List of proteins associated with COG cluster: COG5333   CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
Protein ID
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analysis report

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analysis report

Similarity with COG COG5333
All predicted COG clusters
psy6534 309 hhsearch probability: 94.71    Identity: 17%
subject length: 297   Length of aligned reigon: 83
Coverage over query: 206-288   Coverage over subject: 50-140
COG1405, SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
COG5024, Cyclin [Cell division and chromosome partitioning]
COG2051, RPS27A Ribosomal protein S27E [Translation, ribosomal structure and biogenesis]
COG1645, Uncharacterized Zn-finger containing protein [General function prediction only]
COG1997, RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
COG1998, RPS31 Ribosomal protein S27AE [Translation, ribosomal structure and biogenesis]
COG2835, Uncharacterized conserved protein [Function unknown]
COG4888, Uncharacterized Zn ribbon-containing protein [General function prediction only]
COG2824, PhnA Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism]
COG3478, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain [General function prediction only]
COG2888, Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]
psy2129 498 hhsearch probability: 92.37    Identity: 19%
subject length: 297   Length of aligned reigon: 62
Coverage over query: 229-290   Coverage over subject: 42-103
COG1405, SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
COG5024, Cyclin [Cell division and chromosome partitioning]
psy14721 349 hhsearch probability: 90.04    Identity: 16%
subject length: 297   Length of aligned reigon: 115
Coverage over query: 235-349   Coverage over subject: 43-203
COG5024, Cyclin [Cell division and chromosome partitioning]
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
psy1861 661 hhsearch probability: 98.49    Identity: 19%
subject length: 297   Length of aligned reigon: 145
Coverage over query: 244-389   Coverage over subject: 46-198
COG1405, SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
COG5030, APS2 Clathrin adaptor complex, small subunit [Intracellular trafficking and secretion]
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
COG5024, Cyclin [Cell division and chromosome partitioning]
psy4534 644 hhsearch probability: 95.48    Identity: 20%
subject length: 297   Length of aligned reigon: 94
Coverage over query: 497-592   Coverage over subject: 50-148
COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
COG5024, Cyclin [Cell division and chromosome partitioning]
psy1796 312 hhsearch probability: 96.10    Identity: 20%
subject length: 297   Length of aligned reigon: 64
Coverage over query: 247-311   Coverage over subject: 79-148
COG5024, Cyclin [Cell division and chromosome partitioning]
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
psy14722 87 hhsearch probability: 97.68    Identity: 21%
subject length: 297   Length of aligned reigon: 57
Coverage over query: 31-87   Coverage over subject: 43-99
COG5024, Cyclin [Cell division and chromosome partitioning]
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
COG1405, SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
psy16565 377 hhsearch probability: 94.54    Identity: 22%
subject length: 297   Length of aligned reigon: 92
Coverage over query: 170-264   Coverage over subject: 50-148
COG5024, Cyclin [Cell division and chromosome partitioning]
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
psy17187 123 hhsearch probability: 99.16    Identity: 12%
subject length: 297   Length of aligned reigon: 107
Coverage over query: 9-116   Coverage over subject: 43-155
COG5024, Cyclin [Cell division and chromosome partitioning]
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
COG1405, SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
psy7892 240 hhsearch probability: 99.31    Identity: 17%
subject length: 297   Length of aligned reigon: 114
Coverage over query: 124-238   Coverage over subject: 41-160
COG5024, Cyclin [Cell division and chromosome partitioning]
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
COG1405, SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
psy16012 712 hhsearch probability: 99.59    Identity: 19%
subject length: 297   Length of aligned reigon: 155
Coverage over query: 243-413   Coverage over subject: 44-204
COG5024, Cyclin [Cell division and chromosome partitioning]
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
COG1405, SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
psy18159 294 hhsearch probability: 99.82    Identity: 17%
subject length: 297   Length of aligned reigon: 164
Coverage over query: 119-283   Coverage over subject: 42-213
COG5024, Cyclin [Cell division and chromosome partitioning]
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
COG1405, SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
psy14705 329 hhsearch probability: 99.37    Identity: 21%
subject length: 297   Length of aligned reigon: 149
Coverage over query: 156-308   Coverage over subject: 36-197
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
COG5024, Cyclin [Cell division and chromosome partitioning]
psy1171 181 hhsearch probability: 98.94    Identity: 22%
subject length: 297   Length of aligned reigon: 41
Coverage over query: 87-127   Coverage over subject: 169-209
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
psy7372 352 hhsearch probability: 100.00    Identity: 36%
subject length: 297   Length of aligned reigon: 170
Coverage over query: 71-246   Coverage over subject: 36-209
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
COG5024, Cyclin [Cell division and chromosome partitioning]
COG1405, SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
psy1168 229 hhsearch probability: 100.00    Identity: 37%
subject length: 297   Length of aligned reigon: 172
Coverage over query: 36-216   Coverage over subject: 36-209
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
COG5024, Cyclin [Cell division and chromosome partitioning]
COG1405, SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
psy4747 414 hhsearch probability: 99.96    Identity: 34%
subject length: 297   Length of aligned reigon: 175
Coverage over query: 60-241   Coverage over subject: 36-210
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
COG5024, Cyclin [Cell division and chromosome partitioning]
COG1405, SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
psy11273 730 hhsearch probability: 99.95    Identity: 29%
subject length: 297   Length of aligned reigon: 174
Coverage over query: 32-216   Coverage over subject: 36-211
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
COG5024, Cyclin [Cell division and chromosome partitioning]
COG1405, SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
psy2416 405 hhsearch probability: 99.97    Identity: 31%
subject length: 297   Length of aligned reigon: 175
Coverage over query: 43-230   Coverage over subject: 36-211
COG5333, CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
COG5024, Cyclin [Cell division and chromosome partitioning]
COG1405, SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]