List of proteins associated with COG cluster: COG3413   Predicted DNA binding protein [General function prediction only]
Protein ID
Link to complete
analysis report

Lenth
Link to complete
analysis report

Similarity with COG COG3413
All predicted COG clusters
psy11565 181 hhsearch probability: 90.28    Identity: 9%
subject length: 215   Length of aligned reigon: 43
Coverage over query: 75-123   Coverage over subject: 155-202
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]
COG3398, Uncharacterized protein conserved in archaea [Function unknown]
COG1321, TroR Mn-dependent transcriptional regulator [Transcription]
COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription]
COG1438, ArgR Arginine repressor [Transcription]
COG1710, Uncharacterized protein conserved in archaea [Function unknown]
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]
COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]
COG1725, Predicted transcriptional regulators [Transcription]
COG2512, Predicted membrane-associated trancriptional regulator [Transcription]
COG2739, Uncharacterized protein conserved in bacteria [Function unknown]
COG2522, Predicted transcriptional regulator [General function prediction only]
COG3355, Predicted transcriptional regulator [Transcription]
COG5484, Uncharacterized conserved protein [Function unknown]
COG1414, IclR Transcriptional regulator [Transcription]
COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]
COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]
COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]
COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG4496, Uncharacterized protein conserved in bacteria [Function unknown]
COG2964, Uncharacterized protein conserved in bacteria [Function unknown]
COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription]
COG1654, BirA Biotin operon repressor [Transcription]
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription]
COG1802, GntR Transcriptional regulators [Transcription]
COG5566, Uncharacterized conserved protein [Function unknown]
COG4109, Predicted transcriptional regulator containing CBS domains [Transcription]
COG1846, MarR Transcriptional regulators [Transcription]
COG1522, Lrp Transcriptional regulators [Transcription]
COG0789, SoxR Predicted transcriptional regulators [Transcription]
COG1737, RpiR Transcriptional regulators [Transcription]
COG3413, Predicted DNA binding protein [General function prediction only]
psy15215 1432 hhsearch probability: 94.39    Identity: 23%
subject length: 215   Length of aligned reigon: 53
Coverage over query: 576-628   Coverage over subject: 155-210
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription]
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription]
COG0358, DnaG DNA primase (bacterial type) [DNA replication, recombination, and repair]
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]
COG4566, TtrR Response regulator [Signal transduction mechanisms]
COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription]
COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]
COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription]
COG3413, Predicted DNA binding protein [General function prediction only]
COG1342, Predicted DNA-binding proteins [General function prediction only]
COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair]
COG2739, Uncharacterized protein conserved in bacteria [Function unknown]
COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]
psy10582 173 hhsearch probability: 93.47    Identity: 28%
subject length: 215   Length of aligned reigon: 43
Coverage over query: 28-70   Coverage over subject: 154-203
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]
COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription]
COG3355, Predicted transcriptional regulator [Transcription]
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]
COG5484, Uncharacterized conserved protein [Function unknown]
COG2345, Predicted transcriptional regulator [Transcription]
COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]
COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]
COG0789, SoxR Predicted transcriptional regulators [Transcription]
COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription]
COG1710, Uncharacterized protein conserved in archaea [Function unknown]
COG2964, Uncharacterized protein conserved in bacteria [Function unknown]
COG1321, TroR Mn-dependent transcriptional regulator [Transcription]
COG2522, Predicted transcriptional regulator [General function prediction only]
COG2512, Predicted membrane-associated trancriptional regulator [Transcription]
COG1476, Predicted transcriptional regulators [Transcription]
COG3413, Predicted DNA binding protein [General function prediction only]
COG1725, Predicted transcriptional regulators [Transcription]
COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG4496, Uncharacterized protein conserved in bacteria [Function unknown]
COG1654, BirA Biotin operon repressor [Transcription]
COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair]
COG2944, Predicted transcriptional regulator [Transcription]
COG1609, PurR Transcriptional regulators [Transcription]
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription]
COG2739, Uncharacterized protein conserved in bacteria [Function unknown]
COG1522, Lrp Transcriptional regulators [Transcription]
COG1846, MarR Transcriptional regulators [Transcription]
COG3311, AlpA Predicted transcriptional regulator [Transcription]
COG5352, Uncharacterized protein conserved in bacteria [Function unknown]
COG1438, ArgR Arginine repressor [Transcription]
COG1802, GntR Transcriptional regulators [Transcription]
COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]
COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair]
COG2186, FadR Transcriptional regulators [Transcription]
COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]
COG3398, Uncharacterized protein conserved in archaea [Function unknown]
COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]
COG2188, PhnF Transcriptional regulators [Transcription]
COG1414, IclR Transcriptional regulator [Transcription]
psy17446 235 hhsearch probability: 94.47    Identity: 23%
subject length: 215   Length of aligned reigon: 43
Coverage over query: 22-64   Coverage over subject: 154-203
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]
COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription]
COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]
COG3398, Uncharacterized protein conserved in archaea [Function unknown]
COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription]
COG2345, Predicted transcriptional regulator [Transcription]
COG1438, ArgR Arginine repressor [Transcription]
COG1725, Predicted transcriptional regulators [Transcription]
COG5484, Uncharacterized conserved protein [Function unknown]
COG1321, TroR Mn-dependent transcriptional regulator [Transcription]
COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]
COG2522, Predicted transcriptional regulator [General function prediction only]
COG2964, Uncharacterized protein conserved in bacteria [Function unknown]
COG2512, Predicted membrane-associated trancriptional regulator [Transcription]
COG1654, BirA Biotin operon repressor [Transcription]
COG0789, SoxR Predicted transcriptional regulators [Transcription]
COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG3311, AlpA Predicted transcriptional regulator [Transcription]
COG2739, Uncharacterized protein conserved in bacteria [Function unknown]
COG3413, Predicted DNA binding protein [General function prediction only]
COG4566, TtrR Response regulator [Signal transduction mechanisms]
COG1710, Uncharacterized protein conserved in archaea [Function unknown]
COG5352, Uncharacterized protein conserved in bacteria [Function unknown]
COG1414, IclR Transcriptional regulator [Transcription]
COG1476, Predicted transcriptional regulators [Transcription]
COG1609, PurR Transcriptional regulators [Transcription]
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription]
COG4189, Predicted transcriptional regulator [Transcription]
COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair]
COG1378, Predicted transcriptional regulators [Transcription]
COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]
COG4496, Uncharacterized protein conserved in bacteria [Function unknown]
COG1802, GntR Transcriptional regulators [Transcription]
COG1342, Predicted DNA-binding proteins [General function prediction only]
COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair]
COG2973, TrpR Trp operon repressor [Transcription]
COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]
COG1522, Lrp Transcriptional regulators [Transcription]
COG2188, PhnF Transcriptional regulators [Transcription]
COG1846, MarR Transcriptional regulators [Transcription]
COG1318, Predicted transcriptional regulators [Transcription]
COG2944, Predicted transcriptional regulator [Transcription]
COG3355, Predicted transcriptional regulator [Transcription]
COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only]
psy262 127 hhsearch probability: 96.58    Identity: 21%
subject length: 215   Length of aligned reigon: 42
Coverage over query: 12-53   Coverage over subject: 155-203
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]
COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription]
COG1438, ArgR Arginine repressor [Transcription]
COG1321, TroR Mn-dependent transcriptional regulator [Transcription]
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]
COG1725, Predicted transcriptional regulators [Transcription]
COG5484, Uncharacterized conserved protein [Function unknown]
COG2345, Predicted transcriptional regulator [Transcription]
COG0789, SoxR Predicted transcriptional regulators [Transcription]
COG4496, Uncharacterized protein conserved in bacteria [Function unknown]
COG2512, Predicted membrane-associated trancriptional regulator [Transcription]
COG3398, Uncharacterized protein conserved in archaea [Function unknown]
COG3413, Predicted DNA binding protein [General function prediction only]
COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]
COG1522, Lrp Transcriptional regulators [Transcription]
COG0735, Fur Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]
COG2964, Uncharacterized protein conserved in bacteria [Function unknown]
COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]
COG2739, Uncharacterized protein conserved in bacteria [Function unknown]
COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription]
COG2522, Predicted transcriptional regulator [General function prediction only]
COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair]
COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription]
COG3311, AlpA Predicted transcriptional regulator [Transcription]
COG2207, AraC AraC-type DNA-binding domain-containing proteins [Transcription]
COG1414, IclR Transcriptional regulator [Transcription]
COG1476, Predicted transcriptional regulators [Transcription]
COG3355, Predicted transcriptional regulator [Transcription]
COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]
COG1378, Predicted transcriptional regulators [Transcription]
COG2186, FadR Transcriptional regulators [Transcription]
COG1846, MarR Transcriptional regulators [Transcription]
COG4189, Predicted transcriptional regulator [Transcription]
COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription]
COG1710, Uncharacterized protein conserved in archaea [Function unknown]
COG1802, GntR Transcriptional regulators [Transcription]
psy18214 151 hhsearch probability: 90.98    Identity: 18%
subject length: 215   Length of aligned reigon: 45
Coverage over query: 47-91   Coverage over subject: 154-204
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG0789, SoxR Predicted transcriptional regulators [Transcription]
COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription]
COG1342, Predicted DNA-binding proteins [General function prediction only]
COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]
COG3423, Nlp Predicted transcriptional regulator [Transcription]
COG3311, AlpA Predicted transcriptional regulator [Transcription]
COG1309, AcrR Transcriptional regulator [Transcription]
COG1710, Uncharacterized protein conserved in archaea [Function unknown]
COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair]
COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]
COG4800, Predicted transcriptional regulator with an HTH domain [Transcription]
COG3413, Predicted DNA binding protein [General function prediction only]
COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
psy5506 257 hhsearch probability: 92.05    Identity: 16%
subject length: 215   Length of aligned reigon: 43
Coverage over query: 58-101   Coverage over subject: 155-202
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG3398, Uncharacterized protein conserved in archaea [Function unknown]
COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]
COG1522, Lrp Transcriptional regulators [Transcription]
COG1710, Uncharacterized protein conserved in archaea [Function unknown]
COG3355, Predicted transcriptional regulator [Transcription]
COG1321, TroR Mn-dependent transcriptional regulator [Transcription]
COG1737, RpiR Transcriptional regulators [Transcription]
COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]
COG1508, RpoN DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog [Transcription]
COG1725, Predicted transcriptional regulators [Transcription]
COG1438, ArgR Arginine repressor [Transcription]
COG3413, Predicted DNA binding protein [General function prediction only]
COG2512, Predicted membrane-associated trancriptional regulator [Transcription]
COG2169, Ada Adenosine deaminase [Nucleotide transport and metabolism]
COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]
psy16048 104 hhsearch probability: 95.93    Identity: 15%
subject length: 215   Length of aligned reigon: 46
Coverage over query: 9-54   Coverage over subject: 153-204
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG0789, SoxR Predicted transcriptional regulators [Transcription]
COG3311, AlpA Predicted transcriptional regulator [Transcription]
COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription]
COG1309, AcrR Transcriptional regulator [Transcription]
COG1342, Predicted DNA-binding proteins [General function prediction only]
COG3413, Predicted DNA binding protein [General function prediction only]
COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]
COG4800, Predicted transcriptional regulator with an HTH domain [Transcription]
COG3829, RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]
COG2739, Uncharacterized protein conserved in bacteria [Function unknown]
COG3423, Nlp Predicted transcriptional regulator [Transcription]
COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
COG1522, Lrp Transcriptional regulators [Transcription]
COG2522, Predicted transcriptional regulator [General function prediction only]
COG2378, Predicted transcriptional regulator [Transcription]
COG1710, Uncharacterized protein conserved in archaea [Function unknown]
COG2186, FadR Transcriptional regulators [Transcription]
COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
COG1414, IclR Transcriptional regulator [Transcription]
COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair]
COG3355, Predicted transcriptional regulator [Transcription]
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]
COG2512, Predicted membrane-associated trancriptional regulator [Transcription]
COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only]
COG2964, Uncharacterized protein conserved in bacteria [Function unknown]
COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]
psy13727 218 hhsearch probability: 94.63    Identity: 15%
subject length: 215   Length of aligned reigon: 41
Coverage over query: 18-58   Coverage over subject: 155-202
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG0789, SoxR Predicted transcriptional regulators [Transcription]
COG3311, AlpA Predicted transcriptional regulator [Transcription]
COG3413, Predicted DNA binding protein [General function prediction only]
COG1342, Predicted DNA-binding proteins [General function prediction only]
COG2522, Predicted transcriptional regulator [General function prediction only]
COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]
COG1710, Uncharacterized protein conserved in archaea [Function unknown]
COG4800, Predicted transcriptional regulator with an HTH domain [Transcription]
psy9016 104 hhsearch probability: 94.82    Identity: 17%
subject length: 215   Length of aligned reigon: 30
Coverage over query: 56-85   Coverage over subject: 173-202
COG1522, Lrp Transcriptional regulators [Transcription]
COG3355, Predicted transcriptional regulator [Transcription]
COG3413, Predicted DNA binding protein [General function prediction only]
COG1414, IclR Transcriptional regulator [Transcription]
COG1710, Uncharacterized protein conserved in archaea [Function unknown]
COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]
COG1737, RpiR Transcriptional regulators [Transcription]
COG3311, AlpA Predicted transcriptional regulator [Transcription]
COG3283, TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism]
COG1510, Predicted transcriptional regulators [Transcription]
COG1438, ArgR Arginine repressor [Transcription]
COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]
COG1321, TroR Mn-dependent transcriptional regulator [Transcription]
COG3398, Uncharacterized protein conserved in archaea [Function unknown]
COG1309, AcrR Transcriptional regulator [Transcription]
COG1342, Predicted DNA-binding proteins [General function prediction only]
COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG2512, Predicted membrane-associated trancriptional regulator [Transcription]
COG1654, BirA Biotin operon repressor [Transcription]
psy1554 296 hhsearch probability: 91.28    Identity: 31%
subject length: 215   Length of aligned reigon: 48
Coverage over query: 12-59   Coverage over subject: 154-209
COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG2739, Uncharacterized protein conserved in bacteria [Function unknown]
COG2826, Tra8 Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]
COG3413, Predicted DNA binding protein [General function prediction only]
psy452 116 hhsearch probability: 90.43    Identity: 13%
subject length: 215   Length of aligned reigon: 30
Coverage over query: 14-43   Coverage over subject: 180-209
COG2739, Uncharacterized protein conserved in bacteria [Function unknown]
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG3413, Predicted DNA binding protein [General function prediction only]
psy15954 81 hhsearch probability: 96.36    Identity: 26%
subject length: 215   Length of aligned reigon: 27
Coverage over query: 2-28   Coverage over subject: 174-200
COG1522, Lrp Transcriptional regulators [Transcription]
COG3413, Predicted DNA binding protein [General function prediction only]
COG3355, Predicted transcriptional regulator [Transcription]
COG2512, Predicted membrane-associated trancriptional regulator [Transcription]
COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
COG1654, BirA Biotin operon repressor [Transcription]
COG1737, RpiR Transcriptional regulators [Transcription]
COG1321, TroR Mn-dependent transcriptional regulator [Transcription]
COG1414, IclR Transcriptional regulator [Transcription]
COG3311, AlpA Predicted transcriptional regulator [Transcription]
COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]
COG2207, AraC AraC-type DNA-binding domain-containing proteins [Transcription]
COG3093, VapI Plasmid maintenance system antidote protein [General function prediction only]
COG3284, AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription]
COG1342, Predicted DNA-binding proteins [General function prediction only]
COG3283, TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism]
COG1609, PurR Transcriptional regulators [Transcription]
COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]
COG3398, Uncharacterized protein conserved in archaea [Function unknown]
COG1309, AcrR Transcriptional regulator [Transcription]
COG1725, Predicted transcriptional regulators [Transcription]
COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
COG3877, Uncharacterized protein conserved in bacteria [Function unknown]
COG2964, Uncharacterized protein conserved in bacteria [Function unknown]
COG4565, CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]
COG2739, Uncharacterized protein conserved in bacteria [Function unknown]
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription]
psy5355 76 hhsearch probability: 94.14    Identity: 18%
subject length: 215   Length of aligned reigon: 49
Coverage over query: 15-65   Coverage over subject: 155-206
COG5576, Homeodomain-containing transcription factor [Transcription]
COG3413, Predicted DNA binding protein [General function prediction only]
psy14727 67 hhsearch probability: 92.29    Identity: 27%
subject length: 215   Length of aligned reigon: 37
Coverage over query: 28-64   Coverage over subject: 155-193
COG5576, Homeodomain-containing transcription factor [Transcription]
COG3413, Predicted DNA binding protein [General function prediction only]
psy13127 64 hhsearch probability: 91.48    Identity: 22%
subject length: 215   Length of aligned reigon: 37
Coverage over query: 26-62   Coverage over subject: 155-193
COG5576, Homeodomain-containing transcription factor [Transcription]
COG3413, Predicted DNA binding protein [General function prediction only]
psy16192 60 hhsearch probability: 92.06    Identity: 21%
subject length: 215   Length of aligned reigon: 43
Coverage over query: 15-57   Coverage over subject: 151-195
COG5576, Homeodomain-containing transcription factor [Transcription]
COG3413, Predicted DNA binding protein [General function prediction only]
COG4367, Uncharacterized protein conserved in bacteria [Function unknown]