List of proteins associated with COG cluster: COG0042   tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
Protein ID
Link to complete
analysis report

Lenth
Link to complete
analysis report

Similarity with COG COG0042
All predicted COG clusters
psy5880 328 hhsearch probability: 96.04    Identity: 19%
subject length: 323   Length of aligned reigon: 129
Coverage over query: 56-215   Coverage over subject: 93-228
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism]
COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
COG0274, DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism]
COG0214, SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism]
COG0107, HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]
COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
COG0352, ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
COG0036, Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
COG2022, ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
COG0434, SgcQ Predicted TIM-barrel enzyme [General function prediction only]
COG1830, FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
COG2876, AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG0646, MetH Methionine synthase I (cobalamin-dependent), methyltransferase domain [Amino acid transport and metabolism]
COG5016, Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
COG1954, GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
COG3684, LacD Tagatose-1,6-bisphosphate aldolase [Carbohydrate transport and metabolism]
COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily [Cell envelope biogenesis, outer membrane / General function prediction only]
COG0329, DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
COG0157, NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
COG0800, Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
COG0134, TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
COG0269, SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
COG2513, PrpB PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]
COG0284, PyrF Orotidine-5'-phosphate decarboxylase [Nucleotide transport and metabolism]
psy1056 590 hhsearch probability: 97.74    Identity: 20%
subject length: 323   Length of aligned reigon: 127
Coverage over query: 330-462   Coverage over subject: 80-231
COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism]
COG2524, Predicted transcriptional regulator, contains C-terminal CBS domains [Transcription]
COG3448, CBS-domain-containing membrane protein [Signal transduction mechanisms]
COG3620, Predicted transcriptional regulator with C-terminal CBS domains [Transcription]
COG0800, Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]
COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
COG0517, FOG: CBS domain [General function prediction only]
COG4109, Predicted transcriptional regulator containing CBS domains [Transcription]
COG0107, HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]
COG0516, GuaB IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]
COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
COG2239, MgtE Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]
COG2022, ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
COG0134, TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG1253, TlyC Hemolysins and related proteins containing CBS domains [General function prediction only]
COG0214, SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism]
COG0274, DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism]
COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
COG0036, Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
COG4535, CorC Putative Mg2+ and Co2+ transporter CorC [Inorganic ion transport and metabolism]
COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
COG0269, SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
COG0352, ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
COG1830, FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
COG4536, CorB Putative Mg2+ and Co2+ transporter CorB [Inorganic ion transport and metabolism]
psy11600 277 hhsearch probability: 90.42    Identity: 19%
subject length: 323   Length of aligned reigon: 130
Coverage over query: 8-139   Coverage over subject: 69-230
COG0036, Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
COG0269, SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
COG0135, TrpF Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism]
COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
COG0352, ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
COG0800, Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
COG0157, NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
COG0284, PyrF Orotidine-5'-phosphate decarboxylase [Nucleotide transport and metabolism]
COG1954, GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG3142, CutC Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism]
psy12805 1429 hhsearch probability: 96.83    Identity: 20%
subject length: 323   Length of aligned reigon: 109
Coverage over query: 504-627   Coverage over subject: 117-232
COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
COG0067, GltB Glutamate synthase domain 1 [Amino acid transport and metabolism]
COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]
COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism]
COG2218, FwdC Formylmethanofuran dehydrogenase subunit C [Energy production and conversion]
COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]
COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion]
COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only]
COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones]
COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]
COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion]
COG0070, GltB Glutamate synthase domain 3 [Amino acid transport and metabolism]
COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG0274, DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism]
COG0034, PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
psy9039 251 hhsearch probability: 97.28    Identity: 23%
subject length: 323   Length of aligned reigon: 71
Coverage over query: 175-245   Coverage over subject: 154-233
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
COG0352, ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
COG0269, SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
COG0800, Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
COG0036, Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
COG0134, TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG0135, TrpF Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism]
COG0214, SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG2022, ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
COG0107, HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]
COG4981, Enoyl reductase domain of yeast-type FAS1 [Lipid metabolism]
COG1411, Uncharacterized protein related to proFAR isomerase (HisA) [General function prediction only]
COG3142, CutC Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism]
COG0113, HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
COG0149, TpiA Triosephosphate isomerase [Carbohydrate transport and metabolism]
COG0434, SgcQ Predicted TIM-barrel enzyme [General function prediction only]
COG1830, FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
COG0646, MetH Methionine synthase I (cobalamin-dependent), methyltransferase domain [Amino acid transport and metabolism]
psy11601 82 hhsearch probability: 97.15    Identity: 20%
subject length: 323   Length of aligned reigon: 65
Coverage over query: 2-66   Coverage over subject: 170-237
COG0036, Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
COG0352, ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
COG0269, SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
COG0157, NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
COG0800, Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
COG0214, SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism]
COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
COG1830, FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG2022, ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG0134, TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
COG0135, TrpF Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism]
COG0434, SgcQ Predicted TIM-barrel enzyme [General function prediction only]
COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
COG0284, PyrF Orotidine-5'-phosphate decarboxylase [Nucleotide transport and metabolism]
COG0107, HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]
COG0149, TpiA Triosephosphate isomerase [Carbohydrate transport and metabolism]
COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG3142, CutC Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism]
psy7649 100 hhsearch probability: 95.22    Identity: 32%
subject length: 323   Length of aligned reigon: 34
Coverage over query: 1-34   Coverage over subject: 199-233
COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism]
COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG2022, ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
COG0107, HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]
COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
COG0214, SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism]
psy3862 671 hhsearch probability: 95.65    Identity: 23%
subject length: 323   Length of aligned reigon: 191
Coverage over query: 52-263   Coverage over subject: 6-239
COG0516, GuaB IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]
COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism]
COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
COG0269, SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
COG0800, Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
psy18231 540 hhsearch probability: 99.94    Identity: 27%
subject length: 323   Length of aligned reigon: 114
Coverage over query: 10-123   Coverage over subject: 5-120
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG2319, FOG: WD40 repeat [General function prediction only]
COG5170, CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
COG2706, 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
COG4946, Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
COG5354, Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
COG3391, Uncharacterized conserved protein [Function unknown]
COG0823, TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
COG3386, Gluconolactonase [Carbohydrate transport and metabolism]
COG3490, Uncharacterized protein conserved in bacteria [Function unknown]
COG3204, Uncharacterized protein conserved in bacteria [Function unknown]
COG5167, VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
COG5276, Uncharacterized conserved protein [Function unknown]
COG3823, Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
psy9711 198 hhsearch probability: 94.19    Identity: 13%
subject length: 323   Length of aligned reigon: 111
Coverage over query: 1-119   Coverage over subject: 112-228
COG0329, DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
COG2513, PrpB PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG4981, Enoyl reductase domain of yeast-type FAS1 [Lipid metabolism]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG2022, ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
COG1830, FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
psy2559 449 hhsearch probability: 93.98    Identity: 15%
subject length: 323   Length of aligned reigon: 127
Coverage over query: 192-319   Coverage over subject: 75-235
COG0148, Eno Enolase [Carbohydrate transport and metabolism]
COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily [Cell envelope biogenesis, outer membrane / General function prediction only]
COG1441, MenC O-succinylbenzoate synthase [Coenzyme metabolism]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG3799, Mal Methylaspartate ammonia-lyase [Amino acid transport and metabolism]
psy2397 452 hhsearch probability: 98.12    Identity: 14%
subject length: 323   Length of aligned reigon: 204
Coverage over query: 17-263   Coverage over subject: 7-236
COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
COG4981, Enoyl reductase domain of yeast-type FAS1 [Lipid metabolism]
COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism]
COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG0352, ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
COG2022, ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
COG0214, SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism]
COG0036, Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
COG0134, TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
COG0434, SgcQ Predicted TIM-barrel enzyme [General function prediction only]
COG0107, HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG0135, TrpF Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism]
COG0800, Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
COG0269, SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
COG0516, GuaB IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]
COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
COG2185, Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
COG5564, Predicted TIM-barrel enzyme, possibly a dioxygenase [General function prediction only]
psy2396 452 hhsearch probability: 98.12    Identity: 14%
subject length: 323   Length of aligned reigon: 204
Coverage over query: 17-263   Coverage over subject: 7-236
COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
COG4981, Enoyl reductase domain of yeast-type FAS1 [Lipid metabolism]
COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism]
COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG0352, ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
COG2022, ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
COG0214, SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism]
COG0036, Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
COG0134, TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
COG0434, SgcQ Predicted TIM-barrel enzyme [General function prediction only]
COG0107, HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG0135, TrpF Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism]
COG0800, Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
COG0269, SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
COG0516, GuaB IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]
COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
COG2185, Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
COG5564, Predicted TIM-barrel enzyme, possibly a dioxygenase [General function prediction only]
psy9514 611 hhsearch probability: 98.79    Identity: 20%
subject length: 323   Length of aligned reigon: 149
Coverage over query: 367-595   Coverage over subject: 65-218
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG0269, SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
COG0214, SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism]
COG0107, HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]
COG2022, ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism]
COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
COG5063, CTH1 CCCH-type Zn-finger protein [General function prediction only]
COG0134, TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
COG0434, SgcQ Predicted TIM-barrel enzyme [General function prediction only]
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
COG0352, ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
COG0036, Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
COG0274, DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism]
COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
COG0135, TrpF Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism]
COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily [Cell envelope biogenesis, outer membrane / General function prediction only]
COG0413, PanB Ketopantoate hydroxymethyltransferase [Coenzyme metabolism]
COG0800, Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
psy10999 447 hhsearch probability: 98.03    Identity: 21%
subject length: 323   Length of aligned reigon: 110
Coverage over query: 227-350   Coverage over subject: 118-233
COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism]
COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG0274, DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism]
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
COG2022, ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
COG0157, NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
COG0214, SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism]
COG0134, TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
COG4981, Enoyl reductase domain of yeast-type FAS1 [Lipid metabolism]
COG0352, ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
COG0269, SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
COG0107, HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]
COG2185, Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
psy16199 842 hhsearch probability: 99.92    Identity: 23%
subject length: 323   Length of aligned reigon: 168
Coverage over query: 564-759   Coverage over subject: 67-241
COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]
COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones]
COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion]
COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism]
COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
COG0214, SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism]
COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
COG0274, DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism]
COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism]
COG0107, HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]
COG0036, Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
COG2022, ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
COG2081, Predicted flavoproteins [General function prediction only]
COG0352, ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
COG0134, TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
COG0269, SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
COG0434, SgcQ Predicted TIM-barrel enzyme [General function prediction only]
COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]
COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion]
COG4529, Uncharacterized protein conserved in bacteria [Function unknown]
COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion]
COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
COG0329, DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
COG0800, Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]
COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only]
COG2513, PrpB PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]
psy10250 387 hhsearch probability: 96.54    Identity: 20%
subject length: 323   Length of aligned reigon: 129
Coverage over query: 214-353   Coverage over subject: 74-218
COG0274, DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG1830, FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
COG0502, BioB Biotin synthase and related enzymes [Coenzyme metabolism]
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
COG1891, Uncharacterized protein conserved in archaea [Function unknown]
COG0157, NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
COG5016, Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
psy7343 487 hhsearch probability: 99.47    Identity: 25%
subject length: 323   Length of aligned reigon: 152
Coverage over query: 136-313   Coverage over subject: 69-235
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
COG0214, SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism]
COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism]
COG0274, DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism]
COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
COG0107, HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
COG2022, ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
COG0352, ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
COG0434, SgcQ Predicted TIM-barrel enzyme [General function prediction only]
COG0135, TrpF Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism]
COG0269, SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
COG0036, Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
COG2513, PrpB PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]
COG0134, TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
COG1830, FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG1954, GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
COG0800, Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
COG1411, Uncharacterized protein related to proFAR isomerase (HisA) [General function prediction only]
COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily [Cell envelope biogenesis, outer membrane / General function prediction only]
COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
COG0329, DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
COG0191, Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
COG5016, Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
COG2876, AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
COG0157, NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
COG4981, Enoyl reductase domain of yeast-type FAS1 [Lipid metabolism]
psy16780 202 hhsearch probability: 99.63    Identity: 24%
subject length: 323   Length of aligned reigon: 146
Coverage over query: 46-192   Coverage over subject: 117-283
COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG0134, TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
COG0274, DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism]
COG2022, ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
COG0214, SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism]
COG0107, HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]
COG0269, SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
COG0036, Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
COG0329, DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
COG0157, NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
COG0800, Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
COG1830, FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
COG0434, SgcQ Predicted TIM-barrel enzyme [General function prediction only]
COG0176, MipB Transaldolase [Carbohydrate transport and metabolism]
COG3684, LacD Tagatose-1,6-bisphosphate aldolase [Carbohydrate transport and metabolism]
COG1954, GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
COG0352, ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
COG0135, TrpF Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism]
COG0284, PyrF Orotidine-5'-phosphate decarboxylase [Nucleotide transport and metabolism]
COG2876, AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
psy965 214 hhsearch probability: 90.79    Identity: 19%
subject length: 323   Length of aligned reigon: 93
Coverage over query: 107-206   Coverage over subject: 66-169
COG0274, DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism]
COG1830, FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
COG1891, Uncharacterized protein conserved in archaea [Function unknown]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
psy2378 956 hhsearch probability: 100.00    Identity: 32%
subject length: 323   Length of aligned reigon: 293
Coverage over query: 2-317   Coverage over subject: 3-301
COG0635, HemN Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG0108, RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
COG0054, RibH Riboflavin synthase beta-chain [Coenzyme metabolism]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG0621, MiaB 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]
COG1243, ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG1242, Predicted Fe-S oxidoreductase [General function prediction only]
COG0781, NusB Transcription termination factor [Transcription]
COG1032, Fe-S oxidoreductase [Energy production and conversion]
COG1031, Uncharacterized Fe-S oxidoreductase [Energy production and conversion]
COG0502, BioB Biotin synthase and related enzymes [Coenzyme metabolism]
COG1244, Predicted Fe-S oxidoreductase [General function prediction only]
COG1856, Uncharacterized homolog of biotin synthetase [Function unknown]
COG2100, Predicted Fe-S oxidoreductase [General function prediction only]
COG2896, MoaA Molybdenum cofactor biosynthesis enzyme [Coenzyme metabolism]
COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
COG0214, SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism]
COG1060, ThiH Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only]
COG0641, AslB Arylsulfatase regulator (Fe-S oxidoreductase) [General function prediction only]
COG2516, Biotin synthase-related enzyme [General function prediction only]
COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
COG0535, Predicted Fe-S oxidoreductases [General function prediction only]
COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism]
COG0107, HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]
COG4277, Predicted DNA-binding protein with the Helix-hairpin-helix motif [General function prediction only]
COG1625, Fe-S oxidoreductase, related to NifB/MoaA family [Energy production and conversion]
COG0731, Fe-S oxidoreductases [Energy production and conversion]
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
COG0320, LipA Lipoate synthase [Coenzyme metabolism]
COG1533, SplB DNA repair photolyase [DNA replication, recombination, and repair]
COG0036, Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
COG0434, SgcQ Predicted TIM-barrel enzyme [General function prediction only]
COG0269, SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
COG1509, KamA Lysine 2,3-aminomutase [Amino acid transport and metabolism]
COG1731, Archaeal riboflavin synthase [Coenzyme metabolism]
COG2022, ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
COG0274, DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism]
COG1180, PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones]
COG0820, Predicted Fe-S-cluster redox enzyme [General function prediction only]
COG2108, Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme [General function prediction only]
COG0352, ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily [Cell envelope biogenesis, outer membrane / General function prediction only]
COG0134, TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
COG2513, PrpB PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]
COG0800, Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
psy7344 240 hhsearch probability: 99.90    Identity: 25%
subject length: 323   Length of aligned reigon: 151
Coverage over query: 8-180   Coverage over subject: 86-247
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG0214, SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism]
COG0036, Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
COG2513, PrpB PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]
COG0329, DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
psy17868 208 hhsearch probability: 96.26    Identity: 24%
subject length: 323   Length of aligned reigon: 74
Coverage over query: 1-74   Coverage over subject: 226-317
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
psy9518 132 hhsearch probability: 99.67    Identity: 34%
subject length: 323   Length of aligned reigon: 91
Coverage over query: 1-99   Coverage over subject: 226-320
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
psy4403 101 hhsearch probability: 99.85    Identity: 18%
subject length: 323   Length of aligned reigon: 97
Coverage over query: 1-100   Coverage over subject: 201-310
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
COG0107, HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]
COG0134, TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
psy2386 311 hhsearch probability: 100.00    Identity: 31%
subject length: 323   Length of aligned reigon: 293
Coverage over query: 1-308   Coverage over subject: 19-318
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG0214, SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism]
COG0107, HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]
COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism]
COG0274, DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism]
COG0434, SgcQ Predicted TIM-barrel enzyme [General function prediction only]
COG0036, Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
COG0269, SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
COG2022, ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
COG0134, TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily [Cell envelope biogenesis, outer membrane / General function prediction only]
COG0352, ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
COG1830, FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
COG2513, PrpB PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]
COG0413, PanB Ketopantoate hydroxymethyltransferase [Coenzyme metabolism]
COG1411, Uncharacterized protein related to proFAR isomerase (HisA) [General function prediction only]
COG2876, AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
COG5016, Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
COG0800, Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
COG4981, Enoyl reductase domain of yeast-type FAS1 [Lipid metabolism]
COG0329, DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
COG0135, TrpF Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism]
psy4398 306 hhsearch probability: 100.00    Identity: 35%
subject length: 323   Length of aligned reigon: 226
Coverage over query: 22-263   Coverage over subject: 2-237
COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
COG0107, HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]
COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism]
COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
COG0274, DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism]
COG2022, ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
COG0434, SgcQ Predicted TIM-barrel enzyme [General function prediction only]
COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
COG0214, SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism]
COG0352, ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
COG0036, Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
COG1830, FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
COG0191, Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily [Cell envelope biogenesis, outer membrane / General function prediction only]
COG0329, DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
COG0135, TrpF Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism]
COG0134, TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
COG0413, PanB Ketopantoate hydroxymethyltransferase [Coenzyme metabolism]
COG0269, SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
COG4981, Enoyl reductase domain of yeast-type FAS1 [Lipid metabolism]
COG1411, Uncharacterized protein related to proFAR isomerase (HisA) [General function prediction only]
COG3142, CutC Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism]
COG0800, Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
COG3684, LacD Tagatose-1,6-bisphosphate aldolase [Carbohydrate transport and metabolism]
COG5016, Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
COG2876, AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
COG1954, GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
COG2513, PrpB PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]