| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG1187 |
All predicted COG clusters |
|---|---|---|---|
| psy8199 | 965 | hhsearch probability: 99.93 Identity: 21% subject length: 248 Length of aligned reigon: 181 Coverage over query: 2-203 Coverage over subject: 29-212 |
COG0001, HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism] COG4992, ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism] COG0502, BioB Biotin synthase and related enzymes [Coenzyme metabolism] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG0160, GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism] COG1060, ThiH Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only] COG0161, BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism] COG0156, BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism] COG1856, Uncharacterized homolog of biotin synthetase [Function unknown] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0436, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] COG0079, HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism] COG1104, NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism] COG1168, MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism] COG1242, Predicted Fe-S oxidoreductase [General function prediction only] COG0621, MiaB 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis] COG0520, csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones] COG0320, LipA Lipoate synthase [Coenzyme metabolism] COG2008, GLY1 Threonine aldolase [Amino acid transport and metabolism] COG1167, ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism] COG2896, MoaA Molybdenum cofactor biosynthesis enzyme [Coenzyme metabolism] COG0635, HemN Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism] COG1243, ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics] COG1032, Fe-S oxidoreductase [Energy production and conversion] COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism] COG2100, Predicted Fe-S oxidoreductase [General function prediction only] COG2516, Biotin synthase-related enzyme [General function prediction only] COG1031, Uncharacterized Fe-S oxidoreductase [Energy production and conversion] COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism] COG4277, Predicted DNA-binding protein with the Helix-hairpin-helix motif [General function prediction only] COG1180, PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones] COG0399, WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane] COG2108, Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme [General function prediction only] |
| psy1176 | 232 | hhsearch probability: 97.32 Identity: 20% subject length: 248 Length of aligned reigon: 157 Coverage over query: 34-225 Coverage over subject: 65-244 |
COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG1258, Predicted pseudouridylate synthase [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] |
| psy8861 | 550 | hhsearch probability: 97.50 Identity: 26% subject length: 248 Length of aligned reigon: 54 Coverage over query: 96-150 Coverage over subject: 2-56 |
COG0202, RpoA DNA-directed RNA polymerase, alpha subunit/40 kD subunit [Transcription] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG0203, RplQ Ribosomal protein L17 [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1761, RPB11 DNA-directed RNA polymerase, subunit L [Transcription] |
| psy938 | 241 | hhsearch probability: 97.32 Identity: 24% subject length: 248 Length of aligned reigon: 46 Coverage over query: 146-192 Coverage over subject: 2-47 |
COG0162, TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0180, TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0060, IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0525, ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0215, CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0143, MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] |
| psy7990 | 76 | hhsearch probability: 92.54 Identity: 18% subject length: 248 Length of aligned reigon: 33 Coverage over query: 3-35 Coverage over subject: 15-47 |
COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] |
| psy9397 | 526 | hhsearch probability: 99.98 Identity: 23% subject length: 248 Length of aligned reigon: 214 Coverage over query: 27-272 Coverage over subject: 2-222 |
COG0616, SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1024, CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] COG0740, ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] COG1030, NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones] COG0447, MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0825, AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0777, AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG3904, Predicted periplasmic protein [Function unknown] |
| psy8661 | 71 | hhsearch probability: 93.03 Identity: 24% subject length: 248 Length of aligned reigon: 29 Coverage over query: 34-63 Coverage over subject: 12-40 |
COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] |
| psy11090 | 412 | hhsearch probability: 99.73 Identity: 18% subject length: 248 Length of aligned reigon: 156 Coverage over query: 81-287 Coverage over subject: 57-213 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |
| psy8191 | 257 | hhsearch probability: 99.84 Identity: 24% subject length: 248 Length of aligned reigon: 149 Coverage over query: 35-201 Coverage over subject: 62-210 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |
| psy10873 | 198 | hhsearch probability: 99.95 Identity: 18% subject length: 248 Length of aligned reigon: 146 Coverage over query: 3-178 Coverage over subject: 65-213 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |