| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG1188 |
All predicted COG clusters |
|---|---|---|---|
| psy9397 | 526 | hhsearch probability: 98.44 Identity: 22% subject length: 100 Length of aligned reigon: 55 Coverage over query: 25-79 Coverage over subject: 6-60 |
COG0616, SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1024, CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] COG0740, ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] COG1030, NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones] COG0447, MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0825, AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0777, AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG3904, Predicted periplasmic protein [Function unknown] |
| psy938 | 241 | hhsearch probability: 96.89 Identity: 17% subject length: 100 Length of aligned reigon: 60 Coverage over query: 146-212 Coverage over subject: 8-67 |
COG0162, TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0180, TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0060, IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0525, ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0215, CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0143, MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] |
| psy8861 | 550 | hhsearch probability: 99.11 Identity: 28% subject length: 100 Length of aligned reigon: 57 Coverage over query: 95-152 Coverage over subject: 7-63 |
COG0202, RpoA DNA-directed RNA polymerase, alpha subunit/40 kD subunit [Transcription] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG0203, RplQ Ribosomal protein L17 [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1761, RPB11 DNA-directed RNA polymerase, subunit L [Transcription] |
| psy7990 | 76 | hhsearch probability: 97.36 Identity: 23% subject length: 100 Length of aligned reigon: 39 Coverage over query: 4-43 Coverage over subject: 23-61 |
COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] |
| psy13908 | 149 | hhsearch probability: 97.04 Identity: 20% subject length: 100 Length of aligned reigon: 40 Coverage over query: 107-147 Coverage over subject: 8-47 |
COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0162, TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] |
| psy4238 | 67 | hhsearch probability: 92.89 Identity: 24% subject length: 100 Length of aligned reigon: 29 Coverage over query: 4-33 Coverage over subject: 32-60 |
COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] |