWGPREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 524 v~l~g~~~~~~~~~~~lv~e~~~~GsL~~~l 554 (555)
+++++++...+. .++||||+++|+|.+++
T Consensus 93 ~~~~~~~~~~~~--~~lv~e~~~~~~L~~~l 121 (307)
T 2nru_A 93 VELLGFSSDGDD--LCLVYVYMPNGSLLDRL 121 (307)
T ss_dssp CCEEEEECSSSS--CEEEEECCTTCBHHHHH
T ss_pred EEEEEEEecCCc--eEEEEEecCCCcHHHHH
Confidence 999999987776 99999999999998875
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.14 E-value=1.2e-10 Score=119.19 Aligned_cols=83 Identities=18% Similarity=0.389 Sum_probs=74.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|.. .+|+.+|+|.+..........+.+|+.++..++||||+++++++..... .++||||+++|
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~--~~lv~E~~~gg 133 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYE--MVLILEFLSGG 133 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSE--EEEEEECCCCC
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCE--EEEEEEcCCCC
Confidence 67899999999999997 5789999999977655566789999999999999999999999987766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 134 ~L~~~l 139 (387)
T 1kob_A 134 ELFDRI 139 (387)
T ss_dssp BHHHHT
T ss_pred cHHHHH
Confidence 998876
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.13 E-value=9.2e-11 Score=118.54 Aligned_cols=83 Identities=19% Similarity=0.397 Sum_probs=71.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-----hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-----VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-----~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.++..++||||+++++++...+. .++|||
T Consensus 29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~--~~lv~e 106 (351)
T 3c0i_A 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM--LYMVFE 106 (351)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEE
T ss_pred eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE--EEEEEe
Confidence 67899999999999997 579999999985321 1236789999999999999999999999988776 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
||++|+|.+++
T Consensus 107 ~~~g~~L~~~l 117 (351)
T 3c0i_A 107 FMDGADLCFEI 117 (351)
T ss_dssp CCSSCBHHHHH
T ss_pred CCCCCCHHHHH
Confidence 99999997654
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1e-10 Score=122.40 Aligned_cols=81 Identities=20% Similarity=0.356 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|.+ .|+.||||.++... ..+.|.+|+.+|++++||||++++++|...+. ..++|||||++|+
T Consensus 198 ~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~iv~e~~~~g~ 273 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGS 273 (450)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS-CEEEEEECCTTCB
T ss_pred EeeecCcCCeeEEEEEe-cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC-ceEEEEEecCCCc
Confidence 67899999999999998 57899999997643 45789999999999999999999999876542 2899999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 274 L~~~l 278 (450)
T 1k9a_A 274 LVDYL 278 (450)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99876
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.2e-10 Score=115.94 Aligned_cols=85 Identities=19% Similarity=0.320 Sum_probs=73.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.++||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++++++||||+++++++........++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCC
Confidence 67999999999999998 5699999999975432 346778999999999999999999999987653338999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 94 ~~L~~~l 100 (319)
T 4euu_A 94 GSLYTVL 100 (319)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 9998876
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.5e-10 Score=114.95 Aligned_cols=83 Identities=18% Similarity=0.272 Sum_probs=73.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
+++||+|+||.||+|+. .+++.||||.+........+.+.+|+.++.++ +||||+++++++...+. .++||||+++
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~--~~lv~e~~~~ 95 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDR--FYLVFEKMRG 95 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE--EEEEEECCTT
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCE--EEEEEEcCCC
Confidence 46899999999999996 57999999999765555577899999999884 79999999999988776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 96 ~~L~~~l 102 (316)
T 2ac3_A 96 GSILSHI 102 (316)
T ss_dssp CBHHHHH
T ss_pred CcHHHHH
Confidence 9998876
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=8.3e-11 Score=115.14 Aligned_cols=83 Identities=18% Similarity=0.267 Sum_probs=73.4
Q ss_pred CCeeecCCceEEEEEEe-CCC-------CEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSG-------HMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g-------~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|+. .++ ..||+|.+........+.|.+|+.++++++||||+++++++...+. .++|
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv 90 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE--NILV 90 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC--CEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC--CEEE
Confidence 67899999999999986 334 4799999977666667889999999999999999999999988776 8999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 91 ~e~~~~~~L~~~l 103 (289)
T 4fvq_A 91 QEFVKFGSLDTYL 103 (289)
T ss_dssp EECCTTCBHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 9999999999876
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.7e-10 Score=115.37 Aligned_cols=83 Identities=20% Similarity=0.404 Sum_probs=72.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|..||||.+..... ...+.+.+|+.++..++||||+++++++..... .++||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~ 93 (326)
T 2y0a_A 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD--VILIL 93 (326)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEE
T ss_pred ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE--EEEEE
Confidence 67899999999999997 5799999999864322 136789999999999999999999999987766 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 94 e~~~~~~L~~~l 105 (326)
T 2y0a_A 94 ELVAGGELFDFL 105 (326)
T ss_dssp ECCCSCBHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 999999999876
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.13 E-value=8.2e-11 Score=119.79 Aligned_cols=83 Identities=18% Similarity=0.262 Sum_probs=71.7
Q ss_pred CCeeecCCceEEEEEEe--------CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEE
Q 048796 470 AEVLGRSSHGTLYKATL--------DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--------~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 539 (555)
.+.||+|+||.||+|+. .++..||||.++... ....+.+.+|+.++..+ +||||++++++|...+. .|
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~--~~ 163 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP--LY 163 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSS--CE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCC--EE
Confidence 67899999999999985 235679999997543 33457899999999999 89999999999988777 99
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+||||+++|+|.+++
T Consensus 164 lv~e~~~~g~L~~~l 178 (370)
T 2psq_A 164 VIVEYASKGNLREYL 178 (370)
T ss_dssp EEEECCTTCBHHHHH
T ss_pred EEEEcCCCCCHHHHH
Confidence 999999999999876
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.13 E-value=9.5e-11 Score=116.88 Aligned_cols=82 Identities=23% Similarity=0.341 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|..+|+|.+.... ...+.+.+|+.++..++||||+++++++.+.+. .++||||+++|
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~--~~lv~e~~~g~ 86 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEE--LVMIFEFISGL 86 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTE--EEEEECCCCCC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCE--EEEEEEeCCCC
Confidence 67899999999999997 578899999987543 345678999999999999999999999988776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 87 ~L~~~l 92 (321)
T 1tki_A 87 DIFERI 92 (321)
T ss_dssp BHHHHH
T ss_pred CHHHHH
Confidence 999876
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.3e-10 Score=113.45 Aligned_cols=82 Identities=20% Similarity=0.319 Sum_probs=70.4
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|.+.++..||||.+..... ..+++.+|+.++.+++||||+++++++...+. .++||||+++|+
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~~ 105 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP--IFIITEYMANGC 105 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS--EEEEECCCTTCB
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCC--eEEEEeccCCCc
Confidence 678999999999999998888999999975433 35779999999999999999999999987777 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 106 L~~~l 110 (283)
T 3gen_A 106 LLNYL 110 (283)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98876
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.7e-10 Score=115.15 Aligned_cols=64 Identities=20% Similarity=0.367 Sum_probs=54.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP 533 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~ 533 (555)
.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+.++++++||||++++++|...
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 76 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLET 76 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEEC
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEe
Confidence 67899999999999998 489999999996533 23467899999999999999999999998654
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.12 E-value=6e-11 Score=125.67 Aligned_cols=82 Identities=22% Similarity=0.327 Sum_probs=73.4
Q ss_pred CCeeecCCceEEEEEEeC-CCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATLD-SGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|++. ++..||||.++.... ..++|.+|+.+|++++||||++++++|...+. .++|||||++|
T Consensus 225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~--~~lv~E~~~~g 301 (495)
T 1opk_A 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYG 301 (495)
T ss_dssp EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CEEEEECCTTC
T ss_pred eeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCc--EEEEEEccCCC
Confidence 678999999999999984 588999999976433 46789999999999999999999999987777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.++|
T Consensus 302 ~L~~~l 307 (495)
T 1opk_A 302 NLLDYL 307 (495)
T ss_dssp BHHHHH
T ss_pred CHHHHH
Confidence 999876
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.11 E-value=8.9e-11 Score=122.98 Aligned_cols=81 Identities=21% Similarity=0.338 Sum_probs=72.2
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|.+.++..||||.++... ...+.|.+|+.+|+.++||||+++++++. .+. .++|||||++|+
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~--~~lv~e~~~~g~ 268 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEP--IYIITEFMAKGS 268 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS--CEEEECCCTTCB
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCc--cEEEEeecCCCc
Confidence 67899999999999999778899999997643 34688999999999999999999999986 344 899999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.++|
T Consensus 269 L~~~l 273 (454)
T 1qcf_A 269 LLDFL 273 (454)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99886
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=7.4e-11 Score=114.16 Aligned_cols=84 Identities=25% Similarity=0.419 Sum_probs=72.3
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|++ .|..+|||.+.... ....+.|.+|+.++++++||||+++++++...+....++||||+++
T Consensus 15 ~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93 (271)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred HHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence 67899999999999998 58899999997542 3345789999999999999999999999987632238999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 94 ~~L~~~l 100 (271)
T 3kmu_A 94 GSLYNVL 100 (271)
T ss_dssp CBHHHHH
T ss_pred CcHHHHH
Confidence 9999876
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.8e-10 Score=111.97 Aligned_cols=83 Identities=22% Similarity=0.311 Sum_probs=74.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .++..+|+|++........+.+.+|+.++++++||||+++++++...+. .++||||+++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~ 91 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTD--IYLVMELCTGG 91 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEEECCCSC
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCe--EEEEEeccCCC
Confidence 67899999999999997 5678999999976555567889999999999999999999999987766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 92 ~L~~~~ 97 (277)
T 3f3z_A 92 ELFERV 97 (277)
T ss_dssp BHHHHH
T ss_pred cHHHHH
Confidence 998765
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.11 E-value=1e-10 Score=116.49 Aligned_cols=83 Identities=20% Similarity=0.360 Sum_probs=72.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+|+.||+|.++... ....+.+.+|+.+++.++||||+++++++.+.+. .++||||+
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~--~~lv~e~~ 88 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQ--IFMIMDYI 88 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCE--EEEEEeCC
Confidence 67899999999999997 579999999996532 1235678899999999999999999999987766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 89 ~gg~L~~~l 97 (318)
T 1fot_A 89 EGGELFSLL 97 (318)
T ss_dssp CSCBHHHHH
T ss_pred CCCCHHHHH
Confidence 999999876
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=7.3e-11 Score=117.84 Aligned_cols=83 Identities=18% Similarity=0.216 Sum_probs=70.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+++.||||.+..... ...+.+.+|+.+++.++||||+++++++...+. .++||||+++
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~--~~lv~e~~~~ 89 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI--QYLFLEYCSG 89 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEEECCTT
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCe--EEEEEEcCCC
Confidence 67899999999999997 5799999999864432 234678999999999999999999999998776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 90 ~~L~~~l 96 (323)
T 3tki_A 90 GELFDRI 96 (323)
T ss_dssp EEGGGGS
T ss_pred CcHHHHH
Confidence 9998876
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.4e-10 Score=116.75 Aligned_cols=83 Identities=20% Similarity=0.286 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC-----ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG-----LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~-----~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .++..||+|.+... .....+.+.+|+.++++++||||+++++++...+. .++|||
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~lv~e 108 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQY--ICLVME 108 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEEE
T ss_pred cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCe--EEEEEe
Confidence 67899999999999997 67889999998543 22345789999999999999999999999988776 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 109 ~~~gg~L~~~l 119 (345)
T 3hko_A 109 LCHGGHLLDKL 119 (345)
T ss_dssp CCCSCBHHHHE
T ss_pred CCCCCcHHHHH
Confidence 99999999876
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.4e-10 Score=114.11 Aligned_cols=83 Identities=23% Similarity=0.272 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+++.||+|.+.... ....+.|.+|+.++.+++||||+++++++...+. .++||||+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~ 93 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDC--YYLVMEYI 93 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSE--EEEEEECC
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCe--EEEEEeCC
Confidence 67899999999999997 578999999985432 2335779999999999999999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 94 ~g~~L~~~l 102 (294)
T 4eqm_A 94 EGPTLSEYI 102 (294)
T ss_dssp CSCBHHHHH
T ss_pred CCCCHHHHH
Confidence 999999875
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.6e-10 Score=113.35 Aligned_cols=83 Identities=19% Similarity=0.243 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
..+||+|+||.||+|+. .+++.||||.+........+.+.+|+.++..++||||+++++++...+. .++||||+++|
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~~ 104 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGF--IKIFMEQVPGG 104 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTE--EEEEEECCSEE
T ss_pred cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCc--EEEEEEeCCCC
Confidence 45899999999999997 6789999999976655556789999999999999999999999987776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 105 ~L~~~l 110 (295)
T 2clq_A 105 SLSALL 110 (295)
T ss_dssp EHHHHH
T ss_pred CHHHHH
Confidence 998875
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.10 E-value=1.2e-10 Score=121.93 Aligned_cols=82 Identities=22% Similarity=0.356 Sum_probs=72.3
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|.+.++..||||.++.... ..++|.+|+.+|++++||||+++++++.. +. .++|||||++|+
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~--~~iv~e~~~~gs 264 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP--IYIVTEYMSKGS 264 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS--CEEEECCCTTCB
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-Cc--eEEEehhhcCCC
Confidence 678999999999999997778899999976442 46789999999999999999999999875 44 899999999999
Q ss_pred hhhhhC
Q 048796 550 LALHLY 555 (555)
Q Consensus 550 L~~~l~ 555 (555)
|.++++
T Consensus 265 L~~~l~ 270 (452)
T 1fmk_A 265 LLDFLK 270 (452)
T ss_dssp HHHHHS
T ss_pred HHHHHH
Confidence 998873
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=5.5e-11 Score=123.52 Aligned_cols=83 Identities=20% Similarity=0.259 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+|+. .+++.||||++..... ...+.+.+|+.++..++||||++++++|.+.+. .|+|||||
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~--~~lV~Ey~ 156 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNN--LYLVMDYY 156 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCE--EEEEEecC
Confidence 67899999999999998 4688999999964322 123348899999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.++|
T Consensus 157 ~gg~L~~~l 165 (437)
T 4aw2_A 157 VGGDLLTLL 165 (437)
T ss_dssp TTCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999999876
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.10 E-value=2.2e-10 Score=116.26 Aligned_cols=83 Identities=20% Similarity=0.324 Sum_probs=72.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.+++.++||||+++++++...+. .++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~--~~lv~e~~~ 111 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESF--HYLVFDLVT 111 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEECCCC
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE--EEEEEecCC
Confidence 67899999999999997 579999999996532 2345678999999999999999999999998776 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 112 gg~L~~~l 119 (362)
T 2bdw_A 112 GGELFEDI 119 (362)
T ss_dssp SCBHHHHH
T ss_pred CCCHHHHH
Confidence 99998775
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.6e-10 Score=118.81 Aligned_cols=86 Identities=19% Similarity=0.306 Sum_probs=73.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.++||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++++++||||+++++++...+....++||||+++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~ 93 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCC
Confidence 67999999999999998 5699999999975432 346778899999999999999999999987653338999999999
Q ss_pred CChhhhhC
Q 048796 548 DSLALHLY 555 (555)
Q Consensus 548 GsL~~~l~ 555 (555)
|+|.+++.
T Consensus 94 g~L~~~l~ 101 (396)
T 4eut_A 94 GSLYTVLE 101 (396)
T ss_dssp EEHHHHTT
T ss_pred CCHHHHHH
Confidence 99998763
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.2e-10 Score=124.41 Aligned_cols=82 Identities=22% Similarity=0.356 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|++.++..||||.++.... ..++|.+|+.+|++++||||++++++|.. +. .++|||||++|+
T Consensus 272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~--~~lv~e~~~~gs 347 (535)
T 2h8h_A 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP--IYIVTEYMSKGS 347 (535)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS--CEEEECCCTTEE
T ss_pred heecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-cc--ceEeeehhcCCc
Confidence 678999999999999997778899999976442 46789999999999999999999999875 44 899999999999
Q ss_pred hhhhhC
Q 048796 550 LALHLY 555 (555)
Q Consensus 550 L~~~l~ 555 (555)
|.++|+
T Consensus 348 L~~~l~ 353 (535)
T 2h8h_A 348 LLDFLK 353 (535)
T ss_dssp HHHHHS
T ss_pred HHHHHh
Confidence 998874
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.09 E-value=2.3e-10 Score=114.27 Aligned_cols=80 Identities=23% Similarity=0.338 Sum_probs=70.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
++.||+|+||.||+|+. .+|+.||||.+... ....+.+|+.++..+. ||||+++++++.+... .++||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~--~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLH--TFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--EEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCE--EEEEEEccCC
Confidence 57899999999999998 57899999998643 3467889999999997 9999999999998776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 91 ~~L~~~l 97 (325)
T 3kn6_A 91 GELFERI 97 (325)
T ss_dssp CBHHHHH
T ss_pred CcHHHHH
Confidence 9998875
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=5.7e-11 Score=122.44 Aligned_cols=83 Identities=18% Similarity=0.245 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+|+. .+++.||+|++..... ...+.+.+|+.++..++|||||++++++.+.+. .|+|||||
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~--~~lV~E~~ 151 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY--LYMVMEYM 151 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE--EEEEEeCC
Confidence 67899999999999998 5789999999864211 123458899999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 152 ~gg~L~~~l 160 (410)
T 3v8s_A 152 PGGDLVNLM 160 (410)
T ss_dssp TTEEHHHHH
T ss_pred CCCcHHHHH
Confidence 999998876
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.4e-10 Score=116.46 Aligned_cols=83 Identities=23% Similarity=0.330 Sum_probs=72.3
Q ss_pred CCeeecCCceEEEEEEeC------CCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|+.. +++.||||.++... ....+.|.+|+.++.+++||||++++++|...+. .++||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~ 129 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP--MCLLF 129 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS--CEEEE
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc--eEEEE
Confidence 678999999999999973 34789999997543 3346789999999999999999999999988777 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 130 e~~~~~~L~~~l 141 (343)
T 1luf_A 130 EYMAYGDLNEFL 141 (343)
T ss_dssp ECCTTCBHHHHH
T ss_pred ecCCCCcHHHHH
Confidence 999999999876
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=2.3e-10 Score=114.35 Aligned_cols=85 Identities=22% Similarity=0.421 Sum_probs=74.4
Q ss_pred CCeeecCCceEEEEEEe-----CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-----DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|++ .+++.||||++........+.+.+|+.++++++||||+++++++...+....++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 107 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 107 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEEC
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEee
Confidence 67999999999999984 4688999999987666667789999999999999999999999875444458999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 108 ~~~~~L~~~l 117 (327)
T 3lxl_A 108 LPSGCLRDFL 117 (327)
T ss_dssp CTTCBHHHHH
T ss_pred cCCCCHHHHH
Confidence 9999999876
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.08 E-value=1.6e-10 Score=118.47 Aligned_cols=83 Identities=22% Similarity=0.294 Sum_probs=73.2
Q ss_pred CCeeecC--CceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRS--SHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G--~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+| +||.||+|+. .+|+.||||++.... ....+.+.+|+.+++.++|||||++++++...+. .++||||
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~ 107 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE--LWVVTSF 107 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEEC
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE--EEEEEEc
Confidence 7799999 9999999998 579999999996532 2335678899999999999999999999998776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
|++|+|.+++
T Consensus 108 ~~~~~L~~~l 117 (389)
T 3gni_B 108 MAYGSAKDLI 117 (389)
T ss_dssp CTTCBHHHHH
T ss_pred cCCCCHHHHH
Confidence 9999998876
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=1.6e-10 Score=115.62 Aligned_cols=83 Identities=22% Similarity=0.438 Sum_probs=66.7
Q ss_pred CCeeecCCceEEEEEEe----CCCCEEEEEEeccCC----hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL----DSGHMLTVKWLRVGL----VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~----~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.++||+|+||.||+++. .+|+.||+|.++... ......+.+|+.+++.++||||+++++++...+. .++|
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv 99 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK--LYLI 99 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC--EEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE--EEEE
Confidence 67999999999999986 478999999997542 2234568899999999999999999999998777 9999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 100 ~e~~~~~~L~~~l 112 (327)
T 3a62_A 100 LEYLSGGELFMQL 112 (327)
T ss_dssp EECCTTEEHHHHH
T ss_pred EeCCCCCcHHHHH
Confidence 9999999998875
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.08 E-value=2.9e-10 Score=112.28 Aligned_cols=83 Identities=19% Similarity=0.364 Sum_probs=70.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+++. .+|+.||||.+........+.+.+|+.++..++||||+++++++...+. .++||||+++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~ 91 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTH--YYLVMQLVSGG 91 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEECCCCSC
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCE--EEEEEEcCCCc
Confidence 67899999999999997 5799999999976544455779999999999999999999999987766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 92 ~L~~~l 97 (304)
T 2jam_A 92 ELFDRI 97 (304)
T ss_dssp BHHHHH
T ss_pred cHHHHH
Confidence 998765
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=1.5e-10 Score=114.00 Aligned_cols=83 Identities=19% Similarity=0.402 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|..+|+|.+........+.+.+|+.++..++||||+++++++...+. .++||||+++|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~ 101 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGK--LWIMIEFCPGG 101 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-C--EEEEEECCTTE
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCe--EEEEEEeCCCC
Confidence 67899999999999998 5689999999976655567889999999999999999999999998777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 102 ~l~~~~ 107 (302)
T 2j7t_A 102 AVDAIM 107 (302)
T ss_dssp EHHHHH
T ss_pred cHHHHH
Confidence 998764
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.08 E-value=3.3e-10 Score=110.76 Aligned_cols=83 Identities=17% Similarity=0.252 Sum_probs=73.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+++. .++..+|+|.+.... ....+.+.+|+.++++++||||+++++++..... .++||||+++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~~~ 104 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHN--MYIVMETCEG 104 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEECCCSC
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCe--EEEEEEeCCC
Confidence 67999999999999997 578999999986543 2346789999999999999999999999987766 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 105 ~~L~~~l 111 (285)
T 3is5_A 105 GELLERI 111 (285)
T ss_dssp CBHHHHH
T ss_pred CcHHHHH
Confidence 9998765
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=2.4e-10 Score=115.19 Aligned_cols=83 Identities=19% Similarity=0.354 Sum_probs=71.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+++. .+|+.||||.+.... ....+.+.+|+.++.++ +||||+++++++.+.+. .++||||
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~--~~lv~e~ 91 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR--LFFVIEY 91 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--EEEEECC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCE--EEEEEeC
Confidence 67899999999999998 578999999996532 23356688999999987 89999999999988776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 92 ~~gg~L~~~l 101 (345)
T 3a8x_A 92 VNGGDLMFHM 101 (345)
T ss_dssp CCSCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999998775
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.5e-10 Score=117.35 Aligned_cols=82 Identities=21% Similarity=0.380 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+++. .+++.||||.+..... ..+.+.+|+.+++.++||||+++++++...+. .++||||+++|
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~lv~e~~~~~ 101 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTH--LAIIMEYASGG 101 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEEECCCSC
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCE--EEEEEEeCCCC
Confidence 67899999999999997 5899999999965433 34678899999999999999999999998776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 102 ~L~~~l 107 (361)
T 3uc3_A 102 ELYERI 107 (361)
T ss_dssp BHHHHH
T ss_pred CHHHHH
Confidence 998875
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.3e-10 Score=117.39 Aligned_cols=81 Identities=23% Similarity=0.397 Sum_probs=65.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+++.||||.+.... ..+.+.+|+.++.+++||||+++++++...+. .++||||+++|
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~~~~~ 133 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTE--ISLVLELVTGG 133 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSE--EEEEECCCCSC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCe--EEEEEEeCCCC
Confidence 67899999999999998 468899999997543 34678899999999999999999999988766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 134 ~L~~~l 139 (349)
T 2w4o_A 134 ELFDRI 139 (349)
T ss_dssp BHHHHH
T ss_pred CHHHHH
Confidence 998876
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.5e-10 Score=118.26 Aligned_cols=83 Identities=20% Similarity=0.394 Sum_probs=72.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+++. .+++.||+|.+.... ....+.+.+|+.++..++|||||++++++.+.+. .++||||+
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~--~~lv~e~~ 97 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEED--MFMVVDLL 97 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE--EEEEEecC
Confidence 67999999999999997 578999999986432 2235778999999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 98 ~gg~L~~~l 106 (384)
T 4fr4_A 98 LGGDLRYHL 106 (384)
T ss_dssp TTEEHHHHH
T ss_pred CCCcHHHHH
Confidence 999998875
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=1.4e-10 Score=115.68 Aligned_cols=83 Identities=23% Similarity=0.250 Sum_probs=69.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC--ceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE--QERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~--~~~~lv~e~~~~ 547 (555)
.++||+|+||.||+|++ .++.||||++..... ....+..|+.++++++||||+++++++..... ...++||||+++
T Consensus 29 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEECSTTCEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hheecccCceEEEEEEE-CCCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 77999999999999998 488999999965432 34556779999999999999999999976432 236999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 107 g~L~~~l 113 (322)
T 3soc_A 107 GSLSDFL 113 (322)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 9999876
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=3.7e-10 Score=109.08 Aligned_cols=82 Identities=17% Similarity=0.306 Sum_probs=73.3
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|+..++..||+|.+..... ..+.+.+|+.++.+++||||+++++++...+. .++||||+++|+
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~~ 89 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP--ICLVTEFMEHGC 89 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS--CEEEECCCTTCB
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC--eEEEEeCCCCCc
Confidence 678999999999999987888999999976433 35789999999999999999999999988776 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 90 L~~~~ 94 (267)
T 3t9t_A 90 LSDYL 94 (267)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99876
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.7e-10 Score=113.57 Aligned_cols=85 Identities=16% Similarity=0.229 Sum_probs=67.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh--------------------------cHHHHHHHHHHHHcCCCCc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR--------------------------HKKEFAKEVKKIGSMRHPN 522 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~--------------------------~~~~~~~ei~~l~~l~H~n 522 (555)
.+.||+|+||.||+|+. .+|+.||||.+...... ..+.+.+|+.++++++|||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 97 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN 97 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence 67899999999999997 57899999998543211 1356899999999999999
Q ss_pred ceeeeEEEEcCCCceEEEEEeccCCCChhhhh
Q 048796 523 IVPLRAYYWGPREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 523 iv~l~g~~~~~~~~~~~lv~e~~~~GsL~~~l 554 (555)
|+++++++........++||||+++|+|.+++
T Consensus 98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 129 (298)
T 2zv2_A 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP 129 (298)
T ss_dssp BCCEEEEEECSSSSEEEEEEECCTTCBSCCSS
T ss_pred CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh
Confidence 99999999864333489999999999987653
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=2.5e-10 Score=113.11 Aligned_cols=83 Identities=23% Similarity=0.318 Sum_probs=72.0
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .++..||||.+.... ....+.+.+|+.+++.++||||+++++++...+. .++||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~ 105 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP--LLLIV 105 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS--CEEEE
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc--eEEEE
Confidence 67899999999999985 245789999997543 3345789999999999999999999999987777 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 106 e~~~~~~L~~~l 117 (314)
T 2ivs_A 106 EYAKYGSLRGFL 117 (314)
T ss_dssp ECCTTCBHHHHH
T ss_pred eecCCCCHHHHH
Confidence 999999999876
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.06 E-value=2e-10 Score=116.87 Aligned_cols=83 Identities=24% Similarity=0.301 Sum_probs=71.7
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|++ .++..||||++... .......+.+|+.++.+++||||+++++++..... .++||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~--~~lv~ 153 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP--RFILL 153 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CEEEE
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC--CEEEE
Confidence 67899999999999995 24678999999654 33446679999999999999999999999988777 89999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 154 e~~~~g~L~~~l 165 (367)
T 3l9p_A 154 ELMAGGDLKSFL 165 (367)
T ss_dssp ECCTTEEHHHHH
T ss_pred EeCCCCCHHHHH
Confidence 999999999876
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.05 E-value=2e-10 Score=116.07 Aligned_cols=83 Identities=22% Similarity=0.432 Sum_probs=71.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|+. .+|+.||||.++... ....+.+.+|..++..+ +||||+++++++...+. .|+||||
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~--~~lv~E~ 105 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR--LFFVMEF 105 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--EEEEEEC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE--EEEEEeC
Confidence 67899999999999997 578999999996532 22356688999999988 79999999999988776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 106 ~~gg~L~~~l 115 (353)
T 3txo_A 106 VNGGDLMFHI 115 (353)
T ss_dssp CCSCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999998875
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=4.6e-10 Score=110.18 Aligned_cols=83 Identities=12% Similarity=0.215 Sum_probs=72.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+++.+|+|.+... .....+.+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~ 97 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDF--VFVVLELC 97 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCE--EEEEEecC
Confidence 67999999999999998 56889999998543 22345778999999999999999999999987766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 98 ~~~~L~~~~ 106 (294)
T 2rku_A 98 RRRSLLELH 106 (294)
T ss_dssp TTCBHHHHH
T ss_pred CCCCHHHHH
Confidence 999998764
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.4e-10 Score=119.66 Aligned_cols=83 Identities=17% Similarity=0.209 Sum_probs=71.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+++. .+|+.||||+++.... ...+.+.+|+.++..++||||+++++++.+.+. .|+|||||
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~--~~lVmE~~ 143 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENY--LYLVMEYY 143 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCE--EEEEEcCC
Confidence 67899999999999998 5799999999964321 123458899999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 144 ~gg~L~~~l 152 (412)
T 2vd5_A 144 VGGDLLTLL 152 (412)
T ss_dssp CSCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999999886
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.05 E-value=5.3e-10 Score=111.33 Aligned_cols=83 Identities=20% Similarity=0.342 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++..++||||+++++++...+. .++||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~ 94 (321)
T 2a2a_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD--VVLIL 94 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEE
T ss_pred eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE--EEEEE
Confidence 67899999999999997 5799999999864322 136789999999999999999999999987766 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 95 e~~~~~~L~~~l 106 (321)
T 2a2a_A 95 ELVSGGELFDFL 106 (321)
T ss_dssp CCCCSCBHHHHH
T ss_pred EcCCCCcHHHHH
Confidence 999999999876
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=6.4e-10 Score=110.61 Aligned_cols=85 Identities=20% Similarity=0.314 Sum_probs=72.1
Q ss_pred CCeeecCCceEEEEEEe-----CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-----DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||++.+ .+|+.||||++.... ....+.|.+|+.++++++||||+++++++...+....++|||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 115 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEEC
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEe
Confidence 67899999999999875 268899999997543 344677999999999999999999999998754334899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 116 ~~~~~~L~~~l 126 (318)
T 3lxp_A 116 YVPLGSLRDYL 126 (318)
T ss_dssp CCTTCBHHHHG
T ss_pred cccCCcHHHHH
Confidence 99999999876
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.04 E-value=6.7e-10 Score=108.25 Aligned_cols=83 Identities=23% Similarity=0.430 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+++. .+|+.||||.+..... ...+.|.+|+.++.+++||||+++++++...+. .++||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~ 87 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD--VVLIL 87 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEE
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe--EEEEE
Confidence 67899999999999998 4799999999854321 136789999999999999999999999987766 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 88 e~~~~~~L~~~l 99 (283)
T 3bhy_A 88 ELVSGGELFDFL 99 (283)
T ss_dssp ECCCSCBHHHHH
T ss_pred eecCCCcHHHHH
Confidence 999999998875
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=3.4e-10 Score=112.63 Aligned_cols=82 Identities=20% Similarity=0.307 Sum_probs=62.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++++++||||+++++++...+. .++||||++
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~~- 86 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENK--LTLVFEFMD- 86 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTE--EEEEEECCC-
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCe--EEEEEEecC-
Confidence 77899999999999997 5799999999965432 235778999999999999999999999987766 999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 87 ~~L~~~l 93 (317)
T 2pmi_A 87 NDLKKYM 93 (317)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 5888765
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.04 E-value=1.6e-10 Score=116.60 Aligned_cols=163 Identities=14% Similarity=0.225 Sum_probs=98.0
Q ss_pred ccccCCCCccEEEeeCCc-CCCCCchhccCCCCccEEEcCCCcCCCCCchhhh--CCCCCCeEEccC--CcccccCCcCc
Q 048796 71 NLTSQFDRLSTFNIRNNS-VTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFF--SSMALTNLNLSG--NGFSGAIPLRS 145 (555)
Q Consensus 71 ~~~~~l~~L~~L~L~~N~-l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~--~~~~L~~L~Ls~--N~l~~~~p~~~ 145 (555)
..+..+++|+.|+|++|. +. ++. +. +++|+.|+|..|.+.......+. .+++|+.|+|+. |...+.. .+
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l~--l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~--~~ 239 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNLS--IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG--DM 239 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTCB--CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS--CG
T ss_pred HHHhcCCCCcEEEEeCCCCce--ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch--hH
Confidence 445566777778777763 22 222 32 67788888877776533333343 577888887753 2221110 01
Q ss_pred cccccccccCCCCCcCEEEccCCcCCCcCCcccc---CccccceeecccccccCCCc----hhccCCCCCCEEeCCCCcC
Q 048796 146 SHASELLVLPSYPPMESLDLSGNALTGVLPSDIG---NMGRLRLLNLANNHLSGKMP----SELSKLGALEYLDLSGNQF 218 (555)
Q Consensus 146 ~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l 218 (555)
..+..+.....+++|++|+|.+|.+++..+..+. .+++|+.|+|+.|.|++..+ ..+..+++|+.|+|++|.|
T Consensus 240 ~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 240 NVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp GGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBC
T ss_pred HHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcC
Confidence 1111111112358899999999888754333332 57889999999999876432 2334568899999999988
Q ss_pred CCCCChhhhc-CCCEEEeccCC
Q 048796 219 KGEIPDKLSL-KLNEFNVSYND 239 (555)
Q Consensus 219 ~~~~p~~~~~-~L~~L~ls~N~ 239 (555)
+...-..+.. -...++++.|+
T Consensus 320 ~d~~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 320 SDEMKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp CHHHHHHHHHHCCSEEECCSBC
T ss_pred CHHHHHHHHHHcCCEEEecCCc
Confidence 8544444442 23667888776
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.04 E-value=2.9e-10 Score=112.84 Aligned_cols=85 Identities=21% Similarity=0.298 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC--CCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP--REQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~--~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+++. .+|+.||||.+........+.+.+|+.+++.++||||+++++++... .....++|+||++
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~ 113 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFK 113 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCC
Confidence 77999999999999997 68999999998766556678899999999999999999999998631 2224899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 114 ~~~L~~~l 121 (317)
T 2buj_A 114 RGTLWNEI 121 (317)
T ss_dssp TCBHHHHH
T ss_pred CCcHHHHH
Confidence 99998875
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.04 E-value=2.2e-10 Score=110.91 Aligned_cols=82 Identities=26% Similarity=0.412 Sum_probs=68.0
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh----hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV----RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~----~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .|..+|||.+..... ...+.+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 12 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~ 88 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN--LCLVMEFA 88 (271)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC----CEEEEECC
T ss_pred eeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc--eEEEEEcC
Confidence 67999999999999998 588999999864322 235779999999999999999999999988776 89999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 89 ~~~~L~~~~ 97 (271)
T 3dtc_A 89 RGGPLNRVL 97 (271)
T ss_dssp TTEEHHHHH
T ss_pred CCCCHHHHh
Confidence 999998875
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.6e-10 Score=116.97 Aligned_cols=84 Identities=21% Similarity=0.339 Sum_probs=70.8
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|++ .+++.||||+++.... ...+.|.+|+.++.++ +||||++++++|...+. ..++|
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~-~~~iv 105 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVI 105 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS-CCEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC-ceEEE
Confidence 67899999999999983 3568899999976433 3356799999999999 79999999999976442 38999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 106 ~e~~~~g~L~~~l 118 (359)
T 3vhe_A 106 VEFCKFGNLSTYL 118 (359)
T ss_dssp EECCTTEEHHHHH
T ss_pred EEecCCCcHHHHH
Confidence 9999999999886
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.04 E-value=2.7e-10 Score=115.03 Aligned_cols=83 Identities=19% Similarity=0.336 Sum_probs=72.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+|+.||||.+.... ....+.+.+|+.++..++||||+++++++.+.+. .++||||+
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~ 123 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYV 123 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE--EEEEEcCC
Confidence 67899999999999997 579999999986432 1235678999999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 124 ~gg~L~~~l 132 (350)
T 1rdq_E 124 AGGEMFSHL 132 (350)
T ss_dssp TTCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999998876
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=3.2e-10 Score=110.30 Aligned_cols=85 Identities=25% Similarity=0.336 Sum_probs=72.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+++. .+|+.||+|.+.... ....+.+.+|+.++++++||||+++++++........++||||++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 90 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCT
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCC
Confidence 67899999999999997 579999999996532 334677999999999999999999999886433334899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 91 ~~~L~~~l 98 (279)
T 2w5a_A 91 GGDLASVI 98 (279)
T ss_dssp TEEHHHHH
T ss_pred CCCHHHHH
Confidence 99998876
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=5.9e-10 Score=108.69 Aligned_cols=83 Identities=20% Similarity=0.318 Sum_probs=72.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+++.||||.+.... .....++.+|+..+..+ +||||+++++++...+. .++||||+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~--~~lv~e~~ 93 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDH--MLIQNEYC 93 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTE--EEEEEECC
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCe--EEEEEEec
Confidence 67899999999999998 579999999986532 23467789999999998 99999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 94 ~~~~L~~~l 102 (289)
T 1x8b_A 94 NGGSLADAI 102 (289)
T ss_dssp TTCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999999876
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.03 E-value=3.8e-10 Score=117.56 Aligned_cols=83 Identities=19% Similarity=0.311 Sum_probs=70.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|.. .+|+.+|+|.+.... ....+.+.+|+.+++.++||||+++++++.+.+. .++||||++
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~--~~lv~E~~~ 93 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGH--HYLIFDLVT 93 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSE--EEEEECCCB
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCE--EEEEEEeCC
Confidence 67899999999999987 679999999996543 2345679999999999999999999999988776 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+.+
T Consensus 94 gg~L~~~i 101 (444)
T 3soa_A 94 GGELFEDI 101 (444)
T ss_dssp CCBHHHHH
T ss_pred CCCHHHHH
Confidence 99998765
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=2.1e-10 Score=115.49 Aligned_cols=83 Identities=17% Similarity=0.372 Sum_probs=71.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|+. .+|+.||||.++... ....+.+..|..++..+ +||||+++++++.+.+. .|+||||
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~--~~lv~E~ 99 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN--LFFVMEY 99 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE--EEEEEEC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE--EEEEEeC
Confidence 67999999999999998 578999999996532 22356678899988876 99999999999988776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 100 ~~gg~L~~~l 109 (345)
T 1xjd_A 100 LNGGDLMYHI 109 (345)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999998876
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.03 E-value=5.3e-10 Score=111.61 Aligned_cols=85 Identities=24% Similarity=0.432 Sum_probs=72.1
Q ss_pred CCeeecCCceEEEEEEe-----CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-----DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|++ .+|+.||||.+........+.|.+|+.++++++||||+++++++...+....++|+||
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 125 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 125 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECC
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEEC
Confidence 67899999999999984 4688999999987655567789999999999999999999999876543238999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 126 ~~~~~L~~~l 135 (326)
T 2w1i_A 126 LPYGSLRDYL 135 (326)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999999876
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.03 E-value=4.3e-10 Score=113.93 Aligned_cols=83 Identities=19% Similarity=0.352 Sum_probs=73.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+++. .+|..||+|.+.... ....+.+.+|+.++..++||||+++++++...+. .++||||+++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~ 115 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDG 115 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTE--EEEEECCCTT
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCE--EEEEEECCCC
Confidence 67899999999999998 579999999997543 3345789999999999999999999999988776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 116 ~~L~~~l 122 (360)
T 3eqc_A 116 GSLDQVL 122 (360)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 9999876
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.02 E-value=2.8e-10 Score=112.68 Aligned_cols=78 Identities=29% Similarity=0.466 Sum_probs=68.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|++ .++.||||.+.... ..+.|.+|+.++++++||||+++++++. +. .++||||+++|+
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~--~~lv~e~~~~~~ 85 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--NP--VCLVMEYAEGGS 85 (307)
T ss_dssp EEEEECCSSSEEEEEEE-TTEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TT--TEEEEECCTTCB
T ss_pred eeEeecCCCceEEEEEE-CCeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CC--cEEEEEcCCCCC
Confidence 67899999999999998 57889999986532 3578999999999999999999999876 34 799999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 86 L~~~l 90 (307)
T 2eva_A 86 LYNVL 90 (307)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99876
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.02 E-value=3.3e-10 Score=110.32 Aligned_cols=83 Identities=25% Similarity=0.413 Sum_probs=71.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .++..||||.+.... ....+.+.+|+.++++++||||+++++++...+. .++||||+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~ 91 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYA 91 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCE--EEEEEecC
Confidence 67899999999999997 568899999985432 1235678999999999999999999999987766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 92 ~~~~l~~~l 100 (279)
T 3fdn_A 92 PLGTVYREL 100 (279)
T ss_dssp TTEEHHHHH
T ss_pred CCCcHHHHH
Confidence 999998765
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=7.6e-10 Score=108.98 Aligned_cols=85 Identities=21% Similarity=0.296 Sum_probs=69.4
Q ss_pred CCeeecCCceEEEEEEe-----CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-----DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|++ .+++.||||.+..... ...+.+.+|+.++..++||||+++++++...+....++|||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 105 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEE
Confidence 67899999999999984 4688999999975432 34578999999999999999999999998763333899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 106 ~~~~~~L~~~l 116 (302)
T 4e5w_A 106 FLPSGSLKEYL 116 (302)
T ss_dssp CCTTCBHHHHH
T ss_pred eCCCCcHHHHH
Confidence 99999999876
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.02 E-value=2.7e-10 Score=116.77 Aligned_cols=83 Identities=19% Similarity=0.377 Sum_probs=69.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+++. .+++.||||+++.... ...+.+..|..++.++ +||||+++++++.+.+. .++||||
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~--~~lV~E~ 134 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR--LFFVIEY 134 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE--EEEEEEC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE--EEEEEEc
Confidence 67999999999999997 5788999999965322 2234578899998876 89999999999988776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 135 ~~gg~L~~~l 144 (396)
T 4dc2_A 135 VNGGDLMFHM 144 (396)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999998775
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=6.2e-10 Score=111.61 Aligned_cols=83 Identities=12% Similarity=0.215 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+++.+|+|.+... .....+.+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~ 123 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDF--VFVVLELC 123 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCe--EEEEEecC
Confidence 67899999999999997 56889999998643 22346779999999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 124 ~~~~L~~~~ 132 (335)
T 2owb_A 124 RRRSLLELH 132 (335)
T ss_dssp TTCBHHHHH
T ss_pred CCCCHHHHH
Confidence 999998765
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=5.2e-10 Score=109.09 Aligned_cols=83 Identities=20% Similarity=0.324 Sum_probs=71.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||+|.+... .....+.+.+|+.++++++||||+++++++...+. .++||||++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~~v~e~~~ 88 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESF--HYLVFDLVT 88 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEECCCC
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCE--EEEEEecCC
Confidence 67899999999999997 57899999998643 22345778999999999999999999999987766 899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 89 ~~~l~~~~ 96 (284)
T 3kk8_A 89 GGELFEDI 96 (284)
T ss_dssp SCBHHHHH
T ss_pred CCCHHHHH
Confidence 99997764
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.02 E-value=5.4e-10 Score=121.35 Aligned_cols=80 Identities=20% Similarity=0.303 Sum_probs=69.7
Q ss_pred eeecCCceEEEEEEeC---CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 472 VLGRSSHGTLYKATLD---SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 472 ~lG~G~~g~vy~~~~~---~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.||+|+||.||+|.+. ++..||||.++.... ...++|.+|+.+|++++|||||+++++|.. +. .++|||||++
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~--~~lv~E~~~~ 419 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EA--LMLVMEMAGG 419 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SS--EEEEEECCTT
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CC--eEEEEEeCCC
Confidence 6999999999999872 566799999976433 356889999999999999999999999975 45 8999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 420 g~L~~~l 426 (613)
T 2ozo_A 420 GPLHKFL 426 (613)
T ss_dssp CBHHHHH
T ss_pred CcHHHHH
Confidence 9999886
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=8.1e-10 Score=109.32 Aligned_cols=83 Identities=17% Similarity=0.325 Sum_probs=71.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+... .....+.+.+|+.++.+++||||+++++++...+. .++||||+
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~ 114 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNE--LNIVLELA 114 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE--EEEEEECC
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCc--EEEEEecC
Confidence 67899999999999997 67999999999653 23345779999999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 115 ~~~~L~~~l 123 (310)
T 2wqm_A 115 DAGDLSRMI 123 (310)
T ss_dssp CSCBHHHHH
T ss_pred CCCCHHHHH
Confidence 999998875
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.02 E-value=7.4e-10 Score=107.76 Aligned_cols=82 Identities=22% Similarity=0.329 Sum_probs=71.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|...++..||||.+.... ...+.|.+|+.++..++||||+++++++.. +. .++||||+++|+
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~--~~~v~e~~~~~~ 93 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP--IYIITEYMENGS 93 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS--CEEEEECCTTCB
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CC--cEEEEecCCCCC
Confidence 67899999999999998778899999996543 246789999999999999999999999864 44 899999999999
Q ss_pred hhhhhC
Q 048796 550 LALHLY 555 (555)
Q Consensus 550 L~~~l~ 555 (555)
|.+++.
T Consensus 94 L~~~l~ 99 (279)
T 1qpc_A 94 LVDFLK 99 (279)
T ss_dssp HHHHTT
T ss_pred HHHHHh
Confidence 998763
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=3.8e-10 Score=111.93 Aligned_cols=82 Identities=24% Similarity=0.391 Sum_probs=68.9
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+..+|+.||||++..... ...+.+.+|+.++++++||||+++++++...+. .++||||+++
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~~~ 103 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERC--LTLVFEFMEK 103 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSC--EEEEEECCSE
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCE--EEEEEcCCCC
Confidence 678999999999999998899999999965322 225678999999999999999999999987777 9999999985
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
+|.+++
T Consensus 104 -~l~~~~ 109 (311)
T 3niz_A 104 -DLKKVL 109 (311)
T ss_dssp -EHHHHH
T ss_pred -CHHHHH
Confidence 676654
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=5.4e-10 Score=118.34 Aligned_cols=83 Identities=19% Similarity=0.285 Sum_probs=68.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .++..+|||.+.... ......+.+|+.+++.++||||++++++|..... .++||||++
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~lv~e~~~ 119 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRN--YYLVMECYK 119 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEEECCC
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE--EEEEEecCC
Confidence 67899999999999997 578999999986542 2235779999999999999999999999998766 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 120 ~g~L~~~~ 127 (494)
T 3lij_A 120 GGELFDEI 127 (494)
T ss_dssp SCBHHHHH
T ss_pred CCcHHHHH
Confidence 99998765
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=3.6e-10 Score=111.91 Aligned_cols=83 Identities=24% Similarity=0.304 Sum_probs=72.3
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|+. .+++.||||.+..... ...+.+.+|+.++.++ +||||+++++++...+. .++|
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~--~~lv 105 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP--TLVI 105 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC--cEEE
Confidence 67899999999999984 3567899999975433 3467899999999999 99999999999988777 9999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 106 ~e~~~~~~L~~~l 118 (313)
T 1t46_A 106 TEYCCYGDLLNFL 118 (313)
T ss_dssp EECCTTEEHHHHH
T ss_pred EecCCCCCHHHHH
Confidence 9999999999876
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.01 E-value=2.6e-10 Score=111.53 Aligned_cols=82 Identities=22% Similarity=0.327 Sum_probs=72.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .++..||||.+..... ..+.+.+|+.++++++||||+++++++...+. .++||||+++|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~~v~e~~~~~ 94 (288)
T 3kfa_A 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYG 94 (288)
T ss_dssp EEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST-HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--EEEEEECCTTE
T ss_pred EeecCCCCceeEEEeEecCCCEEEEEEecCcCHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC--EEEEEEcCCCC
Confidence 67899999999999998 4688999999975432 45789999999999999999999999987777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 95 ~L~~~~ 100 (288)
T 3kfa_A 95 NLLDYL 100 (288)
T ss_dssp EHHHHH
T ss_pred cHHHHH
Confidence 998876
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.01 E-value=7.4e-10 Score=117.60 Aligned_cols=83 Identities=18% Similarity=0.325 Sum_probs=69.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-------------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-------------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE 535 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-------------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~ 535 (555)
.+.||+|+||.||+|+. .++..+|||.+..... ...+.+.+|+.++++++||||++++++|.....
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 120 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY 120 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 67899999999999997 5788999999864321 235679999999999999999999999998776
Q ss_pred ceEEEEEeccCCCChhhhh
Q 048796 536 QERLLLADYIQGDSLALHL 554 (555)
Q Consensus 536 ~~~~lv~e~~~~GsL~~~l 554 (555)
.++|||||++|+|.+++
T Consensus 121 --~~lv~e~~~gg~L~~~l 137 (504)
T 3q5i_A 121 --FYLVTEFYEGGELFEQI 137 (504)
T ss_dssp --EEEEEECCTTCBHHHHH
T ss_pred --EEEEEecCCCCcHHHHH
Confidence 99999999999998765
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.01 E-value=3.9e-10 Score=113.00 Aligned_cols=83 Identities=18% Similarity=0.266 Sum_probs=70.6
Q ss_pred CCeeecCCceEEEEEEe--------CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEE
Q 048796 470 AEVLGRSSHGTLYKATL--------DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--------~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 539 (555)
.+.||+|+||.||+|+. .++..||||.+.... ....+.+.+|+.++.++ +||||++++++|...+. .+
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~--~~ 117 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP--LY 117 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSC--CE
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCc--eE
Confidence 67899999999999986 246789999997543 33457799999999999 89999999999987776 99
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+||||+++|+|.+++
T Consensus 118 lv~e~~~~~~L~~~l 132 (334)
T 2pvf_A 118 VIVEYASKGNLREYL 132 (334)
T ss_dssp EEEECCTTCBHHHHH
T ss_pred EEEECCCCCcHHHHH
Confidence 999999999999876
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=5.3e-10 Score=110.27 Aligned_cols=83 Identities=16% Similarity=0.314 Sum_probs=73.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+.+++.++||||+++++++...+. .++||||+++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~ 104 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK--LWIIMEYLGG 104 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECCTT
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCe--EEEEEEeCCC
Confidence 67899999999999987 578999999996543 2346789999999999999999999999987766 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 105 ~~L~~~~ 111 (303)
T 3a7i_A 105 GSALDLL 111 (303)
T ss_dssp EEHHHHH
T ss_pred CcHHHHH
Confidence 9998876
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.6e-10 Score=114.60 Aligned_cols=85 Identities=21% Similarity=0.273 Sum_probs=71.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCc--eEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ--ERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~--~~~lv~e 543 (555)
.+.||+|+||.||+++. .+++.||||.+..... ...+.|.+|+.++.+++||||+++++++...... ..++|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e 96 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEe
Confidence 67899999999999997 6789999999975432 2346789999999999999999999998754431 1499999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 97 ~~~g~~L~~~l 107 (311)
T 3ork_A 97 YVDGVTLRDIV 107 (311)
T ss_dssp CCCEEEHHHHH
T ss_pred cCCCCCHHHHH
Confidence 99999999876
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.00 E-value=4.9e-10 Score=111.50 Aligned_cols=83 Identities=18% Similarity=0.279 Sum_probs=71.8
Q ss_pred CCeeecCCceEEEEEEeC------CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|+.. +++.||||.+..... .....|.+|+.+++.++||||+++++++...+. .++||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~ 107 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP--TLVIM 107 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS--CEEEE
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCc--cEEEE
Confidence 678999999999999863 367899999975432 345679999999999999999999999987776 89999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 108 e~~~~~~L~~~l 119 (322)
T 1p4o_A 108 ELMTRGDLKSYL 119 (322)
T ss_dssp ECCTTCBHHHHH
T ss_pred EeCCCCcHHHHH
Confidence 999999999876
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.00 E-value=7.6e-10 Score=107.42 Aligned_cols=83 Identities=19% Similarity=0.229 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+.+++.++||||+++++++...+. .++|+||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~ 89 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI--QYLFLEYCSG 89 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE--EEEEEECCTT
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCE--EEEEEEecCC
Confidence 67899999999999997 579999999986432 2345789999999999999999999999987766 8999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 90 ~~L~~~l 96 (276)
T 2yex_A 90 GELFDRI 96 (276)
T ss_dssp EEGGGGS
T ss_pred CcHHHHH
Confidence 9998876
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.00 E-value=3.7e-10 Score=109.89 Aligned_cols=83 Identities=20% Similarity=0.354 Sum_probs=72.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++.+++||||+++++++...+. .++|+||+
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~ 93 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNY--VYLVLEMC 93 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCe--EEEEEecC
Confidence 67899999999999997 6799999999864321 224779999999999999999999999988766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 94 ~~~~L~~~l 102 (278)
T 3cok_A 94 HNGEMNRYL 102 (278)
T ss_dssp TTEEHHHHH
T ss_pred CCCcHHHHH
Confidence 999998875
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=5.7e-10 Score=119.14 Aligned_cols=83 Identities=19% Similarity=0.272 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+|+. .+|+.||||.+.... ......+.+|+.++..++|||||++++++.+.+. .++|||||
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~--l~lVmEy~ 266 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDA--LCLVLTLM 266 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCE--EEEEEEcC
Confidence 57899999999999997 579999999996432 2235678999999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 267 ~gg~L~~~l 275 (576)
T 2acx_A 267 NGGDLKFHI 275 (576)
T ss_dssp CSCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999998876
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.00 E-value=4.5e-10 Score=112.93 Aligned_cols=83 Identities=24% Similarity=0.267 Sum_probs=69.9
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|+. .++..||||.+.... ....+.+.+|+.++.++ +||||+++++++...+. .++|
T Consensus 50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~--~~lv 127 (344)
T 1rjb_A 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP--IYLI 127 (344)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CEEE
T ss_pred eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc--cEEE
Confidence 67999999999999985 245689999997542 23457899999999999 89999999999988777 9999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 128 ~e~~~~g~L~~~l 140 (344)
T 1rjb_A 128 FEYCCYGDLLNYL 140 (344)
T ss_dssp EECCTTCBHHHHH
T ss_pred EecCCCCcHHHHH
Confidence 9999999999876
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=6.2e-10 Score=108.10 Aligned_cols=83 Identities=22% Similarity=0.389 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~ 93 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTD--FFMVMEYV 93 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCe--EEEEEecc
Confidence 67899999999999998 479999999986432 1235678999999999999999999999987766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 94 ~~~~L~~~l 102 (276)
T 2h6d_A 94 SGGELFDYI 102 (276)
T ss_dssp CSCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999998875
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=98.99 E-value=5.5e-10 Score=109.38 Aligned_cols=82 Identities=22% Similarity=0.328 Sum_probs=70.7
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+..+|+.||||++..... ...+.+.+|+.++++++||||+++++++...+. .++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~ 84 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKR--LVLVFEHLDQ 84 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSC--EEEEEECCSE
T ss_pred hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCe--EEEEEEecCC
Confidence 568999999999999987899999999965432 234778999999999999999999999998777 9999999986
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
+|.+++
T Consensus 85 -~l~~~~ 90 (288)
T 1ob3_A 85 -DLKKLL 90 (288)
T ss_dssp -EHHHHH
T ss_pred -CHHHHH
Confidence 777654
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.99 E-value=4.7e-10 Score=117.78 Aligned_cols=83 Identities=22% Similarity=0.399 Sum_probs=72.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~--~~lv~E~~ 98 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSD--IFMVMEYV 98 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE--EEEEEeCC
Confidence 67899999999999997 5899999999964322 235678999999999999999999999988766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 99 ~gg~L~~~l 107 (476)
T 2y94_A 99 SGGELFDYI 107 (476)
T ss_dssp SSEEHHHHT
T ss_pred CCCcHHHHH
Confidence 999999876
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.99 E-value=6.9e-10 Score=113.43 Aligned_cols=83 Identities=18% Similarity=0.261 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe--------CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEE
Q 048796 470 AEVLGRSSHGTLYKATL--------DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--------~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 539 (555)
.+.||+|+||.||+|+. ..+..||||++.... ....+.+.+|+.++.++ +||||++++++|...+. .+
T Consensus 74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~--~~ 151 (382)
T 3tt0_A 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP--LY 151 (382)
T ss_dssp EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CE
T ss_pred eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCc--eE
Confidence 67899999999999985 123579999996543 33457899999999999 99999999999988777 99
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+||||+++|+|.+++
T Consensus 152 lv~e~~~~g~L~~~l 166 (382)
T 3tt0_A 152 VIVEYASKGNLREYL 166 (382)
T ss_dssp EEEECCTTCBHHHHH
T ss_pred EEEEecCCCcHHHHH
Confidence 999999999999876
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=6.3e-10 Score=109.32 Aligned_cols=83 Identities=24% Similarity=0.284 Sum_probs=71.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---------hhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---------VRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQER 538 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---------~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~ 538 (555)
.+.||+|+||.||+|+. .+|+.||||.++... ....+.+.+|+.++.++. ||||+++++++...+. .
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~--~ 99 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF--F 99 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE--E
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCe--E
Confidence 67899999999999998 578999999986432 122467889999999996 9999999999987766 9
Q ss_pred EEEEeccCCCChhhhh
Q 048796 539 LLLADYIQGDSLALHL 554 (555)
Q Consensus 539 ~lv~e~~~~GsL~~~l 554 (555)
++||||+++|+|.+++
T Consensus 100 ~lv~e~~~~~~L~~~l 115 (298)
T 1phk_A 100 FLVFDLMKKGELFDYL 115 (298)
T ss_dssp EEEEECCTTCBHHHHH
T ss_pred EEEEeccCCCcHHHHH
Confidence 9999999999999876
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=98.99 E-value=9.1e-10 Score=107.82 Aligned_cols=85 Identities=20% Similarity=0.284 Sum_probs=70.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC--CCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP--REQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~--~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|.. .++..||+|.+... .....+.+.+|+.+++.++||||+++++++... +....++||||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 110 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEe
Confidence 56899999999999997 67889999998643 233467799999999999999999999998642 22238999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 111 ~~~~~L~~~l 120 (290)
T 1t4h_A 111 MTSGTLKTYL 120 (290)
T ss_dssp CCSCBHHHHH
T ss_pred cCCCCHHHHH
Confidence 9999998876
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.99 E-value=5.7e-10 Score=110.43 Aligned_cols=83 Identities=23% Similarity=0.329 Sum_probs=71.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+.++.+++||||+++++++...+. .++||||++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~ 85 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRR--LHLVFEYCD 85 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECCS
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCe--EEEEEEeCC
Confidence 57899999999999998 5699999999855332 235678899999999999999999999988776 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 86 ~~~l~~~~ 93 (311)
T 4agu_A 86 HTVLHELD 93 (311)
T ss_dssp EEHHHHHH
T ss_pred CchHHHHH
Confidence 99887654
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=7.4e-10 Score=120.65 Aligned_cols=81 Identities=21% Similarity=0.236 Sum_probs=69.3
Q ss_pred CeeecCCceEEEEEEe---CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL---DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~---~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
+.||+|+||.||+|.+ ..++.||||+++.... ...++|.+|+.+|.+++|||||+++++|.. +. .++|||||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~--~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ES--WMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SS--EEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CC--EEEEEEcc
Confidence 4799999999999976 3567899999975432 336789999999999999999999999974 44 89999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 452 ~~g~L~~~l 460 (635)
T 4fl3_A 452 ELGPLNKYL 460 (635)
T ss_dssp TTEEHHHHH
T ss_pred CCCCHHHHH
Confidence 999999876
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=9.5e-10 Score=116.12 Aligned_cols=83 Identities=23% Similarity=0.330 Sum_probs=73.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.++++++||||+++++++...+. .++|+||+
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~lv~e~~ 108 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGY--FYLVGEVY 108 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE--EEEEEecC
Confidence 67899999999999997 589999999985432 2346789999999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 109 ~~~~L~~~~ 117 (484)
T 3nyv_A 109 TGGELFDEI 117 (484)
T ss_dssp CSCBHHHHH
T ss_pred CCCCHHHHH
Confidence 999998765
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=98.98 E-value=5.8e-10 Score=108.90 Aligned_cols=83 Identities=20% Similarity=0.398 Sum_probs=71.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .++..||||.+.... ....+.+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~ 96 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKR--IYLMLEFA 96 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCE--EEEEEEeC
Confidence 67899999999999997 568899999985432 1235679999999999999999999999987766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 97 ~~~~L~~~l 105 (284)
T 2vgo_A 97 PRGELYKEL 105 (284)
T ss_dssp TTEEHHHHH
T ss_pred CCCcHHHHH
Confidence 999998875
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.98 E-value=6.1e-10 Score=110.28 Aligned_cols=83 Identities=20% Similarity=0.363 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+++.||||.+..... ...+.+.+|+.++.+++||||+++++++...+. .++|+||+
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~ 116 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQ--LYVDMRLI 116 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE--EEEEEECC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCe--EEEEEEec
Confidence 67899999999999997 5788999999965432 224779999999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 117 ~~~~L~~~l 125 (309)
T 2h34_A 117 NGVDLAAML 125 (309)
T ss_dssp CCEEHHHHH
T ss_pred CCCCHHHHH
Confidence 999999875
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=4.3e-10 Score=112.27 Aligned_cols=83 Identities=24% Similarity=0.303 Sum_probs=69.4
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|++ .++..||||.+... .......+.+|+.++++++||||+++++++...+. .++||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~ 112 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP--RFILM 112 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CEEEE
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC--cEEEE
Confidence 67899999999999984 35778999999643 33446789999999999999999999999988777 89999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 113 e~~~~~~L~~~l 124 (327)
T 2yfx_A 113 ELMAGGDLKSFL 124 (327)
T ss_dssp ECCTTEEHHHHH
T ss_pred ecCCCCcHHHHH
Confidence 999999999876
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=98.98 E-value=1.4e-09 Score=106.42 Aligned_cols=81 Identities=20% Similarity=0.292 Sum_probs=69.5
Q ss_pred CeeecCCceEEEEEEe---CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 471 EVLGRSSHGTLYKATL---DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~---~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
..||+|+||.||+|++ .++..||||.++... ....+.+.+|+.++.+++||||+++++++.. +. .++||||++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~--~~lv~e~~~ 92 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EA--LMLVMEMAG 92 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SS--EEEEEECCT
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-CC--cEEEEEeCC
Confidence 4899999999999986 367889999997643 3446789999999999999999999999953 44 899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 93 ~~~L~~~l 100 (287)
T 1u59_A 93 GGPLHKFL 100 (287)
T ss_dssp TEEHHHHH
T ss_pred CCCHHHHH
Confidence 99999876
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=2.3e-10 Score=119.52 Aligned_cols=83 Identities=19% Similarity=0.337 Sum_probs=63.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+|+. .+|+.||||.+... .......+.+|+.+++.++||||++++++|...+. .++|||||
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~--~~lv~e~~ 230 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDR--LCFVMEYA 230 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTE--EEEEECCC
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCE--EEEEEeeC
Confidence 67999999999999997 67999999999643 22234668899999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 231 ~~~~L~~~l 239 (446)
T 4ejn_A 231 NGGELFFHL 239 (446)
T ss_dssp SSCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999998765
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=8.7e-10 Score=111.17 Aligned_cols=82 Identities=23% Similarity=0.362 Sum_probs=69.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||++..... ...+.|.+|+.++++++||||+++++++...+. .++||||+
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~lv~e~~ 136 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT--AWLVMEYC 136 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECC
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCe--EEEEEecC
Confidence 56899999999999996 6899999999965332 234678999999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+ |+|.+++
T Consensus 137 ~-g~l~~~l 144 (348)
T 1u5q_A 137 L-GSASDLL 144 (348)
T ss_dssp S-EEHHHHH
T ss_pred C-CCHHHHH
Confidence 8 5776654
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.98 E-value=3.9e-10 Score=113.11 Aligned_cols=82 Identities=23% Similarity=0.402 Sum_probs=70.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~--~~lv~E~~ 91 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTD--IVMVIEYA 91 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE--EEEEEECC
Confidence 67899999999999997 6899999999864321 224678999999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+|+|.+++
T Consensus 92 -~g~l~~~l 99 (336)
T 3h4j_B 92 -GGELFDYI 99 (336)
T ss_dssp -CEEHHHHH
T ss_pred -CCcHHHHH
Confidence 67888765
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=98.98 E-value=6e-10 Score=115.34 Aligned_cols=82 Identities=12% Similarity=0.300 Sum_probs=67.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~l 540 (555)
.+.||+|+||.||+|.. .+++.||||.+..... .....+.+|+.++++++||||+++++++.. +. .++
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~--~~l 216 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-ED--YYI 216 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SE--EEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-Cc--eEE
Confidence 56899999999999997 6789999999864321 112358899999999999999999999864 33 899
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
|||||++|+|.+++
T Consensus 217 v~e~~~~g~L~~~l 230 (419)
T 3i6u_A 217 VLELMEGGELFDKV 230 (419)
T ss_dssp EEECCTTCBGGGGT
T ss_pred EEEcCCCCcHHHHH
Confidence 99999999998876
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.97 E-value=6.2e-10 Score=110.82 Aligned_cols=85 Identities=20% Similarity=0.373 Sum_probs=66.1
Q ss_pred CCeeecCCceEEEEEEeC-CC---CEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCc----eEE
Q 048796 470 AEVLGRSSHGTLYKATLD-SG---HMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ----ERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g---~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~----~~~ 539 (555)
.+.||+|+||.||+|+.. ++ ..||||.++.. .....+.|.+|+.++++++||||+++++++...... ..+
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 107 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPM 107 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccE
Confidence 679999999999999973 33 37999999654 233467899999999999999999999999876541 128
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+|+||+++|+|.+++
T Consensus 108 ~v~e~~~~~~L~~~l 122 (323)
T 3qup_A 108 VILPFMKHGDLHAFL 122 (323)
T ss_dssp EEEECCTTCBHHHHH
T ss_pred EEEEeccCCcHHHHH
Confidence 999999999998875
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=6.9e-10 Score=111.00 Aligned_cols=83 Identities=25% Similarity=0.321 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe-CCC-----CEEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSG-----HMLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g-----~~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|.. ..+ ..||||.+.... ....+.+.+|+.++..+ +||||++++++|...+. .++|
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~--~~lv 128 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP--VLVI 128 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc--eEEE
Confidence 67899999999999996 233 479999997543 33467799999999999 89999999999988777 9999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 129 ~e~~~~g~L~~~l 141 (333)
T 2i1m_A 129 TEYCCYGDLLNFL 141 (333)
T ss_dssp EECCTTEEHHHHH
T ss_pred EecCCCCcHHHHH
Confidence 9999999999876
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=9.1e-10 Score=116.35 Aligned_cols=83 Identities=19% Similarity=0.272 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.++++++||||+++++++..... .++|+||++
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~lv~e~~~ 104 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSS--FYIVGELYT 104 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEECCCC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCE--EEEEEEcCC
Confidence 67899999999999997 579999999985422 2346789999999999999999999999998776 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 105 ~~~L~~~~ 112 (486)
T 3mwu_A 105 GGELFDEI 112 (486)
T ss_dssp SCBHHHHH
T ss_pred CCcHHHHH
Confidence 99998765
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=98.97 E-value=9e-10 Score=117.16 Aligned_cols=83 Identities=19% Similarity=0.309 Sum_probs=72.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++.+++||||+++++++...+. .|+||||+
T Consensus 190 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~--l~lVmE~~ 267 (543)
T 3c4z_A 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTD--LCLVMTIM 267 (543)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCE--EEEEEEec
Confidence 56899999999999998 5799999999964322 235678999999999999999999999988766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 268 ~gg~L~~~l 276 (543)
T 3c4z_A 268 NGGDIRYHI 276 (543)
T ss_dssp TTCBHHHHH
T ss_pred cCCCHHHHH
Confidence 999998775
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=98.96 E-value=2.8e-10 Score=114.57 Aligned_cols=81 Identities=12% Similarity=0.231 Sum_probs=71.2
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhc-----------------HHHHHHHHHHHHcCCCCcceeeeEEEEc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRH-----------------KKEFAKEVKKIGSMRHPNIVPLRAYYWG 532 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~-----------------~~~~~~ei~~l~~l~H~niv~l~g~~~~ 532 (555)
.+.||+|+||.||+|+. +|+.||||.+....... .+.|.+|+.++.+++||||+++++++..
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 114 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN 114 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee
Confidence 67899999999999999 89999999985432211 1789999999999999999999999998
Q ss_pred CCCceEEEEEeccCCCChhhh
Q 048796 533 PREQERLLLADYIQGDSLALH 553 (555)
Q Consensus 533 ~~~~~~~lv~e~~~~GsL~~~ 553 (555)
.+. .++||||+++|+|.++
T Consensus 115 ~~~--~~lv~e~~~~~~L~~~ 133 (348)
T 2pml_X 115 YDE--VYIIYEYMENDSILKF 133 (348)
T ss_dssp SSE--EEEEEECCTTCBSSEE
T ss_pred CCe--EEEEEeccCCCcHHHH
Confidence 766 9999999999999886
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=5.4e-10 Score=112.87 Aligned_cols=83 Identities=18% Similarity=0.308 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|+. .+|+.||||.++... ....+.+..|..++..+ +||+|+++++++...+. .|+||||
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~--~~lv~E~ 102 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR--LYFVMEY 102 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE--EEEEEEC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE--EEEEEeC
Confidence 67899999999999998 468899999996532 22356788999999987 89999999999988776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 103 ~~gg~L~~~l 112 (353)
T 2i0e_A 103 VNGGDLMYHI 112 (353)
T ss_dssp CCSCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999998876
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=98.96 E-value=1.2e-09 Score=107.38 Aligned_cols=84 Identities=20% Similarity=0.337 Sum_probs=69.9
Q ss_pred CCeeecCCceEEEEEEe-CCC---CEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSG---HMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g---~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|++ .++ ..+|+|.+.... ....+.|.+|+.++++++||||+++++++...+. ..++|+||
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~v~e~ 104 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG-LPHVLLPY 104 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEEEECC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC-CcEEEEec
Confidence 67899999999999986 233 379999997533 3346789999999999999999999999976554 14999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+.+|+|.+++
T Consensus 105 ~~~~~L~~~~ 114 (298)
T 3pls_A 105 MCHGDLLQFI 114 (298)
T ss_dssp CTTCBHHHHH
T ss_pred ccCCCHHHHH
Confidence 9999999876
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=98.96 E-value=1.2e-09 Score=109.45 Aligned_cols=83 Identities=24% Similarity=0.468 Sum_probs=70.5
Q ss_pred CCeeecCCceEEEEEEeC-C----CCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATLD-S----GHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~----g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.++||+|+||.||+|+.. + +..||||.++... ......|.+|+.++++++||||+++++++...+. .++|||
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e 126 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP--MMIITE 126 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS--EEEEEE
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC--cEEEEe
Confidence 578999999999999862 2 2469999997543 3345679999999999999999999999987776 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 127 ~~~~~~L~~~l 137 (333)
T 1mqb_A 127 YMENGALDKFL 137 (333)
T ss_dssp CCTTEEHHHHH
T ss_pred CCCCCcHHHHH
Confidence 99999999876
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=8.3e-10 Score=107.40 Aligned_cols=81 Identities=20% Similarity=0.356 Sum_probs=68.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+++. .|+.||||.++... ..+.|.+|+.++.+++||||+++++++...+. ..++||||+++|+
T Consensus 26 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv~e~~~~~~ 101 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGS 101 (278)
T ss_dssp EEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEECCCTTEE
T ss_pred EeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC-ceEEEEecCCCCC
Confidence 67899999999999998 58899999997543 45789999999999999999999999765432 2899999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 102 L~~~l 106 (278)
T 1byg_A 102 LVDYL 106 (278)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98875
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=7.8e-10 Score=110.38 Aligned_cols=83 Identities=23% Similarity=0.364 Sum_probs=69.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEE--EEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHML--TVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~v--avK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+. .+|..+ |||.+.... ....+.+.+|+.++.++ +||||+++++++...+. .++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~--~~lv~e~ 107 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY--LYLAIEY 107 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTE--EEEEECC
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCc--eEEEEec
Confidence 67999999999999997 466644 999886532 23456799999999999 99999999999988776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 108 ~~~~~L~~~l 117 (327)
T 1fvr_A 108 APHGNLLDFL 117 (327)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999999876
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=7.2e-10 Score=110.74 Aligned_cols=83 Identities=18% Similarity=0.332 Sum_probs=71.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... .....+.+|+.++..++ ||||+++++++...+. .++||||+
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~--~~lv~e~~ 111 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE--IILILEYA 111 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe--EEEEEEec
Confidence 47899999999999997 5799999999865322 33678999999999995 6999999999987766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 112 ~~~~L~~~~ 120 (327)
T 3lm5_A 112 AGGEIFSLC 120 (327)
T ss_dssp TTEEGGGGG
T ss_pred CCCcHHHHH
Confidence 999998876
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1e-09 Score=107.05 Aligned_cols=82 Identities=15% Similarity=0.202 Sum_probs=69.0
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+.. .+..||+|.+.... ....+.|.+|+.++++++||||+++++++.. +. .++||||
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~--~~lv~e~ 96 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NP--VWIIMEL 96 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SS--CEEEEEC
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc-Cc--cEEEEec
Confidence 678999999999999873 24579999986543 3346789999999999999999999999853 44 8999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 97 ~~~~~L~~~l 106 (281)
T 1mp8_A 97 CTLGELRSFL 106 (281)
T ss_dssp CTTEEHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999998876
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.95 E-value=9.4e-10 Score=111.67 Aligned_cols=80 Identities=13% Similarity=0.159 Sum_probs=68.8
Q ss_pred CCeeecCCceEEEEEE------eCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC---CCcceeeeEEEEcCCCceEEE
Q 048796 470 AEVLGRSSHGTLYKAT------LDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR---HPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~------~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~---H~niv~l~g~~~~~~~~~~~l 540 (555)
.++||+|+||.||+|+ ..+++.||||.+.... ..++..|+.++..++ |+||+++++++...+. .++
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~--~~l 144 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG--SVL 144 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC--EEE
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC--cEE
Confidence 6789999999999994 3578899999997543 467888888888887 9999999999998777 999
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
|||||++|+|.+++
T Consensus 145 v~e~~~~g~L~~~l 158 (365)
T 3e7e_A 145 VGELYSYGTLLNAI 158 (365)
T ss_dssp EECCCCSCBHHHHH
T ss_pred EEeccCCCcHHHHH
Confidence 99999999999886
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=2.9e-10 Score=111.93 Aligned_cols=83 Identities=20% Similarity=0.299 Sum_probs=57.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+++.||||.+.... ....+++.+|+.++.+++||||+++++++...+. .++||||+++
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~ 97 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE--LWLVMKLLSG 97 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSC--EEEEEECCTT
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCC--cEEEehhccC
Confidence 67899999999999997 578999999986543 2335678999999999999999999999998777 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 98 ~~L~~~l 104 (303)
T 2vwi_A 98 GSVLDII 104 (303)
T ss_dssp CBHHHHH
T ss_pred CchHHHH
Confidence 9998875
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.95 E-value=3.2e-10 Score=114.40 Aligned_cols=201 Identities=17% Similarity=0.153 Sum_probs=134.4
Q ss_pred CCCCCCEEECCCCcCCC-CC-------C---CCCCCCCEEEcCCCcCCC---------CCcccccCCCCccEEEccCCcC
Q 048796 6 NSTTLSVLNLSSNSLSG-TL-------P---TSLKSCVILDLSRNMISG---------DISDMQNWEANLEILDLSSNKL 65 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~-~~-------~---~~l~~L~~L~L~~N~l~~---------~~~~~~~~~~~L~~L~Ls~N~l 65 (555)
....++.|.+......+ .. . ..+++|+.|.+..+.... ....++..+++|+.|+|++|.-
T Consensus 105 ~~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~ 184 (362)
T 2ra8_A 105 KLPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNN 184 (362)
T ss_dssp TGGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBT
T ss_pred CchhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCC
Confidence 44567888888766552 21 1 136799999997654321 1234456678999999999841
Q ss_pred CCCCCccccCCCCccEEEeeCCcCCCCCchhcc--CCCCccEEEcCC--CcCCCC-----Cchhh--hCCCCCCeEEccC
Q 048796 66 SGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLE--ISPRLVTLDVSS--NQLKGP-----IPDNF--FSSMALTNLNLSG 134 (555)
Q Consensus 66 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~--~l~~L~~L~L~~--N~l~~~-----~~~~~--~~~~~L~~L~Ls~ 134 (555)
. .++. + .+++|++|+|..|.+.......+. .+++|+.|+|+. |...+. +...+ ..+++|+.|+|.+
T Consensus 185 l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~ 261 (362)
T 2ra8_A 185 L-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVD 261 (362)
T ss_dssp C-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEES
T ss_pred c-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCC
Confidence 1 2333 3 388999999999998754434443 789999999853 222211 11122 2478999999999
Q ss_pred CcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcC----CccccCccccceeecccccccCCCchhccC-CCCCC
Q 048796 135 NGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVL----PSDIGNMGRLRLLNLANNHLSGKMPSELSK-LGALE 209 (555)
Q Consensus 135 N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~ 209 (555)
|.+....+..+... ..+++|++|+|+.|.|++.. +..+..+++|+.|+|++|.|+...-..+.. + ..
T Consensus 262 ~~i~~~~~~~la~a------~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~ 333 (362)
T 2ra8_A 262 AEEQNVVVEMFLES------DILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PM 333 (362)
T ss_dssp CTTHHHHHHHHHHC------SSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CS
T ss_pred CCCchHHHHHHHhC------ccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CC
Confidence 99875433322221 23489999999999998743 333456789999999999998654444543 2 46
Q ss_pred EEeCCCCc
Q 048796 210 YLDLSGNQ 217 (555)
Q Consensus 210 ~L~Ls~N~ 217 (555)
.+++++|+
T Consensus 334 ~~~~~~~~ 341 (362)
T 2ra8_A 334 KIDVSDSQ 341 (362)
T ss_dssp EEECCSBC
T ss_pred EEEecCCc
Confidence 78999887
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=5.7e-10 Score=113.53 Aligned_cols=83 Identities=25% Similarity=0.414 Sum_probs=63.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHH-HHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKK-IGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~-l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+++. .+++.||||.++.... ...+.+..|..+ ++.++||||+++++++.+.+. .|+||||
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~--~~lv~E~ 120 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK--LYFVLDY 120 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSE--EEEEEEC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCE--EEEEEeC
Confidence 67999999999999998 5789999999965332 224456677766 577899999999999998776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 121 ~~gg~L~~~l 130 (373)
T 2r5t_A 121 INGGELFYHL 130 (373)
T ss_dssp CCSCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999998876
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=98.94 E-value=1.4e-09 Score=106.89 Aligned_cols=84 Identities=20% Similarity=0.272 Sum_probs=70.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC-----------Cce
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR-----------EQE 537 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~-----------~~~ 537 (555)
.+.||+|+||.||+|+. .+|+.||||.+... ....+.+.+|+.++++++||||+++++++.... ...
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST 89 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCc
Confidence 67899999999999997 57999999998643 234577999999999999999999999886421 224
Q ss_pred EEEEEeccCCCChhhhh
Q 048796 538 RLLLADYIQGDSLALHL 554 (555)
Q Consensus 538 ~~lv~e~~~~GsL~~~l 554 (555)
.++||||+++|+|.+++
T Consensus 90 ~~lv~e~~~~~~L~~~l 106 (303)
T 1zy4_A 90 LFIQMEYCENGTLYDLI 106 (303)
T ss_dssp EEEEEECCCSCBHHHHH
T ss_pred eEEEEecCCCCCHHHhh
Confidence 89999999999999876
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=98.94 E-value=1.9e-09 Score=109.44 Aligned_cols=83 Identities=22% Similarity=0.331 Sum_probs=71.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--------hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--------RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--------~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 539 (555)
.+.||+|+||.||+|+. .+|+.||||.++.... ...+.+.+|+.++.++ +||||+++++++..... .+
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~--~~ 176 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF--MF 176 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSE--EE
T ss_pred ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCE--EE
Confidence 57899999999999998 5799999999865331 1145688999999998 79999999999987766 99
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+||||+++|+|.+++
T Consensus 177 lv~e~~~g~~L~~~l 191 (365)
T 2y7j_A 177 LVFDLMRKGELFDYL 191 (365)
T ss_dssp EEECCCTTCBHHHHH
T ss_pred EEEEeCCCCcHHHHH
Confidence 999999999998875
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=98.94 E-value=9.6e-10 Score=110.56 Aligned_cols=79 Identities=18% Similarity=0.269 Sum_probs=67.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... .+.+|+.++.++ +||||+++++++.+.+. .|+||||+++
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~--~~lv~E~~~g 100 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKY--VYVVTELMKG 100 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSE--EEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCE--EEEEEeCCCC
Confidence 57899999999999997 5789999999965432 235678888777 79999999999988776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 101 g~L~~~i 107 (342)
T 2qr7_A 101 GELLDKI 107 (342)
T ss_dssp CBHHHHH
T ss_pred CcHHHHH
Confidence 9998875
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=2.6e-09 Score=104.39 Aligned_cols=83 Identities=19% Similarity=0.272 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+.++++++||||+++++++...+. .++|+||++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~ 104 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSS--FYIVGELYT 104 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEECCCC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCe--EEEEEEccC
Confidence 67899999999999997 478999999985432 2346789999999999999999999999987766 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 105 ~~~L~~~l 112 (287)
T 2wei_A 105 GGELFDEI 112 (287)
T ss_dssp SCBHHHHH
T ss_pred CCCHHHHH
Confidence 99998765
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.94 E-value=1.6e-09 Score=111.58 Aligned_cols=92 Identities=21% Similarity=0.312 Sum_probs=69.0
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEeC---CCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCc
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATLD---SGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ 536 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~ 536 (555)
..+++.....+++||+|+||.||+|+.. +++.||||.+.... ..+.+.+|+.++++++||||+++++++......
T Consensus 16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 5566666666789999999999999963 57899999996543 245788999999999999999999999654333
Q ss_pred eEEEEEeccCCCChhhhh
Q 048796 537 ERLLLADYIQGDSLALHL 554 (555)
Q Consensus 537 ~~~lv~e~~~~GsL~~~l 554 (555)
..++||||+++ +|.+++
T Consensus 94 ~~~lv~e~~~~-~l~~~~ 110 (405)
T 3rgf_A 94 KVWLLFDYAEH-DLWHII 110 (405)
T ss_dssp EEEEEEECCSE-EHHHHH
T ss_pred eEEEEEeCCCC-CHHHHH
Confidence 49999999985 676654
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=7.6e-10 Score=110.73 Aligned_cols=82 Identities=22% Similarity=0.281 Sum_probs=70.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.++||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.++.+++||||+++++++...+. .++||||++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~ 107 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKR--WYLVFEFVD 107 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECCS
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCE--EEEEEecCC
Confidence 67999999999999997 569999999985432 2235678899999999999999999999988776 999999999
Q ss_pred CCChhhh
Q 048796 547 GDSLALH 553 (555)
Q Consensus 547 ~GsL~~~ 553 (555)
+|+|.++
T Consensus 108 ~~~l~~~ 114 (331)
T 4aaa_A 108 HTILDDL 114 (331)
T ss_dssp EEHHHHH
T ss_pred cchHHHH
Confidence 9988765
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=98.93 E-value=2e-09 Score=105.73 Aligned_cols=84 Identities=24% Similarity=0.335 Sum_probs=68.8
Q ss_pred CCeeecCCceEEEEEEeCC----CCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLDS----GHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~----g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|+..+ ...+|||.+.... ....+.|.+|+.++++++||||++++++|...+. ..++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~v~e~ 108 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPY 108 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEEEEEC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC-ceEEEEeC
Confidence 6789999999999998622 2368999987533 3345789999999999999999999999765432 38999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 109 ~~~~~L~~~l 118 (298)
T 3f66_A 109 MKHGDLRNFI 118 (298)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999999876
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.93 E-value=1.6e-09 Score=107.40 Aligned_cols=81 Identities=23% Similarity=0.420 Sum_probs=67.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ..+.+.+|+.++..++||||+++++++...+. .++||||+++|
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~ 109 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTD--LWIVMEYCGAG 109 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTE--EEEEEECCTTE
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCE--EEEEeecCCCC
Confidence 67899999999999998 569999999986533 35678999999999999999999999987766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 110 ~L~~~~ 115 (314)
T 3com_A 110 SVSDII 115 (314)
T ss_dssp EHHHHH
T ss_pred CHHHHH
Confidence 998875
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=98.93 E-value=1.2e-09 Score=107.09 Aligned_cols=80 Identities=20% Similarity=0.324 Sum_probs=68.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++.+++||||+++++++...+. .++||||++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~ 84 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK--LTLVFEFCD 84 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE--EEEEEECCS
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCE--EEEEEecCC
Confidence 56899999999999997 5789999999964332 235778999999999999999999999988776 999999998
Q ss_pred CCChhh
Q 048796 547 GDSLAL 552 (555)
Q Consensus 547 ~GsL~~ 552 (555)
+ ++.+
T Consensus 85 ~-~l~~ 89 (292)
T 3o0g_A 85 Q-DLKK 89 (292)
T ss_dssp E-EHHH
T ss_pred C-CHHH
Confidence 6 4443
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=1e-09 Score=107.32 Aligned_cols=81 Identities=25% Similarity=0.429 Sum_probs=68.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhc-------HHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRH-------KKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~-------~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|+. .+++.||||.+....... .+.|.+|+.++.+++||||+++++++... .++|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~lv 99 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP----PRMV 99 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT----TEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC----CeEE
Confidence 67899999999999997 689999999986433221 26799999999999999999999988643 4799
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 100 ~e~~~~~~L~~~l 112 (287)
T 4f0f_A 100 MEFVPCGDLYHRL 112 (287)
T ss_dssp EECCTTCBHHHHH
T ss_pred EEecCCCCHHHHH
Confidence 9999999998765
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=2e-09 Score=105.53 Aligned_cols=80 Identities=21% Similarity=0.233 Sum_probs=66.6
Q ss_pred eeecCCceEEEEEEe---CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 472 VLGRSSHGTLYKATL---DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 472 ~lG~G~~g~vy~~~~---~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.||+|+||.||+|.+ .+++.||||.++.... ...+.|.+|+.++..++||||+++++++. .+. .++||||++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~--~~lv~e~~~ 100 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AES--WMLVMEMAE 100 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-SSS--EEEEEECCT
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC-CCC--cEEEEEeCC
Confidence 899999999999965 3578899999965432 23578999999999999999999999994 445 899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 101 ~~~L~~~l 108 (291)
T 1xbb_A 101 LGPLNKYL 108 (291)
T ss_dssp TEEHHHHH
T ss_pred CCCHHHHH
Confidence 99999876
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=1.7e-09 Score=107.58 Aligned_cols=82 Identities=13% Similarity=0.298 Sum_probs=67.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~l 540 (555)
.+.||+|+||.||+|+. .+++.||||.+..... .....+.+|+.++.+++||||+++++++... . .++
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~--~~l 91 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-D--YYI 91 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-S--EEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-c--eEE
Confidence 67899999999999997 5789999999864321 1234588999999999999999999998753 4 899
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
||||+++|+|.+++
T Consensus 92 v~e~~~~~~L~~~~ 105 (322)
T 2ycf_A 92 VLELMEGGELFDKV 105 (322)
T ss_dssp EEECCTTEETHHHH
T ss_pred EEecCCCCcHHHHH
Confidence 99999999998875
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=98.92 E-value=1.5e-09 Score=108.31 Aligned_cols=82 Identities=23% Similarity=0.319 Sum_probs=64.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCE----EEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHM----LTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~----vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.++||+|+||.||+|++ .+|+. ||+|.+.... ....+.|.+|+.++++++||||++++++|... . .++|+|
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~--~~~v~e 96 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T--VQLITQ 96 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-S--EEEEEE
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-C--eEEEEE
Confidence 67999999999999996 44543 5888875432 34467899999999999999999999999864 3 789999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 97 ~~~~g~L~~~l 107 (327)
T 3poz_A 97 LMPFGCLLDYV 107 (327)
T ss_dssp CCTTCBHHHHH
T ss_pred ecCCCcHHHHH
Confidence 99999999876
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=8.8e-10 Score=110.20 Aligned_cols=82 Identities=21% Similarity=0.310 Sum_probs=67.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+.++++++||||+++++++...+. .++||||++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~ 116 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHR--LHLIFEYAE 116 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTE--EEEEEECCS
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCE--EEEEEecCC
Confidence 67899999999999986 5789999999965433 224678899999999999999999999988776 999999998
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+ +|.+++
T Consensus 117 ~-~L~~~~ 123 (329)
T 3gbz_A 117 N-DLKKYM 123 (329)
T ss_dssp E-EHHHHH
T ss_pred C-CHHHHH
Confidence 5 888765
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.91 E-value=2.2e-09 Score=105.77 Aligned_cols=83 Identities=18% Similarity=0.281 Sum_probs=67.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC----hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL----VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||++.. .+++.+|||.+.... ....+.+.+|+.++++++||||+++++++...+....++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY 89 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence 78999999999999997 578999999996532 2235789999999999999999999999864433338999999
Q ss_pred cCCCChhhh
Q 048796 545 IQGDSLALH 553 (555)
Q Consensus 545 ~~~GsL~~~ 553 (555)
+++| |.++
T Consensus 90 ~~~~-l~~~ 97 (305)
T 2wtk_C 90 CVCG-MQEM 97 (305)
T ss_dssp CSEE-HHHH
T ss_pred ccCC-HHHH
Confidence 9987 5544
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=1.6e-09 Score=106.59 Aligned_cols=81 Identities=22% Similarity=0.338 Sum_probs=65.8
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHc--CCCCcceeeeEEEEcC--CCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGS--MRHPNIVPLRAYYWGP--REQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~--l~H~niv~l~g~~~~~--~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|++ +|+.||||.+... ..+.+..|.+++.. ++||||+++++++... .....++||||+
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 88 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH 88 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhc
Confidence 67899999999999998 7899999998653 34556667766665 8999999999987542 122389999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 89 ~~g~L~~~l 97 (301)
T 3q4u_A 89 EMGSLYDYL 97 (301)
T ss_dssp TTCBHHHHH
T ss_pred cCCCHHHHH
Confidence 999999876
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=98.91 E-value=1.2e-09 Score=111.23 Aligned_cols=84 Identities=25% Similarity=0.390 Sum_probs=69.0
Q ss_pred CCeeecCCceEEEEEEe--CCC--CEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL--DSG--HMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--~~g--~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|++ .++ ..+|||.++... ....+.|.+|+.++++++||||++++++|...+. ..++||||
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~-~~~lv~e~ 172 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPY 172 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS-CCEEEEEC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC-CeEEEEEC
Confidence 57899999999999986 232 468999986532 3446789999999999999999999999865432 28999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 173 ~~~g~L~~~l 182 (373)
T 3c1x_A 173 MKHGDLRNFI 182 (373)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999999876
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=2.1e-09 Score=104.73 Aligned_cols=82 Identities=20% Similarity=0.290 Sum_probs=68.9
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|++. .+..||||.+... .....+.|.+|+.++++++||||+++++++.. +. .++||||
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~--~~~v~e~ 93 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EP--TWIIMEL 93 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SS--CEEEEEC
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CC--CEEEEec
Confidence 679999999999999862 2346999999754 33346789999999999999999999999865 34 7999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 94 ~~~~~L~~~l 103 (281)
T 3cc6_A 94 YPYGELGHYL 103 (281)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999998876
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=98.90 E-value=3.2e-09 Score=105.91 Aligned_cols=82 Identities=22% Similarity=0.346 Sum_probs=70.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+++.||||.+... ..+.+.+|+.++.+++ ||||+++++++........++||||+++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 117 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNN 117 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCc
Confidence 67999999999999986 67999999998743 3477899999999997 9999999999987433338999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 118 ~~l~~~~ 124 (330)
T 3nsz_A 118 TDFKQLY 124 (330)
T ss_dssp CCHHHHG
T ss_pred hhHHHHH
Confidence 9998765
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.90 E-value=2.1e-09 Score=106.60 Aligned_cols=84 Identities=21% Similarity=0.278 Sum_probs=65.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC------------CCc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP------------REQ 536 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~------------~~~ 536 (555)
.+.||+|+||.||+|+. .+|+.||||.+........+.+.+|+.++++++||||+++++++... ...
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~ 95 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN 95 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCS
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccC
Confidence 67899999999999998 46899999999776666678899999999999999999999987432 112
Q ss_pred eEEEEEeccCCCChhhhh
Q 048796 537 ERLLLADYIQGDSLALHL 554 (555)
Q Consensus 537 ~~~lv~e~~~~GsL~~~l 554 (555)
..++||||++ |+|.+++
T Consensus 96 ~~~lv~e~~~-~~L~~~~ 112 (320)
T 2i6l_A 96 SVYIVQEYME-TDLANVL 112 (320)
T ss_dssp EEEEEEECCS-EEHHHHH
T ss_pred ceeEEeeccC-CCHHHHh
Confidence 3899999998 6898775
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.90 E-value=1.7e-09 Score=107.76 Aligned_cols=84 Identities=18% Similarity=0.353 Sum_probs=71.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCC----CceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPR----EQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~----~~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ..+.+.+|+.++.++ +||||+++++++.... ....++|||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e 107 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 107 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEE
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEE
Confidence 67899999999999997 6799999999865432 357789999999998 8999999999997632 223899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 108 ~~~~~~L~~~l 118 (326)
T 2x7f_A 108 FCGAGSVTDLI 118 (326)
T ss_dssp CCTTEEHHHHH
T ss_pred cCCCCcHHHHH
Confidence 99999998876
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=98.89 E-value=1.7e-09 Score=105.28 Aligned_cols=81 Identities=20% Similarity=0.369 Sum_probs=68.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC--------------C
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP--------------R 534 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~--------------~ 534 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... +.+.+|+.++.+++||||+++++++... .
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccC
Confidence 67899999999999998 479999999996543 3567899999999999999999987541 1
Q ss_pred CceEEEEEeccCCCChhhhh
Q 048796 535 EQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 535 ~~~~~lv~e~~~~GsL~~~l 554 (555)
....++||||+++|+|.+++
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l 111 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWI 111 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHH
T ss_pred cceEEEEEeccCCCCHHHHH
Confidence 12379999999999999876
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=98.89 E-value=1.5e-09 Score=107.44 Aligned_cols=84 Identities=21% Similarity=0.339 Sum_probs=70.3
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|+. .+++.||||.+..... ...+.+.+|+.++.++ +||||+++++++...+. ..++|
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~-~~~lv 110 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVI 110 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS-CCEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC-ceEEE
Confidence 67899999999999984 3568899999976433 3456799999999999 79999999999876432 38999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
+||+++|+|.+++
T Consensus 111 ~e~~~~~~L~~~l 123 (316)
T 2xir_A 111 VEFCKFGNLSTYL 123 (316)
T ss_dssp EECCTTEEHHHHH
T ss_pred EEcCCCCcHHHHH
Confidence 9999999999876
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=98.88 E-value=3.7e-10 Score=113.26 Aligned_cols=82 Identities=10% Similarity=0.164 Sum_probs=65.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCC--------hhcHHHHHHHHHHHHcCC---------CCcceeeeEEEEc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGL--------VRHKKEFAKEVKKIGSMR---------HPNIVPLRAYYWG 532 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~--------~~~~~~~~~ei~~l~~l~---------H~niv~l~g~~~~ 532 (555)
.+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|+.++++++ |||||++.+.+..
T Consensus 25 ~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~ 103 (336)
T 2vuw_A 25 CEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCV 103 (336)
T ss_dssp CEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEE
T ss_pred eeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEe
Confidence 78999999999999998 78999999996532 123478899999998885 8888888876531
Q ss_pred ------------------------------CCCceEEEEEeccCCCChhhhh
Q 048796 533 ------------------------------PREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 533 ------------------------------~~~~~~~lv~e~~~~GsL~~~l 554 (555)
.+. .++||||+++|++.+.+
T Consensus 104 ~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~lv~E~~~~g~ll~~~ 153 (336)
T 2vuw_A 104 QGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ--LFIVLEFEFGGIDLEQM 153 (336)
T ss_dssp ESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTC--EEEEEEEECCCEETGGG
T ss_pred cCCCcHHHHHHHHHHhhhccccccCccccccCe--EEEEEEecCCCccHHHH
Confidence 344 99999999999766554
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=5e-09 Score=105.03 Aligned_cols=81 Identities=22% Similarity=0.342 Sum_probs=68.9
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHc--CCCCcceeeeEEEEcCCC--ceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGS--MRHPNIVPLRAYYWGPRE--QERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~--l~H~niv~l~g~~~~~~~--~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. +|+.||||.+... ..+.+.+|+.++.. ++||||+++++++..... ...++||||+
T Consensus 47 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~ 122 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 122 (342)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCC
T ss_pred EeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeec
Confidence 67899999999999998 6899999998643 34677888888877 799999999999987651 1289999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 123 ~~g~L~~~l 131 (342)
T 1b6c_B 123 EHGSLFDYL 131 (342)
T ss_dssp TTCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999999876
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=2.2e-09 Score=106.31 Aligned_cols=85 Identities=20% Similarity=0.371 Sum_probs=66.0
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCc---eEEE
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ---ERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~---~~~l 540 (555)
.+.||+|+||.||+|... .+..||||.+... .....+.|.+|+.++++++||||+++++++...+.. ..++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 118 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV 118 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEE
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEE
Confidence 678999999999999862 3458999998654 233457799999999999999999999999765431 2599
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
|+||+++|+|.+++
T Consensus 119 v~e~~~~~~L~~~l 132 (313)
T 3brb_A 119 ILPFMKYGDLHTYL 132 (313)
T ss_dssp EEECCTTCBHHHHH
T ss_pred EEecccCCCHHHHH
Confidence 99999999998876
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.87 E-value=4.8e-09 Score=103.88 Aligned_cols=82 Identities=23% Similarity=0.281 Sum_probs=65.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||++.... ......+..|+..+.++ +||||++++++|...+. .++||||+
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~--~~lv~e~~ 139 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGI--LYLQTELC 139 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECC
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCE--EEEEEecc
Confidence 67899999999999998 479999999986432 23344566666665554 99999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+|+|.+++
T Consensus 140 -~~~L~~~~ 147 (311)
T 3p1a_A 140 -GPSLQQHC 147 (311)
T ss_dssp -CCBHHHHH
T ss_pred -CCCHHHHH
Confidence 66887764
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=98.86 E-value=9.5e-10 Score=111.23 Aligned_cols=83 Identities=24% Similarity=0.414 Sum_probs=70.7
Q ss_pred CCeeecCCceEEEEEEe----CCCCEEEEEEeccCC----hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEE
Q 048796 470 AEVLGRSSHGTLYKATL----DSGHMLTVKWLRVGL----VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~----~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~l 540 (555)
.+.||+|+||.||+++. .+|+.||||.++... ....+.+.+|+.++..+ +||||+++++++...+. .++
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~--~~l 136 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK--LHL 136 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE--EEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce--EEE
Confidence 67899999999999987 378999999986432 12345678899999999 69999999999987776 999
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
||||+++|+|.+++
T Consensus 137 v~e~~~~~~L~~~l 150 (355)
T 1vzo_A 137 ILDYINGGELFTHL 150 (355)
T ss_dssp EECCCCSCBHHHHH
T ss_pred EeecCCCCCHHHHH
Confidence 99999999998876
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=2.9e-09 Score=110.67 Aligned_cols=84 Identities=15% Similarity=0.195 Sum_probs=69.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC---ceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE---QERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~---~~~~lv~e 543 (555)
.++||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++..... ...|+|||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 110 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE 110 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEe
Confidence 67899999999999997 57889999999653 23346789999999999999999999999876521 23899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|++ |+|.+++
T Consensus 111 ~~~-~~L~~~~ 120 (432)
T 3n9x_A 111 IAD-SDLKKLF 120 (432)
T ss_dssp CCS-EEHHHHH
T ss_pred cCC-cCHHHHH
Confidence 997 4888765
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... | Back alignment and structure |
|---|
Probab=98.86 E-value=2.7e-09 Score=104.79 Aligned_cols=82 Identities=22% Similarity=0.382 Sum_probs=67.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++++++||||+++++++...+. .++||||++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~ 85 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLH 85 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTE--EEEEEECCS
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCc--eEEEEEccc
Confidence 56899999999999997 5799999999865332 234778999999999999999999999988776 999999998
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
|+|.+++
T Consensus 86 -~~L~~~~ 92 (299)
T 2r3i_A 86 -QDLKKFM 92 (299)
T ss_dssp -EEHHHHH
T ss_pred -CCHHHHH
Confidence 5887765
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.86 E-value=8.5e-10 Score=110.04 Aligned_cols=82 Identities=22% Similarity=0.331 Sum_probs=66.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh-cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+++.||||.+...... ....+.+|+.++++++||||+++++++...+. .++||||+++
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~ 84 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKS--LTLVFEYLDK 84 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSC--EEEEEECCSE
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCE--EEEEeccccc
Confidence 56899999999999997 57899999999654322 12345689999999999999999999998777 9999999984
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
+|.+++
T Consensus 85 -~l~~~~ 90 (324)
T 3mtl_A 85 -DLKQYL 90 (324)
T ss_dssp -EHHHHH
T ss_pred -CHHHHH
Confidence 787654
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=98.85 E-value=2.5e-09 Score=107.72 Aligned_cols=82 Identities=22% Similarity=0.422 Sum_probs=66.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh-----cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR-----HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~-----~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .+|+.||||.+...... ..+.+.+|+.++..++||||+++++++...+. .++|||
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e 92 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN--ISLVFD 92 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC--CEEEEE
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc--eEEEEE
Confidence 67899999999999997 57999999999653221 13468899999999999999999999987776 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++ +|.+++
T Consensus 93 ~~~~-~l~~~~ 102 (346)
T 1ua2_A 93 FMET-DLEVII 102 (346)
T ss_dssp CCSE-EHHHHH
T ss_pred cCCC-CHHHHH
Confidence 9986 777654
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=98.85 E-value=3e-09 Score=109.38 Aligned_cols=79 Identities=19% Similarity=0.273 Sum_probs=64.7
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHH-HcCCCCcceeeeEEEEc--CCCceEEEEEeccC
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKI-GSMRHPNIVPLRAYYWG--PREQERLLLADYIQ 546 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l-~~l~H~niv~l~g~~~~--~~~~~~~lv~e~~~ 546 (555)
++||+|+||.||+|+. .+|+.||||.++. ...+.+|+.++ +..+||||+++++++.. .+....|+|||||+
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 5899999999999997 5799999999863 24567888876 45689999999998864 12223899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 143 gg~L~~~l 150 (400)
T 1nxk_A 143 GGELFSRI 150 (400)
T ss_dssp SEEHHHHH
T ss_pred CCcHHHHH
Confidence 99999876
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=98.85 E-value=4.4e-09 Score=106.41 Aligned_cols=81 Identities=17% Similarity=0.192 Sum_probs=70.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-----CCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-----HPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-----H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .+++.||||.+... ....+.+..|+.++..++ ||||+++++++...+. .++|||
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~--~~lv~e 116 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH--MCLIFE 116 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE--EEEEEC
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe--eEEEEc
Confidence 67899999999999997 67899999999643 234567788999999886 9999999999988776 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+ +|+|.+++
T Consensus 117 ~~-~~~L~~~~ 126 (360)
T 3llt_A 117 PL-GPSLYEII 126 (360)
T ss_dssp CC-CCBHHHHH
T ss_pred CC-CCCHHHHH
Confidence 99 88998875
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=98.85 E-value=3.5e-09 Score=103.63 Aligned_cols=80 Identities=29% Similarity=0.433 Sum_probs=67.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+.. ..+|||.++... ....+.|.+|+.++++++||||+++++++.. +. .++||||+++
T Consensus 29 ~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~--~~lv~e~~~~ 103 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQ--LAIVTQWCEG 103 (289)
T ss_dssp EEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SS--CEEEEECCCE
T ss_pred eeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC-Cc--cEEEEEecCC
Confidence 678999999999999873 359999986543 3345789999999999999999999997643 44 7999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 104 ~~L~~~l 110 (289)
T 3og7_A 104 SSLYHHL 110 (289)
T ss_dssp EEHHHHH
T ss_pred CcHHHHH
Confidence 9998876
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=98.84 E-value=3.2e-09 Score=108.71 Aligned_cols=84 Identities=20% Similarity=0.331 Sum_probs=62.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.++..+. ||||+++++++...+....|+|||||
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 57899999999999997 67999999998543 2334677889999999997 99999999999865533489999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+ |+|.+++
T Consensus 94 ~-~~L~~~~ 101 (388)
T 3oz6_A 94 E-TDLHAVI 101 (388)
T ss_dssp S-EEHHHHH
T ss_pred C-cCHHHHH
Confidence 8 5887764
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=1.5e-09 Score=108.18 Aligned_cols=82 Identities=26% Similarity=0.332 Sum_probs=66.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCE----EEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHM----LTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~----vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|++ .++.. ||+|.+.... ....+.+.+|+.+++.++||||++++++|.. +. .++|+|
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~--~~~v~e 94 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SS--LQLVTQ 94 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SS--EEEEEE
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-Cc--cEEEEE
Confidence 67899999999999997 45544 7888775432 2334567889999999999999999999864 44 899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 95 ~~~~~~L~~~l 105 (325)
T 3kex_A 95 YLPLGSLLDHV 105 (325)
T ss_dssp CCTTCBSHHHH
T ss_pred eCCCCCHHHHH
Confidence 99999998875
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=98.84 E-value=2.8e-09 Score=111.63 Aligned_cols=84 Identities=12% Similarity=0.132 Sum_probs=60.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC---CceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR---EQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~e 543 (555)
.++||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.++..++|||||++++++.... ....|+|||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 137 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE 137 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEC
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEe
Confidence 78999999999999987 57999999999653 2334678999999999999999999999985432 123899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+. |+|.+++
T Consensus 138 ~~~-~~L~~~~ 147 (458)
T 3rp9_A 138 IAD-SDFKKLF 147 (458)
T ss_dssp CCS-EEHHHHH
T ss_pred ccc-cchhhhc
Confidence 985 5887764
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.84 E-value=2.6e-09 Score=106.74 Aligned_cols=84 Identities=25% Similarity=0.277 Sum_probs=70.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcC------CCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGP------REQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~------~~~~~~lv 541 (555)
.++||+|+||.||+|+. .+|+.||||++........+.+.+|+.++.++. ||||+++++++... .....++|
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 112 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEE
Confidence 77999999999999997 579999999986665556778999999999996 99999999998421 22237999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
+||++ |+|.+++
T Consensus 113 ~e~~~-g~L~~~l 124 (337)
T 3ll6_A 113 TELCK-GQLVEFL 124 (337)
T ss_dssp EECCS-EEHHHHH
T ss_pred EEecC-CCHHHHH
Confidence 99996 6888765
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=98.83 E-value=7.1e-09 Score=101.24 Aligned_cols=82 Identities=18% Similarity=0.248 Sum_probs=64.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hc-HHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RH-KKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~-~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||++..... .. .+.+.++...++.++||||+++++++...+. .++||||++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~--~~lv~e~~~ 89 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGD--VWICMELMD 89 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSS--EEEEEECCS
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCC--EEEEEehhc
Confidence 67899999999999997 6899999999965422 22 3334455556888999999999999998777 999999998
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+ +|.+++
T Consensus 90 ~-~l~~~l 96 (290)
T 3fme_A 90 T-SLDKFY 96 (290)
T ss_dssp E-EHHHHH
T ss_pred c-chHHHH
Confidence 5 776654
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=2.1e-09 Score=107.39 Aligned_cols=80 Identities=11% Similarity=0.094 Sum_probs=68.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... .+.+.+|+.++.++ +||||+++++++...+. .++||||+ +
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~--~~lv~e~~-~ 88 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKY--NAMVLELL-G 88 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTE--EEEEEECC-C
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCc--cEEEEEeC-C
Confidence 67899999999999996 6899999999865332 34688999999999 99999999999988766 89999999 9
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 89 ~~L~~~~ 95 (330)
T 2izr_A 89 PSLEDLF 95 (330)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 9998875
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.83 E-value=2e-09 Score=107.86 Aligned_cols=83 Identities=16% Similarity=0.223 Sum_probs=70.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~l 540 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++.+++||||+++++++...+. .++
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~--~~l 106 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF--FQL 106 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE--EEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE--EEE
Confidence 67899999999999996 6789999999865321 123457889999999999999999999987776 999
Q ss_pred EEeccCCC-Chhhhh
Q 048796 541 LADYIQGD-SLALHL 554 (555)
Q Consensus 541 v~e~~~~G-sL~~~l 554 (555)
||||+.+| +|.+++
T Consensus 107 v~e~~~~g~~l~~~~ 121 (335)
T 3dls_A 107 VMEKHGSGLDLFAFI 121 (335)
T ss_dssp EEECCTTSCBHHHHH
T ss_pred EEEeCCCCccHHHHH
Confidence 99999887 888765
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=98.82 E-value=2.7e-09 Score=108.36 Aligned_cols=84 Identities=19% Similarity=0.279 Sum_probs=63.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+. .+.++||
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 109 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEE
Confidence 67899999999999997 67999999999543 22335778999999999999999999999876532 2369999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+ +++|.+++
T Consensus 110 e~~-~~~L~~~~ 120 (367)
T 1cm8_A 110 PFM-GTDLGKLM 120 (367)
T ss_dssp ECC-SEEHHHHH
T ss_pred ecC-CCCHHHHH
Confidence 999 77888765
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=2.9e-09 Score=107.86 Aligned_cols=84 Identities=18% Similarity=0.273 Sum_probs=67.8
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh-----------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC---C
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV-----------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR---E 535 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~-----------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~---~ 535 (555)
.+.||+|+||.||+|+..+|..||||++..... ...+.+.+|+.++.+++||||+++++++...+ .
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 106 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM 106 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTC
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCc
Confidence 678999999999999987799999999854221 11378999999999999999999999985422 1
Q ss_pred ceEEEEEeccCCCChhhhh
Q 048796 536 QERLLLADYIQGDSLALHL 554 (555)
Q Consensus 536 ~~~~lv~e~~~~GsL~~~l 554 (555)
...++||||++ |+|.+++
T Consensus 107 ~~~~lv~e~~~-~~l~~~~ 124 (362)
T 3pg1_A 107 HKLYLVTELMR-TDLAQVI 124 (362)
T ss_dssp CEEEEEEECCS-EEHHHHH
T ss_pred ceEEEEEccCC-CCHHHHH
Confidence 23799999998 5777654
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.82 E-value=4.3e-09 Score=105.80 Aligned_cols=82 Identities=10% Similarity=0.233 Sum_probs=70.6
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCC--CcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRH--PNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H--~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||++...+++.||||.+... .....+.|.+|+.++.+++| +||+++++++...+. .++||| +
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~--~~lv~e-~ 90 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY--IYMVME-C 90 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--EEEEEC-C
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCE--EEEEEe-C
Confidence 6789999999999999888999999998643 23345789999999999987 999999999998776 999999 5
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
.+|+|.+++
T Consensus 91 ~~~~L~~~l 99 (343)
T 3dbq_A 91 GNIDLNSWL 99 (343)
T ss_dssp CSEEHHHHH
T ss_pred CCCCHHHHH
Confidence 678998875
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=6.1e-09 Score=102.49 Aligned_cols=79 Identities=19% Similarity=0.273 Sum_probs=65.6
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHH-HcCCCCcceeeeEEEEc--CCCceEEEEEeccC
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKI-GSMRHPNIVPLRAYYWG--PREQERLLLADYIQ 546 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l-~~l~H~niv~l~g~~~~--~~~~~~~lv~e~~~ 546 (555)
++||+|+||.||+++. .+++.||||.++. ...+.+|+.++ +..+||||+++++++.. .+....++||||++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 6799999999999997 6799999999864 24577888887 66799999999999865 11223899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 99 ~~~L~~~l 106 (299)
T 3m2w_A 99 GGELFSRI 106 (299)
T ss_dssp SCBHHHHH
T ss_pred CCcHHHHH
Confidence 99998876
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=3.8e-09 Score=110.75 Aligned_cols=83 Identities=18% Similarity=0.234 Sum_probs=68.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+. .+.|+||
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 146 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 146 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEE
Confidence 67899999999999987 57899999999653 33346778999999999999999999999965432 2479999
Q ss_pred eccCCCChhhh
Q 048796 543 DYIQGDSLALH 553 (555)
Q Consensus 543 e~~~~GsL~~~ 553 (555)
|||+++ |.+.
T Consensus 147 E~~~~~-l~~~ 156 (464)
T 3ttj_A 147 ELMDAN-LCQV 156 (464)
T ss_dssp ECCSEE-HHHH
T ss_pred eCCCCC-HHHH
Confidence 999875 5544
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=8.8e-09 Score=105.47 Aligned_cols=82 Identities=10% Similarity=0.227 Sum_probs=70.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCC--CCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMR--HPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~--H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||++...+++.||||.+... .....+.|.+|+.++.+++ ||||+++++++...+. .++||| +
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~--~~lv~E-~ 137 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY--IYMVME-C 137 (390)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--EEEEEE-C
T ss_pred EEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCE--EEEEEe-c
Confidence 6789999999999999877999999998643 3344678999999999996 5999999999988776 999999 5
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
.+|+|.+++
T Consensus 138 ~~~~L~~~l 146 (390)
T 2zmd_A 138 GNIDLNSWL 146 (390)
T ss_dssp CSEEHHHHH
T ss_pred CCCCHHHHH
Confidence 678998876
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=98.80 E-value=1.8e-09 Score=110.16 Aligned_cols=84 Identities=17% Similarity=0.226 Sum_probs=66.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHH---HHHHcCCCCcceeee-------EEEEcCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEV---KKIGSMRHPNIVPLR-------AYYWGPRE 535 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei---~~l~~l~H~niv~l~-------g~~~~~~~ 535 (555)
.+.||+|+||.||+|+. .+|+.||||.+... .....+.|.+|+ ..+++++|||||+++ +++...+.
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 67899999999999997 67999999999642 223457899999 566677899999998 66654421
Q ss_pred ----------c-----eEEEEEeccCCCChhhhh
Q 048796 536 ----------Q-----ERLLLADYIQGDSLALHL 554 (555)
Q Consensus 536 ----------~-----~~~lv~e~~~~GsL~~~l 554 (555)
. ..++||||+ +|+|.+++
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l 190 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFG 190 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHH
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHH
Confidence 0 178999999 68999876
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=98.80 E-value=1e-08 Score=102.44 Aligned_cols=81 Identities=22% Similarity=0.290 Sum_probs=64.8
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHc--CCCCcceeeeEEEEcCCC--ceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGS--MRHPNIVPLRAYYWGPRE--QERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~--l~H~niv~l~g~~~~~~~--~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .|+.||||.+.... ...+..|.+++.. ++||||+++++++..... ...++||||+
T Consensus 42 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 117 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH 117 (337)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCC
T ss_pred EeEeecCCCeEEEEEEE-CCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEecc
Confidence 67999999999999998 48999999985432 3445556666555 499999999999986621 2389999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 118 ~~g~L~~~l 126 (337)
T 3mdy_A 118 ENGSLYDYL 126 (337)
T ss_dssp TTCBHHHHH
T ss_pred CCCcHHHHh
Confidence 999999876
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=9e-09 Score=112.50 Aligned_cols=82 Identities=15% Similarity=0.205 Sum_probs=69.2
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|++. .+..||||.+.... ....+.|.+|+.++++++||||+++++++.. +. .++||||
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~--~~lv~E~ 471 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NP--VWIIMEL 471 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS--CEEEEEC
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cc--eEEEEEc
Confidence 678999999999999872 25679999986543 3345789999999999999999999999853 44 8999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 472 ~~~g~L~~~l 481 (656)
T 2j0j_A 472 CTLGELRSFL 481 (656)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999999876
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.79 E-value=7.2e-09 Score=103.42 Aligned_cols=82 Identities=23% Similarity=0.316 Sum_probs=68.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCE----EEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHM----LTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~----vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.++||+|+||.||+|+. .+++. ||+|.+... .....+.+.+|+.++..++||||++++++|... . .++|+|
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~--~~~v~~ 96 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T--VQLITQ 96 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-S--EEEEEC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-C--ceEEEE
Confidence 67899999999999996 45543 577777543 334568899999999999999999999999864 3 789999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 97 ~~~~g~L~~~l 107 (327)
T 3lzb_A 97 LMPFGCLLDYV 107 (327)
T ss_dssp CCSSCBHHHHH
T ss_pred ecCCCcHHHHH
Confidence 99999998876
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=6.8e-09 Score=104.57 Aligned_cols=84 Identities=18% Similarity=0.242 Sum_probs=68.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC---CceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR---EQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ......+.+|+.+++.++||||+++++++.... ....++|+||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~ 95 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQEL 95 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEec
Confidence 67899999999999997 578999999996533 234567889999999999999999999886531 1238999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
++ |+|.+++
T Consensus 96 ~~-~~L~~~~ 104 (353)
T 2b9h_A 96 MQ-TDLHRVI 104 (353)
T ss_dssp CS-EEHHHHH
T ss_pred cC-ccHHHHH
Confidence 98 5887764
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=98.78 E-value=5.7e-09 Score=106.63 Aligned_cols=59 Identities=22% Similarity=0.344 Sum_probs=49.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWG 532 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~ 532 (555)
.+.||+|+||.||+|+. .+|+.||||++..... ...+|+.+++.++||||+++++++..
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~ 71 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYT 71 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeee
Confidence 67999999999999997 6899999999864322 23479999999999999999999854
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=8.6e-09 Score=102.72 Aligned_cols=82 Identities=18% Similarity=0.312 Sum_probs=66.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHH-HHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVK-KIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~-~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|.. .+|+.||||.+.... .....++..|+. +++.++||||+++++++...+. .++||||++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~--~~lv~e~~~ 104 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGD--CWICMELMS 104 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSE--EEEEECCCS
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCc--eEEEEeecC
Confidence 78999999999999998 579999999996543 233456666666 7788899999999999988766 999999998
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+ +|.+++
T Consensus 105 ~-~l~~~~ 111 (327)
T 3aln_A 105 T-SFDKFY 111 (327)
T ss_dssp E-EHHHHH
T ss_pred C-ChHHHH
Confidence 6 666543
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=98.78 E-value=5.4e-09 Score=102.17 Aligned_cols=82 Identities=26% Similarity=0.369 Sum_probs=61.8
Q ss_pred CCeeecCCceEEEEEEe--CCCC--EEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL--DSGH--MLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--~~g~--~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|++ .++. .||||.++... ....+.|.+|+.++.+++||||+++++++... . .++|+
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~--~~~v~ 99 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-P--MKMVT 99 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-S--CEEEE
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC-C--ceeeE
Confidence 67899999999999986 2333 68999886532 23457899999999999999999999998764 3 79999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 100 e~~~~~~L~~~l 111 (291)
T 1u46_A 100 ELAPLGSLLDRL 111 (291)
T ss_dssp ECCTTCBHHHHH
T ss_pred ecccCCCHHHHH
Confidence 999999998875
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=98.78 E-value=8.5e-09 Score=104.52 Aligned_cols=84 Identities=17% Similarity=0.181 Sum_probs=69.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC---CceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR---EQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++.+++||||+++++++.... ....++|+||
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~ 111 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEEC
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcc
Confidence 67899999999999997 578899999997533 233577999999999999999999999986543 1238999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++ +|.+++
T Consensus 112 ~~~-~L~~~l 120 (364)
T 3qyz_A 112 MET-DLYKLL 120 (364)
T ss_dssp CSE-EHHHHH
T ss_pred cCc-CHHHHH
Confidence 984 887764
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=98.78 E-value=1.3e-08 Score=103.59 Aligned_cols=84 Identities=17% Similarity=0.219 Sum_probs=68.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 542 (555)
.+.||+|+||.||+|.. .+|+.||||.+... .....+.+.+|+.+++.++||||+++++++...+. ...++||
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~ 109 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 109 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEE
Confidence 67899999999999987 57899999999653 23345778999999999999999999999976541 1389999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++ +|.+++
T Consensus 110 e~~~~-~l~~~~ 120 (371)
T 2xrw_A 110 ELMDA-NLCQVI 120 (371)
T ss_dssp ECCSE-EHHHHH
T ss_pred EcCCC-CHHHHH
Confidence 99985 676654
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.77 E-value=3.5e-09 Score=116.62 Aligned_cols=85 Identities=18% Similarity=0.223 Sum_probs=68.6
Q ss_pred CCeeecCCceEEEEEEeC--CCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCc---eEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATLD--SGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ---ERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~--~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~---~~~lv~e 543 (555)
.++||+|+||.||+|+.. +|+.||||.+... .....+.|.+|+.++.+++||||+++++++...+.. ..|+|||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E 164 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVME 164 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEE
Confidence 678999999999999973 6899999998643 333456789999999999999999999998754321 1599999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 165 ~~~g~~L~~~~ 175 (681)
T 2pzi_A 165 YVGGQSLKRSK 175 (681)
T ss_dssp CCCCEECC---
T ss_pred eCCCCcHHHHH
Confidence 99999998764
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=98.75 E-value=5.3e-09 Score=114.74 Aligned_cols=83 Identities=18% Similarity=0.308 Sum_probs=70.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|+. .+++.||||.++... ....+.+..|..++..+ +||+|+.+++++.+.+. .|+||||
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~--~~lV~E~ 423 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR--LYFVMEY 423 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE--EEEEEEC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE--EEEEEeC
Confidence 67899999999999997 578899999996432 22356788899999987 79999999999887766 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.++|
T Consensus 424 ~~gg~L~~~l 433 (674)
T 3pfq_A 424 VNGGDLMYHI 433 (674)
T ss_dssp CCSCBHHHHH
T ss_pred cCCCcHHHHH
Confidence 9999999876
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=98.75 E-value=1.4e-08 Score=103.24 Aligned_cols=84 Identities=19% Similarity=0.253 Sum_probs=69.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCc----eEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ----ERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~----~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.+++.++||||+++++++...+.. +.++||
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 126 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEE
Confidence 67899999999999997 579999999996532 23357889999999999999999999999765540 139999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||++ |+|.+++
T Consensus 127 e~~~-~~l~~~~ 137 (371)
T 4exu_A 127 PFMQ-TDLQKIM 137 (371)
T ss_dssp ECCC-EEHHHHT
T ss_pred cccc-ccHHHHh
Confidence 9998 5787654
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.1e-07 Score=97.46 Aligned_cols=192 Identities=10% Similarity=0.075 Sum_probs=107.4
Q ss_pred CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCc--------------------
Q 048796 29 KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS-------------------- 88 (555)
Q Consensus 29 ~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-------------------- 88 (555)
.+|+.+.+.++ +..+....|..+.+|+.+++..| ++.+...+|.++..|+.+.+..+.
T Consensus 162 ~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ip~ 239 (394)
T 4fs7_A 162 ESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIPD 239 (394)
T ss_dssp TTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEEEECT
T ss_pred CCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCceEEECC
Confidence 34555555433 22233444555555555555444 332333344444444444443332
Q ss_pred -CCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccC
Q 048796 89 -VTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSG 167 (555)
Q Consensus 89 -l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~ 167 (555)
++......+..+..|+.+.+..+... .....|..+..++.+.+..+.+. .. .+..+.+|+.+.+..
T Consensus 240 ~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~---------~F~~~~~L~~i~l~~ 306 (394)
T 4fs7_A 240 SFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EK---------TFYGCSSLTEVKLLD 306 (394)
T ss_dssp TCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TT---------TTTTCTTCCEEEECT
T ss_pred CceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cc---------ccccccccccccccc
Confidence 22223334555555555555544332 33444555555555555443321 11 123447888888875
Q ss_pred CcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccC
Q 048796 168 NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYN 238 (555)
Q Consensus 168 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N 238 (555)
+ ++.+...+|.++.+|+.++|.++ ++.....+|.++.+|+.+++..| ++......|. .+|+.+++..+
T Consensus 307 ~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 307 S-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred c-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 5 66566678888888999888754 66566678888888999988776 6644444554 67888887654
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=1.7e-09 Score=116.87 Aligned_cols=83 Identities=25% Similarity=0.399 Sum_probs=71.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEc------CCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWG------PREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~------~~~~~~~lv 541 (555)
.+.||+|+||.||+|.. .+|+.||||.+... .....+.|.+|+.++.+++||||+++++++.. .+. .++|
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~--~~LV 96 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL--PLLA 96 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS--CCCE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe--EEEE
Confidence 78999999999999997 57899999998654 33446779999999999999999999998754 334 7999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 97 mEy~~ggsL~~~L 109 (676)
T 3qa8_A 97 MEYCEGGDLRKYL 109 (676)
T ss_dssp EECCSSCBHHHHH
T ss_pred EEeCCCCCHHHHH
Confidence 9999999998876
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.6e-08 Score=102.04 Aligned_cols=84 Identities=19% Similarity=0.253 Sum_probs=69.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.+++.++||||+++++++..... ...++||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 108 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEe
Confidence 67899999999999997 579999999996532 2335778999999999999999999999976543 1249999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||++ |+|.+++
T Consensus 109 e~~~-~~l~~~~ 119 (353)
T 3coi_A 109 PFMQ-TDLQKIM 119 (353)
T ss_dssp ECCS-EEGGGTT
T ss_pred cccc-CCHHHHh
Confidence 9998 5887654
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=98.74 E-value=6e-09 Score=105.78 Aligned_cols=84 Identities=21% Similarity=0.297 Sum_probs=63.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC----CceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR----EQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~----~~~~~lv~ 542 (555)
.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++.... ....++|+
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~ 113 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEe
Confidence 67899999999999986 67999999999653 2334677899999999999999999999986541 12379999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+ +|+|.+++
T Consensus 114 e~~-~~~L~~~~ 124 (367)
T 2fst_X 114 HLM-GADLNNIV 124 (367)
T ss_dssp ECC-CEECC---
T ss_pred ccc-CCCHHHHH
Confidence 999 67887765
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=8.5e-09 Score=103.91 Aligned_cols=83 Identities=19% Similarity=0.264 Sum_probs=67.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC------CceEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR------EQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~------~~~~~l 540 (555)
.+.||+|+||.||+|+. .+|+.||||++..... .....+.+|+.++..++||||+++++++.... ....++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 101 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEE
Confidence 67899999999999997 6899999999854332 23567889999999999999999999987632 123899
Q ss_pred EEeccCCCChhhh
Q 048796 541 LADYIQGDSLALH 553 (555)
Q Consensus 541 v~e~~~~GsL~~~ 553 (555)
||||+++ +|.+.
T Consensus 102 v~e~~~~-~l~~~ 113 (351)
T 3mi9_A 102 VFDFCEH-DLAGL 113 (351)
T ss_dssp EEECCSE-EHHHH
T ss_pred EEeccCC-CHHHH
Confidence 9999986 56554
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=1.2e-08 Score=106.09 Aligned_cols=79 Identities=19% Similarity=0.161 Sum_probs=66.4
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.++||+|+||+||.+...+|+.||||++... ..+.+.+|+.++.++ +||||+++++++...+. .++|||||+ |
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~--~~lv~E~~~-g 93 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRF--LYIALELCN-L 93 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSE--EEEEECCCS-E
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCe--EEEEEecCC-C
Confidence 5689999999997666568999999998653 235678999999876 89999999999987766 999999996 6
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 94 sL~~~l 99 (434)
T 2rio_A 94 NLQDLV 99 (434)
T ss_dssp EHHHHH
T ss_pred CHHHHH
Confidence 998876
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.72 E-value=1.3e-08 Score=101.80 Aligned_cols=81 Identities=27% Similarity=0.358 Sum_probs=62.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHH--HHcCCCCcceeeeEEEEc---CCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKK--IGSMRHPNIVPLRAYYWG---PREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~--l~~l~H~niv~l~g~~~~---~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+. +++.||||.+.... ...+..|..+ +..++||||+++++++.. .+....++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 93 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY 93 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEec
Confidence 67899999999999988 78999999986433 3444444444 456899999999986532 222236899999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 94 ~~~g~L~~~l 103 (336)
T 3g2f_A 94 YPNGSLXKYL 103 (336)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999999876
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.72 E-value=3.3e-09 Score=104.99 Aligned_cols=83 Identities=16% Similarity=0.256 Sum_probs=64.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh------cHHHHHHHHHHHHcC----CCCcceeeeEEEEcCCCceE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR------HKKEFAKEVKKIGSM----RHPNIVPLRAYYWGPREQER 538 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~------~~~~~~~ei~~l~~l----~H~niv~l~g~~~~~~~~~~ 538 (555)
.+.||+|+||.||+|+. .+|+.||||.+...... ....+.+|+.++.++ +||||+++++++...+. .
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~--~ 113 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEG--F 113 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-------C
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCe--E
Confidence 67899999999999987 67899999999654321 223466788888888 89999999999987766 8
Q ss_pred EEEEec-cCCCChhhhh
Q 048796 539 LLLADY-IQGDSLALHL 554 (555)
Q Consensus 539 ~lv~e~-~~~GsL~~~l 554 (555)
++|+|| +++|+|.+++
T Consensus 114 ~~v~e~~~~~~~L~~~l 130 (312)
T 2iwi_A 114 MLVLERPLPAQDLFDYI 130 (312)
T ss_dssp EEEEECCSSEEEHHHHH
T ss_pred EEEEEecCCCCCHHHHH
Confidence 999999 8899998875
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.71 E-value=2.8e-09 Score=105.75 Aligned_cols=82 Identities=18% Similarity=0.359 Sum_probs=69.7
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+... .+|+|.+.... ....+.|.+|+.++.+++||||+++++++...+. .++|+||+++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--~~iv~e~~~~ 113 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH--LAIITSLCKG 113 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC--EEEECBCCCS
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc--eEEEeecccC
Confidence 7899999999999999843 49999986432 2234568889999999999999999999998777 9999999999
Q ss_pred CChhhhhC
Q 048796 548 DSLALHLY 555 (555)
Q Consensus 548 GsL~~~l~ 555 (555)
|+|.+++.
T Consensus 114 ~~L~~~l~ 121 (319)
T 2y4i_B 114 RTLYSVVR 121 (319)
T ss_dssp EEHHHHTT
T ss_pred CcHHHHHH
Confidence 99998763
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=1.5e-08 Score=108.18 Aligned_cols=83 Identities=11% Similarity=0.123 Sum_probs=61.3
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh--------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV--------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~--------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.++||+|+||.||+|.+ .+..+++|+...... ...+.|.+|+.++++++||||+++..++...+. .++|
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~--~~lV 417 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDN--KRIM 417 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTT--TEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCc--cEEE
Confidence 57899999999999976 678899998643211 113558999999999999999977777666666 8999
Q ss_pred EeccCCCChhhhhC
Q 048796 542 ADYIQGDSLALHLY 555 (555)
Q Consensus 542 ~e~~~~GsL~~~l~ 555 (555)
|||+++|+|.++++
T Consensus 418 mE~~~ggsL~~~l~ 431 (540)
T 3en9_A 418 MSYINGKLAKDVIE 431 (540)
T ss_dssp EECCCSEEHHHHST
T ss_pred EECCCCCCHHHHHH
Confidence 99999999998864
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=1.4e-08 Score=99.59 Aligned_cols=80 Identities=16% Similarity=0.216 Sum_probs=69.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ..+.+.+|+..+..+ +|+|++++++++..... .++||||+ +
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~--~~lv~e~~-~ 89 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH--NVLVIDLL-G 89 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTE--EEEEEECC-C
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCce--eEEEEEec-C
Confidence 67899999999999996 689999999986432 234688899999999 79999999999987766 99999999 9
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 90 ~~L~~~l 96 (298)
T 1csn_A 90 PSLEDLL 96 (298)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 9999876
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.70 E-value=5.6e-09 Score=105.32 Aligned_cols=77 Identities=19% Similarity=0.205 Sum_probs=63.5
Q ss_pred CCeeecCCceEEEEEEeC---------CCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCccee---------------
Q 048796 470 AEVLGRSSHGTLYKATLD---------SGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVP--------------- 525 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~---------~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~--------------- 525 (555)
.+.||+|+||.||+|+.. +++.||||.+... +.+.+|+.++.+++||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence 779999999999999974 3789999998653 45789999999999999998
Q ss_pred eeEEEEc-CCCceEEEEEeccCCCChhhhh
Q 048796 526 LRAYYWG-PREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 526 l~g~~~~-~~~~~~~lv~e~~~~GsL~~~l 554 (555)
+++++.. ... .++||||+ +|+|.+++
T Consensus 122 ~~~~~~~~~~~--~~lv~e~~-~~~L~~~l 148 (352)
T 2jii_A 122 CMGFGVHQDKY--RFLVLPSL-GRSLQSAL 148 (352)
T ss_dssp CCEEEEETTTE--EEEEEECC-CEEHHHHH
T ss_pred hhhccccCCcE--EEEEecCC-CcCHHHHH
Confidence 6777765 344 89999999 99999876
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.69 E-value=9.2e-09 Score=103.46 Aligned_cols=82 Identities=16% Similarity=0.060 Sum_probs=61.6
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccCChh-----------cHHHHHHHHHHHHcCCCCcceeeeEEEEc--
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVGLVR-----------HKKEFAKEVKKIGSMRHPNIVPLRAYYWG-- 532 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~~~~-----------~~~~~~~ei~~l~~l~H~niv~l~g~~~~-- 532 (555)
.+.||+|+||.||+|+.. .+..+|||.+...... ..+.+.+|+..+..++||||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~ 121 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEF 121 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEES
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccccc
Confidence 779999999999999973 6788999998654321 12457788899999999999999999876
Q ss_pred --CCCceEEEEEeccCCCChhhhh
Q 048796 533 --PREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 533 --~~~~~~~lv~e~~~~GsL~~~l 554 (555)
... .++||||+ +|+|.+++
T Consensus 122 ~~~~~--~~lv~e~~-~~~L~~~l 142 (345)
T 2v62_A 122 KGRSY--RFMVMERL-GIDLQKIS 142 (345)
T ss_dssp SSCEE--EEEEEECE-EEEHHHHC
T ss_pred CCCcE--EEEEEecc-CCCHHHHH
Confidence 344 89999999 99999876
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.69 E-value=1.5e-08 Score=100.14 Aligned_cols=84 Identities=27% Similarity=0.351 Sum_probs=65.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-----hhcHHHHHHHHHHHHcC---CCCcceeeeEEEEcCCCc---e
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-----VRHKKEFAKEVKKIGSM---RHPNIVPLRAYYWGPREQ---E 537 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-----~~~~~~~~~ei~~l~~l---~H~niv~l~g~~~~~~~~---~ 537 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ......+.+|+.+++++ +||||++++++|...... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 67899999999999996 679999999985322 11235677788777666 499999999999765421 2
Q ss_pred EEEEEeccCCCChhhhh
Q 048796 538 RLLLADYIQGDSLALHL 554 (555)
Q Consensus 538 ~~lv~e~~~~GsL~~~l 554 (555)
.++||||++ |+|.+++
T Consensus 94 ~~lv~e~~~-~~L~~~~ 109 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYL 109 (308)
T ss_dssp EEEEEECCC-CBHHHHH
T ss_pred EEEEehhhh-cCHHHHH
Confidence 789999998 5888765
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=3.4e-08 Score=98.89 Aligned_cols=81 Identities=19% Similarity=0.231 Sum_probs=61.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC--CCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP--REQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~--~~~~~~lv~e~~~ 546 (555)
.++||+|+||.||+|+. .+|+.||||.+.... +........+..++||||+++++++... +....++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 35799999999999998 579999999986532 1122222346678999999999998652 1223799999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 110 gg~L~~~l 117 (336)
T 3fhr_A 110 GGELFSRI 117 (336)
T ss_dssp TEEHHHHH
T ss_pred CCCHHHHH
Confidence 99998876
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=3.3e-08 Score=97.79 Aligned_cols=82 Identities=10% Similarity=0.227 Sum_probs=70.4
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCC--CCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMR--HPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~--H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++..+++.||||.+... .....+.+.+|+.++.+++ |+||+++++++...+. .++||| +
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~--~~lv~e-~ 109 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY--IYMVME-C 109 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE--EEEEEC-C
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE--EEEEEe-c
Confidence 6789999999999999878999999998643 2334678999999999997 5999999999988776 999999 6
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
.+|+|.+++
T Consensus 110 ~~~~L~~~l 118 (313)
T 3cek_A 110 GNIDLNSWL 118 (313)
T ss_dssp CSEEHHHHH
T ss_pred CCCcHHHHH
Confidence 678998875
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=98.67 E-value=1.4e-08 Score=102.91 Aligned_cols=84 Identities=15% Similarity=0.147 Sum_probs=63.9
Q ss_pred CCeeecCCceEEEEEEeCC------CCEEEEEEeccCChh-----------cHHHHHHHHHHHHcCCCCcceeeeEEEEc
Q 048796 470 AEVLGRSSHGTLYKATLDS------GHMLTVKWLRVGLVR-----------HKKEFAKEVKKIGSMRHPNIVPLRAYYWG 532 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~------g~~vavK~l~~~~~~-----------~~~~~~~ei~~l~~l~H~niv~l~g~~~~ 532 (555)
.+.||+|+||.||+|++.. ++.||||.+...... ....+..|+..+..++||||+++++++..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 119 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeee
Confidence 7799999999999998743 478999998654321 12335566777888999999999999875
Q ss_pred CCC--ceEEEEEeccCCCChhhhh
Q 048796 533 PRE--QERLLLADYIQGDSLALHL 554 (555)
Q Consensus 533 ~~~--~~~~lv~e~~~~GsL~~~l 554 (555)
... ...++||||+ +|+|.+++
T Consensus 120 ~~~~~~~~~lv~e~~-g~~L~~~~ 142 (364)
T 3op5_A 120 DKNGKSYRFMIMDRF-GSDLQKIY 142 (364)
T ss_dssp EETTEEEEEEEEECE-EEEHHHHH
T ss_pred ccCCcceEEEEEeCC-CCCHHHHH
Confidence 321 2379999999 99998876
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.65 E-value=1.8e-08 Score=104.60 Aligned_cols=79 Identities=16% Similarity=0.190 Sum_probs=64.6
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.++||+|+||.||.....+|+.||||++..... ..+.+|+.++..+ +|||||++++++..... .++|||||+ |
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~--~~lv~E~~~-g 102 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQF--QYIAIELCA-A 102 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTE--EEEEEECCS-E
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCE--EEEEEECCC-C
Confidence 679999999986544445899999999965432 2356899999999 79999999999987776 999999997 5
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 103 ~L~~~l 108 (432)
T 3p23_A 103 TLQEYV 108 (432)
T ss_dssp EHHHHH
T ss_pred CHHHHH
Confidence 888775
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=98.65 E-value=1.7e-08 Score=100.45 Aligned_cols=84 Identities=24% Similarity=0.332 Sum_probs=63.7
Q ss_pred CCeeecCCceEEEEEEe--CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcC---CCCcceeeeEEEEc---CCCceEE
Q 048796 470 AEVLGRSSHGTLYKATL--DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSM---RHPNIVPLRAYYWG---PREQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l---~H~niv~l~g~~~~---~~~~~~~ 539 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... .....+.+|+.+++.+ +||||++++++|.. ......+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 67899999999999997 4688999999854321 2234566777766655 89999999999862 1222389
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+||||++ |+|.+++
T Consensus 96 lv~e~~~-~~L~~~l 109 (326)
T 1blx_A 96 LVFEHVD-QDLTTYL 109 (326)
T ss_dssp EEEECCS-CBHHHHH
T ss_pred EEEecCC-CCHHHHH
Confidence 9999998 5898765
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.63 E-value=4.7e-08 Score=96.76 Aligned_cols=79 Identities=18% Similarity=0.280 Sum_probs=56.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hc-HHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RH-KKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~-~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... .. .+.+..+..++..++||||+++++++...+. .++||||+
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~--~~lv~e~~- 106 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTD--VFIAMELM- 106 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--EEEEECCC-
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCc--EEEEEecc-
Confidence 67899999999999998 5799999999965432 22 2334455567888999999999999988776 99999999
Q ss_pred CCChh
Q 048796 547 GDSLA 551 (555)
Q Consensus 547 ~GsL~ 551 (555)
++.+.
T Consensus 107 ~~~~~ 111 (318)
T 2dyl_A 107 GTCAE 111 (318)
T ss_dssp SEEHH
T ss_pred CCcHH
Confidence 33443
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=5.6e-08 Score=98.70 Aligned_cols=83 Identities=13% Similarity=0.103 Sum_probs=55.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHH---HHHHcCCCCcceeee-------EEEEcCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEV---KKIGSMRHPNIVPLR-------AYYWGPRE 535 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei---~~l~~l~H~niv~l~-------g~~~~~~~ 535 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+ ..++. +||||++++ +++.....
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~ 145 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQ 145 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTS
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCC
Confidence 67899999999999997 5789999999976432 2355677784 55666 799988754 44432221
Q ss_pred ---------------ceEEEEEeccCCCChhhhh
Q 048796 536 ---------------QERLLLADYIQGDSLALHL 554 (555)
Q Consensus 536 ---------------~~~~lv~e~~~~GsL~~~l 554 (555)
...++|||||+ |+|.+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l 178 (371)
T 3q60_A 146 PPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLF 178 (371)
T ss_dssp CSSSBCSCC---CCEEEEEEEECCCS-EEHHHHH
T ss_pred CCeeeccCCcccceeeeEEEEecCCC-CCHHHHH
Confidence 23799999999 8999876
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=4.6e-08 Score=101.44 Aligned_cols=81 Identities=16% Similarity=0.225 Sum_probs=66.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC------CCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM------RHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l------~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.++||+|+||.||+|+. .+++.||||.+.... ...+.+.+|+.++..+ .|+||+++++++..... .++||
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~--~~lv~ 178 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH--ICMTF 178 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE--EEEEE
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe--EEEEE
Confidence 67899999999999987 568999999997542 2346677888887766 67799999999987776 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+. |+|.+++
T Consensus 179 e~~~-~~L~~~l 189 (429)
T 3kvw_A 179 ELLS-MNLYELI 189 (429)
T ss_dssp CCCC-CBHHHHH
T ss_pred eccC-CCHHHHH
Confidence 9997 5888765
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=3.1e-08 Score=101.31 Aligned_cols=83 Identities=13% Similarity=0.175 Sum_probs=65.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC--------CCcceeeeEEEEcC--CCceE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR--------HPNIVPLRAYYWGP--REQER 538 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~--------H~niv~l~g~~~~~--~~~~~ 538 (555)
.+.||+|+||.||+|+. .+++.||||.+... ....+.+.+|+.++..++ |+||+++++++... .....
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~ 120 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHI 120 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceE
Confidence 67899999999999986 67889999999753 234577899999999886 78899999998721 12238
Q ss_pred EEEEeccCCCChhhhh
Q 048796 539 LLLADYIQGDSLALHL 554 (555)
Q Consensus 539 ~lv~e~~~~GsL~~~l 554 (555)
++||||+ +|+|.+++
T Consensus 121 ~lv~e~~-~~~l~~~~ 135 (397)
T 1wak_A 121 CMVFEVL-GHHLLKWI 135 (397)
T ss_dssp EEEECCC-CCBHHHHH
T ss_pred EEEEecc-CccHHHHH
Confidence 9999999 55665543
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=98.60 E-value=7.5e-08 Score=99.53 Aligned_cols=78 Identities=28% Similarity=0.465 Sum_probs=61.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC----CCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP----REQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~----~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|+. .+|+.||||++..... .+.+|+.+++.++|||||+++++|... +....++||||
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 67899999999999998 5799999999864322 234799999999999999999988532 11126789999
Q ss_pred cCCCChhh
Q 048796 545 IQGDSLAL 552 (555)
Q Consensus 545 ~~~GsL~~ 552 (555)
+++ +|.+
T Consensus 135 ~~~-~l~~ 141 (420)
T 1j1b_A 135 VPE-TVYR 141 (420)
T ss_dssp CCE-EHHH
T ss_pred ccc-cHHH
Confidence 986 4544
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=98.58 E-value=7.9e-07 Score=90.97 Aligned_cols=220 Identities=12% Similarity=0.174 Sum_probs=105.4
Q ss_pred CCCEEECCCCcCCCCCCCCC---CCCCEEEcCCCc---CCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 9 TLSVLNLSSNSLSGTLPTSL---KSCVILDLSRNM---ISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~l---~~L~~L~L~~N~---l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
.|+.+.+..+ ++.+-..+| .+|+.+.+..|. ++.+...+|..+.+|+.+.+..+ ++.....+|..+.+|+.+
T Consensus 65 ~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i 142 (394)
T 4gt6_A 65 VLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTV 142 (394)
T ss_dssp CCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEE
T ss_pred cCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccc
Confidence 4777777644 443323333 456677776553 44444556666666666655544 333444455666666666
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCC----------------------CCchhhhCCCCCCeEEccCCcccc-
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKG----------------------PIPDNFFSSMALTNLNLSGNGFSG- 139 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~----------------------~~~~~~~~~~~L~~L~Ls~N~l~~- 139 (555)
.+..+ +.......|..+.+|+.+.+..+ ++. .....|..+.+|.......+....
T Consensus 143 ~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~~~~~~~~~ 220 (394)
T 4gt6_A 143 TIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTGTALTQIHIPAKVTRIGTNAFSECFALSTITSDSESYPAI 220 (394)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCCCSEEEECTTCCEECTTTTTTCTTCCEEEECCSSSCBS
T ss_pred cccce-eeeecccceecccccccccccce-eeEeccccccccceeEEEECCcccccccchhhhccccceecccccccccc
Confidence 66533 22233344555555555555433 211 112223333333333222211100
Q ss_pred ---------------------------cCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccc
Q 048796 140 ---------------------------AIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANN 192 (555)
Q Consensus 140 ---------------------------~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 192 (555)
.+|..+... .-..+..+..|+.+.+..+..+ ....+|.++..|+.+.+. +
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i-~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~ 297 (394)
T 4gt6_A 221 DNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARI-ETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-S 297 (394)
T ss_dssp SSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEE-CTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-T
T ss_pred cceeecccccccccccccccccccceEEcCCcceEc-ccceeeecccccEEecccccce-ecCcccccccccccccCC-C
Confidence 011111000 1113445566777776554332 444566666666666664 3
Q ss_pred cccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEec
Q 048796 193 HLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVS 236 (555)
Q Consensus 193 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls 236 (555)
.++.....+|.++.+|+.++|..+ ++......|. .+|+.+.|.
T Consensus 298 ~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 298 RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEEC
Confidence 344444556666666666666543 4423333333 456666664
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.58 E-value=3.7e-08 Score=99.48 Aligned_cols=78 Identities=18% Similarity=0.348 Sum_probs=52.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC-----ceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE-----QERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~-----~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .+|+.||||++..... ....+.+|+..++.++||||+++++++...+. ...++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEee
Confidence 78999999999999997 5799999998854322 23456778888999999999999999864321 12689999
Q ss_pred ccCCC
Q 048796 544 YIQGD 548 (555)
Q Consensus 544 ~~~~G 548 (555)
|++++
T Consensus 107 ~~~~~ 111 (360)
T 3e3p_A 107 YVPDT 111 (360)
T ss_dssp CCSCB
T ss_pred ccccc
Confidence 99975
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=98.58 E-value=7.8e-07 Score=91.02 Aligned_cols=108 Identities=14% Similarity=0.178 Sum_probs=65.5
Q ss_pred hhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCC
Q 048796 119 DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKM 198 (555)
Q Consensus 119 ~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 198 (555)
.+|..+..|+.+.+..+... .....|..+ ..|+.+.+. +.++.+...+|.+|.+|+.++|..+ ++...
T Consensus 259 ~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c---------~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~ 326 (394)
T 4gt6_A 259 HAFDSCAYLASVKMPDSVVS-IGTGAFMNC---------PALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQIL 326 (394)
T ss_dssp TTTTTCSSCCEEECCTTCCE-ECTTTTTTC---------TTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEEC
T ss_pred ceeeecccccEEecccccce-ecCcccccc---------cccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEeh
Confidence 35666777777777655332 223333333 677777775 4455555667777777777777654 55455
Q ss_pred chhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCC
Q 048796 199 PSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYND 239 (555)
Q Consensus 199 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~ 239 (555)
..+|.++.+|+.+.+..+ ++......|. .+|+.+++.+|.
T Consensus 327 ~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 327 DDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred HhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 567777777777777544 5533334444 567777777664
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=98.57 E-value=7e-08 Score=94.39 Aligned_cols=81 Identities=19% Similarity=0.229 Sum_probs=66.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... .+.+.+|+.++..++|+++++.+.++...+. ..++||||+ +|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv~e~~-~~ 89 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMVMELL-GP 89 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEEEEECC-CC
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCC-ceEEEEEec-CC
Confidence 67899999999999996 6899999999865432 3468899999999999998887777654332 389999999 89
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 90 ~L~~~~ 95 (296)
T 3uzp_A 90 SLEDLF 95 (296)
T ss_dssp BHHHHH
T ss_pred CHHHHH
Confidence 998875
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=4.1e-08 Score=97.91 Aligned_cols=81 Identities=14% Similarity=0.199 Sum_probs=67.8
Q ss_pred CCeeecCCceEEEEEEe--CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCc------ceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL--DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPN------IVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~n------iv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|+. .+|+.||||.++... ...+.+.+|+.++..++|++ ++++++++...+. .++|
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~--~~lv 95 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH--ICIV 95 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE--EEEE
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc--EEEE
Confidence 67899999999999986 468899999996532 34567889999988887654 9999999987776 9999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+ +|+|.+++
T Consensus 96 ~e~~-~~~l~~~l 107 (339)
T 1z57_A 96 FELL-GLSTYDFI 107 (339)
T ss_dssp EECC-CCBHHHHH
T ss_pred EcCC-CCCHHHHH
Confidence 9999 88998775
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.55 E-value=6.1e-09 Score=94.82 Aligned_cols=41 Identities=17% Similarity=0.076 Sum_probs=18.6
Q ss_pred cCccccceeec--ccccccCC----CchhccCCCCCCEEeCCCCcCC
Q 048796 179 GNMGRLRLLNL--ANNHLSGK----MPSELSKLGALEYLDLSGNQFK 219 (555)
Q Consensus 179 ~~l~~L~~L~L--~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 219 (555)
...++|+.|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 118 ~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 118 QSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 33444555555 44555432 1222333455555555555543
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=98.52 E-value=2.7e-08 Score=98.91 Aligned_cols=83 Identities=13% Similarity=0.259 Sum_probs=68.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh------cHHHHHHHHHHHHcCC--CCcceeeeEEEEcCCCceEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR------HKKEFAKEVKKIGSMR--HPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~------~~~~~~~ei~~l~~l~--H~niv~l~g~~~~~~~~~~~l 540 (555)
.+.||+|+||.||+|+. .+|+.||||.+...... ..+.+.+|+.++.+++ |+||+++++++...+. .++
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~--~~l 125 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS--FVL 125 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE--EEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc--EEE
Confidence 67899999999999986 67899999998643221 2245778999999986 5999999999998776 999
Q ss_pred EEeccCC-CChhhhh
Q 048796 541 LADYIQG-DSLALHL 554 (555)
Q Consensus 541 v~e~~~~-GsL~~~l 554 (555)
|+||+.+ |+|.+++
T Consensus 126 v~e~~~~~~~L~~~l 140 (320)
T 3a99_A 126 ILERPEPVQDLFDFI 140 (320)
T ss_dssp EEECCSSEEEHHHHH
T ss_pred EEEcCCCCccHHHHH
Confidence 9999986 8888765
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.51 E-value=2.1e-08 Score=91.18 Aligned_cols=118 Identities=16% Similarity=0.259 Sum_probs=59.3
Q ss_pred ccCCCCccEEEccCC-cCCC----CCCccccCCCCccEEEeeCCcCCCC----CchhccCCCCccEEEcCCCcCCCC---
Q 048796 49 QNWEANLEILDLSSN-KLSG----SLPNLTSQFDRLSTFNIRNNSVTGT----LPSLLEISPRLVTLDVSSNQLKGP--- 116 (555)
Q Consensus 49 ~~~~~~L~~L~Ls~N-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~--- 116 (555)
+...++|++|+|++| .|.. .+...+...++|++|+|++|.|... +...+...++|++|+|++|.|+..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 334445666666665 5542 1223344455566666666665532 223344445666666666666522
Q ss_pred -CchhhhCCCCCCeEEc--cCCcccccCCcCccccccccccCCCCCcCEEEccCCcCC
Q 048796 117 -IPDNFFSSMALTNLNL--SGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT 171 (555)
Q Consensus 117 -~~~~~~~~~~L~~L~L--s~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~ 171 (555)
+...+.....|+.|+| ++|.|.......+... +...++|++|+|++|.+.
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~-----L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANM-----LEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHH-----HHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHH-----HHhCCCcCEEeccCCCCC
Confidence 2334455556666666 5566653322111111 222356667777766664
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=98.51 E-value=8.5e-08 Score=98.24 Aligned_cols=77 Identities=21% Similarity=0.398 Sum_probs=60.2
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~e~~ 545 (555)
.++||+|+||.||+|+...+..+|+|++..... ...+|+.+++.++||||+++++++..... ...++||||+
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 679999999999999986666799998854322 12369999999999999999999854321 1267999999
Q ss_pred CCCCh
Q 048796 546 QGDSL 550 (555)
Q Consensus 546 ~~GsL 550 (555)
+++.+
T Consensus 121 ~~~l~ 125 (394)
T 4e7w_A 121 PETVY 125 (394)
T ss_dssp SEEHH
T ss_pred CccHH
Confidence 97533
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=98.49 E-value=5.5e-08 Score=98.61 Aligned_cols=83 Identities=14% Similarity=0.174 Sum_probs=68.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-----------CCcceeeeEEEEcCC--C
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-----------HPNIVPLRAYYWGPR--E 535 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-----------H~niv~l~g~~~~~~--~ 535 (555)
.+.||+|+||.||+|+. .+++.||||.+.... ...+.+.+|+.++.+++ |+||+++++++...+ .
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 102 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNG 102 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCC
Confidence 67899999999999997 678999999997432 34567889999988876 899999999987543 1
Q ss_pred ceEEEEEeccCCCChhhhh
Q 048796 536 QERLLLADYIQGDSLALHL 554 (555)
Q Consensus 536 ~~~~lv~e~~~~GsL~~~l 554 (555)
...++||||+ +|+|.+++
T Consensus 103 ~~~~lv~e~~-~~~L~~~~ 120 (373)
T 1q8y_A 103 VHVVMVFEVL-GENLLALI 120 (373)
T ss_dssp EEEEEEECCC-CEEHHHHH
T ss_pred ceEEEEEecC-CCCHHHHH
Confidence 1389999999 88998765
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=1.6e-07 Score=91.56 Aligned_cols=77 Identities=13% Similarity=0.225 Sum_probs=60.8
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh------------------hcHHHHHHHHHHHHcCCCCcceeeeEEEE
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV------------------RHKKEFAKEVKKIGSMRHPNIVPLRAYYW 531 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~------------------~~~~~~~~ei~~l~~l~H~niv~l~g~~~ 531 (555)
.+.||+|+||.||+|+..+|+.||||.++.... .....+.+|+.++.+++| +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CCcCeEEe
Confidence 478999999999999997799999999964321 124578999999999994 55665544
Q ss_pred cCCCceEEEEEeccCCCChhh
Q 048796 532 GPREQERLLLADYIQGDSLAL 552 (555)
Q Consensus 532 ~~~~~~~~lv~e~~~~GsL~~ 552 (555)
. +. .++||||+++|+|.+
T Consensus 172 ~-~~--~~lvmE~~~g~~L~~ 189 (282)
T 1zar_A 172 W-EG--NAVLMELIDAKELYR 189 (282)
T ss_dssp E-ET--TEEEEECCCCEEGGG
T ss_pred c-cc--eEEEEEecCCCcHHH
Confidence 3 34 799999999999987
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=98.49 E-value=1.2e-07 Score=92.77 Aligned_cols=81 Identities=19% Similarity=0.229 Sum_probs=64.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+++.||||.+..... .+.+.+|+.++..++|++++..+++|...+. ..++||||+ +|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv~e~~-~~ 89 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMVMELL-GP 89 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEEEEECC-CC
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCC-ceEEEEEcc-CC
Confidence 67899999999999996 6789999998754322 2457889999999999998888877754332 389999999 99
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 90 ~L~~~~ 95 (296)
T 4hgt_A 90 SLEDLF 95 (296)
T ss_dssp BHHHHH
T ss_pred CHHHHH
Confidence 998875
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=98.47 E-value=2.6e-07 Score=97.00 Aligned_cols=80 Identities=20% Similarity=0.249 Sum_probs=63.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCccee-eeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVP-LRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~-l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.++||+|+||.||+|+. .+++.||||.+..... .+++.+|+.++..++|++.+. +..++...+. .++||||+ +
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~--~~lvme~~-g 86 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDY--NVLVMDLL-G 86 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTE--EEEEEECC-C
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCE--EEEEEECC-C
Confidence 78999999999999997 6799999998764332 245889999999998865554 4444455554 89999999 9
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 87 ~sL~~ll 93 (483)
T 3sv0_A 87 PSLEDLF 93 (483)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 9999876
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.47 E-value=9.2e-07 Score=90.48 Aligned_cols=193 Identities=13% Similarity=0.052 Sum_probs=134.2
Q ss_pred cCCCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCC----------------------ccEEE
Q 048796 5 INSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEAN----------------------LEILD 59 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~----------------------L~~L~ 59 (555)
.+|++|+.+.+..+..+ .-.. ...+|+.+++..| ++.+....|..... |+.+.
T Consensus 159 ~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ 236 (394)
T 4fs7_A 159 ATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNII 236 (394)
T ss_dssp TTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEEE
T ss_pred cccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCceEE
Confidence 46788999999765322 2222 3345677777655 44333444444444 44444
Q ss_pred ccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccc
Q 048796 60 LSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSG 139 (555)
Q Consensus 60 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~ 139 (555)
+..+ ++......|.++..|+.+.+..+... .....|..+..++.+.+..+.+. ...|..+.+|+.+.+..+ +..
T Consensus 237 ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~ 310 (394)
T 4fs7_A 237 IPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKF 310 (394)
T ss_dssp ECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCE
T ss_pred ECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cce
Confidence 4332 22234456778889999999887654 66678889999999988876543 346778899999999765 554
Q ss_pred cCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCC
Q 048796 140 AIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGN 216 (555)
Q Consensus 140 ~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 216 (555)
....+|..+ .+|+.++|..+ ++.+...+|.+|.+|+.+++..| ++.....+|.++++|+.+++..+
T Consensus 311 I~~~aF~~c---------~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 311 IGEEAFESC---------TSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp ECTTTTTTC---------TTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred echhhhcCC---------CCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 444555554 88999999754 77677788999999999999877 77667788999999999998654
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=2.1e-07 Score=94.91 Aligned_cols=81 Identities=20% Similarity=0.205 Sum_probs=66.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CC-----cceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HP-----NIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~-----niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+++.||||.++... ....++..|+.++..++ |+ +|+++++++...+. .++||
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~--~~lv~ 135 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH--LCLVF 135 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE--EEEEE
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc--eEEEE
Confidence 67899999999999997 578899999997432 23566788888888775 44 49999999987776 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||++ |+|.+++
T Consensus 136 e~~~-~~L~~~l 146 (382)
T 2vx3_A 136 EMLS-YNLYDLL 146 (382)
T ss_dssp ECCC-CBHHHHH
T ss_pred ecCC-CCHHHHH
Confidence 9996 4888775
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=98.39 E-value=1.1e-05 Score=81.79 Aligned_cols=77 Identities=14% Similarity=0.149 Sum_probs=35.0
Q ss_pred CCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEe
Q 048796 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNV 235 (555)
Q Consensus 158 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l 235 (555)
..|+.+.+..+ ++.+...+|.++.+|+.+.+..+ +.......|.++.+|+.+++.++.++......|. .+|+.++|
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 44555555443 33333444555555555555432 3323334445555555555555544433333333 34555544
Q ss_pred c
Q 048796 236 S 236 (555)
Q Consensus 236 s 236 (555)
.
T Consensus 318 p 318 (379)
T 4h09_A 318 P 318 (379)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=2.9e-07 Score=92.46 Aligned_cols=81 Identities=12% Similarity=0.183 Sum_probs=65.4
Q ss_pred CCeeecCCceEEEEEEe-CCC-CEEEEEEeccCChhcHHHHHHHHHHHHcCCCCc------ceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSG-HMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPN------IVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g-~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~n------iv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|+. .++ +.||||.++... ...+.+.+|+.++..++|++ ++.+.+++...+. .++|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~--~~lv 100 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH--MCIA 100 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE--EEEE
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe--EEEE
Confidence 67899999999999997 344 689999997532 34567889999999888766 8999999887776 9999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+ +|+|.+++
T Consensus 101 ~e~~-~~~l~~~l 112 (355)
T 2eu9_A 101 FELL-GKNTFEFL 112 (355)
T ss_dssp EECC-CCBHHHHH
T ss_pred Eecc-CCChHHHH
Confidence 9999 55666553
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.28 E-value=1.1e-07 Score=91.09 Aligned_cols=30 Identities=27% Similarity=0.275 Sum_probs=15.9
Q ss_pred ccceeecccccccCCCc-------hhccCCCCCCEEe
Q 048796 183 RLRLLNLANNHLSGKMP-------SELSKLGALEYLD 212 (555)
Q Consensus 183 ~L~~L~L~~N~l~~~~~-------~~~~~l~~L~~L~ 212 (555)
+|+.|+|++|.+.+..| ..+..+++|+.||
T Consensus 221 ~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 221 KLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp CCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred CcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 55555555555554333 2344566666665
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.28 E-value=1e-07 Score=91.34 Aligned_cols=76 Identities=34% Similarity=0.457 Sum_probs=54.4
Q ss_pred CCCcCEEEccCCcCCCc--CCccccCccccceeecccccccCCCchhccCCC--CCCEEeCCCCcCCCCCChh-------
Q 048796 157 YPPMESLDLSGNALTGV--LPSDIGNMGRLRLLNLANNHLSGKMPSELSKLG--ALEYLDLSGNQFKGEIPDK------- 225 (555)
Q Consensus 157 ~~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~p~~------- 225 (555)
+++|+.|+|++|.|++. ++..+..+++|+.|+|++|.|++. ..+..+. +|++|+|++|.+++..|..
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~i 246 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAI 246 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHH
Confidence 37788888888888873 345566788888888888888864 2333333 8999999999998766631
Q ss_pred hh--cCCCEEE
Q 048796 226 LS--LKLNEFN 234 (555)
Q Consensus 226 ~~--~~L~~L~ 234 (555)
+. ++|+.||
T Consensus 247 l~~~P~L~~LD 257 (267)
T 3rw6_A 247 RERFPKLLRLD 257 (267)
T ss_dssp HHHCTTCCEES
T ss_pred HHHCcccCeEC
Confidence 11 6777764
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=5e-07 Score=96.86 Aligned_cols=81 Identities=15% Similarity=0.055 Sum_probs=58.3
Q ss_pred eeecCCceEEEEEE-eCCCCEEEEEEeccCC----------hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEE
Q 048796 472 VLGRSSHGTLYKAT-LDSGHMLTVKWLRVGL----------VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 472 ~lG~G~~g~vy~~~-~~~g~~vavK~l~~~~----------~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 539 (555)
-.+.|+.|.++.++ +-.|+.+|||.+.... ....++|.+|+.+|+++ .|+||+++++++++... .|
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~--~y 318 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQS--GW 318 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSE--EE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCE--EE
Confidence 34555555555543 2358899999985421 12356799999999999 79999999999998776 99
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
|||||++||+|.++|
T Consensus 319 LVMEyv~G~~L~d~i 333 (569)
T 4azs_A 319 LVMEKLPGRLLSDML 333 (569)
T ss_dssp EEEECCCSEEHHHHH
T ss_pred EEEecCCCCcHHHHH
Confidence 999999999999986
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=97.99 E-value=3.7e-05 Score=77.91 Aligned_cols=154 Identities=14% Similarity=0.044 Sum_probs=112.2
Q ss_pred CCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeE
Q 048796 51 WEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNL 130 (555)
Q Consensus 51 ~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L 130 (555)
....+..+.+..+... .....+....+|+.+.+..+ +.......+..+..|+.+.+..+ ++......|..+.+|+.+
T Consensus 192 ~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i 268 (379)
T 4h09_A 192 AAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTL 268 (379)
T ss_dssp TTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEE
T ss_pred ccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccc
Confidence 3345666666554433 45566777888999888755 44456677888899999999776 554556678888899999
Q ss_pred EccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCE
Q 048796 131 NLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEY 210 (555)
Q Consensus 131 ~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 210 (555)
.+..+ +.......|..+ .+|+.+.+.++.++.+...+|.+|.+|+.++|..+ ++.....+|.++.+|+.
T Consensus 269 ~l~~~-i~~i~~~aF~~c---------~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~ 337 (379)
T 4h09_A 269 NFYAK-VKTVPYLLCSGC---------SNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALST 337 (379)
T ss_dssp EECCC-CSEECTTTTTTC---------TTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCC
T ss_pred ccccc-ceeccccccccc---------cccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCE
Confidence 88654 443333344444 88999999988888777888999999999999765 66566678899999999
Q ss_pred EeCCCCcCC
Q 048796 211 LDLSGNQFK 219 (555)
Q Consensus 211 L~Ls~N~l~ 219 (555)
+.+..+ ++
T Consensus 338 i~ip~~-v~ 345 (379)
T 4h09_A 338 ISYPKS-IT 345 (379)
T ss_dssp CCCCTT-CC
T ss_pred EEECCc-cC
Confidence 888654 54
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=1e-05 Score=77.49 Aligned_cols=71 Identities=17% Similarity=0.243 Sum_probs=52.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCE--EEEEEeccCChh------------------------cHHHHHHHHHHHHcCCCCc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHM--LTVKWLRVGLVR------------------------HKKEFAKEVKKIGSMRHPN 522 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~--vavK~l~~~~~~------------------------~~~~~~~ei~~l~~l~H~n 522 (555)
.+.||+|+||.||+|.. .+|+. ||||.++..... ....+.+|+..+.+++|++
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 46899999999999998 78999 999987543110 1236889999999998886
Q ss_pred c--eeeeEEEEcCCCceEEEEEeccC
Q 048796 523 I--VPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 523 i--v~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
+ ...+.+ .. .++||||+.
T Consensus 132 i~~p~~~~~----~~--~~lVmE~~g 151 (258)
T 1zth_A 132 VSVPQPYTY----MK--NVLLMEFIG 151 (258)
T ss_dssp CCCCCEEEE----ET--TEEEEECCE
T ss_pred CCCCeEEEc----CC--CEEEEEecC
Confidence 4 333332 23 689999994
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.84 E-value=6.2e-06 Score=73.28 Aligned_cols=82 Identities=9% Similarity=0.026 Sum_probs=40.7
Q ss_pred CccEEEccCCcCCCCCCccccCCCCccEEEeeCCc-CCCCCchhccCC----CCccEEEcCCCc-CCCCCchhhhCCCCC
Q 048796 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS-VTGTLPSLLEIS----PRLVTLDVSSNQ-LKGPIPDNFFSSMAL 127 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~l~~l----~~L~~L~L~~N~-l~~~~~~~~~~~~~L 127 (555)
+|+.|||+++.|++.--..+.++++|++|+|++|. |+...-..+..+ ++|++|+|++|. |+..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 36666666666554433444556666666666653 443322333332 245566665553 443222334445555
Q ss_pred CeEEccCC
Q 048796 128 TNLNLSGN 135 (555)
Q Consensus 128 ~~L~Ls~N 135 (555)
+.|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555554
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.70 E-value=8.6e-06 Score=72.37 Aligned_cols=60 Identities=15% Similarity=0.149 Sum_probs=29.8
Q ss_pred CCcCEEEccCCc-CCCcCCccccCc----cccceeeccccc-ccCCCchhccCCCCCCEEeCCCCc
Q 048796 158 PPMESLDLSGNA-LTGVLPSDIGNM----GRLRLLNLANNH-LSGKMPSELSKLGALEYLDLSGNQ 217 (555)
Q Consensus 158 ~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~ 217 (555)
++|++|+|++|. |++..-..++.+ ++|++|+|++|. |+...-..+..+++|++|+|+++.
T Consensus 85 ~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 85 QYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp SCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred CCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 445555555542 443322333332 346666666653 554333445556666666666653
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.67 E-value=1.5e-05 Score=72.18 Aligned_cols=83 Identities=20% Similarity=0.370 Sum_probs=39.9
Q ss_pred CCccEEEccCC-cCCC----CCCccccCCCCccEEEeeCCcCCCC----CchhccCCCCccEEEcCCCcCCCC----Cch
Q 048796 53 ANLEILDLSSN-KLSG----SLPNLTSQFDRLSTFNIRNNSVTGT----LPSLLEISPRLVTLDVSSNQLKGP----IPD 119 (555)
Q Consensus 53 ~~L~~L~Ls~N-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~----~~~ 119 (555)
+.|+.|+|++| .|.. .+.+.+..-..|+.|+|++|.|... +...+..-+.|++|+|++|.|... +.+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 34555555553 4432 1223334445555666666555522 223333445566666666665421 122
Q ss_pred hhhCCCCCCeEEccCC
Q 048796 120 NFFSSMALTNLNLSGN 135 (555)
Q Consensus 120 ~~~~~~~L~~L~Ls~N 135 (555)
.+.....|+.|+|++|
T Consensus 121 aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQ 136 (197)
T ss_dssp HTTTTCCCSEEECCCC
T ss_pred HHhhCCceeEEECCCC
Confidence 3334445666666543
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=97.67 E-value=1.3e-05 Score=80.61 Aligned_cols=80 Identities=11% Similarity=0.164 Sum_probs=51.1
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh--------------hcHHHH--------HHHHHHHHcCCCCcceeee
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV--------------RHKKEF--------AKEVKKIGSMRHPNIVPLR 527 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~--------------~~~~~~--------~~ei~~l~~l~H~niv~l~ 527 (555)
...||+|+||.||+|...+|+.||||.++.... ...... ..|...|.++.+..+.-..
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~ 179 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPE 179 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Confidence 568999999999999988899999998753210 011122 3455556666444332111
Q ss_pred EEEEcCCCceEEEEEeccCCCChhhh
Q 048796 528 AYYWGPREQERLLLADYIQGDSLALH 553 (555)
Q Consensus 528 g~~~~~~~~~~~lv~e~~~~GsL~~~ 553 (555)
-+.. .. .+|||||++++.|.++
T Consensus 180 p~~~-~~---~~LVME~i~G~~L~~l 201 (397)
T 4gyi_A 180 PIAQ-SR---HTIVMSLVDALPMRQV 201 (397)
T ss_dssp EEEE-ET---TEEEEECCSCEEGGGC
T ss_pred eeec-cC---ceEEEEecCCccHhhh
Confidence 1111 12 4799999999888764
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=97.61 E-value=4.9e-05 Score=78.09 Aligned_cols=51 Identities=22% Similarity=0.234 Sum_probs=42.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRH 520 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H 520 (555)
+++||+|+||.||+|+. .+|+.||||++..... ...+.|.+|+.++..++|
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~ 137 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG 137 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence 67999999999999996 6799999999874322 235789999999999987
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.52 E-value=2.2e-05 Score=71.10 Aligned_cols=64 Identities=19% Similarity=0.165 Sum_probs=28.5
Q ss_pred CCCCccEEEeeCC-cCCCC----CchhccCCCCccEEEcCCCcCCC----CCchhhhCCCCCCeEEccCCccc
Q 048796 75 QFDRLSTFNIRNN-SVTGT----LPSLLEISPRLVTLDVSSNQLKG----PIPDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 75 ~l~~L~~L~L~~N-~l~~~----~~~~l~~l~~L~~L~L~~N~l~~----~~~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
+-+.|++|+|++| .|... +.+.+..-+.|+.|+|++|+|.. .+...+.....|+.|+|++|.|.
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 3345555555553 44321 22334444455555555555541 12223333444555555555444
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00081 Score=56.68 Aligned_cols=54 Identities=19% Similarity=0.252 Sum_probs=28.1
Q ss_pred EEECCCCcCC-CCCCCCCC-CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcC
Q 048796 12 VLNLSSNSLS-GTLPTSLK-SCVILDLSRNMISGDISDMQNWEANLEILDLSSNKL 65 (555)
Q Consensus 12 ~L~Ls~N~l~-~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l 65 (555)
.++.++++|+ ..+|..++ +|++|+|++|+|+.+..+.|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 5555566554 23444333 455555555555555555555555555555555544
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0019 Score=61.37 Aligned_cols=80 Identities=11% Similarity=-0.020 Sum_probs=61.6
Q ss_pred CeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
..++.|+.+.||+... .+..+++|............+.+|..++..+. |..+.++++++...+. .|+||||++|.+
T Consensus 20 ~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~--~~lv~e~i~G~~ 96 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGW--SNLLMSEADGVL 96 (263)
T ss_dssp ECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTE--EEEEEECCSSEE
T ss_pred eeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCc--eEEEEEecCCee
Confidence 3566778889999986 47899999986532223456889999998874 6677788888876655 899999999998
Q ss_pred hhhh
Q 048796 550 LALH 553 (555)
Q Consensus 550 L~~~ 553 (555)
|.+.
T Consensus 97 l~~~ 100 (263)
T 3tm0_A 97 CSEE 100 (263)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 8663
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0026 Score=53.48 Aligned_cols=55 Identities=20% Similarity=0.254 Sum_probs=27.5
Q ss_pred EEEcCCCcCC--CCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCC
Q 048796 33 ILDLSRNMIS--GDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVT 90 (555)
Q Consensus 33 ~L~L~~N~l~--~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 90 (555)
.++.+++.++ .++..+. .+|+.|+|++|.|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp---~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP---VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC---TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC---cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555555 3332211 24555555555555444444555555555555555443
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0047 Score=58.29 Aligned_cols=73 Identities=15% Similarity=0.171 Sum_probs=55.1
Q ss_pred ecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcc--eeeeEEEEcCCCceEEEEEeccCCCChh
Q 048796 474 GRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNI--VPLRAYYWGPREQERLLLADYIQGDSLA 551 (555)
Q Consensus 474 G~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~ni--v~l~g~~~~~~~~~~~lv~e~~~~GsL~ 551 (555)
+.|..+.||+....+|..+++|..... ....+.+|+.+++.+.+.++ .+++++....+. .++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~--~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGR--DWLLLGEVPGQDLL 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSC--EEEEEECCSSEETT
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCC--CEEEEEecCCcccC
Confidence 355669999998777888999987543 22457788888888865554 457887776555 89999999998774
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=93.99 E-value=0.094 Score=50.32 Aligned_cols=75 Identities=19% Similarity=0.216 Sum_probs=53.6
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCC---cceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHP---NIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~---niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
...+|.|..+.||+.++.+|+.+.||+-..........|..|...|+.+.-. -+.+.+++ . + -++||||++
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~-~---~~lv~e~l~ 93 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D-D---RTLAMEWVD 93 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E-T---TEEEEECCC
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c-C---ceEEEEeec
Confidence 3568999999999999999999999987554433445688898888776421 23334432 2 2 478999998
Q ss_pred CCCh
Q 048796 547 GDSL 550 (555)
Q Consensus 547 ~GsL 550 (555)
++..
T Consensus 94 ~~~~ 97 (288)
T 3f7w_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 8754
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=93.90 E-value=0.056 Score=53.73 Aligned_cols=80 Identities=9% Similarity=0.162 Sum_probs=54.9
Q ss_pred CeeecCCceEEEEEEeCCCCEEEEEEec--cCCh-hcHHHHHHHHHHHHcCC--CCcceeeeEEEEcCCC-ceEEEEEec
Q 048796 471 EVLGRSSHGTLYKATLDSGHMLTVKWLR--VGLV-RHKKEFAKEVKKIGSMR--HPNIVPLRAYYWGPRE-QERLLLADY 544 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~g~~vavK~l~--~~~~-~~~~~~~~ei~~l~~l~--H~niv~l~g~~~~~~~-~~~~lv~e~ 544 (555)
+.++.|.++.||+.... +..+++|+.. .... .....+.+|..++..+. +..+.++++++.+... ...++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 46889999999999874 4678888776 3321 23456888999998887 4557788888765421 127899999
Q ss_pred cCCCChh
Q 048796 545 IQGDSLA 551 (555)
Q Consensus 545 ~~~GsL~ 551 (555)
++|..+.
T Consensus 123 v~G~~l~ 129 (359)
T 3dxp_A 123 VSGRVLW 129 (359)
T ss_dssp CCCBCCC
T ss_pred cCCeecC
Confidence 9998773
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=90.03 E-value=0.45 Score=47.82 Aligned_cols=75 Identities=8% Similarity=-0.022 Sum_probs=48.0
Q ss_pred CCeeecCCceEEEEEEeC-CCCEEEEEEeccCCh-------hcHHHHHHHHHHHHcCCC--Ccce-eeeEEEEcCCCceE
Q 048796 470 AEVLGRSSHGTLYKATLD-SGHMLTVKWLRVGLV-------RHKKEFAKEVKKIGSMRH--PNIV-PLRAYYWGPREQER 538 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~-------~~~~~~~~ei~~l~~l~H--~niv-~l~g~~~~~~~~~~ 538 (555)
.+.+|.|.++.||++... +++.++||....... ...+.+..|.+++..+.+ +..+ +++.+ . .+. .
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~-d-~~~--~ 110 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS-D-TEM--A 110 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE-E-TTT--T
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE-c-CCc--c
Confidence 357899999999999763 568899997643211 123456778888876632 4444 44433 2 334 6
Q ss_pred EEEEeccCCC
Q 048796 539 LLLADYIQGD 548 (555)
Q Consensus 539 ~lv~e~~~~G 548 (555)
++||||+++.
T Consensus 111 ~lvmE~l~g~ 120 (397)
T 2olc_A 111 VTVMEDLSHL 120 (397)
T ss_dssp EEEECCCTTS
T ss_pred EEEEEeCCCc
Confidence 8999999874
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=89.99 E-value=0.73 Score=44.72 Aligned_cols=74 Identities=12% Similarity=0.066 Sum_probs=56.3
Q ss_pred CeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC---CCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR---HPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~---H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
+.++.|.+..+|+... ++..++||.-... ....|..|...|+.+. ...+.+.+.++...+. .++||||+++
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~--~~lvme~l~G 115 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGH--SFLLLEALNK 115 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSE--EEEEEECCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCc--eEEEEEeccC
Confidence 4688999999999886 5678889976532 3567888888877663 3567778887776555 8999999999
Q ss_pred CCh
Q 048796 548 DSL 550 (555)
Q Consensus 548 GsL 550 (555)
..+
T Consensus 116 ~~~ 118 (312)
T 3jr1_A 116 SKN 118 (312)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=87.42 E-value=1.3 Score=41.57 Aligned_cols=75 Identities=15% Similarity=0.207 Sum_probs=53.0
Q ss_pred eecCCce-EEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 473 LGRSSHG-TLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 473 lG~G~~g-~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
+..|..| .||+-.. .++..+.||+-... ...++.+|...|+.+. +--+.++++++...+. .++|||++++.+
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~--~~lvme~l~G~~ 106 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDD--AWLLTTAIPGKT 106 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTE--EEEEEECCCSEE
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCe--EEEEEEeeCCcc
Confidence 4445555 6898776 45677889976432 3467888998888764 3235567888877665 899999999977
Q ss_pred hhh
Q 048796 550 LAL 552 (555)
Q Consensus 550 L~~ 552 (555)
+.+
T Consensus 107 ~~~ 109 (272)
T 4gkh_A 107 AFQ 109 (272)
T ss_dssp HHH
T ss_pred ccc
Confidence 654
|
| >2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A | Back alignment and structure |
|---|
Probab=84.34 E-value=0.47 Score=30.74 Aligned_cols=10 Identities=10% Similarity=0.059 Sum_probs=4.0
Q ss_pred HHHHHHHHhh
Q 048796 310 FVLLAYHRAQ 319 (555)
Q Consensus 310 ~~~~~~~~~~ 319 (555)
+++++|.|||
T Consensus 29 l~~~~~~RRR 38 (44)
T 2jwa_A 29 VVFGILIKRR 38 (44)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHhheehh
Confidence 3333444433
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=80.49 E-value=3.4 Score=39.64 Aligned_cols=74 Identities=15% Similarity=0.076 Sum_probs=52.5
Q ss_pred CeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCC---cceeeeEEEE-cCCCceEEEEEeccC
Q 048796 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHP---NIVPLRAYYW-GPREQERLLLADYIQ 546 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~---niv~l~g~~~-~~~~~~~~lv~e~~~ 546 (555)
..++.|....||+. |..++||.-.. ......+.+|..++..+.+. .+.+.+.++. ..+. .++||||++
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~--~~~v~e~i~ 96 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGN--PFVGYRKVQ 96 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSC--EEEEEECCC
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCc--eEEEEeccC
Confidence 45788888899987 56688887432 22356789999999988753 2445666664 2333 789999999
Q ss_pred CCChhh
Q 048796 547 GDSLAL 552 (555)
Q Consensus 547 ~GsL~~ 552 (555)
|..+.+
T Consensus 97 G~~l~~ 102 (306)
T 3tdw_A 97 GQILGE 102 (306)
T ss_dssp SEECHH
T ss_pred CeECch
Confidence 977654
|
| >2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A | Back alignment and structure |
|---|
Probab=80.02 E-value=0.59 Score=29.40 Aligned_cols=21 Identities=24% Similarity=0.300 Sum_probs=9.0
Q ss_pred eeeehhhHHHHHHHHHHHHHH
Q 048796 295 VAIIVASVGAAVMIVFVLLAY 315 (555)
Q Consensus 295 ~~iv~~~~~~~~~~~~~~~~~ 315 (555)
.++++++++++.+++.+.+++
T Consensus 14 AGiVvG~v~gv~li~~l~~~~ 34 (38)
T 2k1k_A 14 VAVIFGLLLGAALLLGILVFR 34 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeehHHHHHHHHHHHHHHHH
Confidence 444444444444444333333
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 555 | ||||
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 1e-19 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 8e-12 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-10 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-09 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 6e-17 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 2e-11 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 5e-10 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 2e-04 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 3e-16 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 3e-08 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-07 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 7e-07 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-06 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-06 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-13 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-11 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-07 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 2e-11 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 3e-11 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 1e-10 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 2e-10 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 4e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-10 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-09 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 5e-08 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 9e-05 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 7e-10 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-09 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 2e-09 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 4e-09 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 5e-09 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 5e-09 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 9e-09 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 9e-09 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 1e-08 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-08 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 1e-08 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 2e-08 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-08 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 2e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 3e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 4e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 3e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.002 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.003 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.004 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 3e-08 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 6e-08 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 6e-08 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-07 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-07 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-05 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 3e-05 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-04 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-07 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-07 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-07 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 2e-07 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-07 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 3e-07 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 3e-07 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-07 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 4e-07 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 4e-07 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 4e-07 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 5e-07 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.001 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 6e-07 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 6e-07 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 7e-07 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 1e-06 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-06 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 2e-06 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 2e-06 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 2e-06 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 4e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 4e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 9e-05 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 5e-04 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 7e-04 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 0.002 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 5e-06 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 5e-06 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 6e-06 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 9e-06 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 9e-06 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 1e-05 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 1e-05 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 1e-05 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-05 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-05 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 2e-05 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 2e-05 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 3e-05 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 5e-05 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 5e-05 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 5e-05 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 9e-05 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 1e-04 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 2e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 2e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.003 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 3e-04 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 3e-04 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 4e-04 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 0.001 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.002 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.004 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 0.002 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 0.003 |
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 88.9 bits (219), Expect = 1e-19
Identities = 40/192 (20%), Positives = 71/192 (36%), Gaps = 21/192 (10%)
Query: 58 LDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPI 117
L ++N++S P L ++ N + L L LD+++NQ+
Sbjct: 202 LIATNNQISDITPL--GILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLA 257
Query: 118 PDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELL-----------VLPSYPPMESLDLS 166
P LT L L N S PL A L + + + L L
Sbjct: 258 P--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLY 315
Query: 167 GNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKL 226
N ++ + P + ++ +L+ L ANN +S S L+ L + +L NQ P
Sbjct: 316 FNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISDLTPLAN 371
Query: 227 SLKLNEFNVSYN 238
++ + ++
Sbjct: 372 LTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 64.6 bits (156), Expect = 8e-12
Identities = 36/189 (19%), Positives = 62/189 (32%), Gaps = 38/189 (20%)
Query: 2 IHGINSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDL 60
T L L+L+ N L SL + LDL+ N IS L L L
Sbjct: 213 TPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLT--KLTELKL 270
Query: 61 SSNKLSGSLP--------------------NLTSQFDRLSTFNIRNNSVTGTLPSLLEIS 100
+N++S P + S L+ + N+++ P +
Sbjct: 271 GANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSL 328
Query: 101 PRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPM 160
+L L ++N++ + + + L+ N S PL + L +
Sbjct: 329 TKLQRLFFANNKVSDV--SSLANLTNINWLSAGHNQISDLTPLAN--------LTR---I 375
Query: 161 ESLDLSGNA 169
L L+ A
Sbjct: 376 TQLGLNDQA 384
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 60.4 bits (145), Expect = 2e-10
Identities = 56/275 (20%), Positives = 97/275 (35%), Gaps = 33/275 (12%)
Query: 13 LNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLP- 70
L +++ T+ + L L R I I ++ NL ++ S+N+L+ P
Sbjct: 27 TVLGKTNVTDTVSQTDLDQVTTLQADRLGIK-SIDGVEYLN-NLTQINFSNNQLTDITPL 84
Query: 71 -NLTS----------------QFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQL 113
NLT + + + + T L+ L L++SSN +
Sbjct: 85 KNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI 144
Query: 114 KGPIPDNFFSSM--------ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDL 165
+ +S+ L+ + + S+ S++ VL +ESL
Sbjct: 145 SDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIA 204
Query: 166 SGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDK 225
+ N ++ + P I + L L+L N L L+ L L LDL+ NQ P
Sbjct: 205 TNNQISDITPLGI--LTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLS 260
Query: 226 LSLKLNEFNVSYNDLSGPIPENLRNFPKSSFHPGN 260
KL E + N +S P + N
Sbjct: 261 GLTKLTELKLGANQISNISPLAGLTALTNLELNEN 295
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 56.2 bits (134), Expect = 4e-09
Identities = 35/169 (20%), Positives = 56/169 (33%), Gaps = 37/169 (21%)
Query: 105 TLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164
+L ++NQ+ P ++ L L+L+GN + L S + LD
Sbjct: 201 SLIATNNQISDITPLGILTN--LDELSLNGNQLKD-----------IGTLASLTNLTDLD 247
Query: 165 LSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSK-------------------- 204
L+ N ++ + P + + +L L L N +S P
Sbjct: 248 LANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISN 305
Query: 205 LGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPENLRNFPK 253
L L YL L N P KL + N +S +L N
Sbjct: 306 LKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSD--VSSLANLTN 352
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.1 bits (193), Expect = 6e-17
Identities = 54/257 (21%), Positives = 89/257 (34%), Gaps = 14/257 (5%)
Query: 7 STTLSVLNLSSNSLSGTLPTSLKSCVILDLSR----NMISGDISDMQNWEANLEILDLSS 62
+ L N +S S ++C L + + D + ++ +
Sbjct: 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90
Query: 63 NKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFF 122
+L P RL T ++ + P L L L + N L+ D F
Sbjct: 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFR 150
Query: 123 SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMG 182
LT+L L GN S ++ L L N + V P ++G
Sbjct: 151 DLGNLTHLFLHGNRISSVPER---------AFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 201
Query: 183 RLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDK-LSLKLNEFNVSYNDLS 241
RL L L N+LS L+ L AL+YL L+ N + + + L L +F S +++
Sbjct: 202 RLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVP 261
Query: 242 GPIPENLRNFPKSSFHP 258
+P+ L
Sbjct: 262 CSLPQRLAGRDLKRLAA 278
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.5 bits (150), Expect = 2e-11
Identities = 41/190 (21%), Positives = 58/190 (30%), Gaps = 16/190 (8%)
Query: 10 LSVLNLSSNSLSGTLPTSLKSCVIL---DLSRNMISGDISDMQNWEANLEILDLSSNKLS 66
L L+L L P + L L N + D NL L L N++S
Sbjct: 107 LHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS 166
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMA 126
L + N V P RL+TL + +N L + A
Sbjct: 167 SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA 226
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRL 186
L L L+ N + R A ++ S + + LP + L
Sbjct: 227 LQYLRLNDNPWVCDCRARPLWAW----------LQKFRGSSSEVPCSLPQRLAG---RDL 273
Query: 187 LNLANNHLSG 196
LA N L G
Sbjct: 274 KRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.3 bits (139), Expect = 5e-10
Identities = 32/193 (16%), Positives = 57/193 (29%), Gaps = 13/193 (6%)
Query: 28 LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87
L L L R + + A L+ L L N L + L+ + N
Sbjct: 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN 163
Query: 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSH 147
++ L L + N++ P F L L L N S +
Sbjct: 164 RISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAP 223
Query: 148 ASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGA 207
L + L L+ N + L+ +++ + +P L+
Sbjct: 224 LRAL---------QYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQRLAG--- 270
Query: 208 LEYLDLSGNQFKG 220
+ L+ N +G
Sbjct: 271 RDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.3 bits (95), Expect = 2e-04
Identities = 29/175 (16%), Positives = 52/175 (29%), Gaps = 13/175 (7%)
Query: 81 TFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGA 140
T + + +P I + + N++ +F + NL + +
Sbjct: 15 TTSCPQQGLQ-AVPV--GIPAASQRIFLHGNRISHVPAASFRA---CRNLTILWLHSNVL 68
Query: 141 IPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPS 200
+ ++ + + L V P+ +GRL L+L L P
Sbjct: 69 ARIDAAAFT-----GLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPG 123
Query: 201 ELSKLGALEYLDLSGNQFKGEIPDKLSL--KLNEFNVSYNDLSGPIPENLRNFPK 253
L AL+YL L N + D L + N +S R
Sbjct: 124 LFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHS 178
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 77.5 bits (189), Expect = 3e-16
Identities = 57/262 (21%), Positives = 101/262 (38%), Gaps = 45/262 (17%)
Query: 6 NSTTLSVLNLSSNSLSGTLP-----TSLKSCVILDLSRNM-ISGDISDMQNWEANLEILD 59
+ ++ L+LS +L P +L L + + G I L L
Sbjct: 48 QTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLY 107
Query: 60 LSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPD 119
++ +SG++P+ SQ L T + N+++GTLP + P LV + N++ G IPD
Sbjct: 108 ITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD 167
Query: 120 NFFSSMALT-NLNLSGNGFSGAIPLRSSHASELLVLPS---------------------- 156
++ S L ++ +S N +G IP ++ + V S
Sbjct: 168 SYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIH 227
Query: 157 ---------------YPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSE 201
+ LDL N + G LP + + L LN++ N+L G++P +
Sbjct: 228 LAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-Q 286
Query: 202 LSKLGALEYLDLSGNQFKGEIP 223
L + + N+ P
Sbjct: 287 GGNLQRFDVSAYANNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 53.2 bits (126), Expect = 3e-08
Identities = 59/271 (21%), Positives = 98/271 (36%), Gaps = 64/271 (23%)
Query: 47 DMQNWEANLEILDLSSNKLSG--SLPNLTSQFDRLSTFNIRNN-SVTGTLPSLLEISPRL 103
D + LDLS L +P+ + L+ I ++ G +P + +L
Sbjct: 44 DTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQL 103
Query: 104 VTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESL 163
L ++ + G IPD L L+ S N SG +P + S P + +
Sbjct: 104 HYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS---------ISSLPNLVGI 154
Query: 164 DLSGNALTGVLPSDIGNMGRLRL-LNLANNHLSGKMPSELSKLGALEYL----------- 211
GN ++G +P G+ +L + ++ N L+GK+P + L
Sbjct: 155 TFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDAS 214
Query: 212 -----------------------------------DLSGNQFKGEIPDKLSL--KLNEFN 234
DL N+ G +P L+ L+ N
Sbjct: 215 VLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLN 274
Query: 235 VSYNDLSGPIPE--NLRNFPKSSFHPGNALL 263
VS+N+L G IP+ NL+ F S++ N L
Sbjct: 275 VSFNNLCGEIPQGGNLQRFDVSAYA-NNKCL 304
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 51.3 bits (121), Expect = 1e-07
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 80 STFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSG 139
+ ++RNN + GTLP L L +L+VS N L G IP + + N
Sbjct: 247 NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLC 305
Query: 140 AIPL 143
PL
Sbjct: 306 GSPL 309
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 49.0 bits (115), Expect = 7e-07
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 48 MQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLD 107
NL LDL +N++ G+LP +Q L + N+ N++ G +P + R
Sbjct: 239 KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQ-RFDVSA 297
Query: 108 VSSNQL--KGPIP 118
++N+ P+P
Sbjct: 298 YANNKCLCGSPLP 310
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 48.6 bits (114), Expect = 1e-06
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 3 HGINSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILD 59
S L+ L+L +N + GTLP LK L++S N + G+I N + ++
Sbjct: 239 KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQ-RFDVSA 297
Query: 60 LSSNKLSGSLP 70
++NK P
Sbjct: 298 YANNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 47.4 bits (111), Expect = 2e-06
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 12/72 (16%)
Query: 107 DVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLS 166
D+ +N++ G +P L +LN+S N G IP + L + +
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-------QGGNLQR---FDVSAYA 299
Query: 167 GN-ALTGV-LPS 176
N L G LP+
Sbjct: 300 NNKCLCGSPLPA 311
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 68.9 bits (167), Expect = 2e-13
Identities = 46/260 (17%), Positives = 79/260 (30%), Gaps = 51/260 (19%)
Query: 7 STTLSVLNLSSNSLSGTLPTSLKSCV---ILDLSRNMISGDISDMQNWEANLEILDLSSN 63
++L+L +N ++ K+ L L N IS LE L LS N
Sbjct: 30 PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 89
Query: 64 KLSGSLPNLTSQFDRLSTFNIRNNSV-----------------------TGTLPSLLEIS 100
+L + L V +G +
Sbjct: 90 QLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM 149
Query: 101 PRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPS---- 156
+L + ++ + IP S LT L+L GN + + L L
Sbjct: 150 KKLSYIRIADTNIT-TIPQGLPPS--LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNS 206
Query: 157 -----------YPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSG------KMP 199
P + L L+ N L V P + + ++++ L NN++S P
Sbjct: 207 ISAVDNGSLANTPHLRELHLNNNKLVKV-PGGLADHKYIQVVYLHNNNISAIGSNDFCPP 265
Query: 200 SELSKLGALEYLDLSGNQFK 219
+K + + L N +
Sbjct: 266 GYNTKKASYSGVSLFSNPVQ 285
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 62.7 bits (151), Expect = 2e-11
Identities = 45/275 (16%), Positives = 86/275 (31%), Gaps = 25/275 (9%)
Query: 6 NSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKL 65
+ + +L + LP +LDL N I+ NL L L +NK+
Sbjct: 11 HLRVVQCSDLGLEKVPKDLPPDTA---LLDLQNNKITEIKDGDFKNLKNLHTLILINNKI 67
Query: 66 SGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM 125
S P + +L + N + + + L + +++ + + + M
Sbjct: 68 SKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFN-GLNQM 126
Query: 126 ALTNLNLSGNGFSGAIPLRSSHASELLV-------LPSYPP-----MESLDLSGNALTGV 173
+ L + SG +L + + P + L L GN +T V
Sbjct: 127 IVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKV 186
Query: 174 LPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSL-KLNE 232
+ + + L L L+ N +S L+ L L L+ N+ +
Sbjct: 187 DAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQV 246
Query: 233 FNVSYNDLSGPIPENLRNFPKSSFHPGNALLIFPD 267
+ N++S + F P
Sbjct: 247 VYLHNNNIS--------AIGSNDFCPPGYNTKKAS 273
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 51.2 bits (121), Expect = 1e-07
Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 4/171 (2%)
Query: 1 SIHGINSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDL 60
+G+N + L + SG + + L R + + Q +L L L
Sbjct: 119 VFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHL 178
Query: 61 SSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDN 120
NK++ + L+ + NS++ L +P L L +++N+L +P
Sbjct: 179 DGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGG 237
Query: 121 FFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT 171
+ + L N S SY + L N +
Sbjct: 238 LADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASY---SGVSLFSNPVQ 285
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.0 bits (150), Expect = 2e-11
Identities = 16/85 (18%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYY 530
+ LG G + + + +K ++ G + + EF +E K + ++ H +V L Y
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL--YG 66
Query: 531 WGPREQERLLLADYIQGDSLALHLY 555
+++ ++ +Y+ L +L
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYLR 91
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.0 bits (150), Expect = 3e-11
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYY 530
E LG G ++ + + VK L+ G + F E + ++H +V L A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 531 WGPREQERLLLADYIQGDSLALHLY 555
++ ++ +Y++ SL L
Sbjct: 78 ---TQEPIYIITEYMENGSLVDFLK 99
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.1 bits (145), Expect = 1e-10
Identities = 14/83 (16%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYY 530
+ +G G ++ + + +K +R G + +++F +E + + + HP +V L Y
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQL--YG 67
Query: 531 WGPREQERLLLADYIQGDSLALH 553
+ L+ ++++ L+ +
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDY 90
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.7 bits (143), Expect = 2e-10
Identities = 42/270 (15%), Positives = 94/270 (34%), Gaps = 35/270 (12%)
Query: 13 LNLSSNSLSGTLPTSL--KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSG-SL 69
L+L+ +L + L + + R+ + +++ + ++ +DLS++ + +L
Sbjct: 5 LDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSP-FRVQHMDLSNSVIEVSTL 63
Query: 70 PNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSS--NQLKGPIPDNFFSSMAL 127
+ SQ +L ++ ++ + + L + LV L++S + + S L
Sbjct: 64 HGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 123
Query: 128 TNLNLSGNG----------------------FSGAIPLRSSHASELLVLPSYPPMESLDL 165
LNLS SG LV +
Sbjct: 124 DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLS 183
Query: 166 SGNALTGVLPSDIGNMGRLRLLNLAN-NHLSGKMPSELSKLGALEYLDLSGNQFKGEIPD 224
L + + L+ L+L+ + + EL ++ L+ L + G G +
Sbjct: 184 DSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQL 243
Query: 225 KLS----LKLNEFNVSYNDLSGPIPENLRN 250
L++N + + ++ P N +N
Sbjct: 244 LKEALPHLQINCSHFT--TIARPTIGNKKN 271
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.1 bits (92), Expect = 4e-04
Identities = 17/113 (15%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Query: 81 TFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGA 140
T ++ ++ + L +S ++ + + P+ ++F S + +++LS + +
Sbjct: 4 TLDLTGKNLHPDVTGRL-LSQGVIAFRCPRSFMDQPLAEHF-SPFRVQHMDLSNSVIEVS 61
Query: 141 IPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNH 193
+L +++L L G L+ + + + L LNL+
Sbjct: 62 TLHG--------ILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCS 106
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.8 bits (140), Expect = 7e-10
Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 10/94 (10%)
Query: 54 NLEILDLSSNKLSGS-LPNLTSQFDRLSTFNIRNNSVTG----TLPSLLEISPRLVTLDV 108
+++ LD+ +LS + L + + + +T + S L ++P L L++
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 109 SSNQLKGPIPDNFFSSMA-----LTNLNLSGNGF 137
SN+L + + L+L
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCL 96
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.9 bits (135), Expect = 3e-09
Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 5/87 (5%)
Query: 160 MESLDLSGNALTGV-LPSDIGNMGRLRLLNLANNHLSGK----MPSELSKLGALEYLDLS 214
++SLD+ L+ + + + +++ L + L+ + S L AL L+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 215 GNQFKGEIPDKLSLKLNEFNVSYNDLS 241
N+ + L + LS
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLS 90
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.1 bits (125), Expect = 5e-08
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 9/82 (10%)
Query: 154 LPSYPPMESLDLSGNALTGV----LPSDIGNMGRLRLLNLANNHLSGKMPSELSK----- 204
+ L L+ ++ L + + LR L+L+NN L +L +
Sbjct: 365 GQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQP 424
Query: 205 LGALEYLDLSGNQFKGEIPDKL 226
LE L L + E+ D+L
Sbjct: 425 GCLLEQLVLYDIYWSEEMEDRL 446
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.0 bits (117), Expect = 4e-07
Identities = 14/102 (13%), Positives = 29/102 (28%), Gaps = 8/102 (7%)
Query: 100 SPRLVTLDVSSNQLKGPIPDNFFSSMA-LTNLNLSGNGFSGAIPLRSSHASELL-VLPSY 157
S + +LD+ +L + + L G + + ++ L
Sbjct: 1 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLT------EARCKDISSALRVN 54
Query: 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMP 199
P + L+L N L V + + + L
Sbjct: 55 PALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCL 96
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.0 bits (117), Expect = 4e-07
Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 11/86 (12%)
Query: 180 NMGRLRLLNLANNHLSGK----MPSELSKLGALEYLDLSGNQFKGEIPDKLS-------L 228
LR+L LA+ +S + + L +L LDLS N +L
Sbjct: 367 PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGC 426
Query: 229 KLNEFNVSYNDLSGPIPENLRNFPKS 254
L + + S + + L+ K
Sbjct: 427 LLEQLVLYDIYWSEEMEDRLQALEKD 452
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (111), Expect = 2e-06
Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 12/79 (15%)
Query: 6 NSTTLSVLNLSSNSLSGT----LPTSLKSC---VILDLSRNMISGD-----ISDMQNWEA 53
+ L VL L+ +S + L +L + LDLS N + + ++
Sbjct: 367 PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGC 426
Query: 54 NLEILDLSSNKLSGSLPNL 72
LE L L S + +
Sbjct: 427 LLEQLVLYDIYWSEEMEDR 445
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (111), Expect = 2e-06
Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 13/94 (13%)
Query: 7 STTLSVLNLSSNSLSGT----LPTSLKSCVILDLSRNMISGD----ISDMQNWEANLEIL 58
S + L++ LS L L+ C ++ L ++ IS L L
Sbjct: 1 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 60
Query: 59 DLSSNKLSGS-----LPNLTSQFDRLSTFNIRNN 87
+L SN+L L L + ++ +++N
Sbjct: 61 NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (111), Expect = 2e-06
Identities = 23/93 (24%), Positives = 31/93 (33%), Gaps = 10/93 (10%)
Query: 118 PDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSD 177
L L L+ S + SS A+ LL S + LDLS N L
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSC--SSLAATLLANHS---LRELDLSNNCLGDAGILQ 416
Query: 178 IG-----NMGRLRLLNLANNHLSGKMPSELSKL 205
+ L L L + + S +M L L
Sbjct: 417 LVESVRQPGCLLEQLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.7 bits (98), Expect = 9e-05
Identities = 18/100 (18%), Positives = 32/100 (32%), Gaps = 25/100 (25%)
Query: 48 MQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLD 107
+ + L +L L+ +S +S +L + L + L LD
Sbjct: 364 LGQPGSVLRVLWLADCDVS--------------------DSSCSSLAATLLANHSLRELD 403
Query: 108 VSSNQLKGPIPDNFFSSM-----ALTNLNLSGNGFSGAIP 142
+S+N L S+ L L L +S +
Sbjct: 404 LSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEME 443
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 58.5 bits (141), Expect = 7e-10
Identities = 18/86 (20%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAY 529
E LG + G +++ T +G+ K++ K+ KE++ + +RHP +V L +
Sbjct: 32 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL--H 89
Query: 530 YWGPREQERLLLADYIQGDSLALHLY 555
+ E +++ +++ G L +
Sbjct: 90 DAFEDDNEMVMIYEFMSGGELFEKVA 115
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.0 bits (137), Expect = 1e-09
Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYY 530
LG+ G ++ T + + +K L+ G + F +E + + +RH +V L A
Sbjct: 23 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV 81
Query: 531 WGPREQERLLLADYIQGDSLALH 553
E+ ++ +Y+ SL
Sbjct: 82 S---EEPIYIVTEYMSKGSLLDF 101
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.5 bits (136), Expect = 2e-09
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYY 530
+ +G S GT+YK + + + + + F EV + RH NI+ Y
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 531 WGPREQERLLLADYIQGDSLALHLY 555
P+ ++ + +G SL HL+
Sbjct: 74 TAPQ---LAIVTQWCEGSSLYHHLH 95
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.8 bits (134), Expect = 4e-09
Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAY 529
LG + G +YKA ++ + K + +++ E+ + S HPNIV L
Sbjct: 18 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL--L 75
Query: 530 YWGPREQERLLLADYIQGDSLALHLY 555
E +L ++ G ++ +
Sbjct: 76 DAFYYENNLWILIEFCAGGAVDAVML 101
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.0 bits (132), Expect = 5e-09
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYY 530
+ +G+ G + G+ + VK ++ + F E + +RH N+V L
Sbjct: 13 QTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVI 69
Query: 531 WGPREQERLLLADYIQGDSLALHLY 555
+ ++ +Y+ SL +L
Sbjct: 70 VEEKGGLYIVT-EYMAKGSLVDYLR 93
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 55.8 bits (134), Expect = 5e-09
Identities = 15/85 (17%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAY 529
E LG + G +++ +G + K++ K E+ + + HP ++ L +
Sbjct: 35 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINL--H 92
Query: 530 YWGPREQERLLLADYIQGDSLALHL 554
+ E +L+ +++ G L +
Sbjct: 93 DAFEDKYEMVLILEFLSGGELFDRI 117
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.6 bits (131), Expect = 9e-09
Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAY 529
E +G+ + GT+Y A + +G + ++ + + K+ E+ + ++PNIV
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY--L 83
Query: 530 YWGPREQERLLLADYIQGDSLALHLY 555
E ++ +Y+ G SL +
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVT 109
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 54.4 bits (130), Expect = 9e-09
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 6/91 (6%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHK---KEFAKEVKKIGSMRHPNIVPL 526
E+LG ++ A L + VK LR L R F +E + ++ HP IV +
Sbjct: 13 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 72
Query: 527 RAYYW--GPREQERLLLADYIQGDSLALHLY 555
P ++ +Y+ G +L ++
Sbjct: 73 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVH 103
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.8 bits (129), Expect = 1e-08
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLR 527
+G S+G K G +L K L G + K+ EV + ++HPNIV
Sbjct: 10 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 69
Query: 528 AYYWGPREQERLLLADYIQGDSLALHL 554
++ +Y +G LA +
Sbjct: 70 DRIIDRTNTTLYIVMEYCEGGDLASVI 96
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.1 bits (129), Expect = 1e-08
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYY 530
E +G+ G +++ G + VK R E+ + +RH NI+ A
Sbjct: 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAAD 66
Query: 531 W--GPREQERLLLADYIQGDSLALHL 554
+ L++DY + SL +L
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYL 92
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 54.2 bits (130), Expect = 1e-08
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHK---KEFAKEVKKIGSMRHPNIVPL 526
+G S G +Y A + + ++ +K + + ++ KEV+ + +RHPN +
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 527 RAYYWGPREQERLLLADYIQGDSLALHLY 555
R Y RE L+ +Y G + L
Sbjct: 81 RGCYL--REHTAWLVMEYCLGSASDLLEV 107
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 54.0 bits (129), Expect = 2e-08
Identities = 20/113 (17%), Positives = 43/113 (38%), Gaps = 21/113 (18%)
Query: 460 FTAEELSRAPA--------------EVLGRSSHGTLYKATL----DSGHMLTVKWLRVGL 501
FT E+ + A +V+G G + L + +K L+ G
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 502 V-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDSLALH 553
+ +++F E +G HPN++ L + +++ ++++ SL
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHL--EGVVTKSTPVMIITEFMENGSLDSF 117
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.9 bits (129), Expect = 2e-08
Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRA 528
LG + G ++K + SG ++ K + + + + + +E++ + P IV
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGF-- 69
Query: 529 YYWGPREQERLLLADYIQGDSLALHLY 555
Y + E + +++ G SL L
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLK 96
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 53.6 bits (128), Expect = 2e-08
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAY 529
LG +G +Y+ + VK L+ +EF KE + ++HPN+V L
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL--L 79
Query: 530 YWGPREQERLLLADYIQGDSLALHLY 555
RE ++ +++ +L +L
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLR 105
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 53.7 bits (127), Expect = 3e-08
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Query: 36 LSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPS 95
N S +I + + +LE L++S+NKL LP L RL N + +P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPE 321
Query: 96 LLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLS 133
L L L V N L+ PD S + +L ++
Sbjct: 322 LP---QNLKQLHVEYNPLRE-FPDIPES---VEDLRMN 352
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 53.3 bits (126), Expect = 4e-08
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQ 217
P +E L++S N L LP+ L L + NHL+ ++P L+ L + N
Sbjct: 284 PSLEELNVSNNKLIE-LPALPPR---LERLIASFNHLA-EVPELPQN---LKQLHVEYNP 335
Query: 218 FKG--EIPDKL-SLKLN 231
+ +IP+ + L++N
Sbjct: 336 LREFPDIPESVEDLRMN 352
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 51.0 bits (120), Expect = 2e-07
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 165 LSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPD 224
NA + + S L LN++NN L ++P+ + LE L S N E+P+
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPR---LERLIASFNHLA-EVPE 321
Query: 225 KLSLKLNEFNVSYNDLSG--PIPENLRN 250
L + +V YN L IPE++ +
Sbjct: 322 LPQ-NLKQLHVEYNPLREFPDIPESVED 348
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 51.0 bits (120), Expect = 2e-07
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 6/72 (8%)
Query: 8 TTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSG 67
+L LN+S+N L LP L S N ++ Q NL+ L + N L
Sbjct: 284 PSLEELNVSNNKLI-ELPALPPRLERLIASFNHLAEVPELPQ----NLKQLHVEYNPLR- 337
Query: 68 SLPNLTSQFDRL 79
P++ + L
Sbjct: 338 EFPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 45.2 bits (105), Expect = 1e-05
Identities = 24/99 (24%), Positives = 34/99 (34%), Gaps = 20/99 (20%)
Query: 111 NQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPP-MESLDLSGNA 169
N I +L LN+S N LP+ PP +E L S N
Sbjct: 270 NASSNEIRSLCDLPPSLEELNVSNNKLIE--------------LPALPPRLERLIASFNH 315
Query: 170 LTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGAL 208
L +P N L+ L++ N L + P + L
Sbjct: 316 LAE-VPELPQN---LKQLHVEYNPLR-EFPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 41.0 bits (94), Expect = 3e-04
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 188 NLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPEN 247
N S ++ S +LE L++S N+ E+P +L S+N L+ +PE
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPP-RLERLIASFNHLAE-VPEL 322
Query: 248 LRNFPKSSFHPGNALLIFPDGVPS 271
+N + N L FPD S
Sbjct: 323 PQNLKQLHVE-YNPLREFPDIPES 345
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 38.3 bits (87), Expect = 0.002
Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Query: 10 LSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSG 67
L L++ LS +LP L S N ++++ +L+ L + +N L
Sbjct: 40 AHELELNNLGLS-SLPELPPHLESLVASCN----SLTELPELPQSLKSLLVDNNNLKA 92
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 37.9 bits (86), Expect = 0.003
Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 16/75 (21%)
Query: 127 LTNLNLSGNGFSGAIPLRSSHASELLVLPSYPP-MESLDLSGNALTGVLPSDIGNMGRLR 185
L L+ G L LP PP +ESL S N+LT LP ++ L
Sbjct: 40 AHELELNNLG--------------LSSLPELPPHLESLVASCNSLT-ELPELPQSLKSLL 84
Query: 186 LLNLANNHLSGKMPS 200
+ N LS P
Sbjct: 85 VDNNNLKALSDLPPL 99
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 37.5 bits (85), Expect = 0.004
Identities = 17/59 (28%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Query: 184 LRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSG 242
L L N LS +P L E L S N E+P+ L V N+L
Sbjct: 40 AHELELNNLGLS-SLPELPPHL---ESLVASCNSLT-ELPELPQ-SLKSLLVDNNNLKA 92
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.8 bits (126), Expect = 3e-08
Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 15/108 (13%)
Query: 453 FLDASLAFTAEELSRAPAEVLGRSSHGTLYKATL---DSGHMLTVKWLRVGLV--RHKKE 507
+LD L T E+ + LG + GT+ K + VK L+ K E
Sbjct: 2 YLDRKL-LTLED------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE 54
Query: 508 FAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDSLALHLY 555
E + + +P IV + + +L+ + + L +L
Sbjct: 55 LLAEANVMQQLDNPYIVRMIGICE---AESWMLVMEMAELGPLNKYLQ 99
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.0 bits (124), Expect = 6e-08
Identities = 16/87 (18%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
Query: 473 LGRSSHGTLYKATL---DSGHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRA 528
LG + G++ + + +K L+ G + +E +E + + + +P IV L
Sbjct: 17 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 76
Query: 529 YYWGPREQERLLLADYIQGDSLALHLY 555
+ + +L+ + G L L
Sbjct: 77 VC---QAEALMLVMEMAGGGPLHKFLV 100
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 52.0 bits (124), Expect = 6e-08
Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 4/87 (4%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHKKE-FAKEVKKIGSMRHPNIVPLRA 528
+VLG + + A + ++ +K + + K+ E+ + ++HPNIV L
Sbjct: 15 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVAL-- 72
Query: 529 YYWGPREQERLLLADYIQGDSLALHLY 555
L+ + G L +
Sbjct: 73 DDIYESGGHLYLIMQLVSGGELFDRIV 99
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.3 bits (122), Expect = 1e-07
Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 10/90 (11%)
Query: 471 EVLGRSSHGTLYKATLDS----GHMLTVKWLRVGLVRHK---KEFAKEVKKIGSMRHPNI 523
E LG S G + + D+ + VK L+ ++ +F +EV + S+ H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 524 VPLRAYYWGPREQERLLLADYIQGDSLALH 553
+ L ++ + SL
Sbjct: 74 IRLYGVVL---TPPMKMVTELAPLGSLLDR 100
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.9 bits (120), Expect = 1e-07
Identities = 34/178 (19%), Positives = 54/178 (30%), Gaps = 13/178 (7%)
Query: 53 ANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVT-----GTLPSLLEISPRLVTLD 107
+ IL LS N L + RL+ N+ +T GTLP L + L
Sbjct: 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQ 90
Query: 108 VSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD--- 164
+ +L G L+ + + P + +
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150
Query: 165 ----LSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQF 218
L+ N LT + + + L L L N L +P L + L GN +
Sbjct: 151 EKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.3 bits (103), Expect = 2e-05
Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Query: 162 SLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQF 218
++ LT LP D+ +L+L+ N L + L L L+L +
Sbjct: 14 EVNCDKRNLT-ALPPDLPK--DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAEL 67
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.6 bits (101), Expect = 3e-05
Identities = 36/179 (20%), Positives = 53/179 (29%), Gaps = 49/179 (27%)
Query: 7 STTLSVLNLSSNSLSGTLPTSLKSC---VILDLSRN------------------------ 39
++L+LS N L +L L+L R
Sbjct: 30 PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQL 89
Query: 40 ---------------------MISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDR 78
++ L+ L L N+L P L + +
Sbjct: 90 QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPK 149
Query: 79 LSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGF 137
L ++ NN++T LL L TL + N L IP FF S L L GN +
Sbjct: 150 LEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.6 bits (96), Expect = 1e-04
Identities = 38/205 (18%), Positives = 69/205 (33%), Gaps = 18/205 (8%)
Query: 50 NWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVS 109
+ A+ ++ L+ +LP + ++ N + + L RL L++
Sbjct: 7 SKVASHLEVNCDKRNLT-ALP--PDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLD 63
Query: 110 SNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSH------------ASELLVLPSY 157
+L D + +L+ + + + L L
Sbjct: 64 RAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGL 123
Query: 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQ 217
++ L L GN L + P + +L L+LANN+L+ L+ L L+ L L N
Sbjct: 124 GELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENS 183
Query: 218 FKGEIPDKL--SLKLNEFNVSYNDL 240
IP S L + N
Sbjct: 184 LY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 51.0 bits (121), Expect = 1e-07
Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHK--KEFAKEVKKIGSMRHPNIVPLRA 528
E +G ++G +YKA + G +K +R+ +E+ + ++H NIV L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL-- 65
Query: 529 YYWGPREQERLLLADYIQGDSLALHLY 555
Y ++ +L+ +++ D L
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLDV 92
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.9 bits (121), Expect = 2e-07
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 6/88 (6%)
Query: 471 EVLGRSSHGTLYKATL----DSGHMLTVKWL-RVGLVRHKKEFAKEVKKIGSMRHPNIVP 525
EV+GR G +Y TL VK L R+ + +F E + HPN++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 526 LRAYYWGPREQERLLLADYIQGDSLALH 553
L E L++ Y++ L
Sbjct: 93 LLGICLRS-EGSPLVVLPYMKHGDLRNF 119
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.4 bits (120), Expect = 2e-07
Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 6/89 (6%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHK---KEFAKEVKKIGSMRHPNIVPL 526
++LG S T+ A L + +K L + + +E + + HP V L
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 527 RAYYWGPREQERLLLADYIQGDSLALHLY 555
Y+ +++ Y + L ++
Sbjct: 74 --YFTFQDDEKLYFGLSYAKNGELLKYIR 100
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.6 bits (120), Expect = 2e-07
Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 9/92 (9%)
Query: 471 EVLGRSSHGTLYKATL------DSGHMLTVKWLR-VGLVRHKKEFAKEVKKIGSMRHPNI 523
LG+ S G +Y+ + + +K + +R + EF E + ++
Sbjct: 26 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 85
Query: 524 VPLRAYYWGPREQERLLLADYIQGDSLALHLY 555
V R + Q L++ + + L +L
Sbjct: 86 V--RLLGVVSQGQPTLVIMELMTRGDLKSYLR 115
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.4 bits (120), Expect = 2e-07
Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAY 529
E LGR G +++ S K+++V + KE+ + RH NI+ L +
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHL--H 67
Query: 530 YWGPREQERLLLADYIQGDSLALHL 554
+E +++ ++I G + +
Sbjct: 68 ESFESMEELVMIFEFISGLDIFERI 92
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.8 bits (118), Expect = 3e-07
Identities = 13/88 (14%), Positives = 28/88 (31%), Gaps = 8/88 (9%)
Query: 471 EVLGRSSHGTLYKATL----DSGHMLTVKWLRVGLVRHKKE-FAKEVKKIGSMRHPNIVP 525
+G G +++ + + +K + +E F +E + HP+IV
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 526 LRAYYWGPREQERLLLADYIQGDSLALH 553
L E ++ + L
Sbjct: 73 LIGVIT---ENPVWIIMELCTLGELRSF 97
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.8 bits (118), Expect = 3e-07
Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLT-----VKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIV 524
+V+G G +YK L + +K L+ G + + +F E +G H NI+
Sbjct: 13 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 72
Query: 525 PLRAYYWGPREQERLLLADYIQGDS 549
R + + +++ +Y++ +
Sbjct: 73 --RLEGVISKYKPMMIITEYMENGA 95
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.6 bits (118), Expect = 3e-07
Identities = 17/89 (19%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLR 527
+GR S T+YK ++ + L+ + ++ F +E + + ++HPNIV
Sbjct: 15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY 74
Query: 528 AYYWGPREQER--LLLADYIQGDSLALHL 554
+ + ++ +L+ + + +L +L
Sbjct: 75 DSWESTVKGKKCIVLVTELMTSGTLKTYL 103
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.8 bits (118), Expect = 4e-07
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 463 EELSRAPAEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHP 521
+E+S +V+G S G +Y+A L DSG ++ +K + + K+ +E++ + + H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHC 73
Query: 522 NIVPLRAYYWGPREQERL----LLADYIQGDSLALHLY 555
NIV LR +++ E++ L+ DY+ + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH 111
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.8 bits (118), Expect = 4e-07
Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 10/93 (10%)
Query: 471 EVLGRSSHGTLYKATL------DSGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSM-RHPN 522
+ LG + G + +AT D+ + VK L+ + ++ E+K + + H N
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 523 IVPLRAYYWGPREQERLLLADYIQGDSLALHLY 555
IV L L++ +Y L L
Sbjct: 89 IVNL--LGACTIGGPTLVITEYCCYGDLLNFLR 119
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.2 bits (117), Expect = 4e-07
Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 4/86 (4%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRA 528
+ LG ++G + A + + VK + + V + KE+ + H N+V
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF-- 68
Query: 529 YYWGPREQERLLLADYIQGDSLALHL 554
Y + L +Y G L +
Sbjct: 69 YGHRREGNIQYLFLEYCSGGELFDRI 94
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 48.9 bits (115), Expect = 5e-07
Identities = 31/215 (14%), Positives = 61/215 (28%), Gaps = 11/215 (5%)
Query: 27 SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLS-----GSLPNLTSQFDRLST 81
+L + + + ++ ++ ++ Q + L ++ L NL
Sbjct: 17 ALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTIEGVQYLNNLIGLEL--KD 72
Query: 82 FNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAI 141
I + + L + E+ L S + G S
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQ 132
Query: 142 PLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSE 201
L + P LS + + N+ +L L +N +S S
Sbjct: 133 VLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISD--ISP 190
Query: 202 LSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVS 236
L+ L L + L NQ P + L ++
Sbjct: 191 LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 38.5 bits (88), Expect = 0.001
Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 13/74 (17%)
Query: 118 PDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSD 177
+ LT L N S PL S LP+ + + L N ++ V P
Sbjct: 166 LTPLANLSKLTTLKADDNKISDISPLAS--------LPN---LIEVHLKNNQISDVSP-- 212
Query: 178 IGNMGRLRLLNLAN 191
+ N L ++ L N
Sbjct: 213 LANTSNLFIVTLTN 226
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.0 bits (116), Expect = 6e-07
Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Query: 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHK---KEFAKEVKKIGSM-RHPNIVP 525
+V+G + G + KA + G + R+ K ++FA E++ + + HPNI+
Sbjct: 16 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 75
Query: 526 LRAYYWGPREQERLLLADYIQGDSLALHLY 555
L L +Y +L L
Sbjct: 76 L--LGACEHRGYLYLAIEYAPHGNLLDFLR 103
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.0 bits (116), Expect = 6e-07
Identities = 15/87 (17%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRH------KKEFAKEVKKIGSMRHPNI 523
E LG + K +G K+++ + +++ +EV + ++HPN+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 524 VPLRAYYWGPREQERLLLADYIQGDSL 550
+ L + + + +L+ + + G L
Sbjct: 76 ITL--HEVYENKTDVILILELVAGGEL 100
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 49.0 bits (116), Expect = 7e-07
Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHK------KEFAKEVKKIGSMRHPNI 523
++GR G +Y D+G M +K L ++ K + + + P I
Sbjct: 10 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 69
Query: 524 VPLRAYYWGPREQERLLLADYIQGDSLALHL 554
V + Y + + D + G L HL
Sbjct: 70 VCM--SYAFHTPDKLSFILDLMNGGDLHYHL 98
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 47.3 bits (111), Expect = 1e-06
Identities = 36/204 (17%), Positives = 73/204 (35%), Gaps = 24/204 (11%)
Query: 13 LNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPN 71
NL S++ + + L S + + + I + +Q N+ L L+ NKL+
Sbjct: 29 DNLKKKSVTDAVTQNELNSIDQIIANNSDIK-SVQGIQYLP-NVTKLFLNGNKLTD---- 82
Query: 72 LTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLN 131
L S LK + +
Sbjct: 83 -IKPLANLKNLGWLFLDENKVKD------------LSSLKDLKKLKSLSLEHNGISDING 129
Query: 132 LSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLAN 191
L ++ L ++ +++ VL +++L L N ++ ++P + + +L+ L L+
Sbjct: 130 LVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSK 187
Query: 192 NHLSGKMPSELSKLGALEYLDLSG 215
NH+S L+ L L+ L+L
Sbjct: 188 NHISD--LRALAGLKNLDVLELFS 209
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.9 bits (113), Expect = 1e-06
Identities = 19/89 (21%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHKKE-----FAKEVKKIGSMRHPNIV 524
+ LG T+YKA ++ ++ +K +++G K+ +E+K + + HPNI+
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 525 PLRAYYWGPREQERLLLADYIQGDSLALH 553
L + L+ D+++ D +
Sbjct: 64 GL--LDAFGHKSNISLVFDFMETDLEVII 90
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 47.9 bits (113), Expect = 2e-06
Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNIVPLRA 528
LGR + +++A + + + VK L+ KK+ +E+K + ++R PNI+ L
Sbjct: 41 RKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLAD 97
Query: 529 YYWGPREQERLLLADYIQGDSLALHL 554
P + L+ +++
Sbjct: 98 IVKDPVSRTPALVFEHVNNTDFKQLY 123
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 47.5 bits (112), Expect = 2e-06
Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 9/92 (9%)
Query: 471 EVLGRSSHGTLYKATL------DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNI 523
+G + G +++A + M+ VK L+ + +F +E + +PNI
Sbjct: 19 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 78
Query: 524 VPLRAYYWGPREQERLLLADYIQGDSLALHLY 555
V + + LL +Y+ L L
Sbjct: 79 V--KLLGVCAVGKPMCLLFEYMAYGDLNEFLR 108
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.4 bits (112), Expect = 2e-06
Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHKKE---FAKEVKKIG-SMRHPNIVP 525
++LG+ S G ++ A + +K L+ +V + E + + + HP +
Sbjct: 8 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 67
Query: 526 LRAYYWGPREQERLLLADYIQGDSLALHL 554
+ + ++ + +Y+ G L H+
Sbjct: 68 M--FCTFQTKENLFFVMEYLNGGDLMYHI 94
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.8 bits (110), Expect = 4e-06
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLR 527
+G ++G++ A +G + VK L + H K +E++ + M+H N++ L
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 528 AYYWGPR---EQERLLLADYIQG 547
+ R E + L ++ G
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMG 106
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 43.9 bits (103), Expect = 4e-06
Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 15/118 (12%)
Query: 105 TLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164
L ++ L + + + +T+L+LS N P ++ ++ S +E++D
Sbjct: 2 VLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD 59
Query: 165 LSGNALTGVLPSDIGNMGRLRLLNLANNHL-SGKMPSELSKLGALEYLDLSGNQFKGE 221
+ N+ RL+ L L NN L L L L+L GN E
Sbjct: 60 ------------GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 40.1 bits (93), Expect = 9e-05
Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 4/103 (3%)
Query: 8 TTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKL-S 66
++ L+LS N L P + L + + + D L+ L L +N+L
Sbjct: 20 LLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGVANLPRLQELLLCNNRLQQ 79
Query: 67 GSLPNLTSQFDRLSTFNIRNNSVT---GTLPSLLEISPRLVTL 106
+ RL N++ NS+ G L E+ P + ++
Sbjct: 80 SAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 38.2 bits (88), Expect = 5e-04
Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 15/118 (12%)
Query: 81 TFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGA 140
++ + +T L L ++ + LD+S N+L+ P + AL L + +
Sbjct: 2 VLHLAHKDLT-VLCHLEQL-LLVTHLDLSHNRLRALPP----ALAALRCLEVLQASDNAL 55
Query: 141 IPLRSSHASELLVLPSYPPMESLDLSGNALTGV-LPSDIGNMGRLRLLNLANNHLSGK 197
+ + P ++ L L N L + + RL LLNL N L +
Sbjct: 56 ENVDGVA--------NLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 37.4 bits (86), Expect = 7e-04
Identities = 26/106 (24%), Positives = 38/106 (35%), Gaps = 5/106 (4%)
Query: 12 VLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLP 70
VL+L+ L+ L LDLS N + + LE+L S N L
Sbjct: 2 VLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPALAALR-CLEVLQASDNALENVDG 60
Query: 71 NLTSQFDRLSTFNIRNNSVTGT-LPSLLEISPRLVTLDVSSNQLKG 115
+ + NN + + L PRLV L++ N L
Sbjct: 61 VANLPRLQ--ELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 36.2 bits (83), Expect = 0.002
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 185 RLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPD 224
R+L+LA+ L+ L +L + +LDLS N+ + P
Sbjct: 1 RVLHLAHKDLTV--LCHLEQLLLVTHLDLSHNRLRALPPA 38
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 46.0 bits (108), Expect = 5e-06
Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAY 529
+G S G +Y T + +G + +K V + E K M+ +P
Sbjct: 13 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVK--TKHPQLHIESKIYKMMQGGVGIPTI-R 69
Query: 530 YWGPREQERLLLADYIQGDSLALHLY 555
+ G +++ + + L +
Sbjct: 70 WCGAEGDYNVMVMELLGPSLEDLFNF 95
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.0 bits (108), Expect = 5e-06
Identities = 15/92 (16%), Positives = 35/92 (38%), Gaps = 7/92 (7%)
Query: 471 EVLGRSSHGTLYKAT------LDSGHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNI 523
+ LGR + G + +A + + VK L+ G + E+K + + H
Sbjct: 19 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 78
Query: 524 VPLRAYYWGPREQERLLLADYIQGDSLALHLY 555
V +++ ++ + +L+ +L
Sbjct: 79 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 110
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.7 bits (108), Expect = 6e-06
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Query: 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHK---KEFAKEVKKIGSMRHPNIVPL 526
LG+ G +Y A S +L +K L + + +EV+ +RHPNI+ L
Sbjct: 12 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 71
Query: 527 RAYYWGPREQERLLLADYIQGDSLALHL 554
Y + L+ +Y ++ L
Sbjct: 72 --YGYFHDATRVYLILEYAPLGTVYREL 97
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.6 bits (107), Expect = 9e-06
Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 9/86 (10%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLT-----VKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIV 524
+VLG + GT+YK +K LR + KE E + S+ +P++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 525 PLRAYYWGPREQERLLLADYIQGDSL 550
L L+ + L
Sbjct: 75 RLLGIC---LTSTVQLITQLMPFGCL 97
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.5 bits (107), Expect = 9e-06
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHKKE---FAKEVKKIGSMRHPNIVPL 526
LG S G ++ +G +K L+ +V K+ E + + HP I+ +
Sbjct: 10 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 69
Query: 527 RAYYWGPREQERLLLADYIQGDSLALH 553
+ Q+ ++ DYI+G L
Sbjct: 70 --WGTFQDAQQIFMIMDYIEGGELFSL 94
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.5 bits (107), Expect = 1e-05
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHKKE---FAKEVKKIGSMRHPNIVPL 526
++LG+ + G + +G +K LR ++ K E E + + + RHP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 527 RAYYWGPREQERLLLADYIQGDSLALHL 554
Y + +Y G L HL
Sbjct: 71 --KYAFQTHDRLCFVMEYANGGELFFHL 96
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.9 bits (105), Expect = 1e-05
Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHK--KEFAKEVKKIGSMRHPNIVPLR 527
E +G ++G +YKA +G ++ +K +R+ +E+ + + HPNIV L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 528 AYYWGPREQERLLLADYIQGDSLALHLY 555
+ +L L L +
Sbjct: 68 DVI---HTENKLYLVFEFLHQDLKKFMD 92
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.8 bits (105), Expect = 1e-05
Identities = 13/81 (16%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLR-VGLVRHKKEFAKEVKKIGSMRHPNIVPLRA 528
+G ++G + A + + +K + + + +E+K + RH NI+ +
Sbjct: 14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 73
Query: 529 YYWGP--REQERLLLADYIQG 547
P + + + L ++ G
Sbjct: 74 IIRAPTIEQMKDVYLVTHLMG 94
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.7 bits (105), Expect = 2e-05
Identities = 14/88 (15%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHKKEFAKEVKKIG-SMRHPNIVPLRA 528
+VLG +G + + + +K +++ + +EV+ + + P+IV +
Sbjct: 18 QVLGLGINGKVLQIFNKRTQEKFALK-----MLQDCPKARREVELHWRASQCPHIVRIVD 72
Query: 529 YYWGPREQER--LLLADYIQGDSLALHL 554
Y + L++ + + G L +
Sbjct: 73 VYENLYAGRKCLLIVMECLDGGELFSRI 100
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.8 bits (105), Expect = 2e-05
Identities = 20/93 (21%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 471 EVLGRSSHGTLYKATL------DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPN 522
+VLG + G + AT + VK L+ ++ E+K + + H N
Sbjct: 43 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 102
Query: 523 IVPLRAYYWGPREQERLLLADYIQGDSLALHLY 555
IV L L+ +Y L +L
Sbjct: 103 IVNL--LGACTLSGPIYLIFEYCCYGDLLNYLR 133
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.9 bits (100), Expect = 2e-05
Identities = 30/134 (22%), Positives = 56/134 (41%), Gaps = 9/134 (6%)
Query: 33 ILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGT 92
LDL D+ +L+ S+ + +L + L + N+ NN +
Sbjct: 26 ALDLKGLRSDPDLVAQNI----DVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRL 80
Query: 93 --LPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASE 150
+ S+++ +P L L++S N+LK + + L L L GN S +S++ S
Sbjct: 81 DDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISA 140
Query: 151 LLVLPSYPPMESLD 164
+ +P + LD
Sbjct: 141 IRER--FPKLLRLD 152
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.0 bits (103), Expect = 2e-05
Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHK--KEFAKEVKKIGSMRHPNIVPLR 527
+ +G ++G + A +G + +K L K +E++ + MRH N++ L
Sbjct: 24 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 83
Query: 528 AYYWGPREQE 537
+ +
Sbjct: 84 DVFTPDETLD 93
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.1 bits (103), Expect = 3e-05
Identities = 14/95 (14%), Positives = 35/95 (36%), Gaps = 12/95 (12%)
Query: 471 EVLGRSSHGTLYKATL--------DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSM-RH 520
+ LG + G + A + + VK L+ + + E++ + + +H
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 521 PNIVPLRAYYWGPREQERLLLADYIQGDSLALHLY 555
NI+ ++ ++ +Y +L +L
Sbjct: 79 KNII--NLLGACTQDGPLYVIVEYASKGNLREYLQ 111
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.3 bits (101), Expect = 5e-05
Identities = 17/94 (18%), Positives = 40/94 (42%), Gaps = 9/94 (9%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVR--HKKEFAKEVKKIGSMRHPNIVPL- 526
+G+ + G ++KA +G + +K + + + +E+K + ++H N+V L
Sbjct: 16 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 75
Query: 527 -----RAYYWGPREQERLLLADYIQGDSLALHLY 555
+A + + L+ D+ + D L
Sbjct: 76 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 109
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 43.3 bits (100), Expect = 5e-05
Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 11/84 (13%)
Query: 157 YPPMESLDLSGNALTGVLPSDIGNM------GRLRLLNLANNHLSGKMPSEL-----SKL 205
+P + L L+ L+ + + + L+ L L N + L K+
Sbjct: 242 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKM 301
Query: 206 GALEYLDLSGNQFKGEIPDKLSLK 229
L +L+L+GN+F E ++
Sbjct: 302 PDLLFLELNGNRFSEEDDVVDEIR 325
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (100), Expect = 5e-05
Identities = 16/86 (18%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHK--KEFAKEVKKIGSMRHPNIVPLR 527
E +G ++GT++KA ++ ++ +K +R+ +E+ + ++H NIV R
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIV--R 65
Query: 528 AYYWGPREQERLLLADYIQGDSLALH 553
+ +++ L+ ++ D
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQDLKKYF 91
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.2 bits (98), Expect = 9e-05
Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Query: 471 EVLGRSSHGTLYKAT--LDSGHMLTVKWLRV-----GLVRHKKEFAKEVKKIGSMRHPNI 523
+G ++G ++KA + G + +K +RV G+ ++ + + HPN+
Sbjct: 13 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 72
Query: 524 VPLRAYYWGPREQERLLL 541
V L R L
Sbjct: 73 VRLFDVCTVSRTDRETKL 90
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.6 bits (97), Expect = 1e-04
Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 11/93 (11%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLR------VGLVRHKKEFAKEVKKIGSMR--HP 521
+LG G++Y + + +K + G + + EV + +
Sbjct: 10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 522 NIVPLRAYYWGPREQERLLLADYIQGDSLALHL 554
++ L W R +L+ + +
Sbjct: 70 GVIRL--LDWFERPDSFVLILERPEPVQDLFDF 100
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.5 bits (96), Expect = 2e-04
Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 7/92 (7%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLR 527
+ +G + G + A + +K L H K +E+ + + H NI+ L
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 528 AYYWGPR----EQERLLLADYIQGDSLALHLY 555
+ + Q+ L+ + + + +
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 114
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.9 bits (92), Expect = 2e-04
Identities = 14/79 (17%), Positives = 28/79 (35%), Gaps = 1/79 (1%)
Query: 180 NMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYND 239
N R R L+L + + + + L + +D S N+ + L +L V+ N
Sbjct: 16 NAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNR 74
Query: 240 LSGPIPENLRNFPKSSFHP 258
+ + P +
Sbjct: 75 ICRIGEGLDQALPDLTELI 93
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.5 bits (83), Expect = 0.003
Identities = 27/153 (17%), Positives = 47/153 (30%), Gaps = 11/153 (7%)
Query: 14 NLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLT 73
L + T + LDL I I ++ + +D S N++ L
Sbjct: 6 ELIEQAAQYTNAVRDRE---LDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLDG-F 59
Query: 74 SQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLS 133
RL T + NN + L + P L L +++N L + +S+
Sbjct: 60 PLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCI 119
Query: 134 GNGFSGAIPLRSSHASELLVLPSYPPMESLDLS 166
+ V+ P + LD
Sbjct: 120 LRNPVTNKKHYRLY-----VIYKVPQVRVLDFQ 147
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 40.6 bits (94), Expect = 3e-04
Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHKKE---FAKEVKKIGSMRHPNIVPL 526
+ LG S G + +SG+ +K L V K+ E + + ++ P +V L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 527 RAYYW 531
+
Sbjct: 107 EFSFK 111
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 39.6 bits (91), Expect = 3e-04
Identities = 38/200 (19%), Positives = 73/200 (36%), Gaps = 24/200 (12%)
Query: 13 LNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPN 71
L +++ T+ + L L R I I ++ NL ++ S+N+L+
Sbjct: 23 TVLGKTNVTDTVSQTDLDQVTTLQADRLGIK-SIDGVEYLN-NLTQINFSNNQLTDI--- 77
Query: 72 LTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLN 131
+ T + + + ++ ++ + D + L L
Sbjct: 78 ---TPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLE 134
Query: 132 LSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLAN 191
LS N S L ++ L+ S N +T + P + N+ L L++++
Sbjct: 135 LSSNTISDISALSGLT-----------SLQQLNFSSNQVTDLKP--LANLTTLERLDISS 181
Query: 192 NHLSGKMPSELSKLGALEYL 211
N +S S L+KL LE L
Sbjct: 182 NKVSD--ISVLAKLTNLESL 199
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.2 bits (93), Expect = 4e-04
Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Query: 471 EVLGRSSHGTLYKATL----DSGHMLTVKWLRVGLVRHK----KEFAKEVKKIGSMRHPN 522
+VLG ++G ++ D+G + +K L+ + K + E + + +R
Sbjct: 30 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 89
Query: 523 IVPLRAYYWGPREQERLLLADYIQGDSLALHLY 555
+ +Y E + L+ DYI G L HL
Sbjct: 90 FLV-TLHYAFQTETKLHLILDYINGGELFTHLS 121
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 38.9 bits (90), Expect = 0.001
Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 13/95 (13%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLV---------RHKKEFAKEVKKIGSMR- 519
E+LGR + + + VK + V ++ KEV + +
Sbjct: 9 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 68
Query: 520 HPNIVPLRAYYWGPREQERLLLADYIQGDSLALHL 554
HPNI+ L L+ D ++ L +L
Sbjct: 69 HPNIIQL--KDTYETNTFFFLVFDLMKKGELFDYL 101
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (86), Expect = 0.002
Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 3/43 (6%)
Query: 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSL 96
ILD+S ++ +L + N LP+L
Sbjct: 202 GPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK---KLPTL 241
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.2 bits (84), Expect = 0.004
Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Query: 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPS 200
LD+S + + + N+ +LR + N K+P+
Sbjct: 201 SGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL---KKLPT 240
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 38.3 bits (88), Expect = 0.002
Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 4/84 (4%)
Query: 471 EVLGRSSHGTLYKAT-LDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAY 529
+G S G +++ T L + + +K+ + E + + +P Y
Sbjct: 11 RRIGEGSFGVIFEGTNLLNNQQVAIKFEP--RRSDAPQLRDEYRTYKLLAGCTGIP-NVY 67
Query: 530 YWGPREQERLLLADYIQGDSLALH 553
Y+G +L+ D + L
Sbjct: 68 YFGQEGLHNVLVIDLLGPSLEDLL 91
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 37.1 bits (85), Expect = 0.003
Identities = 9/67 (13%), Positives = 21/67 (31%), Gaps = 10/67 (14%)
Query: 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKK----------EFAKEVKKIGSMRH 520
+++G ++ + VK+ +VG KK F+ +
Sbjct: 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65
Query: 521 PNIVPLR 527
+ L+
Sbjct: 66 RALQKLQ 72
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 555 | |||
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.95 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.94 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.93 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.92 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.91 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.91 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.9 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.84 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.83 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.82 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.78 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.76 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.76 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.76 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.75 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.75 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.75 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.71 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.71 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.7 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.69 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.66 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.56 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.55 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 99.54 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 99.53 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 99.51 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 99.51 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.5 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 99.5 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.5 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 99.49 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 99.49 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.48 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 99.48 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 99.48 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 99.48 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 99.47 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 99.47 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 99.47 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 99.47 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.46 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 99.46 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 99.46 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 99.45 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 99.44 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 99.43 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 99.43 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.43 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 99.43 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 99.42 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.41 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.41 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.4 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 99.39 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 99.39 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 99.39 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 99.39 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 99.39 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 99.38 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.38 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 99.37 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 99.37 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 99.37 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 99.36 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 99.32 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.32 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.32 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 99.31 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.31 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 99.31 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.31 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 99.3 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 99.26 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 99.26 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.25 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 99.25 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.23 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 99.22 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 99.22 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.22 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 99.22 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 99.2 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.15 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 99.14 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.12 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.05 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.05 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 99.05 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.05 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.05 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.04 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 99.03 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.03 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 98.83 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 98.83 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 98.76 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.33 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 98.32 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.29 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 98.24 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.95 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.87 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 97.26 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 97.26 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 83.91 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 81.01 |
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.95 E-value=3.6e-28 Score=240.81 Aligned_cols=247 Identities=30% Similarity=0.447 Sum_probs=216.1
Q ss_pred CCCEEECCCCcCCCC--CCC---CCCCCCEEEcCC-CcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 9 TLSVLNLSSNSLSGT--LPT---SLKSCVILDLSR-NMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~--~~~---~l~~L~~L~L~~-N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
+++.|+|++|++++. +|. .+++|++|+|++ |++++.+|..+..+++|++|+|++|++.+..+..+..+..|+.+
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 130 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhccc
Confidence 589999999999984 665 467889999986 88998888888889999999999999999999999999999999
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCC-CeEEccCCcccccCCcCccccccccccCCCCCcC
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMAL-TNLNLSGNGFSGAIPLRSSHASELLVLPSYPPME 161 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L-~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~ 161 (555)
++++|.+.+.+|..+..+++|+.+++++|.+.+.+|..+..+..+ +.+++++|++++..|..+..+ .+.
T Consensus 131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l----------~~~ 200 (313)
T d1ogqa_ 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL----------NLA 200 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC----------CCS
T ss_pred ccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccccccccccccccc----------ccc
Confidence 999999999999999999999999999999999999999988876 889999999999888776654 345
Q ss_pred EEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCC
Q 048796 162 SLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYND 239 (555)
Q Consensus 162 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~ 239 (555)
.++++.|.+.+.+|..+..+++|+.+++++|.+.+.++ .+..+++|+.|+|++|+|+|.+|..+. ++|+.||+++|+
T Consensus 201 ~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~ 279 (313)
T d1ogqa_ 201 FVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNN 279 (313)
T ss_dssp EEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSE
T ss_pred cccccccccccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCc
Confidence 79999999999999999999999999999999997655 688899999999999999999999887 889999999999
Q ss_pred CCCCcCcc--ccCCCCCCCCCCCcccccCC
Q 048796 240 LSGPIPEN--LRNFPKSSFHPGNALLIFPD 267 (555)
Q Consensus 240 l~~~~p~~--l~~~~~~~~~~~n~~~~~~~ 267 (555)
|+|.+|.. +..+....+. +|+.+|..+
T Consensus 280 l~g~iP~~~~L~~L~~l~l~-~N~~l~g~p 308 (313)
T d1ogqa_ 280 LCGEIPQGGNLQRFDVSAYA-NNKCLCGSP 308 (313)
T ss_dssp EEEECCCSTTGGGSCGGGTC-SSSEEESTT
T ss_pred ccccCCCcccCCCCCHHHhC-CCccccCCC
Confidence 99999964 3344433443 788788643
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.94 E-value=1.3e-27 Score=236.71 Aligned_cols=228 Identities=29% Similarity=0.403 Sum_probs=205.4
Q ss_pred CcCCCCCCEEECCC-CcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCc
Q 048796 4 GINSTTLSVLNLSS-NSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRL 79 (555)
Q Consensus 4 ~~n~~~L~~L~Ls~-N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L 79 (555)
..++++|++|+|++ |+++|.+|.. +++|++|+|++|+|.+..+..+..+.+|+.+++++|.+.+.+|..+..++.|
T Consensus 72 l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L 151 (313)
T d1ogqa_ 72 LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNL 151 (313)
T ss_dssp GGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTC
T ss_pred HhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCccc
Confidence 45889999999996 8999999865 5688999999999999888888888899999999999999999999999999
Q ss_pred cEEEeeCCcCCCCCchhccCCCCc-cEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCC
Q 048796 80 STFNIRNNSVTGTLPSLLEISPRL-VTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYP 158 (555)
Q Consensus 80 ~~L~L~~N~l~~~~~~~l~~l~~L-~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~ 158 (555)
+++++++|.+.+.+|..+..+.++ +.+++++|++++..+..+..+.. ..++++++.+.+.+|..+..+ +
T Consensus 152 ~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~-~~l~l~~~~~~~~~~~~~~~~---------~ 221 (313)
T d1ogqa_ 152 VGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNL-AFVDLSRNMLEGDASVLFGSD---------K 221 (313)
T ss_dssp CEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCC-SEEECCSSEEEECCGGGCCTT---------S
T ss_pred ceeecccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccc---------c
Confidence 999999999999999988888776 89999999999888888887755 479999999999888877766 8
Q ss_pred CcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEecc
Q 048796 159 PMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSY 237 (555)
Q Consensus 159 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~ 237 (555)
+|+.+++++|.+++.++ .+..+++|+.|+|++|+|+|.+|..++.+++|++|||++|+|+|.+|.... .+|+.+++++
T Consensus 222 ~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~ 300 (313)
T d1ogqa_ 222 NTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYAN 300 (313)
T ss_dssp CCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCS
T ss_pred ccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCC
Confidence 99999999999997655 688899999999999999999999999999999999999999999996433 7899999999
Q ss_pred CC-CCC
Q 048796 238 ND-LSG 242 (555)
Q Consensus 238 N~-l~~ 242 (555)
|+ ++|
T Consensus 301 N~~l~g 306 (313)
T d1ogqa_ 301 NKCLCG 306 (313)
T ss_dssp SSEEES
T ss_pred CccccC
Confidence 98 555
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=2.7e-25 Score=216.65 Aligned_cols=225 Identities=21% Similarity=0.173 Sum_probs=201.8
Q ss_pred CEEECCCCcCCCCCCCCCC-CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEee-CCc
Q 048796 11 SVLNLSSNSLSGTLPTSLK-SCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIR-NNS 88 (555)
Q Consensus 11 ~~L~Ls~N~l~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~-~N~ 88 (555)
..+++++++++ .+|..++ ++++|+|++|+|+.+++..|..+++|++|++++|.+....+..+..+..++.+... .|.
T Consensus 14 ~~v~c~~~~L~-~iP~~ip~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~ 92 (284)
T d1ozna_ 14 VTTSCPQQGLQ-AVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 92 (284)
T ss_dssp CEEECCSSCCS-SCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTT
T ss_pred eEEEcCCCCCC-ccCCCCCCCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence 46788888888 6676655 78999999999999888889999999999999999998888888999999998775 567
Q ss_pred CCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCC
Q 048796 89 VTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGN 168 (555)
Q Consensus 89 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N 168 (555)
++...+..|..+++|++|++++|.+....+..+....+|+.+++++|.+++..+..+..+ ++|+.|+|++|
T Consensus 93 ~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~---------~~L~~L~l~~N 163 (284)
T d1ozna_ 93 LRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDL---------GNLTHLFLHGN 163 (284)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---------TTCCEEECCSS
T ss_pred cccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccc---------cchhhcccccC
Confidence 887778899999999999999999987777788889999999999999997766666655 88999999999
Q ss_pred cCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcC
Q 048796 169 ALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 169 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p 245 (555)
.|++..+..|.++++|+.+++++|++++..|..|..+++|++||+++|.+++..+..+. .+|+.|++++|++.|.++
T Consensus 164 ~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~ 242 (284)
T d1ozna_ 164 RISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (284)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred cccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCcc
Confidence 99998899999999999999999999999999999999999999999999987777776 789999999999998765
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=3.7e-25 Score=215.76 Aligned_cols=235 Identities=26% Similarity=0.263 Sum_probs=204.7
Q ss_pred CCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEcc-CCcCCCCCCccccCCCCccEEE
Q 048796 8 TTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLS-SNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls-~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
+++++|+|++|+|+...+.. +++|++|++++|+|..+....+.....++.++.. .|.++...+..|.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 46899999999999655544 5678999999999999888888888889998875 5567777788899999999999
Q ss_pred eeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEE
Q 048796 84 IRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESL 163 (555)
Q Consensus 84 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L 163 (555)
+++|.+....+..+..+.+|+.+++++|+|++..+..|..+.+|+.|++++|.+++..+..+..+ ++|+++
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l---------~~L~~l 182 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGL---------HSLDRL 182 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTC---------TTCCEE
T ss_pred cCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccc---------cccchh
Confidence 99999987778888999999999999999997777888899999999999999998777777766 999999
Q ss_pred EccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEeccCCCCC
Q 048796 164 DLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSYNDLSG 242 (555)
Q Consensus 164 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~N~l~~ 242 (555)
++++|++++..|..|..+++|++|++++|++.+..+..|..+++|++|++++|.+.+..+..+. ..++.+....+++.|
T Consensus 183 ~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~~~~l~~~l~~~~~~~~~~~C 262 (284)
T d1ozna_ 183 LLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPC 262 (284)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBE
T ss_pred hhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCccchHHHHHHHhCcCCCCceEe
Confidence 9999999999999999999999999999999999999999999999999999999976554333 445666677788888
Q ss_pred CcCccccCC
Q 048796 243 PIPENLRNF 251 (555)
Q Consensus 243 ~~p~~l~~~ 251 (555)
..|..+++.
T Consensus 263 ~~p~~l~g~ 271 (284)
T d1ozna_ 263 SLPQRLAGR 271 (284)
T ss_dssp EESGGGTTC
T ss_pred CCchHHcCC
Confidence 888877653
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=1.4e-23 Score=202.38 Aligned_cols=199 Identities=26% Similarity=0.309 Sum_probs=121.1
Q ss_pred CCCCCEEECCCCcCCCCCCCCCC-CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEee
Q 048796 7 STTLSVLNLSSNSLSGTLPTSLK-SCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIR 85 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 85 (555)
...+.++|.++++|+ .+|..++ ++++|+|++|+|+++.+..|..+++|++|+|++|.|+. ++ .++.+++|++|+|+
T Consensus 9 ~~~~~~v~C~~~~L~-~iP~~lp~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~Ls 85 (266)
T d1p9ag_ 9 VASHLEVNCDKRNLT-ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTLDLS 85 (266)
T ss_dssp STTCCEEECTTSCCS-SCCSCCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEEECC
T ss_pred cCCCeEEEccCCCCC-eeCcCcCcCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-cccccccccccccc
Confidence 345667788888887 4666654 67888888888877776777777778888888887763 32 24567777777777
Q ss_pred CCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEc
Q 048796 86 NNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDL 165 (555)
Q Consensus 86 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~L 165 (555)
+|+++. .+..+..+++|+.|++++|.+....+..+..+.+++.|++++|.++...+..+..+ +.|+.|++
T Consensus 86 ~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l---------~~l~~l~l 155 (266)
T d1p9ag_ 86 HNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPT---------PKLEKLSL 155 (266)
T ss_dssp SSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTC---------TTCCEEEC
T ss_pred cccccc-cccccccccccccccccccccceeeccccccccccccccccccccceecccccccc---------ccchhccc
Confidence 777763 34556666777777777777665555555555666666666665554433333333 44555555
Q ss_pred cCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCC
Q 048796 166 SGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFK 219 (555)
Q Consensus 166 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 219 (555)
++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|.+.
T Consensus 156 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 156 ANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp TTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 555555444444555555555555555555 34444444444555555444443
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=1.9e-23 Score=201.44 Aligned_cols=202 Identities=25% Similarity=0.208 Sum_probs=176.4
Q ss_pred CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEE
Q 048796 27 SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTL 106 (555)
Q Consensus 27 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L 106 (555)
...++.+++.++++|+.+++++. ++|++|+|++|.|++..+..|.++++|++|+|++|+|+.. + .++.+++|++|
T Consensus 8 ~~~~~~~v~C~~~~L~~iP~~lp---~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L 82 (266)
T d1p9ag_ 8 KVASHLEVNCDKRNLTALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-Q-VDGTLPVLGTL 82 (266)
T ss_dssp CSTTCCEEECTTSCCSSCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-E-CCSCCTTCCEE
T ss_pred ccCCCeEEEccCCCCCeeCcCcC---cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccc-c-ccccccccccc
Confidence 34567788999999998765543 4799999999999977778899999999999999999843 3 36789999999
Q ss_pred EcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccce
Q 048796 107 DVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRL 186 (555)
Q Consensus 107 ~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 186 (555)
+|++|+++ ..+..+..+++|+.|++++|.+....+..+..+ .+++.|++++|.++...+..+..+++|+.
T Consensus 83 ~Ls~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l---------~~l~~L~l~~n~l~~l~~~~~~~l~~l~~ 152 (266)
T d1p9ag_ 83 DLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGL---------GELQELYLKGNELKTLPPGLLTPTPKLEK 152 (266)
T ss_dssp ECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTC---------TTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred cccccccc-ccccccccccccccccccccccceeeccccccc---------cccccccccccccceeccccccccccchh
Confidence 99999998 567788999999999999999987666655555 88999999999999888888999999999
Q ss_pred eecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCc
Q 048796 187 LNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPI 244 (555)
Q Consensus 187 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~ 244 (555)
|++++|+|++..+..|..+++|++|||++|+|+ .+|..+. .+|+.|++++|++.|.+
T Consensus 153 l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~CdC 211 (266)
T d1p9ag_ 153 LSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (266)
T ss_dssp EECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred cccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCCCc
Confidence 999999999888888999999999999999999 6776555 78999999999998754
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.90 E-value=2.7e-22 Score=197.28 Aligned_cols=220 Identities=23% Similarity=0.298 Sum_probs=148.3
Q ss_pred CCCEEECCCCcCCCCCCCCC-CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 9 TLSVLNLSSNSLSGTLPTSL-KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
.++.+|.++++++ .+|..+ +++++|+|++|+|+.+.+..|..+++|++|++++|.+....|..|.++++|++|++++|
T Consensus 11 ~~~~~~C~~~~L~-~lP~~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n 89 (305)
T d1xkua_ 11 HLRVVQCSDLGLE-KVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 89 (305)
T ss_dssp ETTEEECTTSCCC-SCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred cCCEEEecCCCCC-ccCCCCCCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCC
Confidence 3456666666666 344443 46666666666666666556666666666666666666555666666666666666666
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCC--------------------------CCchhhhCCCCCCeEEccCCcccccC
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKG--------------------------PIPDNFFSSMALTNLNLSGNGFSGAI 141 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~--------------------------~~~~~~~~~~~L~~L~Ls~N~l~~~~ 141 (555)
+|+.. |..+ ...+..|++..|.+.. ..+..+..+++|+.+++++|.+.. +
T Consensus 90 ~l~~l-~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~-l 165 (305)
T d1xkua_ 90 QLKEL-PEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-I 165 (305)
T ss_dssp CCSBC-CSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-C
T ss_pred ccCcC-ccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccc-c
Confidence 66532 2211 2344455555544432 223355667889999999998873 3
Q ss_pred CcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCC
Q 048796 142 PLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGE 221 (555)
Q Consensus 142 p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 221 (555)
|..+ +++|+.|++++|.++...+..|..++.++.|++++|.+++..+..+.++++|++|+|++|.|+ .
T Consensus 166 ~~~~-----------~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~ 233 (305)
T d1xkua_ 166 PQGL-----------PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-K 233 (305)
T ss_dssp CSSC-----------CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-S
T ss_pred Cccc-----------CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-c
Confidence 3221 267888888888888888888888888888888888888777788888888888888888888 4
Q ss_pred CChhhh--cCCCEEEeccCCCCCCcC
Q 048796 222 IPDKLS--LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 222 ~p~~~~--~~L~~L~ls~N~l~~~~p 245 (555)
+|..+. ++|+.|++++|+|+....
T Consensus 234 lp~~l~~l~~L~~L~Ls~N~i~~i~~ 259 (305)
T d1xkua_ 234 VPGGLADHKYIQVVYLHNNNISAIGS 259 (305)
T ss_dssp CCTTTTTCSSCCEEECCSSCCCCCCT
T ss_pred cccccccccCCCEEECCCCccCccCh
Confidence 565555 788888888888875433
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.84 E-value=4.6e-20 Score=186.74 Aligned_cols=232 Identities=27% Similarity=0.354 Sum_probs=154.4
Q ss_pred CCCCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCC---------------
Q 048796 6 NSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSL--------------- 69 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~--------------- 69 (555)
++++|++|+|++|+|++..+ ..+++|++|+|++|.|.++.+ +..+++|+.|++++|.+++..
T Consensus 64 ~L~nL~~L~Ls~N~l~~l~~l~~L~~L~~L~L~~n~i~~i~~--l~~l~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (384)
T d2omza2 64 YLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSS 141 (384)
T ss_dssp GCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGTTCTTCSEEEEEE
T ss_pred cCCCCCEEeCcCCcCCCCccccCCcccccccccccccccccc--cccccccccccccccccccccccccccccccccccc
Confidence 46778888888888875432 456777888888888776542 456667777777776654210
Q ss_pred ------------------------------------------------CccccCCCCccEEEeeCCcCCCCCchhccCCC
Q 048796 70 ------------------------------------------------PNLTSQFDRLSTFNIRNNSVTGTLPSLLEISP 101 (555)
Q Consensus 70 ------------------------------------------------~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~ 101 (555)
...+..+++++.+++++|.+++..+ +..++
T Consensus 142 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~ 219 (384)
T d2omza2 142 NTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP--LGILT 219 (384)
T ss_dssp EEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GGGCT
T ss_pred ccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccceeeccCCccCCCCc--ccccC
Confidence 1123445667778888888776544 45566
Q ss_pred CccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcccc-------------ccccccCCCCCcCEEEccCC
Q 048796 102 RLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHA-------------SELLVLPSYPPMESLDLSGN 168 (555)
Q Consensus 102 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~-------------~~l~~l~~~~~L~~L~Ls~N 168 (555)
+|+.|++++|+++. + +.+..+++|+.|++++|.+++..+ +..+ ..+..+..++.++.+.++.|
T Consensus 220 ~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~~~n 295 (384)
T d2omza2 220 NLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 295 (384)
T ss_dssp TCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSS
T ss_pred CCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCCc--ccccccCCEeeccCcccCCCCcccccccccccccccc
Confidence 77788888777763 2 356677777777777777765433 2211 11112233455566666666
Q ss_pred cCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCc
Q 048796 169 ALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPE 246 (555)
Q Consensus 169 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~ 246 (555)
.+++. ..+..+++++.|++++|++++.. .+..+++|++|++++|+|++ ++ .+. ++|+.|++++|++++..|
T Consensus 296 ~l~~~--~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~- 368 (384)
T d2omza2 296 QLEDI--SPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP- 368 (384)
T ss_dssp CCSCC--GGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG-
T ss_pred ccccc--cccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh-
Confidence 66542 34677888999999999998653 37888999999999999985 33 344 789999999999987654
Q ss_pred cccCCCC
Q 048796 247 NLRNFPK 253 (555)
Q Consensus 247 ~l~~~~~ 253 (555)
+.+++.
T Consensus 369 -l~~l~~ 374 (384)
T d2omza2 369 -LANLTR 374 (384)
T ss_dssp -GTTCTT
T ss_pred -hccCCC
Confidence 444443
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.83 E-value=2.2e-19 Score=181.67 Aligned_cols=228 Identities=20% Similarity=0.237 Sum_probs=163.8
Q ss_pred CCCCCCEEECCCCcCCCCC-CCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 6 NSTTLSVLNLSSNSLSGTL-PTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++.+|++|++++|+|+... .+.+++|++|+|++|+|+++.+ +..+++|++|+|++|.+.+.. .++.+++|+.|++
T Consensus 42 ~l~~l~~L~l~~~~I~~l~gl~~L~nL~~L~Ls~N~l~~l~~--l~~L~~L~~L~L~~n~i~~i~--~l~~l~~L~~L~~ 117 (384)
T d2omza2 42 DLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADIT--PLANLTNLTGLTL 117 (384)
T ss_dssp HHTTCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG--GGTTCTTCCEEEC
T ss_pred HhCCCCEEECCCCCCCCccccccCCCCCEEeCcCCcCCCCcc--ccCCccccccccccccccccc--ccccccccccccc
Confidence 4568999999999998532 2468899999999999998754 777889999999999998543 3789999999999
Q ss_pred eCCcCCCCC---------------------------------------------------------------chhccCCC
Q 048796 85 RNNSVTGTL---------------------------------------------------------------PSLLEISP 101 (555)
Q Consensus 85 ~~N~l~~~~---------------------------------------------------------------~~~l~~l~ 101 (555)
++|.+++.. ...+..++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 197 (384)
T d2omza2 118 FNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 197 (384)
T ss_dssp CSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccccccccccccccc
Confidence 998876321 12345568
Q ss_pred CccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCc
Q 048796 102 RLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNM 181 (555)
Q Consensus 102 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l 181 (555)
+++.+++++|.+++..| +..+.+|+.|++++|.++.. + .+..+ ++|+.|++++|.+++.. .+..+
T Consensus 198 ~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~~-~-~l~~l---------~~L~~L~l~~n~l~~~~--~~~~~ 262 (384)
T d2omza2 198 NLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI-G-TLASL---------TNLTDLDLANNQISNLA--PLSGL 262 (384)
T ss_dssp TCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-G-GGGGC---------TTCSEEECCSSCCCCCG--GGTTC
T ss_pred ccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCCc-c-hhhcc---------cccchhccccCccCCCC--ccccc
Confidence 89999999999986544 56678999999999998753 2 22222 44555555555554332 24444
Q ss_pred cccceeecccccccCCC--------------------chhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCC
Q 048796 182 GRLRLLNLANNHLSGKM--------------------PSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLS 241 (555)
Q Consensus 182 ~~L~~L~L~~N~l~~~~--------------------~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~ 241 (555)
++|+.|++++|++++.. ...+..+++++.|++++|++++..+-...++|+.|++++|+++
T Consensus 263 ~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~~l~~l~~l~~L~~L~L~~n~l~ 342 (384)
T d2omza2 263 TKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVS 342 (384)
T ss_dssp TTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCC
T ss_pred ccCCEeeccCcccCCCCccccccccccccccccccccccccchhcccCeEECCCCCCCCCcccccCCCCCEEECCCCCCC
Confidence 44555555444443221 2346778899999999999997654333389999999999998
Q ss_pred CCcCccccCCCCC
Q 048796 242 GPIPENLRNFPKS 254 (555)
Q Consensus 242 ~~~p~~l~~~~~~ 254 (555)
+. + .+..++..
T Consensus 343 ~l-~-~l~~l~~L 353 (384)
T d2omza2 343 DV-S-SLANLTNI 353 (384)
T ss_dssp CC-G-GGGGCTTC
T ss_pred CC-h-hHcCCCCC
Confidence 63 3 46555543
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.82 E-value=5e-19 Score=173.55 Aligned_cols=215 Identities=20% Similarity=0.249 Sum_probs=174.4
Q ss_pred CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcC
Q 048796 30 SCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVS 109 (555)
Q Consensus 30 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 109 (555)
..+.+|.++++++.++..+. ++|++|+|++|+|+...+..|.++++|++|++++|.+....|..|..+++|+.|+++
T Consensus 11 ~~~~~~C~~~~L~~lP~~l~---~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 11 HLRVVQCSDLGLEKVPKDLP---PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp ETTEEECTTSCCCSCCCSCC---TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCEEEecCCCCCccCCCCC---CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 45789999999998876553 479999999999996666789999999999999999998888899999999999999
Q ss_pred CCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccc-----------------cccccCCCCCcCEEEccCCcCCC
Q 048796 110 SNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHAS-----------------ELLVLPSYPPMESLDLSGNALTG 172 (555)
Q Consensus 110 ~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~-----------------~l~~l~~~~~L~~L~Ls~N~l~~ 172 (555)
+|+++ .+|..+ ...+..|.+.+|.+.+..+..+.... ....+..+++|+.+++++|.++.
T Consensus 88 ~n~l~-~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~ 164 (305)
T d1xkua_ 88 KNQLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 164 (305)
T ss_dssp SSCCS-BCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCccC-cCccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccc
Confidence 99998 555533 45788999999988764332222111 01123456889999999999985
Q ss_pred cCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccC
Q 048796 173 VLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRN 250 (555)
Q Consensus 173 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~ 250 (555)
+|..+ +++|+.|++++|.+++..+..+..++.++.|++++|.+++..+..+. ++|+.|++++|.|+. +|.++..
T Consensus 165 -l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~-lp~~l~~ 240 (305)
T d1xkua_ 165 -IPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLAD 240 (305)
T ss_dssp -CCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSS-CCTTTTT
T ss_pred -cCccc--CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeecccccccc-ccccccc
Confidence 44433 57899999999999999999999999999999999999988777766 899999999999984 5777766
Q ss_pred CCCC
Q 048796 251 FPKS 254 (555)
Q Consensus 251 ~~~~ 254 (555)
++..
T Consensus 241 l~~L 244 (305)
T d1xkua_ 241 HKYI 244 (305)
T ss_dssp CSSC
T ss_pred ccCC
Confidence 6544
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.78 E-value=6.6e-19 Score=164.95 Aligned_cols=206 Identities=17% Similarity=0.236 Sum_probs=158.1
Q ss_pred CCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 9 TLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
++..++++.+++++.+. ..+.+|+.|++.+|+|+.+ . .+..+++|++|+|++|.+++..+ +..+++|+.|++++|
T Consensus 20 ~~~~~~l~~~~~~d~~~~~~l~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n 95 (227)
T d1h6ua2 20 NAIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGN 95 (227)
T ss_dssp HHHHHHTTCSSTTSEECHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSC
T ss_pred HHHHHHhCCCCcCCcCCHHHcCCcCEEECCCCCCCcc-h-hHhcCCCCcEeecCCceeecccc--ccccccccccccccc
Confidence 34456777888887554 4578899999999999865 3 35678899999999999985433 788999999999999
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccC
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSG 167 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~ 167 (555)
.++.. ..+..+++|+.+++++|...+. ..+.....+..+.++++.+....+ +.. +++|+.|++++
T Consensus 96 ~~~~i--~~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~--~~~---------~~~L~~L~l~~ 160 (227)
T d1h6ua2 96 PLKNV--SAIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNISP--LAG---------LTNLQYLSIGN 160 (227)
T ss_dssp CCSCC--GGGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCGG--GGG---------CTTCCEEECCS
T ss_pred ccccc--cccccccccccccccccccccc--chhccccchhhhhchhhhhchhhh--hcc---------ccccccccccc
Confidence 88743 3477889999999999887643 346677889999998888764322 222 37889999999
Q ss_pred CcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEecc
Q 048796 168 NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSY 237 (555)
Q Consensus 168 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~ 237 (555)
|.+++. ..+.++++|+.|+|++|++++ ++ .++++++|++|+|++|+|++..|-.-.++|+.|++++
T Consensus 161 n~~~~~--~~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~i~~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 161 AQVSDL--TPLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTN 226 (227)
T ss_dssp SCCCCC--GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEEE
T ss_pred cccccc--hhhcccccceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCCCCcccccCCCCCEEEeeC
Confidence 998754 347889999999999999985 33 4788899999999999998654322227899999874
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.76 E-value=6.2e-18 Score=158.19 Aligned_cols=187 Identities=18% Similarity=0.235 Sum_probs=154.2
Q ss_pred CCCCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 6 NSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
.+.+|+.|++.+|+|+..-+ +.+++|++|+|++|+|++..+ +..+++|+.|++++|.++. ++ .+..+++|+.+++
T Consensus 39 ~l~~L~~L~l~~~~i~~l~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~-i~-~l~~l~~L~~l~l 114 (227)
T d1h6ua2 39 DLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDL 114 (227)
T ss_dssp HHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEEC
T ss_pred HcCCcCEEECCCCCCCcchhHhcCCCCcEeecCCceeecccc--ccccccccccccccccccc-cc-ccccccccccccc
Confidence 46789999999999985421 468899999999999987654 6777899999999999983 33 5789999999999
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~ 164 (555)
++|...+.. .+...+.+..++++++.+... ..+..+++|+.|++++|.+....+ + ..+++|+.|+
T Consensus 115 ~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~~~--l---------~~l~~L~~L~ 179 (227)
T d1h6ua2 115 TSTQITDVT--PLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDLTP--L---------ANLSKLTTLK 179 (227)
T ss_dssp TTSCCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCCGG--G---------TTCTTCCEEE
T ss_pred ccccccccc--hhccccchhhhhchhhhhchh--hhhccccccccccccccccccchh--h---------cccccceecc
Confidence 999887543 367788999999999998743 347788999999999998874322 3 3449999999
Q ss_pred ccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCC
Q 048796 165 LSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSG 215 (555)
Q Consensus 165 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 215 (555)
|++|++++. ..+..+++|++|+|++|+|++. + .+.++++|+.|++++
T Consensus 180 Ls~n~l~~l--~~l~~l~~L~~L~Ls~N~lt~i-~-~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 180 ADDNKISDI--SPLASLPNLIEVHLKNNQISDV-S-PLANTSNLFIVTLTN 226 (227)
T ss_dssp CCSSCCCCC--GGGGGCTTCCEEECTTSCCCBC-G-GGTTCTTCCEEEEEE
T ss_pred cCCCccCCC--hhhcCCCCCCEEECcCCcCCCC-c-ccccCCCCCEEEeeC
Confidence 999999964 3488999999999999999964 3 488999999999874
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=1.1e-17 Score=158.14 Aligned_cols=215 Identities=15% Similarity=0.090 Sum_probs=163.5
Q ss_pred CCEEECCCCcCCCCCCCCC-CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCC-CccccCCCCccEEEeeC-
Q 048796 10 LSVLNLSSNSLSGTLPTSL-KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSL-PNLTSQFDRLSTFNIRN- 86 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~- 86 (555)
.+.++.++++++ .+|+.+ +++++|+|++|+|+.+....|..+++|++|+|++|.+...+ +..|.+++.+++|.+..
T Consensus 10 ~~~i~c~~~~l~-~iP~~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~ 88 (242)
T d1xwdc1 10 NRVFLCQESKVT-EIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 88 (242)
T ss_dssp SSEEEEESCSCS-SCCSCSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECC
T ss_pred CCEEEEeCCCCC-CcCCCCCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccc
Confidence 478999999998 666655 58999999999999888888999999999999999987644 45788999999998875
Q ss_pred CcCCCCCchhccCCCCccEEEcCCCcCCCCCch-hhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEc
Q 048796 87 NSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPD-NFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDL 165 (555)
Q Consensus 87 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~L 165 (555)
|++....+..|..+++|++|++++|++....+. .+..+..+..+...++.+....+..+..+. ..++.|++
T Consensus 89 n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~--------~~l~~L~l 160 (242)
T d1xwdc1 89 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS--------FESVILWL 160 (242)
T ss_dssp TTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSB--------SSCEEEEC
T ss_pred ccccccccccccccccccccccchhhhccccccccccccccccccccccccccccccccccccc--------ccceeeec
Confidence 678877888899999999999999999743322 233455566666677777755555554431 46788999
Q ss_pred cCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEE
Q 048796 166 SGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFN 234 (555)
Q Consensus 166 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ 234 (555)
++|.++...+..|.....++.+++.+|.|+...+..|.++++|++|+|++|+|+. +|.....++..|.
T Consensus 161 ~~n~l~~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~-l~~~~~~~l~~L~ 228 (242)
T d1xwdc1 161 NKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHS-LPSYGLENLKKLR 228 (242)
T ss_dssp CSSCCCEECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCC-CCSSSCTTCCEEE
T ss_pred ccccccccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCc-cCHHHHcCCcccc
Confidence 9999997666555544334455678889986666678999999999999999994 4443334555553
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.76 E-value=1.2e-18 Score=161.17 Aligned_cols=179 Identities=22% Similarity=0.306 Sum_probs=96.0
Q ss_pred EECCCCcCCCCCCC-CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCC
Q 048796 13 LNLSSNSLSGTLPT-SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTG 91 (555)
Q Consensus 13 L~Ls~N~l~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 91 (555)
.++..+.+++.++. .+.+|++|++++|.++.... +..+++|++|+|++|.|++. + .++.+++|++|++++|+|++
T Consensus 29 ~~l~~~~~~~~~~~~~L~~L~~L~l~~~~i~~l~~--l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~~ 104 (210)
T d1h6ta2 29 DNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVKD 104 (210)
T ss_dssp HHTTCSCTTSEECHHHHHTCCEEECTTSCCCCCTT--GGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC
T ss_pred HHhCcCccCCccCHHHhcCccEEECcCCCCCCchh--HhhCCCCCEEeCCCccccCc-c-ccccCccccccccccccccc
Confidence 34555555544432 35566666666666654431 34455666666666666532 2 24556666666666666653
Q ss_pred CCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCC
Q 048796 92 TLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT 171 (555)
Q Consensus 92 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~ 171 (555)
++ .+..+++|+.|++++|.+.. + ..+..+++|+.+++++|.+++.. .+.. +++|+.+++++|.++
T Consensus 105 -l~-~l~~l~~L~~L~l~~~~~~~-~-~~l~~l~~l~~l~~~~n~l~~~~--~~~~---------l~~L~~l~l~~n~l~ 169 (210)
T d1h6ta2 105 -LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDIT--VLSR---------LTKLDTLSLEDNQIS 169 (210)
T ss_dssp -GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCCG--GGGG---------CTTCSEEECCSSCCC
T ss_pred -cc-cccccccccccccccccccc-c-ccccccccccccccccccccccc--cccc---------ccccccccccccccc
Confidence 22 35556666666666666542 2 24555666666666666554321 1112 255566666666665
Q ss_pred CcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCC
Q 048796 172 GVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLS 214 (555)
Q Consensus 172 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 214 (555)
+.. .+.++++|+.|+|++|+|+. ++ .+.++++|++|+|+
T Consensus 170 ~i~--~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 170 DIV--PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELF 208 (210)
T ss_dssp CCG--GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEE
T ss_pred ccc--cccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEcc
Confidence 431 25555666666666666553 33 35555566665554
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.75 E-value=1.9e-18 Score=157.28 Aligned_cols=141 Identities=22% Similarity=0.245 Sum_probs=77.0
Q ss_pred CccEEEcCCCcCCCCC-chhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccC
Q 048796 102 RLVTLDVSSNQLKGPI-PDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN 180 (555)
Q Consensus 102 ~L~~L~L~~N~l~~~~-~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~ 180 (555)
++++|+|++|+|++.+ +..|..+++|+.|+|++|.+....+..+..+ ++|++|+|++|+|+.+.+..|.+
T Consensus 30 ~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~---------~~L~~L~Ls~N~l~~l~~~~F~~ 100 (192)
T d1w8aa_ 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGA---------SHIQELQLGENKIKEISNKMFLG 100 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTC---------TTCCEEECCSCCCCEECSSSSTT
T ss_pred CCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccc---------cccceeeeccccccccCHHHHhC
Confidence 3444444444443322 2333444455555555555544444444333 55555555555555555566666
Q ss_pred ccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEeccCCCCCCcCccccCC
Q 048796 181 MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSYNDLSGPIPENLRNF 251 (555)
Q Consensus 181 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~N~l~~~~p~~l~~~ 251 (555)
+++|+.|+|++|+|++..+..|..+++|++|+|++|.+.......+. ..++.+.+..|.+.|..|..+++.
T Consensus 101 l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~~~~~l~~~~l~~~~~~c~~p~~l~~~ 172 (192)
T d1w8aa_ 101 LHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRDV 172 (192)
T ss_dssp CTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSSTTTTTS
T ss_pred CCcccccccCCccccccCHHHhcCCcccccccccccccccccchHHHhhhhhhhcccCCCeEeCCChhhcCC
Confidence 66666666666666666666666666777777777766644333222 334455556666666666555443
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.75 E-value=3.6e-18 Score=156.43 Aligned_cols=179 Identities=25% Similarity=0.317 Sum_probs=102.9
Q ss_pred CCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCc
Q 048796 10 LSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS 88 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 88 (555)
+..+.++.+++++.+. ..+.++++|++++|.|+.+. .+..+++|++|+|++|.+++..+ +.++++|++|++++|.
T Consensus 20 ~i~~~l~~~~~~~~~~~~~l~~l~~L~l~~~~i~~l~--~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~ 95 (199)
T d2omxa2 20 KMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSID--GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQ 95 (199)
T ss_dssp HHHHHTTCSSTTSEECHHHHTTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred HHHHHhCCCCCCCccCHHHhcCCCEEECCCCCCCCcc--ccccCCCcCcCccccccccCccc--ccCCcccccccccccc
Confidence 3344566666665433 23566777777777766432 23445667777777777664322 6666777777777776
Q ss_pred CCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCC
Q 048796 89 VTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGN 168 (555)
Q Consensus 89 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N 168 (555)
+... + .+..+++|+.|++++|.+... ..+..+++|+.|++++|.+... + .+. .+++|+.|++.+|
T Consensus 96 ~~~~-~-~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~l~---------~~~~L~~L~l~~n 160 (199)
T d2omxa2 96 IADI-T-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDI-S-ALS---------GLTSLQQLNFSSN 160 (199)
T ss_dssp CCCC-G-GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCCC-G-GGT---------TCTTCSEEECCSS
T ss_pred cccc-c-ccccccccccccccccccccc--cccchhhhhHHhhhhhhhhccc-c-ccc---------ccccccccccccc
Confidence 6533 2 256666677777766666532 2355666666666666665421 1 122 2256666666666
Q ss_pred cCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEE
Q 048796 169 ALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYL 211 (555)
Q Consensus 169 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 211 (555)
.+++. ..+.++++|+.|++++|+|++ ++ .++.+++|+.|
T Consensus 161 ~l~~l--~~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~L 199 (199)
T d2omxa2 161 QVTDL--KPLANLTTLERLDISSNKVSD-IS-VLAKLTNLESL 199 (199)
T ss_dssp CCCCC--GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred cccCC--ccccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCcC
Confidence 66643 235566666666666666653 22 35556666554
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.75 E-value=3.2e-18 Score=155.81 Aligned_cols=128 Identities=22% Similarity=0.300 Sum_probs=79.1
Q ss_pred CCEEECCCCcCCCCCCCCC-CCCCEEEcCCCcCCC-CCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 10 LSVLNLSSNSLSGTLPTSL-KSCVILDLSRNMISG-DISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~~~l-~~L~~L~L~~N~l~~-~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
.+++++++++|+ .+|..+ .++++|+|++|+|+. .....|..+++|+.|+|++|.+....+..|..+++|++|+|++|
T Consensus 10 ~~~v~Cs~~~L~-~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N 88 (192)
T d1w8aa_ 10 GTTVDCTGRGLK-EIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CCEEEEeCCCcC-ccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence 456777777776 455444 356666666666654 33455566666666666666666666666666666666666666
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCccc
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
+|+...+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|.+.
T Consensus 89 ~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred cccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccc
Confidence 666555556666666666666666666555555555555555555555554
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.71 E-value=6.1e-17 Score=149.35 Aligned_cols=165 Identities=19% Similarity=0.252 Sum_probs=137.8
Q ss_pred CCCCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 6 NSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
.+.+|+.|++++|.++...+ +.+++|++|+|++|+|+++.+ +..+++|+.|++++|+|++ ++ .+..+++|+.|++
T Consensus 44 ~L~~L~~L~l~~~~i~~l~~l~~l~~L~~L~L~~n~i~~l~~--~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l 119 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (210)
T ss_dssp HHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred HhcCccEEECcCCCCCCchhHhhCCCCCEEeCCCccccCccc--cccCccccccccccccccc-cc-ccccccccccccc
Confidence 45689999999999986433 568999999999999997653 4677899999999999984 44 5889999999999
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~ 164 (555)
++|.+... ..+..+++|+.+++++|.++. +..+..+++|+.+++++|++++..+ +.. +++|+.|+
T Consensus 120 ~~~~~~~~--~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i~~--l~~---------l~~L~~L~ 184 (210)
T d1h6ta2 120 EHNGISDI--NGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDIVP--LAG---------LTKLQNLY 184 (210)
T ss_dssp TTSCCCCC--GGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCCGG--GTT---------CTTCCEEE
T ss_pred cccccccc--ccccccccccccccccccccc--ccccccccccccccccccccccccc--ccC---------CCCCCEEE
Confidence 99998743 358889999999999999974 3457789999999999999985322 333 49999999
Q ss_pred ccCCcCCCcCCccccCccccceeeccc
Q 048796 165 LSGNALTGVLPSDIGNMGRLRLLNLAN 191 (555)
Q Consensus 165 Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 191 (555)
|++|.|++. + .|.++++|+.|+|++
T Consensus 185 Ls~N~i~~l-~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 185 LSKNHISDL-R-ALAGLKNLDVLELFS 209 (210)
T ss_dssp CCSSCCCBC-G-GGTTCTTCSEEEEEE
T ss_pred CCCCCCCCC-h-hhcCCCCCCEEEccC
Confidence 999999864 4 689999999999975
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.71 E-value=9.1e-16 Score=152.42 Aligned_cols=121 Identities=26% Similarity=0.255 Sum_probs=83.8
Q ss_pred CCCCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 8 TTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
.+|++|||++|+|+ .+|+.+++|++|+|++|+|+.++ .. ..+|+.|++++|.++ .++.. .+.|++|++++|
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~~~~L~~L~Ls~N~l~~lp-~~---~~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~~n 108 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPELPPHLESLVASCNSLTELP-EL---PQSLKSLLVDNNNLK-ALSDL---PPLLEYLGVSNN 108 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSCCTTCSEEECCSSCCSSCC-CC---CTTCCEEECCSSCCS-CCCSC---CTTCCEEECCSS
T ss_pred cCCCEEEeCCCCCC-CCCCCCCCCCEEECCCCCCcccc-cc---hhhhhhhhhhhcccc-hhhhh---cccccccccccc
Confidence 46888999999987 57778888999999999888554 22 346888888888887 33322 135888888888
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCC------------------chhhhCCCCCCeEEccCCcccc
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPI------------------PDNFFSSMALTNLNLSGNGFSG 139 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~------------------~~~~~~~~~L~~L~Ls~N~l~~ 139 (555)
.+.. +|. +..+++|+.|++++|.+.... ...+..+..++.|.+.+|.+..
T Consensus 109 ~l~~-lp~-~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~ 176 (353)
T d1jl5a_ 109 QLEK-LPE-LQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKK 176 (353)
T ss_dssp CCSS-CCC-CTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS
T ss_pred cccc-ccc-hhhhccceeeccccccccccccccccccchhhccccccccccccccccceecccccccccc
Confidence 8874 443 567788888888887765221 1123345566777777776653
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.70 E-value=2.2e-16 Score=144.34 Aligned_cols=161 Identities=19% Similarity=0.273 Sum_probs=133.3
Q ss_pred CCCCCCEEECCCCcCCCCC-CCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 6 NSTTLSVLNLSSNSLSGTL-PTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++.+|++|++++|+++... -+.+++|++|+|++|+|++..+ +..+++|+.|++++|.+.. ++ .+.+++.|+.|++
T Consensus 38 ~l~~l~~L~l~~~~i~~l~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~l 113 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLTL 113 (199)
T ss_dssp HHTTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEEC
T ss_pred HhcCCCEEECCCCCCCCccccccCCCcCcCccccccccCccc--ccCCccccccccccccccc-cc-ccccccccccccc
Confidence 4678999999999998532 1468899999999999997654 6778899999999999874 33 4889999999999
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~ 164 (555)
++|.+... ..+..+++|+.|++++|++. .+ ..+..+++|+.|++.+|.+++..+ + .++++|++|+
T Consensus 114 ~~~~~~~~--~~~~~l~~L~~L~l~~n~l~-~~-~~l~~~~~L~~L~l~~n~l~~l~~--l---------~~l~~L~~L~ 178 (199)
T d2omxa2 114 FNNQITDI--DPLKNLTNLNRLELSSNTIS-DI-SALSGLTSLQQLNFSSNQVTDLKP--L---------ANLTTLERLD 178 (199)
T ss_dssp CSSCCCCC--GGGTTCTTCSEEECCSSCCC-CC-GGGTTCTTCSEEECCSSCCCCCGG--G---------TTCTTCCEEE
T ss_pred cccccccc--cccchhhhhHHhhhhhhhhc-cc-ccccccccccccccccccccCCcc--c---------cCCCCCCEEE
Confidence 99998754 34788999999999999997 34 368899999999999999985321 3 3449999999
Q ss_pred ccCCcCCCcCCccccCcccccee
Q 048796 165 LSGNALTGVLPSDIGNMGRLRLL 187 (555)
Q Consensus 165 Ls~N~l~~~~p~~~~~l~~L~~L 187 (555)
+++|++++. +.++.+++|+.|
T Consensus 179 ls~N~i~~i--~~l~~L~~L~~L 199 (199)
T d2omxa2 179 ISSNKVSDI--SVLAKLTNLESL 199 (199)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEE
T ss_pred CCCCCCCCC--ccccCCCCCCcC
Confidence 999999864 357888888875
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=2.6e-16 Score=148.34 Aligned_cols=210 Identities=16% Similarity=0.117 Sum_probs=161.5
Q ss_pred CEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCC-chhccCCCCccEEEcC-
Q 048796 32 VILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTL-PSLLEISPRLVTLDVS- 109 (555)
Q Consensus 32 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~l~~l~~L~~L~L~- 109 (555)
+.++.++++++.++..++ .++++|+|++|.|+...+..|.++++|++|+|++|.+...+ +..|..++++++|++.
T Consensus 11 ~~i~c~~~~l~~iP~~l~---~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCSSCCSCSC---SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCCCcCCCCC---CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 578899999997766554 47999999999999666678999999999999999987644 4578899999999985
Q ss_pred CCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCcc-ccceee
Q 048796 110 SNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMG-RLRLLN 188 (555)
Q Consensus 110 ~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~ 188 (555)
.|++....+..|..+++|+.|++++|.+....+... +..+..+..+...++.+....+..|.+++ .++.|+
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~--------~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~ 159 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHK--------IHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILW 159 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTT--------TCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEE
T ss_pred cccccccccccccccccccccccchhhhcccccccc--------cccccccccccccccccccccccccccccccceeee
Confidence 467876777888999999999999999874433221 12236677778888888877777777765 789999
Q ss_pred cccccccCCCchhccCCCCCC-EEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccCCCC
Q 048796 189 LANNHLSGKMPSELSKLGALE-YLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNFPK 253 (555)
Q Consensus 189 L~~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~~~ 253 (555)
+++|+++...+..+. .+++. .+++++|+++...+..+. ++|+.|++++|+|+...+..+.+++.
T Consensus 160 l~~n~l~~i~~~~~~-~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~ 226 (242)
T d1xwdc1 160 LNKNGIQEIHNCAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKK 226 (242)
T ss_dssp CCSSCCCEECTTTTT-TCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCE
T ss_pred ccccccccccccccc-chhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcc
Confidence 999999965555544 45554 446788999955444455 89999999999998544444555443
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.66 E-value=5.6e-15 Score=146.60 Aligned_cols=225 Identities=27% Similarity=0.292 Sum_probs=157.1
Q ss_pred CCCCCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeC
Q 048796 7 STTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRN 86 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 86 (555)
.++|++|+|++|+|+ .+|+.+.+|+.|++++|.++.+. . ..+.|++|+|++|.+. .+|. ++.+++|++|++++
T Consensus 57 ~~~L~~L~Ls~N~l~-~lp~~~~~L~~L~l~~n~l~~l~-~---lp~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L~l~~ 129 (353)
T d1jl5a_ 57 PPHLESLVASCNSLT-ELPELPQSLKSLLVDNNNLKALS-D---LPPLLEYLGVSNNQLE-KLPE-LQNSSFLKIIDVDN 129 (353)
T ss_dssp CTTCSEEECCSSCCS-SCCCCCTTCCEEECCSSCCSCCC-S---CCTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCS
T ss_pred CCCCCEEECCCCCCc-ccccchhhhhhhhhhhcccchhh-h---hccccccccccccccc-cccc-hhhhccceeecccc
Confidence 368999999999999 77888999999999999998653 2 2346999999999998 5554 57899999999999
Q ss_pred CcCCCCCc------------------hhccCCCCccEEEcCCCcCCCCC------------------chhhhCCCCCCeE
Q 048796 87 NSVTGTLP------------------SLLEISPRLVTLDVSSNQLKGPI------------------PDNFFSSMALTNL 130 (555)
Q Consensus 87 N~l~~~~~------------------~~l~~l~~L~~L~L~~N~l~~~~------------------~~~~~~~~~L~~L 130 (555)
|.+..... ..+..++.++.|+++.|.+.... ...+..++.|+.+
T Consensus 130 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~L~~l 209 (353)
T d1jl5a_ 130 NSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTI 209 (353)
T ss_dssp SCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEE
T ss_pred ccccccccccccccchhhccccccccccccccccceeccccccccccccccccccccccccccccccccccccccccccc
Confidence 98763321 23456678889999888765311 1124456789999
Q ss_pred EccCCcccccCCcCcccccccc--------ccCCCCCcCEEEccCCcCCCc----------------CCccccCccccce
Q 048796 131 NLSGNGFSGAIPLRSSHASELL--------VLPSYPPMESLDLSGNALTGV----------------LPSDIGNMGRLRL 186 (555)
Q Consensus 131 ~Ls~N~l~~~~p~~~~~~~~l~--------~l~~~~~L~~L~Ls~N~l~~~----------------~p~~~~~l~~L~~ 186 (555)
++++|.... .+.....+.... .......+..+++..+.+.+. ++.....+++|++
T Consensus 210 ~l~~n~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~L~~ 288 (353)
T d1jl5a_ 210 YADNNLLKT-LPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEE 288 (353)
T ss_dssp ECCSSCCSS-CCSCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCE
T ss_pred ccccccccc-cccccccccccccccccccccccccccccccccccccccccccccchhcccccccCccccccccCCCCCE
Confidence 999987763 333222211110 001123444555544443321 1111233578999
Q ss_pred eecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCCCcCc
Q 048796 187 LNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPE 246 (555)
Q Consensus 187 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~~~p~ 246 (555)
|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|.. ..+|+.|++++|+++ .+|.
T Consensus 289 L~Ls~N~l~-~lp~---~~~~L~~L~L~~N~L~-~l~~~-~~~L~~L~L~~N~L~-~lp~ 341 (353)
T d1jl5a_ 289 LNVSNNKLI-ELPA---LPPRLERLIASFNHLA-EVPEL-PQNLKQLHVEYNPLR-EFPD 341 (353)
T ss_dssp EECCSSCCS-CCCC---CCTTCCEEECCSSCCS-CCCCC-CTTCCEEECCSSCCS-SCCC
T ss_pred EECCCCccC-cccc---ccCCCCEEECCCCcCC-ccccc-cCCCCEEECcCCcCC-CCCc
Confidence 999999998 4664 4688999999999999 55643 358999999999998 4554
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=1.2e-15 Score=147.46 Aligned_cols=208 Identities=20% Similarity=0.217 Sum_probs=108.6
Q ss_pred CCCEEEcCCCcCCCCC-cccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC-cCCCC-CchhccCCCCccEE
Q 048796 30 SCVILDLSRNMISGDI-SDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN-SVTGT-LPSLLEISPRLVTL 106 (555)
Q Consensus 30 ~L~~L~L~~N~l~~~~-~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~l~~l~~L~~L 106 (555)
+|++|||++|.++... ...+..+++|++|+|++|.+++..+..++.+++|++|+|++| .++.. +...+..+++|++|
T Consensus 47 ~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L 126 (284)
T d2astb2 47 RVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDEL 126 (284)
T ss_dssp CCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEE
T ss_pred CCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcccc
Confidence 5666666666665332 344555566666666666666555555666666666666664 34421 11223455666666
Q ss_pred EcCCCc-CCCC-CchhhhC-CCCCCeEEccCCc--ccccCCcCccccccccccCCCCCcCEEEccCC-cCCCcCCccccC
Q 048796 107 DVSSNQ-LKGP-IPDNFFS-SMALTNLNLSGNG--FSGAIPLRSSHASELLVLPSYPPMESLDLSGN-ALTGVLPSDIGN 180 (555)
Q Consensus 107 ~L~~N~-l~~~-~~~~~~~-~~~L~~L~Ls~N~--l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N-~l~~~~p~~~~~ 180 (555)
+++++. ++.. +...+.. .+.|+.|+++++. ++...-.. ....+++|++|+|++| .+++.....+..
T Consensus 127 ~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~--------l~~~~~~L~~L~L~~~~~itd~~~~~l~~ 198 (284)
T d2astb2 127 NLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLST--------LVRRCPNLVHLDLSDSVMLKNDCFQEFFQ 198 (284)
T ss_dssp ECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHH--------HHHHCTTCSEEECTTCTTCCGGGGGGGGG
T ss_pred ccccccccccccchhhhcccccccchhhhcccccccccccccc--------cccccccccccccccccCCCchhhhhhcc
Confidence 666642 3211 1112222 3466666666542 22110000 0112366677777664 355555556666
Q ss_pred ccccceeecccc-cccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCCCcCc
Q 048796 181 MGRLRLLNLANN-HLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPE 246 (555)
Q Consensus 181 l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~~~p~ 246 (555)
+++|++|+|++| .+++.....++.+++|+.|+++++ ++...-..+...+..|++..++++...++
T Consensus 199 ~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~-~~d~~l~~l~~~lp~L~i~~~~ls~~~~~ 264 (284)
T d2astb2 199 LNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHLQINCSHFTTIARP 264 (284)
T ss_dssp CTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTSEESCCCSCCTTCS
T ss_pred cCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC-CCHHHHHHHHHhCccccccCccCCCCCCC
Confidence 667777777763 455554555666677777777665 33222222223444455566666554433
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.55 E-value=7.9e-16 Score=153.08 Aligned_cols=233 Identities=21% Similarity=0.183 Sum_probs=161.1
Q ss_pred CCCCCCEEECCCCcCCCC-------CCCCCCCCCEEEcCCCcCCCCC----------cccccCCCCccEEEccCCcCCCC
Q 048796 6 NSTTLSVLNLSSNSLSGT-------LPTSLKSCVILDLSRNMISGDI----------SDMQNWEANLEILDLSSNKLSGS 68 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~-------~~~~l~~L~~L~L~~N~l~~~~----------~~~~~~~~~L~~L~Ls~N~l~~~ 68 (555)
+.++|+.|+|++|.|... .....++|+.|+++++.+.... ...+...++|+.|+|++|.+...
T Consensus 29 ~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~ 108 (344)
T d2ca6a1 29 EDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPT 108 (344)
T ss_dssp HCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTT
T ss_pred hCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccccccc
Confidence 467899999999988632 2245678999999988664322 12234567899999999998754
Q ss_pred ----CCccccCCCCccEEEeeCCcCCCCCch-------------hccCCCCccEEEcCCCcCCCC----CchhhhCCCCC
Q 048796 69 ----LPNLTSQFDRLSTFNIRNNSVTGTLPS-------------LLEISPRLVTLDVSSNQLKGP----IPDNFFSSMAL 127 (555)
Q Consensus 69 ----~~~~~~~l~~L~~L~L~~N~l~~~~~~-------------~l~~l~~L~~L~L~~N~l~~~----~~~~~~~~~~L 127 (555)
+...+...++|++|++++|.+...... .....+.|+.|++++|+++.. +...+.....|
T Consensus 109 ~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L 188 (344)
T d2ca6a1 109 AQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL 188 (344)
T ss_dssp THHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTC
T ss_pred cccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhh
Confidence 333445678999999999987532111 123567899999999988632 23345667899
Q ss_pred CeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCc----CCccccCccccceeecccccccCCCchhc-
Q 048796 128 TNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGV----LPSDIGNMGRLRLLNLANNHLSGKMPSEL- 202 (555)
Q Consensus 128 ~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~- 202 (555)
+.|+|++|.+.......+ + ...+..+++|+.|+|++|.++.. +...+..+++|++|+|++|.|++.....+
T Consensus 189 ~~L~L~~n~i~~~g~~~~--l--~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~ 264 (344)
T d2ca6a1 189 HTVKMVQNGIRPEGIEHL--L--LEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV 264 (344)
T ss_dssp CEEECCSSCCCHHHHHHH--H--HTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHH
T ss_pred cccccccccccccccccc--h--hhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHH
Confidence 999999998864210000 0 01123348899999999998743 33456788999999999999985433333
Q ss_pred ---cC--CCCCCEEeCCCCcCCCCCC----hhhh---cCCCEEEeccCCCCC
Q 048796 203 ---SK--LGALEYLDLSGNQFKGEIP----DKLS---LKLNEFNVSYNDLSG 242 (555)
Q Consensus 203 ---~~--l~~L~~L~Ls~N~l~~~~p----~~~~---~~L~~L~ls~N~l~~ 242 (555)
.. .+.|+.||+++|.|+.... ..+. +.|+.|++++|.+..
T Consensus 265 ~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 265 DAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp HHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 22 3679999999999874322 2221 579999999999964
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=5.6e-15 Score=140.28 Aligned_cols=82 Identities=20% Similarity=0.319 Sum_probs=74.2
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|++++++.||||.++.... ..++|.+|+.++++++|||||+++|+|.+++. .++||||+++|+
T Consensus 9 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~--~~iv~Ey~~~g~ 85 (258)
T d1k2pa_ 9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP--IFIITEYMANGC 85 (258)
T ss_dssp CCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSS--EEEEEECCTTEE
T ss_pred eEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCc--eEEEEEccCCCc
Confidence 789999999999999998888999999976443 46789999999999999999999999988777 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 86 l~~~~ 90 (258)
T d1k2pa_ 86 LLNYL 90 (258)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 98774
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=3.7e-15 Score=142.20 Aligned_cols=82 Identities=17% Similarity=0.281 Sum_probs=74.1
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|++.++..||||+++... ...++|.+|+.++++++|||||+++|+|...+. .++|||||++|+
T Consensus 10 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~--~~lv~E~~~~g~ 86 (263)
T d1sm2a_ 10 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGC 86 (263)
T ss_dssp EEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CEEEEECCTTCB
T ss_pred EEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCc--eEEEEEecCCCc
Confidence 67899999999999999888899999997543 346789999999999999999999999988777 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 87 L~~~l 91 (263)
T d1sm2a_ 87 LSDYL 91 (263)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99876
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=1e-14 Score=139.74 Aligned_cols=82 Identities=22% Similarity=0.329 Sum_probs=71.9
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|++.+++.||||+++... ...++|.+|+.++++++|||||+++|+|.+ +. .++|||||++|+
T Consensus 18 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~--~~iv~Ey~~~g~ 93 (272)
T d1qpca_ 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP--IYIITEYMENGS 93 (272)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS--CEEEEECCTTCB
T ss_pred eEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CC--eEEEEEeCCCCc
Confidence 67899999999999999888899999997543 346789999999999999999999998864 44 799999999999
Q ss_pred hhhhhC
Q 048796 550 LALHLY 555 (555)
Q Consensus 550 L~~~l~ 555 (555)
|.++++
T Consensus 94 L~~~~~ 99 (272)
T d1qpca_ 94 LVDFLK 99 (272)
T ss_dssp HHHHTT
T ss_pred HHHHHh
Confidence 988763
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=1.6e-14 Score=139.62 Aligned_cols=83 Identities=23% Similarity=0.370 Sum_probs=74.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||+||+|+. .+|+.||||.++.......+.+.+|+.++++++|||||++++++.+.+. .|+|||||++|
T Consensus 25 ~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~--~~ivmEy~~gg 102 (293)
T d1yhwa1 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE--LWVVMEYLAGG 102 (293)
T ss_dssp CEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECCTTC
T ss_pred EEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCE--EEEEEEecCCC
Confidence 67899999999999997 6799999999976554556789999999999999999999999998777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 103 ~L~~~~ 108 (293)
T d1yhwa1 103 SLTDVV 108 (293)
T ss_dssp BHHHHH
T ss_pred cHHHHh
Confidence 998764
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=1.4e-14 Score=127.07 Aligned_cols=82 Identities=23% Similarity=0.237 Sum_probs=43.7
Q ss_pred CccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEcc
Q 048796 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLS 133 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls 133 (555)
+|++|+|++|.|+ .++..+..+++|+.|+|++|.|+.. +.+..+++|++|++++|+++...+..+..+++|+.|+++
T Consensus 19 ~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~ 95 (162)
T d1a9na_ 19 RDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILT 95 (162)
T ss_dssp SCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECC
T ss_pred cCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCccccccccccccceec
Confidence 4556666666665 3344445555666666666665532 235555566666666666553333333445555555555
Q ss_pred CCccc
Q 048796 134 GNGFS 138 (555)
Q Consensus 134 ~N~l~ 138 (555)
+|.+.
T Consensus 96 ~N~i~ 100 (162)
T d1a9na_ 96 NNSLV 100 (162)
T ss_dssp SCCCC
T ss_pred ccccc
Confidence 55554
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.50 E-value=6.5e-15 Score=142.19 Aligned_cols=82 Identities=22% Similarity=0.314 Sum_probs=73.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|++ .+|+.||||+++... ...++|.+|+.+|++++|||||+++|+|.+.+. .++|||||++|
T Consensus 22 ~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~--~~iv~E~~~~g 98 (287)
T d1opja_ 22 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYG 98 (287)
T ss_dssp EEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CEEEEECCTTC
T ss_pred eeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCe--eEEEeecccCc
Confidence 67899999999999998 568899999997543 346789999999999999999999999988777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.++|
T Consensus 99 ~l~~~l 104 (287)
T d1opja_ 99 NLLDYL 104 (287)
T ss_dssp BHHHHH
T ss_pred chHHHh
Confidence 998876
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=1.6e-14 Score=126.80 Aligned_cols=128 Identities=18% Similarity=0.210 Sum_probs=74.9
Q ss_pred ccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcccccccc
Q 048796 73 TSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELL 152 (555)
Q Consensus 73 ~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~ 152 (555)
+.++..|++|+|++|+|+. ++..+..+++|+.|+|++|+|+ .+ +.+..+++|+.|++++|.++...+..+..+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~-~l-~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l---- 86 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIR-KL-DGFPLLRRLKTLLVNNNRICRIGEGLDQAL---- 86 (162)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCC-EE-CCCCCCSSCCEEECCSSCCCEECSCHHHHC----
T ss_pred ccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCC-cc-CCcccCcchhhhhcccccccCCCccccccc----
Confidence 4456667777777777773 3555566677777777777776 33 235666667777777776664433323333
Q ss_pred ccCCCCCcCEEEccCCcCCCcCC-ccccCccccceeecccccccCCC---chhccCCCCCCEEe
Q 048796 153 VLPSYPPMESLDLSGNALTGVLP-SDIGNMGRLRLLNLANNHLSGKM---PSELSKLGALEYLD 212 (555)
Q Consensus 153 ~l~~~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~l~~L~~L~ 212 (555)
++|+.|+|++|.|+.... ..+..+++|+.|++++|.++... +..+..+++|++||
T Consensus 87 -----~~L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 87 -----PDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp -----TTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred -----cccccceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 666666666666654321 34555666666666666665321 12345556666655
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=2e-14 Score=136.73 Aligned_cols=83 Identities=25% Similarity=0.413 Sum_probs=73.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||+||+|+. .+|+.||||.+.... ....+.+.+|+.++++++|||||++++++.+.+. .|+|||||
T Consensus 11 ~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~--~~ivmEy~ 88 (263)
T d2j4za1 11 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYA 88 (263)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred EEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCE--EEEEEeec
Confidence 67899999999999998 579999999986432 2336779999999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 89 ~~g~L~~~l 97 (263)
T d2j4za1 89 PLGTVYREL 97 (263)
T ss_dssp TTCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999998876
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=1.1e-14 Score=140.64 Aligned_cols=83 Identities=20% Similarity=0.373 Sum_probs=74.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|+.||||.++.......+.|.+|+.+|++++|||||++++++.+.+. .++|||||++|
T Consensus 17 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~--~~lvmEy~~~g 94 (288)
T d2jfla1 17 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENN--LWILIEFCAGG 94 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECCTTE
T ss_pred eEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCe--EEEEEecCCCC
Confidence 56899999999999997 6799999999976655566789999999999999999999999998777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 95 ~L~~~~ 100 (288)
T d2jfla1 95 AVDAVM 100 (288)
T ss_dssp EHHHHH
T ss_pred cHHHHH
Confidence 998875
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.48 E-value=1.4e-13 Score=114.88 Aligned_cols=102 Identities=25% Similarity=0.288 Sum_probs=62.6
Q ss_pred CEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCC
Q 048796 32 VILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSN 111 (555)
Q Consensus 32 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 111 (555)
|+|+|++|+|+... . +..+.+|++|++++|.|+ .+|..+..+++|++|++++|.|+.. + .+..+++|++|++++|
T Consensus 1 R~L~Ls~n~l~~l~-~-l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l-~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLTVLC-H-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-D-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCSSCC-C-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCCCCc-c-cccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccccc-C-ccccccccCeEECCCC
Confidence 35666666665442 2 344556777777777776 4555666677777777777776643 2 3666667777777777
Q ss_pred cCCCCC-chhhhCCCCCCeEEccCCccc
Q 048796 112 QLKGPI-PDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 112 ~l~~~~-~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
+|+... ...+..+++|+.|++++|.+.
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 765322 234566666666666666665
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=1.2e-14 Score=138.93 Aligned_cols=83 Identities=18% Similarity=0.216 Sum_probs=71.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||+||+|+. .+|+.||||+++.... ...+.|.+|+.++++++|||||++++++.+.+. .|+|||||++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~--~~ivmEy~~g 87 (271)
T d1nvra_ 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI--QYLFLEYCSG 87 (271)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTE--EEEEEECCTT
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCce--eEEEEeccCC
Confidence 67899999999999997 5799999999965433 235679999999999999999999999998777 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.++|
T Consensus 88 g~L~~~l 94 (271)
T d1nvra_ 88 GELFDRI 94 (271)
T ss_dssp EEGGGGS
T ss_pred CcHHHHH
Confidence 9999886
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=2.8e-14 Score=138.26 Aligned_cols=83 Identities=20% Similarity=0.404 Sum_probs=73.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||+||+|+. .+|+.||||.+..... ...+.|.+|+.+|++++|||||++++++.+.+. .|+||
T Consensus 15 ~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~--~~iv~ 92 (293)
T d1jksa_ 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD--VILIL 92 (293)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEE
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE--EEEEE
Confidence 67899999999999997 6899999999854221 236789999999999999999999999998776 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
|||++|+|.++|
T Consensus 93 E~~~gg~L~~~i 104 (293)
T d1jksa_ 93 ELVAGGELFDFL 104 (293)
T ss_dssp ECCCSCBHHHHH
T ss_pred EcCCCccccchh
Confidence 999999999876
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=3.1e-14 Score=137.06 Aligned_cols=90 Identities=22% Similarity=0.334 Sum_probs=75.7
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEE
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 539 (555)
++.+++.. .+.||+|+||.||+|++.++..||||.++... ...+.|.+|+.+|++++|||||+++|+|.+ +. .+
T Consensus 14 i~~~~~~i--~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~--~~ 87 (285)
T d1fmka3 14 IPRESLRL--EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP--IY 87 (285)
T ss_dssp CCGGGEEE--EEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS--CE
T ss_pred cCHHHEEE--eeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CC--eE
Confidence 34455544 77899999999999999888889999997543 356789999999999999999999999854 44 89
Q ss_pred EEEeccCCCChhhhhC
Q 048796 540 LLADYIQGDSLALHLY 555 (555)
Q Consensus 540 lv~e~~~~GsL~~~l~ 555 (555)
+|||||++|+|..+++
T Consensus 88 lv~Ey~~~g~l~~~~~ 103 (285)
T d1fmka3 88 IVTEYMSKGSLLDFLK 103 (285)
T ss_dssp EEECCCTTCBHHHHHS
T ss_pred EEEEecCCCchhhhhh
Confidence 9999999999987763
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=4.8e-14 Score=135.76 Aligned_cols=80 Identities=20% Similarity=0.307 Sum_probs=68.4
Q ss_pred eeecCCceEEEEEEe---CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 472 VLGRSSHGTLYKATL---DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 472 ~lG~G~~g~vy~~~~---~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.||+|+||.||+|++ .++..||||.++... ....++|.+|+.+|++++|||||+++|+|.+ +. .|+|||||++
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~--~~lvmE~~~~ 92 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EA--LMLVMEMAGG 92 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SS--EEEEEECCTT
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-Ce--EEEEEEeCCC
Confidence 499999999999986 245679999997543 3446789999999999999999999999875 44 8999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 93 g~L~~~l 99 (285)
T d1u59a_ 93 GPLHKFL 99 (285)
T ss_dssp EEHHHHH
T ss_pred CcHHHHh
Confidence 9999876
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=99.47 E-value=2.7e-14 Score=141.61 Aligned_cols=83 Identities=22% Similarity=0.423 Sum_probs=75.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|+.||||.+........+.+.+|+.++++++|||||++++++.+.+. .|+|||||++|
T Consensus 31 ~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~--~~ivmE~~~gg 108 (350)
T d1koaa2 31 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNE--MVMIYEFMSGG 108 (350)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTE--EEEEECCCCSC
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE--EEEEEEcCCCC
Confidence 67899999999999997 6799999999987666667889999999999999999999999998776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 109 ~L~~~l 114 (350)
T d1koaa2 109 ELFEKV 114 (350)
T ss_dssp BHHHHH
T ss_pred CHHHHH
Confidence 998876
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=2.7e-14 Score=136.40 Aligned_cols=85 Identities=25% Similarity=0.336 Sum_probs=70.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||+||+|+. .+|+.||||.++... ....+.|.+|+.++++++|||||++++++.+......|+|||||+
T Consensus 9 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~ 88 (269)
T d2java1 9 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 88 (269)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCT
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCC
Confidence 57899999999999997 679999999996543 234567999999999999999999999987543323899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 89 ~g~L~~~i 96 (269)
T d2java1 89 GGDLASVI 96 (269)
T ss_dssp TEEHHHHH
T ss_pred CCcHHHHH
Confidence 99999875
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=1.5e-14 Score=137.55 Aligned_cols=88 Identities=20% Similarity=0.349 Sum_probs=72.8
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC-CCceE
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP-REQER 538 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~-~~~~~ 538 (555)
++.+|++. .+.||+|+||.||+|++ .|..||||+++... ..+.|.+|+.++++++|||||+++|+|... +. .
T Consensus 4 i~~~~~~~--~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~--~ 76 (262)
T d1byga_ 4 LNMKELKL--LQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG--L 76 (262)
T ss_dssp CCGGGEEE--EEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--C--C
T ss_pred cCHHHeEE--eEEEecCCCeEEEEEEE-CCeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCc--E
Confidence 34444444 67899999999999999 58899999996543 357899999999999999999999998643 44 8
Q ss_pred EEEEeccCCCChhhhh
Q 048796 539 LLLADYIQGDSLALHL 554 (555)
Q Consensus 539 ~lv~e~~~~GsL~~~l 554 (555)
++||||+++|+|.++|
T Consensus 77 ~lv~ey~~~g~L~~~l 92 (262)
T d1byga_ 77 YIVTEYMAKGSLVDYL 92 (262)
T ss_dssp EEEECCCTTEEHHHHH
T ss_pred EEEEeccCCCCHHHHH
Confidence 9999999999999886
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.46 E-value=1.4e-13 Score=114.78 Aligned_cols=77 Identities=23% Similarity=0.309 Sum_probs=38.2
Q ss_pred EEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCc
Q 048796 57 ILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNG 136 (555)
Q Consensus 57 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~ 136 (555)
.|+|++|+|+ .++ .+..+++|++|++++|+|+ .+|..+..+++|+.|++++|+|+. ++ .+..+++|+.|++++|.
T Consensus 2 ~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 2 VLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNR 76 (124)
T ss_dssp EEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSC
T ss_pred EEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCCc
Confidence 4555555555 222 2455555555555555555 334445555555555555555542 22 24444444444444444
Q ss_pred cc
Q 048796 137 FS 138 (555)
Q Consensus 137 l~ 138 (555)
++
T Consensus 77 i~ 78 (124)
T d1dcea3 77 LQ 78 (124)
T ss_dssp CC
T ss_pred cC
Confidence 43
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=3.5e-14 Score=136.25 Aligned_cols=81 Identities=21% Similarity=0.240 Sum_probs=67.4
Q ss_pred CeeecCCceEEEEEEeC---CCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATLD---SGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~---~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
+.||+|+||.||+|.+. .++.||||.++... ....++|.+|+.+|++++|||||+++|+|.. +. .++|||||
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~--~~lvmE~~ 89 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ES--WMLVMEMA 89 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SS--EEEEEECC
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CC--EEEEEEcC
Confidence 47999999999999863 35689999996432 2235789999999999999999999999975 44 79999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 90 ~~g~L~~~l 98 (277)
T d1xbba_ 90 ELGPLNKYL 98 (277)
T ss_dssp TTEEHHHHH
T ss_pred CCCcHHHHH
Confidence 999999876
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.46 E-value=3.9e-14 Score=137.51 Aligned_cols=83 Identities=22% Similarity=0.504 Sum_probs=70.5
Q ss_pred CCeeecCCceEEEEEEeC-CC---CEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD-SG---HMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g---~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|++. +| ..||||.+... .....+.|.+|+.+|++++|||||+++|+|...+. .++||||
T Consensus 31 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~--~~iv~Ey 108 (299)
T d1jpaa_ 31 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTP--VMIITEF 108 (299)
T ss_dssp EEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS--CEEEEEC
T ss_pred eeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE--EEEEEEe
Confidence 678999999999999973 33 36899998654 33446789999999999999999999999988777 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
|++|+|.+++
T Consensus 109 ~~~g~L~~~~ 118 (299)
T d1jpaa_ 109 MENGSLDSFL 118 (299)
T ss_dssp CTTEEHHHHH
T ss_pred cCCCcceeee
Confidence 9999998865
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=99.45 E-value=9.6e-14 Score=137.65 Aligned_cols=83 Identities=18% Similarity=0.389 Sum_probs=75.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|+.||||.++.......+.+.+|+.+|++++|||||++++++.+.+. .|+|||||++|
T Consensus 34 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~--~~ivmE~~~gg 111 (352)
T d1koba_ 34 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYE--MVLILEFLSGG 111 (352)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSE--EEEEEECCCCC
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE--EEEEEEcCCCC
Confidence 67899999999999997 6799999999977666567789999999999999999999999997776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 112 ~L~~~~ 117 (352)
T d1koba_ 112 ELFDRI 117 (352)
T ss_dssp BHHHHT
T ss_pred hHHHHH
Confidence 998765
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=7e-14 Score=137.03 Aligned_cols=83 Identities=23% Similarity=0.332 Sum_probs=73.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||+||+|+. .+|+.||||.++.... ....+.+|+.+|+.++|||||++++++.+.+. .|+|||||++|
T Consensus 10 ~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~--~~lvmE~~~gg 86 (321)
T d1tkia_ 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEE--LVMIFEFISGL 86 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTE--EEEEECCCCCC
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE--EEEEEecCCCC
Confidence 67899999999999997 5789999999976543 34668899999999999999999999998776 99999999999
Q ss_pred ChhhhhC
Q 048796 549 SLALHLY 555 (555)
Q Consensus 549 sL~~~l~ 555 (555)
+|.++|+
T Consensus 87 ~L~~~i~ 93 (321)
T d1tkia_ 87 DIFERIN 93 (321)
T ss_dssp BHHHHHT
T ss_pred cHHHHHH
Confidence 9998763
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=3.7e-14 Score=139.30 Aligned_cols=83 Identities=19% Similarity=0.352 Sum_probs=73.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||+||+|+. .+|+.||+|.++... ....+.+.+|+.+|+.++|||||+++++|.+.+. .++|||||++
T Consensus 11 ~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~--~~iVmEy~~g 88 (322)
T d1s9ja_ 11 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDG 88 (322)
T ss_dssp EEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSE--EEEEEECCTT
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE--EEEEEEcCCC
Confidence 57899999999999997 679999999996543 3335789999999999999999999999998776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 89 g~L~~~l 95 (322)
T d1s9ja_ 89 GSLDQVL 95 (322)
T ss_dssp EEHHHHH
T ss_pred CcHHHHH
Confidence 9999876
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.43 E-value=3.6e-14 Score=138.19 Aligned_cols=83 Identities=19% Similarity=0.344 Sum_probs=68.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.++||+|+||+||+|+. .+|+.||||.+..... ...+.+.+|+.+|++++|||||++++++.+.+. .|+|||||++
T Consensus 14 ~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~--~~lvmE~~~g 91 (307)
T d1a06a_ 14 RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGH--LYLIMQLVSG 91 (307)
T ss_dssp EEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEECCCCS
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE--EEEEEeccCC
Confidence 67899999999999997 5799999999965432 234668899999999999999999999998776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.++|
T Consensus 92 g~L~~~l 98 (307)
T d1a06a_ 92 GELFDRI 98 (307)
T ss_dssp CBHHHHH
T ss_pred CcHHHhh
Confidence 9999876
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=5.1e-14 Score=137.45 Aligned_cols=92 Identities=21% Similarity=0.306 Sum_probs=73.2
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEe-CCCC--EEEEEEeccC-ChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCC
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATL-DSGH--MLTVKWLRVG-LVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPR 534 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~-~~g~--~vavK~l~~~-~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~ 534 (555)
++++|+.. .++||+|+||.||+|++ .+|. .||||+++.. .....+.|.+|+.+|.++ +|||||+++|+|...+
T Consensus 7 i~~~~~~~--~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~ 84 (309)
T d1fvra_ 7 LDWNDIKF--QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 84 (309)
T ss_dssp CCGGGCEE--EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT
T ss_pred cCHHHcEE--EEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCC
Confidence 34455544 77999999999999998 3454 4788888543 333456899999999998 7999999999999877
Q ss_pred CceEEEEEeccCCCChhhhhC
Q 048796 535 EQERLLLADYIQGDSLALHLY 555 (555)
Q Consensus 535 ~~~~~lv~e~~~~GsL~~~l~ 555 (555)
. .++||||+++|+|.++|+
T Consensus 85 ~--~~iV~ey~~~g~L~~~l~ 103 (309)
T d1fvra_ 85 Y--LYLAIEYAPHGNLLDFLR 103 (309)
T ss_dssp E--EEEEECCCTTCBHHHHHH
T ss_pred e--eEEEEEecCCCcHHHHHh
Confidence 6 999999999999999873
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=1.6e-13 Score=130.99 Aligned_cols=85 Identities=20% Similarity=0.284 Sum_probs=71.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC--CCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP--REQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~--~~~~~~lv~e~ 544 (555)
.+.||+|+||+||+|+. .+++.||||.+... .....+.|.+|+.+|++++|||||++++++... +....++||||
T Consensus 14 ~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~ 93 (270)
T d1t4ha_ 14 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 93 (270)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred eeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeC
Confidence 45799999999999997 57899999998643 333457799999999999999999999998642 22247999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
|++|+|.+++
T Consensus 94 ~~~g~L~~~l 103 (270)
T d1t4ha_ 94 MTSGTLKTYL 103 (270)
T ss_dssp CCSCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999999876
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=6.4e-14 Score=135.02 Aligned_cols=83 Identities=17% Similarity=0.195 Sum_probs=73.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||+||+|+. .+|+.||||.+.... ....+.+.+|+.+|++++|||||++++++.+.+. .|+|||||
T Consensus 13 ~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~--~~ivmEy~ 90 (288)
T d1uu3a_ 13 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK--LYFGLSYA 90 (288)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCE--EEEEEEcc
Confidence 77999999999999997 679999999986432 2235779999999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 91 ~gg~L~~~~ 99 (288)
T d1uu3a_ 91 KNGELLKYI 99 (288)
T ss_dssp TTEEHHHHH
T ss_pred CCCCHHHhh
Confidence 999998875
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=1e-13 Score=132.77 Aligned_cols=80 Identities=29% Similarity=0.432 Sum_probs=69.1
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|++. ..||||+++.. .....+.|.+|+.+|++++|||||+++|++.. +. .++|||||++
T Consensus 13 ~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~--~~lv~Ey~~~ 87 (276)
T d1uwha_ 13 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQ--LAIVTQWCEG 87 (276)
T ss_dssp CSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SS--CEEEEECCCE
T ss_pred EEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cE--EEEEEecCCC
Confidence 789999999999999873 35999999643 23446789999999999999999999998864 44 8999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.++|
T Consensus 88 g~L~~~l 94 (276)
T d1uwha_ 88 SSLYHHL 94 (276)
T ss_dssp EEHHHHH
T ss_pred CCHHHHH
Confidence 9999886
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=4.3e-14 Score=136.27 Aligned_cols=210 Identities=17% Similarity=0.178 Sum_probs=148.7
Q ss_pred CcCCCCCCEEECCCCcCCCC----CCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCC-cCCCC-CCccccCCC
Q 048796 4 GINSTTLSVLNLSSNSLSGT----LPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSN-KLSGS-LPNLTSQFD 77 (555)
Q Consensus 4 ~~n~~~L~~L~Ls~N~l~~~----~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N-~l~~~-~~~~~~~l~ 77 (555)
.....+|++|||++|.++.. +....++|++|+|++|.+++.....+..+++|++|+|+++ .+++. +...+.+++
T Consensus 42 ~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~ 121 (284)
T d2astb2 42 HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 121 (284)
T ss_dssp CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCT
T ss_pred hccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHH
Confidence 34567899999999998753 2356789999999999998766666667789999999996 46532 223346789
Q ss_pred CccEEEeeCC-cCCCC-Cchhc-cCCCCccEEEcCCCc--CCCC-CchhhhCCCCCCeEEccCCc-ccccCCcCcccccc
Q 048796 78 RLSTFNIRNN-SVTGT-LPSLL-EISPRLVTLDVSSNQ--LKGP-IPDNFFSSMALTNLNLSGNG-FSGAIPLRSSHASE 150 (555)
Q Consensus 78 ~L~~L~L~~N-~l~~~-~~~~l-~~l~~L~~L~L~~N~--l~~~-~~~~~~~~~~L~~L~Ls~N~-l~~~~p~~~~~~~~ 150 (555)
+|++|+++++ .++.. +...+ ...++|+.|+++++. ++.. +...+..+++|+.|++++|. +++.....+.++
T Consensus 122 ~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~-- 199 (284)
T d2astb2 122 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQL-- 199 (284)
T ss_dssp TCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGC--
T ss_pred hccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhccc--
Confidence 9999999996 45422 22223 345789999999753 4322 22334568999999999874 665554444444
Q ss_pred ccccCCCCCcCEEEccCC-cCCCcCCccccCccccceeecccccccCC-CchhccCCCCCCEEeCCCCcCCCCCChhh
Q 048796 151 LLVLPSYPPMESLDLSGN-ALTGVLPSDIGNMGRLRLLNLANNHLSGK-MPSELSKLGALEYLDLSGNQFKGEIPDKL 226 (555)
Q Consensus 151 l~~l~~~~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 226 (555)
++|++|+|++| .+++.....++.+++|+.|+++++ ++.. +......+++|+ +..++++...+..+
T Consensus 200 -------~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~-~~d~~l~~l~~~lp~L~---i~~~~ls~~~~~~~ 266 (284)
T d2astb2 200 -------NYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHLQ---INCSHFTTIARPTI 266 (284)
T ss_dssp -------TTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTSE---ESCCCSCCTTCSSC
T ss_pred -------CcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC-CCHHHHHHHHHhCcccc---ccCccCCCCCCCcc
Confidence 89999999995 688776777889999999999988 4432 222234566654 57778886655443
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=3.2e-15 Score=153.79 Aligned_cols=85 Identities=24% Similarity=0.210 Sum_probs=45.7
Q ss_pred CCcCEEEccCCcCCCcCCccc----cCccccceeecccccccCC----Cchhcc-CCCCCCEEeCCCCcCCCC----CCh
Q 048796 158 PPMESLDLSGNALTGVLPSDI----GNMGRLRLLNLANNHLSGK----MPSELS-KLGALEYLDLSGNQFKGE----IPD 224 (555)
Q Consensus 158 ~~L~~L~Ls~N~l~~~~p~~~----~~l~~L~~L~L~~N~l~~~----~~~~~~-~l~~L~~L~Ls~N~l~~~----~p~ 224 (555)
..|+.+++++|.++......+ ....+|++|+|++|+|++. ++..+. ..+.|++|+|++|.|+.. ++.
T Consensus 312 ~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~ 391 (460)
T d1z7xw1 312 CQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA 391 (460)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred cccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHH
Confidence 356666666666554322222 2334677777777776532 222222 345577777777777642 122
Q ss_pred hhh--cCCCEEEeccCCCCC
Q 048796 225 KLS--LKLNEFNVSYNDLSG 242 (555)
Q Consensus 225 ~~~--~~L~~L~ls~N~l~~ 242 (555)
.+. ++|+.||+++|+|+.
T Consensus 392 ~l~~~~~L~~L~Ls~N~i~~ 411 (460)
T d1z7xw1 392 TLLANHSLRELDLSNNCLGD 411 (460)
T ss_dssp HHHHCCCCCEEECCSSSCCH
T ss_pred HHhcCCCCCEEECCCCcCCH
Confidence 222 567777777777654
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.39 E-value=1.8e-13 Score=133.20 Aligned_cols=82 Identities=23% Similarity=0.393 Sum_probs=71.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.++.... ...+.|.+|+.+|++++|||||++++++.+.+. .|+|||||
T Consensus 20 l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~--~~iv~E~~ 97 (309)
T d1u5ra_ 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT--AWLVMEYC 97 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE--EEEEEECC
T ss_pred eEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCE--EEEEEEec
Confidence 56899999999999997 6789999999965432 234679999999999999999999999988776 99999999
Q ss_pred CCCChhhh
Q 048796 546 QGDSLALH 553 (555)
Q Consensus 546 ~~GsL~~~ 553 (555)
++|+|..+
T Consensus 98 ~~g~l~~~ 105 (309)
T d1u5ra_ 98 LGSASDLL 105 (309)
T ss_dssp SEEHHHHH
T ss_pred CCCchHHH
Confidence 99988654
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.39 E-value=1.7e-13 Score=133.81 Aligned_cols=83 Identities=20% Similarity=0.360 Sum_probs=72.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+.+++.++|||||++++++.+.+. .|+|||||
T Consensus 9 ~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~--~~ivmE~~ 86 (316)
T d1fota_ 9 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQ--IFMIMDYI 86 (316)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCe--eeeEeeec
Confidence 67899999999999997 679999999996432 2345789999999999999999999999998777 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 87 ~gg~l~~~~ 95 (316)
T d1fota_ 87 EGGELFSLL 95 (316)
T ss_dssp CSCBHHHHH
T ss_pred CCccccccc
Confidence 999998765
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=3.1e-13 Score=131.71 Aligned_cols=84 Identities=25% Similarity=0.355 Sum_probs=69.6
Q ss_pred CCeeecCCceEEEEEEeCC--C--CEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLDS--G--HMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~--g--~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||+||+|++.+ + ..||||+++.. .....++|.+|+.+|++++|||||+++|+|...+. ..++||||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~-~~~lv~E~ 110 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPY 110 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTT-EEEEEEEC
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCC-ceEEEEEE
Confidence 5689999999999999732 2 36899999643 44456889999999999999999999999875432 38999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
|++|+|.+++
T Consensus 111 ~~~g~l~~~~ 120 (311)
T d1r0pa_ 111 MKHGDLRNFI 120 (311)
T ss_dssp CTTCBHHHHH
T ss_pred eecCchhhhh
Confidence 9999998875
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=2.4e-13 Score=133.79 Aligned_cols=83 Identities=20% Similarity=0.368 Sum_probs=73.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+.+|++++|||||++++++.+.+. .|+|||||
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~--~~iv~ey~ 87 (337)
T d1o6la_ 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDR--LCFVMEYA 87 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccc--cccceecc
Confidence 67899999999999997 689999999996432 2235778999999999999999999999998777 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 88 ~gg~L~~~~ 96 (337)
T d1o6la_ 88 NGGELFFHL 96 (337)
T ss_dssp TTCBHHHHH
T ss_pred CCCchhhhh
Confidence 999998875
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.39 E-value=2.3e-13 Score=130.33 Aligned_cols=83 Identities=24% Similarity=0.277 Sum_probs=71.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---------hcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---------RHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQER 538 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---------~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~ 538 (555)
.+.||+|+||+||+|+. .+|+.||||.++.... ...+.+.+|+.++++++ |||||++++++.+.+. .
T Consensus 8 ~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~--~ 85 (277)
T d1phka_ 8 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF--F 85 (277)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE--E
T ss_pred ceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcc--e
Confidence 67899999999999997 6899999999854321 12346889999999997 9999999999998777 9
Q ss_pred EEEEeccCCCChhhhh
Q 048796 539 LLLADYIQGDSLALHL 554 (555)
Q Consensus 539 ~lv~e~~~~GsL~~~l 554 (555)
|+|||||++|+|.++|
T Consensus 86 ~ivmE~~~~g~L~~~l 101 (277)
T d1phka_ 86 FLVFDLMKKGELFDYL 101 (277)
T ss_dssp EEEEECCTTCBHHHHH
T ss_pred EEEEEcCCCchHHHHH
Confidence 9999999999999886
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=2.6e-13 Score=130.61 Aligned_cols=83 Identities=23% Similarity=0.470 Sum_probs=70.4
Q ss_pred CCeeecCCceEEEEEEeCC-C----CEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATLDS-G----HMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~-g----~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.++||+|+||.||+|.+.. + ..||||+++... ....++|.+|+.++++++|||||+++|+|...+. .++|||
T Consensus 12 ~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~--~~~v~e 89 (283)
T d1mqba_ 12 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP--MMIITE 89 (283)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS--EEEEEE
T ss_pred eeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCc--eEEEEE
Confidence 6799999999999999732 2 469999996543 3345679999999999999999999999988777 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
||++|++.+++
T Consensus 90 ~~~~~~l~~~~ 100 (283)
T d1mqba_ 90 YMENGALDKFL 100 (283)
T ss_dssp CCTTEEHHHHH
T ss_pred ecccCcchhhh
Confidence 99999987754
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.38 E-value=4.6e-14 Score=140.05 Aligned_cols=210 Identities=18% Similarity=0.177 Sum_probs=150.4
Q ss_pred CCCCCEEEcCCCcCCCCC----cccccCCCCccEEEccCCcCCCC----------CCccccCCCCccEEEeeCCcCCCC-
Q 048796 28 LKSCVILDLSRNMISGDI----SDMQNWEANLEILDLSSNKLSGS----------LPNLTSQFDRLSTFNIRNNSVTGT- 92 (555)
Q Consensus 28 l~~L~~L~L~~N~l~~~~----~~~~~~~~~L~~L~Ls~N~l~~~----------~~~~~~~l~~L~~L~L~~N~l~~~- 92 (555)
...|+.|+|++|.|.... ...+...++|+.|+++++.+... +...+..+++|++|+|++|.++..
T Consensus 30 ~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 109 (344)
T d2ca6a1 30 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 109 (344)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccccccccc
Confidence 467999999999986532 23455667899999998865421 223345678999999999999865
Q ss_pred ---CchhccCCCCccEEEcCCCcCCCCCch-------------hhhCCCCCCeEEccCCcccccCCcCccccccccccCC
Q 048796 93 ---LPSLLEISPRLVTLDVSSNQLKGPIPD-------------NFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPS 156 (555)
Q Consensus 93 ---~~~~l~~l~~L~~L~L~~N~l~~~~~~-------------~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~ 156 (555)
+...+..+++|++|++++|.+...... .....+.|+.|.+++|.+....-..++. .+..
T Consensus 110 ~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~-----~l~~ 184 (344)
T d2ca6a1 110 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAK-----TFQS 184 (344)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHH-----HHHH
T ss_pred ccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccc-----hhhh
Confidence 334456778999999999987521111 1134678999999999886432222211 1223
Q ss_pred CCCcCEEEccCCcCCCc-----CCccccCccccceeecccccccCC----CchhccCCCCCCEEeCCCCcCCCCCChhhh
Q 048796 157 YPPMESLDLSGNALTGV-----LPSDIGNMGRLRLLNLANNHLSGK----MPSELSKLGALEYLDLSGNQFKGEIPDKLS 227 (555)
Q Consensus 157 ~~~L~~L~Ls~N~l~~~-----~p~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 227 (555)
++.|+.|+|++|.|+.. +...+..+++|+.|+|++|.++.. +...+..+++|++|+|++|.|++.....+.
T Consensus 185 ~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~ 264 (344)
T d2ca6a1 185 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV 264 (344)
T ss_dssp CTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHH
T ss_pred hhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHH
Confidence 48899999999998742 234567789999999999998643 345567889999999999999854333321
Q ss_pred --------cCCCEEEeccCCCCC
Q 048796 228 --------LKLNEFNVSYNDLSG 242 (555)
Q Consensus 228 --------~~L~~L~ls~N~l~~ 242 (555)
..|+.|++++|+++.
T Consensus 265 ~~l~~~~~~~L~~L~ls~N~i~~ 287 (344)
T d2ca6a1 265 DAFSKLENIGLQTLRLQYNEIEL 287 (344)
T ss_dssp HHHHTCSSCCCCEEECCSSCCBH
T ss_pred HHhhhccCCCCCEEECCCCcCCh
Confidence 469999999999864
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.37 E-value=1.8e-13 Score=133.32 Aligned_cols=91 Identities=18% Similarity=0.288 Sum_probs=75.6
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEeC------CCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEc
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATLD------SGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWG 532 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~ 532 (555)
+..+++.. .+.||+|+||.||+|++. +++.||||+++.. ..+....|.+|+.++++++|||||+++|+|..
T Consensus 17 i~~~~~~l--~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~ 94 (308)
T d1p4oa_ 17 VAREKITM--SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 94 (308)
T ss_dssp CCGGGEEE--EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS
T ss_pred ecHHHeEE--eeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEec
Confidence 44455544 678999999999999862 3578999999754 33345679999999999999999999999987
Q ss_pred CCCceEEEEEeccCCCChhhhh
Q 048796 533 PREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 533 ~~~~~~~lv~e~~~~GsL~~~l 554 (555)
.+. .++|||||++|+|.+++
T Consensus 95 ~~~--~~lv~e~~~~g~l~~~~ 114 (308)
T d1p4oa_ 95 GQP--TLVIMELMTRGDLKSYL 114 (308)
T ss_dssp SSS--CEEEEECCTTCBHHHHH
T ss_pred CCc--eeEEEeecCCCCHHHHH
Confidence 776 99999999999999876
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.37 E-value=2e-13 Score=133.22 Aligned_cols=90 Identities=24% Similarity=0.309 Sum_probs=75.2
Q ss_pred CHHHHhcccCCeeecCCceEEEEEEe------CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEc
Q 048796 461 TAEELSRAPAEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWG 532 (555)
Q Consensus 461 ~~~~l~~~~~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~ 532 (555)
..++++. .+.||+|+||.||+|++ .+++.||||+++... .....+|.+|+.++.++ +|||||+++|+|.+
T Consensus 21 ~~~~~~l--~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~ 98 (311)
T d1t46a_ 21 PRNRLSF--GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98 (311)
T ss_dssp CGGGEEE--EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHHHeEE--eeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEee
Confidence 3344444 77999999999999985 346789999997543 33466799999999998 69999999999998
Q ss_pred CCCceEEEEEeccCCCChhhhh
Q 048796 533 PREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 533 ~~~~~~~lv~e~~~~GsL~~~l 554 (555)
.+. .++|||||++|+|.++|
T Consensus 99 ~~~--~~lvmE~~~~g~l~~~l 118 (311)
T d1t46a_ 99 GGP--TLVITEYCCYGDLLNFL 118 (311)
T ss_dssp SSS--CEEEEECCTTEEHHHHH
T ss_pred CCE--EEEEEEcCCCCCHHHHH
Confidence 777 99999999999999876
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.37 E-value=3.4e-13 Score=130.99 Aligned_cols=83 Identities=23% Similarity=0.326 Sum_probs=72.7
Q ss_pred CCeeecCCceEEEEEEeC------CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|++. +++.||||+++.... ...++|.+|+.++++++||||++++++|...+. .+++|
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~--~~~v~ 95 (301)
T d1lufa_ 18 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP--MCLLF 95 (301)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS--CEEEE
T ss_pred eEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCc--eEEEE
Confidence 678999999999999862 457899999975433 346789999999999999999999999988777 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.++|
T Consensus 96 e~~~~g~L~~~l 107 (301)
T d1lufa_ 96 EYMAYGDLNEFL 107 (301)
T ss_dssp ECCTTCBHHHHH
T ss_pred EecCCCcHHHHH
Confidence 999999999886
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=3.1e-13 Score=132.70 Aligned_cols=83 Identities=24% Similarity=0.241 Sum_probs=68.8
Q ss_pred CCeeecCCceEEEEEEeC-CC-----CEEEEEEeccC-ChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD-SG-----HMLTVKWLRVG-LVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g-----~~vavK~l~~~-~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.++||+|+||.||+|++. .+ ..||||.+... .......|.+|+.+|.++ +|||||+++++|.+.+. .++|
T Consensus 42 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~--~~lv 119 (325)
T d1rjba_ 42 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP--IYLI 119 (325)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CEEE
T ss_pred eeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe--EEEE
Confidence 679999999999999862 22 36999998653 333457899999999998 89999999999998877 9999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
||||++|+|.++|
T Consensus 120 ~Ey~~~g~L~~~l 132 (325)
T d1rjba_ 120 FEYCCYGDLLNYL 132 (325)
T ss_dssp EECCTTCBHHHHH
T ss_pred EEcCCCCcHHHHH
Confidence 9999999999886
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=7.4e-13 Score=129.48 Aligned_cols=83 Identities=17% Similarity=0.384 Sum_probs=70.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHH-cCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIG-SMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~-~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||+||+|+. .+|+.||||.++... ....+.+..|+.++. .++|||||++++++.+.+. .|+||||
T Consensus 7 ~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~--~yivmEy 84 (320)
T d1xjda_ 7 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN--LFFVMEY 84 (320)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE--EEEEEEC
T ss_pred eeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCc--eeEEEee
Confidence 67899999999999997 579999999996432 223456777877765 6899999999999998877 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
|++|+|.+++
T Consensus 85 ~~~g~L~~~i 94 (320)
T d1xjda_ 85 LNGGDLMYHI 94 (320)
T ss_dssp CTTCBHHHHH
T ss_pred cCCCcHHHHh
Confidence 9999999886
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=1.3e-13 Score=141.59 Aligned_cols=148 Identities=22% Similarity=0.151 Sum_probs=94.8
Q ss_pred CCCCccEEEcCCCcCCCCC----chhhhCCCCCCeEEccCCcccccCCcCc--------ccccc---------------c
Q 048796 99 ISPRLVTLDVSSNQLKGPI----PDNFFSSMALTNLNLSGNGFSGAIPLRS--------SHASE---------------L 151 (555)
Q Consensus 99 ~l~~L~~L~L~~N~l~~~~----~~~~~~~~~L~~L~Ls~N~l~~~~p~~~--------~~~~~---------------l 151 (555)
....|+.|++++|.+.... ...+...+.++.+++++|.++......+ ..+.. +
T Consensus 253 ~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l 332 (460)
T d1z7xw1 253 PSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHF 332 (460)
T ss_dssp TTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccchhhhhhhhc
Confidence 3567889999998876321 2233445666677776666542110000 00000 0
Q ss_pred -cccCCCCCcCEEEccCCcCCCcC----Ccccc-CccccceeecccccccCC----CchhccCCCCCCEEeCCCCcCCCC
Q 048796 152 -LVLPSYPPMESLDLSGNALTGVL----PSDIG-NMGRLRLLNLANNHLSGK----MPSELSKLGALEYLDLSGNQFKGE 221 (555)
Q Consensus 152 -~~l~~~~~L~~L~Ls~N~l~~~~----p~~~~-~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~ 221 (555)
..+...++|++|+|++|.|++.. +..+. ..+.|+.|+|++|.|+.. +...+..+++|++|||++|+|+..
T Consensus 333 ~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~ 412 (460)
T d1z7xw1 333 SSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 412 (460)
T ss_dssp HHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred ccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCHH
Confidence 01123468999999999997532 22332 456799999999999853 344566779999999999999854
Q ss_pred CChhhh-------cCCCEEEeccCCCCCCcCc
Q 048796 222 IPDKLS-------LKLNEFNVSYNDLSGPIPE 246 (555)
Q Consensus 222 ~p~~~~-------~~L~~L~ls~N~l~~~~p~ 246 (555)
....+. ..|+.|++++|.+......
T Consensus 413 g~~~l~~~l~~~~~~L~~l~l~~~~~~~~~~~ 444 (460)
T d1z7xw1 413 GILQLVESVRQPGCLLEQLVLYDIYWSEEMED 444 (460)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTCCCCHHHHH
T ss_pred HHHHHHHHHHhCCCccCEEECCCCCCCHHHHH
Confidence 333332 3699999999999765443
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=4.9e-13 Score=129.86 Aligned_cols=84 Identities=21% Similarity=0.224 Sum_probs=65.7
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC--ceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE--QERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~--~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|++ +|+.||||+++.... ....+..|+..+..++|||||+++|+|...+. ...++|||||++
T Consensus 8 ~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~~-~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~ 85 (303)
T d1vjya_ 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEECCSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccC
Confidence 56899999999999998 689999999965322 12223345555668899999999999975432 247999999999
Q ss_pred CChhhhhC
Q 048796 548 DSLALHLY 555 (555)
Q Consensus 548 GsL~~~l~ 555 (555)
|+|.++|+
T Consensus 86 g~L~~~l~ 93 (303)
T d1vjya_ 86 GSLFDYLN 93 (303)
T ss_dssp CBHHHHHH
T ss_pred CCHHHHHh
Confidence 99998873
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.31 E-value=1.2e-12 Score=125.55 Aligned_cols=85 Identities=21% Similarity=0.263 Sum_probs=71.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC--ceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE--QERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~--~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .+|+.||||.++.... ...+.|.+|+.+++.++|||||++++++...+. ...|+|||
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE 91 (277)
T d1o6ya_ 12 GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 91 (277)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred eEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEE
Confidence 67899999999999997 6899999999975433 235679999999999999999999999875432 23789999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 92 ~~~g~~L~~~~ 102 (277)
T d1o6ya_ 92 YVDGVTLRDIV 102 (277)
T ss_dssp CCCEEEHHHHH
T ss_pred CCCCCEehhhh
Confidence 99999998765
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.31 E-value=5.4e-12 Score=109.56 Aligned_cols=61 Identities=28% Similarity=0.258 Sum_probs=28.0
Q ss_pred CCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCC
Q 048796 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFK 219 (555)
Q Consensus 158 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 219 (555)
++|+.|+|++|+|+.+.+.+|..+++|+.|+|++|+|+...+..|.. .+|+.|+|++|.+.
T Consensus 56 ~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~-~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 56 GELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG-LSLQELVLSGNPLH 116 (156)
T ss_dssp CCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS-CCCCEEECCSSCCC
T ss_pred cccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhcc-ccccccccCCCccc
Confidence 44444444444444444444555555555555555555322222322 24555555555553
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.31 E-value=1.4e-12 Score=124.65 Aligned_cols=82 Identities=15% Similarity=0.210 Sum_probs=68.7
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|++. .+..||||.++.... ...+.|.+|+.++++++|||||+++|+|.+ +. .++||||
T Consensus 12 ~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~--~~iv~E~ 88 (273)
T d1mp8a_ 12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NP--VWIIMEL 88 (273)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SS--CEEEEEC
T ss_pred EEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-Ce--EEEEEEe
Confidence 678999999999999873 245789999865433 345789999999999999999999999864 45 8999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 89 ~~~g~l~~~~ 98 (273)
T d1mp8a_ 89 CTLGELRSFL 98 (273)
T ss_dssp CTTEEHHHHH
T ss_pred ccCCcHHhhh
Confidence 9999998764
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.31 E-value=1.2e-14 Score=132.16 Aligned_cols=41 Identities=17% Similarity=0.190 Sum_probs=17.1
Q ss_pred cccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCC
Q 048796 72 LTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLK 114 (555)
Q Consensus 72 ~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 114 (555)
.+..+++|++|+|++|+|+.. + .+..+++|+.|+|++|+|+
T Consensus 43 sl~~L~~L~~L~Ls~n~I~~i-~-~l~~l~~L~~L~Ls~N~i~ 83 (198)
T d1m9la_ 43 TLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIK 83 (198)
T ss_dssp HHHHTTTCCEEECSEEEESCC-C-CHHHHTTCCEEECCEEEEC
T ss_pred HHhcccccceeECcccCCCCc-c-cccCCccccChhhcccccc
Confidence 344444444444444444422 1 2334444444444444443
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=1.2e-12 Score=126.86 Aligned_cols=82 Identities=22% Similarity=0.392 Sum_probs=67.2
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCChh-----cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR-----HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~-----~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
++||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+.++++++|||||++++++...+. .|+||||
T Consensus 4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~--~~ivmE~ 81 (299)
T d1ua2a_ 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN--ISLVFDF 81 (299)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC--CEEEEEC
T ss_pred eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCc--eeehhhh
Confidence 5799999999999997 57999999999653321 13468999999999999999999999988877 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|++..+.
T Consensus 82 ~~~~~~~~~~ 91 (299)
T d1ua2a_ 82 METDLEVIIK 91 (299)
T ss_dssp CSEEHHHHHT
T ss_pred hcchHHhhhh
Confidence 9998776543
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=6.7e-12 Score=122.59 Aligned_cols=82 Identities=23% Similarity=0.312 Sum_probs=66.8
Q ss_pred CCeeecCCceEEEEEEe-CCCC----EEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGH----MLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~----~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.++||+|+||+||+|++ .+|+ .||||+++.. ..+..++|.+|+.++++++|||||+++|+|.+. . .++++|
T Consensus 14 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~--~~~v~e 90 (317)
T d1xkka_ 14 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T--VQLITQ 90 (317)
T ss_dssp EEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-S--EEEEEE
T ss_pred eeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-C--eeEEEE
Confidence 67999999999999997 4554 5899988653 334568899999999999999999999999864 3 789999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+.+|+|.+++
T Consensus 91 ~~~~~~l~~~~ 101 (317)
T d1xkka_ 91 LMPFGCLLDYV 101 (317)
T ss_dssp CCTTCBHHHHH
T ss_pred eccCCcccccc
Confidence 99999998764
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=1.9e-12 Score=123.66 Aligned_cols=82 Identities=24% Similarity=0.310 Sum_probs=61.4
Q ss_pred CCeeecCCceEEEEEEe--CCC--CEEEEEEeccC---ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL--DSG--HMLTVKWLRVG---LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--~~g--~~vavK~l~~~---~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|++ .++ ..||||.+... .....++|.+|+.+|++++|||||+++|+|.+ +. .++||
T Consensus 13 ~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~--~~lv~ 89 (273)
T d1u46a_ 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PP--MKMVT 89 (273)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS--CEEEE
T ss_pred EEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cc--hheee
Confidence 56899999999999986 333 36899988643 22335789999999999999999999999975 34 79999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
|||++|++.+++
T Consensus 90 e~~~~~~l~~~~ 101 (273)
T d1u46a_ 90 ELAPLGSLLDRL 101 (273)
T ss_dssp ECCTTCBHHHHH
T ss_pred eeecCcchhhhh
Confidence 999999998764
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.25 E-value=1.5e-11 Score=106.74 Aligned_cols=103 Identities=21% Similarity=0.246 Sum_probs=50.4
Q ss_pred EEEcCCCcCCCCCcccccCCCCccEEEccCCc-CCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCC
Q 048796 33 ILDLSRNMISGDISDMQNWEANLEILDLSSNK-LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSN 111 (555)
Q Consensus 33 ~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 111 (555)
.++++++++...+.. +..+++|++|+|++|+ |+...+..|.++++|+.|+|++|+|+.+.+..|..+++|++|+|++|
T Consensus 12 ~l~c~~~~~~~~p~~-l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N 90 (156)
T d2ifga3 12 GLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (156)
T ss_dssp CEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred eEEecCCCCccCccc-ccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCC
Confidence 455555555433322 2333445555554443 54444445555555555555555555444555555555555555555
Q ss_pred cCCCCCchhhhCCCCCCeEEccCCcc
Q 048796 112 QLKGPIPDNFFSSMALTNLNLSGNGF 137 (555)
Q Consensus 112 ~l~~~~~~~~~~~~~L~~L~Ls~N~l 137 (555)
+|+ .+|.......+|+.|+|++|.+
T Consensus 91 ~l~-~l~~~~~~~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 91 ALE-SLSWKTVQGLSLQELVLSGNPL 115 (156)
T ss_dssp CCS-CCCSTTTCSCCCCEEECCSSCC
T ss_pred CCc-ccChhhhccccccccccCCCcc
Confidence 555 2333333333455555555544
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.25 E-value=3.6e-12 Score=126.74 Aligned_cols=83 Identities=22% Similarity=0.362 Sum_probs=68.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHH---HHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAK---EVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~---ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.++||+|+||.||+|+. .+|+.||||++.... ......+.+ |+.+++.++|||||++++++.+.+. .|+||
T Consensus 9 ~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~--~~ivm 86 (364)
T d1omwa3 9 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK--LSFIL 86 (364)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE--EEEEE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCE--EEEEE
Confidence 67899999999999997 579999999985422 122333444 4677888899999999999998776 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
|||++|+|.++|
T Consensus 87 E~~~gg~L~~~l 98 (364)
T d1omwa3 87 DLMNGGDLHYHL 98 (364)
T ss_dssp CCCCSCBHHHHH
T ss_pred EecCCCcHHHHH
Confidence 999999999876
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=2.7e-12 Score=124.34 Aligned_cols=83 Identities=18% Similarity=0.245 Sum_probs=65.6
Q ss_pred CCeeecCCceEEEEEEeC--------CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEE
Q 048796 470 AEVLGRSSHGTLYKATLD--------SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~--------~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 539 (555)
.+.||+|+||.||+|+.. ++..||||+++.... ....++.+|...+.++ +|||||+++++|.+.+. .+
T Consensus 18 ~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~--~~ 95 (299)
T d1fgka_ 18 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP--LY 95 (299)
T ss_dssp EEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CE
T ss_pred eeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCe--EE
Confidence 678999999999999852 124799999976443 3457899999998888 89999999999998777 99
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+|||||++|+|.++|
T Consensus 96 ~v~e~~~~g~l~~~i 110 (299)
T d1fgka_ 96 VIVEYASKGNLREYL 110 (299)
T ss_dssp EEECCCTTCBHHHHH
T ss_pred EEEEccCCCcHHHHH
Confidence 999999999999886
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.22 E-value=8e-12 Score=123.52 Aligned_cols=83 Identities=19% Similarity=0.336 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.+|+.++|||||++++++..... .++|+||+
T Consensus 46 ~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~--~~~v~e~~ 123 (350)
T d1rdqe_ 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYV 123 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccc--cccccccc
Confidence 67899999999999997 679999999986432 2235678999999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
.+|+|.+++
T Consensus 124 ~~g~l~~~l 132 (350)
T d1rdqe_ 124 AGGEMFSHL 132 (350)
T ss_dssp TTCBHHHHH
T ss_pred cccchhhhH
Confidence 999998875
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=99.22 E-value=8.4e-12 Score=120.05 Aligned_cols=82 Identities=22% Similarity=0.321 Sum_probs=71.4
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||+||+|+..+|+.||||.++.... ...+.|.+|+.+|++++|||||++++++...+. .++++||+.+
T Consensus 7 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~--~~i~~e~~~~ 84 (286)
T d1ob3a_ 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKR--LVLVFEHLDQ 84 (286)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSC--EEEEEECCSE
T ss_pred ccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCc--eeEEEEeehh
Confidence 568999999999999998899999999965432 235789999999999999999999999998877 9999999998
Q ss_pred CChhhh
Q 048796 548 DSLALH 553 (555)
Q Consensus 548 GsL~~~ 553 (555)
+.+..+
T Consensus 85 ~~~~~~ 90 (286)
T d1ob3a_ 85 DLKKLL 90 (286)
T ss_dssp EHHHHH
T ss_pred hhHHHH
Confidence 766554
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.22 E-value=1.7e-13 Score=124.32 Aligned_cols=128 Identities=23% Similarity=0.283 Sum_probs=97.7
Q ss_pred ccEEEeeCC--cCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCC
Q 048796 79 LSTFNIRNN--SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPS 156 (555)
Q Consensus 79 L~~L~L~~N--~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~ 156 (555)
++.+++.++ .+. .++..+..+++|++|+|++|+|+ .++ .+..+++|+.|+|++|.|+. ++.....+
T Consensus 25 ~~~~~l~~~~~~i~-~l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~~-i~~~~~~~-------- 92 (198)
T d1m9la_ 25 AEKVELHGMIPPIE-KMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIKK-IENLDAVA-------- 92 (198)
T ss_dssp CSCEECCBCCTTCC-CCHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEECS-CSSHHHHH--------
T ss_pred cceeeeecccCchh-hhhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhccccccc-cccccccc--------
Confidence 444555443 233 45677888999999999999998 444 58889999999999999873 34322222
Q ss_pred CCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCc-hhccCCCCCCEEeCCCCcCCCC
Q 048796 157 YPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMP-SELSKLGALEYLDLSGNQFKGE 221 (555)
Q Consensus 157 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~ 221 (555)
++|+.|++++|.++.. ..+..+++|+.|+|++|+|+.... ..+..+++|+.|++++|++...
T Consensus 93 -~~L~~L~l~~N~i~~l--~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~ 155 (198)
T d1m9la_ 93 -DTLEELWISYNQIASL--SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp -HHCCEEECSEEECCCH--HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHH
T ss_pred -cccccccccccccccc--ccccccccccccccccchhccccccccccCCCccceeecCCCccccC
Confidence 6789999999999864 457888999999999999985322 4688899999999999988643
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=5.3e-12 Score=124.11 Aligned_cols=80 Identities=19% Similarity=0.257 Sum_probs=66.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHc-CCCCcceeeeEEEEc--CCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGS-MRHPNIVPLRAYYWG--PREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~-l~H~niv~l~g~~~~--~~~~~~~lv~e~~ 545 (555)
.++||+|+||+||+|+. .+|+.||||.++. .+.+.+|+.++.+ .+|||||++++++.+ ......|+|||||
T Consensus 17 ~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~ 91 (335)
T d2ozaa1 17 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 91 (335)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred eEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECC
Confidence 35799999999999997 6799999999864 3457789988655 589999999999864 2222389999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+||+|.++|
T Consensus 92 ~gg~L~~~i 100 (335)
T d2ozaa1 92 DGGELFSRI 100 (335)
T ss_dssp CSEEHHHHH
T ss_pred CCCcHHHHH
Confidence 999999886
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.20 E-value=1e-11 Score=120.20 Aligned_cols=79 Identities=23% Similarity=0.371 Sum_probs=66.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|+.++++++|||||++++++.+.+. .|+||||+.
T Consensus 7 ~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~--~~iv~e~~~ 84 (298)
T d1gz8a_ 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLH 84 (298)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTE--EEEEEECCS
T ss_pred ccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccc--eeEEEeecC
Confidence 56899999999999997 6899999999965332 235789999999999999999999999998776 999999998
Q ss_pred CCCh
Q 048796 547 GDSL 550 (555)
Q Consensus 547 ~GsL 550 (555)
++.+
T Consensus 85 ~~~~ 88 (298)
T d1gz8a_ 85 QDLK 88 (298)
T ss_dssp EEHH
T ss_pred Cchh
Confidence 7543
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.15 E-value=2.8e-11 Score=118.75 Aligned_cols=82 Identities=22% Similarity=0.335 Sum_probs=70.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||+||+|+. .+|+.||||+++... .+.+.+|+.+|..++ ||||+++++++........++|||||++
T Consensus 40 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~ 116 (328)
T d3bqca1 40 VRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNN 116 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCS
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCC
Confidence 67899999999999997 679999999997543 467899999999995 9999999999875443348999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.++.
T Consensus 117 ~~L~~~~ 123 (328)
T d3bqca1 117 TDFKQLY 123 (328)
T ss_dssp CBGGGTT
T ss_pred CcHHHHh
Confidence 9997753
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=1.9e-11 Score=118.23 Aligned_cols=84 Identities=21% Similarity=0.322 Sum_probs=66.0
Q ss_pred CCeeecCCceEEEEEEeC------CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|+..+.++ +|+|||.+++++...+. ..++|
T Consensus 18 ~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~-~~~iv 96 (299)
T d1ywna1 18 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVI 96 (299)
T ss_dssp EEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS-CCEEE
T ss_pred eeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC-eEEEE
Confidence 678999999999999862 346899999975433 3456788888887776 78999999999876442 38999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
||||++|+|.++|
T Consensus 97 ~E~~~~g~L~~~l 109 (299)
T d1ywna1 97 VEFCKFGNLSTYL 109 (299)
T ss_dssp EECCTTCBHHHHH
T ss_pred EEecCCCcHHHHH
Confidence 9999999999886
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.12 E-value=5.6e-11 Score=114.45 Aligned_cols=83 Identities=19% Similarity=0.292 Sum_probs=71.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+.+++.++||||++++++|..... .++++||+.
T Consensus 7 i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~--~~iv~~~~~ 84 (292)
T d1unla_ 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK--LTLVFEFCD 84 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEEECCS
T ss_pred eeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccc--eeEEeeecc
Confidence 56899999999999997 689999999985432 2346789999999999999999999999998777 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+++|..++
T Consensus 85 ~~~l~~~~ 92 (292)
T d1unla_ 85 QDLKKYFD 92 (292)
T ss_dssp EEHHHHHH
T ss_pred cccccccc
Confidence 98887654
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=6e-11 Score=117.15 Aligned_cols=85 Identities=18% Similarity=0.169 Sum_probs=66.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC--ceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE--QERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~--~~~~lv~e~~ 545 (555)
.+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+.+|+.++||||+++++++..... ...+++++|+
T Consensus 13 ~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~ 92 (345)
T d1pmea_ 13 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHL 92 (345)
T ss_dssp EEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEEC
T ss_pred EEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEee
Confidence 67899999999999986 689999999996533 3346789999999999999999999999865432 1135556678
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
.+|+|.+++
T Consensus 93 ~~g~L~~~l 101 (345)
T d1pmea_ 93 MGADLYKLL 101 (345)
T ss_dssp CCEEHHHHH
T ss_pred cCCchhhhh
Confidence 899999876
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=3.7e-11 Score=117.29 Aligned_cols=83 Identities=25% Similarity=0.433 Sum_probs=70.5
Q ss_pred CCeeecCCceEEEEEEe----CCCCEEEEEEeccCC----hhcHHHHHHHHHHHHcCCC-CcceeeeEEEEcCCCceEEE
Q 048796 470 AEVLGRSSHGTLYKATL----DSGHMLTVKWLRVGL----VRHKKEFAKEVKKIGSMRH-PNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~----~~~~~~~~~ei~~l~~l~H-~niv~l~g~~~~~~~~~~~l 540 (555)
.+.||+|+||.||+|+. .+|+.||||.++... ....+.+.+|+.++++++| |||+++++++.+... .++
T Consensus 29 ~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~--~~~ 106 (322)
T d1vzoa_ 29 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK--LHL 106 (322)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE--EEE
T ss_pred EEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc--eee
Confidence 67999999999999985 258899999986432 1235678899999999977 899999999988777 999
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
++|||.+|+|.+++
T Consensus 107 v~e~~~~~~L~~~i 120 (322)
T d1vzoa_ 107 ILDYINGGELFTHL 120 (322)
T ss_dssp EECCCCSCBHHHHH
T ss_pred eeecccccHHHHHH
Confidence 99999999998876
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=2.2e-11 Score=116.20 Aligned_cols=83 Identities=13% Similarity=0.256 Sum_probs=67.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh------hcHHHHHHHHHHHHcCC--CCcceeeeEEEEcCCCceEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV------RHKKEFAKEVKKIGSMR--HPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~ei~~l~~l~--H~niv~l~g~~~~~~~~~~~l 540 (555)
.++||+|+||.||+|+. .+|+.||||.++.... .....+.+|+.++++++ |||||++++++.+.+. .++
T Consensus 9 ~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~--~~l 86 (273)
T d1xwsa_ 9 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS--FVL 86 (273)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE--EEE
T ss_pred eEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe--EEE
Confidence 67899999999999997 6899999999864321 11244678999999986 8999999999998776 999
Q ss_pred EEeccCC-CChhhhh
Q 048796 541 LADYIQG-DSLALHL 554 (555)
Q Consensus 541 v~e~~~~-GsL~~~l 554 (555)
||||+.+ +++.+++
T Consensus 87 v~e~~~~~~~l~~~~ 101 (273)
T d1xwsa_ 87 ILERPEPVQDLFDFI 101 (273)
T ss_dssp EEECCSSEEEHHHHH
T ss_pred EEEeccCcchHHHHH
Confidence 9999986 5666553
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=9.8e-11 Score=114.23 Aligned_cols=83 Identities=19% Similarity=0.289 Sum_probs=65.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC------CceEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR------EQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~------~~~~~l 540 (555)
.+.||+|+||+||+|+. .+|+.||||++... .....+.+.+|+.+|++++||||+++++++.... ....++
T Consensus 15 ~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~i 94 (318)
T d3blha1 15 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 94 (318)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEE
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEE
Confidence 67899999999999997 68999999998543 2234577899999999999999999999986532 113799
Q ss_pred EEeccCCCChhh
Q 048796 541 LADYIQGDSLAL 552 (555)
Q Consensus 541 v~e~~~~GsL~~ 552 (555)
||||+++|.+..
T Consensus 95 v~e~~~~~~~~~ 106 (318)
T d3blha1 95 VFDFCEHDLAGL 106 (318)
T ss_dssp EEECCCEEHHHH
T ss_pred EEeccCCCccch
Confidence 999999876654
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=1.2e-10 Score=115.53 Aligned_cols=82 Identities=17% Similarity=0.202 Sum_probs=65.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC----CceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR----EQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~----~~~~~lv~ 542 (555)
.++||+|+||+||+|+. .+|+.||||++... .....+.+.+|+.++++++|||||++++++...+ ....|+||
T Consensus 22 ~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~ 101 (355)
T d2b1pa1 22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 101 (355)
T ss_dssp EEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEE
T ss_pred EEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEE
Confidence 57899999999999997 57999999999643 2334567899999999999999999999986432 12489999
Q ss_pred eccCCCChh
Q 048796 543 DYIQGDSLA 551 (555)
Q Consensus 543 e~~~~GsL~ 551 (555)
|||.+|.+.
T Consensus 102 Ey~~~~l~~ 110 (355)
T d2b1pa1 102 ELMDANLCQ 110 (355)
T ss_dssp ECCSEEHHH
T ss_pred eccchHHHH
Confidence 999876544
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=5.6e-11 Score=117.56 Aligned_cols=86 Identities=21% Similarity=0.286 Sum_probs=70.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC---ceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE---QERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~---~~~~lv~e 543 (555)
.+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+.+++.++|||||++++++..... ...+++++
T Consensus 23 ~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~ 102 (348)
T d2gfsa1 23 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102 (348)
T ss_dssp EEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEE
Confidence 67899999999999996 689999999996542 2345678999999999999999999999864321 12567788
Q ss_pred ccCCCChhhhhC
Q 048796 544 YIQGDSLALHLY 555 (555)
Q Consensus 544 ~~~~GsL~~~l~ 555 (555)
|+.+|+|.++++
T Consensus 103 ~~~gg~L~~~~~ 114 (348)
T d2gfsa1 103 HLMGADLNNIVK 114 (348)
T ss_dssp ECCSEEHHHHHT
T ss_pred eecCCchhhhcc
Confidence 899999998763
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.03 E-value=9.3e-11 Score=115.96 Aligned_cols=78 Identities=28% Similarity=0.460 Sum_probs=62.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC----CceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR----EQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~----~~~~~lv~e~ 544 (555)
.++||+|+||+||+|+. .+|+.||||++..... .+.+|+.+|++++|||||++++++.... ...+++||||
T Consensus 25 ~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey 100 (350)
T d1q5ka_ 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 100 (350)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEEC
T ss_pred eeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEec
Confidence 56899999999999998 5799999999965432 2347999999999999999999985422 2237899999
Q ss_pred cCCCChh
Q 048796 545 IQGDSLA 551 (555)
Q Consensus 545 ~~~GsL~ 551 (555)
|++|.+.
T Consensus 101 ~~~~~~~ 107 (350)
T d1q5ka_ 101 VPETVYR 107 (350)
T ss_dssp CSEEHHH
T ss_pred cCCccHH
Confidence 9976433
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.03 E-value=9.3e-11 Score=115.81 Aligned_cols=83 Identities=19% Similarity=0.271 Sum_probs=61.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 542 (555)
.+.||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|+.+|+.++|||||+++++|...+. .+.++||
T Consensus 23 i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~ 102 (346)
T d1cm8a_ 23 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 102 (346)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEE
Confidence 57899999999999997 67999999999653 22345678999999999999999999999976542 1379999
Q ss_pred eccCCCChhhh
Q 048796 543 DYIQGDSLALH 553 (555)
Q Consensus 543 e~~~~GsL~~~ 553 (555)
||+ +++|.++
T Consensus 103 e~~-~~~l~~~ 112 (346)
T d1cm8a_ 103 PFM-GTDLGKL 112 (346)
T ss_dssp ECC-SEEHHHH
T ss_pred ecc-cccHHHH
Confidence 999 4466554
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.83 E-value=1.5e-09 Score=104.31 Aligned_cols=80 Identities=16% Similarity=0.217 Sum_probs=66.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCC-CcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRH-PNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H-~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ..+.+.+|++.+..++| +|++.+++++..... .++||||+ +
T Consensus 10 ~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~--~~~vme~~-~ 84 (293)
T d1csna_ 10 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH--NVLVIDLL-G 84 (293)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTE--EEEEEECC-C
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCc--cEEEEEec-C
Confidence 67899999999999997 578999999885432 23457788889999876 899999999887776 89999999 5
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 85 ~~l~~~~ 91 (293)
T d1csna_ 85 PSLEDLL 91 (293)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 7888765
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.83 E-value=7e-10 Score=107.32 Aligned_cols=82 Identities=23% Similarity=0.318 Sum_probs=60.6
Q ss_pred CCeeecCCceEEEEEEe-CC-CCEEEEEEeccCC--hhcHHHHHHHHHHHHc---CCCCcceeeeEEEEcC---CCceEE
Q 048796 470 AEVLGRSSHGTLYKATL-DS-GHMLTVKWLRVGL--VRHKKEFAKEVKKIGS---MRHPNIVPLRAYYWGP---REQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~-g~~vavK~l~~~~--~~~~~~~~~ei~~l~~---l~H~niv~l~g~~~~~---~~~~~~ 539 (555)
.+.||+|+||+||+|+. .+ ++.||||.++... ......+.+|+.+++. .+||||++++++|... .....+
T Consensus 12 ~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~ 91 (305)
T d1blxa_ 12 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 91 (305)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred EEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEE
Confidence 67899999999999997 44 6679999985432 1223446677766654 5899999999998532 122389
Q ss_pred EEEeccCCCChh
Q 048796 540 LLADYIQGDSLA 551 (555)
Q Consensus 540 lv~e~~~~GsL~ 551 (555)
+++||+++|.+.
T Consensus 92 ~~~e~~~~~~~~ 103 (305)
T d1blxa_ 92 LVFEHVDQDLTT 103 (305)
T ss_dssp EEEECCSCBHHH
T ss_pred EEEEeccCCchh
Confidence 999999998764
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.76 E-value=4.4e-09 Score=101.25 Aligned_cols=79 Identities=18% Similarity=0.174 Sum_probs=61.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEE-EcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYY-WGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~-~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... .+++..|+++++.++|+|++..++.| ...+. .++||||+.+
T Consensus 12 ~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~--~~ivme~~~~ 87 (299)
T d1ckia_ 12 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDY--NVMVMELLGP 87 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTE--EEEEEECCCC
T ss_pred eEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCE--EEEEEEEcCC
Confidence 67899999999999997 6789999998865432 34578999999999988877766665 44444 8899999955
Q ss_pred CChhhh
Q 048796 548 DSLALH 553 (555)
Q Consensus 548 GsL~~~ 553 (555)
++.+.
T Consensus 88 -~l~~~ 92 (299)
T d1ckia_ 88 -SLEDL 92 (299)
T ss_dssp -BHHHH
T ss_pred -chhhh
Confidence 55543
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.33 E-value=1.4e-08 Score=88.10 Aligned_cols=16 Identities=38% Similarity=0.605 Sum_probs=6.8
Q ss_pred CCCCccEEEcCCCcCC
Q 048796 99 ISPRLVTLDVSSNQLK 114 (555)
Q Consensus 99 ~l~~L~~L~L~~N~l~ 114 (555)
.+++|++|+|++|+|+
T Consensus 63 ~~~~L~~L~Ls~N~i~ 78 (162)
T d1koha1 63 NIPELLSLNLSNNRLY 78 (162)
T ss_dssp HCTTCCCCCCCSSCCC
T ss_pred hCCCCCEeeCCCcccc
Confidence 3344444444444443
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.32 E-value=4.1e-07 Score=80.83 Aligned_cols=77 Identities=13% Similarity=0.224 Sum_probs=58.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh------------------hcHHHHHHHHHHHHcCCCCcceeeeEEEE
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV------------------RHKKEFAKEVKKIGSMRHPNIVPLRAYYW 531 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~------------------~~~~~~~~ei~~l~~l~H~niv~l~g~~~ 531 (555)
++.||+|+||.||+|+..+|+.||||.++.... .....+..|...+.++.|.+++..+++.
T Consensus 5 g~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~- 83 (191)
T d1zara2 5 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE- 83 (191)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE-
T ss_pred CCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec-
Confidence 678999999999999988899999998753211 0123456788899999999999887642
Q ss_pred cCCCceEEEEEeccCCCChhh
Q 048796 532 GPREQERLLLADYIQGDSLAL 552 (555)
Q Consensus 532 ~~~~~~~~lv~e~~~~GsL~~ 552 (555)
. .+++|||++++.+.+
T Consensus 84 ---~--~~lvme~~~~~~~~~ 99 (191)
T d1zara2 84 ---G--NAVLMELIDAKELYR 99 (191)
T ss_dssp ---T--TEEEEECCCCEEGGG
T ss_pred ---C--CEEEEEeeccccccc
Confidence 2 479999999876543
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.29 E-value=1.6e-08 Score=87.66 Aligned_cols=38 Identities=37% Similarity=0.344 Sum_probs=16.8
Q ss_pred CCcCEEEccCCcCCCcCCccccCccccceeeccccccc
Q 048796 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLS 195 (555)
Q Consensus 158 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 195 (555)
++|+.|+|++|.|+...+-.+.....|+.|++++|.++
T Consensus 91 ~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~ 128 (162)
T d1koha1 91 PNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS 128 (162)
T ss_dssp TTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTS
T ss_pred CcccccccccCccccchhhhhhhccccceeecCCCCcC
Confidence 44455555555554332222222334455555555554
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.24 E-value=3.1e-07 Score=90.40 Aligned_cols=79 Identities=14% Similarity=0.101 Sum_probs=60.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-----------CCcceeeeEEEEcCCCce
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-----------HPNIVPLRAYYWGPREQE 537 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-----------H~niv~l~g~~~~~~~~~ 537 (555)
.++||+|+||+||+|+. .+|+.||||+++.... ..+.+.+|+.++..++ |+||+++++++.......
T Consensus 18 ~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~-~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~ 96 (362)
T d1q8ya_ 18 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNG 96 (362)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTE
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEecccc-chHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccc
Confidence 67999999999999997 6899999999975432 3467788998888775 578999998876443333
Q ss_pred EEEEEeccCCCC
Q 048796 538 RLLLADYIQGDS 549 (555)
Q Consensus 538 ~~lv~e~~~~Gs 549 (555)
.+++++++..+.
T Consensus 97 ~~~~~~~~~~~~ 108 (362)
T d1q8ya_ 97 VHVVMVFEVLGE 108 (362)
T ss_dssp EEEEEEECCCCE
T ss_pred eeeeeeeccccc
Confidence 677777776554
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.95 E-value=2.2e-06 Score=74.11 Aligned_cols=61 Identities=18% Similarity=0.270 Sum_probs=27.1
Q ss_pred CCccEEEccCCcCCC----CCCccccCCCCccEEEeeCCcCCCC----CchhccCCCCccEEEcCCCcC
Q 048796 53 ANLEILDLSSNKLSG----SLPNLTSQFDRLSTFNIRNNSVTGT----LPSLLEISPRLVTLDVSSNQL 113 (555)
Q Consensus 53 ~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l 113 (555)
++|+.|+|++|.+.. .+...+...+.|++|+|++|.|+.. +...+...++|++|+|++|.+
T Consensus 44 ~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~ 112 (167)
T d1pgva_ 44 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQ 112 (167)
T ss_dssp SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSS
T ss_pred CccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcC
Confidence 345555555555442 1112233344455555555555422 122334445555555555543
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.87 E-value=2.3e-06 Score=73.98 Aligned_cols=11 Identities=18% Similarity=-0.046 Sum_probs=4.9
Q ss_pred CCCCCEEeCCC
Q 048796 205 LGALEYLDLSG 215 (555)
Q Consensus 205 l~~L~~L~Ls~ 215 (555)
.++|+.|+++.
T Consensus 130 n~sL~~l~l~~ 140 (167)
T d1pgva_ 130 NESLLRVGISF 140 (167)
T ss_dssp CSSCCEEECCC
T ss_pred CCCccEeeCcC
Confidence 34444444443
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.26 E-value=2.4e-05 Score=67.23 Aligned_cols=39 Identities=10% Similarity=0.290 Sum_probs=16.6
Q ss_pred CCCccEEEccCCcCCCC----CCccccCCCCccEEEeeCCcCC
Q 048796 52 EANLEILDLSSNKLSGS----LPNLTSQFDRLSTFNIRNNSVT 90 (555)
Q Consensus 52 ~~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~ 90 (555)
.++|++|+|++|.++.. +...+...+.++.|++++|.++
T Consensus 45 n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~ 87 (166)
T d1io0a_ 45 NTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 87 (166)
T ss_dssp CCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred CCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccccc
Confidence 34455555555544321 1122233344555555554443
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.26 E-value=1.5e-05 Score=68.51 Aligned_cols=16 Identities=25% Similarity=0.063 Sum_probs=8.6
Q ss_pred ccCCCCCCEEeCCCCc
Q 048796 202 LSKLGALEYLDLSGNQ 217 (555)
Q Consensus 202 ~~~l~~L~~L~Ls~N~ 217 (555)
+...++|+.|+++.+.
T Consensus 128 L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 128 LEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HHHCSSCCEEECCCSS
T ss_pred HHhCCCcCEEeCcCCC
Confidence 3445566666665443
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=83.91 E-value=0.87 Score=40.16 Aligned_cols=72 Identities=11% Similarity=-0.006 Sum_probs=49.1
Q ss_pred ceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEeccCCCChhh
Q 048796 478 HGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYIQGDSLAL 552 (555)
Q Consensus 478 ~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~~~GsL~~ 552 (555)
.+.||+... +++.+.||+...........+.+|...+..+. |--+.+++.++...+. .++||+++++..+.+
T Consensus 27 ~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~--~~lv~~~l~G~~~~~ 99 (263)
T d1j7la_ 27 PAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGW--SNLLMSEADGVLCSE 99 (263)
T ss_dssp SSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTE--EEEEEECCSSEEHHH
T ss_pred CCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCc--eEEEEEecccccccc
Confidence 368998875 56778889886544434445677877766553 3334566776666555 899999999977654
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=81.01 E-value=2.9 Score=36.25 Aligned_cols=68 Identities=15% Similarity=0.178 Sum_probs=46.7
Q ss_pred eEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCC--CcceeeeEEEEcCCCceEEEEEeccCCCChh
Q 048796 479 GTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRH--PNIVPLRAYYWGPREQERLLLADYIQGDSLA 551 (555)
Q Consensus 479 g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H--~niv~l~g~~~~~~~~~~~lv~e~~~~GsL~ 551 (555)
+.||+....+|..+.+|.-..... ..+..|...++.+.. --+.+++.++...+. .++||||++|-++.
T Consensus 25 ~~v~r~~~~~~~~~vlK~~~~~~~---~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~--~~~v~~~i~G~~~~ 94 (255)
T d1nd4a_ 25 AAVFRLSAQGRPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTEAGR--DWLLLGEVPGQDLL 94 (255)
T ss_dssp CEEEEEECTTSCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSC--EEEEEECCSSEETT
T ss_pred CeEEEEEeCCCCEEEEEeCCccCH---hHHHHHHHHHHHHHhcCCCCCceeeecccccc--eEEEEEeeeccccc
Confidence 679999887787888897654432 235566666655432 334567777776666 89999999986654
|