| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG1595 |
All predicted COG clusters |
|---|---|---|---|
| psy15954 | 81 | hhsearch probability: 90.18 Identity: 32% subject length: 182 Length of aligned reigon: 22 Coverage over query: 7-28 Coverage over subject: 144-165 |
COG1522, Lrp Transcriptional regulators [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG3355, Predicted transcriptional regulator [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1654, BirA Biotin operon repressor [Transcription] COG1737, RpiR Transcriptional regulators [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1414, IclR Transcriptional regulator [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2207, AraC AraC-type DNA-binding domain-containing proteins [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG3283, TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] COG1609, PurR Transcriptional regulators [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1309, AcrR Transcriptional regulator [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG3877, Uncharacterized protein conserved in bacteria [Function unknown] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |
| psy4140 | 337 | hhsearch probability: 92.81 Identity: 23% subject length: 182 Length of aligned reigon: 43 Coverage over query: 195-237 Coverage over subject: 127-169 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG3355, Predicted transcriptional regulator [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1378, Predicted transcriptional regulators [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] |
| psy16048 | 104 | hhsearch probability: 92.42 Identity: 19% subject length: 182 Length of aligned reigon: 31 Coverage over query: 23-53 Coverage over subject: 138-168 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1309, AcrR Transcriptional regulator [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG3413, Predicted DNA binding protein [General function prediction only] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG4800, Predicted transcriptional regulator with an HTH domain [Transcription] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3423, Nlp Predicted transcriptional regulator [Transcription] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] COG1522, Lrp Transcriptional regulators [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2378, Predicted transcriptional regulator [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG2186, FadR Transcriptional regulators [Transcription] COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism] COG1414, IclR Transcriptional regulator [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG3355, Predicted transcriptional regulator [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] |
| psy15513 | 77 | hhsearch probability: 95.94 Identity: 28% subject length: 182 Length of aligned reigon: 29 Coverage over query: 4-32 Coverage over subject: 142-170 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2944, Predicted transcriptional regulator [Transcription] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG1959, Predicted transcriptional regulator [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1846, MarR Transcriptional regulators [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG5484, Uncharacterized conserved protein [Function unknown] COG1414, IclR Transcriptional regulator [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG1802, GntR Transcriptional regulators [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG1339, Transcriptional regulator of a riboflavin/FAD biosynthetic operon [Transcription / Coenzyme metabolism] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1609, PurR Transcriptional regulators [Transcription] COG1737, RpiR Transcriptional regulators [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG2188, PhnF Transcriptional regulators [Transcription] |
| psy15215 | 1432 | hhsearch probability: 99.68 Identity: 17% subject length: 182 Length of aligned reigon: 172 Coverage over query: 388-630 Coverage over subject: 6-177 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG0358, DnaG DNA primase (bacterial type) [DNA replication, recombination, and repair] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair] |
| psy11871 | 117 | hhsearch probability: 92.07 Identity: 14% subject length: 182 Length of aligned reigon: 49 Coverage over query: 42-91 Coverage over subject: 127-175 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] |
| psy6005 | 386 | hhsearch probability: 90.79 Identity: 11% subject length: 182 Length of aligned reigon: 46 Coverage over query: 9-63 Coverage over subject: 124-169 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3335, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG3355, Predicted transcriptional regulator [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG2345, Predicted transcriptional regulator [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1737, RpiR Transcriptional regulators [Transcription] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| psy262 | 127 | hhsearch probability: 97.04 Identity: 18% subject length: 182 Length of aligned reigon: 44 Coverage over query: 10-53 Coverage over subject: 125-168 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG2345, Predicted transcriptional regulator [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2207, AraC AraC-type DNA-binding domain-containing proteins [Transcription] COG1414, IclR Transcriptional regulator [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG1378, Predicted transcriptional regulators [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG4189, Predicted transcriptional regulator [Transcription] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1802, GntR Transcriptional regulators [Transcription] |
| psy17446 | 235 | hhsearch probability: 96.17 Identity: 26% subject length: 182 Length of aligned reigon: 42 Coverage over query: 23-64 Coverage over subject: 127-168 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG5352, Uncharacterized protein conserved in bacteria [Function unknown] COG1414, IclR Transcriptional regulator [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG1609, PurR Transcriptional regulators [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG4189, Predicted transcriptional regulator [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG1378, Predicted transcriptional regulators [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG1802, GntR Transcriptional regulators [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2973, TrpR Trp operon repressor [Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG1522, Lrp Transcriptional regulators [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG1318, Predicted transcriptional regulators [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] |
| psy5635 | 287 | hhsearch probability: 90.22 Identity: 14% subject length: 182 Length of aligned reigon: 50 Coverage over query: 129-179 Coverage over subject: 127-176 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] |
| psy15598 | 258 | hhsearch probability: 95.63 Identity: 25% subject length: 182 Length of aligned reigon: 44 Coverage over query: 46-89 Coverage over subject: 126-169 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1725, Predicted transcriptional regulators [Transcription] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG2345, Predicted transcriptional regulator [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1802, GntR Transcriptional regulators [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] COG2207, AraC AraC-type DNA-binding domain-containing proteins [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG1476, Predicted transcriptional regulators [Transcription] |
| psy10582 | 173 | hhsearch probability: 96.15 Identity: 20% subject length: 182 Length of aligned reigon: 44 Coverage over query: 27-70 Coverage over subject: 125-168 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG2345, Predicted transcriptional regulator [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1725, Predicted transcriptional regulators [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG1654, BirA Biotin operon repressor [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG2944, Predicted transcriptional regulator [Transcription] COG1609, PurR Transcriptional regulators [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1522, Lrp Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG5352, Uncharacterized protein conserved in bacteria [Function unknown] COG1438, ArgR Arginine repressor [Transcription] COG1802, GntR Transcriptional regulators [Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2186, FadR Transcriptional regulators [Transcription] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG2188, PhnF Transcriptional regulators [Transcription] COG1414, IclR Transcriptional regulator [Transcription] |
| psy16134 | 234 | hhsearch probability: 90.30 Identity: 24% subject length: 182 Length of aligned reigon: 50 Coverage over query: 82-132 Coverage over subject: 127-176 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] |
| psy5033 | 242 | hhsearch probability: 96.72 Identity: 21% subject length: 182 Length of aligned reigon: 42 Coverage over query: 6-47 Coverage over subject: 127-168 |
COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1725, Predicted transcriptional regulators [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG2522, Predicted transcriptional regulator [General function prediction only] COG1342, Predicted DNA-binding proteins [General function prediction only] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG2973, TrpR Trp operon repressor [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG4189, Predicted transcriptional regulator [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG1414, IclR Transcriptional regulator [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1378, Predicted transcriptional regulators [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1609, PurR Transcriptional regulators [Transcription] COG5566, Uncharacterized conserved protein [Function unknown] COG1318, Predicted transcriptional regulators [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] COG2188, PhnF Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1961, PinR Site-specific recombinases, DNA invertase Pin homologs [DNA replication, recombination, and repair] COG0856, Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism] COG5352, Uncharacterized protein conserved in bacteria [Function unknown] |
| psy11565 | 181 | hhsearch probability: 95.78 Identity: 7% subject length: 182 Length of aligned reigon: 42 Coverage over query: 15-62 Coverage over subject: 127-168 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2522, Predicted transcriptional regulator [General function prediction only] COG3355, Predicted transcriptional regulator [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG1414, IclR Transcriptional regulator [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1802, GntR Transcriptional regulators [Transcription] COG5566, Uncharacterized conserved protein [Function unknown] COG4109, Predicted transcriptional regulator containing CBS domains [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG1737, RpiR Transcriptional regulators [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] |
| psy1898 | 230 | hhsearch probability: 95.20 Identity: 26% subject length: 182 Length of aligned reigon: 43 Coverage over query: 99-141 Coverage over subject: 127-169 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG1725, Predicted transcriptional regulators [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG1438, ArgR Arginine repressor [Transcription] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3355, Predicted transcriptional regulator [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG2522, Predicted transcriptional regulator [General function prediction only] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG2345, Predicted transcriptional regulator [Transcription] COG2944, Predicted transcriptional regulator [Transcription] |
| psy3776 | 397 | hhsearch probability: 99.81 Identity: 18% subject length: 182 Length of aligned reigon: 153 Coverage over query: 171-396 Coverage over subject: 5-157 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1502, Cls Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism] COG3886, Predicted HKD family nuclease [DNA replication, recombination, and repair] COG0855, Ppk Polyphosphate kinase [Inorganic ion transport and metabolism] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] |