List of proteins associated with COG cluster: COG2962   RarD Predicted permeases [General function prediction only]
Protein ID
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analysis report

Similarity with COG COG2962
All predicted COG clusters
psy10147 179 hhsearch probability: 90.86    Identity: 11%
subject length: 293   Length of aligned reigon: 64
Coverage over query: 33-104   Coverage over subject: 60-124
COG2223, NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
COG2814, AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
COG2271, UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
COG3104, PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
COG2211, MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
COG2807, CynX Cyanate permease [Inorganic ion transport and metabolism]
COG0738, FucP Fucose permease [Carbohydrate transport and metabolism]
COG2270, Permeases of the major facilitator superfamily [General function prediction only]
COG0477, ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
COG2962, RarD Predicted permeases [General function prediction only]
psy12699 1269 hhsearch probability: 97.40    Identity: 14%
subject length: 293   Length of aligned reigon: 142
Coverage over query: 206-355   Coverage over subject: 5-147
COG0513, SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]
COG1204, Superfamily II helicase [General function prediction only]
COG1197, Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]
COG0514, RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
COG1202, Superfamily II helicase, archaea-specific [General function prediction only]
COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription]
COG4581, Superfamily II RNA helicase [DNA replication, recombination, and repair]
COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair]
COG1201, Lhr Lhr-like helicases [General function prediction only]
COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair]
COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only]
COG5070, VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]
COG4098, comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair]
COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]
COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]
COG1110, Reverse gyrase [DNA replication, recombination, and repair]
COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]
COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair]
COG4889, Predicted helicase [General function prediction only]
COG2510, Predicted membrane protein [Function unknown]
COG2962, RarD Predicted permeases [General function prediction only]
COG4975, GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]
COG0697, RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
COG0653, SecA Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking and secretion]
COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair]
COG5006, rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
COG2076, EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]
COG0553, HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]
COG3238, Uncharacterized protein conserved in bacteria [Function unknown]
psy11593 400 hhsearch probability: 95.80    Identity: 13%
subject length: 293   Length of aligned reigon: 79
Coverage over query: 152-230   Coverage over subject: 207-285
COG2510, Predicted membrane protein [Function unknown]
COG5006, rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
COG0697, RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
COG2076, EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
COG4975, GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
COG2962, RarD Predicted permeases [General function prediction only]
COG3238, Uncharacterized protein conserved in bacteria [Function unknown]
COG5070, VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
psy348 293 hhsearch probability: 97.45    Identity: 19%
subject length: 293   Length of aligned reigon: 139
Coverage over query: 116-270   Coverage over subject: 6-145
COG5070, VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG2510, Predicted membrane protein [Function unknown]
COG2962, RarD Predicted permeases [General function prediction only]
COG0697, RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
COG2076, EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
COG4975, GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
COG5006, rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
psy1825 327 hhsearch probability: 98.08    Identity: 13%
subject length: 293   Length of aligned reigon: 139
Coverage over query: 166-310   Coverage over subject: 5-144
COG2510, Predicted membrane protein [Function unknown]
COG2962, RarD Predicted permeases [General function prediction only]
COG0697, RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
COG2076, EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
COG5006, rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
COG3238, Uncharacterized protein conserved in bacteria [Function unknown]
COG5070, VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG4975, GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
psy14376 327 hhsearch probability: 98.08    Identity: 13%
subject length: 293   Length of aligned reigon: 139
Coverage over query: 166-310   Coverage over subject: 5-144
COG2510, Predicted membrane protein [Function unknown]
COG2962, RarD Predicted permeases [General function prediction only]
COG0697, RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
COG2076, EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
COG5006, rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
COG3238, Uncharacterized protein conserved in bacteria [Function unknown]
COG5070, VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG4975, GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
psy16816 470 hhsearch probability: 97.04    Identity: 21%
subject length: 293   Length of aligned reigon: 137
Coverage over query: 269-415   Coverage over subject: 5-147
COG5006, rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
COG5070, VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG2510, Predicted membrane protein [Function unknown]
COG2962, RarD Predicted permeases [General function prediction only]
COG0697, RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
COG4975, GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
COG2076, EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
COG3238, Uncharacterized protein conserved in bacteria [Function unknown]
psy13326 143 hhsearch probability: 92.57    Identity: 15%
subject length: 293   Length of aligned reigon: 84
Coverage over query: 14-98   Coverage over subject: 206-290
COG5070, VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG2510, Predicted membrane protein [Function unknown]
COG2076, EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
COG0697, RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
COG2962, RarD Predicted permeases [General function prediction only]
psy1072 324 hhsearch probability: 98.20    Identity: 12%
subject length: 293   Length of aligned reigon: 139
Coverage over query: 164-308   Coverage over subject: 5-144
COG2510, Predicted membrane protein [Function unknown]
COG2962, RarD Predicted permeases [General function prediction only]
COG0697, RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
COG2076, EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
COG5006, rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
COG4975, GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
COG5070, VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG3238, Uncharacterized protein conserved in bacteria [Function unknown]
psy1074 427 hhsearch probability: 97.09    Identity: 12%
subject length: 293   Length of aligned reigon: 139
Coverage over query: 254-412   Coverage over subject: 6-145
COG5070, VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG5006, rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
COG2510, Predicted membrane protein [Function unknown]
COG2962, RarD Predicted permeases [General function prediction only]
COG4975, GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
COG0697, RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
COG2076, EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
psy5688 97 hhsearch probability: 96.87    Identity: 14%
subject length: 293   Length of aligned reigon: 66
Coverage over query: 28-93   Coverage over subject: 69-134
COG2510, Predicted membrane protein [Function unknown]
COG5006, rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
COG2076, EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
COG0697, RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
COG2962, RarD Predicted permeases [General function prediction only]
COG4975, GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
COG5070, VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
psy14104 319 hhsearch probability: 98.45    Identity: 19%
subject length: 293   Length of aligned reigon: 139
Coverage over query: 166-308   Coverage over subject: 6-144
COG5070, VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG2510, Predicted membrane protein [Function unknown]
COG2962, RarD Predicted permeases [General function prediction only]
COG0697, RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
COG2076, EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
COG3238, Uncharacterized protein conserved in bacteria [Function unknown]
COG4975, GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
COG5006, rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
psy14361 223 hhsearch probability: 94.89    Identity: 18%
subject length: 293   Length of aligned reigon: 84
Coverage over query: 73-163   Coverage over subject: 76-164
COG0697, RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
COG5070, VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG2510, Predicted membrane protein [Function unknown]
COG2962, RarD Predicted permeases [General function prediction only]
COG5006, rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
COG2076, EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
psy14395 471 hhsearch probability: 97.81    Identity: 13%
subject length: 293   Length of aligned reigon: 141
Coverage over query: 311-456   Coverage over subject: 5-146
COG5070, VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG5006, rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
COG2962, RarD Predicted permeases [General function prediction only]
COG0697, RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
COG2510, Predicted membrane protein [Function unknown]
COG2076, EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
COG3238, Uncharacterized protein conserved in bacteria [Function unknown]
COG4975, GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
psy5010 178 hhsearch probability: 98.46    Identity: 13%
subject length: 293   Length of aligned reigon: 140
Coverage over query: 16-161   Coverage over subject: 4-144
COG5070, VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG2510, Predicted membrane protein [Function unknown]
COG5006, rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
COG2962, RarD Predicted permeases [General function prediction only]
COG0697, RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
COG2076, EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
COG4975, GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
COG3238, Uncharacterized protein conserved in bacteria [Function unknown]
psy665 180 hhsearch probability: 98.74    Identity: 13%
subject length: 293   Length of aligned reigon: 145
Coverage over query: 18-167   Coverage over subject: 3-148
COG2510, Predicted membrane protein [Function unknown]
COG5070, VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG5006, rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
COG2962, RarD Predicted permeases [General function prediction only]
COG0697, RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
COG3238, Uncharacterized protein conserved in bacteria [Function unknown]
COG2076, EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
COG4975, GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
psy2233 365 hhsearch probability: 99.37    Identity: 19%
subject length: 293   Length of aligned reigon: 161
Coverage over query: 145-329   Coverage over subject: 4-170
COG0697, RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
COG2962, RarD Predicted permeases [General function prediction only]
COG5006, rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
COG2510, Predicted membrane protein [Function unknown]
COG4975, GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
COG3238, Uncharacterized protein conserved in bacteria [Function unknown]
COG2076, EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
COG5070, VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
psy7931 358 hhsearch probability: 97.51    Identity: 15%
subject length: 293   Length of aligned reigon: 121
Coverage over query: 216-348   Coverage over subject: 100-220
COG5070, VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG2962, RarD Predicted permeases [General function prediction only]
COG2510, Predicted membrane protein [Function unknown]
COG5006, rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
COG0697, RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
COG2076, EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]