| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG2512 |
All predicted COG clusters |
|---|---|---|---|
| psy4140 | 337 | hhsearch probability: 91.89 Identity: 10% subject length: 258 Length of aligned reigon: 58 Coverage over query: 74-131 Coverage over subject: 188-247 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG3355, Predicted transcriptional regulator [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1378, Predicted transcriptional regulators [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] |
| psy16048 | 104 | hhsearch probability: 92.27 Identity: 14% subject length: 258 Length of aligned reigon: 44 Coverage over query: 14-57 Coverage over subject: 194-239 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1309, AcrR Transcriptional regulator [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG3413, Predicted DNA binding protein [General function prediction only] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG4800, Predicted transcriptional regulator with an HTH domain [Transcription] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3423, Nlp Predicted transcriptional regulator [Transcription] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] COG1522, Lrp Transcriptional regulators [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2378, Predicted transcriptional regulator [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG2186, FadR Transcriptional regulators [Transcription] COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism] COG1414, IclR Transcriptional regulator [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG3355, Predicted transcriptional regulator [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] |
| psy10582 | 173 | hhsearch probability: 94.27 Identity: 24% subject length: 258 Length of aligned reigon: 54 Coverage over query: 27-80 Coverage over subject: 190-245 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG2345, Predicted transcriptional regulator [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1725, Predicted transcriptional regulators [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG1654, BirA Biotin operon repressor [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG2944, Predicted transcriptional regulator [Transcription] COG1609, PurR Transcriptional regulators [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1522, Lrp Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG5352, Uncharacterized protein conserved in bacteria [Function unknown] COG1438, ArgR Arginine repressor [Transcription] COG1802, GntR Transcriptional regulators [Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2186, FadR Transcriptional regulators [Transcription] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG2188, PhnF Transcriptional regulators [Transcription] COG1414, IclR Transcriptional regulator [Transcription] |
| psy15598 | 258 | hhsearch probability: 93.89 Identity: 26% subject length: 258 Length of aligned reigon: 57 Coverage over query: 44-100 Coverage over subject: 189-247 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1725, Predicted transcriptional regulators [Transcription] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG2345, Predicted transcriptional regulator [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1802, GntR Transcriptional regulators [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] COG2207, AraC AraC-type DNA-binding domain-containing proteins [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG1476, Predicted transcriptional regulators [Transcription] |
| psy17446 | 235 | hhsearch probability: 95.31 Identity: 21% subject length: 258 Length of aligned reigon: 53 Coverage over query: 18-70 Coverage over subject: 187-241 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG5352, Uncharacterized protein conserved in bacteria [Function unknown] COG1414, IclR Transcriptional regulator [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG1609, PurR Transcriptional regulators [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG4189, Predicted transcriptional regulator [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG1378, Predicted transcriptional regulators [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG1802, GntR Transcriptional regulators [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2973, TrpR Trp operon repressor [Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG1522, Lrp Transcriptional regulators [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG1318, Predicted transcriptional regulators [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] |
| psy262 | 127 | hhsearch probability: 96.64 Identity: 15% subject length: 258 Length of aligned reigon: 55 Coverage over query: 10-64 Coverage over subject: 190-246 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG2345, Predicted transcriptional regulator [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2207, AraC AraC-type DNA-binding domain-containing proteins [Transcription] COG1414, IclR Transcriptional regulator [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG1378, Predicted transcriptional regulators [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG4189, Predicted transcriptional regulator [Transcription] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1802, GntR Transcriptional regulators [Transcription] |
| psy6501 | 174 | hhsearch probability: 91.91 Identity: 16% subject length: 258 Length of aligned reigon: 50 Coverage over query: 17-66 Coverage over subject: 181-231 |
COG1813, Predicted transcription factor, homolog of eukaryotic MBF1 [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG3620, Predicted transcriptional regulator with C-terminal CBS domains [Transcription] COG1709, Predicted transcriptional regulator [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG1426, Predicted transcriptional regulator contains Xre-like HTH domain [Function unknown] COG1396, HipB Predicted transcriptional regulators [Transcription] COG1395, Predicted transcriptional regulator [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] COG5606, Uncharacterized conserved small protein [Function unknown] COG3423, Nlp Predicted transcriptional regulator [Transcription] COG3655, Predicted transcriptional regulator [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG3636, Predicted transcriptional regulator [Transcription] COG4197, Uncharacterized protein conserved in bacteria, prophage-related [Function unknown] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG4800, Predicted transcriptional regulator with an HTH domain [Transcription] COG2842, Uncharacterized ATPase, putative transposase [General function prediction only] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG5499, Predicted transcription regulator containing HTH domain [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1609, PurR Transcriptional regulators [Transcription] COG1513, CynS Cyanate lyase [Inorganic ion transport and metabolism] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG2973, TrpR Trp operon repressor [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] |
| psy11565 | 181 | hhsearch probability: 94.54 Identity: 15% subject length: 258 Length of aligned reigon: 55 Coverage over query: 14-74 Coverage over subject: 191-247 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2522, Predicted transcriptional regulator [General function prediction only] COG3355, Predicted transcriptional regulator [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG1414, IclR Transcriptional regulator [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1802, GntR Transcriptional regulators [Transcription] COG5566, Uncharacterized conserved protein [Function unknown] COG4109, Predicted transcriptional regulator containing CBS domains [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG1737, RpiR Transcriptional regulators [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] |
| psy9016 | 104 | hhsearch probability: 90.20 Identity: 16% subject length: 258 Length of aligned reigon: 37 Coverage over query: 51-88 Coverage over subject: 199-236 |
COG1522, Lrp Transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1414, IclR Transcriptional regulator [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1737, RpiR Transcriptional regulators [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG3283, TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] COG1510, Predicted transcriptional regulators [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1309, AcrR Transcriptional regulator [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1654, BirA Biotin operon repressor [Transcription] |
| psy5033 | 242 | hhsearch probability: 96.15 Identity: 25% subject length: 258 Length of aligned reigon: 52 Coverage over query: 5-56 Coverage over subject: 191-244 |
COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1725, Predicted transcriptional regulators [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG2522, Predicted transcriptional regulator [General function prediction only] COG1342, Predicted DNA-binding proteins [General function prediction only] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG2973, TrpR Trp operon repressor [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG4189, Predicted transcriptional regulator [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG1414, IclR Transcriptional regulator [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1378, Predicted transcriptional regulators [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1609, PurR Transcriptional regulators [Transcription] COG5566, Uncharacterized conserved protein [Function unknown] COG1318, Predicted transcriptional regulators [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] COG2188, PhnF Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1961, PinR Site-specific recombinases, DNA invertase Pin homologs [DNA replication, recombination, and repair] COG0856, Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism] COG5352, Uncharacterized protein conserved in bacteria [Function unknown] |
| psy5506 | 257 | hhsearch probability: 91.68 Identity: 19% subject length: 258 Length of aligned reigon: 48 Coverage over query: 52-101 Coverage over subject: 186-234 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG3355, Predicted transcriptional regulator [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1737, RpiR Transcriptional regulators [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG2169, Ada Adenosine deaminase [Nucleotide transport and metabolism] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| psy1871 | 139 | hhsearch probability: 91.54 Identity: 19% subject length: 258 Length of aligned reigon: 81 Coverage over query: 51-131 Coverage over subject: 175-255 |
COG4901, Ribosomal protein S25 [Translation, ribosomal structure and biogenesis] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1522, Lrp Transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG4465, CodY Pleiotropic transcriptional repressor [Transcription] COG1802, GntR Transcriptional regulators [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG1959, Predicted transcriptional regulator [Transcription] |
| psy10346 | 292 | hhsearch probability: 92.28 Identity: 14% subject length: 258 Length of aligned reigon: 59 Coverage over query: 4-63 Coverage over subject: 195-255 |
COG0016, PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] COG1846, MarR Transcriptional regulators [Transcription] COG1497, Predicted transcriptional regulator [Transcription] COG4754, Uncharacterized conserved protein [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1695, Predicted transcriptional regulators [Transcription] COG1733, Predicted transcriptional regulators [Transcription] COG4742, Predicted transcriptional regulator [Transcription] COG3432, Predicted transcriptional regulator [Transcription] COG5045, Ribosomal protein S10E [Translation, ribosomal structure and biogenesis] COG2024, Phenylalanyl-tRNA synthetase alpha subunit (archaeal type) [Translation, ribosomal structure and biogenesis] COG1522, Lrp Transcriptional regulators [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG1339, Transcriptional regulator of a riboflavin/FAD biosynthetic operon [Transcription / Coenzyme metabolism] COG2524, Predicted transcriptional regulator, contains C-terminal CBS domains [Transcription] |
| psy15954 | 81 | hhsearch probability: 95.97 Identity: 39% subject length: 258 Length of aligned reigon: 28 Coverage over query: 6-33 Coverage over subject: 210-237 |
COG1522, Lrp Transcriptional regulators [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG3355, Predicted transcriptional regulator [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1654, BirA Biotin operon repressor [Transcription] COG1737, RpiR Transcriptional regulators [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1414, IclR Transcriptional regulator [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2207, AraC AraC-type DNA-binding domain-containing proteins [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG3283, TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] COG1609, PurR Transcriptional regulators [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1309, AcrR Transcriptional regulator [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG3877, Uncharacterized protein conserved in bacteria [Function unknown] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |
| psy5744 | 157 | hhsearch probability: 95.16 Identity: 10% subject length: 258 Length of aligned reigon: 48 Coverage over query: 31-78 Coverage over subject: 195-243 |
COG1675, TFA1 Transcription initiation factor IIE, alpha subunit [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1959, Predicted transcriptional regulator [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG1378, Predicted transcriptional regulators [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG5625, Predicted transcription regulator containing HTH domain [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1414, IclR Transcriptional regulator [Transcription] COG1802, GntR Transcriptional regulators [Transcription] COG1777, Predicted transcriptional regulators [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG4190, Predicted transcriptional regulator [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG0640, ArsR Predicted transcriptional regulators [Transcription] COG4189, Predicted transcriptional regulator [Transcription] COG2901, Fis Factor for inversion stimulation Fis, transcriptional activator [Transcription / DNA replication, recombination, and repair] COG1510, Predicted transcriptional regulators [Transcription] |
| psy6552 | 254 | hhsearch probability: 91.74 Identity: 16% subject length: 258 Length of aligned reigon: 55 Coverage over query: 175-230 Coverage over subject: 191-245 |
COG3355, Predicted transcriptional regulator [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG4901, Ribosomal protein S25 [Translation, ribosomal structure and biogenesis] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] |
| psy7778 | 117 | hhsearch probability: 98.03 Identity: 28% subject length: 258 Length of aligned reigon: 57 Coverage over query: 24-81 Coverage over subject: 189-245 |
COG5111, RPC34 DNA-directed RNA polymerase III, subunit C34 [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG1959, Predicted transcriptional regulator [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG1378, Predicted transcriptional regulators [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] |