List of proteins associated with COG cluster: COG1958   LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
Protein ID
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Lenth
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analysis report

Similarity with COG COG1958
All predicted COG clusters
psy800 204 hhsearch probability: 99.63    Identity: 32%
subject length: 79   Length of aligned reigon: 65
Coverage over query: 10-74   Coverage over subject: 3-71
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
COG1923, Hfq Uncharacterized host factor I protein [General function prediction only]
psy9934 158 hhsearch probability: 99.80    Identity: 51%
subject length: 79   Length of aligned reigon: 71
Coverage over query: 76-146   Coverage over subject: 5-79
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
COG1923, Hfq Uncharacterized host factor I protein [General function prediction only]
psy488 86 hhsearch probability: 91.60    Identity: 16%
subject length: 79   Length of aligned reigon: 64
Coverage over query: 21-85   Coverage over subject: 7-78
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
psy1222 60 hhsearch probability: 99.67    Identity: 29%
subject length: 79   Length of aligned reigon: 52
Coverage over query: 1-59   Coverage over subject: 24-75
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
psy3154 101 hhsearch probability: 99.85    Identity: 40%
subject length: 79   Length of aligned reigon: 75
Coverage over query: 11-94   Coverage over subject: 5-79
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
COG1923, Hfq Uncharacterized host factor I protein [General function prediction only]
psy1140 142 hhsearch probability: 99.59    Identity: 33%
subject length: 79   Length of aligned reigon: 58
Coverage over query: 3-61   Coverage over subject: 21-79
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
psy9158 133 hhsearch probability: 99.56    Identity: 22%
subject length: 79   Length of aligned reigon: 59
Coverage over query: 17-75   Coverage over subject: 7-78
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
COG1923, Hfq Uncharacterized host factor I protein [General function prediction only]
psy15782 129 hhsearch probability: 99.72    Identity: 34%
subject length: 79   Length of aligned reigon: 65
Coverage over query: 2-66   Coverage over subject: 10-78
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
COG1923, Hfq Uncharacterized host factor I protein [General function prediction only]
psy17123 105 hhsearch probability: 99.83    Identity: 31%
subject length: 79   Length of aligned reigon: 72
Coverage over query: 20-92   Coverage over subject: 6-78
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
COG1923, Hfq Uncharacterized host factor I protein [General function prediction only]
COG0779, Uncharacterized protein conserved in bacteria [Function unknown]
psy5557 213 hhsearch probability: 99.77    Identity: 27%
subject length: 79   Length of aligned reigon: 71
Coverage over query: 107-177   Coverage over subject: 8-79
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
COG1923, Hfq Uncharacterized host factor I protein [General function prediction only]
psy3556 314 hhsearch probability: 99.46    Identity: 33%
subject length: 79   Length of aligned reigon: 49
Coverage over query: 203-257   Coverage over subject: 5-53
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
psy1175 155 hhsearch probability: 99.57    Identity: 40%
subject length: 79   Length of aligned reigon: 57
Coverage over query: 1-57   Coverage over subject: 20-79
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
psy11512 62 hhsearch probability: 99.74    Identity: 47%
subject length: 79   Length of aligned reigon: 43
Coverage over query: 7-49   Coverage over subject: 10-52
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
COG1923, Hfq Uncharacterized host factor I protein [General function prediction only]
COG0779, Uncharacterized protein conserved in bacteria [Function unknown]
psy17024 132 hhsearch probability: 99.82    Identity: 26%
subject length: 79   Length of aligned reigon: 70
Coverage over query: 3-72   Coverage over subject: 5-78
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
COG1923, Hfq Uncharacterized host factor I protein [General function prediction only]
psy10177 116 hhsearch probability: 99.66    Identity: 36%
subject length: 79   Length of aligned reigon: 58
Coverage over query: 1-58   Coverage over subject: 21-79
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
psy11157 111 hhsearch probability: 99.85    Identity: 32%
subject length: 79   Length of aligned reigon: 76
Coverage over query: 17-104   Coverage over subject: 4-79
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
COG1923, Hfq Uncharacterized host factor I protein [General function prediction only]
psy1084 110 hhsearch probability: 99.86    Identity: 33%
subject length: 79   Length of aligned reigon: 76
Coverage over query: 16-103   Coverage over subject: 4-79
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
COG1923, Hfq Uncharacterized host factor I protein [General function prediction only]
psy10748 98 hhsearch probability: 99.84    Identity: 30%
subject length: 79   Length of aligned reigon: 73
Coverage over query: 14-90   Coverage over subject: 4-79
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
COG1923, Hfq Uncharacterized host factor I protein [General function prediction only]
psy6372 88 hhsearch probability: 99.89    Identity: 50%
subject length: 79   Length of aligned reigon: 74
Coverage over query: 3-76   Coverage over subject: 2-79
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
COG1923, Hfq Uncharacterized host factor I protein [General function prediction only]
COG0779, Uncharacterized protein conserved in bacteria [Function unknown]
psy6026 98 hhsearch probability: 99.86    Identity: 33%
subject length: 79   Length of aligned reigon: 73
Coverage over query: 3-75   Coverage over subject: 5-79
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
COG1923, Hfq Uncharacterized host factor I protein [General function prediction only]
psy14196 79 hhsearch probability: 99.69    Identity: 19%
subject length: 79   Length of aligned reigon: 72
Coverage over query: 3-77   Coverage over subject: 5-78
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
COG1923, Hfq Uncharacterized host factor I protein [General function prediction only]
COG0779, Uncharacterized protein conserved in bacteria [Function unknown]
psy15520 141 hhsearch probability: 93.76    Identity: 15%
subject length: 79   Length of aligned reigon: 33
Coverage over query: 23-55   Coverage over subject: 16-48
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
psy10835 80 hhsearch probability: 99.88    Identity: 36%
subject length: 79   Length of aligned reigon: 72
Coverage over query: 3-74   Coverage over subject: 4-79
COG1958, LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription]
COG1923, Hfq Uncharacterized host factor I protein [General function prediction only]
COG0779, Uncharacterized protein conserved in bacteria [Function unknown]