| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG4240 |
All predicted COG clusters |
|---|---|---|---|
| psy9640 | 199 | hhsearch probability: 98.07 Identity: 28% subject length: 300 Length of aligned reigon: 83 Coverage over query: 50-132 Coverage over subject: 46-141 |
COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG5265, ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG4161, ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism] COG4778, PhnL ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1137, YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only] COG4133, CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] COG4148, ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4674, Uncharacterized ABC-type transport system, ATPase component [General function prediction only] COG0035, Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism] COG2401, ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only] COG4138, BtuD ABC-type cobalamin transport system, ATPase component [Coenzyme metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG1245, Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only] COG4170, SapD ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG1129, MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] COG0178, UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair] COG4240, Predicted kinase [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] |
| psy3764 | 354 | hhsearch probability: 96.07 Identity: 28% subject length: 300 Length of aligned reigon: 32 Coverage over query: 1-32 Coverage over subject: 52-84 |
COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG2326, Uncharacterized conserved protein [Function unknown] COG4639, Predicted kinase [General function prediction only] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3911, Predicted ATPase [General function prediction only] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1855, ATPase (PilT family) [General function prediction only] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG1466, HolA DNA polymerase III, delta subunit [DNA replication, recombination, and repair] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG4240, Predicted kinase [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] |
| psy17046 | 334 | hhsearch probability: 98.61 Identity: 25% subject length: 300 Length of aligned reigon: 105 Coverage over query: 45-150 Coverage over subject: 47-177 |
COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG1137, YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1129, MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG4674, Uncharacterized ABC-type transport system, ATPase component [General function prediction only] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG4133, CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG4148, ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG4161, ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism] COG4138, BtuD ABC-type cobalamin transport system, ATPase component [Coenzyme metabolism] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG4240, Predicted kinase [General function prediction only] COG4778, PhnL ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG5265, ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] |
| psy11031 | 520 | hhsearch probability: 93.02 Identity: 28% subject length: 300 Length of aligned reigon: 40 Coverage over query: 223-262 Coverage over subject: 48-92 |
COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG4639, Predicted kinase [General function prediction only] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG2087, CobU Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase [Coenzyme metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG3911, Predicted ATPase [General function prediction only] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1855, ATPase (PilT family) [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG4240, Predicted kinase [General function prediction only] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG1220, HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] |
| psy9384 | 978 | hhsearch probability: 94.11 Identity: 33% subject length: 300 Length of aligned reigon: 39 Coverage over query: 20-63 Coverage over subject: 38-76 |
COG0666, Arp FOG: Ankyrin repeat [General function prediction only] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG3899, Predicted ATPase [General function prediction only] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG3267, ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG3911, Predicted ATPase [General function prediction only] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG4240, Predicted kinase [General function prediction only] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] |
| psy5032 | 193 | hhsearch probability: 94.36 Identity: 17% subject length: 300 Length of aligned reigon: 30 Coverage over query: 15-44 Coverage over subject: 49-78 |
COG1159, Era GTPase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1162, Predicted GTPases [General function prediction only] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] COG1161, Predicted GTPases [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG0486, ThdF Predicted GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG4240, Predicted kinase [General function prediction only] COG2262, HflX GTPases [General function prediction only] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] |
| psy11030 | 153 | hhsearch probability: 95.80 Identity: 34% subject length: 300 Length of aligned reigon: 32 Coverage over query: 1-32 Coverage over subject: 58-95 |
COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG4639, Predicted kinase [General function prediction only] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG4185, Uncharacterized protein conserved in bacteria [Function unknown] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG0714, MoxR-like ATPases [General function prediction only] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1855, ATPase (PilT family) [General function prediction only] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG0802, Predicted ATPase or kinase [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4240, Predicted kinase [General function prediction only] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG0465, HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] COG0542, clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy3484 | 257 | hhsearch probability: 97.07 Identity: 26% subject length: 300 Length of aligned reigon: 42 Coverage over query: 2-46 Coverage over subject: 52-93 |
COG4639, Predicted kinase [General function prediction only] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG4185, Uncharacterized protein conserved in bacteria [Function unknown] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1855, ATPase (PilT family) [General function prediction only] COG3911, Predicted ATPase [General function prediction only] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG4240, Predicted kinase [General function prediction only] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG5324, Uncharacterized conserved protein [Function unknown] |
| psy14655 | 261 | hhsearch probability: 94.15 Identity: 22% subject length: 300 Length of aligned reigon: 36 Coverage over query: 2-38 Coverage over subject: 54-89 |
COG1192, Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG2894, MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] COG0489, Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG1348, NifH Nitrogenase subunit NifH (ATPase) [Inorganic ion transport and metabolism] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG0003, ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0132, BioD Dethiobiotin synthetase [Coenzyme metabolism] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1797, CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG1159, Era GTPase [General function prediction only] COG1492, CobQ Cobyric acid synthase [Coenzyme metabolism] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG3598, RepA RecA-family ATPase [DNA replication, recombination, and repair] COG0523, Putative GTPases (G3E family) [General function prediction only] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG2109, BtuR ATP:corrinoid adenosyltransferase [Coenzyme metabolism] COG4240, Predicted kinase [General function prediction only] COG5623, CLP1 Predicted GTPase subunit of the pre-mRNA cleavage complex [Translation, ribosomal structure and biogenesis] COG3367, Uncharacterized conserved protein [Function unknown] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG2403, Predicted GTPase [General function prediction only] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG1855, ATPase (PilT family) [General function prediction only] COG1663, LpxK Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG0305, DnaB Replicative DNA helicase [DNA replication, recombination, and repair] COG2759, MIS1 Formyltetrahydrofolate synthetase [Nucleotide transport and metabolism] |
| psy9244 | 119 | hhsearch probability: 97.58 Identity: 29% subject length: 300 Length of aligned reigon: 41 Coverage over query: 15-55 Coverage over subject: 48-94 |
COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG4639, Predicted kinase [General function prediction only] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG1855, ATPase (PilT family) [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4240, Predicted kinase [General function prediction only] COG3911, Predicted ATPase [General function prediction only] COG1220, HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG0714, MoxR-like ATPases [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG0542, clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] |
| psy6801 | 228 | hhsearch probability: 97.20 Identity: 28% subject length: 300 Length of aligned reigon: 40 Coverage over query: 6-45 Coverage over subject: 49-94 |
COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG4639, Predicted kinase [General function prediction only] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG4185, Uncharacterized protein conserved in bacteria [Function unknown] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG1220, HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3911, Predicted ATPase [General function prediction only] COG4240, Predicted kinase [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1855, ATPase (PilT family) [General function prediction only] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1224, TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0714, MoxR-like ATPases [General function prediction only] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG0802, Predicted ATPase or kinase [General function prediction only] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] |
| psy4311 | 190 | hhsearch probability: 98.28 Identity: 23% subject length: 300 Length of aligned reigon: 56 Coverage over query: 96-151 Coverage over subject: 45-101 |
COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0411, LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1129, MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1137, YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG4133, CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] COG1135, AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG1101, PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1119, ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG4674, Uncharacterized ABC-type transport system, ATPase component [General function prediction only] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG4240, Predicted kinase [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4107, PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG4618, ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] COG4167, SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG4615, PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] COG4138, BtuD ABC-type cobalamin transport system, ATPase component [Coenzyme metabolism] COG0488, Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG0444, DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG4988, CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG4987, CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG4148, ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG4778, PhnL ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] |
| psy9392 | 168 | hhsearch probability: 96.11 Identity: 18% subject length: 300 Length of aligned reigon: 33 Coverage over query: 27-60 Coverage over subject: 46-78 |
COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG4098, comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair] COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] COG1198, PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] COG1643, HrpA HrpA-like helicases [DNA replication, recombination, and repair] COG1197, Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription] COG4096, HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG0210, UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG1061, SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG0714, MoxR-like ATPases [General function prediction only] COG0593, DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1444, Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG3854, SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1204, Superfamily II helicase [General function prediction only] COG0542, clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] COG4240, Predicted kinase [General function prediction only] COG0507, RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0465, HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] COG1074, RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] COG1702, PhoH Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms] COG1855, ATPase (PilT family) [General function prediction only] COG3267, ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] COG3973, Superfamily I DNA and RNA helicases [General function prediction only] COG1199, DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1435, Tdk Thymidine kinase [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG2607, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG1111, MPH1 ERCC4-like helicases [DNA replication, recombination, and repair] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG1201, Lhr Lhr-like helicases [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG4962, CpaF Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG3911, Predicted ATPase [General function prediction only] COG4650, RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] COG3972, Superfamily I DNA and RNA helicases [General function prediction only] COG2204, AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] |
| psy16874 | 227 | hhsearch probability: 97.29 Identity: 21% subject length: 300 Length of aligned reigon: 39 Coverage over query: 5-43 Coverage over subject: 47-86 |
COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG2326, Uncharacterized conserved protein [Function unknown] COG3911, Predicted ATPase [General function prediction only] COG4639, Predicted kinase [General function prediction only] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1855, ATPase (PilT family) [General function prediction only] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG4240, Predicted kinase [General function prediction only] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0802, Predicted ATPase or kinase [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] |
| psy14904 | 233 | hhsearch probability: 96.30 Identity: 18% subject length: 300 Length of aligned reigon: 33 Coverage over query: 8-41 Coverage over subject: 52-85 |
COG0132, BioD Dethiobiotin synthetase [Coenzyme metabolism] COG1797, CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] COG2894, MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] COG0489, Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] COG1192, Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG1492, CobQ Cobyric acid synthase [Coenzyme metabolism] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0857, Pta BioD-like N-terminal domain of phosphotransacetylase [General function prediction only] COG1348, NifH Nitrogenase subunit NifH (ATPase) [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0003, ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG3367, Uncharacterized conserved protein [Function unknown] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG2403, Predicted GTPase [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG2109, BtuR ATP:corrinoid adenosyltransferase [Coenzyme metabolism] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG4240, Predicted kinase [General function prediction only] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG1435, Tdk Thymidine kinase [Nucleotide transport and metabolism] COG1159, Era GTPase [General function prediction only] COG1855, ATPase (PilT family) [General function prediction only] COG0504, PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1663, LpxK Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG1160, Predicted GTPases [General function prediction only] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG3911, Predicted ATPase [General function prediction only] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG2759, MIS1 Formyltetrahydrofolate synthetase [Nucleotide transport and metabolism] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG1110, Reverse gyrase [DNA replication, recombination, and repair] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] |
| psy17388 | 272 | hhsearch probability: 97.54 Identity: 27% subject length: 300 Length of aligned reigon: 44 Coverage over query: 20-63 Coverage over subject: 48-92 |
COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG2046, MET3 ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG4639, Predicted kinase [General function prediction only] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG4185, Uncharacterized protein conserved in bacteria [Function unknown] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG4240, Predicted kinase [General function prediction only] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG1855, ATPase (PilT family) [General function prediction only] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3911, Predicted ATPase [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG0802, Predicted ATPase or kinase [General function prediction only] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] |
| psy9977 | 192 | hhsearch probability: 97.22 Identity: 34% subject length: 300 Length of aligned reigon: 41 Coverage over query: 5-45 Coverage over subject: 48-89 |
COG0489, Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] COG2894, MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] COG1192, Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG1348, NifH Nitrogenase subunit NifH (ATPase) [Inorganic ion transport and metabolism] COG0003, ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0132, BioD Dethiobiotin synthetase [Coenzyme metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1797, CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] COG1492, CobQ Cobyric acid synthase [Coenzyme metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG2403, Predicted GTPase [General function prediction only] COG1159, Era GTPase [General function prediction only] COG1160, Predicted GTPases [General function prediction only] COG0857, Pta BioD-like N-terminal domain of phosphotransacetylase [General function prediction only] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] COG0523, Putative GTPases (G3E family) [General function prediction only] COG3367, Uncharacterized conserved protein [Function unknown] COG4240, Predicted kinase [General function prediction only] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG3598, RepA RecA-family ATPase [DNA replication, recombination, and repair] COG0504, PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG2874, FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1663, LpxK Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane] COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis] COG2109, BtuR ATP:corrinoid adenosyltransferase [Coenzyme metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1435, Tdk Thymidine kinase [Nucleotide transport and metabolism] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG2804, PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] |
| psy7186 | 135 | hhsearch probability: 98.33 Identity: 26% subject length: 300 Length of aligned reigon: 42 Coverage over query: 1-42 Coverage over subject: 52-93 |
COG4639, Predicted kinase [General function prediction only] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG4185, Uncharacterized protein conserved in bacteria [Function unknown] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG4240, Predicted kinase [General function prediction only] COG3911, Predicted ATPase [General function prediction only] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG1855, ATPase (PilT family) [General function prediction only] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG2805, PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4604, CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG2255, RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] COG0802, Predicted ATPase or kinase [General function prediction only] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG4175, ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG2812, DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG0396, sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] |
| psy2713 | 143 | hhsearch probability: 98.44 Identity: 24% subject length: 300 Length of aligned reigon: 42 Coverage over query: 5-46 Coverage over subject: 49-91 |
COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG4639, Predicted kinase [General function prediction only] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0645, Predicted kinase [General function prediction only] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG4185, Uncharacterized protein conserved in bacteria [Function unknown] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG4240, Predicted kinase [General function prediction only] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1855, ATPase (PilT family) [General function prediction only] COG1222, RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG0470, HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] COG1100, GTPase SAR1 and related small G proteins [General function prediction only] COG0802, Predicted ATPase or kinase [General function prediction only] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1220, HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3911, Predicted ATPase [General function prediction only] COG4136, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG0489, Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] |
| psy9979 | 65 | hhsearch probability: 97.89 Identity: 31% subject length: 300 Length of aligned reigon: 45 Coverage over query: 4-48 Coverage over subject: 47-93 |
COG1192, Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG0489, Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] COG2894, MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] COG0455, flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] COG0003, ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG1348, NifH Nitrogenase subunit NifH (ATPase) [Inorganic ion transport and metabolism] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG1484, DnaC DNA replication protein [DNA replication, recombination, and repair] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0467, RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG4240, Predicted kinase [General function prediction only] COG4963, CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG1855, ATPase (PilT family) [General function prediction only] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0132, BioD Dethiobiotin synthetase [Coenzyme metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG0468, RecA RecA/RadA recombinase [DNA replication, recombination, and repair] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG1797, CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG1066, Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] COG2403, Predicted GTPase [General function prediction only] COG3911, Predicted ATPase [General function prediction only] COG2256, MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG5623, CLP1 Predicted GTPase subunit of the pre-mRNA cleavage complex [Translation, ribosomal structure and biogenesis] COG0305, DnaB Replicative DNA helicase [DNA replication, recombination, and repair] COG1474, CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] |
| psy5031 | 281 | hhsearch probability: 91.51 Identity: 24% subject length: 300 Length of aligned reigon: 29 Coverage over query: 56-84 Coverage over subject: 50-78 |
COG1159, Era GTPase [General function prediction only] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1084, Predicted GTPase [General function prediction only] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1161, Predicted GTPases [General function prediction only] COG3172, NadR Predicted ATPase/kinase involved in NAD metabolism [Coenzyme metabolism] COG4240, Predicted kinase [General function prediction only] COG3596, Predicted GTPase [General function prediction only] COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] |
| psy9618 | 542 | hhsearch probability: 99.20 Identity: 25% subject length: 300 Length of aligned reigon: 126 Coverage over query: 29-159 Coverage over subject: 39-177 |
COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG0283, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG1102, Cmk Cytidylate kinase [Nucleotide transport and metabolism] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism] COG4240, Predicted kinase [General function prediction only] COG0703, AroK Shikimate kinase [Amino acid transport and metabolism] COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] COG3265, GntK Gluconate kinase [Carbohydrate transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism] COG0035, Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism] COG3954, PrkB Phosphoribulokinase [Energy production and conversion] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG2074, 2-phosphoglycerate kinase [Carbohydrate transport and metabolism] COG0125, Tmk Thymidylate kinase [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG1660, Predicted P-loop-containing kinase [General function prediction only] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism] COG4639, Predicted kinase [General function prediction only] COG0645, Predicted kinase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG3896, Chloramphenicol 3-O-phosphotransferase [Defense mechanisms] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG0324, MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG1219, ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] COG3911, Predicted ATPase [General function prediction only] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG0802, Predicted ATPase or kinase [General function prediction only] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] COG1855, ATPase (PilT family) [General function prediction only] COG3640, CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] COG0466, Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG0542, clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] COG0464, SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] |
| psy11490 | 147 | hhsearch probability: 98.62 Identity: 15% subject length: 300 Length of aligned reigon: 104 Coverage over query: 22-127 Coverage over subject: 46-173 |
COG0572, Udk Uridine kinase [Nucleotide transport and metabolism] COG2019, AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism] COG1072, CoaA Panthothenate kinase [Coenzyme metabolism] COG4240, Predicted kinase [General function prediction only] COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] COG1126, GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] COG0529, CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] COG1136, SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] COG1120, FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] COG1763, MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] COG1116, TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] COG1121, ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] COG1124, DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] COG1131, CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] COG3839, MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] COG1127, Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG3842, PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] COG3840, ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] COG2884, FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] COG1125, OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] COG1341, Predicted GTPase or GTP-binding protein [General function prediction only] COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG0563, Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4559, ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] COG0541, Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] COG1117, PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] COG2274, SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] COG1419, FlhF Flagellar GTP-binding protein [Cell motility and secretion] COG4608, AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] COG0552, FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only] COG4088, Predicted nucleotide kinase [Nucleotide transport and metabolism] COG1132, MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] COG1122, CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] COG1118, CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] COG4555, NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] COG4598, HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] COG1134, TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] COG0237, CoaE Dephospho-CoA kinase [Coenzyme metabolism] COG4525, TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] COG0410, LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] |