List of proteins associated with COG cluster: COG5104   PRP40 Splicing factor [RNA processing and modification]
Protein ID
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analysis report

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analysis report

Similarity with COG COG5104
All predicted COG clusters
psy4246 328 hhsearch probability: 95.33    Identity: 42%
subject length: 590   Length of aligned reigon: 33
Coverage over query: 19-51   Coverage over subject: 56-88
COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
COG0300, DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
COG3967, DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
COG1028, FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
COG0623, FabI Enoyl-[acyl-carrier-protein]
COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
COG1088, RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
COG1087, GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
COG0451, WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
COG1091, RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
COG1089, Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
COG1748, LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
COG4982, 3-oxoacyl-[acyl-carrier protein]
COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
COG2910, Putative NADH-flavin reductase [General function prediction only]
COG3268, Uncharacterized conserved protein [Function unknown]
COG0604, Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
COG0169, AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
COG1064, AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
COG2227, UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
COG0373, HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
COG3007, Uncharacterized paraquat-inducible protein B [Function unknown]
COG5104, PRP40 Splicing factor [RNA processing and modification]
COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]
COG2263, Predicted RNA methylase [Translation, ribosomal structure and biogenesis]
COG5322, Predicted dehydrogenase [General function prediction only]
psy12836 429 hhsearch probability: 94.81    Identity: 19%
subject length: 590   Length of aligned reigon: 58
Coverage over query: 19-80   Coverage over subject: 11-74
COG1028, FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
COG0300, DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
COG3967, DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
COG0623, FabI Enoyl-[acyl-carrier-protein]
COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
COG1087, GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
COG1088, RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
COG0451, WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
COG1091, RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
COG1089, Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
COG4982, 3-oxoacyl-[acyl-carrier protein]
COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
COG1748, LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
COG2910, Putative NADH-flavin reductase [General function prediction only]
COG0604, Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
COG3268, Uncharacterized conserved protein [Function unknown]
COG0169, AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]
COG0569, TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
COG1064, AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
COG0373, HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
COG3007, Uncharacterized paraquat-inducible protein B [Function unknown]
COG5104, PRP40 Splicing factor [RNA processing and modification]
COG0039, Mdh Malate/lactate dehydrogenases [Energy production and conversion]
COG4123, Predicted O-methyltransferase [General function prediction only]
psy6554 1435 hhsearch probability: 97.30    Identity: 17%
subject length: 590   Length of aligned reigon: 207
Coverage over query: 304-570   Coverage over subject: 190-420
COG1159, Era GTPase [General function prediction only]
COG1100, GTPase SAR1 and related small G proteins [General function prediction only]
COG1160, Predicted GTPases [General function prediction only]
COG0486, ThdF Predicted GTPase [General function prediction only]
COG1084, Predicted GTPase [General function prediction only]
COG0370, FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism]
COG0218, Predicted GTPase [General function prediction only]
COG2262, HflX GTPases [General function prediction only]
COG0536, Obg Predicted GTPase [General function prediction only]
COG2229, Predicted GTPase [General function prediction only]
COG1163, DRG Predicted GTPase [General function prediction only]
COG4917, EutP Ethanolamine utilization protein [Amino acid transport and metabolism]
COG3596, Predicted GTPase [General function prediction only]
COG0532, InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis]
COG5256, TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
COG0481, LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane]
COG0378, HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription]
COG0012, Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis]
COG5257, GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis]
COG2895, CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism]
COG5258, GTPBP1 GTPase [General function prediction only]
COG1217, TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms]
COG3276, SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis]
COG5104, PRP40 Splicing factor [RNA processing and modification]
COG5019, CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton]
COG1703, ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
COG0050, TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis]
COG0480, FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis]
COG1161, Predicted GTPases [General function prediction only]
COG4108, PrfC Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis]
COG5192, BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis]
COG3523, IcmF Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport]
COG0523, Putative GTPases (G3E family) [General function prediction only]
COG1162, Predicted GTPases [General function prediction only]
COG1618, Predicted nucleotide kinase [Nucleotide transport and metabolism]
psy11386 582 hhsearch probability: 90.93    Identity: 20%
subject length: 590   Length of aligned reigon: 61
Coverage over query: 85-169   Coverage over subject: 15-75
COG5021, HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
COG5038, Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
COG5104, PRP40 Splicing factor [RNA processing and modification]
psy16327 994 hhsearch probability: 98.37    Identity: 32%
subject length: 590   Length of aligned reigon: 72
Coverage over query: 408-543   Coverage over subject: 15-86
COG5021, HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
COG5104, PRP40 Splicing factor [RNA processing and modification]
COG5038, Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
psy6910 1145 hhsearch probability: 97.92    Identity: 21%
subject length: 590   Length of aligned reigon: 70
Coverage over query: 298-374   Coverage over subject: 15-86
COG0194, Gmk Guanylate kinase [Nucleotide transport and metabolism]
COG3709, Uncharacterized component of phosphonate metabolism [Inorganic ion transport and metabolism]
COG5104, PRP40 Splicing factor [RNA processing and modification]
COG0793, Prc Periplasmic protease [Cell envelope biogenesis, outer membrane]
COG3480, SdrC Predicted secreted protein containing a PDZ domain [Signal transduction mechanisms]
COG0265, DegQ Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones]
COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only]
COG3031, PulC Type II secretory pathway, component PulC [Intracellular trafficking and secretion]
psy3114 515 hhsearch probability: 91.71    Identity: 30%
subject length: 590   Length of aligned reigon: 27
Coverage over query: 363-389   Coverage over subject: 16-42
COG5599, PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms]
COG2453, CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
COG5350, Predicted protein tyrosine phosphatase [General function prediction only]
COG3453, Uncharacterized protein conserved in bacteria [Function unknown]
COG2365, Protein tyrosine/serine phosphatase [Signal transduction mechanisms]
COG5104, PRP40 Splicing factor [RNA processing and modification]
psy5904 593 hhsearch probability: 90.24    Identity: 15%
subject length: 590   Length of aligned reigon: 72
Coverage over query: 380-478   Coverage over subject: 17-88
COG5021, HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
COG5104, PRP40 Splicing factor [RNA processing and modification]
psy2339 125 hhsearch probability: 96.86    Identity: 29%
subject length: 590   Length of aligned reigon: 28
Coverage over query: 75-102   Coverage over subject: 15-42
COG5104, PRP40 Splicing factor [RNA processing and modification]
COG5021, HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
psy8387 176 hhsearch probability: 95.96    Identity: 24%
subject length: 590   Length of aligned reigon: 29
Coverage over query: 127-155   Coverage over subject: 14-42
COG5104, PRP40 Splicing factor [RNA processing and modification]
COG5021, HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
psy4253 108 hhsearch probability: 92.17    Identity: 33%
subject length: 590   Length of aligned reigon: 30
Coverage over query: 69-98   Coverage over subject: 56-85
COG5104, PRP40 Splicing factor [RNA processing and modification]
psy14127 76 hhsearch probability: 93.26    Identity: 24%
subject length: 590   Length of aligned reigon: 55
Coverage over query: 12-66   Coverage over subject: 17-73
COG5104, PRP40 Splicing factor [RNA processing and modification]
psy9283 242 hhsearch probability: 98.67    Identity: 19%
subject length: 590   Length of aligned reigon: 111
Coverage over query: 77-199   Coverage over subject: 148-269
COG5104, PRP40 Splicing factor [RNA processing and modification]
psy16171 95 hhsearch probability: 95.26    Identity: 19%
subject length: 590   Length of aligned reigon: 59
Coverage over query: 23-81   Coverage over subject: 22-85
COG5104, PRP40 Splicing factor [RNA processing and modification]
psy10976 888 hhsearch probability: 92.00    Identity: 8%
subject length: 590   Length of aligned reigon: 24
Coverage over query: 519-542   Coverage over subject: 19-42
COG5104, PRP40 Splicing factor [RNA processing and modification]
psy9242 455 hhsearch probability: 92.11    Identity: 37%
subject length: 590   Length of aligned reigon: 30
Coverage over query: 6-36   Coverage over subject: 15-44
COG5104, PRP40 Splicing factor [RNA processing and modification]
psy9291 396 hhsearch probability: 97.69    Identity: 28%
subject length: 590   Length of aligned reigon: 64
Coverage over query: 265-341   Coverage over subject: 25-88
COG5104, PRP40 Splicing factor [RNA processing and modification]
psy9971 753 hhsearch probability: 99.93    Identity: 20%
subject length: 590   Length of aligned reigon: 193
Coverage over query: 207-403   Coverage over subject: 215-424
COG5104, PRP40 Splicing factor [RNA processing and modification]
psy9286 218 hhsearch probability: 99.42    Identity: 18%
subject length: 590   Length of aligned reigon: 79
Coverage over query: 137-215   Coverage over subject: 215-295
COG5104, PRP40 Splicing factor [RNA processing and modification]