| GOID Link to GO |
Functional Category | Description | Protein Count link to protein list |
|---|---|---|---|
| GO:0001666 | response to hypoxia | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level. | 153 |
| GO:0006979 | response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | 113 |
| GO:0006281 | DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. | 104 |
| GO:0006974 | response to DNA damage stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism. | 96 |
| GO:0030168 | platelet activation | A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug. | 87 |
| GO:0009651 | response to salt stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment. | 84 |
| GO:0009408 | response to heat | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism. | 83 |
| GO:0007596 | blood coagulation | The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers. | 74 |
| GO:0033554 | cellular response to stress | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation). | 72 |
| GO:0009409 | response to cold | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism. | 62 |
| GO:0042742 | defense response to bacterium | Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism. | 59 |
| GO:0006977 | DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest | A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the stopping or reduction in rate of the cell cycle. | 54 |
| GO:0042542 | response to hydrogen peroxide | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus. | 52 |
| GO:0045087 | innate immune response | Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. | 48 |
| GO:0007095 | mitotic G2 DNA damage checkpoint | A mitotic cell cycle checkpoint that detects and negatively regulates progression through the G2/M transition of the cell cycle in response to DNA damage. | 48 |
| GO:0006952 | defense response | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. | 46 |
| GO:0009611 | response to wounding | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism. | 45 |
| GO:0034599 | cellular response to oxidative stress | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | 43 |
| GO:0042060 | wound healing | The series of events that restore integrity to a damaged tissue, following an injury. | 43 |
| GO:0034605 | cellular response to heat | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism. | 42 |
| GO:0006972 | hyperosmotic response | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell. | 41 |
| GO:0000724 | double-strand break repair via homologous recombination | The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule. | 40 |
| GO:0030968 | endoplasmic reticulum unfolded protein response | The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation. | 37 |
| GO:0071456 | cellular response to hypoxia | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level. | 35 |
| GO:0042149 | cellular response to glucose starvation | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of glucose. | 34 |
| GO:0070301 | cellular response to hydrogen peroxide | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus. | 34 |
| GO:0042594 | response to starvation | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of nourishment. | 31 |
| GO:0009267 | cellular response to starvation | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nourishment. | 31 |
| GO:0006954 | inflammatory response | The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages. | 30 |
| GO:0006283 | transcription-coupled nucleotide-excision repair | The nucleotide-excision repair process that carries out preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the global genome nucleotide excision repair pathway. | 29 |
| GO:0000077 | DNA damage checkpoint | A cell cycle checkpoint that regulates progression through the cell cycle in response to DNA damage. A DNA damage checkpoint may blocks cell cycle progression (in G1, G2 or metaphase) or slow the rate at which S phase proceeds. | 29 |
| GO:0006986 | response to unfolded protein | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus. | 27 |
| GO:0006302 | double-strand break repair | The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix. | 27 |
| GO:0071470 | cellular response to osmotic stress | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell. | 27 |
| GO:0031101 | fin regeneration | The regrowth of fin tissue following its loss or destruction. | 26 |
| GO:0007254 | JNK cascade | An intracellular protein kinase cascade containing at least a JNK (a MAPK), a JNKK (a MAPKK) and a JUN3K (a MAP3K). The cascade can also contain two additional tiers: the upstream MAP4K and the downstream MAP Kinase-activated kinase (MAPKAPK). The kinases in each tier phosphorylate and activate the kinases in the downstream tier to transmit a signal within a cell. | 25 |
| GO:0042744 | hydrogen peroxide catabolic process | The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2). | 25 |
| GO:0006987 | activation of signaling protein activity involved in unfolded protein response | The conversion of a specific protein, possessing protein kinase and endoribonuclease activities, to an active form as a result of signaling via the unfolded protein response. | 23 |
| GO:0007257 | activation of JUN kinase activity | The initiation of the activity of the inactive enzyme JUN kinase (JNK). | 21 |
| GO:0090398 | cellular senescence | A cell aging process stimulated in response to cellular stress, whereby normal cells lose the ability to divide through irreversible cell cycle arrest. | 21 |
| GO:0034614 | cellular response to reactive oxygen species | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals. | 21 |
| GO:0050832 | defense response to fungus | Reactions triggered in response to the presence of a fungus that act to protect the cell or organism. | 20 |
| GO:0035011 | melanotic encapsulation of foreign target | Formation of a multilayered, melanized sheath of cells around a foreign invader. | 20 |
| GO:0000302 | response to reactive oxygen species | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals. | 20 |
| GO:0035080 | heat shock-mediated polytene chromosome puffing | The decondensing (loosening) and swelling of the chromosomal sites of heat shock genes on polytene chromosomes in response to a heat shock stimulus. | 19 |
| GO:0006970 | response to osmotic stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell. | 18 |
| GO:0051403 | stress-activated MAPK cascade | A series of molecular signals in which a stress-activated MAP kinase cascade relays one or more of the signals; MAP kinase cascades involve at least three protein kinase activities and culminate in the phosphorylation and activation of a MAP kinase. | 17 |
| GO:0006983 | ER overload response | The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB. | 17 |
| GO:0042769 | DNA damage response, detection of DNA damage | The series of events required to receive a stimulus indicating DNA damage has occurred and convert it to a molecular signal. | 17 |
| GO:0006995 | cellular response to nitrogen starvation | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nitrogen. | 17 |
| GO:0043403 | skeletal muscle tissue regeneration | The regrowth of skeletal muscle tissue to repair injured or damaged muscle fibers in the postnatal stage. | 16 |
| GO:0036170 | filamentous growth of a population of unicellular organisms in response to starvation | The process in which a group of unicellular organisms grow in a threadlike, filamentous shape in response to deprivation of nourishment. | 16 |
| GO:0031152 | aggregation involved in sorocarp development | The process whose specific outcome is the progression of the aggregate over time, from its formation to the point when a slug is formed. Aggregate development begins in response to starvation and continues by the chemoattractant-mediated movement of cells toward each other. The aggregate is a multicellular structure that gives rise to the slug. | 15 |
| GO:0048678 | response to axon injury | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an axon injury stimulus. | 15 |
| GO:0071346 | cellular response to interferon-gamma | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon. | 15 |
| GO:0061418 | regulation of transcription from RNA polymerase II promoter in response to hypoxia | Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hypoxia stimulus. | 15 |
| GO:0051607 | defense response to virus | Reactions triggered in response to the presence of a virus that act to protect the cell or organism. | 14 |
| GO:0070059 | intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress | A series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to a stimulus indicating endoplasmic reticulum (ER) stress, and ends when the execution phase of apoptosis is triggered. ER stress usually results from the accumulation of unfolded or misfolded proteins in the ER lumen. | 14 |
| GO:0030587 | sorocarp development | The process whose specific outcome is the progression of the sorocarp over time, from its formation to the mature structure. The process begins with the aggregation of individual cells and ends with the mature sorocarp. The sorocarp is a structure containing a spore-bearing sorus that sits on top of a stalk. An example of this process is found in Dictyostelium discoideum. | 14 |
| GO:0042770 | signal transduction in response to DNA damage | A cascade of processes induced by the detection of DNA damage within a cell. | 13 |
| GO:0006289 | nucleotide-excision repair | A DNA repair process in which a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts). | 12 |
| GO:0016236 | macroautophagy | The major inducible pathway for the general turnover of cytoplasmic constituents in eukaryotic cells, it is also responsible for the degradation of active cytoplasmic enzymes and organelles during nutrient starvation. Macroautophagy involves the formation of double-membrane-bounded autophagosomes which enclose the cytoplasmic constituent targeted for degradation in a membrane-bounded structure, which then fuse with the lysosome (or vacuole) releasing a single-membrane-bounded autophagic bodies which are then degraded within the lysosome (or vacuole). Though once thought to be a purely non-selective process, it appears that some types of macroautophagy, e.g. macropexophagy, macromitophagy, may involve selective targeting of the targets to be degraded. | 12 |
| GO:0006978 | DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator | A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, resulting in the induction of the transcription of p21 (also known as WAF1, CIP1 and SDI1) or any equivalent protein, in response to the detection of DNA damage. | 12 |
| GO:0000045 | autophagic vacuole assembly | The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm. | 12 |
| GO:0006301 | postreplication repair | The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication. Includes pathways that remove replication-blocking lesions in conjunction with DNA replication. | 12 |
| GO:0000729 | DNA double-strand break processing | The 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang. | 11 |
| GO:0042538 | hyperosmotic salinity response | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment. | 11 |
| GO:0051788 | response to misfolded protein | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a misfolded protein stimulus. | 11 |
| GO:0042267 | natural killer cell mediated cytotoxicity | The directed killing of a target cell by a natural killer cell through the release of granules containing cytotoxic mediators or through the engagement of death receptors. | 10 |
| GO:0006975 | DNA damage induced protein phosphorylation | The widespread phosphorylation of various molecules, triggering many downstream processes, that occurs in response to the detection of DNA damage. | 10 |
| GO:0042771 | intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator | A series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage, and ends when the execution phase of apoptosis is triggered. | 10 |
| GO:0070911 | global genome nucleotide-excision repair | The nucleotide-excision repair process in which DNA lesions are removed from nontranscribed strands and from transcriptionally silent regions over the entire genome. | 9 |
| GO:0006298 | mismatch repair | A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination. | 9 |
| GO:0000718 | nucleotide-excision repair, DNA damage removal | The removal of the oligonucleotide that contains the DNA damage. The oligonucleotide is formed by dual incisions that flank the site of DNA damage. | 9 |
| GO:0050830 | defense response to Gram-positive bacterium | Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism. | 9 |
| GO:0000303 | response to superoxide | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion. | 9 |
| GO:0019430 | removal of superoxide radicals | Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2). | 8 |
| GO:0019731 | antibacterial humoral response | An immune response against bacteria mediated through a body fluid. Examples of this process are the antibacterial humoral responses in Mus musculus and Drosophila melanogaster. | 8 |
| GO:0071472 | cellular response to salt stress | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment. | 8 |
| GO:0006284 | base-excision repair | In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. | 8 |
| GO:0050829 | defense response to Gram-negative bacterium | Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism. | 8 |
| GO:0042539 | hypotonic salinity response | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment. | 8 |
| GO:0042595 | behavioral response to starvation | Any process that results in a change in the behavior of an organism as a result of deprivation of nourishment. | 8 |
| GO:0055093 | response to hyperoxia | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating increased oxygen tension. | 8 |
| GO:0019985 | translesion synthesis | The replication of damaged DNA by synthesis across a lesion in the template strand; a specialized DNA polymerase or replication complex inserts a defined nucleotide across from the lesion which allows DNA synthesis to continue beyond the lesion. This process can be mutagenic depending on the damaged nucleotide and the inserted nucleotide. | 7 |
| GO:0070914 | UV-damage excision repair | A DNA repair process that is initiated by an endonuclease that introduces a single-strand incision immediately 5' of a UV-induced damage site. UV-damage excision repair acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs). | 7 |
| GO:0001778 | plasma membrane repair | The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress. | 7 |
| GO:0009631 | cold acclimation | Any process that increases freezing tolerance of an organism in response to low, nonfreezing temperatures. | 7 |
| GO:0009414 | response to water deprivation | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water. | 7 |
| GO:0070370 | cellular heat acclimation | Any process that increases heat tolerance of a cell in response to high temperatures. | 7 |
| GO:0031297 | replication fork processing | The process in which a DNA replication fork that has stalled (due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes) is repaired and replication is restarted. | 7 |
| GO:0045004 | DNA replication proofreading | Correction of replication errors by DNA polymerase using a 3'-5' exonuclease activity. | 6 |
| GO:0008627 | intrinsic apoptotic signaling pathway in response to osmotic stress | A series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to changes in intracellular ion homeostasis, and ends when the execution phase of apoptosis is triggered. | 6 |
| GO:0071732 | cellular response to nitric oxide | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitric oxide stimulus. | 6 |
| GO:0031572 | G2 DNA damage checkpoint | A cell cycle checkpoint that detects and negatively regulates progression from G2 to M phase in the cell cycle in response to DNA damage. | 6 |
| GO:0071712 | ER-associated misfolded protein catabolic process | The chemical reactions and pathways resulting in the breakdown of misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation. | 6 |
| GO:0071630 | nucleus-associated proteasomal ubiquitin-dependent protein catabolic process | The chemical reactions and pathways resulting in the breakdown of misfolded proteins via a mechanism in which the proteins are transported to the nucleus for ubiquitination, and then targeted to proteasomes for degradation. | 6 |
| GO:0031103 | axon regeneration | The regrowth of axons following their loss or damage. | 6 |
| GO:0033555 | multicellular organismal response to stress | Any process that results in a change in state or activity of a multicellular organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation). | 6 |
| GO:0070527 | platelet aggregation | The adhesion of one platelet to one or more other platelets via adhesion molecules. | 6 |
| GO:0034514 | mitochondrial unfolded protein response | The series of molecular signals generated as a consequence of the presence of unfolded proteins in the mitochondrial matrix; results in transcriptional upregulation of nuclear genes encoding mitochondrial stress proteins. | 6 |
| GO:0000046 | autophagic vacuole fusion | The fusion of an autophagic vacuole with a vacuole (yeast) or lysosome (e.g. mammals and insects). In the case of yeast, inner membrane-bounded structures (autophagic bodies) appear in the vacuole. | 6 |
| GO:0006287 | base-excision repair, gap-filling | Repair of the damaged strand by the combined action of an apurinic endouclease that degrades a few bases on the damaged strand and a polymerase that synthesizes a 'patch' in the 5' to 3' direction, using the undamaged strand as a template. | 6 |
| GO:0010998 | regulation of translational initiation by eIF2 alpha phosphorylation | Any process that activates or increases the frequency, rate or extent of translation initiation in response to stress by the phosphorylation of eIF2 alpha. | 5 |
| GO:0002553 | histamine secretion by mast cell | The regulated release of histamine by a mast cell or group of mast cells. | 5 |
| GO:0034341 | response to interferon-gamma | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon. | 5 |
| GO:0036168 | filamentous growth of a population of unicellular organisms in response to heat | The process in which a group of unicellular organisms grow in a threadlike, filamentous shape in response to an increase in temperature. | 5 |
| GO:0008631 | intrinsic apoptotic signaling pathway in response to oxidative stress | A series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, and ends when the execution phase of apoptosis is triggered. | 5 |
| GO:0009817 | defense response to fungus, incompatible interaction | A response of an organism to a fungus that prevents the occurrence or spread of disease. | 5 |
| GO:0006297 | nucleotide-excision repair, DNA gap filling | Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes. | 5 |
| GO:0000731 | DNA synthesis involved in DNA repair | Synthesis of DNA that proceeds from the broken 3' single-strand DNA end uses the homologous intact duplex as the template. | 5 |
| GO:0048265 | response to pain | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli. | 5 |
| GO:0010106 | cellular response to iron ion starvation | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of iron ions. | 5 |
| GO:0001662 | behavioral fear response | An acute behavioral change resulting from a perceived external threat. | 5 |
| GO:0043619 | regulation of transcription from RNA polymerase II promoter in response to oxidative stress | Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | 5 |
| GO:0048266 | behavioral response to pain | Any process that results in a change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli. | 5 |
| GO:0036003 | positive regulation of transcription from RNA polymerase II promoter in response to stress | Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation). | 5 |
| GO:0070417 | cellular response to cold | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism. | 4 |
| GO:0008630 | intrinsic apoptotic signaling pathway in response to DNA damage | A series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced by the detection of DNA damage, and ends when the execution phase of apoptosis is triggered. | 4 |
| GO:0060054 | positive regulation of epithelial cell proliferation involved in wound healing | Any process that activates or increases the rate or extent of epithelial cell proliferation, contributing to the restoration of integrity to a damaged tissue following an injury. | 4 |
| GO:0034620 | cellular response to unfolded protein | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus. | 4 |
| GO:0060333 | interferon-gamma-mediated signaling pathway | A series of molecular signals initiated by the binding of interferon-gamma to a receptor on the surface of a cell, and ending with regulation of a downstream cellular process, e.g. transcription. | 4 |
| GO:0007256 | activation of JNKK activity | The initiation of the activity of the inactive enzyme JUN kinase kinase (JNKK) activity. JNKKs are involved in a signaling pathway that is primarily activated by cytokines and exposure to environmental stress. | 4 |
| GO:0006303 | double-strand break repair via nonhomologous end joining | The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends. | 4 |
| GO:0034198 | cellular response to amino acid starvation | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of amino acids. | 4 |
| GO:0000305 | response to oxygen radical | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen radical stimulus. An oxygen radical is any oxygen species that carries a free electron; examples include hydroxyl radicals and the superoxide anion. | 4 |
| GO:0034976 | response to endoplasmic reticulum stress | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating endoplasmic reticulum (ER) stress. ER stress usually results from the accumulation of unfolded or misfolded proteins in the ER lumen. | 4 |
| GO:0014834 | satellite cell maintenance involved in skeletal muscle regeneration | The process essential to maintain a ready source of satellite cells. It consists of the return of activated satellite cells to a quiescent state after proliferation to replenish the satellite cell pool. Satellite cells are quiescent cells that are located between the basal lamina and the plasmalemma of the muscle fiber, which are the main contributors to postnatal muscle growth. In adult muscle, satellite cells become activated to divide and differentiate in response to muscle damage. | 4 |
| GO:0035006 | melanization defense response | The blackening of the wounded area of the cuticle or the surface of invading pathogens, parasites or parasitoids, resulting from a proteolytic cascade leading to the de novo synthesis and deposition of melanin. | 4 |
| GO:0000719 | photoreactive repair | The repair of UV-induced T-T, C-T and C-C dimers by directly reversing the damage to restore the original pyrimidines. | 4 |
| GO:0071474 | cellular hyperosmotic response | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell. | 4 |
| GO:0035313 | wound healing, spreading of epidermal cells | The migration of an epidermal cell along or through a wound gap that contributes to the reestablishment of a continuous epidermis. | 4 |
| GO:0033683 | nucleotide-excision repair, DNA incision | A process that results in the endonucleolytic cleavage of the damaged strand of DNA. The incision occurs at the junction of single-stranded DNA and double-stranded DNA that is formed when the DNA duplex is unwound. | 4 |
| GO:0000706 | meiotic DNA double-strand break processing | The cell cycle process in which the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang occurs. This takes place during meiosis. | 4 |
| GO:0002931 | response to ischemia | Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a inadequate blood supply. | 4 |
| GO:0031571 | mitotic G1 DNA damage checkpoint | A mitotic cell cycle checkpoint that detects and negatively regulates progression through the G1/S transition of the cell cycle in response to DNA damage. | 4 |
| GO:0042276 | error-prone translesion synthesis | The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication by using a specialized DNA polymerase or replication complex to insert a defined nucleotide across the lesion. This process does not remove the replication-blocking lesions and causes an increase in the endogenous mutation level. For example, in E. coli, a low fidelity DNA polymerase, pol V, copies lesions that block replication fork progress. This produces mutations specifically targeted to DNA template damage sites, but it can also produce mutations at undamaged sites. | 4 |
| GO:0042246 | tissue regeneration | The regrowth of lost or destroyed tissues. | 3 |
| GO:0071629 | cytoplasm-associated proteasomal ubiquitin-dependent protein catabolic process | The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the cytoplasm, which are targeted to cytoplasmic proteasomes for degradation. | 3 |
| GO:0031098 | stress-activated protein kinase signaling cascade | A series of molecular signals in which a stress-activated protein kinase (SAPK) cascade relays one or more of the signals. | 3 |
| GO:0031142 | induction of conjugation upon nitrogen starvation | The process in which a cell initiates conjugation with cellular fusion upon nitrogen starvation. | 3 |
| GO:0071451 | cellular response to superoxide | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion. | 3 |
| GO:0006973 | intracellular accumulation of glycerol | The accumulation of glycerol within a cell, for example by increased glycerol biosynthesis combined with decreased permeability of the cell membrane to glycerol, in response to the detection of a hyperosmotic environment. | 3 |
| GO:0035659 | Wnt receptor signaling pathway involved in wound healing, spreading of epidermal cells | The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of a cell in the epidermis that contributes to the migration of an epidermal cell along or through a wound gap to reestablish a continuous epidermis. | 3 |
| GO:0010768 | negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage | Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a UV damage stimulus. | 3 |
| GO:0042275 | error-free postreplication DNA repair | The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA via processes such as template switching, which does not remove the replication-blocking lesions and but does not increase the endogenous mutation rate. | 3 |
| GO:0071475 | cellular hyperosmotic salinity response | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment. | 3 |
| GO:0070321 | regulation of translation in response to nitrogen starvation | Any process that modulates the frequency, rate or extent of the frequency, rate or extent of translation as a result of a stimulus indicating deprivation of nitrogen. | 3 |
| GO:0071471 | cellular response to non-ionic osmotic stress | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of non-ionic solutes (e.g. mannitol, sorbitol) in the environment. | 3 |
| GO:0002236 | detection of misfolded protein | The series of events in which a misfolded protein stimulus is received and converted into a molecular signal. | 3 |
| GO:0071218 | cellular response to misfolded protein | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a misfolded protein stimulus. | 3 |
| GO:0034059 | response to anoxia | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating a decline in oxygen levels to trace amounts, <0.1%. | 3 |
| GO:0009970 | cellular response to sulfate starvation | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of sulfate. | 3 |
| GO:0001306 | age-dependent response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, where the change varies according to the age of the cell or organism. | 3 |
| GO:0042262 | DNA protection | Any process in which DNA is protected from damage by, for example, oxidative stress. | 3 |
| GO:0030996 | cell cycle arrest in response to nitrogen starvation | The process in which the cell cycle is halted during one of the normal phases (G1, S, G2, M) as a result of deprivation of nitrogen. | 3 |
| GO:0010193 | response to ozone | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ozone stimulus. | 3 |
| GO:0006968 | cellular defense response | A defense response that is mediated by cells. | 3 |
| GO:0016036 | cellular response to phosphate starvation | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of phosphate. | 2 |
| GO:0071477 | cellular hypotonic salinity response | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment. | 2 |
| GO:0071473 | cellular response to cation stress | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of cation stress, an increase or decrease in the concentration of positively charged ions in the environment. | 2 |
| GO:0014898 | cardiac muscle hypertrophy in response to stress | The physiological enlargement or overgrowth of all or part of the heart muscle due to an increase in size (not length) of individual cardiac muscle fibers, without cell division, as a result of a disturbance in organismal or cellular homeostasis. | 2 |
| GO:0000727 | double-strand break repair via break-induced replication | The error-free repair of a double-strand break in DNA in which the centromere-proximal end of a broken chromosome searches for a homologous region in an intact chromosome. DNA synthesis initiates from the 3' end of the invading DNA strand, using the intact chromosome as the template, and progresses to the end of the chromosome. | 2 |
| GO:0071476 | cellular hypotonic response | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hypotonic environment, i.e. an environment with a lower concentration of solutes than the organism or cell. | 2 |
| GO:0000717 | nucleotide-excision repair, DNA duplex unwinding | The unwinding, or local denaturation, of the DNA duplex to create a bubble around the site of the DNA damage. | 2 |
| GO:0045003 | double-strand break repair via synthesis-dependent strand annealing | SDSA is a major mechanism of double-strand break repair in mitosis which allows for the error-free repair of a double-strand break without the exchange of adjacent sequences. The broken DNA searches for and base pairs with a homologous region in an intact chromosome. DNA synthesis initiates from the 3' end of the invading DNA strand, using the intact chromosome as the template. Newly synthesized DNA is then displaced from the template and anneal with its complement on the other side of the double-strand break. | 2 |
| GO:0002437 | inflammatory response to antigenic stimulus | An inflammatory response to an antigenic stimulus, which can be include any number of T cell or B cell epitopes. | 2 |
| GO:0002213 | defense response to insect | A response to protect an organism from a directly detected or perceived external threat from an insect or insects to that organism. | 2 |
| GO:0006296 | nucleotide-excision repair, DNA incision, 5'-to lesion | The endonucleolytic cleavage of the damaged strand of DNA 5' to the site of damage. The incision occurs at the junction of single-stranded DNA and double-stranded DNA that is formed when the DNA duplex is unwound. The incision follows the incision formed 3' to the site of damage. | 2 |
| GO:0090400 | stress-induced premature senescence | A cellular senescence process associated with the dismantling of a cell as a response to environmental factors such as hydrogen peroxide or X-rays. | 2 |
| GO:0035103 | sterol regulatory element binding protein cleavage | The proteolytic release of a transcriptionally active sterol regulatory element binding protein (SREBP) from intracellular membranes, freeing it to move to the nucleus to upregulate transcription of target genes, in response to altered levels of one or more lipids. | 2 |
| GO:0071457 | cellular response to ozone | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ozone stimulus. | 2 |
| GO:0031154 | culmination involved in sorocarp development | The process whose specific outcome is the progression of the culminant over time, from its formation to the mature structure. Culmination begins with a morphogenetic change of the finger-like or migratory slug giving rise to an organized structure containing a stalk and a sorus. This process is the final stage of sorocarp development. | 2 |
| GO:0006288 | base-excision repair, DNA ligation | The ligation by DNA ligase of DNA strands. Ligation occurs after polymerase action to fill the gap left by the action of endonucleases during base-excision repair. | 2 |
| GO:0061419 | positive regulation of transcription from RNA polymerase II promoter in response to hypoxia | Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hypoxia stimulus. | 2 |
| GO:0048674 | collateral sprouting of injured axon | The process resulting in reformation of a growth cone by the tip of an injured axon, or in collateral sprouting of the axon. Collateral sprouting is the process in which outgrowths develop from the shafts of existing axons. | 2 |
| GO:0060337 | type I interferon-mediated signaling pathway | A series of molecular signals initiated by the binding of a type I interferon binding to a receptor on the surface of a cell, and ending with regulation of a downstream cellular process, e.g. transcription. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families. | 2 |
| GO:0043558 | regulation of translational initiation in response to stress | Any process that activates or increases the frequency, rate or extent of translation initiation, as a result of a stimulus indicating the organism is under stress. | 2 |
| GO:1990046 | stress-induced mitochondrial fusion | Merging of two or more mitochondria within a cell to form a single compartment, as a result of a disturbance in cellular homeostasis. | 2 |
| GO:0001320 | age-dependent response to reactive oxygen species involved in chronological cell aging | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring in non-dividing cells as they age as a result of reactive oxygen species, where the change varies according to the age of the cell or organism. | 2 |
| GO:0007258 | JUN phosphorylation | The process of introducing a phosphate group into a JUN protein. | 2 |
| GO:0070987 | error-free translesion synthesis | The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication by using a specialized DNA polymerase or replication complex to insert a defined nucleotide across the lesion. This process does not remove the replication-blocking lesions but does not causes an increase in the endogenous mutation level. For S. cerevisiae, RAD30 encodes DNA polymerase eta, which incorporates two adenines. When incorporated across a thymine-thymine dimer, it does not increase the endogenous mutation level. | 2 |
| GO:0052059 | evasion or tolerance by symbiont of host-produced reactive oxygen species | The process in which an organism avoids the effects of reactive oxygen species produced as a defense response by the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction. | 2 |
| GO:0006953 | acute-phase response | An acute inflammatory response that involves non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals. | 2 |
| GO:0007231 | osmosensory signaling pathway | The series of molecular signals initiated in response to osmotic change. | 2 |
| GO:0010048 | vernalization response | The process of thermal induction in plants in which flowering is promoted by exposure to low temperatures. | 2 |
| GO:0032933 | SREBP signaling pathway | A series of molecular signals from the endoplasmic reticulum to the nucleus generated as a consequence of decreased levels of one or more sterols (and in some yeast, changes in oxygen levels) and which proceeds through activation of a sterol response element binding transcription factor (SREBP) to result in up-regulation of target gene transcription. | 2 |
| GO:0030330 | DNA damage response, signal transduction by p53 class mediator | A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage. | 2 |
| GO:0009269 | response to desiccation | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a desiccation stimulus, extreme dryness resulting from the prolonged deprivation of water. | 2 |
| GO:0010286 | heat acclimation | Any process that increases heat tolerance of an organism in response to high temperatures. | 2 |
| GO:0071449 | cellular response to lipid hydroperoxide | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid hydroperoxide stimulus. Lipid hydroperoxide is the highly reactive primary oxygenated products of polyunsaturated fatty acids. | 2 |
| GO:0009862 | systemic acquired resistance, salicylic acid mediated signaling pathway | The series of molecular signals mediated by salicylic acid involved in systemic acquired resistance. | 2 |
| GO:0070458 | cellular detoxification of nitrogen compound | Any cellular process that reduces or removes the toxicity of nitrogenous compounds which are dangerous or toxic. This includes the aerobic conversion of toxic compounds to harmless substances. | 2 |
| GO:0006285 | base-excision repair, AP site formation | The formation of an AP site, a deoxyribose sugar with a missing base, by DNA glycosylase which recognizes an altered base in DNA and catalyzes its hydrolytic removal. This sugar phosphate is the substrate recognized by the AP endonuclease, which cuts the DNA phosphodiester backbone at the 5' side of the altered site to leave a gap which is subsequently repaired. | 1 |
| GO:0007597 | blood coagulation, intrinsic pathway | A protein activation cascade that contributes to blood coagulation and consists of the interactions among high molecular weight kininogen, prekallikrein, and factor XII that lead to the activation of clotting factor X. | 1 |
| GO:0006307 | DNA dealkylation involved in DNA repair | The repair of alkylation damage, e.g. the removal of the alkyl group at the O6-position of guanine by O6-alkylguanine-DNA alkyltransferase (AGT). | 1 |
| GO:0034616 | response to laminar fluid shear stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a laminar fluid shear stress stimulus. Laminar fluid flow is the force acting on an object in a system where the fluid is moving across a solid surface in parallel layers. As an example, laminar shear stress can be seen where blood flows against the luminal side of blood vessel walls. | 1 |
| GO:0015968 | stringent response | A specific global change in the metabolism of a bacterial cell (the downregulation of nucleic acid and protein synthesis, and the simultaneous upregulation of protein degradation and amino acid synthesis) as a result of starvation. | 1 |
| GO:0070654 | sensory epithelium regeneration | The regrowth of a sensory epithelium following its loss or destruction. | 1 |
| GO:0019732 | antifungal humoral response | An immune response against a fungus mediated through a body fluid. An example of this process is the antifungal humoral response in Drosophila melanogaster. | 1 |
| GO:0002526 | acute inflammatory response | Inflammation which comprises a rapid, short-lived, relatively uniform response to acute injury or antigenic challenge and is characterized by accumulations of fluid, plasma proteins, and granulocytic leukocytes. An acute inflammatory response occurs within a matter of minutes or hours, and either resolves within a few days or becomes a chronic inflammatory response. | 1 |
| GO:0033194 | response to hydroperoxide | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydroperoxide stimulus. Hydroperoxides are monosubstitution products of hydrogen peroxide, HOOH. | 1 |
| GO:0014822 | detection of wounding | The series of events by which an injury stimulus is received and converted into a molecular signal. | 1 |
| GO:0002536 | respiratory burst involved in inflammatory response | A phase of elevated metabolic activity, during which oxygen consumption increases following a stimulus as part of an inflammatory response; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals, resulting in an increase in their intracellular or extracellular levels. | 1 |
| GO:0043150 | DNA synthesis involved in double-strand break repair via homologous recombination | The synthesis of DNA that contributes to the process of double-strand break repair via homologous recombination. | 1 |
| GO:0097411 | hypoxia-inducible factor-1alpha signaling pathway | A series of molecular signals mediated by hypoxia-inducible factor (HIF1) in response to lowered oxygen levels (hypoxia). Under hypoxic conditions, the oxygen-sensitive alpha-subunit of hypoxia-inducible factor (HIF)-1 dimerizes with a HIF1-beta subunit (also called ARNT or aryl-hydrocarbon-receptor nuclear translocator), translocates to the nucleus and activates transcription of genes whose products participate in responding to hypoxia. | 1 |
| GO:0009432 | SOS response | An error-prone process for repairing damaged microbial DNA. | 1 |
| GO:0000725 | recombinational repair | A DNA repair process that involves the exchange, reciprocal or nonreciprocal, of genetic material between the broken DNA molecule and a homologous region of DNA. | 1 |
| GO:0035967 | cellular response to topologically incorrect protein | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein that is not folded in its correct three-dimensional structure. | 1 |
| GO:0060055 | angiogenesis involved in wound healing | Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to a damaged tissue, following an injury. | 1 |
| GO:0035966 | response to topologically incorrect protein | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein that is not folded in its correct three-dimensional structure. | 1 |
| GO:0050831 | male-specific defense response to bacterium | A set of reactions, specific to males, that are triggered in response to the presence of a bacterium that act to protect the cell or organism. | 1 |
| GO:0010792 | DNA double-strand break processing involved in repair via single-strand annealing | The 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang that results in the repair of a double strand break via single-strand annealing. | 1 |
| GO:0043247 | telomere maintenance in response to DNA damage | Any process that occur in response to the presence of critically short telomeres. | 1 |
| GO:0042381 | hemolymph coagulation | Any process in which factors in the hemolymph (the invertebrate equivalent of vertebrate blood and lymph) precipitate into insoluble clots in order to prevent loss of body fluid, and at the same time prevent the movement of microbes. Hemolymph coagulation is also part of the invertebrate humoral immune response. | 1 |
| GO:0048677 | axon extension involved in regeneration | Long distance growth of a single axon process involved in regeneration of the neuron. | 1 |
| GO:0002255 | tissue kallikrein-kinin cascade | A series of reactions that takes place outside the cell initiated by the action of tissue (glandular) kallikreins on low molecular weight kininogen in response to tissue damage. Tissue kallikreins are present in glandular tissues and their fluids, such as the salivary glands, sweat glands, pancreas, and kidney. The ultimate products of the tissue kallikrein-kinin cascade include kallidin and bradykinin, agents known to induce smooth muscle contraction, vasoconstriction, and increased vascular permeability. | 1 |
| GO:0061428 | negative regulation of transcription from RNA polymerase II promoter in response to hypoxia | Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hypoxia stimulus. | 1 |
| GO:0051409 | response to nitrosative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrosative stress stimulus. Nitrosative stress is a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions. | 1 |
| GO:0031288 | sorocarp morphogenesis | The process in which the sorocarp is generated and organized. An example of this process is found in Dictyostelium discoideum. | 1 |
| GO:0002227 | innate immune response in mucosa | Any process of the innate immune response that takes place in the mucosal tissues. | 1 |
| GO:0042832 | defense response to protozoan | Reactions triggered in response to the presence of a protozoan that act to protect the cell or organism. | 1 |
| GO:0002532 | production of molecular mediator involved in inflammatory response | The synthesis or release of any molecular mediator of the inflammatory response following an inflammatory stimulus, resulting in an increase in its intracellular or extracellular levels. | 1 |
| GO:0009635 | response to herbicide | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a herbicide stimulus. Herbicides are chemicals used to kill or control the growth of plants. | 1 |
| GO:0045002 | double-strand break repair via single-strand annealing | Repair of a DSB made between two repeated sequences oriented in the same direction occurs primarily by the single strand annealing pathway. The ends of the break are processed by a 5' to 3' exonuclease, exposing complementary single-strand regions of the direct repeats that can anneal, resulting in a deletion of the unique DNA between the direct repeats. | 1 |
| GO:0001806 | type IV hypersensitivity | An inflammatory response driven by T cell recognition of processed soluble or cell-associated antigens leading to cytokine release and leukocyte activation. | 1 |
| GO:0071499 | cellular response to laminar fluid shear stress | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a laminar fluid shear stress stimulus. Laminar fluid flow is the force acting on an object in a system where the fluid is moving across a solid surface in parallel layers. | 1 |
| GO:0042596 | fear response | The response of an organism to a perceived external threat. | 1 |
| GO:0043320 | natural killer cell degranulation | The regulated exocytosis of secretory granules containing preformed mediators such as perforin and granzymes by a natural killer cell. | 1 |
| GO:0000711 | meiotic DNA repair synthesis | During meiosis, the synthesis of DNA proceeding from the broken 3' single-strand DNA end that uses the homologous intact duplex as the template. | 1 |
| GO:0052060 | evasion or tolerance by symbiont of host-produced nitric oxide | The process in which an organism avoids the effects of nitric oxide produced as a defense response by the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction. | 1 |
| GO:0002439 | chronic inflammatory response to antigenic stimulus | A chronic inflammatory response to an antigenic stimulus. A chronic inflammatory response persists indefinitely during days, weeks, or months in the life of an individual. | 1 |
| GO:0014012 | peripheral nervous system axon regeneration | The regrowth of axons outside the central nervous system (outside the brain and spinal cord) following an axonal injury. | 1 |
| GO:0009868 | jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway | The series of molecular signals mediated by jasmonic acid involved in jasmonic acid/ethylene (ethene) dependent systemic resistance. | 1 |
| GO:0006971 | hypotonic response | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hypotonic environment, i.e. an environment with a lower concentration of solutes than the organism or cell. | 1 |
| GO:0016243 | regulation of autophagic vacuole size | Any process that modulates the size of the autophagic vacuole. | 1 |
| GO:0071731 | response to nitric oxide | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitric oxide stimulus. | 1 |
| GO:0043504 | mitochondrial DNA repair | The process of restoring mitochondrial DNA after damage. | 1 |
| GO:0061042 | vascular wound healing | Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature. | 1 |
| GO:0035314 | scab formation | Formation of hardened covering (a scab) at a wound site. The scab has multiple functions including limiting blood loss, providing structural stability to the wound and guarding against infection. | 1 |
| GO:0080136 | priming of cellular response to stress | The process that enables cells to respond in a more rapid and robust manner than nonprimed cells to much lower levels of a stimulus indicating the organism is under stress. | 1 |
| GO:0051103 | DNA ligation involved in DNA repair | The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase, that contributes to DNA repair. | 1 |