| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG1555 |
All predicted COG clusters |
|---|---|---|---|
| psy15878 | 693 | hhsearch probability: 93.83 Identity: 16% subject length: 149 Length of aligned reigon: 49 Coverage over query: 602-659 Coverage over subject: 93-146 |
COG4581, Superfamily II RNA helicase [DNA replication, recombination, and repair] COG1204, Superfamily II helicase [General function prediction only] COG1202, Superfamily II helicase, archaea-specific [General function prediction only] COG0513, SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] COG1201, Lhr Lhr-like helicases [General function prediction only] COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] COG0514, RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair] COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG1197, Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription] COG4098, comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG1110, Reverse gyrase [DNA replication, recombination, and repair] COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG4889, Predicted helicase [General function prediction only] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG0553, HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair] COG3743, Uncharacterized conserved protein [Function unknown] COG0653, SecA Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking and secretion] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG2251, Predicted nuclease (RecB family) [General function prediction only] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG0177, Nth Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair] COG1623, Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only] |
| psy5953 | 2718 | hhsearch probability: 93.89 Identity: 17% subject length: 149 Length of aligned reigon: 48 Coverage over query: 2024-2072 Coverage over subject: 101-148 |
COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG0189, RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1181, DdlA D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane] COG1821, Predicted ATP-utilizing enzyme (ATP-grasp superfamily) [General function prediction only] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG0439, AccC Biotin carboxylase [Lipid metabolism] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] |
| psy11423 | 655 | hhsearch probability: 90.17 Identity: 18% subject length: 149 Length of aligned reigon: 56 Coverage over query: 485-542 Coverage over subject: 91-146 |
COG5275, BRCT domain type II [General function prediction only] COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair] COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair] COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG1623, Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only] COG2003, RadC DNA repair proteins [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG0177, Nth Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] |
| psy11421 | 687 | hhsearch probability: 92.39 Identity: 21% subject length: 149 Length of aligned reigon: 58 Coverage over query: 484-575 Coverage over subject: 90-147 |
COG5275, BRCT domain type II [General function prediction only] COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair] COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair] COG2003, RadC DNA repair proteins [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG1623, Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG0177, Nth Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair] |
| psy11422 | 687 | hhsearch probability: 92.39 Identity: 21% subject length: 149 Length of aligned reigon: 58 Coverage over query: 484-575 Coverage over subject: 90-147 |
COG5275, BRCT domain type II [General function prediction only] COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair] COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair] COG2003, RadC DNA repair proteins [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG1623, Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG0177, Nth Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair] |
| psy15377 | 117 | hhsearch probability: 93.94 Identity: 24% subject length: 149 Length of aligned reigon: 29 Coverage over query: 64-92 Coverage over subject: 87-115 |
COG1623, Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only] COG2003, RadC DNA repair proteins [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5241, RAD10 Nucleotide excision repair endonuclease NEF1, RAD10 subunit [DNA replication, recombination, and repair] COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] |
| psy2052 | 461 | hhsearch probability: 92.75 Identity: 30% subject length: 149 Length of aligned reigon: 50 Coverage over query: 44-97 Coverage over subject: 91-144 |
COG0553, HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG4646, DNA methylase [Transcription / DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG4889, Predicted helicase [General function prediction only] |
| psy9396 | 1149 | hhsearch probability: 96.38 Identity: 31% subject length: 149 Length of aligned reigon: 45 Coverage over query: 835-882 Coverage over subject: 99-144 |
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only] COG1387, HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only] COG1379, PHP family phosphoesterase with a Zn ribbon [General function prediction only] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG1491, Predicted RNA-binding protein [Translation, ribosomal structure and biogenesis] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] |
| psy12068 | 498 | hhsearch probability: 96.63 Identity: 31% subject length: 149 Length of aligned reigon: 49 Coverage over query: 36-95 Coverage over subject: 97-145 |
COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] |
| psy11410 | 532 | hhsearch probability: 99.55 Identity: 30% subject length: 149 Length of aligned reigon: 113 Coverage over query: 182-320 Coverage over subject: 37-149 |
COG2183, Tex Transcriptional accessory protein [Transcription] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG4277, Predicted DNA-binding protein with the Helix-hairpin-helix motif [General function prediction only] COG1031, Uncharacterized Fe-S oxidoreductase [Energy production and conversion] |
| psy9083 | 224 | hhsearch probability: 97.66 Identity: 24% subject length: 149 Length of aligned reigon: 54 Coverage over query: 64-145 Coverage over subject: 94-147 |
COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] |