| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG0446 |
All predicted COG clusters |
|---|---|---|---|
| psy10285 | 673 | hhsearch probability: 96.76 Identity: 23% subject length: 415 Length of aligned reigon: 35 Coverage over query: 244-281 Coverage over subject: 136-170 |
COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG2081, Predicted flavoproteins [General function prediction only] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG3573, Predicted oxidoreductase [General function prediction only] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG3349, Uncharacterized conserved protein [Function unknown] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] |
| psy9064 | 272 | hhsearch probability: 92.06 Identity: 23% subject length: 415 Length of aligned reigon: 40 Coverage over query: 60-99 Coverage over subject: 136-175 |
COG0287, TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] COG1250, FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] COG1893, ApbA Ketopantoate reductase [Coenzyme metabolism] COG0345, ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism] COG0677, WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG1023, Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0362, Gnd 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism] COG0240, GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG2084, MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] COG4007, Predicted dehydrogenase related to H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase [General function prediction only] COG0039, Mdh Malate/lactate dehydrogenases [Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG4091, Predicted homoserine dehydrogenase [Amino acid transport and metabolism] COG2085, Predicted dinucleotide-binding enzymes [General function prediction only] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG3349, Uncharacterized conserved protein [Function unknown] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0169, AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG1748, LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] COG0059, IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1064, AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] |
| psy1704 | 90 | hhsearch probability: 93.18 Identity: 34% subject length: 415 Length of aligned reigon: 32 Coverage over query: 30-61 Coverage over subject: 1-32 |
COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG2081, Predicted flavoproteins [General function prediction only] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG3573, Predicted oxidoreductase [General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0771, MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] COG1748, LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] COG1893, ApbA Ketopantoate reductase [Coenzyme metabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1648, CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] COG1250, FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] |
| psy5251 | 197 | hhsearch probability: 96.64 Identity: 30% subject length: 415 Length of aligned reigon: 33 Coverage over query: 5-39 Coverage over subject: 137-169 |
COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG3573, Predicted oxidoreductase [General function prediction only] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] |
| psy9964 | 595 | hhsearch probability: 93.20 Identity: 27% subject length: 415 Length of aligned reigon: 56 Coverage over query: 510-579 Coverage over subject: 136-193 |
COG1782, Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair] COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only] COG1234, ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG1236, YSH1 Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis] COG2333, ComEC Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG1235, PhnP Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only] COG0426, FpaA Uncharacterized flavoproteins [Energy production and conversion] COG0491, GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3573, Predicted oxidoreductase [General function prediction only] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG2015, Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism] COG2081, Predicted flavoproteins [General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG2248, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] COG5212, PDE1 Low-affinity cAMP phosphodiesterase [Signal transduction mechanisms] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0579, Predicted dehydrogenase [General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] |
| psy4052 | 837 | hhsearch probability: 94.29 Identity: 24% subject length: 415 Length of aligned reigon: 106 Coverage over query: 97-238 Coverage over subject: 1-109 |
COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG5069, SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton] COG2081, Predicted flavoproteins [General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG3349, Uncharacterized conserved protein [Function unknown] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG3573, Predicted oxidoreductase [General function prediction only] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1063, Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] |
| psy9141 | 379 | hhsearch probability: 93.82 Identity: 17% subject length: 415 Length of aligned reigon: 106 Coverage over query: 9-159 Coverage over subject: 1-108 |
COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG2081, Predicted flavoproteins [General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG3349, Uncharacterized conserved protein [Function unknown] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3573, Predicted oxidoreductase [General function prediction only] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1748, LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] COG1063, Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG1893, ApbA Ketopantoate reductase [Coenzyme metabolism] |
| psy10545 | 1428 | hhsearch probability: 96.35 Identity: 22% subject length: 415 Length of aligned reigon: 50 Coverage over query: 937-986 Coverage over subject: 184-235 |
COG1562, ERG9 Phytoene/squalene synthetase [Lipid metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG2081, Predicted flavoproteins [General function prediction only] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG4716, Myosin-crossreactive antigen [Function unknown] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG3573, Predicted oxidoreductase [General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] |
| psy8270 | 737 | hhsearch probability: 93.16 Identity: 36% subject length: 415 Length of aligned reigon: 39 Coverage over query: 42-80 Coverage over subject: 136-174 |
COG0579, Predicted dehydrogenase [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG5126, FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG3573, Predicted oxidoreductase [General function prediction only] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG3349, Uncharacterized conserved protein [Function unknown] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG4716, Myosin-crossreactive antigen [Function unknown] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] |
| psy9395 | 637 | hhsearch probability: 93.02 Identity: 17% subject length: 415 Length of aligned reigon: 42 Coverage over query: 116-161 Coverage over subject: 66-108 |
COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG2081, Predicted flavoproteins [General function prediction only] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG3573, Predicted oxidoreductase [General function prediction only] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3349, Uncharacterized conserved protein [Function unknown] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] |
| psy15528 | 629 | hhsearch probability: 90.99 Identity: 22% subject length: 415 Length of aligned reigon: 103 Coverage over query: 66-208 Coverage over subject: 1-105 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG3573, Predicted oxidoreductase [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG3349, Uncharacterized conserved protein [Function unknown] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] |
| psy7665 | 296 | hhsearch probability: 96.84 Identity: 29% subject length: 415 Length of aligned reigon: 28 Coverage over query: 118-145 Coverage over subject: 1-30 |
COG2081, Predicted flavoproteins [General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0579, Predicted dehydrogenase [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3349, Uncharacterized conserved protein [Function unknown] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG3573, Predicted oxidoreductase [General function prediction only] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1893, ApbA Ketopantoate reductase [Coenzyme metabolism] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG1748, LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] COG0771, MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] |
| psy7710 | 473 | hhsearch probability: 94.95 Identity: 21% subject length: 415 Length of aligned reigon: 43 Coverage over query: 215-260 Coverage over subject: 64-106 |
COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG2081, Predicted flavoproteins [General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG3573, Predicted oxidoreductase [General function prediction only] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG3349, Uncharacterized conserved protein [Function unknown] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG4716, Myosin-crossreactive antigen [Function unknown] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] COG1648, CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG1748, LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] |
| psy16200 | 183 | hhsearch probability: 94.89 Identity: 13% subject length: 415 Length of aligned reigon: 92 Coverage over query: 72-182 Coverage over subject: 1-109 |
COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG2081, Predicted flavoproteins [General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0579, Predicted dehydrogenase [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3349, Uncharacterized conserved protein [Function unknown] COG1648, CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] COG1893, ApbA Ketopantoate reductase [Coenzyme metabolism] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] COG3573, Predicted oxidoreductase [General function prediction only] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0771, MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG0373, HemA Glutamyl-tRNA reductase [Coenzyme metabolism] COG1748, LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] |
| psy9583 | 866 | hhsearch probability: 97.47 Identity: 25% subject length: 415 Length of aligned reigon: 99 Coverage over query: 390-545 Coverage over subject: 136-238 |
COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG0508, AceF Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0511, AccB Biotin carboxyl carrier protein [Lipid metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG4845, Chloramphenicol O-acetyltransferase [Defense mechanisms] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG1038, PycA Pyruvate carboxylase [Energy production and conversion] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG2081, Predicted flavoproteins [General function prediction only] COG0579, Predicted dehydrogenase [General function prediction only] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3349, Uncharacterized conserved protein [Function unknown] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] |
| psy14496 | 561 | hhsearch probability: 97.87 Identity: 24% subject length: 415 Length of aligned reigon: 102 Coverage over query: 22-205 Coverage over subject: 136-238 |
COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG2440, FixX Ferredoxin-like protein [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG0579, Predicted dehydrogenase [General function prediction only] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1146, Ferredoxin [Energy production and conversion] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1245, Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG3573, Predicted oxidoreductase [General function prediction only] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG3349, Uncharacterized conserved protein [Function unknown] COG1145, NapF Ferredoxin [Energy production and conversion] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG2768, Uncharacterized Fe-S center protein [General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Energy production and conversion] COG3383, Uncharacterized anaerobic dehydrogenase [General function prediction only] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0437, HybA Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion] COG4231, Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG1144, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit [Energy production and conversion] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG1142, HycB Fe-S-cluster-containing hydrogenase components 2 [Energy production and conversion] COG1143, NuoI Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion] COG1600, Uncharacterized Fe-S protein [Energy production and conversion] COG2221, DsrA Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion] |
| psy14497 | 561 | hhsearch probability: 97.88 Identity: 24% subject length: 415 Length of aligned reigon: 102 Coverage over query: 22-205 Coverage over subject: 136-238 |
COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG2440, FixX Ferredoxin-like protein [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG0579, Predicted dehydrogenase [General function prediction only] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1146, Ferredoxin [Energy production and conversion] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG1245, Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG3573, Predicted oxidoreductase [General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG3349, Uncharacterized conserved protein [Function unknown] COG1145, NapF Ferredoxin [Energy production and conversion] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2768, Uncharacterized Fe-S center protein [General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG2221, DsrA Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion] COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Energy production and conversion] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG3383, Uncharacterized anaerobic dehydrogenase [General function prediction only] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0437, HybA Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion] COG4231, Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG1144, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit [Energy production and conversion] COG1143, NuoI Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion] COG1142, HycB Fe-S-cluster-containing hydrogenase components 2 [Energy production and conversion] COG1600, Uncharacterized Fe-S protein [Energy production and conversion] |
| psy14408 | 720 | hhsearch probability: 94.15 Identity: 21% subject length: 415 Length of aligned reigon: 63 Coverage over query: 638-707 Coverage over subject: 182-246 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG2081, Predicted flavoproteins [General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG3573, Predicted oxidoreductase [General function prediction only] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3349, Uncharacterized conserved protein [Function unknown] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG4716, Myosin-crossreactive antigen [Function unknown] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] |
| psy12712 | 905 | hhsearch probability: 90.34 Identity: 32% subject length: 415 Length of aligned reigon: 34 Coverage over query: 45-80 Coverage over subject: 136-169 |
COG0404, GcvT Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0354, Predicted aminomethyltransferase related to GcvT [General function prediction only] COG2081, Predicted flavoproteins [General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG3573, Predicted oxidoreductase [General function prediction only] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG3349, Uncharacterized conserved protein [Function unknown] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] |
| psy12832 | 359 | hhsearch probability: 95.93 Identity: 32% subject length: 415 Length of aligned reigon: 34 Coverage over query: 26-59 Coverage over subject: 136-169 |
COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG2081, Predicted flavoproteins [General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG3573, Predicted oxidoreductase [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0579, Predicted dehydrogenase [General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG3349, Uncharacterized conserved protein [Function unknown] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] |
| psy17311 | 310 | hhsearch probability: 95.22 Identity: 24% subject length: 415 Length of aligned reigon: 37 Coverage over query: 57-94 Coverage over subject: 137-173 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG3573, Predicted oxidoreductase [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG3349, Uncharacterized conserved protein [Function unknown] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG4716, Myosin-crossreactive antigen [Function unknown] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1748, LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] |
| psy7389 | 731 | hhsearch probability: 92.02 Identity: 32% subject length: 415 Length of aligned reigon: 34 Coverage over query: 117-151 Coverage over subject: 136-169 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG2081, Predicted flavoproteins [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG3573, Predicted oxidoreductase [General function prediction only] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG3349, Uncharacterized conserved protein [Function unknown] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] |
| psy760 | 511 | hhsearch probability: 95.96 Identity: 35% subject length: 415 Length of aligned reigon: 34 Coverage over query: 70-104 Coverage over subject: 137-170 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG0579, Predicted dehydrogenase [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG3573, Predicted oxidoreductase [General function prediction only] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG3349, Uncharacterized conserved protein [Function unknown] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] |
| psy1042 | 567 | hhsearch probability: 93.42 Identity: 31% subject length: 415 Length of aligned reigon: 35 Coverage over query: 118-153 Coverage over subject: 137-171 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG0579, Predicted dehydrogenase [General function prediction only] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG3573, Predicted oxidoreductase [General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG3349, Uncharacterized conserved protein [Function unknown] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] |
| psy10319 | 237 | hhsearch probability: 96.68 Identity: 20% subject length: 415 Length of aligned reigon: 96 Coverage over query: 105-206 Coverage over subject: 1-109 |
COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0771, MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG3573, Predicted oxidoreductase [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1893, ApbA Ketopantoate reductase [Coenzyme metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG2085, Predicted dinucleotide-binding enzymes [General function prediction only] COG1648, CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0373, HemA Glutamyl-tRNA reductase [Coenzyme metabolism] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] |
| psy754 | 610 | hhsearch probability: 93.17 Identity: 32% subject length: 415 Length of aligned reigon: 37 Coverage over query: 43-80 Coverage over subject: 136-172 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG2081, Predicted flavoproteins [General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG3573, Predicted oxidoreductase [General function prediction only] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG3349, Uncharacterized conserved protein [Function unknown] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] |
| psy14461 | 535 | hhsearch probability: 96.53 Identity: 12% subject length: 415 Length of aligned reigon: 95 Coverage over query: 88-221 Coverage over subject: 136-239 |
COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG2081, Predicted flavoproteins [General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0579, Predicted dehydrogenase [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0695, GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] |
| psy1040 | 614 | hhsearch probability: 91.63 Identity: 37% subject length: 415 Length of aligned reigon: 35 Coverage over query: 76-111 Coverage over subject: 137-171 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG2081, Predicted flavoproteins [General function prediction only] COG3573, Predicted oxidoreductase [General function prediction only] COG0579, Predicted dehydrogenase [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG3349, Uncharacterized conserved protein [Function unknown] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] |
| psy15089 | 661 | hhsearch probability: 97.01 Identity: 42% subject length: 415 Length of aligned reigon: 33 Coverage over query: 59-91 Coverage over subject: 137-169 |
COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG3573, Predicted oxidoreductase [General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] |
| psy7657 | 230 | hhsearch probability: 97.03 Identity: 35% subject length: 415 Length of aligned reigon: 40 Coverage over query: 55-95 Coverage over subject: 137-176 |
COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0579, Predicted dehydrogenase [General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG3573, Predicted oxidoreductase [General function prediction only] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG4716, Myosin-crossreactive antigen [Function unknown] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] |
| psy1059 | 512 | hhsearch probability: 94.32 Identity: 34% subject length: 415 Length of aligned reigon: 35 Coverage over query: 11-46 Coverage over subject: 137-171 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG2081, Predicted flavoproteins [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG3573, Predicted oxidoreductase [General function prediction only] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] |
| psy1058 | 512 | hhsearch probability: 94.32 Identity: 34% subject length: 415 Length of aligned reigon: 35 Coverage over query: 11-46 Coverage over subject: 137-171 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG2081, Predicted flavoproteins [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG3573, Predicted oxidoreductase [General function prediction only] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] |
| psy10417 | 385 | hhsearch probability: 94.93 Identity: 37% subject length: 415 Length of aligned reigon: 38 Coverage over query: 23-61 Coverage over subject: 136-173 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG0579, Predicted dehydrogenase [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3573, Predicted oxidoreductase [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG3349, Uncharacterized conserved protein [Function unknown] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] |
| psy2240 | 182 | hhsearch probability: 98.08 Identity: 39% subject length: 415 Length of aligned reigon: 72 Coverage over query: 23-161 Coverage over subject: 137-208 |
COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG2081, Predicted flavoproteins [General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG3573, Predicted oxidoreductase [General function prediction only] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG3349, Uncharacterized conserved protein [Function unknown] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG4716, Myosin-crossreactive antigen [Function unknown] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1748, LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] COG1250, FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] COG1893, ApbA Ketopantoate reductase [Coenzyme metabolism] COG1063, Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] |
| psy5264 | 323 | hhsearch probability: 94.46 Identity: 29% subject length: 415 Length of aligned reigon: 34 Coverage over query: 5-40 Coverage over subject: 137-170 |
COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG2081, Predicted flavoproteins [General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG3349, Uncharacterized conserved protein [Function unknown] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3573, Predicted oxidoreductase [General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1893, ApbA Ketopantoate reductase [Coenzyme metabolism] COG1748, LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] COG1250, FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] |
| psy2620 | 441 | hhsearch probability: 96.55 Identity: 28% subject length: 415 Length of aligned reigon: 40 Coverage over query: 5-44 Coverage over subject: 137-176 |
COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG0579, Predicted dehydrogenase [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG3349, Uncharacterized conserved protein [Function unknown] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG3573, Predicted oxidoreductase [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG4716, Myosin-crossreactive antigen [Function unknown] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] COG1748, LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] |
| psy4112 | 284 | hhsearch probability: 90.75 Identity: 27% subject length: 415 Length of aligned reigon: 37 Coverage over query: 54-91 Coverage over subject: 136-172 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG2081, Predicted flavoproteins [General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0579, Predicted dehydrogenase [General function prediction only] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG3573, Predicted oxidoreductase [General function prediction only] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG3349, Uncharacterized conserved protein [Function unknown] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] |
| psy10419 | 144 | hhsearch probability: 93.84 Identity: 39% subject length: 415 Length of aligned reigon: 36 Coverage over query: 62-98 Coverage over subject: 137-172 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG2081, Predicted flavoproteins [General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG3573, Predicted oxidoreductase [General function prediction only] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] |
| psy6708 | 197 | hhsearch probability: 95.01 Identity: 34% subject length: 415 Length of aligned reigon: 35 Coverage over query: 43-78 Coverage over subject: 137-171 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG2081, Predicted flavoproteins [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG3573, Predicted oxidoreductase [General function prediction only] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] |
| psy11618 | 1381 | hhsearch probability: 91.76 Identity: 25% subject length: 415 Length of aligned reigon: 60 Coverage over query: 375-438 Coverage over subject: 189-248 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG2081, Predicted flavoproteins [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG3573, Predicted oxidoreductase [General function prediction only] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] |
| psy893 | 523 | hhsearch probability: 92.39 Identity: 36% subject length: 415 Length of aligned reigon: 33 Coverage over query: 1-33 Coverage over subject: 143-175 |
COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG2081, Predicted flavoproteins [General function prediction only] COG0579, Predicted dehydrogenase [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG3573, Predicted oxidoreductase [General function prediction only] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG4716, Myosin-crossreactive antigen [Function unknown] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] |
| psy4105 | 107 | hhsearch probability: 93.05 Identity: 26% subject length: 415 Length of aligned reigon: 35 Coverage over query: 40-76 Coverage over subject: 137-171 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG2081, Predicted flavoproteins [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG3573, Predicted oxidoreductase [General function prediction only] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG3349, Uncharacterized conserved protein [Function unknown] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] |
| psy7388 | 224 | hhsearch probability: 93.50 Identity: 34% subject length: 415 Length of aligned reigon: 35 Coverage over query: 60-95 Coverage over subject: 137-171 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG2081, Predicted flavoproteins [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG3573, Predicted oxidoreductase [General function prediction only] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] |
| psy2463 | 177 | hhsearch probability: 95.40 Identity: 34% subject length: 415 Length of aligned reigon: 35 Coverage over query: 7-41 Coverage over subject: 137-172 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG2081, Predicted flavoproteins [General function prediction only] COG3573, Predicted oxidoreductase [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0579, Predicted dehydrogenase [General function prediction only] COG3349, Uncharacterized conserved protein [Function unknown] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1893, ApbA Ketopantoate reductase [Coenzyme metabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] |
| psy2398 | 433 | hhsearch probability: 98.30 Identity: 20% subject length: 415 Length of aligned reigon: 100 Coverage over query: 7-147 Coverage over subject: 136-238 |
COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0579, Predicted dehydrogenase [General function prediction only] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3349, Uncharacterized conserved protein [Function unknown] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG3573, Predicted oxidoreductase [General function prediction only] COG2081, Predicted flavoproteins [General function prediction only] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG2910, Putative NADH-flavin reductase [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] |
| psy14992 | 455 | hhsearch probability: 97.15 Identity: 36% subject length: 415 Length of aligned reigon: 42 Coverage over query: 11-53 Coverage over subject: 136-177 |
COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG2081, Predicted flavoproteins [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG3573, Predicted oxidoreductase [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG4716, Myosin-crossreactive antigen [Function unknown] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0771, MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] COG1748, LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG0281, SfcA Malic enzyme [Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1893, ApbA Ketopantoate reductase [Coenzyme metabolism] |
| psy3408 | 146 | hhsearch probability: 96.11 Identity: 29% subject length: 415 Length of aligned reigon: 38 Coverage over query: 29-67 Coverage over subject: 136-173 |
COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG3573, Predicted oxidoreductase [General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1893, ApbA Ketopantoate reductase [Coenzyme metabolism] |
| psy11924 | 617 | hhsearch probability: 95.42 Identity: 10% subject length: 415 Length of aligned reigon: 99 Coverage over query: 226-412 Coverage over subject: 137-235 |
COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG2081, Predicted flavoproteins [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG3349, Uncharacterized conserved protein [Function unknown] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG4716, Myosin-crossreactive antigen [Function unknown] COG3573, Predicted oxidoreductase [General function prediction only] |
| psy3756 | 451 | hhsearch probability: 98.62 Identity: 24% subject length: 415 Length of aligned reigon: 99 Coverage over query: 109-225 Coverage over subject: 136-236 |
COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1143, NuoI Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG1144, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit [Energy production and conversion] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0579, Predicted dehydrogenase [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG1146, Ferredoxin [Energy production and conversion] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Energy production and conversion] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1145, NapF Ferredoxin [Energy production and conversion] COG2768, Uncharacterized Fe-S center protein [General function prediction only] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG2221, DsrA Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion] COG3349, Uncharacterized conserved protein [Function unknown] COG0437, HybA Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG3573, Predicted oxidoreductase [General function prediction only] COG1245, Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1142, HycB Fe-S-cluster-containing hydrogenase components 2 [Energy production and conversion] COG2440, FixX Ferredoxin-like protein [Energy production and conversion] COG1140, NarY Nitrate reductase beta subunit [Energy production and conversion] COG4231, Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion] COG3383, Uncharacterized anaerobic dehydrogenase [General function prediction only] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] |
| psy6038 | 661 | hhsearch probability: 96.43 Identity: 39% subject length: 415 Length of aligned reigon: 41 Coverage over query: 139-179 Coverage over subject: 136-176 |
COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG2081, Predicted flavoproteins [General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG3573, Predicted oxidoreductase [General function prediction only] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG4716, Myosin-crossreactive antigen [Function unknown] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] COG0771, MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] |
| psy12490 | 88 | hhsearch probability: 97.92 Identity: 23% subject length: 415 Length of aligned reigon: 40 Coverage over query: 2-45 Coverage over subject: 137-176 |
COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG2081, Predicted flavoproteins [General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG3573, Predicted oxidoreductase [General function prediction only] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0771, MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] COG1748, LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] COG4716, Myosin-crossreactive antigen [Function unknown] COG0026, PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] COG1893, ApbA Ketopantoate reductase [Coenzyme metabolism] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG2085, Predicted dinucleotide-binding enzymes [General function prediction only] COG0240, GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] |
| psy810 | 227 | hhsearch probability: 93.73 Identity: 15% subject length: 415 Length of aligned reigon: 78 Coverage over query: 121-200 Coverage over subject: 1-108 |
COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG2081, Predicted flavoproteins [General function prediction only] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1893, ApbA Ketopantoate reductase [Coenzyme metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0771, MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] COG1648, CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] COG0373, HemA Glutamyl-tRNA reductase [Coenzyme metabolism] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0240, GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0190, FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] |
| psy3757 | 451 | hhsearch probability: 98.60 Identity: 24% subject length: 415 Length of aligned reigon: 99 Coverage over query: 109-225 Coverage over subject: 136-236 |
COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG1143, NuoI Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG1144, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit [Energy production and conversion] COG1146, Ferredoxin [Energy production and conversion] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Energy production and conversion] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1145, NapF Ferredoxin [Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG3349, Uncharacterized conserved protein [Function unknown] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0437, HybA Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion] COG2221, DsrA Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion] COG2768, Uncharacterized Fe-S center protein [General function prediction only] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG1245, Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG2081, Predicted flavoproteins [General function prediction only] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG3573, Predicted oxidoreductase [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1142, HycB Fe-S-cluster-containing hydrogenase components 2 [Energy production and conversion] COG2440, FixX Ferredoxin-like protein [Energy production and conversion] COG4231, Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion] COG3383, Uncharacterized anaerobic dehydrogenase [General function prediction only] COG1140, NarY Nitrate reductase beta subunit [Energy production and conversion] |
| psy7656 | 183 | hhsearch probability: 97.71 Identity: 32% subject length: 415 Length of aligned reigon: 41 Coverage over query: 14-55 Coverage over subject: 136-176 |
COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG2081, Predicted flavoproteins [General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG3573, Predicted oxidoreductase [General function prediction only] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG4716, Myosin-crossreactive antigen [Function unknown] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] COG0771, MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG1893, ApbA Ketopantoate reductase [Coenzyme metabolism] COG1748, LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0281, SfcA Malic enzyme [Energy production and conversion] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1063, Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1250, FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] |
| psy14927 | 1074 | hhsearch probability: 96.73 Identity: 23% subject length: 415 Length of aligned reigon: 91 Coverage over query: 795-898 Coverage over subject: 137-238 |
COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG3898, Uncharacterized membrane-bound protein [Function unknown] COG5290, IkappaB kinase complex, IKAP component [Transcription] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG3071, HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] COG3349, Uncharacterized conserved protein [Function unknown] COG2081, Predicted flavoproteins [General function prediction only] |
| psy9487 | 101 | hhsearch probability: 91.55 Identity: 25% subject length: 415 Length of aligned reigon: 59 Coverage over query: 18-92 Coverage over subject: 178-238 |
COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG2081, Predicted flavoproteins [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG3573, Predicted oxidoreductase [General function prediction only] |
| psy11001 | 81 | hhsearch probability: 97.29 Identity: 37% subject length: 415 Length of aligned reigon: 30 Coverage over query: 52-81 Coverage over subject: 136-165 |
COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG2081, Predicted flavoproteins [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3573, Predicted oxidoreductase [General function prediction only] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1893, ApbA Ketopantoate reductase [Coenzyme metabolism] COG0771, MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] COG1748, LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] COG0240, GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1250, FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1648, CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] COG1063, Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] |
| psy1545 | 454 | hhsearch probability: 97.96 Identity: 20% subject length: 415 Length of aligned reigon: 95 Coverage over query: 3-108 Coverage over subject: 137-238 |
COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG3573, Predicted oxidoreductase [General function prediction only] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] |
| psy12489 | 365 | hhsearch probability: 97.94 Identity: 20% subject length: 415 Length of aligned reigon: 96 Coverage over query: 2-168 Coverage over subject: 137-235 |
COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG2081, Predicted flavoproteins [General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG3573, Predicted oxidoreductase [General function prediction only] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG4716, Myosin-crossreactive antigen [Function unknown] COG1748, LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] COG0771, MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG1893, ApbA Ketopantoate reductase [Coenzyme metabolism] COG2085, Predicted dinucleotide-binding enzymes [General function prediction only] COG0287, TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] COG1250, FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] |
| psy811 | 218 | hhsearch probability: 98.01 Identity: 27% subject length: 415 Length of aligned reigon: 94 Coverage over query: 18-122 Coverage over subject: 136-238 |
COG2081, Predicted flavoproteins [General function prediction only] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG0771, MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG3573, Predicted oxidoreductase [General function prediction only] COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] |
| psy11537 | 1801 | hhsearch probability: 97.27 Identity: 14% subject length: 415 Length of aligned reigon: 58 Coverage over query: 1582-1639 Coverage over subject: 69-135 |
COG1241, MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] COG0667, Tas Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] COG5659, FOG: Transposase [DNA replication, recombination, and repair] COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] COG5141, PHD zinc finger-containing protein [General function prediction only] COG4278, Uncharacterized conserved protein [Function unknown] COG1032, Fe-S oxidoreductase [Energy production and conversion] COG0369, CysJ Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] COG2235, ArcA Arginine deiminase [Amino acid transport and metabolism] COG5099, RNA-binding protein of the Puf family, translational repressor [Translation, ribosomal structure and biogenesis] COG0582, XerC Integrase [DNA replication, recombination, and repair] COG1048, AcnA Aconitase A [Energy production and conversion] COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription] COG0312, TldD Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only] COG1932, SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism] COG5533, UBP5 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] COG1404, AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] COG4458, SrfC Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] COG0732, HsdS Restriction endonuclease S subunits [Defense mechanisms] COG0420, SbcD DNA repair exonuclease [DNA replication, recombination, and repair] COG0527, LysC Aspartokinases [Amino acid transport and metabolism] COG1549, Queuine tRNA-ribosyltransferases, contain PUA domain [Translation, ribosomal structure and biogenesis] COG2214, CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] COG5407, SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms] COG3072, CyaA Adenylate cyclase [Nucleotide transport and metabolism] COG1082, IolE Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism] COG1517, CRISPR system related protein [Defense mechanisms] COG4782, Uncharacterized protein conserved in bacteria [Function unknown] COG0145, HyuA N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism] COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] COG1322, Predicted nuclease of restriction endonuclease-like fold, RmuC family [General function prediction only] COG0252, AnsB L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D [Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis] COG0021, TktA Transketolase [Carbohydrate transport and metabolism] COG0270, Dcm Site-specific DNA methylase [DNA replication, recombination, and repair] COG1541, PaaK Coenzyme F390 synthetase [Coenzyme metabolism] COG1674, FtsK DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning] COG0061, nadF NAD kinase [Coenzyme metabolism] COG0624, ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] COG4924, Uncharacterized protein conserved in bacteria [Function unknown] COG4641, Uncharacterized protein conserved in bacteria [Function unknown] |
| psy7703 | 1356 | hhsearch probability: 98.33 Identity: 23% subject length: 415 Length of aligned reigon: 152 Coverage over query: 32-207 Coverage over subject: 1-175 |
COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG3349, Uncharacterized conserved protein [Function unknown] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG2081, Predicted flavoproteins [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0579, Predicted dehydrogenase [General function prediction only] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG4716, Myosin-crossreactive antigen [Function unknown] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG5044, MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG3573, Predicted oxidoreductase [General function prediction only] |
| psy12810 | 276 | hhsearch probability: 97.73 Identity: 24% subject length: 415 Length of aligned reigon: 86 Coverage over query: 116-215 Coverage over subject: 141-238 |
COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG3349, Uncharacterized conserved protein [Function unknown] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG3573, Predicted oxidoreductase [General function prediction only] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] |
| psy4525 | 388 | hhsearch probability: 97.82 Identity: 18% subject length: 415 Length of aligned reigon: 91 Coverage over query: 13-114 Coverage over subject: 136-238 |
COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG3349, Uncharacterized conserved protein [Function unknown] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG2081, Predicted flavoproteins [General function prediction only] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG3573, Predicted oxidoreductase [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] |
| psy16201 | 240 | hhsearch probability: 97.11 Identity: 17% subject length: 415 Length of aligned reigon: 59 Coverage over query: 145-204 Coverage over subject: 136-201 |
COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG2081, Predicted flavoproteins [General function prediction only] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1152, CdhA CO dehydrogenase/acetyl-CoA synthase alpha subunit [Energy production and conversion] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0771, MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG1150, HdrC Heterodisulfide reductase, subunit C [Energy production and conversion] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] COG1453, Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only] COG3573, Predicted oxidoreductase [General function prediction only] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1087, GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] COG0373, HemA Glutamyl-tRNA reductase [Coenzyme metabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1063, Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] COG2084, MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] |
| psy11185 | 312 | hhsearch probability: 98.34 Identity: 24% subject length: 415 Length of aligned reigon: 92 Coverage over query: 215-311 Coverage over subject: 65-164 |
COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0579, Predicted dehydrogenase [General function prediction only] COG3573, Predicted oxidoreductase [General function prediction only] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] |
| psy12350 | 1129 | hhsearch probability: 98.82 Identity: 16% subject length: 415 Length of aligned reigon: 269 Coverage over query: 742-1033 Coverage over subject: 1-310 |
COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG2081, Predicted flavoproteins [General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG3349, Uncharacterized conserved protein [Function unknown] COG3573, Predicted oxidoreductase [General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] |
| psy8791 | 706 | hhsearch probability: 98.98 Identity: 26% subject length: 415 Length of aligned reigon: 155 Coverage over query: 470-689 Coverage over subject: 1-161 |
COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG3349, Uncharacterized conserved protein [Function unknown] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] |
| psy16724 | 678 | hhsearch probability: 98.15 Identity: 17% subject length: 415 Length of aligned reigon: 35 Coverage over query: 206-242 Coverage over subject: 138-172 |
COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG2081, Predicted flavoproteins [General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG3349, Uncharacterized conserved protein [Function unknown] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] |
| psy12805 | 1429 | hhsearch probability: 98.87 Identity: 22% subject length: 415 Length of aligned reigon: 186 Coverage over query: 1209-1403 Coverage over subject: 95-310 |
COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism] COG0067, GltB Glutamate synthase domain 1 [Amino acid transport and metabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism] COG2218, FwdC Formylmethanofuran dehydrogenase subunit C [Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0070, GltB Glutamate synthase domain 3 [Amino acid transport and metabolism] COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only] COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] COG0274, DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism] COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG0034, PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] |
| psy2951 | 1466 | hhsearch probability: 99.94 Identity: 29% subject length: 415 Length of aligned reigon: 329 Coverage over query: 598-933 Coverage over subject: 1-337 |
COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG2146, {NirD} Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases [Inorganic ion transport and metabolism / General function prediction only] COG2081, Predicted flavoproteins [General function prediction only] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG4638, HcaE Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG0723, QcrA Rieske Fe-S protein [Energy production and conversion] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] |
| psy16199 | 842 | hhsearch probability: 99.58 Identity: 18% subject length: 415 Length of aligned reigon: 265 Coverage over query: 16-319 Coverage over subject: 14-308 |
COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1902, NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion] COG1304, idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism] COG0167, PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only] COG0159, TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism] COG0214, SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism] COG3010, NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism] COG0069, GltB Glutamate synthase domain 2 [Amino acid transport and metabolism] COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only] COG0274, DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG0107, HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism] COG0036, Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism] COG2022, ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism] COG2081, Predicted flavoproteins [General function prediction only] COG0352, ThiE Thiamine monophosphate synthase [Coenzyme metabolism] COG0134, TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism] COG0106, HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism] COG0269, SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism] COG0434, SgcQ Predicted TIM-barrel enzyme [General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0329, DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane] COG0800, Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG2513, PrpB PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism] |
| psy7674 | 164 | hhsearch probability: 98.32 Identity: 25% subject length: 415 Length of aligned reigon: 83 Coverage over query: 79-163 Coverage over subject: 64-155 |
COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0695, GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG0278, Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG2081, Predicted flavoproteins [General function prediction only] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] |
| psy2343 | 396 | hhsearch probability: 99.46 Identity: 17% subject length: 415 Length of aligned reigon: 221 Coverage over query: 60-342 Coverage over subject: 64-310 |
COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG2081, Predicted flavoproteins [General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG0579, Predicted dehydrogenase [General function prediction only] COG1648, CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG0373, HemA Glutamyl-tRNA reductase [Coenzyme metabolism] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0771, MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] |
| psy5231 | 148 | hhsearch probability: 99.46 Identity: 20% subject length: 415 Length of aligned reigon: 125 Coverage over query: 16-145 Coverage over subject: 137-308 |
COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG2081, Predicted flavoproteins [General function prediction only] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG1635, THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] COG3349, Uncharacterized conserved protein [Function unknown] COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0644, FixC Dehydrogenases (flavoproteins) [Energy production and conversion] COG0654, UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] COG0665, DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] COG1232, HemY Protoporphyrinogen oxidase [Coenzyme metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0562, Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] COG0578, GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG0579, Predicted dehydrogenase [General function prediction only] COG2072, TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] COG1231, Monoamine oxidase [Amino acid transport and metabolism] COG3075, GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] COG2907, Predicted NAD/FAD-binding protein [General function prediction only] COG1206, Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] COG1648, CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] COG1053, SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] COG4529, Uncharacterized protein conserved in bacteria [Function unknown] COG3486, IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] COG0445, GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] COG2303, BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] COG1893, ApbA Ketopantoate reductase [Coenzyme metabolism] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] COG0240, GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] COG1250, FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] COG1004, Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] |
| psy3825 | 332 | hhsearch probability: 98.96 Identity: 23% subject length: 415 Length of aligned reigon: 110 Coverage over query: 7-120 Coverage over subject: 216-337 |
COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG1148, HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] |
| psy5006 | 149 | hhsearch probability: 98.72 Identity: 26% subject length: 415 Length of aligned reigon: 100 Coverage over query: 8-108 Coverage over subject: 191-310 |
COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] |
| psy11186 | 212 | hhsearch probability: 98.86 Identity: 20% subject length: 415 Length of aligned reigon: 156 Coverage over query: 15-184 Coverage over subject: 252-413 |
COG1249, Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] COG1251, NirB NAD(P)H-nitrite reductase [Energy production and conversion] COG1252, Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] COG0446, HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] COG0492, TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] COG3634, AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] COG0493, GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only] COG0029, NadB Aspartate oxidase [Coenzyme metabolism] |