| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG1342 |
All predicted COG clusters |
|---|---|---|---|
| psy17446 | 235 | hhsearch probability: 92.29 Identity: 35% subject length: 99 Length of aligned reigon: 40 Coverage over query: 24-64 Coverage over subject: 34-74 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG5352, Uncharacterized protein conserved in bacteria [Function unknown] COG1414, IclR Transcriptional regulator [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG1609, PurR Transcriptional regulators [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG4189, Predicted transcriptional regulator [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG1378, Predicted transcriptional regulators [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG1802, GntR Transcriptional regulators [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2973, TrpR Trp operon repressor [Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG1522, Lrp Transcriptional regulators [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG1318, Predicted transcriptional regulators [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] |
| psy15215 | 1432 | hhsearch probability: 94.36 Identity: 23% subject length: 99 Length of aligned reigon: 48 Coverage over query: 1367-1418 Coverage over subject: 34-81 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG0358, DnaG DNA primase (bacterial type) [DNA replication, recombination, and repair] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair] |
| psy15513 | 77 | hhsearch probability: 95.53 Identity: 10% subject length: 99 Length of aligned reigon: 29 Coverage over query: 4-32 Coverage over subject: 48-76 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2944, Predicted transcriptional regulator [Transcription] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG1959, Predicted transcriptional regulator [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1846, MarR Transcriptional regulators [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG5484, Uncharacterized conserved protein [Function unknown] COG1414, IclR Transcriptional regulator [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG1802, GntR Transcriptional regulators [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG1339, Transcriptional regulator of a riboflavin/FAD biosynthetic operon [Transcription / Coenzyme metabolism] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1609, PurR Transcriptional regulators [Transcription] COG1737, RpiR Transcriptional regulators [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG2188, PhnF Transcriptional regulators [Transcription] |
| psy5033 | 242 | hhsearch probability: 95.55 Identity: 21% subject length: 99 Length of aligned reigon: 42 Coverage over query: 6-47 Coverage over subject: 33-74 |
COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1725, Predicted transcriptional regulators [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG2522, Predicted transcriptional regulator [General function prediction only] COG1342, Predicted DNA-binding proteins [General function prediction only] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG2973, TrpR Trp operon repressor [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG4189, Predicted transcriptional regulator [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG1414, IclR Transcriptional regulator [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1378, Predicted transcriptional regulators [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1609, PurR Transcriptional regulators [Transcription] COG5566, Uncharacterized conserved protein [Function unknown] COG1318, Predicted transcriptional regulators [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] COG2188, PhnF Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1961, PinR Site-specific recombinases, DNA invertase Pin homologs [DNA replication, recombination, and repair] COG0856, Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism] COG5352, Uncharacterized protein conserved in bacteria [Function unknown] |
| psy3760 | 306 | hhsearch probability: 95.77 Identity: 10% subject length: 99 Length of aligned reigon: 50 Coverage over query: 1-50 Coverage over subject: 34-83 |
COG0583, LysR Transcriptional regulator [Transcription] COG2005, ModE N-terminal domain of molybdenum-binding protein [General function prediction only] COG2998, TupB ABC-type tungstate transport system, permease component [Coenzyme metabolism] COG0725, ModA ABC-type molybdate transport system, periplasmic component [Inorganic ion transport and metabolism] COG1910, Periplasmic molybdate-binding protein/domain [Inorganic ion transport and metabolism] COG0226, PstS ABC-type phosphate transport system, periplasmic component [Inorganic ion transport and metabolism] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG4742, Predicted transcriptional regulator [Transcription] COG2358, Imp TRAP-type uncharacterized transport system, periplasmic component [General function prediction only] COG1339, Transcriptional regulator of a riboflavin/FAD biosynthetic operon [Transcription / Coenzyme metabolism] COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein [Cell envelope biogenesis, outer membrane] COG0715, TauA ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1733, Predicted transcriptional regulators [Transcription] COG1609, PurR Transcriptional regulators [Transcription] COG3888, Predicted transcriptional regulator [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism] COG0834, HisJ ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] COG1732, OpuBC Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) [Cell envelope biogenesis, outer membrane] COG4190, Predicted transcriptional regulator [Transcription] COG0040, HisG ATP phosphoribosyltransferase [Amino acid transport and metabolism] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG3221, PhnD ABC-type phosphate/phosphonate transport system, periplasmic component [Inorganic ion transport and metabolism] COG4189, Predicted transcriptional regulator [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG0181, HemC Porphobilinogen deaminase [Coenzyme metabolism] COG1497, Predicted transcriptional regulator [Transcription] COG4197, Uncharacterized protein conserved in bacteria, prophage-related [Function unknown] COG1464, NlpA ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism] COG3355, Predicted transcriptional regulator [Transcription] COG1414, IclR Transcriptional regulator [Transcription] |
| psy1904 | 163 | hhsearch probability: 90.63 Identity: 11% subject length: 99 Length of aligned reigon: 27 Coverage over query: 4-30 Coverage over subject: 48-74 |
COG5576, Homeodomain-containing transcription factor [Transcription] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2522, Predicted transcriptional regulator [General function prediction only] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3620, Predicted transcriptional regulator with C-terminal CBS domains [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] |
| psy3776 | 397 | hhsearch probability: 92.60 Identity: 19% subject length: 99 Length of aligned reigon: 31 Coverage over query: 362-396 Coverage over subject: 33-63 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1502, Cls Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism] COG3886, Predicted HKD family nuclease [DNA replication, recombination, and repair] COG0855, Ppk Polyphosphate kinase [Inorganic ion transport and metabolism] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] |
| psy17316 | 229 | hhsearch probability: 94.83 Identity: 24% subject length: 99 Length of aligned reigon: 38 Coverage over query: 34-72 Coverage over subject: 35-72 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG1342, Predicted DNA-binding proteins [General function prediction only] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG5484, Uncharacterized conserved protein [Function unknown] COG2207, AraC AraC-type DNA-binding domain-containing proteins [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG2901, Fis Factor for inversion stimulation Fis, transcriptional activator [Transcription / DNA replication, recombination, and repair] COG2973, TrpR Trp operon repressor [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] |
| psy9016 | 104 | hhsearch probability: 90.62 Identity: 14% subject length: 99 Length of aligned reigon: 29 Coverage over query: 57-85 Coverage over subject: 45-73 |
COG1522, Lrp Transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1414, IclR Transcriptional regulator [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1737, RpiR Transcriptional regulators [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG3283, TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] COG1510, Predicted transcriptional regulators [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1309, AcrR Transcriptional regulator [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1654, BirA Biotin operon repressor [Transcription] |
| psy6501 | 174 | hhsearch probability: 94.51 Identity: 19% subject length: 99 Length of aligned reigon: 43 Coverage over query: 34-84 Coverage over subject: 39-81 |
COG1813, Predicted transcription factor, homolog of eukaryotic MBF1 [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG3620, Predicted transcriptional regulator with C-terminal CBS domains [Transcription] COG1709, Predicted transcriptional regulator [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG1426, Predicted transcriptional regulator contains Xre-like HTH domain [Function unknown] COG1396, HipB Predicted transcriptional regulators [Transcription] COG1395, Predicted transcriptional regulator [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] COG5606, Uncharacterized conserved small protein [Function unknown] COG3423, Nlp Predicted transcriptional regulator [Transcription] COG3655, Predicted transcriptional regulator [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG3636, Predicted transcriptional regulator [Transcription] COG4197, Uncharacterized protein conserved in bacteria, prophage-related [Function unknown] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG4800, Predicted transcriptional regulator with an HTH domain [Transcription] COG2842, Uncharacterized ATPase, putative transposase [General function prediction only] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG5499, Predicted transcription regulator containing HTH domain [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1609, PurR Transcriptional regulators [Transcription] COG1513, CynS Cyanate lyase [Inorganic ion transport and metabolism] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG2973, TrpR Trp operon repressor [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] |
| psy15954 | 81 | hhsearch probability: 94.27 Identity: 30% subject length: 99 Length of aligned reigon: 23 Coverage over query: 7-29 Coverage over subject: 50-72 |
COG1522, Lrp Transcriptional regulators [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG3355, Predicted transcriptional regulator [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1654, BirA Biotin operon repressor [Transcription] COG1737, RpiR Transcriptional regulators [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1414, IclR Transcriptional regulator [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2207, AraC AraC-type DNA-binding domain-containing proteins [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG3283, TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] COG1609, PurR Transcriptional regulators [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1309, AcrR Transcriptional regulator [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG3877, Uncharacterized protein conserved in bacteria [Function unknown] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |
| psy13727 | 218 | hhsearch probability: 91.72 Identity: 19% subject length: 99 Length of aligned reigon: 32 Coverage over query: 26-57 Coverage over subject: 40-72 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2522, Predicted transcriptional regulator [General function prediction only] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG4800, Predicted transcriptional regulator with an HTH domain [Transcription] |
| psy18214 | 151 | hhsearch probability: 93.47 Identity: 30% subject length: 99 Length of aligned reigon: 37 Coverage over query: 55-91 Coverage over subject: 39-75 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG3423, Nlp Predicted transcriptional regulator [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG1309, AcrR Transcriptional regulator [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG4800, Predicted transcriptional regulator with an HTH domain [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism] |
| psy3580 | 217 | hhsearch probability: 94.49 Identity: 30% subject length: 99 Length of aligned reigon: 33 Coverage over query: 10-42 Coverage over subject: 39-72 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2944, Predicted transcriptional regulator [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG4800, Predicted transcriptional regulator with an HTH domain [Transcription] COG2973, TrpR Trp operon repressor [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1476, Predicted transcriptional regulators [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2345, Predicted transcriptional regulator [Transcription] |
| psy16048 | 104 | hhsearch probability: 95.97 Identity: 19% subject length: 99 Length of aligned reigon: 36 Coverage over query: 18-53 Coverage over subject: 39-74 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1309, AcrR Transcriptional regulator [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG3413, Predicted DNA binding protein [General function prediction only] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG4800, Predicted transcriptional regulator with an HTH domain [Transcription] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3423, Nlp Predicted transcriptional regulator [Transcription] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] COG1522, Lrp Transcriptional regulators [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2378, Predicted transcriptional regulator [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG2186, FadR Transcriptional regulators [Transcription] COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism] COG1414, IclR Transcriptional regulator [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG3355, Predicted transcriptional regulator [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] |
| psy13117 | 233 | hhsearch probability: 95.06 Identity: 29% subject length: 99 Length of aligned reigon: 35 Coverage over query: 3-37 Coverage over subject: 40-75 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2522, Predicted transcriptional regulator [General function prediction only] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1522, Lrp Transcriptional regulators [Transcription] |
| psy12434 | 112 | hhsearch probability: 95.70 Identity: 16% subject length: 99 Length of aligned reigon: 37 Coverage over query: 48-84 Coverage over subject: 39-75 |
COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG1522, Lrp Transcriptional regulators [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] COG3423, Nlp Predicted transcriptional regulator [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] COG3311, AlpA Predicted transcriptional regulator [Transcription] |