| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG0507 |
All predicted COG clusters |
|---|---|---|---|
| psy10411 | 620 | hhsearch probability: 98.82 Identity: 28% subject length: 696 Length of aligned reigon: 171 Coverage over query: 117-338 Coverage over subject: 318-495 |
COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1137, YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG4133, CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG4161, ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG5265, ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4148, ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism] COG4778, PhnL ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] COG4674, Uncharacterized ABC-type transport system, ATPase component [General function prediction only] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG4138, BtuD ABC-type cobalamin transport system, ATPase component [Coenzyme metabolism] COG2401, ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only] COG1245, Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only] COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG4170, SapD ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3910, Predicted ATPase [General function prediction only] COG1129, MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] COG0178, UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] |
| psy12659 | 1051 | hhsearch probability: 94.40 Identity: 23% subject length: 696 Length of aligned reigon: 69 Coverage over query: 172-242 Coverage over subject: 314-382 |
COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] COG5262, HTA1 Histone H2A [Chromatin structure and dynamics] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] COG1201, Lhr Lhr-like helicases [General function prediction only] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] |
| psy9392 | 168 | hhsearch probability: 95.95 Identity: 19% subject length: 696 Length of aligned reigon: 107 Coverage over query: 34-142 Coverage over subject: 219-377 |
COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG4098, comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] COG1197, Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG0714, MoxR-like ATPases [General function prediction only] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1444, Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1204, Superfamily II helicase [General function prediction only] COG0542, clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] COG4240, Predicted kinase [General function prediction only] COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0465, HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG1702, PhoH Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms] COG1855, ATPase (PilT family) [General function prediction only] COG3267, ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1435, Tdk Thymidine kinase [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG2607, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG1201, Lhr Lhr-like helicases [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG4962, CpaF Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG3911, Predicted ATPase [General function prediction only] COG4650, RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG3972, Superfamily I DNA and RNA helicases [General function prediction only] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] |
| psy4898 | 2274 | hhsearch probability: 95.68 Identity: 26% subject length: 696 Length of aligned reigon: 57 Coverage over query: 1403-1474 Coverage over subject: 623-679 |
COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG3972, Superfamily I DNA and RNA helicases [General function prediction only] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] COG1702, PhoH Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms] COG1110, Reverse gyrase [DNA replication, recombination, and repair] COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG1204, Superfamily II helicase [General function prediction only] COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair] COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] COG4098, comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair] COG0513, SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG4889, Predicted helicase [General function prediction only] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1201, Lhr Lhr-like helicases [General function prediction only] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG1197, Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription] |
| psy15218 | 5957 | hhsearch probability: 94.21 Identity: 19% subject length: 696 Length of aligned reigon: 62 Coverage over query: 2785-2846 Coverage over subject: 203-272 |
COG3857, AddB ATP-dependent nuclease, subunit B [DNA replication, recombination, and repair] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] COG3893, Inactivated superfamily I helicase [DNA replication, recombination, and repair] COG1330, RecC Exonuclease V gamma subunit [DNA replication, recombination, and repair] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG0828, RpsU Ribosomal protein S21 [Translation, ribosomal structure and biogenesis] COG2887, RecB family exonuclease [DNA replication, recombination, and repair] COG3972, Superfamily I DNA and RNA helicases [General function prediction only] COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms] COG4343, CRISPR-associated protein, RecB family exonuclease [Defense mechanisms] COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] |
| psy16283 | 467 | hhsearch probability: 97.11 Identity: 30% subject length: 696 Length of aligned reigon: 47 Coverage over query: 1-54 Coverage over subject: 335-381 |
COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1110, Reverse gyrase [DNA replication, recombination, and repair] COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3972, Superfamily I DNA and RNA helicases [General function prediction only] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG4889, Predicted helicase [General function prediction only] COG0513, SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG4098, comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG1855, ATPase (PilT family) [General function prediction only] COG0714, MoxR-like ATPases [General function prediction only] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3911, Predicted ATPase [General function prediction only] COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] |
| psy18130 | 3707 | hhsearch probability: 98.49 Identity: 18% subject length: 696 Length of aligned reigon: 55 Coverage over query: 3021-3081 Coverage over subject: 622-676 |
COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG3972, Superfamily I DNA and RNA helicases [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] |
| psy15219 | 1126 | hhsearch probability: 96.89 Identity: 37% subject length: 696 Length of aligned reigon: 51 Coverage over query: 807-902 Coverage over subject: 620-670 |
COG3857, AddB ATP-dependent nuclease, subunit B [DNA replication, recombination, and repair] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG3972, Superfamily I DNA and RNA helicases [General function prediction only] COG3893, Inactivated superfamily I helicase [DNA replication, recombination, and repair] COG1330, RecC Exonuclease V gamma subunit [DNA replication, recombination, and repair] COG2887, RecB family exonuclease [DNA replication, recombination, and repair] COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG1201, Lhr Lhr-like helicases [General function prediction only] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] |
| psy3902 | 181 | hhsearch probability: 94.61 Identity: 23% subject length: 696 Length of aligned reigon: 47 Coverage over query: 65-112 Coverage over subject: 407-453 |
COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] |
| psy4476 | 266 | hhsearch probability: 96.94 Identity: 14% subject length: 696 Length of aligned reigon: 118 Coverage over query: 132-251 Coverage over subject: 200-348 |
COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG0714, MoxR-like ATPases [General function prediction only] COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG1137, YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG4962, CpaF Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion] COG3911, Predicted ATPase [General function prediction only] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] COG1702, PhoH Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms] |
| psy3251 | 959 | hhsearch probability: 99.43 Identity: 23% subject length: 696 Length of aligned reigon: 134 Coverage over query: 503-708 Coverage over subject: 318-454 |
COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG3972, Superfamily I DNA and RNA helicases [General function prediction only] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG1702, PhoH Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms] COG1204, Superfamily II helicase [General function prediction only] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG0513, SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] COG1110, Reverse gyrase [DNA replication, recombination, and repair] COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG4098, comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] COG1201, Lhr Lhr-like helicases [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG4889, Predicted helicase [General function prediction only] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1444, Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] COG1197, Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription] COG0714, MoxR-like ATPases [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3857, AddB ATP-dependent nuclease, subunit B [DNA replication, recombination, and repair] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1202, Superfamily II helicase, archaea-specific [General function prediction only] COG3911, Predicted ATPase [General function prediction only] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] |
| psy5519 | 884 | hhsearch probability: 99.09 Identity: 29% subject length: 696 Length of aligned reigon: 69 Coverage over query: 137-226 Coverage over subject: 311-379 |
COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG3972, Superfamily I DNA and RNA helicases [General function prediction only] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] COG1110, Reverse gyrase [DNA replication, recombination, and repair] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1702, PhoH Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG0714, MoxR-like ATPases [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] COG0513, SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] COG4889, Predicted helicase [General function prediction only] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG1855, ATPase (PilT family) [General function prediction only] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG1204, Superfamily II helicase [General function prediction only] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] |
| psy1474 | 388 | hhsearch probability: 94.66 Identity: 29% subject length: 696 Length of aligned reigon: 56 Coverage over query: 33-94 Coverage over subject: 622-677 |
COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] |
| psy14397 | 883 | hhsearch probability: 98.05 Identity: 17% subject length: 696 Length of aligned reigon: 78 Coverage over query: 765-861 Coverage over subject: 600-682 |
COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] COG4962, CpaF Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion] COG1444, Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0714, MoxR-like ATPases [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] |
| psy844 | 912 | hhsearch probability: 98.72 Identity: 28% subject length: 696 Length of aligned reigon: 57 Coverage over query: 813-884 Coverage over subject: 620-676 |
COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] COG3972, Superfamily I DNA and RNA helicases [General function prediction only] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] |
| psy12660 | 294 | hhsearch probability: 97.06 Identity: 26% subject length: 696 Length of aligned reigon: 54 Coverage over query: 100-156 Coverage over subject: 623-676 |
COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] |
| psy16380 | 106 | hhsearch probability: 97.88 Identity: 29% subject length: 696 Length of aligned reigon: 58 Coverage over query: 7-77 Coverage over subject: 403-460 |
COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] |
| psy975 | 265 | hhsearch probability: 99.13 Identity: 20% subject length: 696 Length of aligned reigon: 203 Coverage over query: 29-261 Coverage over subject: 333-613 |
COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4133, CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1129, MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1137, YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG4778, PhnL ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG4674, Uncharacterized ABC-type transport system, ATPase component [General function prediction only] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4138, BtuD ABC-type cobalamin transport system, ATPase component [Coenzyme metabolism] COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4148, ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG4161, ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] |
| psy7491 | 660 | hhsearch probability: 99.35 Identity: 21% subject length: 696 Length of aligned reigon: 216 Coverage over query: 27-297 Coverage over subject: 355-596 |
COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] |
| psy3783 | 172 | hhsearch probability: 91.22 Identity: 24% subject length: 696 Length of aligned reigon: 33 Coverage over query: 137-170 Coverage over subject: 560-592 |
COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] |
| psy3527 | 365 | hhsearch probability: 99.38 Identity: 18% subject length: 696 Length of aligned reigon: 101 Coverage over query: 122-225 Coverage over subject: 560-668 |
COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] |
| psy3524 | 1056 | hhsearch probability: 99.86 Identity: 22% subject length: 696 Length of aligned reigon: 243 Coverage over query: 723-1015 Coverage over subject: 407-676 |
COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] |
| psy14732 | 431 | hhsearch probability: 99.83 Identity: 27% subject length: 696 Length of aligned reigon: 132 Coverage over query: 264-428 Coverage over subject: 524-668 |
COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] |
| psy16049 | 177 | hhsearch probability: 99.13 Identity: 21% subject length: 696 Length of aligned reigon: 56 Coverage over query: 34-127 Coverage over subject: 613-668 |
COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] |
| psy12471 | 81 | hhsearch probability: 96.54 Identity: 14% subject length: 696 Length of aligned reigon: 49 Coverage over query: 5-56 Coverage over subject: 618-668 |
COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] |
| psy14399 | 73 | hhsearch probability: 98.92 Identity: 22% subject length: 696 Length of aligned reigon: 69 Coverage over query: 3-71 Coverage over subject: 561-635 |
COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] |
| psy14809 | 90 | hhsearch probability: 99.89 Identity: 29% subject length: 696 Length of aligned reigon: 89 Coverage over query: 1-90 Coverage over subject: 570-668 |
COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] |
| psy10403 | 153 | hhsearch probability: 99.57 Identity: 21% subject length: 696 Length of aligned reigon: 82 Coverage over query: 29-152 Coverage over subject: 562-643 |
COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] |