List of proteins associated with COG cluster: COG3904   Predicted periplasmic protein [Function unknown]
Protein ID
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analysis report

Similarity with COG COG3904
All predicted COG clusters
psy9397 526 hhsearch probability: 91.85    Identity: 16%
subject length: 245   Length of aligned reigon: 80
Coverage over query: 287-371   Coverage over subject: 92-172
COG0616, SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]
COG1024, CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
COG0740, ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG1030, NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
COG0447, MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]
COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown]
COG0825, AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis]
COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis]
COG0777, AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]
COG2501, S4-like RNA binding protein [Replication, recombination, and repair]
COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis]
COG3904, Predicted periplasmic protein [Function unknown]
psy18232 486 hhsearch probability: 93.53    Identity: 22%
subject length: 245   Length of aligned reigon: 97
Coverage over query: 67-168   Coverage over subject: 72-171
COG0740, ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG1030, NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
COG0616, SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG3904, Predicted periplasmic protein [Function unknown]
COG1024, CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
COG0825, AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
psy5228 114 hhsearch probability: 96.43    Identity: 13%
subject length: 245   Length of aligned reigon: 92
Coverage over query: 13-108   Coverage over subject: 140-236
COG0740, ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG1030, NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
COG0616, SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
COG1024, CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
COG0825, AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
COG3904, Predicted periplasmic protein [Function unknown]
COG0447, MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]