| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG0486 |
All predicted COG clusters |
|---|---|---|---|
| psy3301 | 608 | hhsearch probability: 98.63 Identity: 13% subject length: 454 Length of aligned reigon: 144 Coverage over query: 402-553 Coverage over subject: 210-378 |
COG5126, FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0536, Obg Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0486, ThdF Predicted GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] |
| psy3589 | 604 | hhsearch probability: 98.24 Identity: 21% subject length: 454 Length of aligned reigon: 92 Coverage over query: 186-312 Coverage over subject: 285-376 |
COG1161, Predicted GTPases [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG1137, YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG4148, ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4161, ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG4133, CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG4674, Uncharacterized ABC-type transport system, ATPase component [General function prediction only] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG4138, BtuD ABC-type cobalamin transport system, ATPase component [Coenzyme metabolism] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] COG1245, Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only] COG4778, PhnL ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG5265, ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones] COG1129, MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] COG2401, ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only] COG4170, SapD ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0178, UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair] COG3910, Predicted ATPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] |
| psy17754 | 361 | hhsearch probability: 96.21 Identity: 16% subject length: 454 Length of aligned reigon: 91 Coverage over query: 199-331 Coverage over subject: 216-309 |
COG2229, Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1160, Predicted GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG2262, HflX GTPases [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] |
| psy7236 | 672 | hhsearch probability: 99.17 Identity: 23% subject length: 454 Length of aligned reigon: 113 Coverage over query: 87-215 Coverage over subject: 265-377 |
COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1159, Era GTPase [General function prediction only] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1137, YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG4148, ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4161, ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG4133, CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] COG4674, Uncharacterized ABC-type transport system, ATPase component [General function prediction only] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1160, Predicted GTPases [General function prediction only] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4778, PhnL ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG4138, BtuD ABC-type cobalamin transport system, ATPase component [Coenzyme metabolism] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG5265, ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones] COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] COG1245, Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only] COG2401, ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only] COG1129, MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] |
| psy125 | 385 | hhsearch probability: 99.45 Identity: 16% subject length: 454 Length of aligned reigon: 118 Coverage over query: 222-340 Coverage over subject: 215-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2229, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1159, Era GTPase [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1137, YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] |
| psy15725 | 355 | hhsearch probability: 98.23 Identity: 22% subject length: 454 Length of aligned reigon: 111 Coverage over query: 225-345 Coverage over subject: 260-378 |
COG1159, Era GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0486, ThdF Predicted GTPase [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1161, Predicted GTPases [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] |
| psy5021 | 1021 | hhsearch probability: 99.48 Identity: 22% subject length: 454 Length of aligned reigon: 151 Coverage over query: 652-843 Coverage over subject: 218-376 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] |
| psy2924 | 225 | hhsearch probability: 99.59 Identity: 29% subject length: 454 Length of aligned reigon: 90 Coverage over query: 49-139 Coverage over subject: 217-309 |
COG1163, DRG Predicted GTPase [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG1137, YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1159, Era GTPase [General function prediction only] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG4148, ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG2262, HflX GTPases [General function prediction only] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4161, ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG4133, CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] COG4778, PhnL ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG4674, Uncharacterized ABC-type transport system, ATPase component [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0486, ThdF Predicted GTPase [General function prediction only] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG4138, BtuD ABC-type cobalamin transport system, ATPase component [Coenzyme metabolism] COG5265, ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones] COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] COG1129, MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG4170, SapD ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1245, Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only] COG2401, ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only] |
| psy11896 | 1043 | hhsearch probability: 99.41 Identity: 20% subject length: 454 Length of aligned reigon: 150 Coverage over query: 3-173 Coverage over subject: 218-376 |
COG5258, GTPBP1 GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1159, Era GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0486, ThdF Predicted GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2229, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] |
| psy14768 | 452 | hhsearch probability: 98.31 Identity: 19% subject length: 454 Length of aligned reigon: 77 Coverage over query: 109-185 Coverage over subject: 218-312 |
COG1160, Predicted GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0486, ThdF Predicted GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1159, Era GTPase [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] |
| psy2516 | 80 | hhsearch probability: 95.00 Identity: 36% subject length: 454 Length of aligned reigon: 25 Coverage over query: 4-28 Coverage over subject: 216-240 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1159, Era GTPase [General function prediction only] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG4161, ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy8851 | 2743 | hhsearch probability: 99.44 Identity: 15% subject length: 454 Length of aligned reigon: 113 Coverage over query: 499-636 Coverage over subject: 219-339 |
COG0094, RplE Ribosomal protein L5 [Translation, ribosomal structure and biogenesis] COG0088, RplD Ribosomal protein L4 [Translation, ribosomal structure and biogenesis] COG0093, RplN Ribosomal protein L14 [Translation, ribosomal structure and biogenesis] COG0090, RplB Ribosomal protein L2 [Translation, ribosomal structure and biogenesis] COG0092, RpsC Ribosomal protein S3 [Translation, ribosomal structure and biogenesis] COG0087, RplC Ribosomal protein L3 [Translation, ribosomal structure and biogenesis] COG0197, RplP Ribosomal protein L16/L10E [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0049, RpsG Ribosomal protein S7 [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG0091, RplV Ribosomal protein L22 [Translation, ribosomal structure and biogenesis] COG0198, RplX Ribosomal protein L24 [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0185, RpsS Ribosomal protein S19 [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0199, RpsN Ribosomal protein S14 [Translation, ribosomal structure and biogenesis] COG0051, RpsJ Ribosomal protein S10 [Translation, ribosomal structure and biogenesis] COG1160, Predicted GTPases [General function prediction only] COG0089, RplW Ribosomal protein L23 [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0048, RpsL Ribosomal protein S12 [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0486, ThdF Predicted GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] |
| psy15088 | 1291 | hhsearch probability: 97.86 Identity: 14% subject length: 454 Length of aligned reigon: 88 Coverage over query: 192-281 Coverage over subject: 243-338 |
COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1160, Predicted GTPases [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1159, Era GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] |
| psy15732 | 550 | hhsearch probability: 96.03 Identity: 21% subject length: 454 Length of aligned reigon: 56 Coverage over query: 480-544 Coverage over subject: 323-378 |
COG5432, RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] COG2229, Predicted GTPase [General function prediction only] COG5574, PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] COG5540, RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG5243, HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones] COG5152, Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only] COG5222, Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0486, ThdF Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG5194, APC11 Component of SCF ubiquitin ligase and anaphase-promoting complex [Posttranslational modification, protein turnover, chaperones / Cell division and chromosome partitioning] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5219, Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG5109, Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] COG5236, Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] |
| psy5059 | 1036 | hhsearch probability: 96.49 Identity: 35% subject length: 454 Length of aligned reigon: 23 Coverage over query: 9-31 Coverage over subject: 219-241 |
COG1160, Predicted GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1161, Predicted GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3596, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1162, Predicted GTPases [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0699, Predicted GTPases (dynamin-related) [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] |
| psy12099 | 174 | hhsearch probability: 97.15 Identity: 19% subject length: 454 Length of aligned reigon: 100 Coverage over query: 1-122 Coverage over subject: 269-376 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0536, Obg Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] |
| psy5805 | 75 | hhsearch probability: 94.99 Identity: 26% subject length: 454 Length of aligned reigon: 43 Coverage over query: 20-69 Coverage over subject: 296-339 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] |
| psy1758 | 1527 | hhsearch probability: 99.72 Identity: 25% subject length: 454 Length of aligned reigon: 168 Coverage over query: 51-230 Coverage over subject: 199-375 |
COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0858, RbfA Ribosome-binding factor A [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] |
| psy1416 | 177 | hhsearch probability: 96.05 Identity: 21% subject length: 454 Length of aligned reigon: 56 Coverage over query: 86-146 Coverage over subject: 323-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0536, Obg Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] |
| psy6669 | 132 | hhsearch probability: 92.89 Identity: 36% subject length: 454 Length of aligned reigon: 25 Coverage over query: 55-79 Coverage over subject: 216-240 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] |
| psy17235 | 170 | hhsearch probability: 98.17 Identity: 13% subject length: 454 Length of aligned reigon: 93 Coverage over query: 1-104 Coverage over subject: 267-367 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0218, Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] |
| psy9997 | 330 | hhsearch probability: 99.41 Identity: 23% subject length: 454 Length of aligned reigon: 160 Coverage over query: 63-318 Coverage over subject: 217-378 |
COG1160, Predicted GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] |
| psy15201 | 97 | hhsearch probability: 93.40 Identity: 29% subject length: 454 Length of aligned reigon: 45 Coverage over query: 14-72 Coverage over subject: 324-368 |
COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0536, Obg Predicted GTPase [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1160, Predicted GTPases [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2229, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] |
| psy13884 | 214 | hhsearch probability: 97.38 Identity: 10% subject length: 454 Length of aligned reigon: 146 Coverage over query: 43-200 Coverage over subject: 185-343 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0486, ThdF Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1160, Predicted GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] |
| psy14944 | 578 | hhsearch probability: 96.99 Identity: 18% subject length: 454 Length of aligned reigon: 106 Coverage over query: 18-138 Coverage over subject: 260-373 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1084, Predicted GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] |
| psy12559 | 610 | hhsearch probability: 98.54 Identity: 19% subject length: 454 Length of aligned reigon: 83 Coverage over query: 10-93 Coverage over subject: 249-339 |
COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] |
| psy10891 | 142 | hhsearch probability: 98.82 Identity: 15% subject length: 454 Length of aligned reigon: 100 Coverage over query: 1-114 Coverage over subject: 271-378 |
COG2229, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1163, DRG Predicted GTPase [General function prediction only] |
| psy16649 | 83 | hhsearch probability: 97.80 Identity: 13% subject length: 454 Length of aligned reigon: 78 Coverage over query: 1-83 Coverage over subject: 228-332 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG1161, Predicted GTPases [General function prediction only] COG1010, CobJ Precorrin-3B methylase [Coenzyme metabolism] |
| psy2646 | 168 | hhsearch probability: 99.02 Identity: 17% subject length: 454 Length of aligned reigon: 120 Coverage over query: 6-135 Coverage over subject: 251-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1159, Era GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1161, Predicted GTPases [General function prediction only] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] |
| psy14042 | 238 | hhsearch probability: 97.74 Identity: 14% subject length: 454 Length of aligned reigon: 104 Coverage over query: 4-120 Coverage over subject: 259-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG2229, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0486, ThdF Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] |
| psy6623 | 262 | hhsearch probability: 97.87 Identity: 20% subject length: 454 Length of aligned reigon: 112 Coverage over query: 88-237 Coverage over subject: 251-370 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0486, ThdF Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1084, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2262, HflX GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] |
| psy785 | 112 | hhsearch probability: 99.20 Identity: 19% subject length: 454 Length of aligned reigon: 98 Coverage over query: 2-110 Coverage over subject: 267-372 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0218, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0523, Putative GTPases (G3E family) [General function prediction only] |
| psy8220 | 161 | hhsearch probability: 97.92 Identity: 19% subject length: 454 Length of aligned reigon: 21 Coverage over query: 140-160 Coverage over subject: 215-235 |
COG1161, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG2229, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5258, GTPBP1 GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] |
| psy3651 | 334 | hhsearch probability: 97.92 Identity: 20% subject length: 454 Length of aligned reigon: 120 Coverage over query: 158-326 Coverage over subject: 251-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1159, Era GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1160, Predicted GTPases [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] |
| psy17510 | 113 | hhsearch probability: 99.07 Identity: 15% subject length: 454 Length of aligned reigon: 97 Coverage over query: 1-111 Coverage over subject: 271-375 |
COG2229, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG3596, Predicted GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] |
| psy4094 | 663 | hhsearch probability: 99.33 Identity: 20% subject length: 454 Length of aligned reigon: 152 Coverage over query: 458-629 Coverage over subject: 217-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1160, Predicted GTPases [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0486, ThdF Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1162, Predicted GTPases [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0802, Predicted ATPase or kinase [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy14891 | 359 | hhsearch probability: 98.63 Identity: 24% subject length: 454 Length of aligned reigon: 119 Coverage over query: 183-350 Coverage over subject: 251-377 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3596, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1160, Predicted GTPases [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4639, Predicted kinase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG4161, ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy10358 | 249 | hhsearch probability: 97.77 Identity: 16% subject length: 454 Length of aligned reigon: 91 Coverage over query: 10-167 Coverage over subject: 215-313 |
COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG2229, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1163, DRG Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy8869 | 593 | hhsearch probability: 99.55 Identity: 25% subject length: 454 Length of aligned reigon: 154 Coverage over query: 11-204 Coverage over subject: 216-377 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0250, NusG Transcription antiterminator [Transcription] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1161, Predicted GTPases [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1162, Predicted GTPases [General function prediction only] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] |
| psy2977 | 92 | hhsearch probability: 98.37 Identity: 22% subject length: 454 Length of aligned reigon: 55 Coverage over query: 27-89 Coverage over subject: 323-377 |
COG2262, HflX GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0523, Putative GTPases (G3E family) [General function prediction only] |
| psy2609 | 161 | hhsearch probability: 99.17 Identity: 18% subject length: 454 Length of aligned reigon: 99 Coverage over query: 2-108 Coverage over subject: 227-339 |
COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1159, Era GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG2229, Predicted GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1160, Predicted GTPases [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1162, Predicted GTPases [General function prediction only] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] COG1161, Predicted GTPases [General function prediction only] |
| psy15036 | 179 | hhsearch probability: 97.81 Identity: 10% subject length: 454 Length of aligned reigon: 107 Coverage over query: 43-163 Coverage over subject: 217-341 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] |
| psy5032 | 193 | hhsearch probability: 95.04 Identity: 27% subject length: 454 Length of aligned reigon: 26 Coverage over query: 13-39 Coverage over subject: 215-240 |
COG1159, Era GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1162, Predicted GTPases [General function prediction only] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1161, Predicted GTPases [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG4240, Predicted kinase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] |
| psy1086 | 654 | hhsearch probability: 99.57 Identity: 23% subject length: 454 Length of aligned reigon: 163 Coverage over query: 173-375 Coverage over subject: 214-378 |
COG0536, Obg Predicted GTPase [General function prediction only] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG2229, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1129, MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] |
| psy13686 | 109 | hhsearch probability: 92.66 Identity: 10% subject length: 454 Length of aligned reigon: 52 Coverage over query: 6-63 Coverage over subject: 327-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1162, Predicted GTPases [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0536, Obg Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1160, Predicted GTPases [General function prediction only] |
| psy15004 | 167 | hhsearch probability: 98.31 Identity: 19% subject length: 454 Length of aligned reigon: 90 Coverage over query: 3-103 Coverage over subject: 289-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0486, ThdF Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG5258, GTPBP1 GTPase [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG3596, Predicted GTPase [General function prediction only] |
| psy9154 | 115 | hhsearch probability: 99.18 Identity: 23% subject length: 454 Length of aligned reigon: 83 Coverage over query: 12-96 Coverage over subject: 217-309 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG0802, Predicted ATPase or kinase [General function prediction only] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] |
| psy2599 | 78 | hhsearch probability: 98.45 Identity: 13% subject length: 454 Length of aligned reigon: 61 Coverage over query: 1-64 Coverage over subject: 218-280 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0218, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] |
| psy15217 | 396 | hhsearch probability: 99.64 Identity: 25% subject length: 454 Length of aligned reigon: 155 Coverage over query: 10-204 Coverage over subject: 215-377 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1161, Predicted GTPases [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] |
| psy9895 | 784 | hhsearch probability: 99.22 Identity: 24% subject length: 454 Length of aligned reigon: 140 Coverage over query: 1-167 Coverage over subject: 230-378 |
COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] |
| psy8318 | 313 | hhsearch probability: 99.13 Identity: 18% subject length: 454 Length of aligned reigon: 120 Coverage over query: 157-300 Coverage over subject: 251-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1163, DRG Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4639, Predicted kinase [General function prediction only] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy6566 | 126 | hhsearch probability: 99.19 Identity: 17% subject length: 454 Length of aligned reigon: 106 Coverage over query: 7-126 Coverage over subject: 249-362 |
COG2229, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0486, ThdF Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] |
| psy12794 | 106 | hhsearch probability: 98.85 Identity: 20% subject length: 454 Length of aligned reigon: 84 Coverage over query: 6-103 Coverage over subject: 293-376 |
COG2229, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1161, Predicted GTPases [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] |
| psy2161 | 155 | hhsearch probability: 99.33 Identity: 15% subject length: 454 Length of aligned reigon: 116 Coverage over query: 12-153 Coverage over subject: 251-374 |
COG2229, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0486, ThdF Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5258, GTPBP1 GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] |
| psy18160 | 373 | hhsearch probability: 99.33 Identity: 17% subject length: 454 Length of aligned reigon: 148 Coverage over query: 46-227 Coverage over subject: 216-378 |
COG2229, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1084, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] |
| psy1526 | 295 | hhsearch probability: 96.68 Identity: 15% subject length: 454 Length of aligned reigon: 176 Coverage over query: 68-278 Coverage over subject: 177-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0536, Obg Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1162, Predicted GTPases [General function prediction only] |
| psy1417 | 188 | hhsearch probability: 99.31 Identity: 20% subject length: 454 Length of aligned reigon: 108 Coverage over query: 43-157 Coverage over subject: 219-337 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG2262, HflX GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] |
| psy17493 | 101 | hhsearch probability: 96.11 Identity: 11% subject length: 454 Length of aligned reigon: 55 Coverage over query: 6-65 Coverage over subject: 324-378 |
COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1162, Predicted GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1160, Predicted GTPases [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] |
| psy10117 | 135 | hhsearch probability: 99.58 Identity: 21% subject length: 454 Length of aligned reigon: 107 Coverage over query: 3-122 Coverage over subject: 218-336 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] |
| psy8044 | 234 | hhsearch probability: 98.31 Identity: 13% subject length: 454 Length of aligned reigon: 83 Coverage over query: 132-223 Coverage over subject: 217-309 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0802, Predicted ATPase or kinase [General function prediction only] |
| psy9521 | 125 | hhsearch probability: 98.65 Identity: 21% subject length: 454 Length of aligned reigon: 67 Coverage over query: 15-85 Coverage over subject: 215-281 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0218, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] |
| psy5780 | 106 | hhsearch probability: 97.30 Identity: 18% subject length: 454 Length of aligned reigon: 57 Coverage over query: 9-72 Coverage over subject: 322-378 |
COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1159, Era GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] |
| psy14947 | 204 | hhsearch probability: 98.54 Identity: 20% subject length: 454 Length of aligned reigon: 85 Coverage over query: 65-167 Coverage over subject: 294-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1162, Predicted GTPases [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5258, GTPBP1 GTPase [General function prediction only] |
| psy13093 | 111 | hhsearch probability: 98.78 Identity: 18% subject length: 454 Length of aligned reigon: 108 Coverage over query: 1-110 Coverage over subject: 227-364 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1160, Predicted GTPases [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG3596, Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0536, Obg Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1162, Predicted GTPases [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] |
| psy10355 | 156 | hhsearch probability: 99.51 Identity: 18% subject length: 454 Length of aligned reigon: 114 Coverage over query: 13-152 Coverage over subject: 248-369 |
COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1161, Predicted GTPases [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] |
| psy13961 | 459 | hhsearch probability: 99.63 Identity: 21% subject length: 454 Length of aligned reigon: 141 Coverage over query: 6-201 Coverage over subject: 216-364 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1161, Predicted GTPases [General function prediction only] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy8553 | 197 | hhsearch probability: 98.22 Identity: 14% subject length: 454 Length of aligned reigon: 100 Coverage over query: 15-122 Coverage over subject: 216-339 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] |
| psy2518 | 208 | hhsearch probability: 99.27 Identity: 15% subject length: 454 Length of aligned reigon: 156 Coverage over query: 22-188 Coverage over subject: 212-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5258, GTPBP1 GTPase [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] |
| psy16726 | 162 | hhsearch probability: 99.02 Identity: 12% subject length: 454 Length of aligned reigon: 113 Coverage over query: 1-158 Coverage over subject: 223-339 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1162, Predicted GTPases [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] |
| psy5771 | 108 | hhsearch probability: 99.24 Identity: 21% subject length: 454 Length of aligned reigon: 85 Coverage over query: 19-105 Coverage over subject: 215-308 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0536, Obg Predicted GTPase [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0802, Predicted ATPase or kinase [General function prediction only] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy9621 | 253 | hhsearch probability: 99.72 Identity: 15% subject length: 454 Length of aligned reigon: 156 Coverage over query: 7-224 Coverage over subject: 215-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1162, Predicted GTPases [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1161, Predicted GTPases [General function prediction only] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy2792 | 173 | hhsearch probability: 98.76 Identity: 15% subject length: 454 Length of aligned reigon: 97 Coverage over query: 2-110 Coverage over subject: 272-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1160, Predicted GTPases [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0536, Obg Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG5258, GTPBP1 GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] |
| psy15714 | 205 | hhsearch probability: 99.78 Identity: 27% subject length: 454 Length of aligned reigon: 154 Coverage over query: 21-199 Coverage over subject: 215-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1162, Predicted GTPases [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1161, Predicted GTPases [General function prediction only] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] |
| psy38 | 193 | hhsearch probability: 99.06 Identity: 20% subject length: 454 Length of aligned reigon: 132 Coverage over query: 3-152 Coverage over subject: 232-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5258, GTPBP1 GTPase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] |
| psy13826 | 173 | hhsearch probability: 99.10 Identity: 28% subject length: 454 Length of aligned reigon: 88 Coverage over query: 81-171 Coverage over subject: 212-309 |
COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1162, Predicted GTPases [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] |
| psy3124 | 463 | hhsearch probability: 99.62 Identity: 21% subject length: 454 Length of aligned reigon: 155 Coverage over query: 43-236 Coverage over subject: 215-377 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1161, Predicted GTPases [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG4148, ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] |
| psy8274 | 228 | hhsearch probability: 99.35 Identity: 23% subject length: 454 Length of aligned reigon: 150 Coverage over query: 1-215 Coverage over subject: 227-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] |
| psy11510 | 171 | hhsearch probability: 99.63 Identity: 16% subject length: 454 Length of aligned reigon: 129 Coverage over query: 35-169 Coverage over subject: 214-375 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0218, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1161, Predicted GTPases [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1162, Predicted GTPases [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] |
| psy11289 | 159 | hhsearch probability: 99.34 Identity: 23% subject length: 454 Length of aligned reigon: 131 Coverage over query: 3-146 Coverage over subject: 240-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0486, ThdF Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1084, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1161, Predicted GTPases [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] |
| psy4665 | 673 | hhsearch probability: 99.73 Identity: 26% subject length: 454 Length of aligned reigon: 156 Coverage over query: 112-280 Coverage over subject: 214-378 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1160, Predicted GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1161, Predicted GTPases [General function prediction only] |
| psy5781 | 231 | hhsearch probability: 99.13 Identity: 20% subject length: 454 Length of aligned reigon: 116 Coverage over query: 19-140 Coverage over subject: 215-341 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG2262, HflX GTPases [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0536, Obg Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG0802, Predicted ATPase or kinase [General function prediction only] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] |
| psy1169 | 218 | hhsearch probability: 99.74 Identity: 22% subject length: 454 Length of aligned reigon: 156 Coverage over query: 12-179 Coverage over subject: 214-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1162, Predicted GTPases [General function prediction only] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0802, Predicted ATPase or kinase [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] |
| psy18208 | 521 | hhsearch probability: 97.75 Identity: 16% subject length: 454 Length of aligned reigon: 31 Coverage over query: 377-407 Coverage over subject: 248-281 |
COG1161, Predicted GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1159, Era GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1084, Predicted GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] |
| psy2300 | 221 | hhsearch probability: 99.80 Identity: 19% subject length: 454 Length of aligned reigon: 155 Coverage over query: 20-185 Coverage over subject: 216-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0802, Predicted ATPase or kinase [General function prediction only] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy11649 | 890 | hhsearch probability: 99.34 Identity: 17% subject length: 454 Length of aligned reigon: 155 Coverage over query: 33-237 Coverage over subject: 215-376 |
COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] |
| psy10443 | 195 | hhsearch probability: 99.83 Identity: 24% subject length: 454 Length of aligned reigon: 153 Coverage over query: 5-182 Coverage over subject: 216-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG3596, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1161, Predicted GTPases [General function prediction only] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy14166 | 264 | hhsearch probability: 97.05 Identity: 26% subject length: 454 Length of aligned reigon: 58 Coverage over query: 109-167 Coverage over subject: 216-275 |
COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG4639, Predicted kinase [General function prediction only] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG3911, Predicted ATPase [General function prediction only] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG1159, Era GTPase [General function prediction only] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG0218, Predicted GTPase [General function prediction only] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy5747 | 309 | hhsearch probability: 99.69 Identity: 19% subject length: 454 Length of aligned reigon: 162 Coverage over query: 89-272 Coverage over subject: 215-378 |
COG2262, HflX GTPases [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1163, DRG Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1162, Predicted GTPases [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1161, Predicted GTPases [General function prediction only] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy9524 | 81 | hhsearch probability: 99.28 Identity: 23% subject length: 454 Length of aligned reigon: 79 Coverage over query: 1-80 Coverage over subject: 223-308 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1162, Predicted GTPases [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG2262, HflX GTPases [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4778, PhnL ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG0802, Predicted ATPase or kinase [General function prediction only] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG4133, CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] |
| psy17231 | 189 | hhsearch probability: 99.75 Identity: 19% subject length: 454 Length of aligned reigon: 144 Coverage over query: 7-158 Coverage over subject: 216-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] |
| psy15224 | 502 | hhsearch probability: 97.52 Identity: 28% subject length: 454 Length of aligned reigon: 85 Coverage over query: 4-113 Coverage over subject: 293-377 |
COG0250, NusG Transcription antiterminator [Transcription] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0198, RplX Ribosomal protein L24 [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG3596, Predicted GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1084, Predicted GTPase [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] |
| psy2967 | 101 | hhsearch probability: 98.60 Identity: 15% subject length: 454 Length of aligned reigon: 71 Coverage over query: 14-84 Coverage over subject: 213-309 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1162, Predicted GTPases [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG0802, Predicted ATPase or kinase [General function prediction only] |
| psy6554 | 1435 | hhsearch probability: 99.54 Identity: 23% subject length: 454 Length of aligned reigon: 160 Coverage over query: 9-247 Coverage over subject: 216-375 |
COG1159, Era GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5104, PRP40 Splicing factor [RNA processing and modification] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] |
| psy17467 | 730 | hhsearch probability: 99.45 Identity: 20% subject length: 454 Length of aligned reigon: 151 Coverage over query: 7-250 Coverage over subject: 217-376 |
COG1163, DRG Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2229, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG3596, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5258, GTPBP1 GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1162, Predicted GTPases [General function prediction only] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] |
| psy1873 | 157 | hhsearch probability: 99.70 Identity: 24% subject length: 454 Length of aligned reigon: 131 Coverage over query: 1-157 Coverage over subject: 223-363 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1162, Predicted GTPases [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy2159 | 194 | hhsearch probability: 99.83 Identity: 19% subject length: 454 Length of aligned reigon: 151 Coverage over query: 17-193 Coverage over subject: 213-375 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] |
| psy12173 | 224 | hhsearch probability: 99.77 Identity: 19% subject length: 454 Length of aligned reigon: 154 Coverage over query: 51-221 Coverage over subject: 216-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1161, Predicted GTPases [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] |
| psy2970 | 329 | hhsearch probability: 99.53 Identity: 13% subject length: 454 Length of aligned reigon: 149 Coverage over query: 17-212 Coverage over subject: 214-373 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1162, Predicted GTPases [General function prediction only] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] |
| psy5810 | 250 | hhsearch probability: 99.60 Identity: 15% subject length: 454 Length of aligned reigon: 150 Coverage over query: 50-212 Coverage over subject: 216-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1162, Predicted GTPases [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG4639, Predicted kinase [General function prediction only] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG4962, CpaF Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] |
| psy3450 | 432 | hhsearch probability: 99.61 Identity: 18% subject length: 454 Length of aligned reigon: 156 Coverage over query: 58-238 Coverage over subject: 215-378 |
COG1159, Era GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1162, Predicted GTPases [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1161, Predicted GTPases [General function prediction only] |
| psy4433 | 211 | hhsearch probability: 99.82 Identity: 16% subject length: 454 Length of aligned reigon: 148 Coverage over query: 9-210 Coverage over subject: 215-373 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1163, DRG Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1161, Predicted GTPases [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy1914 | 211 | hhsearch probability: 99.83 Identity: 16% subject length: 454 Length of aligned reigon: 148 Coverage over query: 9-210 Coverage over subject: 215-373 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1163, DRG Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1161, Predicted GTPases [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy8722 | 223 | hhsearch probability: 99.78 Identity: 19% subject length: 454 Length of aligned reigon: 155 Coverage over query: 13-179 Coverage over subject: 215-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0536, Obg Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1162, Predicted GTPases [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0802, Predicted ATPase or kinase [General function prediction only] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] |
| psy8700 | 200 | hhsearch probability: 99.82 Identity: 25% subject length: 454 Length of aligned reigon: 153 Coverage over query: 6-175 Coverage over subject: 216-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0802, Predicted ATPase or kinase [General function prediction only] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] |
| psy16810 | 755 | hhsearch probability: 99.14 Identity: 21% subject length: 454 Length of aligned reigon: 113 Coverage over query: 9-157 Coverage over subject: 218-338 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1162, Predicted GTPases [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] |
| psy10504 | 286 | hhsearch probability: 99.80 Identity: 22% subject length: 454 Length of aligned reigon: 154 Coverage over query: 102-269 Coverage over subject: 215-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2262, HflX GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1161, Predicted GTPases [General function prediction only] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy871 | 249 | hhsearch probability: 99.81 Identity: 19% subject length: 454 Length of aligned reigon: 160 Coverage over query: 18-248 Coverage over subject: 214-375 |
COG1159, Era GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1160, Predicted GTPases [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG3596, Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5258, GTPBP1 GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy2600 | 158 | hhsearch probability: 98.84 Identity: 15% subject length: 454 Length of aligned reigon: 79 Coverage over query: 32-122 Coverage over subject: 300-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG3596, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] |
| psy12927 | 75 | hhsearch probability: 98.99 Identity: 17% subject length: 454 Length of aligned reigon: 59 Coverage over query: 7-68 Coverage over subject: 217-277 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG3596, Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1159, Era GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy1315 | 202 | hhsearch probability: 99.86 Identity: 24% subject length: 454 Length of aligned reigon: 157 Coverage over query: 16-188 Coverage over subject: 214-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5258, GTPBP1 GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1162, Predicted GTPases [General function prediction only] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG4962, CpaF Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] |
| psy3029 | 617 | hhsearch probability: 99.62 Identity: 20% subject length: 454 Length of aligned reigon: 155 Coverage over query: 83-270 Coverage over subject: 216-378 |
COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG5180, PBP1 Protein interacting with poly(A)-binding protein [RNA processing and modification] COG2229, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG3596, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] |
| psy7275 | 150 | hhsearch probability: 97.49 Identity: 17% subject length: 454 Length of aligned reigon: 58 Coverage over query: 2-89 Coverage over subject: 321-378 |
COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] |
| psy784 | 128 | hhsearch probability: 99.78 Identity: 22% subject length: 454 Length of aligned reigon: 114 Coverage over query: 3-124 Coverage over subject: 217-340 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1163, DRG Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] |
| psy15625 | 223 | hhsearch probability: 99.82 Identity: 23% subject length: 454 Length of aligned reigon: 159 Coverage over query: 10-222 Coverage over subject: 216-374 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1162, Predicted GTPases [General function prediction only] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] |
| psy4710 | 192 | hhsearch probability: 99.87 Identity: 23% subject length: 454 Length of aligned reigon: 155 Coverage over query: 4-181 Coverage over subject: 216-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] |
| psy14754 | 192 | hhsearch probability: 99.87 Identity: 23% subject length: 454 Length of aligned reigon: 155 Coverage over query: 4-181 Coverage over subject: 216-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] |
| psy11135 | 191 | hhsearch probability: 99.86 Identity: 24% subject length: 454 Length of aligned reigon: 152 Coverage over query: 3-166 Coverage over subject: 217-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1162, Predicted GTPases [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1161, Predicted GTPases [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] |
| psy9646 | 211 | hhsearch probability: 98.39 Identity: 16% subject length: 454 Length of aligned reigon: 109 Coverage over query: 101-211 Coverage over subject: 217-334 |
COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1159, Era GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5258, GTPBP1 GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG2262, HflX GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] |
| psy10878 | 131 | hhsearch probability: 98.94 Identity: 23% subject length: 454 Length of aligned reigon: 61 Coverage over query: 67-130 Coverage over subject: 214-275 |
COG1161, Predicted GTPases [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] |
| psy16673 | 373 | hhsearch probability: 99.56 Identity: 30% subject length: 454 Length of aligned reigon: 114 Coverage over query: 8-215 Coverage over subject: 215-338 |
COG0486, ThdF Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG3596, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5258, GTPBP1 GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] |
| psy11835 | 601 | hhsearch probability: 99.65 Identity: 24% subject length: 454 Length of aligned reigon: 117 Coverage over query: 76-210 Coverage over subject: 216-340 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0486, ThdF Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1161, Predicted GTPases [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1192, Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] COG1162, Predicted GTPases [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] |
| psy2514 | 71 | hhsearch probability: 98.85 Identity: 23% subject length: 454 Length of aligned reigon: 57 Coverage over query: 11-69 Coverage over subject: 216-274 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1161, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2229, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] |
| psy12244 | 257 | hhsearch probability: 99.63 Identity: 18% subject length: 454 Length of aligned reigon: 124 Coverage over query: 28-176 Coverage over subject: 217-373 |
COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2229, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1161, Predicted GTPases [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] |
| psy10735 | 147 | hhsearch probability: 98.78 Identity: 28% subject length: 454 Length of aligned reigon: 53 Coverage over query: 21-73 Coverage over subject: 217-270 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG3596, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG2229, Predicted GTPase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1129, MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] |
| psy6316 | 259 | hhsearch probability: 99.82 Identity: 22% subject length: 454 Length of aligned reigon: 148 Coverage over query: 25-205 Coverage over subject: 218-373 |
COG1159, Era GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1161, Predicted GTPases [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] |
| psy12922 | 184 | hhsearch probability: 99.89 Identity: 18% subject length: 454 Length of aligned reigon: 154 Coverage over query: 6-178 Coverage over subject: 216-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5258, GTPBP1 GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1162, Predicted GTPases [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] |
| psy3751 | 967 | hhsearch probability: 99.61 Identity: 25% subject length: 454 Length of aligned reigon: 146 Coverage over query: 323-521 Coverage over subject: 216-369 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG2875, CobM Precorrin-4 methylase [Coenzyme metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0175, CysH 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes [Amino acid transport and metabolism / Coenzyme metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0007, CysG Uroporphyrinogen-III methylase [Coenzyme metabolism] COG2243, CobF Precorrin-2 methylase [Coenzyme metabolism] COG2241, CobL Precorrin-6B methylase 1 [Coenzyme metabolism] COG1010, CobJ Precorrin-3B methylase [Coenzyme metabolism] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0313, Predicted methyltransferases [General function prediction only] COG1798, DPH5 Diphthamide biosynthesis methyltransferase [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG3969, Predicted phosphoadenosine phosphosulfate sulfotransferase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0037, MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle control, cell division, chromosome partitioning] COG2262, HflX GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1606, ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0482, TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0603, Predicted PP-loop superfamily ATPase [General function prediction only] COG0519, GuaA GMP synthase, PP-ATPase domain/subunit [Nucleotide transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG2117, Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0171, NadE NAD synthase [Coenzyme metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0137, ArgG Argininosuccinate synthase [Amino acid transport and metabolism] |
| psy11743 | 551 | hhsearch probability: 99.49 Identity: 13% subject length: 454 Length of aligned reigon: 142 Coverage over query: 304-471 Coverage over subject: 215-377 |
COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2229, Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0523, Putative GTPases (G3E family) [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] |
| psy689 | 162 | hhsearch probability: 99.73 Identity: 21% subject length: 454 Length of aligned reigon: 136 Coverage over query: 17-158 Coverage over subject: 194-343 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1162, Predicted GTPases [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] |
| psy43 | 64 | hhsearch probability: 98.48 Identity: 25% subject length: 454 Length of aligned reigon: 52 Coverage over query: 9-62 Coverage over subject: 216-269 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1160, Predicted GTPases [General function prediction only] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1159, Era GTPase [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1162, Predicted GTPases [General function prediction only] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] |
| psy549 | 253 | hhsearch probability: 99.83 Identity: 21% subject length: 454 Length of aligned reigon: 155 Coverage over query: 46-213 Coverage over subject: 214-378 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1162, Predicted GTPases [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] |
| psy1524 | 592 | hhsearch probability: 99.73 Identity: 26% subject length: 454 Length of aligned reigon: 165 Coverage over query: 57-313 Coverage over subject: 212-378 |
COG5045, Ribosomal protein S10E [Translation, ribosomal structure and biogenesis] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] |
| psy1174 | 182 | hhsearch probability: 99.14 Identity: 16% subject length: 454 Length of aligned reigon: 114 Coverage over query: 16-169 Coverage over subject: 216-340 |
COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy2908 | 203 | hhsearch probability: 99.39 Identity: 19% subject length: 454 Length of aligned reigon: 95 Coverage over query: 76-202 Coverage over subject: 214-308 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1159, Era GTPase [General function prediction only] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy12765 | 541 | hhsearch probability: 99.65 Identity: 18% subject length: 454 Length of aligned reigon: 204 Coverage over query: 55-310 Coverage over subject: 216-450 |
COG5536, BET4 Protein prenyltransferase, alpha subunit [Posttranslational modification, protein turnover, chaperones] COG0218, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1159, Era GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG1162, Predicted GTPases [General function prediction only] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] |
| psy15203 | 263 | hhsearch probability: 92.31 Identity: 15% subject length: 454 Length of aligned reigon: 89 Coverage over query: 114-212 Coverage over subject: 278-378 |
COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5258, GTPBP1 GTPase [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] |
| psy10143 | 310 | hhsearch probability: 98.29 Identity: 15% subject length: 454 Length of aligned reigon: 96 Coverage over query: 204-309 Coverage over subject: 251-364 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0486, ThdF Predicted GTPase [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG2229, Predicted GTPase [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1161, Predicted GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] |
| psy933 | 330 | hhsearch probability: 97.46 Identity: 16% subject length: 454 Length of aligned reigon: 88 Coverage over query: 93-193 Coverage over subject: 217-306 |
COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG4639, Predicted kinase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1159, Era GTPase [General function prediction only] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG0218, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG0536, Obg Predicted GTPase [General function prediction only] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG4161, ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism] COG4185, Uncharacterized protein conserved in bacteria [Function unknown] |
| psy8073 | 593 | hhsearch probability: 99.91 Identity: 21% subject length: 454 Length of aligned reigon: 195 Coverage over query: 351-562 Coverage over subject: 175-378 |
COG0486, ThdF Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5126, FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG5185, HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1162, Predicted GTPases [General function prediction only] |
| psy2927 | 123 | hhsearch probability: 96.36 Identity: 19% subject length: 454 Length of aligned reigon: 47 Coverage over query: 1-47 Coverage over subject: 330-378 |
COG1163, DRG Predicted GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0317, SpoT Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription] COG2262, HflX GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1160, Predicted GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG2914, Uncharacterized protein conserved in bacteria [Function unknown] |
| psy1760 | 793 | hhsearch probability: 99.87 Identity: 24% subject length: 454 Length of aligned reigon: 234 Coverage over query: 102-402 Coverage over subject: 137-378 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0486, ThdF Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1161, Predicted GTPases [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] |
| psy15197 | 902 | hhsearch probability: 99.78 Identity: 24% subject length: 454 Length of aligned reigon: 122 Coverage over query: 233-392 Coverage over subject: 247-376 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5258, GTPBP1 GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG0753, KatE Catalase [Inorganic ion transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1162, Predicted GTPases [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1161, Predicted GTPases [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] |
| psy17091 | 1250 | hhsearch probability: 99.88 Identity: 29% subject length: 454 Length of aligned reigon: 160 Coverage over query: 3-165 Coverage over subject: 218-378 |
COG0124, HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0820, Predicted Fe-S-cluster redox enzyme [General function prediction only] COG3705, HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism] COG0105, Ndk Nucleoside diphosphate kinase [Nucleotide transport and metabolism] COG1159, Era GTPase [General function prediction only] COG0441, ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1160, Predicted GTPases [General function prediction only] COG1180, PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0423, GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG0442, ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0731, Fe-S oxidoreductases [Energy production and conversion] |
| psy15351 | 352 | hhsearch probability: 98.89 Identity: 19% subject length: 454 Length of aligned reigon: 93 Coverage over query: 3-103 Coverage over subject: 285-377 |
COG1161, Predicted GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG2262, HflX GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG2229, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1163, DRG Predicted GTPase [General function prediction only] |
| psy6781 | 534 | hhsearch probability: 98.84 Identity: 20% subject length: 454 Length of aligned reigon: 110 Coverage over query: 208-330 Coverage over subject: 267-376 |
COG1161, Predicted GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG2229, Predicted GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1163, DRG Predicted GTPase [General function prediction only] |
| psy17315 | 561 | hhsearch probability: 99.52 Identity: 26% subject length: 454 Length of aligned reigon: 163 Coverage over query: 241-447 Coverage over subject: 214-378 |
COG1163, DRG Predicted GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] |
| psy9995 | 595 | hhsearch probability: 99.12 Identity: 30% subject length: 454 Length of aligned reigon: 60 Coverage over query: 321-380 Coverage over subject: 216-278 |
COG1161, Predicted GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG0218, Predicted GTPase [General function prediction only] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG5265, ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] |
| psy8479 | 650 | hhsearch probability: 98.40 Identity: 22% subject length: 454 Length of aligned reigon: 127 Coverage over query: 106-245 Coverage over subject: 216-344 |
COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG5406, Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] COG3596, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG2229, Predicted GTPase [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG0218, Predicted GTPase [General function prediction only] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] |
| psy15006 | 152 | hhsearch probability: 91.27 Identity: 36% subject length: 454 Length of aligned reigon: 25 Coverage over query: 119-143 Coverage over subject: 216-240 |
COG0486, ThdF Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] |
| psy15355 | 143 | hhsearch probability: 98.69 Identity: 40% subject length: 454 Length of aligned reigon: 35 Coverage over query: 104-143 Coverage over subject: 215-249 |
COG1160, Predicted GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1159, Era GTPase [General function prediction only] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy3587 | 195 | hhsearch probability: 98.73 Identity: 17% subject length: 454 Length of aligned reigon: 54 Coverage over query: 22-75 Coverage over subject: 219-277 |
COG1159, Era GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] |
| psy6249 | 119 | hhsearch probability: 99.79 Identity: 26% subject length: 454 Length of aligned reigon: 90 Coverage over query: 2-91 Coverage over subject: 218-309 |
COG1163, DRG Predicted GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] |
| psy2401 | 363 | hhsearch probability: 99.79 Identity: 30% subject length: 454 Length of aligned reigon: 90 Coverage over query: 2-108 Coverage over subject: 217-308 |
COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG2229, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG4148, ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] |
| psy12598 | 900 | hhsearch probability: 99.84 Identity: 25% subject length: 454 Length of aligned reigon: 162 Coverage over query: 698-890 Coverage over subject: 215-378 |
COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG0072, PheT Phenylalanyl-tRNA synthetase beta subunit [Translation, ribosomal structure and biogenesis] COG0523, Putative GTPases (G3E family) [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1161, Predicted GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy6089 | 313 | hhsearch probability: 92.25 Identity: 10% subject length: 454 Length of aligned reigon: 63 Coverage over query: 100-165 Coverage over subject: 18-88 |
COG0404, GcvT Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism] COG0354, Predicted aminomethyltransferase related to GcvT [General function prediction only] COG4583, Sarcosine oxidase gamma subunit [Amino acid transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] |
| psy12715 | 262 | hhsearch probability: 95.06 Identity: 8% subject length: 454 Length of aligned reigon: 52 Coverage over query: 2-56 Coverage over subject: 17-69 |
COG0404, GcvT Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism] COG0354, Predicted aminomethyltransferase related to GcvT [General function prediction only] COG4583, Sarcosine oxidase gamma subunit [Amino acid transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] |
| psy3750 | 287 | hhsearch probability: 95.00 Identity: 12% subject length: 454 Length of aligned reigon: 52 Coverage over query: 3-55 Coverage over subject: 18-69 |
COG0404, GcvT Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism] COG0354, Predicted aminomethyltransferase related to GcvT [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG4583, Sarcosine oxidase gamma subunit [Amino acid transport and metabolism] |
| psy17023 | 241 | hhsearch probability: 95.54 Identity: 19% subject length: 454 Length of aligned reigon: 74 Coverage over query: 8-82 Coverage over subject: 18-101 |
COG0404, GcvT Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism] COG0354, Predicted aminomethyltransferase related to GcvT [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG4583, Sarcosine oxidase gamma subunit [Amino acid transport and metabolism] |
| psy7063 | 188 | hhsearch probability: 98.77 Identity: 20% subject length: 454 Length of aligned reigon: 80 Coverage over query: 59-138 Coverage over subject: 293-378 |
COG1163, DRG Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1160, Predicted GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG2229, Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0317, SpoT Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] |
| psy3395 | 775 | hhsearch probability: 98.75 Identity: 21% subject length: 454 Length of aligned reigon: 171 Coverage over query: 8-250 Coverage over subject: 192-364 |
COG0699, Predicted GTPases (dynamin-related) [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2229, Predicted GTPase [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1163, DRG Predicted GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0536, Obg Predicted GTPase [General function prediction only] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG3910, Predicted ATPase [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] |
| psy17089 | 419 | hhsearch probability: 99.93 Identity: 28% subject length: 454 Length of aligned reigon: 160 Coverage over query: 3-165 Coverage over subject: 218-378 |
COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG2229, Predicted GTPase [General function prediction only] |
| psy14200 | 225 | hhsearch probability: 96.09 Identity: 19% subject length: 454 Length of aligned reigon: 75 Coverage over query: 8-83 Coverage over subject: 18-102 |
COG0404, GcvT Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism] COG0354, Predicted aminomethyltransferase related to GcvT [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG4583, Sarcosine oxidase gamma subunit [Amino acid transport and metabolism] |
| psy914 | 333 | hhsearch probability: 99.56 Identity: 21% subject length: 454 Length of aligned reigon: 140 Coverage over query: 61-253 Coverage over subject: 226-368 |
COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG2262, HflX GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1192, Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG2229, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG2894, MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0489, Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG3596, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG5623, CLP1 Predicted GTPase subunit of the pre-mRNA cleavage complex [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0003, ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] COG1161, Predicted GTPases [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1348, NifH Nitrogenase subunit NifH (ATPase) [Inorganic ion transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG2403, Predicted GTPase [General function prediction only] COG1855, ATPase (PilT family) [General function prediction only] |
| psy15712 | 358 | hhsearch probability: 99.68 Identity: 27% subject length: 454 Length of aligned reigon: 110 Coverage over query: 237-357 Coverage over subject: 216-330 |
COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG2229, Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] |
| psy1007 | 445 | hhsearch probability: 99.70 Identity: 18% subject length: 454 Length of aligned reigon: 157 Coverage over query: 86-314 Coverage over subject: 60-224 |
COG1162, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0404, GcvT Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG2229, Predicted GTPase [General function prediction only] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy50 | 505 | hhsearch probability: 99.94 Identity: 25% subject length: 454 Length of aligned reigon: 245 Coverage over query: 164-441 Coverage over subject: 116-378 |
COG2262, HflX GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG2229, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy11175 | 367 | hhsearch probability: 99.82 Identity: 17% subject length: 454 Length of aligned reigon: 166 Coverage over query: 43-256 Coverage over subject: 220-391 |
COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2229, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5258, GTPBP1 GTPase [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] |
| psy13475 | 468 | hhsearch probability: 99.93 Identity: 25% subject length: 454 Length of aligned reigon: 194 Coverage over query: 8-264 Coverage over subject: 137-341 |
COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG2229, Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG5258, GTPBP1 GTPase [General function prediction only] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] |
| psy7797 | 691 | hhsearch probability: 99.73 Identity: 23% subject length: 454 Length of aligned reigon: 177 Coverage over query: 35-351 Coverage over subject: 152-338 |
COG0486, ThdF Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1161, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG4962, CpaF Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] |
| psy1008 | 290 | hhsearch probability: 99.86 Identity: 26% subject length: 454 Length of aligned reigon: 151 Coverage over query: 118-279 Coverage over subject: 299-451 |
COG0486, ThdF Predicted GTPase [General function prediction only] |
| psy7065 | 342 | hhsearch probability: 99.95 Identity: 19% subject length: 454 Length of aligned reigon: 160 Coverage over query: 135-324 Coverage over subject: 148-313 |
COG1163, DRG Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1159, Era GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] |
| psy18209 | 148 | hhsearch probability: 99.67 Identity: 22% subject length: 454 Length of aligned reigon: 89 Coverage over query: 38-137 Coverage over subject: 212-309 |
COG0486, ThdF Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG2229, Predicted GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] |
| psy9409 | 472 | hhsearch probability: 100.00 Identity: 43% subject length: 454 Length of aligned reigon: 449 Coverage over query: 4-472 Coverage over subject: 3-454 |
COG0486, ThdF Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG2229, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG0404, GcvT Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1161, Predicted GTPases [General function prediction only] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] |