| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG1098 |
All predicted COG clusters |
|---|---|---|---|
| psy3754 | 755 | hhsearch probability: 94.53 Identity: 15% subject length: 129 Length of aligned reigon: 53 Coverage over query: 640-700 Coverage over subject: 13-67 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG0184, RpsO Ribosomal protein S15P/S13E [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1094, Predicted RNA-binding protein (contains KH domains) [General function prediction only] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] |
| psy9769 | 1026 | hhsearch probability: 98.52 Identity: 16% subject length: 129 Length of aligned reigon: 74 Coverage over query: 644-721 Coverage over subject: 2-79 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG3055, Uncharacterized protein conserved in bacteria [Function unknown] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG2183, Tex Transcriptional accessory protein [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG5201, SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] |
| psy14505 | 1619 | hhsearch probability: 99.32 Identity: 36% subject length: 129 Length of aligned reigon: 80 Coverage over query: 1338-1419 Coverage over subject: 2-81 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0188, GyrA Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit [DNA replication, recombination, and repair] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG0557, VacB Exoribonuclease R [Transcription] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] |
| psy11392 | 169 | hhsearch probability: 98.02 Identity: 18% subject length: 129 Length of aligned reigon: 38 Coverage over query: 65-102 Coverage over subject: 3-41 |
COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| psy3654 | 140 | hhsearch probability: 91.86 Identity: 24% subject length: 129 Length of aligned reigon: 72 Coverage over query: 55-131 Coverage over subject: 5-82 |
COG1278, CspC Cold shock proteins [Transcription] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] |
| psy2573 | 1281 | hhsearch probability: 99.56 Identity: 18% subject length: 129 Length of aligned reigon: 76 Coverage over query: 1188-1266 Coverage over subject: 2-81 |
COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0557, VacB Exoribonuclease R [Transcription] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1094, Predicted RNA-binding protein (contains KH domains) [General function prediction only] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] |
| psy230 | 222 | hhsearch probability: 98.10 Identity: 14% subject length: 129 Length of aligned reigon: 73 Coverage over query: 53-125 Coverage over subject: 2-75 |
COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| psy13107 | 170 | hhsearch probability: 99.11 Identity: 15% subject length: 129 Length of aligned reigon: 68 Coverage over query: 78-158 Coverage over subject: 2-70 |
COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG4776, Rnb Exoribonuclease II [Transcription] |
| psy4846 | 279 | hhsearch probability: 98.37 Identity: 10% subject length: 129 Length of aligned reigon: 68 Coverage over query: 168-249 Coverage over subject: 8-75 |
COG0557, VacB Exoribonuclease R [Transcription] COG4776, Rnb Exoribonuclease II [Transcription] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] |
| psy4856 | 654 | hhsearch probability: 93.31 Identity: 15% subject length: 129 Length of aligned reigon: 39 Coverage over query: 605-647 Coverage over subject: 4-42 |
COG4776, Rnb Exoribonuclease II [Transcription] COG0557, VacB Exoribonuclease R [Transcription] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] |
| psy6276 | 271 | hhsearch probability: 98.30 Identity: 12% subject length: 129 Length of aligned reigon: 74 Coverage over query: 68-151 Coverage over subject: 3-77 |
COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] |
| psy5953 | 2718 | hhsearch probability: 98.33 Identity: 24% subject length: 129 Length of aligned reigon: 62 Coverage over query: 2269-2331 Coverage over subject: 17-78 |
COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG0189, RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1181, DdlA D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane] COG1821, Predicted ATP-utilizing enzyme (ATP-grasp superfamily) [General function prediction only] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG0439, AccC Biotin carboxylase [Lipid metabolism] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] |
| psy10116 | 298 | hhsearch probability: 99.05 Identity: 18% subject length: 129 Length of aligned reigon: 76 Coverage over query: 83-168 Coverage over subject: 2-77 |
COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG2183, Tex Transcriptional accessory protein [Transcription] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] |
| psy11410 | 532 | hhsearch probability: 99.58 Identity: 33% subject length: 129 Length of aligned reigon: 69 Coverage over query: 462-531 Coverage over subject: 2-77 |
COG2183, Tex Transcriptional accessory protein [Transcription] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG4277, Predicted DNA-binding protein with the Helix-hairpin-helix motif [General function prediction only] COG1031, Uncharacterized Fe-S oxidoreductase [Energy production and conversion] |
| psy18072 | 174 | hhsearch probability: 99.77 Identity: 21% subject length: 129 Length of aligned reigon: 73 Coverage over query: 14-88 Coverage over subject: 4-76 |
COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG0557, VacB Exoribonuclease R [Transcription] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] |
| psy11042 | 235 | hhsearch probability: 99.76 Identity: 19% subject length: 129 Length of aligned reigon: 78 Coverage over query: 62-154 Coverage over subject: 5-82 |
COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG3063, PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] |