List of proteins associated with COG cluster: COG1793   CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair]
Protein ID
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Lenth
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analysis report

Similarity with COG COG1793
All predicted COG clusters
psy15581 666 hhsearch probability: 99.75    Identity: 34%
subject length: 444   Length of aligned reigon: 122
Coverage over query: 15-163   Coverage over subject: 271-403
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair]
COG5226, CEG1 mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification]
COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair]
psy14581 124 hhsearch probability: 98.31    Identity: 29%
subject length: 444   Length of aligned reigon: 56
Coverage over query: 38-93   Coverage over subject: 387-443
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair]
psy11421 687 hhsearch probability: 98.03    Identity: 19%
subject length: 444   Length of aligned reigon: 215
Coverage over query: 119-376   Coverage over subject: 134-366
COG5275, BRCT domain type II [General function prediction only]
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair]
COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair]
COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair]
COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair]
COG2003, RadC DNA repair proteins [DNA replication, recombination, and repair]
COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair]
COG1623, Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only]
COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair]
COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair]
COG0177, Nth Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]
psy11422 687 hhsearch probability: 98.03    Identity: 19%
subject length: 444   Length of aligned reigon: 215
Coverage over query: 119-376   Coverage over subject: 134-366
COG5275, BRCT domain type II [General function prediction only]
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair]
COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair]
COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair]
COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair]
COG2003, RadC DNA repair proteins [DNA replication, recombination, and repair]
COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair]
COG1623, Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only]
COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair]
COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair]
COG0177, Nth Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]
psy11423 655 hhsearch probability: 98.14    Identity: 19%
subject length: 444   Length of aligned reigon: 215
Coverage over query: 119-376   Coverage over subject: 134-366
COG5275, BRCT domain type II [General function prediction only]
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair]
COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair]
COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair]
COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair]
COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair]
COG1623, Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only]
COG2003, RadC DNA repair proteins [DNA replication, recombination, and repair]
COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
COG0177, Nth Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]
COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair]
COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair]
psy9353 543 hhsearch probability: 99.85    Identity: 17%
subject length: 444   Length of aligned reigon: 165
Coverage over query: 282-468   Coverage over subject: 134-325
COG5226, CEG1 mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification]
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair]
COG2453, CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
COG2365, Protein tyrosine/serine phosphatase [Signal transduction mechanisms]
COG5599, PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms]
COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair]
COG3453, Uncharacterized protein conserved in bacteria [Function unknown]
COG5350, Predicted protein tyrosine phosphatase [General function prediction only]
psy5247 2286 hhsearch probability: 99.74    Identity: 32%
subject length: 444   Length of aligned reigon: 133
Coverage over query: 2009-2148   Coverage over subject: 271-436
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair]
psy14579 394 hhsearch probability: 97.97    Identity: 18%
subject length: 444   Length of aligned reigon: 105
Coverage over query: 239-390   Coverage over subject: 19-123
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair]
psy761 163 hhsearch probability: 99.74    Identity: 20%
subject length: 444   Length of aligned reigon: 117
Coverage over query: 17-138   Coverage over subject: 53-171
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair]
psy5079 184 hhsearch probability: 99.79    Identity: 25%
subject length: 444   Length of aligned reigon: 118
Coverage over query: 11-167   Coverage over subject: 54-173
COG1793, CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair]