| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG0541 |
All predicted COG clusters |
|---|---|---|---|
| psy1524 | 592 | hhsearch probability: 91.34 Identity: 12% subject length: 451 Length of aligned reigon: 25 Coverage over query: 59-83 Coverage over subject: 97-121 |
COG5045, Ribosomal protein S10E [Translation, ribosomal structure and biogenesis] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] |
| psy12244 | 257 | hhsearch probability: 96.06 Identity: 19% subject length: 451 Length of aligned reigon: 27 Coverage over query: 25-51 Coverage over subject: 97-123 |
COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2229, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1161, Predicted GTPases [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] |
| psy2637 | 502 | hhsearch probability: 96.17 Identity: 21% subject length: 451 Length of aligned reigon: 203 Coverage over query: 259-477 Coverage over subject: 98-338 |
COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG0465, HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG3604, FhlA Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms] COG1221, PspF Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG3283, TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG2607, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG0542, clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] COG1220, HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG4650, RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG0714, MoxR-like ATPases [General function prediction only] COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] COG1239, ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism] COG1241, MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG3267, ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5271, MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms] COG4567, Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1485, Predicted ATPase [General function prediction only] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG5245, DYN1 Dynein, heavy chain [Cytoskeleton] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG0745, OmpR Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] |
| psy1169 | 218 | hhsearch probability: 96.96 Identity: 16% subject length: 451 Length of aligned reigon: 25 Coverage over query: 12-36 Coverage over subject: 97-121 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1162, Predicted GTPases [General function prediction only] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0802, Predicted ATPase or kinase [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] |
| psy17062 | 520 | hhsearch probability: 97.53 Identity: 13% subject length: 451 Length of aligned reigon: 215 Coverage over query: 126-358 Coverage over subject: 53-338 |
COG0542, clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG1221, PspF Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG2607, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG3604, FhlA Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG5271, MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG1220, HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG3267, ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] COG1239, ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism] COG3283, TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] COG3899, Predicted ATPase [General function prediction only] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG4650, RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG1241, MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG0465, HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1485, Predicted ATPase [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] COG2842, Uncharacterized ATPase, putative transposase [General function prediction only] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] COG0714, MoxR-like ATPases [General function prediction only] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] |
| psy1315 | 202 | hhsearch probability: 97.24 Identity: 18% subject length: 451 Length of aligned reigon: 115 Coverage over query: 16-137 Coverage over subject: 97-251 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5258, GTPBP1 GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1162, Predicted GTPases [General function prediction only] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG4962, CpaF Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] |
| psy2970 | 329 | hhsearch probability: 94.98 Identity: 46% subject length: 451 Length of aligned reigon: 24 Coverage over query: 18-41 Coverage over subject: 98-121 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1162, Predicted GTPases [General function prediction only] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] |
| psy8700 | 200 | hhsearch probability: 97.38 Identity: 16% subject length: 451 Length of aligned reigon: 113 Coverage over query: 5-128 Coverage over subject: 98-251 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0802, Predicted ATPase or kinase [General function prediction only] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] |
| psy11835 | 601 | hhsearch probability: 96.05 Identity: 19% subject length: 451 Length of aligned reigon: 130 Coverage over query: 75-207 Coverage over subject: 98-252 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0486, ThdF Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1161, Predicted GTPases [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1192, Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] COG1162, Predicted GTPases [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] |
| psy1695 | 202 | hhsearch probability: 97.21 Identity: 13% subject length: 451 Length of aligned reigon: 135 Coverage over query: 28-173 Coverage over subject: 72-229 |
COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG0714, MoxR-like ATPases [General function prediction only] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG0465, HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG3604, FhlA Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms] COG1221, PspF Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG0542, clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] COG1220, HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG1239, ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism] COG3283, TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG4650, RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG2607, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1485, Predicted ATPase [General function prediction only] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1241, MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG3267, ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG5271, MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG4098, comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] |
| psy4710 | 192 | hhsearch probability: 97.50 Identity: 17% subject length: 451 Length of aligned reigon: 92 Coverage over query: 4-95 Coverage over subject: 99-231 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] |
| psy14754 | 192 | hhsearch probability: 97.50 Identity: 17% subject length: 451 Length of aligned reigon: 92 Coverage over query: 4-95 Coverage over subject: 99-231 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] |
| psy10443 | 195 | hhsearch probability: 97.33 Identity: 24% subject length: 451 Length of aligned reigon: 25 Coverage over query: 4-28 Coverage over subject: 98-122 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG3596, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1161, Predicted GTPases [General function prediction only] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy12173 | 224 | hhsearch probability: 96.62 Identity: 18% subject length: 451 Length of aligned reigon: 99 Coverage over query: 50-148 Coverage over subject: 98-238 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1161, Predicted GTPases [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] |
| psy15197 | 902 | hhsearch probability: 96.29 Identity: 28% subject length: 451 Length of aligned reigon: 64 Coverage over query: 249-324 Coverage over subject: 181-252 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5258, GTPBP1 GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG0753, KatE Catalase [Inorganic ion transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1162, Predicted GTPases [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1161, Predicted GTPases [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] |
| psy12598 | 900 | hhsearch probability: 91.95 Identity: 14% subject length: 451 Length of aligned reigon: 109 Coverage over query: 769-889 Coverage over subject: 183-312 |
COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG0072, PheT Phenylalanyl-tRNA synthetase beta subunit [Translation, ribosomal structure and biogenesis] COG0523, Putative GTPases (G3E family) [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1161, Predicted GTPases [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy10358 | 249 | hhsearch probability: 93.43 Identity: 16% subject length: 451 Length of aligned reigon: 74 Coverage over query: 124-203 Coverage over subject: 180-263 |
COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG2229, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1163, DRG Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy10504 | 286 | hhsearch probability: 96.23 Identity: 18% subject length: 451 Length of aligned reigon: 84 Coverage over query: 152-248 Coverage over subject: 183-273 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2262, HflX GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1161, Predicted GTPases [General function prediction only] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy871 | 249 | hhsearch probability: 97.60 Identity: 20% subject length: 451 Length of aligned reigon: 125 Coverage over query: 19-161 Coverage over subject: 98-230 |
COG1159, Era GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1160, Predicted GTPases [General function prediction only] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG3596, Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5258, GTPBP1 GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy1694 | 247 | hhsearch probability: 96.42 Identity: 15% subject length: 451 Length of aligned reigon: 113 Coverage over query: 105-231 Coverage over subject: 98-231 |
COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] COG3604, FhlA Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG1221, PspF Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG3283, TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG4650, RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG0714, MoxR-like ATPases [General function prediction only] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG0465, HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] COG1239, ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism] COG0542, clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] COG1220, HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG2607, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1485, Predicted ATPase [General function prediction only] COG1241, MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG3267, ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] COG5271, MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG0802, Predicted ATPase or kinase [General function prediction only] COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] |
| psy16810 | 755 | hhsearch probability: 95.95 Identity: 18% subject length: 451 Length of aligned reigon: 144 Coverage over query: 7-156 Coverage over subject: 99-252 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1162, Predicted GTPases [General function prediction only] COG1161, Predicted GTPases [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] |
| psy6316 | 259 | hhsearch probability: 97.52 Identity: 24% subject length: 451 Length of aligned reigon: 62 Coverage over query: 95-159 Coverage over subject: 184-252 |
COG1159, Era GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1161, Predicted GTPases [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] |
| psy1914 | 211 | hhsearch probability: 97.44 Identity: 26% subject length: 451 Length of aligned reigon: 92 Coverage over query: 8-99 Coverage over subject: 97-232 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1163, DRG Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1161, Predicted GTPases [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy4433 | 211 | hhsearch probability: 97.45 Identity: 26% subject length: 451 Length of aligned reigon: 92 Coverage over query: 8-99 Coverage over subject: 97-232 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1084, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1163, DRG Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1161, Predicted GTPases [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy13674 | 315 | hhsearch probability: 93.10 Identity: 24% subject length: 451 Length of aligned reigon: 126 Coverage over query: 87-230 Coverage over subject: 11-153 |
COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG0305, DnaB Replicative DNA helicase [DNA replication, recombination, and repair] COG3598, RepA RecA-family ATPase [DNA replication, recombination, and repair] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1157, FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] |
| psy3124 | 463 | hhsearch probability: 97.72 Identity: 20% subject length: 451 Length of aligned reigon: 127 Coverage over query: 42-175 Coverage over subject: 97-253 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1161, Predicted GTPases [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG4148, ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] |
| psy9409 | 472 | hhsearch probability: 96.90 Identity: 16% subject length: 451 Length of aligned reigon: 169 Coverage over query: 199-381 Coverage over subject: 73-282 |
COG0486, ThdF Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG2229, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG0404, GcvT Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1161, Predicted GTPases [General function prediction only] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] |
| psy16204 | 577 | hhsearch probability: 96.29 Identity: 27% subject length: 451 Length of aligned reigon: 37 Coverage over query: 246-282 Coverage over subject: 99-138 |
COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG0465, HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] COG1220, HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG3604, FhlA Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] COG1221, PspF Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG0714, MoxR-like ATPases [General function prediction only] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG0542, clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] COG2607, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1239, ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG4650, RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG3283, TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG5271, MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1485, Predicted ATPase [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1241, MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only] |
| psy15217 | 396 | hhsearch probability: 97.92 Identity: 20% subject length: 451 Length of aligned reigon: 130 Coverage over query: 9-143 Coverage over subject: 97-254 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1161, Predicted GTPases [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] |
| psy13961 | 459 | hhsearch probability: 97.76 Identity: 26% subject length: 451 Length of aligned reigon: 136 Coverage over query: 4-159 Coverage over subject: 97-253 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1161, Predicted GTPases [General function prediction only] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy3764 | 354 | hhsearch probability: 96.60 Identity: 29% subject length: 451 Length of aligned reigon: 34 Coverage over query: 2-35 Coverage over subject: 103-136 |
COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG2326, Uncharacterized conserved protein [Function unknown] COG4639, Predicted kinase [General function prediction only] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3911, Predicted ATPase [General function prediction only] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1855, ATPase (PilT family) [General function prediction only] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG1466, HolA DNA polymerase III, delta subunit [DNA replication, recombination, and repair] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG4240, Predicted kinase [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] |
| psy8869 | 593 | hhsearch probability: 97.84 Identity: 23% subject length: 451 Length of aligned reigon: 127 Coverage over query: 9-142 Coverage over subject: 97-253 |
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0250, NusG Transcription antiterminator [Transcription] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3596, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1161, Predicted GTPases [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1162, Predicted GTPases [General function prediction only] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] |
| psy10355 | 156 | hhsearch probability: 93.87 Identity: 22% subject length: 451 Length of aligned reigon: 64 Coverage over query: 28-102 Coverage over subject: 181-251 |
COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1161, Predicted GTPases [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] |
| psy12559 | 610 | hhsearch probability: 94.67 Identity: 20% subject length: 451 Length of aligned reigon: 146 Coverage over query: 24-201 Coverage over subject: 181-342 |
COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG5258, GTPBP1 GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0218, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] |
| psy13475 | 468 | hhsearch probability: 96.65 Identity: 21% subject length: 451 Length of aligned reigon: 70 Coverage over query: 184-261 Coverage over subject: 183-253 |
COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1163, DRG Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG2229, Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1162, Predicted GTPases [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0523, Putative GTPases (G3E family) [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG5258, GTPBP1 GTPase [General function prediction only] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] |
| psy2609 | 161 | hhsearch probability: 92.68 Identity: 29% subject length: 451 Length of aligned reigon: 63 Coverage over query: 40-105 Coverage over subject: 182-251 |
COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1159, Era GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG2229, Predicted GTPase [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1160, Predicted GTPases [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG5258, GTPBP1 GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG2262, HflX GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1162, Predicted GTPases [General function prediction only] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] COG1161, Predicted GTPases [General function prediction only] |
| psy11510 | 171 | hhsearch probability: 97.82 Identity: 16% subject length: 451 Length of aligned reigon: 80 Coverage over query: 35-114 Coverage over subject: 97-237 |
COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG0218, Predicted GTPase [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG3596, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0536, Obg Predicted GTPase [General function prediction only] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1161, Predicted GTPases [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport] COG1162, Predicted GTPases [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] |
| psy12410 | 615 | hhsearch probability: 94.32 Identity: 16% subject length: 451 Length of aligned reigon: 130 Coverage over query: 366-528 Coverage over subject: 103-235 |
COG0513, SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] COG1201, Lhr Lhr-like helicases [General function prediction only] COG1202, Superfamily II helicase, archaea-specific [General function prediction only] COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only] COG0514, RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] COG1204, Superfamily II helicase [General function prediction only] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG1197, Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription] COG4581, Superfamily II RNA helicase [DNA replication, recombination, and repair] COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] COG1110, Reverse gyrase [DNA replication, recombination, and repair] COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] COG4889, Predicted helicase [General function prediction only] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG0653, SecA Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking and secretion] COG3587, Restriction endonuclease [Defense mechanisms] COG0553, HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] COG3421, Uncharacterized protein conserved in bacteria [Function unknown] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] COG1444, Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG2109, BtuR ATP:corrinoid adenosyltransferase [Coenzyme metabolism] COG4626, Phage terminase-like protein, large subunit [General function prediction only] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG1435, Tdk Thymidine kinase [Nucleotide transport and metabolism] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG4962, CpaF Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG3972, Superfamily I DNA and RNA helicases [General function prediction only] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG5008, PilU Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG1485, Predicted ATPase [General function prediction only] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG0630, VirB11 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis [Cell motility and secretion / Intracellular trafficking and secretion] COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG4098, comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair] COG1221, PspF Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] |
| psy15712 | 358 | hhsearch probability: 97.21 Identity: 16% subject length: 451 Length of aligned reigon: 104 Coverage over query: 237-345 Coverage over subject: 99-238 |
COG1084, Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG1159, Era GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1161, Predicted GTPases [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1162, Predicted GTPases [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG2229, Predicted GTPase [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] |
| psy200 | 490 | hhsearch probability: 97.48 Identity: 15% subject length: 451 Length of aligned reigon: 92 Coverage over query: 218-312 Coverage over subject: 99-196 |
COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG0465, HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] COG1221, PspF Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG3267, ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG3604, FhlA Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms] COG0542, clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] COG2607, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG0714, MoxR-like ATPases [General function prediction only] COG1239, ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism] COG1220, HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG3283, TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] COG3899, Predicted ATPase [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG4650, RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG1241, MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG2842, Uncharacterized ATPase, putative transposase [General function prediction only] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG5271, MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1485, Predicted ATPase [General function prediction only] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] |
| psy9618 | 542 | hhsearch probability: 95.01 Identity: 36% subject length: 451 Length of aligned reigon: 42 Coverage over query: 40-81 Coverage over subject: 97-140 |
COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG4240, Predicted kinase [General function prediction only] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0035, Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism] COG3954, PrkB Phosphoribulokinase [Energy production and conversion] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG4639, Predicted kinase [General function prediction only] COG0645, Predicted kinase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG3911, Predicted ATPase [General function prediction only] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG0802, Predicted ATPase or kinase [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG1855, ATPase (PilT family) [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG0542, clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] |
| psy5059 | 1036 | hhsearch probability: 95.45 Identity: 19% subject length: 451 Length of aligned reigon: 43 Coverage over query: 239-288 Coverage over subject: 181-223 |
COG1160, Predicted GTPases [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG0218, Predicted GTPase [General function prediction only] COG0536, Obg Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG2229, Predicted GTPase [General function prediction only] COG0486, ThdF Predicted GTPase [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1161, Predicted GTPases [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3596, Predicted GTPase [General function prediction only] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG1162, Predicted GTPases [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0699, Predicted GTPases (dynamin-related) [General function prediction only] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] |
| psy9392 | 168 | hhsearch probability: 95.77 Identity: 12% subject length: 451 Length of aligned reigon: 95 Coverage over query: 14-109 Coverage over subject: 75-192 |
COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG4098, comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] COG1197, Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG0714, MoxR-like ATPases [General function prediction only] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1444, Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1204, Superfamily II helicase [General function prediction only] COG0542, clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] COG4240, Predicted kinase [General function prediction only] COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0465, HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG1702, PhoH Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms] COG1855, ATPase (PilT family) [General function prediction only] COG3267, ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1435, Tdk Thymidine kinase [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG2607, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG1201, Lhr Lhr-like helicases [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG4962, CpaF Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG3911, Predicted ATPase [General function prediction only] COG4650, RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG3972, Superfamily I DNA and RNA helicases [General function prediction only] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] |
| psy890 | 131 | hhsearch probability: 92.17 Identity: 19% subject length: 451 Length of aligned reigon: 105 Coverage over query: 3-122 Coverage over subject: 103-223 |
COG2226, UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] COG2227, UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] COG2230, Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] COG4106, Tam Trans-aconitate methyltransferase [General function prediction only] COG4123, Predicted O-methyltransferase [General function prediction only] COG2518, Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] COG2813, RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis] COG2519, GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis] COG2242, CobL Precorrin-6B methylase 2 [Coenzyme metabolism] COG2264, PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] COG2890, HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis] COG4122, Predicted O-methyltransferase [General function prediction only] COG0220, Predicted S-adenosylmethionine-dependent methyltransferase [General function prediction only] COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only] COG3963, Phospholipid N-methyltransferase [Lipid metabolism] COG1352, CheR Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms] COG0421, SpeE Spermidine synthase [Amino acid transport and metabolism] COG2263, Predicted RNA methylase [Translation, ribosomal structure and biogenesis] COG1092, Predicted SAM-dependent methyltransferases [General function prediction only] COG1041, Predicted DNA modification methylase [DNA replication, recombination, and repair] COG2520, Predicted methyltransferase [General function prediction only] COG2521, Predicted archaeal methyltransferase [General function prediction only] COG0500, SmtA SAM-dependent methyltransferases [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] COG0030, KsgA Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis] COG4798, Predicted methyltransferase [General function prediction only] COG0742, N6-adenine-specific methylase [DNA replication, recombination, and repair] COG0116, Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair] COG0144, Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] COG0293, FtsJ 23S rRNA methylase [Translation, ribosomal structure and biogenesis] COG2265, TrmA SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis] COG0357, GidB Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane] COG3897, Predicted methyltransferase [General function prediction only] COG4076, Predicted RNA methylase [General function prediction only] COG4262, Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only] COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane] COG1889, NOP1 Fibrillarin-like rRNA methylase [Translation, ribosomal structure and biogenesis] COG5459, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2384, Predicted SAM-dependent methyltransferase [General function prediction only] COG4627, Uncharacterized protein conserved in bacteria [Function unknown] COG4301, Uncharacterized conserved protein [Function unknown] COG1565, Uncharacterized conserved protein [Function unknown] COG1064, AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] COG0286, HsdM Type I restriction-modification system methyltransferase subunit [Defense mechanisms] COG1867, TRM1 N2,N2-dimethylguanosine tRNA methyltransferase [Translation, ribosomal structure and biogenesis] COG1063, Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] COG0686, Ald Alanine dehydrogenase [Amino acid transport and metabolism] COG3129, Predicted SAM-dependent methyltransferase [General function prediction only] COG0270, Dcm Site-specific DNA methylase [DNA replication, recombination, and repair] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] |
| psy4598 | 369 | hhsearch probability: 97.32 Identity: 35% subject length: 451 Length of aligned reigon: 37 Coverage over query: 271-307 Coverage over subject: 99-140 |
COG0241, HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] COG0546, Gph Predicted phosphatases [General function prediction only] COG4639, Predicted kinase [General function prediction only] COG0645, Predicted kinase [General function prediction only] COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG0647, NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG4185, Uncharacterized protein conserved in bacteria [Function unknown] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0560, SerB Phosphoserine phosphatase [Amino acid transport and metabolism] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1778, Low specificity phosphatase (HAD superfamily) [General function prediction only] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG4996, Predicted phosphatase [General function prediction only] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0561, Cof Predicted hydrolases of the HAD superfamily [General function prediction only] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG4359, Uncharacterized conserved protein [Function unknown] COG4087, Soluble P-type ATPase [General function prediction only] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG3769, Predicted hydrolase (HAD superfamily) [General function prediction only] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG3700, AphA Acid phosphatase (class B) [General function prediction only] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] |
| psy3251 | 959 | hhsearch probability: 93.99 Identity: 30% subject length: 451 Length of aligned reigon: 56 Coverage over query: 521-577 Coverage over subject: 102-160 |
COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG3972, Superfamily I DNA and RNA helicases [General function prediction only] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG1702, PhoH Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms] COG1204, Superfamily II helicase [General function prediction only] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG0513, SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] COG1110, Reverse gyrase [DNA replication, recombination, and repair] COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG4098, comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] COG1201, Lhr Lhr-like helicases [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG4889, Predicted helicase [General function prediction only] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1444, Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] COG1197, Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription] COG0714, MoxR-like ATPases [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3857, AddB ATP-dependent nuclease, subunit B [DNA replication, recombination, and repair] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1202, Superfamily II helicase, archaea-specific [General function prediction only] COG3911, Predicted ATPase [General function prediction only] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] |
| psy6801 | 228 | hhsearch probability: 97.30 Identity: 17% subject length: 451 Length of aligned reigon: 107 Coverage over query: 6-114 Coverage over subject: 99-219 |
COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG4639, Predicted kinase [General function prediction only] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG4185, Uncharacterized protein conserved in bacteria [Function unknown] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG1220, HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3911, Predicted ATPase [General function prediction only] COG4240, Predicted kinase [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1855, ATPase (PilT family) [General function prediction only] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0714, MoxR-like ATPases [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG0802, Predicted ATPase or kinase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] |
| psy914 | 333 | hhsearch probability: 98.76 Identity: 33% subject length: 451 Length of aligned reigon: 30 Coverage over query: 3-32 Coverage over subject: 110-139 |
COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0536, Obg Predicted GTPase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG2262, HflX GTPases [General function prediction only] COG0218, Predicted GTPase [General function prediction only] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1084, Predicted GTPase [General function prediction only] COG1192, Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG1163, DRG Predicted GTPase [General function prediction only] COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] COG2229, Predicted GTPase [General function prediction only] COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG2894, MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0489, Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG3596, Predicted GTPase [General function prediction only] COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism] COG5258, GTPBP1 GTPase [General function prediction only] COG5623, CLP1 Predicted GTPase subunit of the pre-mRNA cleavage complex [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0003, ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] COG1161, Predicted GTPases [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] COG1348, NifH Nitrogenase subunit NifH (ATPase) [Inorganic ion transport and metabolism] COG1162, Predicted GTPases [General function prediction only] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG2403, Predicted GTPase [General function prediction only] COG1855, ATPase (PilT family) [General function prediction only] |
| psy11490 | 147 | hhsearch probability: 97.76 Identity: 25% subject length: 451 Length of aligned reigon: 51 Coverage over query: 17-67 Coverage over subject: 90-141 |
COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG4240, Predicted kinase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] |
| psy496 | 319 | hhsearch probability: 95.76 Identity: 15% subject length: 451 Length of aligned reigon: 135 Coverage over query: 69-226 Coverage over subject: 100-236 |
COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] COG0513, SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] COG1201, Lhr Lhr-like helicases [General function prediction only] COG1204, Superfamily II helicase [General function prediction only] COG1202, Superfamily II helicase, archaea-specific [General function prediction only] COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only] COG4581, Superfamily II RNA helicase [DNA replication, recombination, and repair] COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair] COG4098, comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair] COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG1197, Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription] COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms] COG0514, RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] COG1110, Reverse gyrase [DNA replication, recombination, and repair] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG4889, Predicted helicase [General function prediction only] COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG1444, Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3587, Restriction endonuclease [Defense mechanisms] COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] COG3421, Uncharacterized protein conserved in bacteria [Function unknown] COG1435, Tdk Thymidine kinase [Nucleotide transport and metabolism] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG4962, CpaF Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG0542, clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG1221, PspF Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG3267, ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] |
| psy16874 | 227 | hhsearch probability: 97.47 Identity: 37% subject length: 451 Length of aligned reigon: 38 Coverage over query: 6-43 Coverage over subject: 98-135 |
COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG2326, Uncharacterized conserved protein [Function unknown] COG3911, Predicted ATPase [General function prediction only] COG4639, Predicted kinase [General function prediction only] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1855, ATPase (PilT family) [General function prediction only] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG4240, Predicted kinase [General function prediction only] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0802, Predicted ATPase or kinase [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy1090 | 169 | hhsearch probability: 95.45 Identity: 9% subject length: 451 Length of aligned reigon: 33 Coverage over query: 5-39 Coverage over subject: 105-137 |
COG0553, HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG1197, Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription] COG4889, Predicted helicase [General function prediction only] COG1204, Superfamily II helicase [General function prediction only] COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only] COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG0513, SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] COG4098, comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair] COG1201, Lhr Lhr-like helicases [General function prediction only] COG0514, RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] COG1110, Reverse gyrase [DNA replication, recombination, and repair] COG3587, Restriction endonuclease [Defense mechanisms] COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] COG1202, Superfamily II helicase, archaea-specific [General function prediction only] COG4581, Superfamily II RNA helicase [DNA replication, recombination, and repair] COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] COG3421, Uncharacterized protein conserved in bacteria [Function unknown] COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1435, Tdk Thymidine kinase [Nucleotide transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0003, ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] COG3972, Superfamily I DNA and RNA helicases [General function prediction only] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG0653, SecA Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking and secretion] COG3267, ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] COG1702, PhoH Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms] COG2894, MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] |
| psy17388 | 272 | hhsearch probability: 97.74 Identity: 24% subject length: 451 Length of aligned reigon: 49 Coverage over query: 16-64 Coverage over subject: 94-142 |
COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG2046, MET3 ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG4639, Predicted kinase [General function prediction only] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG4185, Uncharacterized protein conserved in bacteria [Function unknown] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG4240, Predicted kinase [General function prediction only] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG1855, ATPase (PilT family) [General function prediction only] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3911, Predicted ATPase [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG0802, Predicted ATPase or kinase [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] |
| psy3261 | 342 | hhsearch probability: 95.37 Identity: 14% subject length: 451 Length of aligned reigon: 145 Coverage over query: 65-263 Coverage over subject: 98-266 |
COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG2607, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG3267, ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG3899, Predicted ATPase [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG3911, Predicted ATPase [General function prediction only] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG4778, PhnL ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] |
| psy14696 | 355 | hhsearch probability: 97.64 Identity: 26% subject length: 451 Length of aligned reigon: 38 Coverage over query: 3-40 Coverage over subject: 91-128 |
COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG4639, Predicted kinase [General function prediction only] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG4185, Uncharacterized protein conserved in bacteria [Function unknown] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1855, ATPase (PilT family) [General function prediction only] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG3911, Predicted ATPase [General function prediction only] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG5324, Uncharacterized conserved protein [Function unknown] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0178, UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] |
| psy3484 | 257 | hhsearch probability: 98.14 Identity: 23% subject length: 451 Length of aligned reigon: 93 Coverage over query: 1-97 Coverage over subject: 101-207 |
COG4639, Predicted kinase [General function prediction only] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG4185, Uncharacterized protein conserved in bacteria [Function unknown] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1855, ATPase (PilT family) [General function prediction only] COG3911, Predicted ATPase [General function prediction only] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG4240, Predicted kinase [General function prediction only] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG5324, Uncharacterized conserved protein [Function unknown] |
| psy673 | 512 | hhsearch probability: 97.51 Identity: 41% subject length: 451 Length of aligned reigon: 44 Coverage over query: 32-75 Coverage over subject: 97-140 |
COG0406, phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only] COG0588, GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism] COG2062, SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms] COG0645, Predicted kinase [General function prediction only] COG4639, Predicted kinase [General function prediction only] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG4185, Uncharacterized protein conserved in bacteria [Function unknown] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG5324, Uncharacterized conserved protein [Function unknown] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1855, ATPase (PilT family) [General function prediction only] |
| psy11347 | 294 | hhsearch probability: 98.94 Identity: 15% subject length: 451 Length of aligned reigon: 150 Coverage over query: 47-228 Coverage over subject: 99-251 |
COG2894, MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] COG1192, Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0489, Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG1348, NifH Nitrogenase subunit NifH (ATPase) [Inorganic ion transport and metabolism] COG0003, ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] COG0132, BioD Dethiobiotin synthetase [Coenzyme metabolism] COG1797, CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1492, CobQ Cobyric acid synthase [Coenzyme metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG0857, Pta BioD-like N-terminal domain of phosphotransacetylase [General function prediction only] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1159, Era GTPase [General function prediction only] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG2403, Predicted GTPase [General function prediction only] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG3367, Uncharacterized conserved protein [Function unknown] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG2109, BtuR ATP:corrinoid adenosyltransferase [Coenzyme metabolism] |
| psy2892 | 452 | hhsearch probability: 97.96 Identity: 12% subject length: 451 Length of aligned reigon: 146 Coverage over query: 212-376 Coverage over subject: 98-251 |
COG0305, DnaB Replicative DNA helicase [DNA replication, recombination, and repair] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG3598, RepA RecA-family ATPase [DNA replication, recombination, and repair] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1435, Tdk Thymidine kinase [Nucleotide transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG2401, ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG1110, Reverse gyrase [DNA replication, recombination, and repair] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG1245, Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG1204, Superfamily II helicase [General function prediction only] COG4674, Uncharacterized ABC-type transport system, ATPase component [General function prediction only] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG2894, MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] COG1084, Predicted GTPase [General function prediction only] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG1129, MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] |
| psy2891 | 452 | hhsearch probability: 97.96 Identity: 12% subject length: 451 Length of aligned reigon: 146 Coverage over query: 212-376 Coverage over subject: 98-251 |
COG0305, DnaB Replicative DNA helicase [DNA replication, recombination, and repair] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG3598, RepA RecA-family ATPase [DNA replication, recombination, and repair] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1435, Tdk Thymidine kinase [Nucleotide transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG2401, ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG1110, Reverse gyrase [DNA replication, recombination, and repair] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG1245, Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG1204, Superfamily II helicase [General function prediction only] COG4674, Uncharacterized ABC-type transport system, ATPase component [General function prediction only] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG2894, MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] COG1084, Predicted GTPase [General function prediction only] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG1129, MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] |
| psy9978 | 226 | hhsearch probability: 96.61 Identity: 19% subject length: 451 Length of aligned reigon: 77 Coverage over query: 138-218 Coverage over subject: 170-250 |
COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] COG2894, MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1192, Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG0003, ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] COG1348, NifH Nitrogenase subunit NifH (ATPase) [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0132, BioD Dethiobiotin synthetase [Coenzyme metabolism] COG0489, Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG1159, Era GTPase [General function prediction only] COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] |
| psy14904 | 233 | hhsearch probability: 99.32 Identity: 19% subject length: 451 Length of aligned reigon: 178 Coverage over query: 6-222 Coverage over subject: 100-288 |
COG0132, BioD Dethiobiotin synthetase [Coenzyme metabolism] COG1797, CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] COG2894, MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] COG0489, Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] COG1192, Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG1492, CobQ Cobyric acid synthase [Coenzyme metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0857, Pta BioD-like N-terminal domain of phosphotransacetylase [General function prediction only] COG1348, NifH Nitrogenase subunit NifH (ATPase) [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0003, ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3367, Uncharacterized conserved protein [Function unknown] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG2403, Predicted GTPase [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG2109, BtuR ATP:corrinoid adenosyltransferase [Coenzyme metabolism] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG4240, Predicted kinase [General function prediction only] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG1435, Tdk Thymidine kinase [Nucleotide transport and metabolism] COG1159, Era GTPase [General function prediction only] COG1855, ATPase (PilT family) [General function prediction only] COG0504, PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1663, LpxK Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG3911, Predicted ATPase [General function prediction only] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG2759, MIS1 Formyltetrahydrofolate synthetase [Nucleotide transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG1110, Reverse gyrase [DNA replication, recombination, and repair] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] |
| psy14655 | 261 | hhsearch probability: 99.01 Identity: 17% subject length: 451 Length of aligned reigon: 138 Coverage over query: 6-172 Coverage over subject: 108-251 |
COG1192, Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG2894, MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] COG0489, Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG1348, NifH Nitrogenase subunit NifH (ATPase) [Inorganic ion transport and metabolism] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG0003, ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0132, BioD Dethiobiotin synthetase [Coenzyme metabolism] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1797, CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG1159, Era GTPase [General function prediction only] COG1492, CobQ Cobyric acid synthase [Coenzyme metabolism] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG3598, RepA RecA-family ATPase [DNA replication, recombination, and repair] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG2109, BtuR ATP:corrinoid adenosyltransferase [Coenzyme metabolism] COG4240, Predicted kinase [General function prediction only] COG5623, CLP1 Predicted GTPase subunit of the pre-mRNA cleavage complex [Translation, ribosomal structure and biogenesis] COG3367, Uncharacterized conserved protein [Function unknown] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG2403, Predicted GTPase [General function prediction only] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG1855, ATPase (PilT family) [General function prediction only] COG1663, LpxK Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG0305, DnaB Replicative DNA helicase [DNA replication, recombination, and repair] COG2759, MIS1 Formyltetrahydrofolate synthetase [Nucleotide transport and metabolism] |
| psy7186 | 135 | hhsearch probability: 99.06 Identity: 21% subject length: 451 Length of aligned reigon: 105 Coverage over query: 1-106 Coverage over subject: 102-220 |
COG4639, Predicted kinase [General function prediction only] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG4185, Uncharacterized protein conserved in bacteria [Function unknown] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG4240, Predicted kinase [General function prediction only] COG3911, Predicted ATPase [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG1855, ATPase (PilT family) [General function prediction only] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG0802, Predicted ATPase or kinase [General function prediction only] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] |
| psy9977 | 192 | hhsearch probability: 99.43 Identity: 21% subject length: 451 Length of aligned reigon: 150 Coverage over query: 5-187 Coverage over subject: 99-252 |
COG0489, Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] COG2894, MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] COG1192, Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG1348, NifH Nitrogenase subunit NifH (ATPase) [Inorganic ion transport and metabolism] COG0003, ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0132, BioD Dethiobiotin synthetase [Coenzyme metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1797, CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] COG1492, CobQ Cobyric acid synthase [Coenzyme metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG2403, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0857, Pta BioD-like N-terminal domain of phosphotransacetylase [General function prediction only] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3367, Uncharacterized conserved protein [Function unknown] COG4240, Predicted kinase [General function prediction only] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG3598, RepA RecA-family ATPase [DNA replication, recombination, and repair] COG0504, PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1663, LpxK Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG2109, BtuR ATP:corrinoid adenosyltransferase [Coenzyme metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1435, Tdk Thymidine kinase [Nucleotide transport and metabolism] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] |
| psy9979 | 65 | hhsearch probability: 98.91 Identity: 27% subject length: 451 Length of aligned reigon: 59 Coverage over query: 5-63 Coverage over subject: 98-157 |
COG1192, Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG0489, Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG2894, MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] COG0003, ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG1348, NifH Nitrogenase subunit NifH (ATPase) [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG4240, Predicted kinase [General function prediction only] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG1855, ATPase (PilT family) [General function prediction only] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0132, BioD Dethiobiotin synthetase [Coenzyme metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1797, CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG2403, Predicted GTPase [General function prediction only] COG3911, Predicted ATPase [General function prediction only] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG5623, CLP1 Predicted GTPase subunit of the pre-mRNA cleavage complex [Translation, ribosomal structure and biogenesis] COG0305, DnaB Replicative DNA helicase [DNA replication, recombination, and repair] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] |
| psy2713 | 143 | hhsearch probability: 99.27 Identity: 23% subject length: 451 Length of aligned reigon: 98 Coverage over query: 3-108 Coverage over subject: 97-202 |
COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG4639, Predicted kinase [General function prediction only] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG4185, Uncharacterized protein conserved in bacteria [Function unknown] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG4240, Predicted kinase [General function prediction only] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1855, ATPase (PilT family) [General function prediction only] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0802, Predicted ATPase or kinase [General function prediction only] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1220, HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3911, Predicted ATPase [General function prediction only] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG0489, Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] |
| psy11993 | 630 | hhsearch probability: 100.00 Identity: 30% subject length: 451 Length of aligned reigon: 289 Coverage over query: 311-630 Coverage over subject: 7-295 |
COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG1137, YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only] COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG4133, CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG4161, ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG4148, ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG4674, Uncharacterized ABC-type transport system, ATPase component [General function prediction only] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4138, BtuD ABC-type cobalamin transport system, ATPase component [Coenzyme metabolism] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG4778, PhnL ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG5265, ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG1129, MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG0489, Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG4170, SapD ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG2401, ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only] COG1245, Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only] COG1192, Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] |
| psy2881 | 302 | hhsearch probability: 100.00 Identity: 38% subject length: 451 Length of aligned reigon: 287 Coverage over query: 5-300 Coverage over subject: 1-295 |
COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG1137, YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG4133, CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG4674, Uncharacterized ABC-type transport system, ATPase component [General function prediction only] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4148, ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG4161, ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG4778, PhnL ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4138, BtuD ABC-type cobalamin transport system, ATPase component [Coenzyme metabolism] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG5265, ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones] COG4170, SapD ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] COG2401, ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only] COG1129, MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] COG1245, Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG3910, Predicted ATPase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0178, UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair] |
| psy4311 | 190 | hhsearch probability: 100.00 Identity: 37% subject length: 451 Length of aligned reigon: 184 Coverage over query: 2-185 Coverage over subject: 1-195 |
COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1129, MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1137, YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG4133, CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG4674, Uncharacterized ABC-type transport system, ATPase component [General function prediction only] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG4240, Predicted kinase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG4138, BtuD ABC-type cobalamin transport system, ATPase component [Coenzyme metabolism] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG4148, ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG4778, PhnL ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] |
| psy4310 | 203 | hhsearch probability: 100.00 Identity: 34% subject length: 451 Length of aligned reigon: 159 Coverage over query: 3-167 Coverage over subject: 275-434 |
COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] |