| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG2963 |
All predicted COG clusters |
|---|---|---|---|
| psy5506 | 257 | hhsearch probability: 90.63 Identity: 11% subject length: 116 Length of aligned reigon: 36 Coverage over query: 4-47 Coverage over subject: 19-55 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG3355, Predicted transcriptional regulator [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1737, RpiR Transcriptional regulators [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG2169, Ada Adenosine deaminase [Nucleotide transport and metabolism] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| psy1904 | 163 | hhsearch probability: 94.20 Identity: 17% subject length: 116 Length of aligned reigon: 36 Coverage over query: 4-39 Coverage over subject: 23-59 |
COG5576, Homeodomain-containing transcription factor [Transcription] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2522, Predicted transcriptional regulator [General function prediction only] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3620, Predicted transcriptional regulator with C-terminal CBS domains [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] |
| psy16265 | 300 | hhsearch probability: 91.28 Identity: 16% subject length: 116 Length of aligned reigon: 45 Coverage over query: 2-46 Coverage over subject: 6-51 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] |
| psy13113 | 286 | hhsearch probability: 91.41 Identity: 19% subject length: 116 Length of aligned reigon: 48 Coverage over query: 10-57 Coverage over subject: 5-53 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] |
| psy4140 | 337 | hhsearch probability: 96.33 Identity: 10% subject length: 116 Length of aligned reigon: 51 Coverage over query: 193-243 Coverage over subject: 5-57 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG3355, Predicted transcriptional regulator [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1378, Predicted transcriptional regulators [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] |
| psy13928 | 544 | hhsearch probability: 92.09 Identity: 24% subject length: 116 Length of aligned reigon: 45 Coverage over query: 346-390 Coverage over subject: 5-51 |
COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG5201, SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2901, Fis Factor for inversion stimulation Fis, transcriptional activator [Transcription / DNA replication, recombination, and repair] COG3604, FhlA Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] |
| psy11565 | 181 | hhsearch probability: 96.74 Identity: 6% subject length: 116 Length of aligned reigon: 48 Coverage over query: 14-67 Coverage over subject: 6-55 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2522, Predicted transcriptional regulator [General function prediction only] COG3355, Predicted transcriptional regulator [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG1414, IclR Transcriptional regulator [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1802, GntR Transcriptional regulators [Transcription] COG5566, Uncharacterized conserved protein [Function unknown] COG4109, Predicted transcriptional regulator containing CBS domains [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG1737, RpiR Transcriptional regulators [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] |
| psy4300 | 307 | hhsearch probability: 92.83 Identity: 8% subject length: 116 Length of aligned reigon: 51 Coverage over query: 27-77 Coverage over subject: 5-56 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair] |
| psy15513 | 77 | hhsearch probability: 97.79 Identity: 16% subject length: 116 Length of aligned reigon: 37 Coverage over query: 3-39 Coverage over subject: 22-59 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2944, Predicted transcriptional regulator [Transcription] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG1959, Predicted transcriptional regulator [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1846, MarR Transcriptional regulators [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG5484, Uncharacterized conserved protein [Function unknown] COG1414, IclR Transcriptional regulator [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG1802, GntR Transcriptional regulators [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG1339, Transcriptional regulator of a riboflavin/FAD biosynthetic operon [Transcription / Coenzyme metabolism] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1609, PurR Transcriptional regulators [Transcription] COG1737, RpiR Transcriptional regulators [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG2188, PhnF Transcriptional regulators [Transcription] |
| psy6005 | 386 | hhsearch probability: 97.02 Identity: 12% subject length: 116 Length of aligned reigon: 52 Coverage over query: 10-68 Coverage over subject: 5-56 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3335, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG3355, Predicted transcriptional regulator [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG2345, Predicted transcriptional regulator [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1737, RpiR Transcriptional regulators [Transcription] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| psy1898 | 230 | hhsearch probability: 97.89 Identity: 16% subject length: 116 Length of aligned reigon: 51 Coverage over query: 97-147 Coverage over subject: 5-57 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG1725, Predicted transcriptional regulators [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG1438, ArgR Arginine repressor [Transcription] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3355, Predicted transcriptional regulator [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG2522, Predicted transcriptional regulator [General function prediction only] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG2345, Predicted transcriptional regulator [Transcription] COG2944, Predicted transcriptional regulator [Transcription] |
| psy5033 | 242 | hhsearch probability: 98.06 Identity: 26% subject length: 116 Length of aligned reigon: 50 Coverage over query: 4-53 Coverage over subject: 5-56 |
COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1725, Predicted transcriptional regulators [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG2522, Predicted transcriptional regulator [General function prediction only] COG1342, Predicted DNA-binding proteins [General function prediction only] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG2973, TrpR Trp operon repressor [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG4189, Predicted transcriptional regulator [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG1414, IclR Transcriptional regulator [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1378, Predicted transcriptional regulators [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1609, PurR Transcriptional regulators [Transcription] COG5566, Uncharacterized conserved protein [Function unknown] COG1318, Predicted transcriptional regulators [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] COG2188, PhnF Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1961, PinR Site-specific recombinases, DNA invertase Pin homologs [DNA replication, recombination, and repair] COG0856, Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism] COG5352, Uncharacterized protein conserved in bacteria [Function unknown] |
| psy17446 | 235 | hhsearch probability: 97.88 Identity: 23% subject length: 116 Length of aligned reigon: 48 Coverage over query: 21-68 Coverage over subject: 5-54 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG5352, Uncharacterized protein conserved in bacteria [Function unknown] COG1414, IclR Transcriptional regulator [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG1609, PurR Transcriptional regulators [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG4189, Predicted transcriptional regulator [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG1378, Predicted transcriptional regulators [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG1802, GntR Transcriptional regulators [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2973, TrpR Trp operon repressor [Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG1522, Lrp Transcriptional regulators [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG1318, Predicted transcriptional regulators [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] |
| psy2205 | 607 | hhsearch probability: 93.84 Identity: 20% subject length: 116 Length of aligned reigon: 41 Coverage over query: 482-522 Coverage over subject: 5-47 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG3423, Nlp Predicted transcriptional regulator [Transcription] |
| psy13117 | 233 | hhsearch probability: 96.78 Identity: 25% subject length: 116 Length of aligned reigon: 36 Coverage over query: 3-38 Coverage over subject: 15-52 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2522, Predicted transcriptional regulator [General function prediction only] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1522, Lrp Transcriptional regulators [Transcription] |
| psy262 | 127 | hhsearch probability: 98.29 Identity: 18% subject length: 116 Length of aligned reigon: 68 Coverage over query: 10-78 Coverage over subject: 5-74 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG2345, Predicted transcriptional regulator [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG2207, AraC AraC-type DNA-binding domain-containing proteins [Transcription] COG1414, IclR Transcriptional regulator [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG1378, Predicted transcriptional regulators [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG4189, Predicted transcriptional regulator [Transcription] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1802, GntR Transcriptional regulators [Transcription] |
| psy10582 | 173 | hhsearch probability: 98.09 Identity: 22% subject length: 116 Length of aligned reigon: 50 Coverage over query: 27-76 Coverage over subject: 5-56 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG2345, Predicted transcriptional regulator [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1476, Predicted transcriptional regulators [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1725, Predicted transcriptional regulators [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG4496, Uncharacterized protein conserved in bacteria [Function unknown] COG1654, BirA Biotin operon repressor [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG2944, Predicted transcriptional regulator [Transcription] COG1609, PurR Transcriptional regulators [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1522, Lrp Transcriptional regulators [Transcription] COG1846, MarR Transcriptional regulators [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG5352, Uncharacterized protein conserved in bacteria [Function unknown] COG1438, ArgR Arginine repressor [Transcription] COG1802, GntR Transcriptional regulators [Transcription] COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2186, FadR Transcriptional regulators [Transcription] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG2188, PhnF Transcriptional regulators [Transcription] COG1414, IclR Transcriptional regulator [Transcription] |
| psy11312 | 479 | hhsearch probability: 97.34 Identity: 25% subject length: 116 Length of aligned reigon: 44 Coverage over query: 8-51 Coverage over subject: 5-50 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG3335, Transposase and inactivated derivatives [DNA replication, recombination, and repair] |
| psy11222 | 455 | hhsearch probability: 96.62 Identity: 17% subject length: 116 Length of aligned reigon: 48 Coverage over query: 150-197 Coverage over subject: 5-54 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] |
| psy9109 | 172 | hhsearch probability: 93.35 Identity: 19% subject length: 116 Length of aligned reigon: 42 Coverage over query: 102-143 Coverage over subject: 5-47 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] |
| psy15603 | 590 | hhsearch probability: 96.97 Identity: 23% subject length: 116 Length of aligned reigon: 43 Coverage over query: 28-70 Coverage over subject: 5-49 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] |
| psy15598 | 258 | hhsearch probability: 97.93 Identity: 14% subject length: 116 Length of aligned reigon: 49 Coverage over query: 45-93 Coverage over subject: 5-55 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG1725, Predicted transcriptional regulators [Transcription] COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG1438, ArgR Arginine repressor [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG1321, TroR Mn-dependent transcriptional regulator [Transcription] COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] COG2345, Predicted transcriptional regulator [Transcription] COG1654, BirA Biotin operon repressor [Transcription] COG1522, Lrp Transcriptional regulators [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG3398, Uncharacterized protein conserved in archaea [Function unknown] COG1802, GntR Transcriptional regulators [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] COG2207, AraC AraC-type DNA-binding domain-containing proteins [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2186, FadR Transcriptional regulators [Transcription] COG1476, Predicted transcriptional regulators [Transcription] |
| psy15391 | 277 | hhsearch probability: 95.38 Identity: 5% subject length: 116 Length of aligned reigon: 42 Coverage over query: 33-74 Coverage over subject: 5-48 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] |
| psy17316 | 229 | hhsearch probability: 98.46 Identity: 20% subject length: 116 Length of aligned reigon: 46 Coverage over query: 30-75 Coverage over subject: 5-51 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG1342, Predicted DNA-binding proteins [General function prediction only] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG5484, Uncharacterized conserved protein [Function unknown] COG2207, AraC AraC-type DNA-binding domain-containing proteins [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG2901, Fis Factor for inversion stimulation Fis, transcriptional activator [Transcription / DNA replication, recombination, and repair] COG2973, TrpR Trp operon repressor [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] |
| psy6847 | 573 | hhsearch probability: 97.71 Identity: 17% subject length: 116 Length of aligned reigon: 52 Coverage over query: 1-54 Coverage over subject: 1-53 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3335, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] |
| psy13727 | 218 | hhsearch probability: 97.93 Identity: 16% subject length: 116 Length of aligned reigon: 43 Coverage over query: 16-58 Coverage over subject: 5-49 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2522, Predicted transcriptional regulator [General function prediction only] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG4800, Predicted transcriptional regulator with an HTH domain [Transcription] |
| psy13114 | 634 | hhsearch probability: 97.31 Identity: 24% subject length: 116 Length of aligned reigon: 46 Coverage over query: 87-132 Coverage over subject: 5-51 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] |
| psy2499 | 395 | hhsearch probability: 97.68 Identity: 21% subject length: 116 Length of aligned reigon: 47 Coverage over query: 55-101 Coverage over subject: 5-52 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] |
| psy1554 | 296 | hhsearch probability: 97.67 Identity: 20% subject length: 116 Length of aligned reigon: 45 Coverage over query: 11-55 Coverage over subject: 5-51 |
COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG3413, Predicted DNA binding protein [General function prediction only] |
| psy3580 | 217 | hhsearch probability: 98.75 Identity: 30% subject length: 116 Length of aligned reigon: 44 Coverage over query: 1-44 Coverage over subject: 5-50 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG5484, Uncharacterized conserved protein [Function unknown] COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2944, Predicted transcriptional regulator [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG4800, Predicted transcriptional regulator with an HTH domain [Transcription] COG2973, TrpR Trp operon repressor [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1476, Predicted transcriptional regulators [Transcription] COG1725, Predicted transcriptional regulators [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2345, Predicted transcriptional regulator [Transcription] |
| psy277 | 313 | hhsearch probability: 97.51 Identity: 31% subject length: 116 Length of aligned reigon: 45 Coverage over query: 100-144 Coverage over subject: 5-50 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] |
| psy16048 | 104 | hhsearch probability: 98.46 Identity: 15% subject length: 116 Length of aligned reigon: 48 Coverage over query: 9-56 Coverage over subject: 5-53 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1309, AcrR Transcriptional regulator [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG3413, Predicted DNA binding protein [General function prediction only] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG4800, Predicted transcriptional regulator with an HTH domain [Transcription] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3423, Nlp Predicted transcriptional regulator [Transcription] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] COG1522, Lrp Transcriptional regulators [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG2378, Predicted transcriptional regulator [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG2186, FadR Transcriptional regulators [Transcription] COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism] COG1414, IclR Transcriptional regulator [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG3355, Predicted transcriptional regulator [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2512, Predicted membrane-associated trancriptional regulator [Transcription] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] COG2964, Uncharacterized protein conserved in bacteria [Function unknown] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] |
| psy18214 | 151 | hhsearch probability: 98.41 Identity: 30% subject length: 116 Length of aligned reigon: 46 Coverage over query: 46-91 Coverage over subject: 5-51 |
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG3423, Nlp Predicted transcriptional regulator [Transcription] COG3311, AlpA Predicted transcriptional regulator [Transcription] COG1309, AcrR Transcriptional regulator [Transcription] COG1710, Uncharacterized protein conserved in archaea [Function unknown] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG4800, Predicted transcriptional regulator with an HTH domain [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism] |
| psy12434 | 112 | hhsearch probability: 98.61 Identity: 17% subject length: 116 Length of aligned reigon: 47 Coverage over query: 39-85 Coverage over subject: 5-52 |
COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] COG1522, Lrp Transcriptional regulators [Transcription] COG2944, Predicted transcriptional regulator [Transcription] COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] COG3423, Nlp Predicted transcriptional regulator [Transcription] COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair] COG0789, SoxR Predicted transcriptional regulators [Transcription] COG2522, Predicted transcriptional regulator [General function prediction only] COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only] COG3311, AlpA Predicted transcriptional regulator [Transcription] |