| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG1321 |
All predicted COG clusters |
|---|---|---|---|
| psy5033 | 242 | hhsearch probability: 93.54 Identity: 20% subject length: 154 Length of aligned reigon: 106 Coverage over query: 13-121 Coverage over subject: 12-130 |
COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1725, Predicted transcriptional regulators [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG2522, Predicted transcriptional regulator [General function prediction only] COG1342, Predicted DNA-binding proteins [General function prediction only] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG2973, TrpR Trp operon repressor [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG4189, Predicted transcriptional regulator [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG1414, IclR Transcriptional regulator [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1378, Predicted transcriptional regulators [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1609, PurR Transcriptional regulators [Transcription] COG5566, Uncharacterized conserved protein [Function unknown] COG1318, Predicted transcriptional regulators [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] COG2188, PhnF Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1961, PinR Site-specific recombinases, DNA invertase Pin homologs [DNA replication, recombination, and repair] COG0856, Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism] COG5352, Uncharacterized protein conserved in bacteria [Function unknown] |
| psy15598 | 258 | hhsearch probability: 93.79 Identity: 26% subject length: 154 Length of aligned reigon: 101 Coverage over query: 52-160 Coverage over subject: 11-123 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1725, Predicted transcriptional regulators [Transcription] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG2345, Predicted transcriptional regulator [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1802, GntR Transcriptional regulators [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] COG2207, AraC AraC-type DNA-binding domain-containing proteins [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG1476, Predicted transcriptional regulators [Transcription] |
| psy10582 | 173 | hhsearch probability: 95.19 Identity: 17% subject length: 154 Length of aligned reigon: 120 Coverage over query: 33-167 Coverage over subject: 9-131 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG2345, Predicted transcriptional regulator [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1725, Predicted transcriptional regulators [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG1654, BirA Biotin operon repressor [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG2944, Predicted transcriptional regulator [Transcription] COG1609, PurR Transcriptional regulators [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1522, Lrp Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG5352, Uncharacterized protein conserved in bacteria [Function unknown] COG1438, ArgR Arginine repressor [Transcription] COG1802, GntR Transcriptional regulators [Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2186, FadR Transcriptional regulators [Transcription] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG2188, PhnF Transcriptional regulators [Transcription] COG1414, IclR Transcriptional regulator [Transcription] |
| psy17446 | 235 | hhsearch probability: 95.61 Identity: 14% subject length: 154 Length of aligned reigon: 103 Coverage over query: 30-135 Coverage over subject: 13-127 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG5352, Uncharacterized protein conserved in bacteria [Function unknown] COG1414, IclR Transcriptional regulator [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG1609, PurR Transcriptional regulators [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG4189, Predicted transcriptional regulator [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG1378, Predicted transcriptional regulators [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG1802, GntR Transcriptional regulators [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2973, TrpR Trp operon repressor [Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG1522, Lrp Transcriptional regulators [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG1318, Predicted transcriptional regulators [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] |
| psy2383 | 391 | hhsearch probability: 92.71 Identity: 23% subject length: 154 Length of aligned reigon: 53 Coverage over query: 333-385 Coverage over subject: 23-76 |
COG0635, HemN Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism] COG0621, MiaB 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis] COG1243, ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics] COG1242, Predicted Fe-S oxidoreductase [General function prediction only] COG1032, Fe-S oxidoreductase [Energy production and conversion] COG0502, BioB Biotin synthase and related enzymes [Coenzyme metabolism] COG1244, Predicted Fe-S oxidoreductase [General function prediction only] COG1031, Uncharacterized Fe-S oxidoreductase [Energy production and conversion] COG2896, MoaA Molybdenum cofactor biosynthesis enzyme [Coenzyme metabolism] COG1060, ThiH Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only] COG2100, Predicted Fe-S oxidoreductase [General function prediction only] COG2516, Biotin synthase-related enzyme [General function prediction only] COG1856, Uncharacterized homolog of biotin synthetase [Function unknown] COG0535, Predicted Fe-S oxidoreductases [General function prediction only] COG0641, AslB Arylsulfatase regulator (Fe-S oxidoreductase) [General function prediction only] COG0320, LipA Lipoate synthase [Coenzyme metabolism] COG0731, Fe-S oxidoreductases [Energy production and conversion] COG1180, PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones] COG1625, Fe-S oxidoreductase, related to NifB/MoaA family [Energy production and conversion] COG1533, SplB DNA repair photolyase [DNA replication, recombination, and repair] COG4277, Predicted DNA-binding protein with the Helix-hairpin-helix motif [General function prediction only] COG0820, Predicted Fe-S-cluster redox enzyme [General function prediction only] COG1509, KamA Lysine 2,3-aminomutase [Amino acid transport and metabolism] COG2108, Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme [General function prediction only] COG5014, Predicted Fe-S oxidoreductase [General function prediction only] COG0602, NrdG Organic radical activating enzymes [Posttranslational modification, protein turnover, chaperones] COG1313, PflX Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins [General function prediction only] COG1964, Predicted Fe-S oxidoreductases [General function prediction only] COG1809, (2R)-phospho-3-sulfolactate synthase (PSL synthase, CoM biosynthesis) [Coenzyme transport and metabolism] COG2238, RPS19A Ribosomal protein S19E (S16A) [Translation, ribosomal structure and biogenesis] COG4742, Predicted transcriptional regulator [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG4754, Uncharacterized conserved protein [Function unknown] COG3432, Predicted transcriptional regulator [Transcription] |
| psy1904 | 163 | hhsearch probability: 91.90 Identity: 29% subject length: 154 Length of aligned reigon: 38 Coverage over query: 6-43 Coverage over subject: 25-62 |
COG5576, Homeodomain-containing transcription factor [Transcription] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2522, Predicted transcriptional regulator [General function prediction only] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3620, Predicted transcriptional regulator with C-terminal CBS domains [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] |
| psy9016 | 104 | hhsearch probability: 91.68 Identity: 10% subject length: 154 Length of aligned reigon: 42 Coverage over query: 49-90 Coverage over subject: 12-55 |
COG1522, Lrp Transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1414, IclR Transcriptional regulator [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1737, RpiR Transcriptional regulators [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG3283, TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] COG1510, Predicted transcriptional regulators [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1309, AcrR Transcriptional regulator [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1654, BirA Biotin operon repressor [Transcription] |
| psy15513 | 77 | hhsearch probability: 96.52 Identity: 30% subject length: 154 Length of aligned reigon: 37 Coverage over query: 6-42 Coverage over subject: 25-61 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2944, Predicted transcriptional regulator [Transcription] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG1959, Predicted transcriptional regulator [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1846, MarR Transcriptional regulators [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG5484, Uncharacterized conserved protein [Function unknown] COG1414, IclR Transcriptional regulator [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG1802, GntR Transcriptional regulators [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG1339, Transcriptional regulator of a riboflavin/FAD biosynthetic operon [Transcription / Coenzyme metabolism] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1609, PurR Transcriptional regulators [Transcription] COG1737, RpiR Transcriptional regulators [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG2188, PhnF Transcriptional regulators [Transcription] |
| psy3760 | 306 | hhsearch probability: 97.55 Identity: 19% subject length: 154 Length of aligned reigon: 62 Coverage over query: 19-83 Coverage over subject: 27-88 |
COG0583, LysR Transcriptional regulator [Transcription] COG2005, ModE N-terminal domain of molybdenum-binding protein [General function prediction only] COG2998, TupB ABC-type tungstate transport system, permease component [Coenzyme metabolism] COG0725, ModA ABC-type molybdate transport system, periplasmic component [Inorganic ion transport and metabolism] COG1910, Periplasmic molybdate-binding protein/domain [Inorganic ion transport and metabolism] COG0226, PstS ABC-type phosphate transport system, periplasmic component [Inorganic ion transport and metabolism] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG4742, Predicted transcriptional regulator [Transcription] COG2358, Imp TRAP-type uncharacterized transport system, periplasmic component [General function prediction only] COG1339, Transcriptional regulator of a riboflavin/FAD biosynthetic operon [Transcription / Coenzyme metabolism] COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein [Cell envelope biogenesis, outer membrane] COG0715, TauA ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1733, Predicted transcriptional regulators [Transcription] COG1609, PurR Transcriptional regulators [Transcription] COG3888, Predicted transcriptional regulator [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism] COG0834, HisJ ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] COG1732, OpuBC Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) [Cell envelope biogenesis, outer membrane] COG4190, Predicted transcriptional regulator [Transcription] COG0040, HisG ATP phosphoribosyltransferase [Amino acid transport and metabolism] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG3221, PhnD ABC-type phosphate/phosphonate transport system, periplasmic component [Inorganic ion transport and metabolism] COG4189, Predicted transcriptional regulator [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG0181, HemC Porphobilinogen deaminase [Coenzyme metabolism] COG1497, Predicted transcriptional regulator [Transcription] COG4197, Uncharacterized protein conserved in bacteria, prophage-related [Function unknown] COG1464, NlpA ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism] COG3355, Predicted transcriptional regulator [Transcription] COG1414, IclR Transcriptional regulator [Transcription] |
| psy262 | 127 | hhsearch probability: 97.22 Identity: 17% subject length: 154 Length of aligned reigon: 101 Coverage over query: 20-123 Coverage over subject: 14-126 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG2345, Predicted transcriptional regulator [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2207, AraC AraC-type DNA-binding domain-containing proteins [Transcription] COG1414, IclR Transcriptional regulator [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG1378, Predicted transcriptional regulators [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG4189, Predicted transcriptional regulator [Transcription] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1802, GntR Transcriptional regulators [Transcription] |
| psy5506 | 257 | hhsearch probability: 93.77 Identity: 25% subject length: 154 Length of aligned reigon: 57 Coverage over query: 64-120 Coverage over subject: 11-70 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG3355, Predicted transcriptional regulator [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1737, RpiR Transcriptional regulators [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG2169, Ada Adenosine deaminase [Nucleotide transport and metabolism] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| psy5744 | 157 | hhsearch probability: 94.10 Identity: 17% subject length: 154 Length of aligned reigon: 41 Coverage over query: 39-79 Coverage over subject: 18-58 |
COG1675, TFA1 Transcription initiation factor IIE, alpha subunit [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1959, Predicted transcriptional regulator [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG1378, Predicted transcriptional regulators [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG5625, Predicted transcription regulator containing HTH domain [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1414, IclR Transcriptional regulator [Transcription] COG1802, GntR Transcriptional regulators [Transcription] COG1777, Predicted transcriptional regulators [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG4190, Predicted transcriptional regulator [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG0640, ArsR Predicted transcriptional regulators [Transcription] COG4189, Predicted transcriptional regulator [Transcription] COG2901, Fis Factor for inversion stimulation Fis, transcriptional activator [Transcription / DNA replication, recombination, and repair] COG1510, Predicted transcriptional regulators [Transcription] |
| psy15954 | 81 | hhsearch probability: 95.67 Identity: 18% subject length: 154 Length of aligned reigon: 45 Coverage over query: 3-47 Coverage over subject: 21-68 |
COG1522, Lrp Transcriptional regulators [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG3355, Predicted transcriptional regulator [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1654, BirA Biotin operon repressor [Transcription] COG1737, RpiR Transcriptional regulators [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1414, IclR Transcriptional regulator [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2207, AraC AraC-type DNA-binding domain-containing proteins [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG3283, TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] COG1609, PurR Transcriptional regulators [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1309, AcrR Transcriptional regulator [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG3877, Uncharacterized protein conserved in bacteria [Function unknown] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |
| psy1871 | 139 | hhsearch probability: 90.53 Identity: 18% subject length: 154 Length of aligned reigon: 50 Coverage over query: 71-120 Coverage over subject: 9-58 |
COG4901, Ribosomal protein S25 [Translation, ribosomal structure and biogenesis] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1522, Lrp Transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG4465, CodY Pleiotropic transcriptional repressor [Transcription] COG1802, GntR Transcriptional regulators [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG1959, Predicted transcriptional regulator [Transcription] |
| psy7778 | 117 | hhsearch probability: 92.05 Identity: 21% subject length: 154 Length of aligned reigon: 52 Coverage over query: 34-89 Coverage over subject: 14-65 |
COG5111, RPC34 DNA-directed RNA polymerase III, subunit C34 [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG1959, Predicted transcriptional regulator [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG1378, Predicted transcriptional regulators [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] |
| psy5605 | 152 | hhsearch probability: 92.71 Identity: 21% subject length: 154 Length of aligned reigon: 53 Coverage over query: 56-122 Coverage over subject: 22-74 |
COG2238, RPS19A Ribosomal protein S19E (S16A) [Translation, ribosomal structure and biogenesis] COG3388, Predicted transcriptional regulator [Transcription] COG1420, HrcA Transcriptional regulator of heat shock gene [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG3432, Predicted transcriptional regulator [Transcription] COG1693, Repressor of nif and glnA expression [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1802, GntR Transcriptional regulators [Transcription] |
| psy11565 | 181 | hhsearch probability: 96.95 Identity: 14% subject length: 154 Length of aligned reigon: 104 Coverage over query: 21-134 Coverage over subject: 12-131 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2522, Predicted transcriptional regulator [General function prediction only] COG3355, Predicted transcriptional regulator [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG1414, IclR Transcriptional regulator [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1802, GntR Transcriptional regulators [Transcription] COG5566, Uncharacterized conserved protein [Function unknown] COG4109, Predicted transcriptional regulator containing CBS domains [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG1737, RpiR Transcriptional regulators [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] |
| psy10346 | 292 | hhsearch probability: 95.81 Identity: 24% subject length: 154 Length of aligned reigon: 59 Coverage over query: 9-70 Coverage over subject: 15-73 |
COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG1846, MarR Transcriptional regulators [Transcription] COG1497, Predicted transcriptional regulator [Transcription] COG4754, Uncharacterized conserved protein [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1695, Predicted transcriptional regulators [Transcription] COG1733, Predicted transcriptional regulators [Transcription] COG4742, Predicted transcriptional regulator [Transcription] COG3432, Predicted transcriptional regulator [Transcription] COG5045, Ribosomal protein S10E [Translation, ribosomal structure and biogenesis] COG2024, Phenylalanyl-tRNA synthetase alpha subunit (archaeal type) [Translation, ribosomal structure and biogenesis] COG1522, Lrp Transcriptional regulators [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG1339, Transcriptional regulator of a riboflavin/FAD biosynthetic operon [Transcription / Coenzyme metabolism] COG2524, Predicted transcriptional regulator, contains C-terminal CBS domains [Transcription] |