| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG0055 |
All predicted COG clusters |
|---|---|---|---|
| psy13776 | 539 | hhsearch probability: 92.94 Identity: 30% subject length: 468 Length of aligned reigon: 69 Coverage over query: 423-499 Coverage over subject: 28-99 |
COG1156, NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] COG1158, Rho Transcription termination factor [Transcription] COG1155, NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] COG0056, AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG0055, AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] |
| psy3765 | 592 | hhsearch probability: 98.05 Identity: 18% subject length: 468 Length of aligned reigon: 87 Coverage over query: 484-571 Coverage over subject: 135-269 |
COG1156, NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] COG1158, Rho Transcription termination factor [Transcription] COG0056, AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG0055, AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG1155, NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] |
| psy210 | 915 | hhsearch probability: 100.00 Identity: 23% subject length: 468 Length of aligned reigon: 379 Coverage over query: 165-556 Coverage over subject: 53-448 |
COG1156, NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG1158, Rho Transcription termination factor [Transcription] COG0055, AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] COG0056, AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] COG1155, NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0636, AtpE F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K [Energy production and conversion] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] |
| psy5594 | 542 | hhsearch probability: 99.89 Identity: 18% subject length: 468 Length of aligned reigon: 136 Coverage over query: 3-152 Coverage over subject: 291-436 |
COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG0055, AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] COG1156, NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] COG0056, AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] COG1155, NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] COG1158, Rho Transcription termination factor [Transcription] |
| psy13480 | 615 | hhsearch probability: 100.00 Identity: 30% subject length: 468 Length of aligned reigon: 418 Coverage over query: 16-544 Coverage over subject: 2-438 |
COG1156, NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] COG1158, Rho Transcription termination factor [Transcription] COG0055, AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] COG0056, AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG1155, NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] |
| psy5598 | 128 | hhsearch probability: 99.48 Identity: 22% subject length: 468 Length of aligned reigon: 98 Coverage over query: 28-126 Coverage over subject: 3-104 |
COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG1156, NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] COG0056, AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] COG1155, NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] COG0055, AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] |
| psy2893 | 515 | hhsearch probability: 100.00 Identity: 25% subject length: 468 Length of aligned reigon: 422 Coverage over query: 27-463 Coverage over subject: 2-448 |
COG1156, NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] COG1158, Rho Transcription termination factor [Transcription] COG0055, AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] COG0056, AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG1155, NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG2087, CobU Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase [Coenzyme metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] |
| psy6464 | 96 | hhsearch probability: 99.97 Identity: 85% subject length: 468 Length of aligned reigon: 93 Coverage over query: 1-93 Coverage over subject: 214-306 |
COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG0056, AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] COG0055, AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] COG1156, NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] COG1155, NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] COG1158, Rho Transcription termination factor [Transcription] |
| psy271 | 191 | hhsearch probability: 99.00 Identity: 31% subject length: 468 Length of aligned reigon: 91 Coverage over query: 3-93 Coverage over subject: 47-139 |
COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG1156, NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] COG0055, AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] COG1155, NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] COG0056, AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] |
| psy2894 | 515 | hhsearch probability: 100.00 Identity: 25% subject length: 468 Length of aligned reigon: 422 Coverage over query: 27-463 Coverage over subject: 2-448 |
COG1156, NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] COG1158, Rho Transcription termination factor [Transcription] COG0055, AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] COG0056, AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG1155, NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG2087, CobU Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase [Coenzyme metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] |
| psy5595 | 293 | hhsearch probability: 100.00 Identity: 21% subject length: 468 Length of aligned reigon: 246 Coverage over query: 1-265 Coverage over subject: 90-350 |
COG1158, Rho Transcription termination factor [Transcription] COG0055, AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] COG0056, AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG1156, NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] COG1155, NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] |
| psy5596 | 154 | hhsearch probability: 99.92 Identity: 22% subject length: 468 Length of aligned reigon: 128 Coverage over query: 1-138 Coverage over subject: 309-447 |
COG1156, NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG0055, AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] COG1155, NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] COG0056, AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] COG1158, Rho Transcription termination factor [Transcription] |
| psy5597 | 204 | hhsearch probability: 99.97 Identity: 23% subject length: 468 Length of aligned reigon: 179 Coverage over query: 14-202 Coverage over subject: 7-196 |
COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG0055, AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] COG0056, AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] COG1155, NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] COG1156, NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] |
| psy2897 | 467 | hhsearch probability: 100.00 Identity: 72% subject length: 468 Length of aligned reigon: 460 Coverage over query: 1-467 Coverage over subject: 1-467 |
COG1156, NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] COG1158, Rho Transcription termination factor [Transcription] COG0055, AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] COG0056, AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG1155, NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] |
| psy2896 | 467 | hhsearch probability: 100.00 Identity: 72% subject length: 468 Length of aligned reigon: 460 Coverage over query: 1-467 Coverage over subject: 1-467 |
COG1156, NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] COG1158, Rho Transcription termination factor [Transcription] COG0055, AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] COG0056, AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG1155, NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] |
| psy6460 | 198 | hhsearch probability: 100.00 Identity: 75% subject length: 468 Length of aligned reigon: 192 Coverage over query: 5-197 Coverage over subject: 263-467 |
COG1156, NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] COG0055, AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG0056, AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] COG1155, NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] COG1158, Rho Transcription termination factor [Transcription] |
| psy17544 | 266 | hhsearch probability: 100.00 Identity: 69% subject length: 468 Length of aligned reigon: 208 Coverage over query: 52-265 Coverage over subject: 2-214 |
COG1156, NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] COG0055, AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] COG0056, AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] COG1155, NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG1158, Rho Transcription termination factor [Transcription] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] |